RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OTUD5 (Homo sapiens)

Ensembl gene IDs: ENSG00000068308

Ensembl transcript IDs: ENST00000156084.8, ENST00000376488.8, ENST00000396743.7, ENST00000428668.2, ENST00000455452.5, ENST00000481142.1, ENST00000484499.5, ENST00000610466.4

Found 602 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACTCCAGGCCCCCAGACAGACCCTGCTGGAGAGCATTCACACCTCTaGGGTCAAGCCAAGGTCCGTGCCATTGCATCCTCTGCCCAGAGG +
Preference number: 1 (lower is better)
Translates to: TPGPQTDPAGEHSHL*GQAKVRAIASSAQR
Trigger: CCTCTGGGCAGAGGATGCAATGGCACGGACCTTGGCTTGACCTCAGAGGTGTGAATGCTCTCCAGCAGGGTCTGTCTGGGGGCCTGGAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
3UTR CCA 90 bp CTCTGTCTGAATGTCTCTCTCCTCTGGGGCTGCCTGGCTGCCAGTTaGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCC +
Preference number: 1 (lower is better)
Translates to: LCLNVSLLWGCLAAS*SVSVCLLSIFGTLA
Trigger: GGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTGGCAGCCAGGCAGCCCCAGAGGAGAGAGACATTCAGACAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
3UTR CCA 90 bp ATGAGGGGCAGGGAGACTTTCCTCTGTCTGAATGTCTCTCTCCTCTaGGGCTGCCTGGCTGCCAGTTGGTCTGTCTCTGTGTGCCTCTTG +
Preference number: 1 (lower is better)
Translates to: MRGRETFLCLNVSLL*GCLAASWSVSVCLL
Trigger: CAAGAGGCACACAGAGACAGACCAACTGGCAGCCAGGCAGCCCCAGAGGAGAGAGACATTCAGACAGAGGAAAGTCTCCCTGCCCCTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
3UTR GCA 90 bp GACTTTCCTCTGTCTGAATGTCTCTCTCCTCTGGGGCTGCCTGGCTaGCAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCAC +
Preference number: 1 (lower is better)
Translates to: DFPLSECLSPLGLPG*QLVCLCVPLVYLRH
Trigger: GTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTGGCAGCCAGGCAGCCCCAGAGGAGAGAGACATTCAGACAGAGGAAAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
3UTR CCA 90 bp AGCAGCAAATCAAATACAAACTCCAGGCCCCCAGACAGACCCTGCTaGAGAGCATTCACACCTCTGAGGTCAAGCCAAGGTCCGTGCCAT +
Preference number: 1 (lower is better)
Translates to: SSKSNTNSRPPDRPC*RAFTPLRSSQGPCH
Trigger: ATGGCACGGACCTTGGCTTGACCTCAGAGGTGTGAATGCTCTCCAGCAGGGTCTGTCTGGGGGCCTGGAGTTTGTATTTGATTTGCTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
3UTR GCA 90 bp ATAAGCAGCAAATCAAATACAAACTCCAGGCCCCCAGACAGACCCTaGTGGAGAGCATTCACACCTCTGAGGTCAAGCCAAGGTCCGTGC +
Preference number: 1 (lower is better)
Translates to: ISSKSNTNSRPPDRP*WRAFTPLRSSQGPC
Trigger: GCACGGACCTTGGCTTGACCTCAGAGGTGTGAATGCTCTCCAGCAGGGTCTGTCTGGGGGCCTGGAGTTTGTATTTGATTTGCTGCTTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
3UTR-3UTR CCA 90 bp GCCCTGCCCTTGCCCAGTGCACACCCTAGACCCTGGGCCGGCCTCCATGCAGCTAATGTCTCTCTCCTCTaGGGCTGCCTGGCTGCCAGT +
Preference number: 2 (lower is better)
Translates to: ALPLPSAHPRPWAGLHAANVSLL*GCLAAS
Trigger: ACTGGCAGCCAGGCAGCCCCAGAGGAGAGAGACATT...AGCTGCATGGAGGCCGGCCCAGGGTCTAGGGTGTGCACTGGGCAAGGGCAGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
3UTR-3UTR GCA 90 bp GGTCAGGGTTTCATTGTCCAAGCCGGCCTGACACCTGCCGCCCTGCCCTTGCCCCTGGGGCTGCCTGGCTaGCAGTTGGTCTGTCTCTGT +
Preference number: 2 (lower is better)
Translates to: GQGFIVQAGLTPAALPLPLGLPG*QLVCLC
Trigger: ACAGAGACAGACCAACTGGCAGCCAGGCAGCCCCAG...GGGCAAGGGCAGGGCGGCAGGTGTCAGGCCGGCTTGGACAATGAAACCCTGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
3UTR-3UTR GCA 90 bp GGTCAGGGTTTCATTGTCCAAGCCGGCCTGACACCTGCCGCCCTGCCCTTGCCCCCATGCCCCATGGCCTaGCTGCCCAGAAAGATGCCA +
Preference number: 2 (lower is better)
Translates to: GQGFIVQAGLTPAALPLPPCPMA*LPRKMP
Trigger: TGGCATCTTTCTGGGCAGGCAGGCCATGGGGCATGG...GGGCAAGGGCAGGGCGGCAGGTGTCAGGCCGGCTTGGACAATGAAACCCTGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
3UTR-3UTR CCA 90 bp GCCCTGCCCTTGCCCAGTGCACACCCTAGACCCTGGGCCGGCCTCCATGCAGCTTGTGGAATGCAGGGATaGTTCTGTGCGGGATGGGGT +
Preference number: 2 (lower is better)
Translates to: ALPLPSAHPRPWAGLHAACGMQG*FCAGWG
Trigger: ACCCCATCCCGCACAGAACCATCCCTGCATTCCACA...AGCTGCATGGAGGCCGGCCCAGGGTCTAGGGTGTGCACTGGGCAAGGGCAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156084.8
ENST00000376488.8
3UTR-3UTR CCA 90 bp GGTCAGGGTTTCATTGTCCAAGCCGGCCTGACACCTGCCGCCCTGCCCTTGCCCCCGAGTCCCTGGGGTTaGGAGATGGTGTCCAATCCC +
Preference number: 2 (lower is better)
Translates to: GQGFIVQAGLTPAALPLPPSPWG*EMVSNP
Trigger: GGGATTGGACACCATCTCCCAACCCCAGGGACTCGG...GGGCAAGGGCAGGGCGGCAGGTGTCAGGCCGGCTTGGACAATGAAACCCTGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396743.7
ENST00000455452.5
3UTR-3UTR CCA 90 bp CAGGGTTTCATTGTCCAAGCCGGCCTGACACCTGCCGCCCTGCCCTTGCCCAGTTCCTCTGGGGCTGCCTaGCTGCCAGTTGGTCTGTCT +
Preference number: 2 (lower is better)
Translates to: QGFIVQAGLTPAALPLPSSSGAA*LPVGLS
Trigger: AGACAGACCAACTGGCAGCCAGGCAGCCCCAGAGGA...ACTGGGCAAGGGCAGGGCGGCAGGTGTCAGGCCGGCTTGGACAATGAAACCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
3UTR-3UTR CCA 90 bp GCCCTGCCCTTGCCCAGTGCACACCCTAGACCCTGGGCCGGCCTCCATGCAGCTAGGCTCAGACGTTCTTaGGGGTACTGGGAAGGGAAA +
Preference number: 2 (lower is better)
Translates to: ALPLPSAHPRPWAGLHAARLRRS*GYWEGK
Trigger: TTTCCCTTCCCAGTACCCCCAAGAACGTCTGAGCCT...AGCTGCATGGAGGCCGGCCCAGGGTCTAGGGTGTGCACTGGGCAAGGGCAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
3UTR-3UTR CCA 90 bp CCATCTGCCAAGGCTGCTCCCACACTCCCTACACTCAAATCCCGGGTGGCAGCCCCTTGCCCGAGTCCCTaGGGTTGGGAGATGGTGTCC +
Preference number: 2 (lower is better)
Translates to: PSAKAAPTLPTLKSRVAAPCPSP*GWEMVS
Trigger: GGACACCATCTCCCAACCCCAGGGACTCGGGCAAGG...GGCTGCCACCCGGGATTTGAGTGTAGGGAGTGTGGGAGCAGCCTTGGCAGATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396743.7
ENST00000455452.5
3UTR CAA 90 bp CTCTGGGGCTGCCTGGCTGCCAGTTGGTCTGTCTCTGTGTGCCTCTaGTCTATCTTCGGCACCCTTGCCCGAGTCCCTGGGGTTGGGAGA +
Preference number: 2 (lower is better)
Translates to: LWGCLAASWSVSVCL*SIFGTLARVPGVGR
Trigger: TCTCCCAACCCCAGGGACTCGGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTGGCAGCCAGGCAGCCCCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396743.7
ENST00000455452.5
3UTR-3UTR GCA 90 bp TCAGGGTTTCATTGTCCAAGCCGGCCTGACACCTGCCGCCCTGCCCTTGCCCAGGAGTCCCCTGTGGAATaGAGGGATGGTTCTGTGCGG +
Preference number: 2 (lower is better)
Translates to: SGFHCPSRPDTCRPALAQESPVE*RDGSVR
Trigger: CCGCACAGAACCATCCCTGCATTCCACAGGGGACTC...CTGGGCAAGGGCAGGGCGGCAGGTGTCAGGCCGGCTTGGACAATGAAACCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156084.8
ENST00000376488.8
3UTR-3UTR GCA 90 bp ACGGGTGCCCCATCTGCCAAGGCTGCTCCCACACTCCCTACACTCAAATCCCGGCTGGGGCTGCCTGGCTaGCAGTTGGTCTGTCTCTGT +
Preference number: 2 (lower is better)
Translates to: TGAPSAKAAPTLPTLKSRLGLPG*QLVCLC
Trigger: ACAGAGACAGACCAACTGGCAGCCAGGCAGCCCCAG...CCGGGATTTGAGTGTAGGGAGTGTGGGAGCAGCCTTGGCAGATGGGGCACCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
3UTR-3UTR GCA 90 bp CCATCTGCCAAGGCTGCTCCCACACTCCCTACACTCAAATCCCGGGTGGCAGCCCCATGCCCCATGGCCTaGCTGCCCAGAAAGATGCCA +
Preference number: 2 (lower is better)
Translates to: PSAKAAPTLPTLKSRVAAPCPMA*LPRKMP
Trigger: TGGCATCTTTCTGGGCAGGCAGGCCATGGGGCATGG...GGCTGCCACCCGGGATTTGAGTGTAGGGAGTGTGGGAGCAGCCTTGGCAGATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
3UTR-3UTR CCA 90 bp CAGGGTTTCATTGTCCAAGCCGGCCTGACACCTGCCGCCCTGCCCTTGCCCAGTAATGTCTCTCTCCTCTaGGGCTGCCTGGCTGCCAGT +
Preference number: 2 (lower is better)
Translates to: QGFIVQAGLTPAALPLPSNVSLL*GCLAAS
Trigger: ACTGGCAGCCAGGCAGCCCCAGAGGAGAGAGACATT...ACTGGGCAAGGGCAGGGCGGCAGGTGTCAGGCCGGCTTGGACAATGAAACCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
3UTR-3UTR CCA 90 bp GCCCTGCCCTTGCCCAGTGCACACCCTAGACCCTGGGCCGGCCTCCATGCAGCTCGTTCTTGGGGGTACTaGGAAGGGAAATTTCCCACT +
Preference number: 2 (lower is better)
Translates to: ALPLPSAHPRPWAGLHAARSWGY*EGKFPT
Trigger: AGTGGGAAATTTCCCTTCCCAGTACCCCCAAGAACG...AGCTGCATGGAGGCCGGCCCAGGGTCTAGGGTGTGCACTGGGCAAGGGCAGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
3UTR-3UTR CCA 90 bp CCATCTGCCAAGGCTGCTCCCACACTCCCTACACTCAAATCCCGGGTGGCAGCCCGGCCTCCATGCAGCTaGAGGCCAGAAGACAGCAAC +
Preference number: 2 (lower is better)
Translates to: PSAKAAPTLPTLKSRVAARPPCS*RPEDSN
Trigger: GTTGCTGTCTTCTGGCCTCCAGCTGCATGGAGGCCG...GGCTGCCACCCGGGATTTGAGTGTAGGGAGTGTGGGAGCAGCCTTGGCAGATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
3UTR-3UTR GCA 90 bp TCAGGGTTTCATTGTCCAAGCCGGCCTGACACCTGCCGCCCTGCCCTTGCCCAGTATCTTCGGCACCCTTaGCCGAGTCCCCTGTGGAAT +
Preference number: 2 (lower is better)
Translates to: SGFHCPSRPDTCRPALAQYLRHP*PSPLWN
Trigger: ATTCCACAGGGGACTCGGGCAAGGGTGCCGAAGATA...CTGGGCAAGGGCAGGGCGGCAGGTGTCAGGCCGGCTTGGACAATGAAACCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156084.8
ENST00000376488.8
3UTR-3UTR TCA 90 bp GGTCAGGGTTTCATTGTCCAAGCCGGCCTGACACCTGCCGCCCTGCCCTTGCCCAGACTTTCCTCTGTCTaGATGTCTCTCTCCTCTGGG +
Preference number: 2 (lower is better)
Translates to: GQGFIVQAGLTPAALPLPRLSSV*MSLSSG
Trigger: CCCAGAGGAGAGAGACATTCAGACAGAGGAAAGTCT...GGGCAAGGGCAGGGCGGCAGGTGTCAGGCCGGCTTGGACAATGAAACCCTGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
3UTR-3UTR GCA 90 bp CCATCTGCCAAGGCTGCTCCCACACTCCCTACACTCAAATCCCGGGTGGCAGCCTATCTTCGGCACCCTTaGCCGAGTCCCCTGTGGAAT +
Preference number: 2 (lower is better)
Translates to: PSAKAAPTLPTLKSRVAAYLRHP*PSPLWN
Trigger: ATTCCACAGGGGACTCGGGCAAGGGTGCCGAAGATA...GGCTGCCACCCGGGATTTGAGTGTAGGGAGTGTGGGAGCAGCCTTGGCAGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156084.8
ENST00000376488.8
3UTR-3UTR GCA 90 bp TCAGGGTTTCATTGTCCAAGCCGGCCTGACACCTGCCGCCCTGCCCTTGCCCAGAGCAACCCATATCTTTaGACCCTCCTCCATGCCCCA +
Preference number: 2 (lower is better)
Translates to: SGFHCPSRPDTCRPALAQSNPYL*TLLHAP
Trigger: TGGGGCATGGAGGAGGGTGCAAAGATATGGGTTGCT...CTGGGCAAGGGCAGGGCGGCAGGTGTCAGGCCGGCTTGGACAATGAAACCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
3UTR-3UTR CCA 90 bp ACAAACTCCAGGCCCCCAGACAGACCCTGCTGGAGAGCATTCACACCTCTGAGGGAGAGAGTGCAGGGGTaGGCTAGCCAGAGGGAAGTG +
Preference number: 2 (lower is better)
Translates to: TNSRPPDRPCWRAFTPLRERVQG*ASQREV
Trigger: CACTTCCCTCTGGCTAGCCCACCCCTGCACTCTCTC...CCTCAGAGGTGTGAATGCTCTCCAGCAGGGTCTGTCTGGGGGCCTGGAGTTTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376488.8
3UTR-3UTR CCA 90 bp GGTCAGGGTTTCATTGTCCAAGCCGGCCTGACACCTGCCGCCCTGCCCTTGCCCCGTTCTTGGGGGTACTaGGAAGGGAAATTTCCCACT +
Preference number: 2 (lower is better)
Translates to: GQGFIVQAGLTPAALPLPRSWGY*EGKFPT
Trigger: AGTGGGAAATTTCCCTTCCCAGTACCCCCAAGAACG...GGGCAAGGGCAGGGCGGCAGGTGTCAGGCCGGCTTGGACAATGAAACCCTGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
3UTR-3UTR CCA 90 bp TCAGGGTTTCATTGTCCAAGCCGGCCTGACACCTGCCGCCCTGCCCTTGCCCAGAGGCTCAGACGTTCTTaGGGGTACTGGGAAGGGAAA +
Preference number: 2 (lower is better)
Translates to: SGFHCPSRPDTCRPALAQRLRRS*GYWEGK
Trigger: TTTCCCTTCCCAGTACCCCCAAGAACGTCTGAGCCT...CTGGGCAAGGGCAGGGCGGCAGGTGTCAGGCCGGCTTGGACAATGAAACCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
3UTR-3UTR CCA 90 bp TGCCAAGGCTGCTCCCACACTCCCTACACTCAAATCCCGGGTGGCAGCCATAATCCTTGCCCGAGTCCCTaGGGTTGGGAGATGGTGTCC +
Preference number: 2 (lower is better)
Translates to: CQGCSHTPYTQIPGGSHNPCPSP*GWEMVS
Trigger: GGACACCATCTCCCAACCCCAGGGACTCGGGCAAGG...ATTATGGCTGCCACCCGGGATTTGAGTGTAGGGAGTGTGGGAGCAGCCTTGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396743.7
ENST00000455452.5
3UTR-3UTR GCA 90 bp TGCCAAGGCTGCTCCCACACTCCCTACACTCAAATCCCGGGTGGCAGCCATAATCTGGGGCTGCCTGGCTaGCAGTTGGTCTGTCTCTGT +
Preference number: 2 (lower is better)
Translates to: CQGCSHTPYTQIPGGSHNLGLPG*QLVCLC
Trigger: ACAGAGACAGACCAACTGGCAGCCAGGCAGCCCCAG...ATTATGGCTGCCACCCGGGATTTGAGTGTAGGGAGTGTGGGAGCAGCCTTGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
3UTR-3UTR GCA 90 bp GCATTCACACCTCTGAGGTCAAGCCAAGGTCCGTGCCATTGCATCCTCTGCCCATATCTTCGGCACCCTTaGCCGAGTCCCTGGGGTTGG +
Preference number: 2 (lower is better)
Translates to: AFTPLRSSQGPCHCILCPYLRHP*PSPWGW
Trigger: CCAACCCCAGGGACTCGGGCAAGGGTGCCGAAGATA...TGGGCAGAGGATGCAATGGCACGGACCTTGGCTTGACCTCAGAGGTGTGAATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396743.7
3UTR-3UTR GCA 90 bp CTGCCAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCCTATCTTCGGCACCCTTaGCCGAGTCCCTGGGGTTGG +
Preference number: 2 (lower is better)
Translates to: LPVGLSLCASCLSSAPLPYLRHP*PSPWGW
Trigger: CCAACCCCAGGGACTCGGGCAAGGGTGCCGAAGATA...GGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396743.7
ENST00000455452.5
3UTR-3UTR CCA 90 bp CAGGGTTTCATTGTCCAAGCCGGCCTGACACCTGCCGCCCTGCCCTTGCCCAGTCGTTCTTGGGGGTACTaGGAAGGGAAATTTCCCACT +
Preference number: 2 (lower is better)
Translates to: QGFIVQAGLTPAALPLPSRSWGY*EGKFPT
Trigger: AGTGGGAAATTTCCCTTCCCAGTACCCCCAAGAACG...ACTGGGCAAGGGCAGGGCGGCAGGTGTCAGGCCGGCTTGGACAATGAAACCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
3UTR-3UTR CCA 90 bp ACCCTGCTGGAGAGCATTCACACCTCTGAGGTCAAGCCAAGGTCCGTGCCATTGCGGCCTCCATGCAGCTaGAGGCCAGAAGACAGCAAC +
Preference number: 2 (lower is better)
Translates to: TLLESIHTSEVKPRSVPLRPPCS*RPEDSN
Trigger: GTTGCTGTCTTCTGGCCTCCAGCTGCATGGAGGCCG...CAATGGCACGGACCTTGGCTTGACCTCAGAGGTGTGAATGCTCTCCAGCAGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
3UTR-3UTR GCA 90 bp GCATTCACACCTCTGAGGTCAAGCCAAGGTCCGTGCCATTGCATCCTCTGCCCAGAGTCCCCTGTGGAATaGAGGGATGGTTCTGTGCGG +
Preference number: 2 (lower is better)
Translates to: AFTPLRSSQGPCHCILCPESPVE*RDGSVR
Trigger: CCGCACAGAACCATCCCTGCATTCCACAGGGGACTC...TGGGCAGAGGATGCAATGGCACGGACCTTGGCTTGACCTCAGAGGTGTGAATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376488.8
3UTR-3UTR GCA 90 bp CTGCCAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCCGAGTCCCCTGTGGAATaGAGGGATGGTTCTGTGCGG +
Preference number: 2 (lower is better)
Translates to: LPVGLSLCASCLSSAPLPESPVE*RDGSVR
Trigger: CCGCACAGAACCATCCCTGCATTCCACAGGGGACTC...GGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000610466.4
3UTR-3UTR GCA 90 bp CAGCAAATCAAATACAAACTCCAGGCCCCCAGACAGACCCTGCTGGAGAGCATTCTGCCGCCCTGCCCTTaGCCAGTGCACACCCTAGAC +
Preference number: 2 (lower is better)
Translates to: QQIKYKLQAPRQTLLESILPPCP*PVHTLD
Trigger: GTCTAGGGTGTGCACTGGGCAAGGGCAGGGCGGCAG...AATGCTCTCCAGCAGGGTCTGTCTGGGGGCCTGGAGTTTGTATTTGATTTGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
3UTR-3UTR CCA 90 bp AGGGGCAGGGAGACTTTCCTCTGTCTGAATGTCTCTCTCCTCTGGGGCTGCCTGCAGGAGTACTGGGGTTaGGAGATGGTGTCCAATCCC +
Preference number: 2 (lower is better)
Translates to: RGRETFLCLNVSLLWGCLQEYWG*EMVSNP
Trigger: GGGATTGGACACCATCTCCCAACCCCAGTACTCCTG...CAGGCAGCCCCAGAGGAGAGAGACATTCAGACAGAGGAAAGTCTCCCTGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000610466.4
3UTR-3UTR CCA 90 bp TGCCAAGGCTGCTCCCACACTCCCTACACTCAAATCCCGGGTGGCAGCCATAATGGAGAGCAGGAGTACTaGGGTTGGGAGATGGTGTCC +
Preference number: 2 (lower is better)
Translates to: CQGCSHTPYTQIPGGSHNGEQEY*GWEMVS
Trigger: GGACACCATCTCCCAACCCCAGTACTCCTGCTCTCC...ATTATGGCTGCCACCCGGGATTTGAGTGTAGGGAGTGTGGGAGCAGCCTTGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156084.8
ENST00000376488.8
3UTR-3UTR CCA 90 bp CTGCCAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCCGGAGAGCAGGAGTACTaGGGTTGGGAGATGGTGTCC +
Preference number: 2 (lower is better)
Translates to: LPVGLSLCASCLSSAPLPGEQEY*GWEMVS
Trigger: GGACACCATCTCCCAACCCCAGTACTCCTGCTCTCC...GGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000610466.4
3UTR-3UTR CCA 90 bp TGGCTGCCAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGGGAGAGCAGGAGTACTaGGGTTGGGAGATGGTGTCC +
Preference number: 2 (lower is better)
Translates to: WLPVGLSLCASCLSSAPLGEQEY*GWEMVS
Trigger: GGACACCATCTCCCAACCCCAGTACTCCTGCTCTCC...CAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTGGCAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000610466.4
3UTR-3UTR GCA 90 bp TCAGGGTTTCATTGTCCAAGCCGGCCTGACACCTGCCGCCCTGCCCTTGCCCAGCCTTCACAGAGCCAGTaGTGTCGTCTATATCATTTT +
Preference number: 2 (lower is better)
Translates to: SGFHCPSRPDTCRPALAQPSQSQ*CRLYHF
Trigger: AAAATGATATAGACGACAGCACTGGCTCTGTGAAGG...CTGGGCAAGGGCAGGGCGGCAGGTGTCAGGCCGGCTTGGACAATGAAACCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
3UTR-3UTR CCA 90 bp AATACAAACTCCAGGCCCCCAGACAGACCCTGCTGGAGAGCATTCACACCTCTGTGTGGAATGCAGGGATaGTTCTGTGCGGGATGGGGT +
Preference number: 2 (lower is better)
Translates to: NTNSRPPDRPCWRAFTPLCGMQG*FCAGWG
Trigger: ACCCCATCCCGCACAGAACCATCCCTGCATTCCACA...CAGAGGTGTGAATGCTCTCCAGCAGGGTCTGTCTGGGGGCCTGGAGTTTGTATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376488.8
3UTR-3UTR CCA 90 bp CAGCAAATCAAATACAAACTCCAGGCCCCCAGACAGACCCTGCTGGAGAGCATTTCCTCTGGGGCTGCCTaGCTGCCAGTTGGTCTGTCT +
Preference number: 2 (lower is better)
Translates to: QQIKYKLQAPRQTLLESISSGAA*LPVGLS
Trigger: AGACAGACCAACTGGCAGCCAGGCAGCCCCAGAGGA...AATGCTCTCCAGCAGGGTCTGTCTGGGGGCCTGGAGTTTGTATTTGATTTGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
3UTR-3UTR GCA 90 bp CCATCTGCCAAGGCTGCTCCCACACTCCCTACACTCAAATCCCGGGTGGCAGCCCCTTCACAGAGCCAGTaGTGTCGTCTATATCATTTT +
Preference number: 2 (lower is better)
Translates to: PSAKAAPTLPTLKSRVAAPSQSQ*CRLYHF
Trigger: AAAATGATATAGACGACAGCACTGGCTCTGTGAAGG...GGCTGCCACCCGGGATTTGAGTGTAGGGAGTGTGGGAGCAGCCTTGGCAGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
3UTR-3UTR CCA 90 bp TGCCAAGGCTGCTCCCACACTCCCTACACTCAAATCCCGGGTGGCAGCCATAATCGTTCTTGGGGGTACTaGGAAGGGAAATTTCCCACT +
Preference number: 2 (lower is better)
Translates to: CQGCSHTPYTQIPGGSHNRSWGY*EGKFPT
Trigger: AGTGGGAAATTTCCCTTCCCAGTACCCCCAAGAACG...ATTATGGCTGCCACCCGGGATTTGAGTGTAGGGAGTGTGGGAGCAGCCTTGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
3UTR-3UTR CCA 90 bp TTTAATAAGCAGCAAATCAAATACAAACTCCAGGCCCCCAGACAGACCCTGCTGGCACACCCTAGACCCTaGGCCGGCCTCCATGCAGCT +
Preference number: 2 (lower is better)
Translates to: FNKQQIKYKLQAPRQTLLAHPRP*AGLHAA
Trigger: AGCTGCATGGAGGCCGGCCCAGGGTCTAGGGTGTGC...CAGCAGGGTCTGTCTGGGGGCCTGGAGTTTGTATTTGATTTGCTGCTTATTAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
3UTR-3UTR GCA 90 bp GGAGGTTTAATAAGCAGCAAATCAAATACAAACTCCAGGCCCCCAGACAGACCCCTGGGGCTGCCTGGCTaGCAGTTGGTCTGTCTCTGT +
Preference number: 2 (lower is better)
Translates to: GGLISSKSNTNSRPPDRPLGLPG*QLVCLC
Trigger: ACAGAGACAGACCAACTGGCAGCCAGGCAGCCCCAG...GGGTCTGTCTGGGGGCCTGGAGTTTGTATTTGATTTGCTGCTTATTAAACCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
3UTR-3UTR GCA 90 bp GGAGGTTTAATAAGCAGCAAATCAAATACAAACTCCAGGCCCCCAGACAGACCCAGCAACCCATATCTTTaGACCCTCCTCCATGCCCCA +
Preference number: 2 (lower is better)
Translates to: GGLISSKSNTNSRPPDRPSNPYL*TLLHAP
Trigger: TGGGGCATGGAGGAGGGTGCAAAGATATGGGTTGCT...GGGTCTGTCTGGGGGCCTGGAGTTTGTATTTGATTTGCTGCTTATTAAACCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
3UTR-3UTR GCA 90 bp ACAAACTCCAGGCCCCCAGACAGACCCTGCTGGAGAGCATTCACACCTCTGAGGCATTTGGTTTTATTGTaGCAAGGACATTACAGATGG +
Preference number: 2 (lower is better)
Translates to: TNSRPPDRPCWRAFTPLRHLVLL*QGHYRW
Trigger: CCATCTGTAATGTCCTTGGCACAATAAAACCAAATG...CCTCAGAGGTGTGAATGCTCTCCAGCAGGGTCTGTCTGGGGGCCTGGAGTTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
3UTR-3UTR GCA 90 bp ACAGAACAGAGTCGCTCAGGGAAACTGACATTTGGTTTTATTGTGCCAAGGACACCTTCACAGAGCCAGTaGTGTCGTCTATATCATTTT +
Preference number: 2 (lower is better)
Translates to: TEQSRSGKLTFGFIVPRTPSQSQ*CRLYHF
Trigger: AAAATGATATAGACGACAGCACTGGCTCTGTGAAGG...TGTCCTTGGCACAATAAAACCAAATGTCAGTTTCCCTGAGCGACTCTGTTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
3UTR-3UTR CAA 90 bp CCATCTGCCAAGGCTGCTCCCACACTCCCTACACTCAAATCCCGGGTGGCAGCCCTGCCTGGCTGCCAGTaGGTCTGTCTCTGTGTGCCT +
Preference number: 3 (lower is better)
Translates to: PSAKAAPTLPTLKSRVAALPGCQ*VCLCVP
Trigger: AGGCACACAGAGACAGACCAACTGGCAGCCAGGCAG...GGCTGCCACCCGGGATTTGAGTGTAGGGAGTGTGGGAGCAGCCTTGGCAGATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
3UTR GCA 72 bp AGAGCATTCACACCTCTGAGGTCAAGCCAAGGTCCGTaGCATTGCATCCTCTGCCCAGAGGCCCGCCCAACC +
Preference number: 3 (lower is better)
Translates to: RAFTPLRSSQGP*HCILCPEARPT
Trigger: GGTTGGGCGGGCCTCTGGGCAGAGGATGCAATGGCACGGACCTTGGCTTGACCTCAGAGGTGTGAATGCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
3UTR-3UTR CAA 90 bp TCAGGGTTTCATTGTCCAAGCCGGCCTGACACCTGCCGCCCTGCCCTTGCCCAGGTCTCTGTGTGCCTCTaGTCTATCTTCGGCACCCTT +
Preference number: 3 (lower is better)
Translates to: SGFHCPSRPDTCRPALAQVSVCL*SIFGTL
Trigger: AAGGGTGCCGAAGATAGACAAGAGGCACACAGAGAC...CTGGGCAAGGGCAGGGCGGCAGGTGTCAGGCCGGCTTGGACAATGAAACCCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
3UTR-3UTR CAA 90 bp CCATCTGCCAAGGCTGCTCCCACACTCCCTACACTCAAATCCCGGGTGGCAGCCAAGGCTCAGACGTTCTaGGGGGTACTGGGAAGGGAA +
Preference number: 3 (lower is better)
Translates to: PSAKAAPTLPTLKSRVAAKAQTF*GVLGRE
Trigger: TTCCCTTCCCAGTACCCCCAAGAACGTCTGAGCCTT...GGCTGCCACCCGGGATTTGAGTGTAGGGAGTGTGGGAGCAGCCTTGGCAGATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
3UTR-3UTR CAA 90 bp TGCCAAGGCTGCTCCCACACTCCCTACACTCAAATCCCGGGTGGCAGCCATAATCTATCTTCGGCACCCTaGCCCGAGTCCCTGGGGTTG +
Preference number: 3 (lower is better)
Translates to: CQGCSHTPYTQIPGGSHNLSSAP*PESLGL
Trigger: CAACCCCAGGGACTCGGGCAAGGGTGCCGAAGATAG...ATTATGGCTGCCACCCGGGATTTGAGTGTAGGGAGTGTGGGAGCAGCCTTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396743.7
ENST00000455452.5
3UTR-3UTR CAA 90 bp TGCCAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCCGCTATCTTCGGCACCCTaGCCCGAGTCCCTGGGGTTG +
Preference number: 3 (lower is better)
Translates to: CQLVCLCVPLVYLRHPCPLSSAP*PESLGL
Trigger: CAACCCCAGGGACTCGGGCAAGGGTGCCGAAGATAG...CGGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396743.7
ENST00000455452.5
3UTR-3UTR CAA 90 bp ACAAACTCCAGGCCCCCAGACAGACCCTGCTGGAGAGCATTCACACCTCTGAGGAAGGCTCAGACGTTCTaGGGGGTACTGGGAAGGGAA +
Preference number: 3 (lower is better)
Translates to: TNSRPPDRPCWRAFTPLRKAQTF*GVLGRE
Trigger: TTCCCTTCCCAGTACCCCCAAGAACGTCTGAGCCTT...CCTCAGAGGTGTGAATGCTCTCCAGCAGGGTCTGTCTGGGGGCCTGGAGTTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
3UTR-3UTR CAA 90 bp ACCCTGCTGGAGAGCATTCACACCTCTGAGGTCAAGCCAAGGTCCGTGCCATTGCAGCAACCCATATCTTaGCACCCTCCTCCATGCCCC +
Preference number: 3 (lower is better)
Translates to: TLLESIHTSEVKPRSVPLQQPIS*HPPPCP
Trigger: GGGGCATGGAGGAGGGTGCAAAGATATGGGTTGCTG...CAATGGCACGGACCTTGGCTTGACCTCAGAGGTGTGAATGCTCTCCAGCAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
3UTR TCA 72 bp CCCCAGACAGACCCTGCTGGAGAGCATTCACACCTCTaGGGTCAAGCCAAGGTCCGTGCCATTGCATCCTCT +
Preference number: 3 (lower is better)
Translates to: PQTDPAGEHSHL*GQAKVRAIASS
Trigger: AGAGGATGCAATGGCACGGACCTTGGCTTGACCTCAGAGGTGTGAATGCTCTCCAGCAGGGTCTGTCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
3UTR-3UTR CAA 90 bp ACAAACTCCAGGCCCCCAGACAGACCCTGCTGGAGAGCATTCACACCTCTGAGGGTCTCTGTGTGCCTCTaGTCTATCTTCGGCACCCTT +
Preference number: 3 (lower is better)
Translates to: TNSRPPDRPCWRAFTPLRVSVCL*SIFGTL
Trigger: AAGGGTGCCGAAGATAGACAAGAGGCACACAGAGAC...CCTCAGAGGTGTGAATGCTCTCCAGCAGGGTCTGTCTGGGGGCCTGGAGTTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
3UTR GCA 72 bp TGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTaGCCGAGTCCCTGGGGTTGGGAGATGGTGTCCAAT +
Preference number: 3 (lower is better)
Translates to: CLCVPLVYLRHP*PSPWGWEMVSN
Trigger: ATTGGACACCATCTCCCAACCCCAGGGACTCGGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396743.7
ENST00000455452.5
3UTR CCA 72 bp AATGTCTCTCTCCTCTGGGGCTGCCTGGCTGCCAGTTaGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGC +
Preference number: 3 (lower is better)
Translates to: NVSLLWGCLAAS*SVSVCLLSIFG
Trigger: GCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTGGCAGCCAGGCAGCCCCAGAGGAGAGAGACATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
3UTR-3UTR CAA 90 bp CAGCAAATCAAATACAAACTCCAGGCCCCCAGACAGACCCTGCTGGAGAGCATTCTATCTTCGGCACCCTaGCCCGAGTCCCCTGTGGAA +
Preference number: 3 (lower is better)
Translates to: QQIKYKLQAPRQTLLESILSSAP*PESPVE
Trigger: TTCCACAGGGGACTCGGGCAAGGGTGCCGAAGATAG...AATGCTCTCCAGCAGGGTCTGTCTGGGGGCCTGGAGTTTGTATTTGATTTGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376488.8
3UTR CCA 72 bp TCAAATACAAACTCCAGGCCCCCAGACAGACCCTGCTaGAGAGCATTCACACCTCTGAGGTCAAGCCAAGGT +
Preference number: 3 (lower is better)
Translates to: SNTNSRPPDRPC*RAFTPLRSSQG
Trigger: ACCTTGGCTTGACCTCAGAGGTGTGAATGCTCTCCAGCAGGGTCTGTCTGGGGGCCTGGAGTTTGTATTTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
3UTR-3UTR CAA 90 bp CAGCAAATCAAATACAAACTCCAGGCCCCCAGACAGACCCTGCTGGAGAGCATTGTCTCTGTGTGCCTCTaGTCTATCTTCGGCACCCTT +
Preference number: 3 (lower is better)
Translates to: QQIKYKLQAPRQTLLESIVSVCL*SIFGTL
Trigger: AAGGGTGCCGAAGATAGACAAGAGGCACACAGAGAC...AATGCTCTCCAGCAGGGTCTGTCTGGGGGCCTGGAGTTTGTATTTGATTTGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
3UTR-3UTR CAA 90 bp GGAGGTTTAATAAGCAGCAAATCAAATACAAACTCCAGGCCCCCAGACAGACCCCAGCAACCCATATCTTaGCACCCTCCTCCATGCCCC +
Preference number: 3 (lower is better)
Translates to: GGLISSKSNTNSRPPDRPQQPIS*HPPPCP
Trigger: GGGGCATGGAGGAGGGTGCAAAGATATGGGTTGCTG...GGGTCTGTCTGGGGGCCTGGAGTTTGTATTTGATTTGCTGCTTATTAAACCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
3UTR GCA 72 bp AAATCAAATACAAACTCCAGGCCCCCAGACAGACCCTaGTGGAGAGCATTCACACCTCTGAGGTCAAGCCAA +
Preference number: 3 (lower is better)
Translates to: KSNTNSRPPDRP*WRAFTPLRSSQ
Trigger: TTGGCTTGACCTCAGAGGTGTGAATGCTCTCCAGCAGGGTCTGTCTGGGGGCCTGGAGTTTGTATTTGATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR GCA 90 bp GCCCTGCCCTTGCCCAGTGCACACCCTAGACCCTGGGCCGGCCTCCATGCAGCTCTGCCGCCCTGCCCTTaGCCAGTGCACACCCTAGAC +
Preference number: 4 (lower is better)
Translates to: ALPLPSAHPRPWAGLHAALPPCP*PVHTLD
Trigger: GTCTAGGGTGTGCACTGGGCAAGGGCAGGGCGGCAG...AGCTGCATGGAGGCCGGCCCAGGGTCTAGGGTGTGCACTGGGCAAGGGCAGGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR TCA 90 bp TCAGGGTTTCATTGTCCAAGCCGGCCTGACACCTGCCGCCCTGCCCTTGCCCAGCCTGGTAGCGGGCCTTaGGGCGGTGGCGAAGCTCGC +
Preference number: 4 (lower is better)
Translates to: SGFHCPSRPDTCRPALAQPGSGP*GGGEAR
Trigger: GCGAGCTTCGCCACCGCCTCAAGGCCCGCTACCAGG...CTGGGCAAGGGCAGGGCGGCAGGTGTCAGGCCGGCTTGGACAATGAAACCCTGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
CDS-3UTR CCA 90 bp ACGGGTGCCCCATCTGCCAAGGCTGCTCCCACACTCCCTACACTCAAATCCCGGCGGGCCTTGAGGCGGTaGCGAAGCTCGCGGACGGGC +
Preference number: 4 (lower is better)
Translates to: TGAPSAKAAPTLPTLKSRRALRR*RSSRTG
Trigger: GCCCGTCCGCGAGCTTCGCCACCGCCTCAAGGCCCG...CCGGGATTTGAGTGTAGGGAGTGTGGGAGCAGCCTTGGCAGATGGGGCACCCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
CDS-3UTR CCA 90 bp TCAGGGTTTCATTGTCCAAGCCGGCCTGACACCTGCCGCCCTGCCCTTGCCCAGCTGGCTTTCCGGGGCTaGCTGGGGCCTCGGACCTGG +
Preference number: 4 (lower is better)
Translates to: SGFHCPSRPDTCRPALAQLAFRG*LGPRTW
Trigger: CCAGGTCCGAGGCCCCAGCCAGCCCCGGAAAGCCAG...CTGGGCAAGGGCAGGGCGGCAGGTGTCAGGCCGGCTTGGACAATGAAACCCTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR TCA 90 bp CCATCTGCCAAGGCTGCTCCCACACTCCCTACACTCAAATCCCGGGTGGCAGCCCCTGGTAGCGGGCCTTaGGGCGGTGGCGAAGCTCGC +
Preference number: 4 (lower is better)
Translates to: PSAKAAPTLPTLKSRVAAPGSGP*GGGEAR
Trigger: GCGAGCTTCGCCACCGCCTCAAGGCCCGCTACCAGG...GGCTGCCACCCGGGATTTGAGTGTAGGGAGTGTGGGAGCAGCCTTGGCAGATGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
CDS-3UTR TCA 90 bp CAGGGTTTCATTGTCCAAGCCGGCCTGACACCTGCCGCCCTGCCCTTGCCCAGTCCAACCCCGGGAGCTTaGCGTCGCCGCTTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: QGFIVQAGLTPAALPLPSPTPGA*RRRLLC
Trigger: GCACAGCAAGCGGCGACGTCAAGCTCCCGGGGTTGG...ACTGGGCAAGGGCAGGGCGGCAGGTGTCAGGCCGGCTTGGACAATGAAACCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR GCA 90 bp TCAGGGTTTCATTGTCCAAGCCGGCCTGACACCTGCCGCCCTGCCCTTGCCCAGCTTGACGTCGCCGCTTaGTGTGCCCAGGCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: SGFHCPSRPDTCRPALAQLDVAA*CAQARS
Trigger: GCTCCGGGCCTGGGCACAGCAAGCGGCGACGTCAAG...CTGGGCAAGGGCAGGGCGGCAGGTGTCAGGCCGGCTTGGACAATGAAACCCTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR GCA 90 bp GCCCTGCCCTTGCCCAGTGCACACCCTAGACCCTGGGCCGGCCTCCATGCAGCTGCCACTGGAGGCTGCTaGTGTGGCCGAACTGCATGT +
Preference number: 4 (lower is better)
Translates to: ALPLPSAHPRPWAGLHAAATGGC*CGRTAC
Trigger: ACATGCAGTTCGGCCACAGCAGCAGCCTCCAGTGGC...AGCTGCATGGAGGCCGGCCCAGGGTCTAGGGTGTGCACTGGGCAAGGGCAGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR TCA 90 bp AGAGGGAAGAAGCCAAAGAAGGTGAGGTGGCACCGGAGAGCAGGAGTACTGGGGGCCAGCGCCCAGCGATaGAGAGCGCCCGGCGGTCCT +
Preference number: 4 (lower is better)
Translates to: RGKKPKKVRWHRRAGVLGASAQR*RAPGGP
Trigger: AGGACCGCCGGGCGCTCTTCATCGCTGGGCGCTGGC...CCCCAGTACTCCTGCTCTCCGGTGCCACCTCACCTTCTTTGGCTTCTTCCCTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000610466.4
CDS-3UTR TCA 90 bp GCCCTGCCCTTGCCCAGTGCACACCCTAGACCCTGGGCCGGCCTCCATGCAGCTCTGCAAACCCTGGTTTaGATGATGGCAGGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: ALPLPSAHPRPWAGLHAALQTLV*MMAGPA
Trigger: GGCTGGGCCTGCCATCATTCAAACCAGGGTTTGCAG...AGCTGCATGGAGGCCGGCCCAGGGTCTAGGGTGTGCACTGGGCAAGGGCAGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR GCA 90 bp GCCCTGCCCTTGCCCAGTGCACACCCTAGACCCTGGGCCGGCCTCCATGCAGCTGAGTCCCCTGTGGAATaGAGGGATGGTTCTGTGCGG +
Preference number: 4 (lower is better)
Translates to: ALPLPSAHPRPWAGLHAAESPVE*RDGSVR
Trigger: CCGCACAGAACCATCCCTGCATTCCACAGGGGACTC...AGCTGCATGGAGGCCGGCCCAGGGTCTAGGGTGTGCACTGGGCAAGGGCAGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156084.8
ENST00000376488.8
CDS-3UTR GCA 90 bp CAGGGTTTCATTGTCCAAGCCGGCCTGACACCTGCCGCCCTGCCCTTGCCCAGTCTGCCGCCCTGCCCTTaGCCAGTGCACACCCTAGAC +
Preference number: 4 (lower is better)
Translates to: QGFIVQAGLTPAALPLPSLPPCP*PVHTLD
Trigger: GTCTAGGGTGTGCACTGGGCAAGGGCAGGGCGGCAG...ACTGGGCAAGGGCAGGGCGGCAGGTGTCAGGCCGGCTTGGACAATGAAACCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR GCA 90 bp TCTGAGGTCAAGCCAAGGTCCGTGCCATTGCATCCTCTGCCCAGAGGCCCGCCCCTGCCGCCCTGCCCTTaGCCAGTGCACACCCTAGAC +
Preference number: 4 (lower is better)
Translates to: SEVKPRSVPLHPLPRGPPLPPCP*PVHTLD
Trigger: GTCTAGGGTGTGCACTGGGCAAGGGCAGGGCGGCAG...GGGCGGGCCTCTGGGCAGAGGATGCAATGGCACGGACCTTGGCTTGACCTCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR GCA 90 bp GGTCAGGGTTTCATTGTCCAAGCCGGCCTGACACCTGCCGCCCTGCCCTTGCCCCACGGGTGCCCCATCTaGCAAGGCTGCTCCCACACT +
Preference number: 4 (lower is better)
Translates to: GQGFIVQAGLTPAALPLPHGCPI*QGCSHT
Trigger: AGTGTGGGAGCAGCCTTGGCAGATGGGGCACCCGTG...GGGCAAGGGCAGGGCGGCAGGTGTCAGGCCGGCTTGGACAATGAAACCCTGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR CCA 90 bp AACTCCAGGCCCCCAGACAGACCCTGCTGGAGAGCATTCACACCTCTGAGGTCACGGGCCTTGAGGCGGTaGCGAAGCTCGCGGACGGGC +
Preference number: 4 (lower is better)
Translates to: NSRPPDRPCWRAFTPLRSRALRR*RSSRTG
Trigger: GCCCGTCCGCGAGCTTCGCCACCGCCTCAAGGCCCG...TGACCTCAGAGGTGTGAATGCTCTCCAGCAGGGTCTGTCTGGGGGCCTGGAGTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR CCA 90 bp GATAGTGGCAGCGGCAATGAGAGAGAGTGCAGGGGTGGGCTAGCCAGAGGGAAGCTGGCTTTCCGGGGCTaGCTGGGGCCTCGGACCTGG +
Preference number: 4 (lower is better)
Translates to: DSGSGNERECRGGLARGKLAFRG*LGPRTW
Trigger: CCAGGTCCGAGGCCCCAGCCAGCCCCGGAAAGCCAG...CTTCCCTCTGGCTAGCCCACCCCTGCACTCTCTCTCATTGCCGCTGCCACTATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000428668.2
ENST00000610466.4
CDS-3UTR TCA 90 bp AGAGGGAAGAAGCCAAAGAAGGTGAGGTGGCACCGGAGAGCAGGAGTACTGGGGCCTGGTAGCGGGCCTTaGGGCGGTGGCGAAGCTCGC +
Preference number: 4 (lower is better)
Translates to: RGKKPKKVRWHRRAGVLGPGSGP*GGGEAR
Trigger: GCGAGCTTCGCCACCGCCTCAAGGCCCGCTACCAGG...CCCCAGTACTCCTGCTCTCCGGTGCCACCTCACCTTCTTTGGCTTCTTCCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000610466.4
CDS-3UTR GCA 90 bp GATAGTGGCAGCGGCAATGAGAGAGAGTGCAGGGGTGGGCTAGCCAGAGGGAAGGAGGCTGAACTCCGCTaGCGCGGGGACCGGCTAGTC +
Preference number: 4 (lower is better)
Translates to: DSGSGNERECRGGLARGKEAELR*RGDRLV
Trigger: GACTAGCCGGTCCCCGCGGCAGCGGAGTTCAGCCTC...CTTCCCTCTGGCTAGCCCACCCCTGCACTCTCTCTCATTGCCGCTGCCACTATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000428668.2
ENST00000610466.4
CDS-3UTR GCA 90 bp GCCCTGCCCTTGCCCAGTGCACACCCTAGACCCTGGGCCGGCCTCCATGCAGCTGGGAAGGGGGCTTCATaGCCAATTCAGCATGCAGCT +
Preference number: 4 (lower is better)
Translates to: ALPLPSAHPRPWAGLHAAGKGAS*PIQHAA
Trigger: AGCTGCATGCTGAATTGGGCATGAAGCCCCCTTCCC...AGCTGCATGGAGGCCGGCCCAGGGTCTAGGGTGTGCACTGGGCAAGGGCAGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR CCA 90 bp TGCCAAGGCTGCTCCCACACTCCCTACACTCAAATCCCGGGTGGCAGCCATAATCGGGCCTTGAGGCGGTaGCGAAGCTCGCGGACGGGC +
Preference number: 4 (lower is better)
Translates to: CQGCSHTPYTQIPGGSHNRALRR*RSSRTG
Trigger: GCCCGTCCGCGAGCTTCGCCACCGCCTCAAGGCCCG...ATTATGGCTGCCACCCGGGATTTGAGTGTAGGGAGTGTGGGAGCAGCCTTGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
CDS-3UTR CCA 90 bp CTGCCAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCCCGGGCCTTGAGGCGGTaGCGAAGCTCGCGGACGGGC +
Preference number: 4 (lower is better)
Translates to: LPVGLSLCASCLSSAPLPRALRR*RSSRTG
Trigger: GCCCGTCCGCGAGCTTCGCCACCGCCTCAAGGCCCG...GGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000610466.4
CDS-3UTR CCA 90 bp TCTGAGGTCAAGCCAAGGTCCGTGCCATTGCATCCTCTGCCCAGAGGCCCGCCCAACTGCATGTGGCGCTaGCTTTCCGGGGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: SEVKPRSVPLHPLPRGPPNCMWR*LSGAGW
Trigger: CCAGCCAGCCCCGGAAAGCCAGCGCCACATGCAGTT...GGGCGGGCCTCTGGGCAGAGGATGCAATGGCACGGACCTTGGCTTGACCTCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR CCA 90 bp TCAGGGTTTCATTGTCCAAGCCGGCCTGACACCTGCCGCCCTGCCCTTGCCCAGAACTGCATGTGGCGCTaGCTTTCCGGGGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: SGFHCPSRPDTCRPALAQNCMWR*LSGAGW
Trigger: CCAGCCAGCCCCGGAAAGCCAGCGCCACATGCAGTT...CTGGGCAAGGGCAGGGCGGCAGGTGTCAGGCCGGCTTGGACAATGAAACCCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR CCA 90 bp GGTCAGGGTTTCATTGTCCAAGCCGGCCTGACACCTGCCGCCCTGCCCTTGCCCCGGCCTCCATGCAGCTaGAGGCCAGAAGACAGCAAC +
Preference number: 4 (lower is better)
Translates to: GQGFIVQAGLTPAALPLPRPPCS*RPEDSN
Trigger: GTTGCTGTCTTCTGGCCTCCAGCTGCATGGAGGCCG...GGGCAAGGGCAGGGCGGCAGGTGTCAGGCCGGCTTGGACAATGAAACCCTGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR TCA 90 bp TGTCTATCTTCGGCACCCTTGCCCGAGTCCCTGGGGTTGGGAGATGGTGTCCAACCAACCCCGGGAGCTTaGCGTCGCCGCTTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: CLSSAPLPESLGLGDGVQPTPGA*RRRLLC
Trigger: GCACAGCAAGCGGCGACGTCAAGCTCCCGGGGTTGG...TTGGACACCATCTCCCAACCCCAGGGACTCGGGCAAGGGTGCCGAAGATAGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396743.7
ENST00000455452.5
CDS-3UTR TCA 90 bp CAGGGTTTCATTGTCCAAGCCGGCCTGACACCTGCCGCCCTGCCCTTGCCCAGTCGAGCCTGTTTCTCCTaGTCCCGCAACCACTGCAGG +
Preference number: 4 (lower is better)
Translates to: QGFIVQAGLTPAALPLPSRACFS*SRNHCR
Trigger: CCTGCAGTGGTTGCGGGATCAGGAGAAACAGGCTCG...ACTGGGCAAGGGCAGGGCGGCAGGTGTCAGGCCGGCTTGGACAATGAAACCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR GCA 90 bp AGAGGGAAGAAGCCAAAGAAGGTGAGGTGGCACCGGAGAGCAGGAGTACTGGGGCTTGACGTCGCCGCTTaGTGTGCCCAGGCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: RGKKPKKVRWHRRAGVLGLDVAA*CAQARS
Trigger: GCTCCGGGCCTGGGCACAGCAAGCGGCGACGTCAAG...CCCCAGTACTCCTGCTCTCCGGTGCCACCTCACCTTCTTTGGCTTCTTCCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000610466.4
CDS-3UTR GCA 90 bp AGGGGCAGGGAGACTTTCCTCTGTCTGAATGTCTCTCTCCTCTGGGGCTGCCTGCTTGACGTCGCCGCTTaGTGTGCCCAGGCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: RGRETFLCLNVSLLWGCLLDVAA*CAQARS
Trigger: GCTCCGGGCCTGGGCACAGCAAGCGGCGACGTCAAG...CAGGCAGCCCCAGAGGAGAGAGACATTCAGACAGAGGAAAGTCTCCCTGCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR GCA 90 bp CTGCCAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCCCCTCACGCTCGGGACTaGCCCCGCCAACCGCGCCAA +
Preference number: 4 (lower is better)
Translates to: LPVGLSLCASCLSSAPLPPHARD*PRQPRQ
Trigger: TTGGCGCGGTTGGCGGGGGCAGTCCCGAGCGTGAGG...GGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTGGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR GCA 90 bp AGGGGCAGGGAGACTTTCCTCTGTCTGAATGTCTCTCTCCTCTGGGGCTGCCTGGAGGCTGAACTCCGCTaGCGCGGGGACCGGCTAGTC +
Preference number: 4 (lower is better)
Translates to: RGRETFLCLNVSLLWGCLEAELR*RGDRLV
Trigger: GACTAGCCGGTCCCCGCGGCAGCGGAGTTCAGCCTC...CAGGCAGCCCCAGAGGAGAGAGACATTCAGACAGAGGAAAGTCTCCCTGCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR GCA 90 bp AGAGGGAAGAAGCCAAAGAAGGTGAGGTGGCACCGGAGAGCAGGAGTACTGGGGGAGGCTGAACTCCGCTaGCGCGGGGACCGGCTAGTC +
Preference number: 4 (lower is better)
Translates to: RGKKPKKVRWHRRAGVLGEAELR*RGDRLV
Trigger: GACTAGCCGGTCCCCGCGGCAGCGGAGTTCAGCCTC...CCCCAGTACTCCTGCTCTCCGGTGCCACCTCACCTTCTTTGGCTTCTTCCCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000428668.2
ENST00000610466.4
CDS-3UTR GCA 90 bp GGTCAGGGTTTCATTGTCCAAGCCGGCCTGACACCTGCCGCCCTGCCCTTGCCCGAGTCCCCTGTGGAATaGAGGGATGGTTCTGTGCGG +
Preference number: 4 (lower is better)
Translates to: GQGFIVQAGLTPAALPLPESPVE*RDGSVR
Trigger: CCGCACAGAACCATCCCTGCATTCCACAGGGGACTC...GGGCAAGGGCAGGGCGGCAGGTGTCAGGCCGGCTTGGACAATGAAACCCTGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156084.8
ENST00000376488.8
CDS-3UTR GCA 90 bp GATAGTGGCAGCGGCAATGAGAGAGAGTGCAGGGGTGGGCTAGCCAGAGGGAAGCTGGGCCGGCCTCCATaGAGCTGGAGGCCAGAAGAC +
Preference number: 4 (lower is better)
Translates to: DSGSGNERECRGGLARGKLGRPP*SWRPED
Trigger: GTCTTCTGGCCTCCAGCTGCATGGAGGCCGGCCCAG...CTTCCCTCTGGCTAGCCCACCCCTGCACTCTCTCTCATTGCCGCTGCCACTATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156084.8
ENST00000376488.8
CDS-3UTR GCA 90 bp TGCCTCTTGTCTATCTTCGGCACCCTTGCCCGAGTCCCTGGGGTTGGGAGATGGCTGGGCCGGCCTCCATaGAGCTGGAGGCCAGAAGAC +
Preference number: 4 (lower is better)
Translates to: CLLSIFGTLARVPGVGRWLGRPP*SWRPED
Trigger: GTCTTCTGGCCTCCAGCTGCATGGAGGCCGGCCCAG...CCATCTCCCAACCCCAGGGACTCGGGCAAGGGTGCCGAAGATAGACAAGAGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396743.7
ENST00000455452.5
CDS-3UTR GCA 90 bp CCATCTGCCAAGGCTGCTCCCACACTCCCTACACTCAAATCCCGGGTGGCAGCCCACGGGTGCCCCATCTaGCAAGGCTGCTCCCACACT +
Preference number: 4 (lower is better)
Translates to: PSAKAAPTLPTLKSRVAAHGCPI*QGCSHT
Trigger: AGTGTGGGAGCAGCCTTGGCAGATGGGGCACCCGTG...GGCTGCCACCCGGGATTTGAGTGTAGGGAGTGTGGGAGCAGCCTTGGCAGATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR CCA 90 bp GCCCTGCCCTTGCCCAGTGCACACCCTAGACCCTGGGCCGGCCTCCATGCAGCTTGGCCTCCCAGTCTGTaGCCCGTTTCTTGTCTTCTA +
Preference number: 4 (lower is better)
Translates to: ALPLPSAHPRPWAGLHAAWPPSL*PVSCLL
Trigger: TAGAAGACAAGAAACGGGCCACAGACTGGGAGGCCA...AGCTGCATGGAGGCCGGCCCAGGGTCTAGGGTGTGCACTGGGCAAGGGCAGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR CCA 90 bp TGCCAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCCGCTGGCTTTCCGGGGCTaGCTGGGGCCTCGGACCTGG +
Preference number: 4 (lower is better)
Translates to: CQLVCLCVPLVYLRHPCPLAFRG*LGPRTW
Trigger: CCAGGTCCGAGGCCCCAGCCAGCCCCGGAAAGCCAG...CGGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR CCA 90 bp CCATCTGCCAAGGCTGCTCCCACACTCCCTACACTCAAATCCCGGGTGGCAGCCTGGAGGCTGCTGCTGTaGCCGAACTGCATGTGGCGC +
Preference number: 4 (lower is better)
Translates to: PSAKAAPTLPTLKSRVAAWRLLL*PNCMWR
Trigger: GCGCCACATGCAGTTCGGCCACAGCAGCAGCCTCCA...GGCTGCCACCCGGGATTTGAGTGTAGGGAGTGTGGGAGCAGCCTTGGCAGATGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR CCA 90 bp GGTCAGGGTTTCATTGTCCAAGCCGGCCTGACACCTGCCGCCCTGCCCTTGCCCAATGTCTCTCTCCTCTaGGGCTGCCTGGCTGCCAGT +
Preference number: 4 (lower is better)
Translates to: GQGFIVQAGLTPAALPLPNVSLL*GCLAAS
Trigger: ACTGGCAGCCAGGCAGCCCCAGAGGAGAGAGACATT...GGGCAAGGGCAGGGCGGCAGGTGTCAGGCCGGCTTGGACAATGAAACCCTGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR CCA 90 bp TCTGAGGTCAAGCCAAGGTCCGTGCCATTGCATCCTCTGCCCAGAGGCCCGCCCCCGAGTCCCTGGGGTTaGGAGATGGTGTCCAATCCC +
Preference number: 4 (lower is better)
Translates to: SEVKPRSVPLHPLPRGPPPSPWG*EMVSNP
Trigger: GGGATTGGACACCATCTCCCAACCCCAGGGACTCGG...GGGCGGGCCTCTGGGCAGAGGATGCAATGGCACGGACCTTGGCTTGACCTCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396743.7
CDS-3UTR TCA 90 bp TGCCAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCCGCCAACCCCGGGAGCTTaGCGTCGCCGCTTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: CQLVCLCVPLVYLRHPCPPTPGA*RRRLLC
Trigger: GCACAGCAAGCGGCGACGTCAAGCTCCCGGGGTTGG...CGGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR TCA 90 bp GCCCTGCCCTTGCCCAGTGCACACCCTAGACCCTGGGCCGGCCTCCATGCAGCTAGACTTTCCTCTGTCTaGATGTCTCTCTCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: ALPLPSAHPRPWAGLHAARLSSV*MSLSSG
Trigger: CCCAGAGGAGAGAGACATTCAGACAGAGGAAAGTCT...AGCTGCATGGAGGCCGGCCCAGGGTCTAGGGTGTGCACTGGGCAAGGGCAGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR GCA 90 bp CTGCCAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCCCTTGACGTCGCCGCTTaGTGTGCCCAGGCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: LPVGLSLCASCLSSAPLPLDVAA*CAQARS
Trigger: GCTCCGGGCCTGGGCACAGCAAGCGGCGACGTCAAG...GGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR GCA 90 bp CAGGGTTTCATTGTCCAAGCCGGCCTGACACCTGCCGCCCTGCCCTTGCCCAGTCATAGCCTCGATGCGTaGTGCAGCCGCCTCATACTC +
Preference number: 4 (lower is better)
Translates to: QGFIVQAGLTPAALPLPSHSLDA*CSRLIL
Trigger: GAGTATGAGGCGGCTGCAGCACGCATCGAGGCTATG...ACTGGGCAAGGGCAGGGCGGCAGGTGTCAGGCCGGCTTGGACAATGAAACCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR GCA 90 bp GGTCAGGGTTTCATTGTCCAAGCCGGCCTGACACCTGCCGCCCTGCCCTTGCCCTCAAACCAATGCTCCTaGTGCTCGACAGTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: GQGFIVQAGLTPAALPLPSNQCS*CSTVAG
Trigger: CCCTGCCACTGTCGAGCAGCAGGAGCATTGGTTTGA...GGGCAAGGGCAGGGCGGCAGGTGTCAGGCCGGCTTGGACAATGAAACCCTGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR GCA 90 bp GCATTCACACCTCTGAGGTCAAGCCAAGGTCCGTGCCATTGCATCCTCTGCCCAGAGGCTGAACTCCGCTaGCGCGGGGACCGGCTAGTC +
Preference number: 4 (lower is better)
Translates to: AFTPLRSSQGPCHCILCPEAELR*RGDRLV
Trigger: GACTAGCCGGTCCCCGCGGCAGCGGAGTTCAGCCTC...TGGGCAGAGGATGCAATGGCACGGACCTTGGCTTGACCTCAGAGGTGTGAATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR GCA 90 bp TGCCAAGGCTGCTCCCACACTCCCTACACTCAAATCCCGGGTGGCAGCCATAATGAGGCTGAACTCCGCTaGCGCGGGGACCGGCTAGTC +
Preference number: 4 (lower is better)
Translates to: CQGCSHTPYTQIPGGSHNEAELR*RGDRLV
Trigger: GACTAGCCGGTCCCCGCGGCAGCGGAGTTCAGCCTC...ATTATGGCTGCCACCCGGGATTTGAGTGTAGGGAGTGTGGGAGCAGCCTTGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR GCA 90 bp TCAGGGTTTCATTGTCCAAGCCGGCCTGACACCTGCCGCCCTGCCCTTGCCCAGCTGCCGAGAACTGACTaGTTGTACCTGGCGCACAGG +
Preference number: 4 (lower is better)
Translates to: SGFHCPSRPDTCRPALAQLPRTD*LYLAHR
Trigger: CCTGTGCGCCAGGTACAAGCAGTCAGTTCTCGGCAG...CTGGGCAAGGGCAGGGCGGCAGGTGTCAGGCCGGCTTGGACAATGAAACCCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR GCA 90 bp CAGGGTTTCATTGTCCAAGCCGGCCTGACACCTGCCGCCCTGCCCTTGCCCAGTCTGCCGAGAACTGACTaGTTGTACCTGGCGCACAGG +
Preference number: 4 (lower is better)
Translates to: QGFIVQAGLTPAALPLPSLPRTD*LYLAHR
Trigger: CCTGTGCGCCAGGTACAAGCAGTCAGTTCTCGGCAG...ACTGGGCAAGGGCAGGGCGGCAGGTGTCAGGCCGGCTTGGACAATGAAACCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR GCA 90 bp GAAGAAGCCAAAGAAGGTGAGGTGGCACCGGAGAGCAGGAGTACTGGGGTTGGGCTGGGCCGGCCTCCATaGAGCTGGAGGCCAGAAGAC +
Preference number: 4 (lower is better)
Translates to: EEAKEGEVAPESRSTGVGLGRPP*SWRPED
Trigger: GTCTTCTGGCCTCCAGCTGCATGGAGGCCGGCCCAG...CCCAACCCCAGTACTCCTGCTCTCCGGTGCCACCTCACCTTCTTTGGCTTCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156084.8
ENST00000376488.8
CDS-3UTR GCA 90 bp GTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCCGAGTCCCTGGCTGCCGCCCTGCCCTTaGCCAGTGCACACCCTAGAC +
Preference number: 4 (lower is better)
Translates to: VCLCVPLVYLRHPCPSPWLPPCP*PVHTLD
Trigger: GTCTAGGGTGTGCACTGGGCAAGGGCAGGGCGGCAG...CCAGGGACTCGGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396743.7
ENST00000455452.5
CDS-3UTR GCA 90 bp GATAGTGGCAGCGGCAATGAGAGAGAGTGCAGGGGTGGGCTAGCCAGAGGGAAGTGCCATTGCATCCTCTaGCCAGAGGCCCGCCCAACC +
Preference number: 4 (lower is better)
Translates to: DSGSGNERECRGGLARGKCHCIL*PEARPT
Trigger: GGTTGGGCGGGCCTCTGGGCAGAGGATGCAATGGCA...CTTCCCTCTGGCTAGCCCACCCCTGCACTCTCTCTCATTGCCGCTGCCACTATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376488.8
CDS-3UTR GCA 90 bp CAGGGTTTCATTGTCCAAGCCGGCCTGACACCTGCCGCCCTGCCCTTGCCCAGTCCCCCAGACAGACCCTaGTGGAGAGCATTCACACCT +
Preference number: 4 (lower is better)
Translates to: QGFIVQAGLTPAALPLPSPPDRP*WRAFTP
Trigger: AGGTGTGAATGCTCTCCAGCAGGGTCTGTCTGGGGG...ACTGGGCAAGGGCAGGGCGGCAGGTGTCAGGCCGGCTTGGACAATGAAACCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR GCA 90 bp AGAGGGAAGAAGCCAAAGAAGGTGAGGTGGCACCGGAGAGCAGGAGTACTGGGGTGCAGGCGTCGGTACTaGGGACGGACAGCGTGGCCT +
Preference number: 4 (lower is better)
Translates to: RGKKPKKVRWHRRAGVLGCRRRY*GRTAWP
Trigger: AGGCCACGCTGTCCGTCCGCAGTACCGACGCCTGCA...CCCCAGTACTCCTGCTCTCCGGTGCCACCTCACCTTCTTTGGCTTCTTCCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428668.2
CDS-3UTR CCA 90 bp GCCCTGCCCTTGCCCAGTGCACACCCTAGACCCTGGGCCGGCCTCCATGCAGCTACCTCATGCATGTCCTaGTCTCCATACACCTGGTCA +
Preference number: 4 (lower is better)
Translates to: ALPLPSAHPRPWAGLHAATSCMS*SPYTWS
Trigger: TGACCAGGTGTATGGAGACCAGGACATGCATGAGGT...AGCTGCATGGAGGCCGGCCCAGGGTCTAGGGTGTGCACTGGGCAAGGGCAGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR CCA 90 bp GGTCAGGGTTTCATTGTCCAAGCCGGCCTGACACCTGCCGCCCTGCCCTTGCCCGTACCTGTGCTGTACTaGTACACCTCCACAGGACGG +
Preference number: 4 (lower is better)
Translates to: GQGFIVQAGLTPAALPLPVPVLY*YTSTGR
Trigger: CCGTCCTGTGGAGGTGTACCAGTACAGCACAGGTAC...GGGCAAGGGCAGGGCGGCAGGTGTCAGGCCGGCTTGGACAATGAAACCCTGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156084.8
ENST00000455452.5
CDS-3UTR CCA 90 bp TCTGAGGTCAAGCCAAGGTCCGTGCCATTGCATCCTCTGCCCAGAGGCCCGCCCCGATGGCTTCATTTGTaGCCTCCCAGTCTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: SEVKPRSVPLHPLPRGPPRWLHL*PPSLWP
Trigger: GGGCCACAGACTGGGAGGCCACAAATGAAGCCATCG...GGGCGGGCCTCTGGGCAGAGGATGCAATGGCACGGACCTTGGCTTGACCTCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR CCA 90 bp TCAGGGTTTCATTGTCCAAGCCGGCCTGACACCTGCCGCCCTGCCCTTGCCCAGCCACCTGCTCCTCGATaGCTTCATTTGTGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: SGFHCPSRPDTCRPALAQPPAPR*LHLWPP
Trigger: GGGAGGCCACAAATGAAGCCATCGAGGAGCAGGTGG...CTGGGCAAGGGCAGGGCGGCAGGTGTCAGGCCGGCTTGGACAATGAAACCCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR CCA 90 bp TGGCTGCCAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCTGGCTTTCCGGGGCTaGCTGGGGCCTCGGACCTGG +
Preference number: 4 (lower is better)
Translates to: WLPVGLSLCASCLSSAPLLAFRG*LGPRTW
Trigger: CCAGGTCCGAGGCCCCAGCCAGCCCCGGAAAGCCAG...CAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTGGCAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR CCA 90 bp GATAGTGGCAGCGGCAATGAGAGAGAGTGCAGGGGTGGGCTAGCCAGAGGGAAGTGGCCGAACTGCATGTaGCGCTGGCTTTCCGGGGCT +
Preference number: 4 (lower is better)
Translates to: DSGSGNERECRGGLARGKWPNCM*RWLSGA
Trigger: AGCCCCGGAAAGCCAGCGCCACATGCAGTTCGGCCA...CTTCCCTCTGGCTAGCCCACCCCTGCACTCTCTCTCATTGCCGCTGCCACTATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000428668.2
ENST00000610466.4
CDS-3UTR CCA 90 bp GGTCAGGGTTTCATTGTCCAAGCCGGCCTGACACCTGCCGCCCTGCCCTTGCCCCAGGAGTACTGGGGTTaGGAGATGGTGTCCAATCCC +
Preference number: 4 (lower is better)
Translates to: GQGFIVQAGLTPAALPLPQEYWG*EMVSNP
Trigger: GGGATTGGACACCATCTCCCAACCCCAGTACTCCTG...GGGCAAGGGCAGGGCGGCAGGTGTCAGGCCGGCTTGGACAATGAAACCCTGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000156084.8
ENST00000376488.8
CDS-3UTR CCA 90 bp AGAGGGAAGAAGCCAAAGAAGGTGAGGTGGCACCGGAGAGCAGGAGTACTGGGGGCACACCCTAGACCCTaGGCCGGCCTCCATGCAGCT +
Preference number: 4 (lower is better)
Translates to: RGKKPKKVRWHRRAGVLGAHPRP*AGLHAA
Trigger: AGCTGCATGGAGGCCGGCCCAGGGTCTAGGGTGTGC...CCCCAGTACTCCTGCTCTCCGGTGCCACCTCACCTTCTTTGGCTTCTTCCCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000156084.8
ENST00000376488.8
CDS-3UTR CCA 90 bp AACTCCAGGCCCCCAGACAGACCCTGCTGGAGAGCATTCACACCTCTGAGGTCAGCACACCCTAGACCCTaGGCCGGCCTCCATGCAGCT +
Preference number: 4 (lower is better)
Translates to: NSRPPDRPCWRAFTPLRSAHPRP*AGLHAA
Trigger: AGCTGCATGGAGGCCGGCCCAGGGTCTAGGGTGTGC...TGACCTCAGAGGTGTGAATGCTCTCCAGCAGGGTCTGTCTGGGGGCCTGGAGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR TCA 90 bp TGGCTGCCAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCAACCCCGGGAGCTTaGCGTCGCCGCTTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: WLPVGLSLCASCLSSAPLPTPGA*RRRLLC
Trigger: GCACAGCAAGCGGCGACGTCAAGCTCCCGGGGTTGG...CAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTGGCAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR TCA 90 bp GCCTCTTGTCTATCTTCGGCACCCTTGCCCGAGTCCCTGGGGTTGGGAGATGGTCGAGCCTGTTTCTCCTaGTCCCGCAACCACTGCAGG +
Preference number: 4 (lower is better)
Translates to: ASCLSSAPLPESLGLGDGRACFS*SRNHCR
Trigger: CCTGCAGTGGTTGCGGGATCAGGAGAAACAGGCTCG...ACCATCTCCCAACCCCAGGGACTCGGGCAAGGGTGCCGAAGATAGACAAGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396743.7
ENST00000455452.5
CDS-3UTR GCA 90 bp TGCCTCTTGTCTATCTTCGGCACCCTTGCCCGAGTCCCTGGGGTTGGGAGATGGCTCACTGTTGTAGCCTaGGCCGACCTCCTCACGCTC +
Preference number: 4 (lower is better)
Translates to: CLLSIFGTLARVPGVGRWLTVVA*ADLLTL
Trigger: GAGCGTGAGGAGGTCGGCGCAGGCTACAACAGTGAG...CCATCTCCCAACCCCAGGGACTCGGGCAAGGGTGCCGAAGATAGACAAGAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396743.7
ENST00000455452.5
CDS-3UTR GCA 90 bp ACGGGTGCCCCATCTGCCAAGGCTGCTCCCACACTCCCTACACTCAAATCCCGGCATAGCCTCGATGCGTaGTGCAGCCGCCTCATACTC +
Preference number: 4 (lower is better)
Translates to: TGAPSAKAAPTLPTLKSRHSLDA*CSRLIL
Trigger: GAGTATGAGGCGGCTGCAGCACGCATCGAGGCTATG...CCGGGATTTGAGTGTAGGGAGTGTGGGAGCAGCCTTGGCAGATGGGGCACCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR GCA 90 bp TCAGGGTTTCATTGTCCAAGCCGGCCTGACACCTGCCGCCCTGCCCTTGCCCAGTCAAACCAATGCTCCTaGTGCTCGACAGTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: SGFHCPSRPDTCRPALAQSNQCS*CSTVAG
Trigger: CCCTGCCACTGTCGAGCAGCAGGAGCATTGGTTTGA...CTGGGCAAGGGCAGGGCGGCAGGTGTCAGGCCGGCTTGGACAATGAAACCCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR GCA 90 bp GCCCTGCCCTTGCCCAGTGCACACCCTAGACCCTGGGCCGGCCTCCATGCAGCTACGGTTGTACATCTCTaGCATGGCCTGCATCTCAAT +
Preference number: 4 (lower is better)
Translates to: ALPLPSAHPRPWAGLHAATVVHL*HGLHLN
Trigger: ATTGAGATGCAGGCCATGGCAGAGATGTACAACCGT...AGCTGCATGGAGGCCGGCCCAGGGTCTAGGGTGTGCACTGGGCAAGGGCAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR GCA 90 bp GATAGTGGCAGCGGCAATGAGAGAGAGTGCAGGGGTGGGCTAGCCAGAGGGAAGCTGCTGTGGCCGAACTaGATGTGGCGCTGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: DSGSGNERECRGGLARGKLLWPN*MWRWLS
Trigger: GGAAAGCCAGCGCCACATGCAGTTCGGCCACAGCAG...CTTCCCTCTGGCTAGCCCACCCCTGCACTCTCTCTCATTGCCGCTGCCACTATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000428668.2
ENST00000610466.4
CDS-3UTR GCA 90 bp TCAGGGTTTCATTGTCCAAGCCGGCCTGACACCTGCCGCCCTGCCCTTGCCCAGGGGAAGGGGGCTTCATaGCCAATTCAGCATGCAGCT +
Preference number: 4 (lower is better)
Translates to: SGFHCPSRPDTCRPALAQGKGAS*PIQHAA
Trigger: AGCTGCATGCTGAATTGGGCATGAAGCCCCCTTCCC...CTGGGCAAGGGCAGGGCGGCAGGTGTCAGGCCGGCTTGGACAATGAAACCCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR GCA 90 bp TCTGAGGTCAAGCCAAGGTCCGTGCCATTGCATCCTCTGCCCAGAGGCCCGCCCGGGAAGGGGGCTTCATaGCCAATTCAGCATGCAGCT +
Preference number: 4 (lower is better)
Translates to: SEVKPRSVPLHPLPRGPPGKGAS*PIQHAA
Trigger: AGCTGCATGCTGAATTGGGCATGAAGCCCCCTTCCC...GGGCGGGCCTCTGGGCAGAGGATGCAATGGCACGGACCTTGGCTTGACCTCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR GCA 90 bp AGAGGGAAGAAGCCAAAGAAGGTGAGGTGGCACCGGAGAGCAGGAGTACTGGGGTGCCCGGTCGGCCCCTaGCGAGAACTGACTGCTTGT +
Preference number: 4 (lower is better)
Translates to: RGKKPKKVRWHRRAGVLGCPVGP*RELTAC
Trigger: ACAAGCAGTCAGTTCTCGGCAGGGGCCGACCGGGCA...CCCCAGTACTCCTGCTCTCCGGTGCCACCTCACCTTCTTTGGCTTCTTCCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000428668.2
ENST00000610466.4
CDS-3UTR GCA 90 bp AGGGGCAGGGAGACTTTCCTCTGTCTGAATGTCTCTCTCCTCTGGGGCTGCCTGTGCCCGGTCGGCCCCTaGCGAGAACTGACTGCTTGT +
Preference number: 4 (lower is better)
Translates to: RGRETFLCLNVSLLWGCLCPVGP*RELTAC
Trigger: ACAAGCAGTCAGTTCTCGGCAGGGGCCGACCGGGCA...CAGGCAGCCCCAGAGGAGAGAGACATTCAGACAGAGGAAAGTCTCCCTGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR GCA 90 bp GCCCTGCCCTTGCCCAGTGCACACCCTAGACCCTGGGCCGGCCTCCATGCAGCTGGGGGCGGGTCTCTGTaGACTTTGTTTTTCTTCATA +
Preference number: 4 (lower is better)
Translates to: ALPLPSAHPRPWAGLHAAGGGSL*TLFFFI
Trigger: TATGAAGAAAAACAAAGTGCACAGAGACCCGCCCCC...AGCTGCATGGAGGCCGGCCCAGGGTCTAGGGTGTGCACTGGGCAAGGGCAGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR GCA 90 bp GATAGTGGCAGCGGCAATGAGAGAGAGTGCAGGGGTGGGCTAGCCAGAGGGAAGCTGGGGCTGCCTGGCTaGCAGTTGGTCTGTCTCTGT +
Preference number: 4 (lower is better)
Translates to: DSGSGNERECRGGLARGKLGLPG*QLVCLC
Trigger: ACAGAGACAGACCAACTGGCAGCCAGGCAGCCCCAG...CTTCCCTCTGGCTAGCCCACCCCTGCACTCTCTCTCATTGCCGCTGCCACTATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000610466.4
CDS-3UTR GCA 90 bp TCAGGGTTTCATTGTCCAAGCCGGCCTGACACCTGCCGCCCTGCCCTTGCCCAGGCCTGCCCAGAAAGATaGCACCTTCACAGAGCCAGT +
Preference number: 4 (lower is better)
Translates to: SGFHCPSRPDTCRPALAQACPER*HLHRAS
Trigger: ACTGGCTCTGTGAAGGTGGCATCTTTCTGGGCAGGC...CTGGGCAAGGGCAGGGCGGCAGGTGTCAGGCCGGCTTGGACAATGAAACCCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR GCA 90 bp GCATTCACACCTCTGAGGTCAAGCCAAGGTCCGTGCCATTGCATCCTCTGCCCACTGGGCCGGCCTCCATaGAGCTGGAGGCCAGAAGAC +
Preference number: 4 (lower is better)
Translates to: AFTPLRSSQGPCHCILCPLGRPP*SWRPED
Trigger: GTCTTCTGGCCTCCAGCTGCATGGAGGCCGGCCCAG...TGGGCAGAGGATGCAATGGCACGGACCTTGGCTTGACCTCAGAGGTGTGAATGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR GCA 90 bp ACGGGTGCCCCATCTGCCAAGGCTGCTCCCACACTCCCTACACTCAAATCCCGGCCCCCAGACAGACCCTaGTGGAGAGCATTCACACCT +
Preference number: 4 (lower is better)
Translates to: TGAPSAKAAPTLPTLKSRPPDRP*WRAFTP
Trigger: AGGTGTGAATGCTCTCCAGCAGGGTCTGTCTGGGGG...CCGGGATTTGAGTGTAGGGAGTGTGGGAGCAGCCTTGGCAGATGGGGCACCCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR CCA 90 bp TGCCAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCCGTGGAGAAGCCTGTTGTaGCCGGGGACCCGCCACTGC +
Preference number: 4 (lower is better)
Translates to: CQLVCLCVPLVYLRHPCPWRSLL*PGTRHC
Trigger: GCAGTGGCGGGTCCCCGGCCACAACAGGCTTCTCCA...CGGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000610466.4
CDS-3UTR CCA 90 bp CAGGGTTTCATTGTCCAAGCCGGCCTGACACCTGCCGCCCTGCCCTTGCCCAGTTGGTCTCCATACACCTaGTCAGCTACAGCCCGGAAG +
Preference number: 4 (lower is better)
Translates to: QGFIVQAGLTPAALPLPSWSPYT*SATARK
Trigger: CTTCCGGGCTGTAGCTGACCAGGTGTATGGAGACCA...ACTGGGCAAGGGCAGGGCGGCAGGTGTCAGGCCGGCTTGGACAATGAAACCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR CCA 90 bp GGTCAGGGTTTCATTGTCCAAGCCGGCCTGACACCTGCCGCCCTGCCCTTGCCCTGGCCTCCCAGTCTGTaGCCCGTTTCTTGTCTTCTA +
Preference number: 4 (lower is better)
Translates to: GQGFIVQAGLTPAALPLPWPPSL*PVSCLL
Trigger: TAGAAGACAAGAAACGGGCCACAGACTGGGAGGCCA...GGGCAAGGGCAGGGCGGCAGGTGTCAGGCCGGCTTGGACAATGAAACCCTGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR CCA 90 bp ATCAAATACAAACTCCAGGCCCCCAGACAGACCCTGCTGGAGAGCATTCACACCCTGGCTTTCCGGGGCTaGCTGGGGCCTCGGACCTGG +
Preference number: 4 (lower is better)
Translates to: IKYKLQAPRQTLLESIHTLAFRG*LGPRTW
Trigger: CCAGGTCCGAGGCCCCAGCCAGCCCCGGAAAGCCAG...GGTGTGAATGCTCTCCAGCAGGGTCTGTCTGGGGGCCTGGAGTTTGTATTTGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR CCA 90 bp AGAGGGAAGAAGCCAAAGAAGGTGAGGTGGCACCGGAGAGCAGGAGTACTGGGGAACTGCATGTGGCGCTaGCTTTCCGGGGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: RGKKPKKVRWHRRAGVLGNCMWR*LSGAGW
Trigger: CCAGCCAGCCCCGGAAAGCCAGCGCCACATGCAGTT...CCCCAGTACTCCTGCTCTCCGGTGCCACCTCACCTTCTTTGGCTTCTTCCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000428668.2
ENST00000610466.4
CDS-3UTR CCA 90 bp AGGGGCAGGGAGACTTTCCTCTGTCTGAATGTCTCTCTCCTCTGGGGCTGCCTGAACTGCATGTGGCGCTaGCTTTCCGGGGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: RGRETFLCLNVSLLWGCLNCMWR*LSGAGW
Trigger: CCAGCCAGCCCCGGAAAGCCAGCGCCACATGCAGTT...CAGGCAGCCCCAGAGGAGAGAGACATTCAGACAGAGGAAAGTCTCCCTGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR CCA 90 bp AGGGGCAGGGAGACTTTCCTCTGTCTGAATGTCTCTCTCCTCTGGGGCTGCCTGTGGCCGAACTGCATGTaGCGCTGGCTTTCCGGGGCT +
Preference number: 4 (lower is better)
Translates to: RGRETFLCLNVSLLWGCLWPNCM*RWLSGA
Trigger: AGCCCCGGAAAGCCAGCGCCACATGCAGTTCGGCCA...CAGGCAGCCCCAGAGGAGAGAGACATTCAGACAGAGGAAAGTCTCCCTGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR CCA 90 bp AGAGGGAAGAAGCCAAAGAAGGTGAGGTGGCACCGGAGAGCAGGAGTACTGGGGTGGAGGCTGCTGCTGTaGCCGAACTGCATGTGGCGC +
Preference number: 4 (lower is better)
Translates to: RGKKPKKVRWHRRAGVLGWRLLL*PNCMWR
Trigger: GCGCCACATGCAGTTCGGCCACAGCAGCAGCCTCCA...CCCCAGTACTCCTGCTCTCCGGTGCCACCTCACCTTCTTTGGCTTCTTCCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000428668.2
ENST00000610466.4
CDS-3UTR CCA 90 bp ACAAACTCCAGGCCCCCAGACAGACCCTGCTGGAGAGCATTCACACCTCTGAGGTGGAGGCTGCTGCTGTaGCCGAACTGCATGTGGCGC +
Preference number: 4 (lower is better)
Translates to: TNSRPPDRPCWRAFTPLRWRLLL*PNCMWR
Trigger: GCGCCACATGCAGTTCGGCCACAGCAGCAGCCTCCA...CCTCAGAGGTGTGAATGCTCTCCAGCAGGGTCTGTCTGGGGGCCTGGAGTTTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR CCA 90 bp GATAGTGGCAGCGGCAATGAGAGAGAGTGCAGGGGTGGGCTAGCCAGAGGGAAGGAGAGAGTGCAGGGGTaGGCTAGCCAGAGGGAAGTG +
Preference number: 4 (lower is better)
Translates to: DSGSGNERECRGGLARGKERVQG*ASQREV
Trigger: CACTTCCCTCTGGCTAGCCCACCCCTGCACTCTCTC...CTTCCCTCTGGCTAGCCCACCCCTGCACTCTCTCTCATTGCCGCTGCCACTATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000428668.2
ENST00000610466.4
CDS-3UTR CCA 90 bp TGCCAAGGCTGCTCCCACACTCCCTACACTCAAATCCCGGGTGGCAGCCATAATCTGTGCGGGATGGGGTaGGGGGCAACAGGGCACATC +
Preference number: 4 (lower is better)
Translates to: CQGCSHTPYTQIPGGSHNLCGMG*GATGHI
Trigger: GATGTGCCCTGTTGCCCCCCACCCCATCCCGCACAG...ATTATGGCTGCCACCCGGGATTTGAGTGTAGGGAGTGTGGGAGCAGCCTTGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000156084.8
ENST00000376488.8
CDS-3UTR CCA 90 bp TGCCAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCCGCTGTGCGGGATGGGGTaGGGGGCAACAGGGCACATC +
Preference number: 4 (lower is better)
Translates to: CQLVCLCVPLVYLRHPCPLCGMG*GATGHI
Trigger: GATGTGCCCTGTTGCCCCCCACCCCATCCCGCACAG...CGGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000610466.4
CDS-3UTR CCA 90 bp CTGCCAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCCCTGTGCGGGATGGGGTaGGGGGCAACAGGGCACATC +
Preference number: 4 (lower is better)
Translates to: LPVGLSLCASCLSSAPLPLCGMG*GATGHI
Trigger: GATGTGCCCTGTTGCCCCCCACCCCATCCCGCACAG...GGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000610466.4
CDS-3UTR CCA 90 bp GCCTCTTGTCTATCTTCGGCACCCTTGCCCGAGTCCCTGGGGTTGGGAGATGGTTCCTCTGGGGCTGCCTaGCTGCCAGTTGGTCTGTCT +
Preference number: 4 (lower is better)
Translates to: ASCLSSAPLPESLGLGDGSSGAA*LPVGLS
Trigger: AGACAGACCAACTGGCAGCCAGGCAGCCCCAGAGGA...ACCATCTCCCAACCCCAGGGACTCGGGCAAGGGTGCCGAAGATAGACAAGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396743.7
ENST00000455452.5
CDS-3UTR CCA 90 bp TGCCAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCCGGCACACCCTAGACCCTaGGCCGGCCTCCATGCAGCT +
Preference number: 4 (lower is better)
Translates to: CQLVCLCVPLVYLRHPCPAHPRP*AGLHAA
Trigger: AGCTGCATGGAGGCCGGCCCAGGGTCTAGGGTGTGC...CGGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR CCA 90 bp TGCCTCTTGTCTATCTTCGGCACCCTTGCCCGAGTCCCTGGGGTTGGGAGATGGCCGAGTCCCTGGGGTTaGGAGATGGTGTCCAATCCC +
Preference number: 4 (lower is better)
Translates to: CLLSIFGTLARVPGVGRWPSPWG*EMVSNP
Trigger: GGGATTGGACACCATCTCCCAACCCCAGGGACTCGG...CCATCTCCCAACCCCAGGGACTCGGGCAAGGGTGCCGAAGATAGACAAGAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396743.7
ENST00000455452.5
CDS-3UTR CCA 90 bp AGAGGGAAGAAGCCAAAGAAGGTGAGGTGGCACCGGAGAGCAGGAGTACTGGGGTGCGGACGGACAGCGTaGCCTGTCCCACGTACGACA +
Preference number: 4 (lower is better)
Translates to: RGKKPKKVRWHRRAGVLGCGRTA*PVPRTT
Trigger: TGTCGTACGTGGGACAGGCCACGCTGTCCGTCCGCA...CCCCAGTACTCCTGCTCTCCGGTGCCACCTCACCTTCTTTGGCTTCTTCCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428668.2
3UTR CAA 72 bp TGCCTGGCTGCCAGTTGGTCTGTCTCTGTGTGCCTCTaGTCTATCTTCGGCACCCTTGCCCGAGTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: CLAASWSVSVCL*SIFGTLARVPG
Trigger: CCCAGGGACTCGGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTGGCAGCCAGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396743.7
ENST00000455452.5
CDS-3UTR TCA 90 bp GATAGTGGCAGCGGCAATGAGAGAGAGTGCAGGGGTGGGCTAGCCAGAGGGAAGCTGCAAACCCTGGTTTaGATGATGGCAGGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: DSGSGNERECRGGLARGKLQTLV*MMAGPA
Trigger: GGCTGGGCCTGCCATCATTCAAACCAGGGTTTGCAG...CTTCCCTCTGGCTAGCCCACCCCTGCACTCTCTCTCATTGCCGCTGCCACTATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000428668.2
ENST00000610466.4
CDS-3UTR TCA 90 bp AACTCCAGGCCCCCAGACAGACCCTGCTGGAGAGCATTCACACCTCTGAGGTCACGAGCCTGTTTCTCCTaGTCCCGCAACCACTGCAGG +
Preference number: 4 (lower is better)
Translates to: NSRPPDRPCWRAFTPLRSRACFS*SRNHCR
Trigger: CCTGCAGTGGTTGCGGGATCAGGAGAAACAGGCTCG...TGACCTCAGAGGTGTGAATGCTCTCCAGCAGGGTCTGTCTGGGGGCCTGGAGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR TCA 90 bp GAAGAAGCCAAAGAAGGTGAGGTGGCACCGGAGAGCAGGAGTACTGGGGTTGGGCGAGCCTGTTTCTCCTaGTCCCGCAACCACTGCAGG +
Preference number: 4 (lower is better)
Translates to: EEAKEGEVAPESRSTGVGRACFS*SRNHCR
Trigger: CCTGCAGTGGTTGCGGGATCAGGAGAAACAGGCTCG...CCCAACCCCAGTACTCCTGCTCTCCGGTGCCACCTCACCTTCTTTGGCTTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000428668.2
ENST00000610466.4
CDS-3UTR GCA 90 bp GTCTATCTTCGGCACCCTTGCCCGAGTCCCTGGGGTTGGGAGATGGTGTCCAATAGCCTCGATGCGTGCTaGAGCCGCCTCATACTCGTC +
Preference number: 4 (lower is better)
Translates to: VYLRHPCPSPWGWEMVSNSLDAC*SRLILV
Trigger: GACGAGTATGAGGCGGCTGCAGCACGCATCGAGGCT...ATTGGACACCATCTCCCAACCCCAGGGACTCGGGCAAGGGTGCCGAAGATAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396743.7
ENST00000455452.5
CDS-3UTR GCA 90 bp GGTCAGGGTTTCATTGTCCAAGCCGGCCTGACACCTGCCGCCCTGCCCTTGCCCGCCTTTTCAAACCAATaGTCCTGCTGCTCGACAGTG +
Preference number: 4 (lower is better)
Translates to: GQGFIVQAGLTPAALPLPAFSNQ*SCCSTV
Trigger: CACTGTCGAGCAGCAGGAGCATTGGTTTGAAAAGGC...GGGCAAGGGCAGGGCGGCAGGTGTCAGGCCGGCTTGGACAATGAAACCCTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR GCA 90 bp AGGGGCAGGGAGACTTTCCTCTGTCTGAATGTCTCTCTCCTCTGGGGCTGCCTGCTGCTGTGGCCGAACTaGATGTGGCGCTGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: RGRETFLCLNVSLLWGCLLLWPN*MWRWLS
Trigger: GGAAAGCCAGCGCCACATGCAGTTCGGCCACAGCAG...CAGGCAGCCCCAGAGGAGAGAGACATTCAGACAGAGGAAAGTCTCCCTGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR GCA 90 bp GAAGAAGCCAAAGAAGGTGAGGTGGCACCGGAGAGCAGGAGTACTGGGGTTGGGCTGCTGTGGCCGAACTaGATGTGGCGCTGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: EEAKEGEVAPESRSTGVGLLWPN*MWRWLS
Trigger: GGAAAGCCAGCGCCACATGCAGTTCGGCCACAGCAG...CCCAACCCCAGTACTCCTGCTCTCCGGTGCCACCTCACCTTCTTTGGCTTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000428668.2
ENST00000610466.4
CDS-3UTR GCA 90 bp GTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCCGAGTCCCTGGCTGCTGTGGCCGAACTaGATGTGGCGCTGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: VCLCVPLVYLRHPCPSPWLLWPN*MWRWLS
Trigger: GGAAAGCCAGCGCCACATGCAGTTCGGCCACAGCAG...CCAGGGACTCGGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396743.7
ENST00000455452.5
CDS-3UTR GCA 90 bp AGAGGGAAGAAGCCAAAGAAGGTGAGGTGGCACCGGAGAGCAGGAGTACTGGGGGCCACTGGAGGCTGCTaGTGTGGCCGAACTGCATGT +
Preference number: 4 (lower is better)
Translates to: RGKKPKKVRWHRRAGVLGATGGC*CGRTAC
Trigger: ACATGCAGTTCGGCCACAGCAGCAGCCTCCAGTGGC...CCCCAGTACTCCTGCTCTCCGGTGCCACCTCACCTTCTTTGGCTTCTTCCCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000428668.2
ENST00000610466.4
CDS-3UTR GCA 90 bp GATAGTGGCAGCGGCAATGAGAGAGAGTGCAGGGGTGGGCTAGCCAGAGGGAAGGCATGCAGCTCAGGGTaGTCAGGTGACGAGGCTGAA +
Preference number: 4 (lower is better)
Translates to: DSGSGNERECRGGLARGKACSSG*SGDEAE
Trigger: TTCAGCCTCGTCACCTGAGCACCCTGAGCTGCATGC...CTTCCCTCTGGCTAGCCCACCCCTGCACTCTCTCTCATTGCCGCTGCCACTATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000428668.2
ENST00000610466.4
CDS-3UTR GCA 90 bp TGCCTCTTGTCTATCTTCGGCACCCTTGCCCGAGTCCCTGGGGTTGGGAGATGGCTGCCGAGAACTGACTaGTTGTACCTGGCGCACAGG +
Preference number: 4 (lower is better)
Translates to: CLLSIFGTLARVPGVGRWLPRTD*LYLAHR
Trigger: CCTGTGCGCCAGGTACAAGCAGTCAGTTCTCGGCAG...CCATCTCCCAACCCCAGGGACTCGGGCAAGGGTGCCGAAGATAGACAAGAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396743.7
ENST00000455452.5
CDS-3UTR GCA 90 bp TGCCAAGGCTGCTCCCACACTCCCTACACTCAAATCCCGGGTGGCAGCCATAATTGCCCGGTCGGCCCCTaGCGAGAACTGACTGCTTGT +
Preference number: 4 (lower is better)
Translates to: CQGCSHTPYTQIPGGSHNCPVGP*RELTAC
Trigger: ACAAGCAGTCAGTTCTCGGCAGGGGCCGACCGGGCA...ATTATGGCTGCCACCCGGGATTTGAGTGTAGGGAGTGTGGGAGCAGCCTTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR GCA 90 bp AGGGGCAGGGAGACTTTCCTCTGTCTGAATGTCTCTCTCCTCTGGGGCTGCCTGCTGGGGCTGCCTGGCTaGCAGTTGGTCTGTCTCTGT +
Preference number: 4 (lower is better)
Translates to: RGRETFLCLNVSLLWGCLLGLPG*QLVCLC
Trigger: ACAGAGACAGACCAACTGGCAGCCAGGCAGCCCCAG...CAGGCAGCCCCAGAGGAGAGAGACATTCAGACAGAGGAAAGTCTCCCTGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR GCA 90 bp CCATCTGCCAAGGCTGCTCCCACACTCCCTACACTCAAATCCCGGGTGGCAGCCGCCTGCCCAGAAAGATaGCACCTTCACAGAGCCAGT +
Preference number: 4 (lower is better)
Translates to: PSAKAAPTLPTLKSRVAAACPER*HLHRAS
Trigger: ACTGGCTCTGTGAAGGTGGCATCTTTCTGGGCAGGC...GGCTGCCACCCGGGATTTGAGTGTAGGGAGTGTGGGAGCAGCCTTGGCAGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR GCA 90 bp AGGGGCAGGGAGACTTTCCTCTGTCTGAATGTCTCTCTCCTCTGGGGCTGCCTGCCATGCCCCATGGCCTaGCTGCCCAGAAAGATGCCA +
Preference number: 4 (lower is better)
Translates to: RGRETFLCLNVSLLWGCLPCPMA*LPRKMP
Trigger: TGGCATCTTTCTGGGCAGGCAGGCCATGGGGCATGG...CAGGCAGCCCCAGAGGAGAGAGACATTCAGACAGAGGAAAGTCTCCCTGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR GCA 90 bp AACTCCAGGCCCCCAGACAGACCCTGCTGGAGAGCATTCACACCTCTGAGGTCACCATGCCCCATGGCCTaGCTGCCCAGAAAGATGCCA +
Preference number: 4 (lower is better)
Translates to: NSRPPDRPCWRAFTPLRSPCPMA*LPRKMP
Trigger: TGGCATCTTTCTGGGCAGGCAGGCCATGGGGCATGG...TGACCTCAGAGGTGTGAATGCTCTCCAGCAGGGTCTGTCTGGGGGCCTGGAGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR GCA 90 bp TGTCTATCTTCGGCACCCTTGCCCGAGTCCCTGGGGTTGGGAGATGGTGTCCAACCATGCCCCATGGCCTaGCTGCCCAGAAAGATGCCA +
Preference number: 4 (lower is better)
Translates to: CLSSAPLPESLGLGDGVQPCPMA*LPRKMP
Trigger: TGGCATCTTTCTGGGCAGGCAGGCCATGGGGCATGG...TTGGACACCATCTCCCAACCCCAGGGACTCGGGCAAGGGTGCCGAAGATAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396743.7
ENST00000455452.5
CDS-3UTR GCA 90 bp TCTGAGGTCAAGCCAAGGTCCGTGCCATTGCATCCTCTGCCCAGAGGCCCGCCCAGCAACCCATATCTTTaGACCCTCCTCCATGCCCCA +
Preference number: 4 (lower is better)
Translates to: SEVKPRSVPLHPLPRGPPSNPYL*TLLHAP
Trigger: TGGGGCATGGAGGAGGGTGCAAAGATATGGGTTGCT...GGGCGGGCCTCTGGGCAGAGGATGCAATGGCACGGACCTTGGCTTGACCTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR GCA 90 bp CTGCCAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCCTGCCATTGCATCCTCTaGCCAGAGGCCCGCCCAACC +
Preference number: 4 (lower is better)
Translates to: LPVGLSLCASCLSSAPLPCHCIL*PEARPT
Trigger: GGTTGGGCGGGCCTCTGGGCAGAGGATGCAATGGCA...GGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR GCA 90 bp GTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCCGAGTCCCTGGTATCTTCGGCACCCTTaGCCGAGTCCCTGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: VCLCVPLVYLRHPCPSPWYLRHP*PSPWGW
Trigger: CCAACCCCAGGGACTCGGGCAAGGGTGCCGAAGATA...CCAGGGACTCGGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396743.7
ENST00000455452.5
CDS-3UTR CCA 90 bp ACGGGTGCCCCATCTGCCAAGGCTGCTCCCACACTCCCTACACTCAAATCCCGGTGGTCTCCATACACCTaGTCAGCTACAGCCCGGAAG +
Preference number: 4 (lower is better)
Translates to: TGAPSAKAAPTLPTLKSRWSPYT*SATARK
Trigger: CTTCCGGGCTGTAGCTGACCAGGTGTATGGAGACCA...CCGGGATTTGAGTGTAGGGAGTGTGGGAGCAGCCTTGGCAGATGGGGCACCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR CCA 90 bp TCAGGGTTTCATTGTCCAAGCCGGCCTGACACCTGCCGCCCTGCCCTTGCCCAGTGGCCTCCCAGTCTGTaGCCCGTTTCTTGTCTTCTA +
Preference number: 4 (lower is better)
Translates to: SGFHCPSRPDTCRPALAQWPPSL*PVSCLL
Trigger: TAGAAGACAAGAAACGGGCCACAGACTGGGAGGCCA...CTGGGCAAGGGCAGGGCGGCAGGTGTCAGGCCGGCTTGGACAATGAAACCCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR CCA 90 bp GCCTCTTGTCTATCTTCGGCACCCTTGCCCGAGTCCCTGGGGTTGGGAGATGGTCGATGGCTTCATTTGTaGCCTCCCAGTCTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: ASCLSSAPLPESLGLGDGRWLHL*PPSLWP
Trigger: GGGCCACAGACTGGGAGGCCACAAATGAAGCCATCG...ACCATCTCCCAACCCCAGGGACTCGGGCAAGGGTGCCGAAGATAGACAAGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396743.7
ENST00000455452.5
CDS-3UTR CCA 90 bp ACACCTCTGAGGTCAAGCCAAGGTCCGTGCCATTGCATCCTCTGCCCAGAGGCCCCACCTGCTCCTCGATaGCTTCATTTGTGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: TPLRSSQGPCHCILCPEAPPAPR*LHLWPP
Trigger: GGGAGGCCACAAATGAAGCCATCGAGGAGCAGGTGG...GGCCTCTGGGCAGAGGATGCAATGGCACGGACCTTGGCTTGACCTCAGAGGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR CCA 90 bp GATAGTGGCAGCGGCAATGAGAGAGAGTGCAGGGGTGGGCTAGCCAGAGGGAAGCCACCTGCTCCTCGATaGCTTCATTTGTGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: DSGSGNERECRGGLARGKPPAPR*LHLWPP
Trigger: GGGAGGCCACAAATGAAGCCATCGAGGAGCAGGTGG...CTTCCCTCTGGCTAGCCCACCCCTGCACTCTCTCTCATTGCCGCTGCCACTATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000428668.2
ENST00000610466.4
CDS-3UTR CCA 90 bp TGCCAAGGCTGCTCCCACACTCCCTACACTCAAATCCCGGGTGGCAGCCATAATAACTGCATGTGGCGCTaGCTTTCCGGGGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: CQGCSHTPYTQIPGGSHNNCMWR*LSGAGW
Trigger: CCAGCCAGCCCCGGAAAGCCAGCGCCACATGCAGTT...ATTATGGCTGCCACCCGGGATTTGAGTGTAGGGAGTGTGGGAGCAGCCTTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR CCA 90 bp TGCCAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCCGTGGCCGAACTGCATGTaGCGCTGGCTTTCCGGGGCT +
Preference number: 4 (lower is better)
Translates to: CQLVCLCVPLVYLRHPCPWPNCM*RWLSGA
Trigger: AGCCCCGGAAAGCCAGCGCCACATGCAGTTCGGCCA...CGGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR CCA 90 bp GCATTCACACCTCTGAGGTCAAGCCAAGGTCCGTGCCATTGCATCCTCTGCCCATGGAGGCTGCTGCTGTaGCCGAACTGCATGTGGCGC +
Preference number: 4 (lower is better)
Translates to: AFTPLRSSQGPCHCILCPWRLLL*PNCMWR
Trigger: GCGCCACATGCAGTTCGGCCACAGCAGCAGCCTCCA...TGGGCAGAGGATGCAATGGCACGGACCTTGGCTTGACCTCAGAGGTGTGAATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR CCA 90 bp ATGAGGGGCAGGGAGACTTTCCTCTGTCTGAATGTCTCTCTCCTCTGGGGCTGCTGGAGGCTGCTGCTGTaGCCGAACTGCATGTGGCGC +
Preference number: 4 (lower is better)
Translates to: MRGRETFLCLNVSLLWGCWRLLL*PNCMWR
Trigger: GCGCCACATGCAGTTCGGCCACAGCAGCAGCCTCCA...GCAGCCCCAGAGGAGAGAGACATTCAGACAGAGGAAAGTCTCCCTGCCCCTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR CCA 90 bp AGGGGCAGGGAGACTTTCCTCTGTCTGAATGTCTCTCTCCTCTGGGGCTGCCTGCTGACTGCTTGTACCTaGCGCACAGGGCGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: RGRETFLCLNVSLLWGCLLTACT*RTGRRR
Trigger: CCTCCTTCGCCCTGTGCGCCAGGTACAAGCAGTCAG...CAGGCAGCCCCAGAGGAGAGAGACATTCAGACAGAGGAAAGTCTCCCTGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR CCA 90 bp AGAGGGAAGAAGCCAAAGAAGGTGAGGTGGCACCGGAGAGCAGGAGTACTGGGGCTGACTGCTTGTACCTaGCGCACAGGGCGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: RGKKPKKVRWHRRAGVLGLTACT*RTGRRR
Trigger: CCTCCTTCGCCCTGTGCGCCAGGTACAAGCAGTCAG...CCCCAGTACTCCTGCTCTCCGGTGCCACCTCACCTTCTTTGGCTTCTTCCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000428668.2
ENST00000610466.4
CDS-3UTR CCA 90 bp GTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCCGAGTCCCTGGCTGACTGCTTGTACCTaGCGCACAGGGCGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: VCLCVPLVYLRHPCPSPWLTACT*RTGRRR
Trigger: CCTCCTTCGCCCTGTGCGCCAGGTACAAGCAGTCAG...CCAGGGACTCGGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396743.7
ENST00000455452.5
CDS-3UTR CCA 90 bp GATAGTGGCAGCGGCAATGAGAGAGAGTGCAGGGGTGGGCTAGCCAGAGGGAAGCCATCAACTCTTGTCTaGGGGCGGGTCTCTGTGCAC +
Preference number: 4 (lower is better)
Translates to: DSGSGNERECRGGLARGKPSTLV*GRVSVH
Trigger: GTGCACAGAGACCCGCCCCCAGACAAGAGTTGATGG...CTTCCCTCTGGCTAGCCCACCCCTGCACTCTCTCTCATTGCCGCTGCCACTATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000428668.2
ENST00000610466.4
CDS-3UTR CCA 90 bp GAAGAAGCCAAAGAAGGTGAGGTGGCACCGGAGAGCAGGAGTACTGGGGTTGGGGAGAGAGTGCAGGGGTaGGCTAGCCAGAGGGAAGTG +
Preference number: 4 (lower is better)
Translates to: EEAKEGEVAPESRSTGVGERVQG*ASQREV
Trigger: CACTTCCCTCTGGCTAGCCCACCCCTGCACTCTCTC...CCCAACCCCAGTACTCCTGCTCTCCGGTGCCACCTCACCTTCTTTGGCTTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000428668.2
ENST00000610466.4
CDS-3UTR CCA 90 bp AGAGGGAAGAAGCCAAAGAAGGTGAGGTGGCACCGGAGAGCAGGAGTACTGGGGGAGAGAGTGCAGGGGTaGGCTAGCCAGAGGGAAGTG +
Preference number: 4 (lower is better)
Translates to: RGKKPKKVRWHRRAGVLGERVQG*ASQREV
Trigger: CACTTCCCTCTGGCTAGCCCACCCCTGCACTCTCTC...CCCCAGTACTCCTGCTCTCCGGTGCCACCTCACCTTCTTTGGCTTCTTCCCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000428668.2
ENST00000610466.4
CDS-3UTR CCA 90 bp ACGGGTGCCCCATCTGCCAAGGCTGCTCCCACACTCCCTACACTCAAATCCCGGTGTGGAATGCAGGGATaGTTCTGTGCGGGATGGGGT +
Preference number: 4 (lower is better)
Translates to: TGAPSAKAAPTLPTLKSRCGMQG*FCAGWG
Trigger: ACCCCATCCCGCACAGAACCATCCCTGCATTCCACA...CCGGGATTTGAGTGTAGGGAGTGTGGGAGCAGCCTTGGCAGATGGGGCACCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000156084.8
ENST00000376488.8
CDS-3UTR CCA 90 bp TGTCTATCTTCGGCACCCTTGCCCGAGTCCCTGGGGTTGGGAGATGGTGTCCAATCCTCTGGGGCTGCCTaGCTGCCAGTTGGTCTGTCT +
Preference number: 4 (lower is better)
Translates to: CLSSAPLPESLGLGDGVQSSGAA*LPVGLS
Trigger: AGACAGACCAACTGGCAGCCAGGCAGCCCCAGAGGA...TTGGACACCATCTCCCAACCCCAGGGACTCGGGCAAGGGTGCCGAAGATAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396743.7
ENST00000455452.5
CDS-3UTR CCA 90 bp GCCTCTTGTCTATCTTCGGCACCCTTGCCCGAGTCCCTGGGGTTGGGAGATGGTAATGTCTCTCTCCTCTaGGGCTGCCTGGCTGCCAGT +
Preference number: 4 (lower is better)
Translates to: ASCLSSAPLPESLGLGDGNVSLL*GCLAAS
Trigger: ACTGGCAGCCAGGCAGCCCCAGAGGAGAGAGACATT...ACCATCTCCCAACCCCAGGGACTCGGGCAAGGGTGCCGAAGATAGACAAGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396743.7
ENST00000455452.5
CDS-3UTR CCA 90 bp TCTGAGGTCAAGCCAAGGTCCGTGCCATTGCATCCTCTGCCCAGAGGCCCGCCCAGGCTCAGACGTTCTTaGGGGTACTGGGAAGGGAAA +
Preference number: 4 (lower is better)
Translates to: SEVKPRSVPLHPLPRGPPRLRRS*GYWEGK
Trigger: TTTCCCTTCCCAGTACCCCCAAGAACGTCTGAGCCT...GGGCGGGCCTCTGGGCAGAGGATGCAATGGCACGGACCTTGGCTTGACCTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR CCA 90 bp CTGCCAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCCCCTTGCCCGAGTCCCTaGGGTTGGGAGATGGTGTCC +
Preference number: 4 (lower is better)
Translates to: LPVGLSLCASCLSSAPLPPCPSP*GWEMVS
Trigger: GGACACCATCTCCCAACCCCAGGGACTCGGGCAAGG...GGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396743.7
ENST00000455452.5
CDS-3UTR TCA 90 bp AGAGGGAAGAAGCCAAAGAAGGTGAGGTGGCACCGGAGAGCAGGAGTACTGGGGCTGCAAACCCTGGTTTaGATGATGGCAGGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: RGKKPKKVRWHRRAGVLGLQTLV*MMAGPA
Trigger: GGCTGGGCCTGCCATCATTCAAACCAGGGTTTGCAG...CCCCAGTACTCCTGCTCTCCGGTGCCACCTCACCTTCTTTGGCTTCTTCCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000428668.2
ENST00000610466.4
CDS-3UTR TCA 90 bp TGCCAAGGCTGCTCCCACACTCCCTACACTCAAATCCCGGGTGGCAGCCATAATCGAGCCTGTTTCTCCTaGTCCCGCAACCACTGCAGG +
Preference number: 4 (lower is better)
Translates to: CQGCSHTPYTQIPGGSHNRACFS*SRNHCR
Trigger: CCTGCAGTGGTTGCGGGATCAGGAGAAACAGGCTCG...ATTATGGCTGCCACCCGGGATTTGAGTGTAGGGAGTGTGGGAGCAGCCTTGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR GCA 90 bp TGCCAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCCGAGCCTCGATGCGTGCTaGAGCCGCCTCATACTCGTC +
Preference number: 4 (lower is better)
Translates to: CQLVCLCVPLVYLRHPCPSLDAC*SRLILV
Trigger: GACGAGTATGAGGCGGCTGCAGCACGCATCGAGGCT...CGGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR GCA 90 bp CTGCCAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCCAGCCTCGATGCGTGCTaGAGCCGCCTCATACTCGTC +
Preference number: 4 (lower is better)
Translates to: LPVGLSLCASCLSSAPLPSLDAC*SRLILV
Trigger: GACGAGTATGAGGCGGCTGCAGCACGCATCGAGGCT...GGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR GCA 90 bp ATGAGGGGCAGGGAGACTTTCCTCTGTCTGAATGTCTCTCTCCTCTGGGGCTGCAGCCTCGATGCGTGCTaGAGCCGCCTCATACTCGTC +
Preference number: 4 (lower is better)
Translates to: MRGRETFLCLNVSLLWGCSLDAC*SRLILV
Trigger: GACGAGTATGAGGCGGCTGCAGCACGCATCGAGGCT...GCAGCCCCAGAGGAGAGAGACATTCAGACAGAGGAAAGTCTCCCTGCCCCTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR GCA 90 bp ACAAACTCCAGGCCCCCAGACAGACCCTGCTGGAGAGCATTCACACCTCTGAGGCATAGCCTCGATGCGTaGTGCAGCCGCCTCATACTC +
Preference number: 4 (lower is better)
Translates to: TNSRPPDRPCWRAFTPLRHSLDA*CSRLIL
Trigger: GAGTATGAGGCGGCTGCAGCACGCATCGAGGCTATG...CCTCAGAGGTGTGAATGCTCTCCAGCAGGGTCTGTCTGGGGGCCTGGAGTTTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR GCA 90 bp GAAGAAGCCAAAGAAGGTGAGGTGGCACCGGAGAGCAGGAGTACTGGGGTTGGGCATAGCCTCGATGCGTaGTGCAGCCGCCTCATACTC +
Preference number: 4 (lower is better)
Translates to: EEAKEGEVAPESRSTGVGHSLDA*CSRLIL
Trigger: GAGTATGAGGCGGCTGCAGCACGCATCGAGGCTATG...CCCAACCCCAGTACTCCTGCTCTCCGGTGCCACCTCACCTTCTTTGGCTTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000610466.4
CDS-3UTR GCA 90 bp GCCCTGCCCTTGCCCAGTGCACACCCTAGACCCTGGGCCGGCCTCCATGCAGCTTCATCAGATAGTCCATaGAATGCTTTCGCACAACCT +
Preference number: 4 (lower is better)
Translates to: ALPLPSAHPRPWAGLHAASSDSP*NAFAQP
Trigger: AGGTTGTGCGAAAGCATTGCATGGACTATCTGATGA...AGCTGCATGGAGGCCGGCCCAGGGTCTAGGGTGTGCACTGGGCAAGGGCAGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR GCA 90 bp TCTGAGGTCAAGCCAAGGTCCGTGCCATTGCATCCTCTGCCCAGAGGCCCGCCCATCTCTGCCATGGCCTaGATCTCAATGTGGTTGCCA +
Preference number: 4 (lower is better)
Translates to: SEVKPRSVPLHPLPRGPPISAMA*ISMWLP
Trigger: TGGCAACCACATTGAGATGCAGGCCATGGCAGAGAT...GGGCGGGCCTCTGGGCAGAGGATGCAATGGCACGGACCTTGGCTTGACCTCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR GCA 90 bp CAGGGTTTCATTGTCCAAGCCGGCCTGACACCTGCCGCCCTGCCCTTGCCCAGTATCTCTGCCATGGCCTaGATCTCAATGTGGTTGCCA +
Preference number: 4 (lower is better)
Translates to: QGFIVQAGLTPAALPLPSISAMA*ISMWLP
Trigger: TGGCAACCACATTGAGATGCAGGCCATGGCAGAGAT...ACTGGGCAAGGGCAGGGCGGCAGGTGTCAGGCCGGCTTGGACAATGAAACCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR GCA 90 bp TGCCAAGGCTGCTCCCACACTCCCTACACTCAAATCCCGGGTGGCAGCCATAATCTGCTGTGGCCGAACTaGATGTGGCGCTGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: CQGCSHTPYTQIPGGSHNLLWPN*MWRWLS
Trigger: GGAAAGCCAGCGCCACATGCAGTTCGGCCACAGCAG...ATTATGGCTGCCACCCGGGATTTGAGTGTAGGGAGTGTGGGAGCAGCCTTGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR GCA 90 bp GCATTCACACCTCTGAGGTCAAGCCAAGGTCCGTGCCATTGCATCCTCTGCCCACTGCTGTGGCCGAACTaGATGTGGCGCTGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: AFTPLRSSQGPCHCILCPLLWPN*MWRWLS
Trigger: GGAAAGCCAGCGCCACATGCAGTTCGGCCACAGCAG...TGGGCAGAGGATGCAATGGCACGGACCTTGGCTTGACCTCAGAGGTGTGAATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR GCA 90 bp TGCCAAGGCTGCTCCCACACTCCCTACACTCAAATCCCGGGTGGCAGCCATAATGCCACTGGAGGCTGCTaGTGTGGCCGAACTGCATGT +
Preference number: 4 (lower is better)
Translates to: CQGCSHTPYTQIPGGSHNATGGC*CGRTAC
Trigger: ACATGCAGTTCGGCCACAGCAGCAGCCTCCAGTGGC...ATTATGGCTGCCACCCGGGATTTGAGTGTAGGGAGTGTGGGAGCAGCCTTGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR GCA 90 bp TGCCAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCCGGCCACTGGAGGCTGCTaGTGTGGCCGAACTGCATGT +
Preference number: 4 (lower is better)
Translates to: CQLVCLCVPLVYLRHPCPATGGC*CGRTAC
Trigger: ACATGCAGTTCGGCCACAGCAGCAGCCTCCAGTGGC...CGGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR GCA 90 bp AGGGGCAGGGAGACTTTCCTCTGTCTGAATGTCTCTCTCCTCTGGGGCTGCCTGGCATGCAGCTCAGGGTaGTCAGGTGACGAGGCTGAA +
Preference number: 4 (lower is better)
Translates to: RGRETFLCLNVSLLWGCLACSSG*SGDEAE
Trigger: TTCAGCCTCGTCACCTGAGCACCCTGAGCTGCATGC...CAGGCAGCCCCAGAGGAGAGAGACATTCAGACAGAGGAAAGTCTCCCTGCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR GCA 90 bp GAAGAAGCCAAAGAAGGTGAGGTGGCACCGGAGAGCAGGAGTACTGGGGTTGGGGCATGCAGCTCAGGGTaGTCAGGTGACGAGGCTGAA +
Preference number: 4 (lower is better)
Translates to: EEAKEGEVAPESRSTGVGACSSG*SGDEAE
Trigger: TTCAGCCTCGTCACCTGAGCACCCTGAGCTGCATGC...CCCAACCCCAGTACTCCTGCTCTCCGGTGCCACCTCACCTTCTTTGGCTTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000428668.2
ENST00000610466.4
CDS-3UTR GCA 90 bp GATAGTGGCAGCGGCAATGAGAGAGAGTGCAGGGGTGGGCTAGCCAGAGGGAAGGGGAAGGGGGCTTCATaGCCAATTCAGCATGCAGCT +
Preference number: 4 (lower is better)
Translates to: DSGSGNERECRGGLARGKGKGAS*PIQHAA
Trigger: AGCTGCATGCTGAATTGGGCATGAAGCCCCCTTCCC...CTTCCCTCTGGCTAGCCCACCCCTGCACTCTCTCTCATTGCCGCTGCCACTATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000428668.2
ENST00000610466.4
CDS-3UTR GCA 90 bp AGGGGCAGGGAGACTTTCCTCTGTCTGAATGTCTCTCTCCTCTGGGGCTGCCTGCTGCCGAGAACTGACTaGTTGTACCTGGCGCACAGG +
Preference number: 4 (lower is better)
Translates to: RGRETFLCLNVSLLWGCLLPRTD*LYLAHR
Trigger: CCTGTGCGCCAGGTACAAGCAGTCAGTTCTCGGCAG...CAGGCAGCCCCAGAGGAGAGAGACATTCAGACAGAGGAAAGTCTCCCTGCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR GCA 90 bp GAAGAAGCCAAAGAAGGTGAGGTGGCACCGGAGAGCAGGAGTACTGGGGTTGGGCTGCCGAGAACTGACTaGTTGTACCTGGCGCACAGG +
Preference number: 4 (lower is better)
Translates to: EEAKEGEVAPESRSTGVGLPRTD*LYLAHR
Trigger: CCTGTGCGCCAGGTACAAGCAGTCAGTTCTCGGCAG...CCCAACCCCAGTACTCCTGCTCTCCGGTGCCACCTCACCTTCTTTGGCTTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000428668.2
ENST00000610466.4
CDS-3UTR GCA 90 bp CAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCCGAGTTGCCCGGTCGGCCCCTaGCGAGAACTGACTGCTTGT +
Preference number: 4 (lower is better)
Translates to: QLVCLCVPLVYLRHPCPSCPVGP*RELTAC
Trigger: ACAAGCAGTCAGTTCTCGGCAGGGGCCGACCGGGCA...ACTCGGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR GCA 90 bp GAAGAAGCCAAAGAAGGTGAGGTGGCACCGGAGAGCAGGAGTACTGGGGTTGGGGAGTCCCCTGTGGAATaGAGGGATGGTTCTGTGCGG +
Preference number: 4 (lower is better)
Translates to: EEAKEGEVAPESRSTGVGESPVE*RDGSVR
Trigger: CCGCACAGAACCATCCCTGCATTCCACAGGGGACTC...CCCAACCCCAGTACTCCTGCTCTCCGGTGCCACCTCACCTTCTTTGGCTTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000610466.4
CDS-3UTR GCA 90 bp TGCCTCTTGTCTATCTTCGGCACCCTTGCCCGAGTCCCTGGGGTTGGGAGATGGGCCTGCCCAGAAAGATaGCACCTTCACAGAGCCAGT +
Preference number: 4 (lower is better)
Translates to: CLLSIFGTLARVPGVGRWACPER*HLHRAS
Trigger: ACTGGCTCTGTGAAGGTGGCATCTTTCTGGGCAGGC...CCATCTCCCAACCCCAGGGACTCGGGCAAGGGTGCCGAAGATAGACAAGAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396743.7
ENST00000455452.5
CDS-3UTR GCA 90 bp CTGCCAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCCCCATGCCCCATGGCCTaGCTGCCCAGAAAGATGCCA +
Preference number: 4 (lower is better)
Translates to: LPVGLSLCASCLSSAPLPPCPMA*LPRKMP
Trigger: TGGCATCTTTCTGGGCAGGCAGGCCATGGGGCATGG...GGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTGGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR GCA 90 bp ACGGGTGCCCCATCTGCCAAGGCTGCTCCCACACTCCCTACACTCAAATCCCGGAGCAACCCATATCTTTaGACCCTCCTCCATGCCCCA +
Preference number: 4 (lower is better)
Translates to: TGAPSAKAAPTLPTLKSRSNPYL*TLLHAP
Trigger: TGGGGCATGGAGGAGGGTGCAAAGATATGGGTTGCT...CCGGGATTTGAGTGTAGGGAGTGTGGGAGCAGCCTTGGCAGATGGGGCACCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR GCA 90 bp TGGCTGCCAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCACGGGTGCCCCATCTaGCAAGGCTGCTCCCACACT +
Preference number: 4 (lower is better)
Translates to: WLPVGLSLCASCLSSAPLHGCPI*QGCSHT
Trigger: AGTGTGGGAGCAGCCTTGGCAGATGGGGCACCCGTG...CAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTGGCAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR GCA 90 bp GCATTCACACCTCTGAGGTCAAGCCAAGGTCCGTGCCATTGCATCCTCTGCCCACAAGGTCCGTGCCATTaGATCCTCTGCCCAGAGGCC +
Preference number: 4 (lower is better)
Translates to: AFTPLRSSQGPCHCILCPQGPCH*ILCPEA
Trigger: GGCCTCTGGGCAGAGGATGCAATGGCACGGACCTTG...TGGGCAGAGGATGCAATGGCACGGACCTTGGCTTGACCTCAGAGGTGTGAATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR GCA 90 bp TGCCAAGGCTGCTCCCACACTCCCTACACTCAAATCCCGGGTGGCAGCCATAATTATCTTCGGCACCCTTaGCCGAGTCCCTGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: CQGCSHTPYTQIPGGSHNYLRHP*PSPWGW
Trigger: CCAACCCCAGGGACTCGGGCAAGGGTGCCGAAGATA...ATTATGGCTGCCACCCGGGATTTGAGTGTAGGGAGTGTGGGAGCAGCCTTGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396743.7
ENST00000455452.5
CDS-3UTR CCA 90 bp AGAGGGAAGAAGCCAAAGAAGGTGAGGTGGCACCGGAGAGCAGGAGTACTGGGGCGATGGCTTCATTTGTaGCCTCCCAGTCTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: RGKKPKKVRWHRRAGVLGRWLHL*PPSLWP
Trigger: GGGCCACAGACTGGGAGGCCACAAATGAAGCCATCG...CCCCAGTACTCCTGCTCTCCGGTGCCACCTCACCTTCTTTGGCTTCTTCCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000428668.2
ENST00000610466.4
CDS-3UTR CCA 90 bp AGGGGCAGGGAGACTTTCCTCTGTCTGAATGTCTCTCTCCTCTGGGGCTGCCTGCGATGGCTTCATTTGTaGCCTCCCAGTCTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: RGRETFLCLNVSLLWGCLRWLHL*PPSLWP
Trigger: GGGCCACAGACTGGGAGGCCACAAATGAAGCCATCG...CAGGCAGCCCCAGAGGAGAGAGACATTCAGACAGAGGAAAGTCTCCCTGCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR CCA 90 bp TGTCTATCTTCGGCACCCTTGCCCGAGTCCCTGGGGTTGGGAGATGGTGTCCAACCACCTGCTCCTCGATaGCTTCATTTGTGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: CLSSAPLPESLGLGDGVQPPAPR*LHLWPP
Trigger: GGGAGGCCACAAATGAAGCCATCGAGGAGCAGGTGG...TTGGACACCATCTCCCAACCCCAGGGACTCGGGCAAGGGTGCCGAAGATAGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396743.7
ENST00000455452.5
CDS-3UTR CCA 90 bp GAAGAAGCCAAAGAAGGTGAGGTGGCACCGGAGAGCAGGAGTACTGGGGTTGGGCCACCTGCTCCTCGATaGCTTCATTTGTGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: EEAKEGEVAPESRSTGVGPPAPR*LHLWPP
Trigger: GGGAGGCCACAAATGAAGCCATCGAGGAGCAGGTGG...CCCAACCCCAGTACTCCTGCTCTCCGGTGCCACCTCACCTTCTTTGGCTTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000428668.2
ENST00000610466.4
CDS-3UTR CCA 90 bp GTCTATCTTCGGCACCCTTGCCCGAGTCCCTGGGGTTGGGAGATGGTGTCCAATCCACCTGCTCCTCGATaGCTTCATTTGTGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: VYLRHPCPSPWGWEMVSNPPAPR*LHLWPP
Trigger: GGGAGGCCACAAATGAAGCCATCGAGGAGCAGGTGG...ATTGGACACCATCTCCCAACCCCAGGGACTCGGGCAAGGGTGCCGAAGATAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396743.7
ENST00000455452.5
CDS-3UTR CCA 90 bp TGGCTGCCAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGTGGCCGAACTGCATGTaGCGCTGGCTTTCCGGGGCT +
Preference number: 4 (lower is better)
Translates to: WLPVGLSLCASCLSSAPLWPNCM*RWLSGA
Trigger: AGCCCCGGAAAGCCAGCGCCACATGCAGTTCGGCCA...CAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTGGCAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR CCA 90 bp TGCCAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCCGCTGACTGCTTGTACCTaGCGCACAGGGCGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: CQLVCLCVPLVYLRHPCPLTACT*RTGRRR
Trigger: CCTCCTTCGCCCTGTGCGCCAGGTACAAGCAGTCAG...CGGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR CCA 90 bp GTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCCGAGTCCCTGGCCATCAACTCTTGTCTaGGGGCGGGTCTCTGTGCAC +
Preference number: 4 (lower is better)
Translates to: VCLCVPLVYLRHPCPSPWPSTLV*GRVSVH
Trigger: GTGCACAGAGACCCGCCCCCAGACAAGAGTTGATGG...CCAGGGACTCGGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396743.7
ENST00000455452.5
CDS-3UTR CCA 90 bp AGAGGGAAGAAGCCAAAGAAGGTGAGGTGGCACCGGAGAGCAGGAGTACTGGGGCCATCAACTCTTGTCTaGGGGCGGGTCTCTGTGCAC +
Preference number: 4 (lower is better)
Translates to: RGKKPKKVRWHRRAGVLGPSTLV*GRVSVH
Trigger: GTGCACAGAGACCCGCCCCCAGACAAGAGTTGATGG...CCCCAGTACTCCTGCTCTCCGGTGCCACCTCACCTTCTTTGGCTTCTTCCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000428668.2
ENST00000610466.4
CDS-3UTR CCA 90 bp GTCTATCTTCGGCACCCTTGCCCGAGTCCCTGGGGTTGGGAGATGGTGTCCAATCCATCAACTCTTGTCTaGGGGCGGGTCTCTGTGCAC +
Preference number: 4 (lower is better)
Translates to: VYLRHPCPSPWGWEMVSNPSTLV*GRVSVH
Trigger: GTGCACAGAGACCCGCCCCCAGACAAGAGTTGATGG...ATTGGACACCATCTCCCAACCCCAGGGACTCGGGCAAGGGTGCCGAAGATAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396743.7
ENST00000455452.5
CDS-3UTR CCA 90 bp ACACCTCTGAGGTCAAGCCAAGGTCCGTGCCATTGCATCCTCTGCCCAGAGGCCCAGGAGTACTGGGGTTaGGAGATGGTGTCCAATCCC +
Preference number: 4 (lower is better)
Translates to: TPLRSSQGPCHCILCPEAQEYWG*EMVSNP
Trigger: GGGATTGGACACCATCTCCCAACCCCAGTACTCCTG...GGCCTCTGGGCAGAGGATGCAATGGCACGGACCTTGGCTTGACCTCAGAGGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376488.8
CDS-3UTR CCA 90 bp GATAGTGGCAGCGGCAATGAGAGAGAGTGCAGGGGTGGGCTAGCCAGAGGGAAGCAGGAGTACTGGGGTTaGGAGATGGTGTCCAATCCC +
Preference number: 4 (lower is better)
Translates to: DSGSGNERECRGGLARGKQEYWG*EMVSNP
Trigger: GGGATTGGACACCATCTCCCAACCCCAGTACTCCTG...CTTCCCTCTGGCTAGCCCACCCCTGCACTCTCTCTCATTGCCGCTGCCACTATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000428668.2
ENST00000610466.4
CDS-3UTR CCA 90 bp GAAGAAGCCAAAGAAGGTGAGGTGGCACCGGAGAGCAGGAGTACTGGGGTTGGGGGAGAGCAGGAGTACTaGGGTTGGGAGATGGTGTCC +
Preference number: 4 (lower is better)
Translates to: EEAKEGEVAPESRSTGVGGEQEY*GWEMVS
Trigger: GGACACCATCTCCCAACCCCAGTACTCCTGCTCTCC...CCCAACCCCAGTACTCCTGCTCTCCGGTGCCACCTCACCTTCTTTGGCTTCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000428668.2
ENST00000610466.4
CDS-3UTR CCA 90 bp ATGAGGGGCAGGGAGACTTTCCTCTGTCTGAATGTCTCTCTCCTCTGGGGCTGCTCCTCTGGGGCTGCCTaGCTGCCAGTTGGTCTGTCT +
Preference number: 4 (lower is better)
Translates to: MRGRETFLCLNVSLLWGCSSGAA*LPVGLS
Trigger: AGACAGACCAACTGGCAGCCAGGCAGCCCCAGAGGA...GCAGCCCCAGAGGAGAGAGACATTCAGACAGAGGAAAGTCTCCCTGCCCCTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR CCA 90 bp GAAGAAGCCAAAGAAGGTGAGGTGGCACCGGAGAGCAGGAGTACTGGGGTTGGGAATGTCTCTCTCCTCTaGGGCTGCCTGGCTGCCAGT +
Preference number: 4 (lower is better)
Translates to: EEAKEGEVAPESRSTGVGNVSLL*GCLAAS
Trigger: ACTGGCAGCCAGGCAGCCCCAGAGGAGAGAGACATT...CCCAACCCCAGTACTCCTGCTCTCCGGTGCCACCTCACCTTCTTTGGCTTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000610466.4
CDS-3UTR CCA 90 bp GCATTCACACCTCTGAGGTCAAGCCAAGGTCCGTGCCATTGCATCCTCTGCCCACGGCCTCCATGCAGCTaGAGGCCAGAAGACAGCAAC +
Preference number: 4 (lower is better)
Translates to: AFTPLRSSQGPCHCILCPRPPCS*RPEDSN
Trigger: GTTGCTGTCTTCTGGCCTCCAGCTGCATGGAGGCCG...TGGGCAGAGGATGCAATGGCACGGACCTTGGCTTGACCTCAGAGGTGTGAATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR CCA 90 bp AATACAAACTCCAGGCCCCCAGACAGACCCTGCTGGAGAGCATTCACACCTCTGCCTTGCCCGAGTCCCTaGGGTTGGGAGATGGTGTCC +
Preference number: 4 (lower is better)
Translates to: NTNSRPPDRPCWRAFTPLPCPSP*GWEMVS
Trigger: GGACACCATCTCCCAACCCCAGGGACTCGGGCAAGG...CAGAGGTGTGAATGCTCTCCAGCAGGGTCTGTCTGGGGGCCTGGAGTTTGTATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396743.7
CDS-3UTR TCA 90 bp ACGGGTGCCCCATCTGCCAAGGCTGCTCCCACACTCCCTACACTCAAATCCCGGTCCCATGGAATGTGTTaGTGGGTTCCACTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: TGAPSAKAAPTLPTLKSRSHGMC*WVPLQK
Trigger: CTTCTGCAGTGGAACCCATCAACACATTCCATGGGA...CCGGGATTTGAGTGTAGGGAGTGTGGGAGCAGCCTTGGCAGATGGGGCACCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156084.8
ENST00000455452.5
CDS-3UTR TCA 90 bp TGCCAAGGCTGCTCCCACACTCCCTACACTCAAATCCCGGGTGGCAGCCATAATCTGCAAACCCTGGTTTaGATGATGGCAGGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: CQGCSHTPYTQIPGGSHNLQTLV*MMAGPA
Trigger: GGCTGGGCCTGCCATCATTCAAACCAGGGTTTGCAG...ATTATGGCTGCCACCCGGGATTTGAGTGTAGGGAGTGTGGGAGCAGCCTTGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR TCA 90 bp AGGGGCAGGGAGACTTTCCTCTGTCTGAATGTCTCTCTCCTCTGGGGCTGCCTGGAGCATTCACACCTCTaGGGTCAAGCCAAGGTCCGT +
Preference number: 4 (lower is better)
Translates to: RGRETFLCLNVSLLWGCLEHSHL*GQAKVR
Trigger: ACGGACCTTGGCTTGACCTCAGAGGTGTGAATGCTC...CAGGCAGCCCCAGAGGAGAGAGACATTCAGACAGAGGAAAGTCTCCCTGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR GCA 90 bp CAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCCGAGTCTCACTGTTGTAGCCTaGGCCGACCTCCTCACGCTC +
Preference number: 4 (lower is better)
Translates to: QLVCLCVPLVYLRHPCPSLTVVA*ADLLTL
Trigger: GAGCGTGAGGAGGTCGGCGCAGGCTACAACAGTGAG...ACTCGGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR GCA 90 bp TGGCTGCCAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCTCACTGTTGTAGCCTaGGCCGACCTCCTCACGCTC +
Preference number: 4 (lower is better)
Translates to: WLPVGLSLCASCLSSAPLLTVVA*ADLLTL
Trigger: GAGCGTGAGGAGGTCGGCGCAGGCTACAACAGTGAG...CAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTGGCAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR GCA 90 bp GAAGAAGCCAAAGAAGGTGAGGTGGCACCGGAGAGCAGGAGTACTGGGGTTGGGTCAAACCAATGCTCCTaGTGCTCGACAGTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: EEAKEGEVAPESRSTGVGSNQCS*CSTVAG
Trigger: CCCTGCCACTGTCGAGCAGCAGGAGCATTGGTTTGA...CCCAACCCCAGTACTCCTGCTCTCCGGTGCCACCTCACCTTCTTTGGCTTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000610466.4
CDS-3UTR GCA 90 bp CAGGGTTTCATTGTCCAAGCCGGCCTGACACCTGCCGCCCTGCCCTTGCCCAGTTTTCGCACAACCTCATaGATGTCCTGGTCTCCATAC +
Preference number: 4 (lower is better)
Translates to: QGFIVQAGLTPAALPLPSFRTTS*MSWSPY
Trigger: GTATGGAGACCAGGACATGCATGAGGTTGTGCGAAA...ACTGGGCAAGGGCAGGGCGGCAGGTGTCAGGCCGGCTTGGACAATGAAACCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR GCA 90 bp TCAGGGTTTCATTGTCCAAGCCGGCCTGACACCTGCCGCCCTGCCCTTGCCCAGACGGTTGTACATCTCTaGCATGGCCTGCATCTCAAT +
Preference number: 4 (lower is better)
Translates to: SGFHCPSRPDTCRPALAQTVVHL*HGLHLN
Trigger: ATTGAGATGCAGGCCATGGCAGAGATGTACAACCGT...CTGGGCAAGGGCAGGGCGGCAGGTGTCAGGCCGGCTTGGACAATGAAACCCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR GCA 90 bp TGGCTGCCAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGGCCACTGGAGGCTGCTaGTGTGGCCGAACTGCATGT +
Preference number: 4 (lower is better)
Translates to: WLPVGLSLCASCLSSAPLATGGC*CGRTAC
Trigger: ACATGCAGTTCGGCCACAGCAGCAGCCTCCAGTGGC...CAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTGGCAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR GCA 90 bp ACCCTGCTGGAGAGCATTCACACCTCTGAGGTCAAGCCAAGGTCCGTGCCATTGGCATGCAGCTCAGGGTaGTCAGGTGACGAGGCTGAA +
Preference number: 4 (lower is better)
Translates to: TLLESIHTSEVKPRSVPLACSSG*SGDEAE
Trigger: TTCAGCCTCGTCACCTGAGCACCCTGAGCTGCATGC...CAATGGCACGGACCTTGGCTTGACCTCAGAGGTGTGAATGCTCTCCAGCAGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR GCA 90 bp GTCTATCTTCGGCACCCTTGCCCGAGTCCCTGGGGTTGGGAGATGGTGTCCAATGGGAAGGGGGCTTCATaGCCAATTCAGCATGCAGCT +
Preference number: 4 (lower is better)
Translates to: VYLRHPCPSPWGWEMVSNGKGAS*PIQHAA
Trigger: AGCTGCATGCTGAATTGGGCATGAAGCCCCCTTCCC...ATTGGACACCATCTCCCAACCCCAGGGACTCGGGCAAGGGTGCCGAAGATAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396743.7
ENST00000455452.5
CDS-3UTR GCA 90 bp AGGGGCAGGGAGACTTTCCTCTGTCTGAATGTCTCTCTCCTCTGGGGCTGCCTGTATCTTCGGCACCCTTaGCCGAGTCCCCTGTGGAAT +
Preference number: 4 (lower is better)
Translates to: RGRETFLCLNVSLLWGCLYLRHP*PSPLWN
Trigger: ATTCCACAGGGGACTCGGGCAAGGGTGCCGAAGATA...CAGGCAGCCCCAGAGGAGAGAGACATTCAGACAGAGGAAAGTCTCCCTGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000610466.4
CDS-3UTR GCA 90 bp CAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCCGAGTCAAGGTCCGTGCCATTaGATCCTCTGCCCAGAGGCC +
Preference number: 4 (lower is better)
Translates to: QLVCLCVPLVYLRHPCPSQGPCH*ILCPEA
Trigger: GGCCTCTGGGCAGAGGATGCAATGGCACGGACCTTG...ACTCGGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR GCA 90 bp AACTCCAGGCCCCCAGACAGACCCTGCTGGAGAGCATTCACACCTCTGAGGTCATCAAGCCAAGGTCCGTaGCATTGCATCCTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: NSRPPDRPCWRAFTPLRSSSQGP*HCILCP
Trigger: TGGGCAGAGGATGCAATGGCACGGACCTTGGCTTGA...TGACCTCAGAGGTGTGAATGCTCTCCAGCAGGGTCTGTCTGGGGGCCTGGAGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR GCA 90 bp GAAGAAGCCAAAGAAGGTGAGGTGGCACCGGAGAGCAGGAGTACTGGGGTTGGGGCCTTTTCAAACCAATaGTCCTGCTGCAGGCGTCGG +
Preference number: 4 (lower is better)
Translates to: EEAKEGEVAPESRSTGVGAFSNQ*SCCRRR
Trigger: CCGACGCCTGCAGCAGGAGCATTGGTTTGAAAAGGC...CCCAACCCCAGTACTCCTGCTCTCCGGTGCCACCTCACCTTCTTTGGCTTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000428668.2
CDS-3UTR CCA 90 bp AGGGGCAGGGAGACTTTCCTCTGTCTGAATGTCTCTCTCCTCTGGGGCTGCCTGTGGTCTCCATACACCTaGTCAGCTACAGCCCGGAAG +
Preference number: 4 (lower is better)
Translates to: RGRETFLCLNVSLLWGCLWSPYT*SATARK
Trigger: CTTCCGGGCTGTAGCTGACCAGGTGTATGGAGACCA...CAGGCAGCCCCAGAGGAGAGAGACATTCAGACAGAGGAAAGTCTCCCTGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR CCA 90 bp AGAGGGAAGAAGCCAAAGAAGGTGAGGTGGCACCGGAGAGCAGGAGTACTGGGGTGGTCTCCATACACCTaGTCAGCTACAGCCCGGAAG +
Preference number: 4 (lower is better)
Translates to: RGKKPKKVRWHRRAGVLGWSPYT*SATARK
Trigger: CTTCCGGGCTGTAGCTGACCAGGTGTATGGAGACCA...CCCCAGTACTCCTGCTCTCCGGTGCCACCTCACCTTCTTTGGCTTCTTCCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000428668.2
ENST00000610466.4
CDS-3UTR CCA 90 bp CAGGGTTTCATTGTCCAAGCCGGCCTGACACCTGCCGCCCTGCCCTTGCCCAGTTGTACATCTCTGCCATaGCCTGCATCTCAATGTGGT +
Preference number: 4 (lower is better)
Translates to: QGFIVQAGLTPAALPLPSCTSLP*PASQCG
Trigger: ACCACATTGAGATGCAGGCCATGGCAGAGATGTACA...ACTGGGCAAGGGCAGGGCGGCAGGTGTCAGGCCGGCTTGGACAATGAAACCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR CCA 90 bp TGCCAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCCGCGATGGCTTCATTTGTaGCCTCCCAGTCTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: CQLVCLCVPLVYLRHPCPRWLHL*PPSLWP
Trigger: GGGCCACAGACTGGGAGGCCACAAATGAAGCCATCG...CGGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR CCA 90 bp TGCCAAGGCTGCTCCCACACTCCCTACACTCAAATCCCGGGTGGCAGCCATAATCGATGGCTTCATTTGTaGCCTCCCAGTCTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: CQGCSHTPYTQIPGGSHNRWLHL*PPSLWP
Trigger: GGGCCACAGACTGGGAGGCCACAAATGAAGCCATCG...ATTATGGCTGCCACCCGGGATTTGAGTGTAGGGAGTGTGGGAGCAGCCTTGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR CCA 90 bp ACCCTGCTGGAGAGCATTCACACCTCTGAGGTCAAGCCAAGGTCCGTGCCATTGCCATCAACTCTTGTCTaGGGGCGGGTCTCTGTGCAC +
Preference number: 4 (lower is better)
Translates to: TLLESIHTSEVKPRSVPLPSTLV*GRVSVH
Trigger: GTGCACAGAGACCCGCCCCCAGACAAGAGTTGATGG...CAATGGCACGGACCTTGGCTTGACCTCAGAGGTGTGAATGCTCTCCAGCAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR CCA 90 bp ATGAGGGGCAGGGAGACTTTCCTCTGTCTGAATGTCTCTCTCCTCTGGGGCTGCCCATCAACTCTTGTCTaGGGGCGGGTCTCTGTGCAC +
Preference number: 4 (lower is better)
Translates to: MRGRETFLCLNVSLLWGCPSTLV*GRVSVH
Trigger: GTGCACAGAGACCCGCCCCCAGACAAGAGTTGATGG...GCAGCCCCAGAGGAGAGAGACATTCAGACAGAGGAAAGTCTCCCTGCCCCTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR CCA 90 bp TGCCAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCCGAATGTCTCTCTCCTCTaGGGCTGCCTGGCTGCCAGT +
Preference number: 4 (lower is better)
Translates to: CQLVCLCVPLVYLRHPCPNVSLL*GCLAAS
Trigger: ACTGGCAGCCAGGCAGCCCCAGAGGAGAGAGACATT...CGGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR CCA 90 bp TGGCTGCCAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCGGCCTCCATGCAGCTaGAGGCCAGAAGACAGCAAC +
Preference number: 4 (lower is better)
Translates to: WLPVGLSLCASCLSSAPLRPPCS*RPEDSN
Trigger: GTTGCTGTCTTCTGGCCTCCAGCTGCATGGAGGCCG...CAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTGGCAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR CCA 90 bp GAAGAAGCCAAAGAAGGTGAGGTGGCACCGGAGAGCAGGAGTACTGGGGTTGGGGGTTCTGTGCTGTACTaGTACACCTCCACAGGACGG +
Preference number: 4 (lower is better)
Translates to: EEAKEGEVAPESRSTGVGGSVLY*YTSTGR
Trigger: CCGTCCTGTGGAGGTGTACCAGTACAGCACAGAACC...CCCAACCCCAGTACTCCTGCTCTCCGGTGCCACCTCACCTTCTTTGGCTTCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376488.8
ENST00000428668.2
ENST00000610466.4
CDS-3UTR CCA 90 bp AGGGGCAGGGAGACTTTCCTCTGTCTGAATGTCTCTCTCCTCTGGGGCTGCCTGGGTTCTGTGCTGTACTaGTACACCTCCACAGGACGG +
Preference number: 4 (lower is better)
Translates to: RGRETFLCLNVSLLWGCLGSVLY*YTSTGR
Trigger: CCGTCCTGTGGAGGTGTACCAGTACAGCACAGAACC...CAGGCAGCCCCAGAGGAGAGAGACATTCAGACAGAGGAAAGTCTCCCTGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376488.8
ENST00000396743.7
ENST00000610466.4
CDS-3UTR CCA 90 bp ACAAACTCCAGGCCCCCAGACAGACCCTGCTGGAGAGCATTCACACCTCTGAGGCCAGACAGACCCTGCTaGAGAGCATTCACACCTCTG +
Preference number: 4 (lower is better)
Translates to: TNSRPPDRPCWRAFTPLRPDRPC*RAFTPL
Trigger: CAGAGGTGTGAATGCTCTCCAGCAGGGTCTGTCTGG...CCTCAGAGGTGTGAATGCTCTCCAGCAGGGTCTGTCTGGGGGCCTGGAGTTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
3UTR CAA 72 bp CTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTaGCCCGAGTCCCTGGGGTTGGGAGATGGTGTCCAA +
Preference number: 4 (lower is better)
Translates to: LSLCASCLSSAP*PESLGLGDGVQ
Trigger: TTGGACACCATCTCCCAACCCCAGGGACTCGGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396743.7
ENST00000455452.5
CDS-3UTR TCA 90 bp GGAGGTTTAATAAGCAGCAAATCAAATACAAACTCCAGGCCCCCAGACAGACCCCCAACCCCGGGAGCTTaGCGTCGCCGCTTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: GGLISSKSNTNSRPPDRPPTPGA*RRRLLC
Trigger: GCACAGCAAGCGGCGACGTCAAGCTCCCGGGGTTGG...GGGTCTGTCTGGGGGCCTGGAGTTTGTATTTGATTTGCTGCTTATTAAACCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR TCA 90 bp ACGGGTGCCCCATCTGCCAAGGCTGCTCCCACACTCCCTACACTCAAATCCCGGGGTTCGTCCTCGTTTTaGTGTATCCCATGGAATGTG +
Preference number: 4 (lower is better)
Translates to: TGAPSAKAAPTLPTLKSRGSSSF*CIPWNV
Trigger: CACATTCCATGGGATACATCAAAACGAGGACGAACC...CCGGGATTTGAGTGTAGGGAGTGTGGGAGCAGCCTTGGCAGATGGGGCACCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR TCA 90 bp AATACAAACTCCAGGCCCCCAGACAGACCCTGCTGGAGAGCATTCACACCTCTGCTGCAAACCCTGGTTTaGATGATGGCAGGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: NTNSRPPDRPCWRAFTPLLQTLV*MMAGPA
Trigger: GGCTGGGCCTGCCATCATTCAAACCAGGGTTTGCAG...CAGAGGTGTGAATGCTCTCCAGCAGGGTCTGTCTGGGGGCCTGGAGTTTGTATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR TCA 90 bp ACACCTCTGAGGTCAAGCCAAGGTCCGTGCCATTGCATCCTCTGCCCAGAGGCCAGACTTTCCTCTGTCTaGATGTCTCTCTCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: TPLRSSQGPCHCILCPEARLSSV*MSLSSG
Trigger: CCCAGAGGAGAGAGACATTCAGACAGAGGAAAGTCT...GGCCTCTGGGCAGAGGATGCAATGGCACGGACCTTGGCTTGACCTCAGAGGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR TCA 90 bp GAAGAAGCCAAAGAAGGTGAGGTGGCACCGGAGAGCAGGAGTACTGGGGTTGGGTCCAGGATTCCAACTTaGACGCTGTCAGCCGGAATG +
Preference number: 4 (lower is better)
Translates to: EEAKEGEVAPESRSTGVGSRIPT*TLSAGM
Trigger: CATTCCGGCTGACAGCGTTCAAGTTGGAATCCTGGA...CCCAACCCCAGTACTCCTGCTCTCCGGTGCCACCTCACCTTCTTTGGCTTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428668.2
CDS-3UTR GCA 90 bp ATCAAATACAAACTCCAGGCCCCCAGACAGACCCTGCTGGAGAGCATTCACACCCTCACTGTTGTAGCCTaGGCCGACCTCCTCACGCTC +
Preference number: 4 (lower is better)
Translates to: IKYKLQAPRQTLLESIHTLTVVA*ADLLTL
Trigger: GAGCGTGAGGAGGTCGGCGCAGGCTACAACAGTGAG...GGTGTGAATGCTCTCCAGCAGGGTCTGTCTGGGGGCCTGGAGTTTGTATTTGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR GCA 90 bp TGCTGGAGAGCATTCACACCTCTGAGGTCAAGCCAAGGTCCGTGCCATTGCATCCATAGCCTCGATGCGTaGTGCAGCCGCCTCATACTC +
Preference number: 4 (lower is better)
Translates to: CWRAFTPLRSSQGPCHCIHSLDA*CSRLIL
Trigger: GAGTATGAGGCGGCTGCAGCACGCATCGAGGCTATG...GATGCAATGGCACGGACCTTGGCTTGACCTCAGAGGTGTGAATGCTCTCCAGCA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR GCA 90 bp GATAGTGGCAGCGGCAATGAGAGAGAGTGCAGGGGTGGGCTAGCCAGAGGGAAGATCTCTGCCATGGCCTaGATCTCAATGTGGTTGCCA +
Preference number: 4 (lower is better)
Translates to: DSGSGNERECRGGLARGKISAMA*ISMWLP
Trigger: TGGCAACCACATTGAGATGCAGGCCATGGCAGAGAT...CTTCCCTCTGGCTAGCCCACCCCTGCACTCTCTCTCATTGCCGCTGCCACTATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000428668.2
ENST00000610466.4
CDS-3UTR GCA 90 bp TCAGGGTTTCATTGTCCAAGCCGGCCTGACACCTGCCGCCCTGCCCTTGCCCAGTTCTTCATCAGAGACTaGTCTGCAAACCCTGGTTTG +
Preference number: 4 (lower is better)
Translates to: SGFHCPSRPDTCRPALAQFFIRD*SANPGL
Trigger: CAAACCAGGGTTTGCAGAGCAGTCTCTGATGAAGAA...CTGGGCAAGGGCAGGGCGGCAGGTGTCAGGCCGGCTTGGACAATGAAACCCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR GCA 90 bp TGGCTGCCAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGGCATGCAGCTCAGGGTaGTCAGGTGACGAGGCTGAA +
Preference number: 4 (lower is better)
Translates to: WLPVGLSLCASCLSSAPLACSSG*SGDEAE
Trigger: TTCAGCCTCGTCACCTGAGCACCCTGAGCTGCATGC...CAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTGGCAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR GCA 90 bp AGGGGCAGGGAGACTTTCCTCTGTCTGAATGTCTCTCTCCTCTGGGGCTGCCTGATGCCCAATTCAGCATaGAGCTCAGGGTGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: RGRETFLCLNVSLLWGCLMPNSA*SSGCSG
Trigger: ACCTGAGCACCCTGAGCTGCATGCTGAATTGGGCAT...CAGGCAGCCCCAGAGGAGAGAGACATTCAGACAGAGGAAAGTCTCCCTGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR GCA 90 bp GTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCCGAGTCCCTGGATGCCCAATTCAGCATaGAGCTCAGGGTGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: VCLCVPLVYLRHPCPSPWMPNSA*SSGCSG
Trigger: ACCTGAGCACCCTGAGCTGCATGCTGAATTGGGCAT...CCAGGGACTCGGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396743.7
ENST00000455452.5
CDS-3UTR GCA 90 bp GAAGAAGCCAAAGAAGGTGAGGTGGCACCGGAGAGCAGGAGTACTGGGGTTGGGATGCCCAATTCAGCATaGAGCTCAGGGTGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: EEAKEGEVAPESRSTGVGMPNSA*SSGCSG
Trigger: ACCTGAGCACCCTGAGCTGCATGCTGAATTGGGCAT...CCCAACCCCAGTACTCCTGCTCTCCGGTGCCACCTCACCTTCTTTGGCTTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000428668.2
ENST00000610466.4
CDS-3UTR GCA 90 bp TGTCTATCTTCGGCACCCTTGCCCGAGTCCCTGGGGTTGGGAGATGGTGTCCAAATGCCCAATTCAGCATaGAGCTCAGGGTGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: CLSSAPLPESLGLGDGVQMPNSA*SSGCSG
Trigger: ACCTGAGCACCCTGAGCTGCATGCTGAATTGGGCAT...TTGGACACCATCTCCCAACCCCAGGGACTCGGGCAAGGGTGCCGAAGATAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396743.7
ENST00000455452.5
CDS-3UTR GCA 90 bp TGCCAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCCGGGGAAGGGGGCTTCATaGCCAATTCAGCATGCAGCT +
Preference number: 4 (lower is better)
Translates to: CQLVCLCVPLVYLRHPCPGKGAS*PIQHAA
Trigger: AGCTGCATGCTGAATTGGGCATGAAGCCCCCTTCCC...CGGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR GCA 90 bp CAGCAAATCAAATACAAACTCCAGGCCCCCAGACAGACCCTGCTGGAGAGCATTTGCCCGGTCGGCCCCTaGCGAGAACTGACTGCTTGT +
Preference number: 4 (lower is better)
Translates to: QQIKYKLQAPRQTLLESICPVGP*RELTAC
Trigger: ACAAGCAGTCAGTTCTCGGCAGGGGCCGACCGGGCA...AATGCTCTCCAGCAGGGTCTGTCTGGGGGCCTGGAGTTTGTATTTGATTTGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR GCA 90 bp ACCCTGCTGGAGAGCATTCACACCTCTGAGGTCAAGCCAAGGTCCGTGCCATTGGCCTGCCCAGAAAGATaGCACCTTCACAGAGCCAGT +
Preference number: 4 (lower is better)
Translates to: TLLESIHTSEVKPRSVPLACPER*HLHRAS
Trigger: ACTGGCTCTGTGAAGGTGGCATCTTTCTGGGCAGGC...CAATGGCACGGACCTTGGCTTGACCTCAGAGGTGTGAATGCTCTCCAGCAGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR GCA 90 bp CAGCAAATCAAATACAAACTCCAGGCCCCCAGACAGACCCTGCTGGAGAGCATTCACGGGTGCCCCATCTaGCAAGGCTGCTCCCACACT +
Preference number: 4 (lower is better)
Translates to: QQIKYKLQAPRQTLLESIHGCPI*QGCSHT
Trigger: AGTGTGGGAGCAGCCTTGGCAGATGGGGCACCCGTG...AATGCTCTCCAGCAGGGTCTGTCTGGGGGCCTGGAGTTTGTATTTGATTTGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR GCA 90 bp GCCCTGCCCTTGCCCAGTGCACACCCTAGACCCTGGGCCGGCCTCCATGCAGCTCATTTGGTTTTATTGTaGCAAGGACATTACAGATGG +
Preference number: 4 (lower is better)
Translates to: ALPLPSAHPRPWAGLHAAHLVLL*QGHYRW
Trigger: CCATCTGTAATGTCCTTGGCACAATAAAACCAAATG...AGCTGCATGGAGGCCGGCCCAGGGTCTAGGGTGTGCACTGGGCAAGGGCAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR GCA 90 bp TGCCAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCCGTCAAGCCAAGGTCCGTaGCATTGCATCCTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: CQLVCLCVPLVYLRHPCPSSQGP*HCILCP
Trigger: TGGGCAGAGGATGCAATGGCACGGACCTTGGCTTGA...CGGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR CCA 90 bp TGCCAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCCGTGGTCTCCATACACCTaGTCAGCTACAGCCCGGAAG +
Preference number: 4 (lower is better)
Translates to: CQLVCLCVPLVYLRHPCPWSPYT*SATARK
Trigger: CTTCCGGGCTGTAGCTGACCAGGTGTATGGAGACCA...CGGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR CCA 90 bp TGCCTCTTGTCTATCTTCGGCACCCTTGCCCGAGTCCCTGGGGTTGGGAGATGGACCTCATGCATGTCCTaGTCTCCATACACCTGGTCA +
Preference number: 4 (lower is better)
Translates to: CLLSIFGTLARVPGVGRWTSCMS*SPYTWS
Trigger: TGACCAGGTGTATGGAGACCAGGACATGCATGAGGT...CCATCTCCCAACCCCAGGGACTCGGGCAAGGGTGCCGAAGATAGACAAGAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396743.7
ENST00000455452.5
CDS-3UTR CCA 90 bp TGCCAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCCGGTACCTGTGCTGTACTaGTACACCTCCACAGGACGG +
Preference number: 4 (lower is better)
Translates to: CQLVCLCVPLVYLRHPCPVPVLY*YTSTGR
Trigger: CCGTCCTGTGGAGGTGTACCAGTACAGCACAGGTAC...CGGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156084.8
ENST00000455452.5
CDS-3UTR CCA 90 bp GAAGAAGCCAAAGAAGGTGAGGTGGCACCGGAGAGCAGGAGTACTGGGGTTGGGTGGCCTCCCAGTCTGTaGCCCGTTTCTTGTCTTCTA +
Preference number: 4 (lower is better)
Translates to: EEAKEGEVAPESRSTGVGWPPSL*PVSCLL
Trigger: TAGAAGACAAGAAACGGGCCACAGACTGGGAGGCCA...CCCAACCCCAGTACTCCTGCTCTCCGGTGCCACCTCACCTTCTTTGGCTTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000428668.2
ENST00000610466.4
CDS-3UTR CCA 90 bp AGAGGGAAGAAGCCAAAGAAGGTGAGGTGGCACCGGAGAGCAGGAGTACTGGGGTGGCCTCCCAGTCTGTaGCCCGTTTCTTGTCTTCTA +
Preference number: 4 (lower is better)
Translates to: RGKKPKKVRWHRRAGVLGWPPSL*PVSCLL
Trigger: TAGAAGACAAGAAACGGGCCACAGACTGGGAGGCCA...CCCCAGTACTCCTGCTCTCCGGTGCCACCTCACCTTCTTTGGCTTCTTCCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000428668.2
ENST00000610466.4
CDS-3UTR CCA 90 bp AGCAAATCAAATACAAACTCCAGGCCCCCAGACAGACCCTGCTGGAGAGCATTCTGGCCGAACTGCATGTaGCGCTGGCTTTCCGGGGCT +
Preference number: 4 (lower is better)
Translates to: SKSNTNSRPPDRPCWRAFWPNCM*RWLSGA
Trigger: AGCCCCGGAAAGCCAGCGCCACATGCAGTTCGGCCA...GAATGCTCTCCAGCAGGGTCTGTCTGGGGGCCTGGAGTTTGTATTTGATTTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR CCA 90 bp GCCTCTTGTCTATCTTCGGCACCCTTGCCCGAGTCCCTGGGGTTGGGAGATGGTAGGGCGAAGGAGGTTTaGCAAGAGCTAAAACAGTGC +
Preference number: 4 (lower is better)
Translates to: ASCLSSAPLPESLGLGDGRAKEV*QELKQC
Trigger: GCACTGTTTTAGCTCTTGCCAAACCTCCTTCGCCCT...ACCATCTCCCAACCCCAGGGACTCGGGCAAGGGTGCCGAAGATAGACAAGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396743.7
ENST00000455452.5
CDS-3UTR CCA 90 bp GATAGTGGCAGCGGCAATGAGAGAGAGTGCAGGGGTGGGCTAGCCAGAGGGAAGAGGGCGAAGGAGGTTTaGCAAGAGCTAAAACAGTGC +
Preference number: 4 (lower is better)
Translates to: DSGSGNERECRGGLARGKRAKEV*QELKQC
Trigger: GCACTGTTTTAGCTCTTGCCAAACCTCCTTCGCCCT...CTTCCCTCTGGCTAGCCCACCCCTGCACTCTCTCTCATTGCCGCTGCCACTATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000428668.2
ENST00000610466.4
CDS-3UTR CCA 90 bp GATAGTGGCAGCGGCAATGAGAGAGAGTGCAGGGGTGGGCTAGCCAGAGGGAAGTCTAGGTATTCCTGTTaGGACACTGCCAGCACCGAA +
Preference number: 4 (lower is better)
Translates to: DSGSGNERECRGGLARGKSRYSC*DTASTE
Trigger: TTCGGTGCTGGCAGTGTCCCAACAGGAATACCTAGA...CTTCCCTCTGGCTAGCCCACCCCTGCACTCTCTCTCATTGCCGCTGCCACTATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000428668.2
ENST00000610466.4
CDS-3UTR CCA 90 bp CTGCCAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCCCAGGAGTACTGGGGTTaGGAGATGGTGTCCAATCCC +
Preference number: 4 (lower is better)
Translates to: LPVGLSLCASCLSSAPLPQEYWG*EMVSNP
Trigger: GGGATTGGACACCATCTCCCAACCCCAGTACTCCTG...GGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000610466.4
CDS-3UTR CCA 90 bp CAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCCGAGTGGAGAGCAGGAGTACTaGGGTTGGGAGATGGTGTCC +
Preference number: 4 (lower is better)
Translates to: QLVCLCVPLVYLRHPCPSGEQEY*GWEMVS
Trigger: GGACACCATCTCCCAACCCCAGTACTCCTGCTCTCC...ACTCGGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000610466.4
CDS-3UTR CCA 90 bp TGCTGGAGAGCATTCACACCTCTGAGGTCAAGCCAAGGTCCGTGCCATTGCATCGGAGAGCAGGAGTACTaGGGTTGGGAGATGGTGTCC +
Preference number: 4 (lower is better)
Translates to: CWRAFTPLRSSQGPCHCIGEQEY*GWEMVS
Trigger: GGACACCATCTCCCAACCCCAGTACTCCTGCTCTCC...GATGCAATGGCACGGACCTTGGCTTGACCTCAGAGGTGTGAATGCTCTCCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376488.8
CDS-3UTR CCA 90 bp ACCCTGCTGGAGAGCATTCACACCTCTGAGGTCAAGCCAAGGTCCGTGCCATTGTGTGGAATGCAGGGATaGTTCTGTGCGGGATGGGGT +
Preference number: 4 (lower is better)
Translates to: TLLESIHTSEVKPRSVPLCGMQG*FCAGWG
Trigger: ACCCCATCCCGCACAGAACCATCCCTGCATTCCACA...CAATGGCACGGACCTTGGCTTGACCTCAGAGGTGTGAATGCTCTCCAGCAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376488.8
CDS-3UTR CCA 90 bp TGCTGGAGAGCATTCACACCTCTGAGGTCAAGCCAAGGTCCGTGCCATTGCATCAATGTCTCTCTCCTCTaGGGCTGCCTGGCTGCCAGT +
Preference number: 4 (lower is better)
Translates to: CWRAFTPLRSSQGPCHCINVSLL*GCLAAS
Trigger: ACTGGCAGCCAGGCAGCCCCAGAGGAGAGAGACATT...GATGCAATGGCACGGACCTTGGCTTGACCTCAGAGGTGTGAATGCTCTCCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR CCA 90 bp ACACCTCTGAGGTCAAGCCAAGGTCCGTGCCATTGCATCCTCTGCCCAGAGGCCCGTTCTTGGGGGTACTaGGAAGGGAAATTTCCCACT +
Preference number: 4 (lower is better)
Translates to: TPLRSSQGPCHCILCPEARSWGY*EGKFPT
Trigger: AGTGGGAAATTTCCCTTCCCAGTACCCCCAAGAACG...GGCCTCTGGGCAGAGGATGCAATGGCACGGACCTTGGCTTGACCTCAGAGGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR CCA 90 bp AGGGGCAGGGAGACTTTCCTCTGTCTGAATGTCTCTCTCCTCTGGGGCTGCCTGAGGCTCAGACGTTCTTaGGGGTACTGGGAAGGGAAA +
Preference number: 4 (lower is better)
Translates to: RGRETFLCLNVSLLWGCLRLRRS*GYWEGK
Trigger: TTTCCCTTCCCAGTACCCCCAAGAACGTCTGAGCCT...CAGGCAGCCCCAGAGGAGAGAGACATTCAGACAGAGGAAAGTCTCCCTGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR CCA 90 bp TCAGGGTTTCATTGTCCAAGCCGGCCTGACACCTGCCGCCCTGCCCTTGCCCAGCAAGGACATTACAGATaGCGGATCTTGTCAACACCT +
Preference number: 4 (lower is better)
Translates to: SGFHCPSRPDTCRPALAQQGHYR*RILSTP
Trigger: AGGTGTTGACAAGATCCGCCATCTGTAATGTCCTTG...CTGGGCAAGGGCAGGGCGGCAGGTGTCAGGCCGGCTTGGACAATGAAACCCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR CCA 90 bp ACCCTGCTGGAGAGCATTCACACCTCTGAGGTCAAGCCAAGGTCCGTGCCATTGCCAGACAGACCCTGCTaGAGAGCATTCACACCTCTG +
Preference number: 4 (lower is better)
Translates to: TLLESIHTSEVKPRSVPLPDRPC*RAFTPL
Trigger: CAGAGGTGTGAATGCTCTCCAGCAGGGTCTGTCTGG...CAATGGCACGGACCTTGGCTTGACCTCAGAGGTGTGAATGCTCTCCAGCAGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR TCA 90 bp TGTCTATCTTCGGCACCCTTGCCCGAGTCCCTGGGGTTGGGAGATGGTGTCCAATCCCATGGAATGTGTTaGTGGGTTCCACTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: CLSSAPLPESLGLGDGVQSHGMC*WVPLQK
Trigger: CTTCTGCAGTGGAACCCATCAACACATTCCATGGGA...TTGGACACCATCTCCCAACCCCAGGGACTCGGGCAAGGGTGCCGAAGATAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455452.5
CDS-3UTR TCA 90 bp GGTCAGGGTTTCATTGTCCAAGCCGGCCTGACACCTGCCGCCCTGCCCTTGCCCGTTAGGATTCACCACTaGATTATAGTGGATATTCCG +
Preference number: 4 (lower is better)
Translates to: GQGFIVQAGLTPAALPLPVRIHH*IIVDIP
Trigger: CGGAATATCCACTATAATTCAGTGGTGAATCCTAAC...GGGCAAGGGCAGGGCGGCAGGTGTCAGGCCGGCTTGGACAATGAAACCCTGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR TCA 90 bp AGAGGGAAGAAGCCAAAGAAGGTGAGGTGGCACCGGAGAGCAGGAGTACTGGGGAGACTTTCCTCTGTCTaGATGTCTCTCTCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: RGKKPKKVRWHRRAGVLGRLSSV*MSLSSG
Trigger: CCCAGAGGAGAGAGACATTCAGACAGAGGAAAGTCT...CCCCAGTACTCCTGCTCTCCGGTGCCACCTCACCTTCTTTGGCTTCTTCCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000610466.4
CDS-3UTR TCA 90 bp AACTCCAGGCCCCCAGACAGACCCTGCTGGAGAGCATTCACACCTCTGAGGTCAAGACTTTCCTCTGTCTaGATGTCTCTCTCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: NSRPPDRPCWRAFTPLRSRLSSV*MSLSSG
Trigger: CCCAGAGGAGAGAGACATTCAGACAGAGGAAAGTCT...TGACCTCAGAGGTGTGAATGCTCTCCAGCAGGGTCTGTCTGGGGGCCTGGAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR TCA 90 bp GAAGAAGCCAAAGAAGGTGAGGTGGCACCGGAGAGCAGGAGTACTGGGGTTGGGAGACTTTCCTCTGTCTaGATGTCTCTCTCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: EEAKEGEVAPESRSTGVGRLSSV*MSLSSG
Trigger: CCCAGAGGAGAGAGACATTCAGACAGAGGAAAGTCT...CCCAACCCCAGTACTCCTGCTCTCCGGTGCCACCTCACCTTCTTTGGCTTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000610466.4
CDS-3UTR TCA 90 bp GATAGTGGCAGCGGCAATGAGAGAGAGTGCAGGGGTGGGCTAGCCAGAGGGAAGTCCCATGGAATGTGTTaGTGGGTTCTGTGCTGTACT +
Preference number: 4 (lower is better)
Translates to: DSGSGNERECRGGLARGKSHGMC*WVLCCT
Trigger: AGTACAGCACAGAACCCATCAACACATTCCATGGGA...CTTCCCTCTGGCTAGCCCACCCCTGCACTCTCTCTCATTGCCGCTGCCACTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376488.8
ENST00000428668.2
ENST00000610466.4
CDS-3UTR TCA 90 bp TGGCTGCCAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGGAGCATTCACACCTCTaGGGTCAAGCCAAGGTCCGT +
Preference number: 4 (lower is better)
Translates to: WLPVGLSLCASCLSSAPLEHSHL*GQAKVR
Trigger: ACGGACCTTGGCTTGACCTCAGAGGTGTGAATGCTC...CAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTGGCAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR TCA 90 bp AGAGGGAAGAAGCCAAAGAAGGTGAGGTGGCACCGGAGAGCAGGAGTACTGGGGCGCTGTCAGCCGGAATaGCTGGAAAACATCAACACT +
Preference number: 4 (lower is better)
Translates to: RGKKPKKVRWHRRAGVLGRCQPE*LENINT
Trigger: AGTGTTGATGTTTTCCAGTCATTCCGGCTGACAGCG...CCCCAGTACTCCTGCTCTCCGGTGCCACCTCACCTTCTTTGGCTTCTTCCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428668.2
CDS-3UTR GCA 90 bp CAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCCGAGTTCAAACCAATGCTCCTaGTGCTCGACAGTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: QLVCLCVPLVYLRHPCPSSNQCS*CSTVAG
Trigger: CCCTGCCACTGTCGAGCAGCAGGAGCATTGGTTTGA...ACTCGGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR GCA 90 bp AGGGGCAGGGAGACTTTCCTCTGTCTGAATGTCTCTCTCCTCTGGGGCTGCCTGGCCTTTTCAAACCAATaGTCCTGCTGCTCGACAGTG +
Preference number: 4 (lower is better)
Translates to: RGRETFLCLNVSLLWGCLAFSNQ*SCCSTV
Trigger: CACTGTCGAGCAGCAGGAGCATTGGTTTGAAAAGGC...CAGGCAGCCCCAGAGGAGAGAGACATTCAGACAGAGGAAAGTCTCCCTGCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR GCA 90 bp CAGGGTTTCATTGTCCAAGCCGGCCTGACACCTGCCGCCCTGCCCTTGCCCAGTGCATCTCAATGTGGTTaGCATGGCAATTGTTTTTCC +
Preference number: 4 (lower is better)
Translates to: QGFIVQAGLTPAALPLPSASQCG*HGNCFS
Trigger: GGAAAAACAATTGCCATGGCAACCACATTGAGATGC...ACTGGGCAAGGGCAGGGCGGCAGGTGTCAGGCCGGCTTGGACAATGAAACCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR GCA 90 bp GATAGTGGCAGCGGCAATGAGAGAGAGTGCAGGGGTGGGCTAGCCAGAGGGAAGACGGTTGTACATCTCTaGCATGGCCTGCATCTCAAT +
Preference number: 4 (lower is better)
Translates to: DSGSGNERECRGGLARGKTVVHL*HGLHLN
Trigger: ATTGAGATGCAGGCCATGGCAGAGATGTACAACCGT...CTTCCCTCTGGCTAGCCCACCCCTGCACTCTCTCTCATTGCCGCTGCCACTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000428668.2
ENST00000610466.4
CDS-3UTR GCA 90 bp ACGGGTGCCCCATCTGCCAAGGCTGCTCCCACACTCCCTACACTCAAATCCCGGTTCTTCATCAGAGACTaGTCTGCAAACCCTGGTTTG +
Preference number: 4 (lower is better)
Translates to: TGAPSAKAAPTLPTLKSRFFIRD*SANPGL
Trigger: CAAACCAGGGTTTGCAGAGCAGTCTCTGATGAAGAA...CCGGGATTTGAGTGTAGGGAGTGTGGGAGCAGCCTTGGCAGATGGGGCACCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR GCA 90 bp TGGCTGCCAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGTATCTTCGGCACCCTTaGCCGAGTCCCCTGTGGAAT +
Preference number: 4 (lower is better)
Translates to: WLPVGLSLCASCLSSAPLYLRHP*PSPLWN
Trigger: ATTCCACAGGGGACTCGGGCAAGGGTGCCGAAGATA...CAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTGGCAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000610466.4
CDS-3UTR GCA 90 bp TCTGAGGTCAAGCCAAGGTCCGTGCCATTGCATCCTCTGCCCAGAGGCCCGCCCCCTTCACAGAGCCAGTaGTGTCGTCTATATCATTTT +
Preference number: 4 (lower is better)
Translates to: SEVKPRSVPLHPLPRGPPPSQSQ*CRLYHF
Trigger: AAAATGATATAGACGACAGCACTGGCTCTGTGAAGG...GGGCGGGCCTCTGGGCAGAGGATGCAATGGCACGGACCTTGGCTTGACCTCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR GCA 90 bp CTGCCAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCCAGCAACCCATATCTTTaGACCCTCCTCCATGCCCCA +
Preference number: 4 (lower is better)
Translates to: LPVGLSLCASCLSSAPLPSNPYL*TLLHAP
Trigger: TGGGGCATGGAGGAGGGTGCAAAGATATGGGTTGCT...GGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR GCA 90 bp GATAGTGGCAGCGGCAATGAGAGAGAGTGCAGGGGTGGGCTAGCCAGAGGGAAGGTCCAGCAAGTTTATTaGTACGCTTGTTCCGGCCTT +
Preference number: 4 (lower is better)
Translates to: DSGSGNERECRGGLARGKVQQVY*YACSGL
Trigger: AAGGCCGGAACAAGCGTAGCAATAAACTTGCTGGAC...CTTCCCTCTGGCTAGCCCACCCCTGCACTCTCTCTCATTGCCGCTGCCACTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610466.4
CDS-3UTR CCA 90 bp GAAGAAGCCAAAGAAGGTGAGGTGGCACCGGAGAGCAGGAGTACTGGGGTTGGGACCTCATGCATGTCCTaGTCTCCATACACCTGGTCA +
Preference number: 4 (lower is better)
Translates to: EEAKEGEVAPESRSTGVGTSCMS*SPYTWS
Trigger: TGACCAGGTGTATGGAGACCAGGACATGCATGAGGT...CCCAACCCCAGTACTCCTGCTCTCCGGTGCCACCTCACCTTCTTTGGCTTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000428668.2
ENST00000610466.4
CDS-3UTR CCA 90 bp AGAGGGAAGAAGCCAAAGAAGGTGAGGTGGCACCGGAGAGCAGGAGTACTGGGGAGGGCGAAGGAGGTTTaGCAAGAGCTAAAACAGTGC +
Preference number: 4 (lower is better)
Translates to: RGKKPKKVRWHRRAGVLGRAKEV*QELKQC
Trigger: GCACTGTTTTAGCTCTTGCCAAACCTCCTTCGCCCT...CCCCAGTACTCCTGCTCTCCGGTGCCACCTCACCTTCTTTGGCTTCTTCCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000428668.2
ENST00000610466.4
CDS-3UTR CCA 90 bp CAGCAAATCAAATACAAACTCCAGGCCCCCAGACAGACCCTGCTGGAGAGCATTCTGACTGCTTGTACCTaGCGCACAGGGCGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: QQIKYKLQAPRQTLLESILTACT*RTGRRR
Trigger: CCTCCTTCGCCCTGTGCGCCAGGTACAAGCAGTCAG...AATGCTCTCCAGCAGGGTCTGTCTGGGGGCCTGGAGTTTGTATTTGATTTGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR CCA 90 bp AGGGGCAGGGAGACTTTCCTCTGTCTGAATGTCTCTCTCCTCTGGGGCTGCCTGTCTAGGTATTCCTGTTaGGACACTGCCAGCACCGAA +
Preference number: 4 (lower is better)
Translates to: RGRETFLCLNVSLLWGCLSRYSC*DTASTE
Trigger: TTCGGTGCTGGCAGTGTCCCAACAGGAATACCTAGA...CAGGCAGCCCCAGAGGAGAGAGACATTCAGACAGAGGAAAGTCTCCCTGCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR CCA 90 bp AGAGGGAAGAAGCCAAAGAAGGTGAGGTGGCACCGGAGAGCAGGAGTACTGGGGTCTAGGTATTCCTGTTaGGACACTGCCAGCACCGAA +
Preference number: 4 (lower is better)
Translates to: RGKKPKKVRWHRRAGVLGSRYSC*DTASTE
Trigger: TTCGGTGCTGGCAGTGTCCCAACAGGAATACCTAGA...CCCCAGTACTCCTGCTCTCCGGTGCCACCTCACCTTCTTTGGCTTCTTCCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000428668.2
ENST00000610466.4
CDS-3UTR CCA 90 bp CAGCAAATCAAATACAAACTCCAGGCCCCCAGACAGACCCTGCTGGAGAGCATTGAGAGAGTGCAGGGGTaGGCTAGCCAGAGGGAAGTG +
Preference number: 4 (lower is better)
Translates to: QQIKYKLQAPRQTLLESIERVQG*ASQREV
Trigger: CACTTCCCTCTGGCTAGCCCACCCCTGCACTCTCTC...AATGCTCTCCAGCAGGGTCTGTCTGGGGGCCTGGAGTTTGTATTTGATTTGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376488.8
CDS-3UTR CCA 90 bp CAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCCGAGTTGTGGAATGCAGGGATaGTTCTGTGCGGGATGGGGT +
Preference number: 4 (lower is better)
Translates to: QLVCLCVPLVYLRHPCPSCGMQG*FCAGWG
Trigger: ACCCCATCCCGCACAGAACCATCCCTGCATTCCACA...ACTCGGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000610466.4
CDS-3UTR CCA 90 bp GAAGAAGCCAAAGAAGGTGAGGTGGCACCGGAGAGCAGGAGTACTGGGGTTGGGCGTTCTTGGGGGTACTaGGAAGGGAAATTTCCCACT +
Preference number: 4 (lower is better)
Translates to: EEAKEGEVAPESRSTGVGRSWGY*EGKFPT
Trigger: AGTGGGAAATTTCCCTTCCCAGTACCCCCAAGAACG...CCCAACCCCAGTACTCCTGCTCTCCGGTGCCACCTCACCTTCTTTGGCTTCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000610466.4
CDS-3UTR CCA 90 bp CTGCCAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCCAGGCTCAGACGTTCTTaGGGGTACTGGGAAGGGAAA +
Preference number: 4 (lower is better)
Translates to: LPVGLSLCASCLSSAPLPRLRRS*GYWEGK
Trigger: TTTCCCTTCCCAGTACCCCCAAGAACGTCTGAGCCT...GGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR CCA 90 bp TGCCAAGGCTGCTCCCACACTCCCTACACTCAAATCCCGGGTGGCAGCCATAATAGGCTCAGACGTTCTTaGGGGTACTGGGAAGGGAAA +
Preference number: 4 (lower is better)
Translates to: CQGCSHTPYTQIPGGSHNRLRRS*GYWEGK
Trigger: TTTCCCTTCCCAGTACCCCCAAGAACGTCTGAGCCT...ATTATGGCTGCCACCCGGGATTTGAGTGTAGGGAGTGTGGGAGCAGCCTTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR CCA 90 bp ATGAGGGGCAGGGAGACTTTCCTCTGTCTGAATGTCTCTCTCCTCTGGGGCTGCAGGCTCAGACGTTCTTaGGGGTACTGGGAAGGGAAA +
Preference number: 4 (lower is better)
Translates to: MRGRETFLCLNVSLLWGCRLRRS*GYWEGK
Trigger: TTTCCCTTCCCAGTACCCCCAAGAACGTCTGAGCCT...GCAGCCCCAGAGGAGAGAGACATTCAGACAGAGGAAAGTCTCCCTGCCCCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR CCA 90 bp ACGGGTGCCCCATCTGCCAAGGCTGCTCCCACACTCCCTACACTCAAATCCCGGCAAGGACATTACAGATaGCGGATCTTGTCAACACCT +
Preference number: 4 (lower is better)
Translates to: TGAPSAKAAPTLPTLKSRQGHYR*RILSTP
Trigger: AGGTGTTGACAAGATCCGCCATCTGTAATGTCCTTG...CCGGGATTTGAGTGTAGGGAGTGTGGGAGCAGCCTTGGCAGATGGGGCACCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR CCA 90 bp GAAGAAGCCAAAGAAGGTGAGGTGGCACCGGAGAGCAGGAGTACTGGGGTTGGGGTCAGCCGGAATGACTaGAAAACATCAACACTCCCG +
Preference number: 4 (lower is better)
Translates to: EEAKEGEVAPESRSTGVGVSRND*KTSTLP
Trigger: CGGGAGTGTTGATGTTTTCCAGTCATTCCGGCTGAC...CCCAACCCCAGTACTCCTGCTCTCCGGTGCCACCTCACCTTCTTTGGCTTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000428668.2
CDS-3UTR TCA 90 bp GAACAGAGTCGCTCAGGGAAACTGACATTTGGTTTTATTGTGCCAAGGACATTACCTGGTAGCGGGCCTTaGGGCGGTGGCGAAGCTCGC +
Preference number: 4 (lower is better)
Translates to: EQSRSGKLTFGFIVPRTLPGSGP*GGGEAR
Trigger: GCGAGCTTCGCCACCGCCTCAAGGCCCGCTACCAGG...TAATGTCCTTGGCACAATAAAACCAAATGTCAGTTTCCCTGAGCGACTCTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR TCA 90 bp GAAGAAGCCAAAGAAGGTGAGGTGGCACCGGAGAGCAGGAGTACTGGGGTTGGGGGTTCGTCCTCGTTTTaGTGTATCCCATGGAATGTG +
Preference number: 4 (lower is better)
Translates to: EEAKEGEVAPESRSTGVGGSSSF*CIPWNV
Trigger: CACATTCCATGGGATACATCAAAACGAGGACGAACC...CCCAACCCCAGTACTCCTGCTCTCCGGTGCCACCTCACCTTCTTTGGCTTCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000428668.2
ENST00000610466.4
CDS-3UTR TCA 90 bp AGGGGCAGGGAGACTTTCCTCTGTCTGAATGTCTCTCTCCTCTGGGGCTGCCTGGGTTCGTCCTCGTTTTaGTGTATCCCATGGAATGTG +
Preference number: 4 (lower is better)
Translates to: RGRETFLCLNVSLLWGCLGSSSF*CIPWNV
Trigger: CACATTCCATGGGATACATCAAAACGAGGACGAACC...CAGGCAGCCCCAGAGGAGAGAGACATTCAGACAGAGGAAAGTCTCCCTGCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR TCA 90 bp AGCAAATCAAATACAAACTCCAGGCCCCCAGACAGACCCTGCTGGAGAGCATTCCTGCAAACCCTGGTTTaGATGATGGCAGGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: SKSNTNSRPPDRPCWRAFLQTLV*MMAGPA
Trigger: GGCTGGGCCTGCCATCATTCAAACCAGGGTTTGCAG...GAATGCTCTCCAGCAGGGTCTGTCTGGGGGCCTGGAGTTTGTATTTGATTTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR GCA 90 bp TGCCAAGGCTGCTCCCACACTCCCTACACTCAAATCCCGGGTGGCAGCCATAATGCCTTTTCAAACCAATaGTCCTGCTGCTCGACAGTG +
Preference number: 4 (lower is better)
Translates to: CQGCSHTPYTQIPGGSHNAFSNQ*SCCSTV
Trigger: CACTGTCGAGCAGCAGGAGCATTGGTTTGAAAAGGC...ATTATGGCTGCCACCCGGGATTTGAGTGTAGGGAGTGTGGGAGCAGCCTTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR GCA 90 bp CTGCCAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCCGCCTTTTCAAACCAATaGTCCTGCTGCTCGACAGTG +
Preference number: 4 (lower is better)
Translates to: LPVGLSLCASCLSSAPLPAFSNQ*SCCSTV
Trigger: CACTGTCGAGCAGCAGGAGCATTGGTTTGAAAAGGC...GGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR GCA 90 bp GTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCCGAGTCCCTGGTTTCGCACAACCTCATaGATGTCCTGGTCTCCATAC +
Preference number: 4 (lower is better)
Translates to: VCLCVPLVYLRHPCPSPWFRTTS*MSWSPY
Trigger: GTATGGAGACCAGGACATGCATGAGGTTGTGCGAAA...CCAGGGACTCGGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396743.7
ENST00000455452.5
CDS-3UTR GCA 90 bp AGAGGGAAGAAGCCAAAGAAGGTGAGGTGGCACCGGAGAGCAGGAGTACTGGGGTTTCGCACAACCTCATaGATGTCCTGGTCTCCATAC +
Preference number: 4 (lower is better)
Translates to: RGKKPKKVRWHRRAGVLGFRTTS*MSWSPY
Trigger: GTATGGAGACCAGGACATGCATGAGGTTGTGCGAAA...CCCCAGTACTCCTGCTCTCCGGTGCCACCTCACCTTCTTTGGCTTCTTCCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000428668.2
ENST00000610466.4
CDS-3UTR GCA 90 bp CCATCTGCCAAGGCTGCTCCCACACTCCCTACACTCAAATCCCGGGTGGCAGCCGCATCTCAATGTGGTTaGCATGGCAATTGTTTTTCC +
Preference number: 4 (lower is better)
Translates to: PSAKAAPTLPTLKSRVAAASQCG*HGNCFS
Trigger: GGAAAAACAATTGCCATGGCAACCACATTGAGATGC...GGCTGCCACCCGGGATTTGAGTGTAGGGAGTGTGGGAGCAGCCTTGGCAGATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR GCA 90 bp TGCCAAGGCTGCTCCCACACTCCCTACACTCAAATCCCGGGTGGCAGCCATAATATCTCTGCCATGGCCTaGATCTCAATGTGGTTGCCA +
Preference number: 4 (lower is better)
Translates to: CQGCSHTPYTQIPGGSHNISAMA*ISMWLP
Trigger: TGGCAACCACATTGAGATGCAGGCCATGGCAGAGAT...ATTATGGCTGCCACCCGGGATTTGAGTGTAGGGAGTGTGGGAGCAGCCTTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR GCA 90 bp ACCCTGCTGGAGAGCATTCACACCTCTGAGGTCAAGCCAAGGTCCGTGCCATTGATCTCTGCCATGGCCTaGATCTCAATGTGGTTGCCA +
Preference number: 4 (lower is better)
Translates to: TLLESIHTSEVKPRSVPLISAMA*ISMWLP
Trigger: TGGCAACCACATTGAGATGCAGGCCATGGCAGAGAT...CAATGGCACGGACCTTGGCTTGACCTCAGAGGTGTGAATGCTCTCCAGCAGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR GCA 90 bp TGTCTATCTTCGGCACCCTTGCCCGAGTCCCTGGGGTTGGGAGATGGTGTCCAAACGGTTGTACATCTCTaGCATGGCCTGCATCTCAAT +
Preference number: 4 (lower is better)
Translates to: CLSSAPLPESLGLGDGVQTVVHL*HGLHLN
Trigger: ATTGAGATGCAGGCCATGGCAGAGATGTACAACCGT...TTGGACACCATCTCCCAACCCCAGGGACTCGGGCAAGGGTGCCGAAGATAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396743.7
ENST00000455452.5
CDS-3UTR GCA 90 bp GAAGAAGCCAAAGAAGGTGAGGTGGCACCGGAGAGCAGGAGTACTGGGGTTGGGACGGTTGTACATCTCTaGCATGGCCTGCATCTCAAT +
Preference number: 4 (lower is better)
Translates to: EEAKEGEVAPESRSTGVGTVVHL*HGLHLN
Trigger: ATTGAGATGCAGGCCATGGCAGAGATGTACAACCGT...CCCAACCCCAGTACTCCTGCTCTCCGGTGCCACCTCACCTTCTTTGGCTTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000428668.2
ENST00000610466.4
CDS-3UTR GCA 90 bp CTGCCAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCCCTGCAGAAGTACCTGTaGTGTACTGGTACACCTCCA +
Preference number: 4 (lower is better)
Translates to: LPVGLSLCASCLSSAPLPLQKYL*CTGTPP
Trigger: TGGAGGTGTACCAGTACAGCACAGGTACTTCTGCAG...GGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156084.8
ENST00000455452.5
CDS-3UTR GCA 90 bp ATGAGGGGCAGGGAGACTTTCCTCTGTCTGAATGTCTCTCTCCTCTGGGGCTGCCTGCAGAAGTACCTGTaGTGTACTGGTACACCTCCA +
Preference number: 4 (lower is better)
Translates to: MRGRETFLCLNVSLLWGCLQKYL*CTGTPP
Trigger: TGGAGGTGTACCAGTACAGCACAGGTACTTCTGCAG...GCAGCCCCAGAGGAGAGAGACATTCAGACAGAGGAAAGTCTCCCTGCCCCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000156084.8
ENST00000455452.5
CDS-3UTR GCA 90 bp ACACCTCTGAGGTCAAGCCAAGGTCCGTGCCATTGCATCCTCTGCCCAGAGGCCTTCTTCATCAGAGACTaGTCTGCAAACCCTGGTTTG +
Preference number: 4 (lower is better)
Translates to: TPLRSSQGPCHCILCPEAFFIRD*SANPGL
Trigger: CAAACCAGGGTTTGCAGAGCAGTCTCTGATGAAGAA...GGCCTCTGGGCAGAGGATGCAATGGCACGGACCTTGGCTTGACCTCAGAGGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR GCA 90 bp GATAGTGGCAGCGGCAATGAGAGAGAGTGCAGGGGTGGGCTAGCCAGAGGGAAGTTCTTCATCAGAGACTaGTCTGCAAACCCTGGTTTG +
Preference number: 4 (lower is better)
Translates to: DSGSGNERECRGGLARGKFFIRD*SANPGL
Trigger: CAAACCAGGGTTTGCAGAGCAGTCTCTGATGAAGAA...CTTCCCTCTGGCTAGCCCACCCCTGCACTCTCTCTCATTGCCGCTGCCACTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000428668.2
ENST00000610466.4
CDS-3UTR GCA 90 bp CCATCTGCCAAGGCTGCTCCCACACTCCCTACACTCAAATCCCGGGTGGCAGCCTTGTCTTCTAGCATCTaGTGTTCAATCCATGACTCC +
Preference number: 4 (lower is better)
Translates to: PSAKAAPTLPTLKSRVAALSSSI*CSIHDS
Trigger: GGAGTCATGGATTGAACAGCAGATGCTAGAAGACAA...GGCTGCCACCCGGGATTTGAGTGTAGGGAGTGTGGGAGCAGCCTTGGCAGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR GCA 90 bp CAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCCGAGTATGCCCAATTCAGCATaGAGCTCAGGGTGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: QLVCLCVPLVYLRHPCPSMPNSA*SSGCSG
Trigger: ACCTGAGCACCCTGAGCTGCATGCTGAATTGGGCAT...ACTCGGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR GCA 90 bp AGAGGGAAGAAGCCAAAGAAGGTGAGGTGGCACCGGAGAGCAGGAGTACTGGGGGGGGGCGGGTCTCTGTaGACTTTGTTTTTCTTCATA +
Preference number: 4 (lower is better)
Translates to: RGKKPKKVRWHRRAGVLGGGGSL*TLFFFI
Trigger: TATGAAGAAAAACAAAGTGCACAGAGACCCGCCCCC...CCCCAGTACTCCTGCTCTCCGGTGCCACCTCACCTTCTTTGGCTTCTTCCCTCT
54% GC, longest homopolymer 9 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000428668.2
ENST00000610466.4
CDS-3UTR GCA 90 bp GTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCCGAGTCCCTGGGGGGGCGGGTCTCTGTaGACTTTGTTTTTCTTCATA +
Preference number: 4 (lower is better)
Translates to: VCLCVPLVYLRHPCPSPWGGGSL*TLFFFI
Trigger: TATGAAGAAAAACAAAGTGCACAGAGACCCGCCCCC...CCAGGGACTCGGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGAC
54% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396743.7
ENST00000455452.5
CDS-3UTR GCA 90 bp ACGGGTGCCCCATCTGCCAAGGCTGCTCCCACACTCCCTACACTCAAATCCCGGCCTTCACAGAGCCAGTaGTGTCGTCTATATCATTTT +
Preference number: 4 (lower is better)
Translates to: TGAPSAKAAPTLPTLKSRPSQSQ*CRLYHF
Trigger: AAAATGATATAGACGACAGCACTGGCTCTGTGAAGG...CCGGGATTTGAGTGTAGGGAGTGTGGGAGCAGCCTTGGCAGATGGGGCACCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR GCA 90 bp GGTCAGGGTTTCATTGTCCAAGCCGGCCTGACACCTGCCGCCCTGCCCTTGCCCCATTTGGTTTTATTGTaGCAAGGACATTACAGATGG +
Preference number: 4 (lower is better)
Translates to: GQGFIVQAGLTPAALPLPHLVLL*QGHYRW
Trigger: CCATCTGTAATGTCCTTGGCACAATAAAACCAAATG...GGGCAAGGGCAGGGCGGCAGGTGTCAGGCCGGCTTGGACAATGAAACCCTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR CCA 90 bp CTGCCAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCCACCTCATGCATGTCCTaGTCTCCATACACCTGGTCA +
Preference number: 4 (lower is better)
Translates to: LPVGLSLCASCLSSAPLPTSCMS*SPYTWS
Trigger: TGACCAGGTGTATGGAGACCAGGACATGCATGAGGT...GGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR CCA 90 bp TGCCAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCCGACCTCATGCATGTCCTaGTCTCCATACACCTGGTCA +
Preference number: 4 (lower is better)
Translates to: CQLVCLCVPLVYLRHPCPTSCMS*SPYTWS
Trigger: TGACCAGGTGTATGGAGACCAGGACATGCATGAGGT...CGGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR CCA 90 bp TGTCTATCTTCGGCACCCTTGCCCGAGTCCCTGGGGTTGGGAGATGGTGTCCAATGTACATCTCTGCCATaGCCTGCATCTCAATGTGGT +
Preference number: 4 (lower is better)
Translates to: CLSSAPLPESLGLGDGVQCTSLP*PASQCG
Trigger: ACCACATTGAGATGCAGGCCATGGCAGAGATGTACA...TTGGACACCATCTCCCAACCCCAGGGACTCGGGCAAGGGTGCCGAAGATAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396743.7
ENST00000455452.5
CDS-3UTR CCA 90 bp AGAGGGAAGAAGCCAAAGAAGGTGAGGTGGCACCGGAGAGCAGGAGTACTGGGGTGTACATCTCTGCCATaGCCTGCATCTCAATGTGGT +
Preference number: 4 (lower is better)
Translates to: RGKKPKKVRWHRRAGVLGCTSLP*PASQCG
Trigger: ACCACATTGAGATGCAGGCCATGGCAGAGATGTACA...CCCCAGTACTCCTGCTCTCCGGTGCCACCTCACCTTCTTTGGCTTCTTCCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000428668.2
ENST00000610466.4
CDS-3UTR CCA 90 bp GTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCCGAGTCCCTGGTGTACATCTCTGCCATaGCCTGCATCTCAATGTGGT +
Preference number: 4 (lower is better)
Translates to: VCLCVPLVYLRHPCPSPWCTSLP*PASQCG
Trigger: ACCACATTGAGATGCAGGCCATGGCAGAGATGTACA...CCAGGGACTCGGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396743.7
ENST00000455452.5
CDS-3UTR CCA 90 bp TGCCAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCCGAGGGCGAAGGAGGTTTaGCAAGAGCTAAAACAGTGC +
Preference number: 4 (lower is better)
Translates to: CQLVCLCVPLVYLRHPCPRAKEV*QELKQC
Trigger: GCACTGTTTTAGCTCTTGCCAAACCTCCTTCGCCCT...CGGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR CCA 90 bp TGCCAAGGCTGCTCCCACACTCCCTACACTCAAATCCCGGGTGGCAGCCATAATTCTAGGTATTCCTGTTaGGACACTGCCAGCACCGAA +
Preference number: 4 (lower is better)
Translates to: CQGCSHTPYTQIPGGSHNSRYSC*DTASTE
Trigger: TTCGGTGCTGGCAGTGTCCCAACAGGAATACCTAGA...ATTATGGCTGCCACCCGGGATTTGAGTGTAGGGAGTGTGGGAGCAGCCTTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR CCA 90 bp TGCCAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCCGTCTAGGTATTCCTGTTaGGACACTGCCAGCACCGAA +
Preference number: 4 (lower is better)
Translates to: CQLVCLCVPLVYLRHPCPSRYSC*DTASTE
Trigger: TTCGGTGCTGGCAGTGTCCCAACAGGAATACCTAGA...CGGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR CCA 90 bp CTGCCAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCCCGTTCTTGGGGGTACTaGGAAGGGAAATTTCCCACT +
Preference number: 4 (lower is better)
Translates to: LPVGLSLCASCLSSAPLPRSWGY*EGKFPT
Trigger: AGTGGGAAATTTCCCTTCCCAGTACCCCCAAGAACG...GGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTGGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR CCA 90 bp ATCAAATACAAACTCCAGGCCCCCAGACAGACCCTGCTGGAGAGCATTCACACCGGTTCTGTGCTGTACTaGTACACCTCCACAGGACGG +
Preference number: 4 (lower is better)
Translates to: IKYKLQAPRQTLLESIHTGSVLY*YTSTGR
Trigger: CCGTCCTGTGGAGGTGTACCAGTACAGCACAGAACC...GGTGTGAATGCTCTCCAGCAGGGTCTGTCTGGGGGCCTGGAGTTTGTATTTGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR TCA 90 bp CCATCTGCCAAGGCTGCTCCCACACTCCCTACACTCAAATCCCGGGTGGCAGCCGTTAGGATTCACCACTaGATTATAGTGGATATTCCG +
Preference number: 4 (lower is better)
Translates to: PSAKAAPTLPTLKSRVAAVRIHH*IIVDIP
Trigger: CGGAATATCCACTATAATTCAGTGGTGAATCCTAAC...GGCTGCCACCCGGGATTTGAGTGTAGGGAGTGTGGGAGCAGCCTTGGCAGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR TCA 90 bp ACCCTGCTGGAGAGCATTCACACCTCTGAGGTCAAGCCAAGGTCCGTGCCATTGTCCCATGGAATGTGTTaGTGGGTTCTGTGCTGTACT +
Preference number: 4 (lower is better)
Translates to: TLLESIHTSEVKPRSVPLSHGMC*WVLCCT
Trigger: AGTACAGCACAGAACCCATCAACACATTCCATGGGA...CAATGGCACGGACCTTGGCTTGACCTCAGAGGTGTGAATGCTCTCCAGCAGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR TCA 90 bp TGCCAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCCGTCCCATGGAATGTGTTaGTGGGTTCTGTGCTGTACT +
Preference number: 4 (lower is better)
Translates to: CQLVCLCVPLVYLRHPCPSHGMC*WVLCCT
Trigger: AGTACAGCACAGAACCCATCAACACATTCCATGGGA...CGGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376488.8
ENST00000396743.7
ENST00000610466.4
CDS-3UTR TCA 90 bp AGGGGCAGGGAGACTTTCCTCTGTCTGAATGTCTCTCTCCTCTGGGGCTGCCTGGTCGCTCAGGGAAACTaGCATTTGGTTTTATTGTGC +
Preference number: 4 (lower is better)
Translates to: RGRETFLCLNVSLLWGCLVAQGN*HLVLLC
Trigger: GCACAATAAAACCAAATGTCAGTTTCCCTGAGCGAC...CAGGCAGCCCCAGAGGAGAGAGACATTCAGACAGAGGAAAGTCTCCCTGCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR GCA 90 bp TGGCTGCCAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGGCCTTTTCAAACCAATaGTCCTGCTGCTCGACAGTG +
Preference number: 4 (lower is better)
Translates to: WLPVGLSLCASCLSSAPLAFSNQ*SCCSTV
Trigger: CACTGTCGAGCAGCAGGAGCATTGGTTTGAAAAGGC...CAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTGGCAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR GCA 90 bp CTGCCAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCCTTTCGCACAACCTCATaGATGTCCTGGTCTCCATAC +
Preference number: 4 (lower is better)
Translates to: LPVGLSLCASCLSSAPLPFRTTS*MSWSPY
Trigger: GTATGGAGACCAGGACATGCATGAGGTTGTGCGAAA...GGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR GCA 90 bp GATAGTGGCAGCGGCAATGAGAGAGAGTGCAGGGGTGGGCTAGCCAGAGGGAAGTCATCAGATAGTCCATaGAATGCTTTCGCACAACCT +
Preference number: 4 (lower is better)
Translates to: DSGSGNERECRGGLARGKSSDSP*NAFAQP
Trigger: AGGTTGTGCGAAAGCATTGCATGGACTATCTGATGA...CTTCCCTCTGGCTAGCCCACCCCTGCACTCTCTCTCATTGCCGCTGCCACTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000428668.2
ENST00000610466.4
CDS-3UTR GCA 90 bp CAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCCGAGTATCTCTGCCATGGCCTaGATCTCAATGTGGTTGCCA +
Preference number: 4 (lower is better)
Translates to: QLVCLCVPLVYLRHPCPSISAMA*ISMWLP
Trigger: TGGCAACCACATTGAGATGCAGGCCATGGCAGAGAT...ACTCGGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR GCA 90 bp TGCCAAGGCTGCTCCCACACTCCCTACACTCAAATCCCGGGTGGCAGCCATAATGTTGATGGGTTCCACTaGAGAAGTACCTGTGCTGTA +
Preference number: 4 (lower is better)
Translates to: CQGCSHTPYTQIPGGSHNVDGFH*RSTCAV
Trigger: TACAGCACAGGTACTTCTGCAGTGGAACCCATCAAC...ATTATGGCTGCCACCCGGGATTTGAGTGTAGGGAGTGTGGGAGCAGCCTTGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156084.8
ENST00000455452.5
CDS-3UTR GCA 90 bp CTGCCAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCCGTTGATGGGTTCCACTaGAGAAGTACCTGTGCTGTA +
Preference number: 4 (lower is better)
Translates to: LPVGLSLCASCLSSAPLPVDGFH*RSTCAV
Trigger: TACAGCACAGGTACTTCTGCAGTGGAACCCATCAAC...GGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156084.8
ENST00000455452.5
CDS-3UTR GCA 90 bp AGGGGCAGGGAGACTTTCCTCTGTCTGAATGTCTCTCTCCTCTGGGGCTGCCTGTTCTTCATCAGAGACTaGTCTGCAAACCCTGGTTTG +
Preference number: 4 (lower is better)
Translates to: RGRETFLCLNVSLLWGCLFFIRD*SANPGL
Trigger: CAAACCAGGGTTTGCAGAGCAGTCTCTGATGAAGAA...CAGGCAGCCCCAGAGGAGAGAGACATTCAGACAGAGGAAAGTCTCCCTGCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR GCA 90 bp TGCCTCTTGTCTATCTTCGGCACCCTTGCCCGAGTCCCTGGGGTTGGGAGATGGTTGTCTTCTAGCATCTaGTGTTCAATCCATGACTCC +
Preference number: 4 (lower is better)
Translates to: CLLSIFGTLARVPGVGRWLSSSI*CSIHDS
Trigger: GGAGTCATGGATTGAACAGCAGATGCTAGAAGACAA...CCATCTCCCAACCCCAGGGACTCGGGCAAGGGTGCCGAAGATAGACAAGAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396743.7
ENST00000455452.5
CDS-3UTR GCA 90 bp ATCAAATACAAACTCCAGGCCCCCAGACAGACCCTGCTGGAGAGCATTCACACCATGCCCAATTCAGCATaGAGCTCAGGGTGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: IKYKLQAPRQTLLESIHTMPNSA*SSGCSG
Trigger: ACCTGAGCACCCTGAGCTGCATGCTGAATTGGGCAT...GGTGTGAATGCTCTCCAGCAGGGTCTGTCTGGGGGCCTGGAGTTTGTATTTGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR GCA 90 bp TTTAATAAGCAGCAAATCAAATACAAACTCCAGGCCCCCAGACAGACCCTGCTGTGCCCGGTCGGCCCCTaGCGAGAACTGACTGCTTGT +
Preference number: 4 (lower is better)
Translates to: FNKQQIKYKLQAPRQTLLCPVGP*RELTAC
Trigger: ACAAGCAGTCAGTTCTCGGCAGGGGCCGACCGGGCA...CAGCAGGGTCTGTCTGGGGGCCTGGAGTTTGTATTTGATTTGCTGCTTATTAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR GCA 90 bp ACCCTGCTGGAGAGCATTCACACCTCTGAGGTCAAGCCAAGGTCCGTGCCATTGGGGGGCGGGTCTCTGTaGACTTTGTTTTTCTTCATA +
Preference number: 4 (lower is better)
Translates to: TLLESIHTSEVKPRSVPLGGGSL*TLFFFI
Trigger: TATGAAGAAAAACAAAGTGCACAGAGACCCGCCCCC...CAATGGCACGGACCTTGGCTTGACCTCAGAGGTGTGAATGCTCTCCAGCAGGGT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR GCA 90 bp ATCAAATACAAACTCCAGGCCCCCAGACAGACCCTGCTGGAGAGCATTCACACCAGCAACCCATATCTTTaGACCCTCCTCCATGCCCCA +
Preference number: 4 (lower is better)
Translates to: IKYKLQAPRQTLLESIHTSNPYL*TLLHAP
Trigger: TGGGGCATGGAGGAGGGTGCAAAGATATGGGTTGCT...GGTGTGAATGCTCTCCAGCAGGGTCTGTCTGGGGGCCTGGAGTTTGTATTTGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR CCA 90 bp CTGCCAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCCTGTACATCTCTGCCATaGCCTGCATCTCAATGTGGT +
Preference number: 4 (lower is better)
Translates to: LPVGLSLCASCLSSAPLPCTSLP*PASQCG
Trigger: ACCACATTGAGATGCAGGCCATGGCAGAGATGTACA...GGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR CCA 90 bp CAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCCGAGTAGGGCGAAGGAGGTTTaGCAAGAGCTAAAACAGTGC +
Preference number: 4 (lower is better)
Translates to: QLVCLCVPLVYLRHPCPSRAKEV*QELKQC
Trigger: GCACTGTTTTAGCTCTTGCCAAACCTCCTTCGCCCT...ACTCGGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR CCA 90 bp GTCTATCTTCGGCACCCTTGCCCGAGTCCCTGGGGTTGGGAGATGGTGTCCAATCAAGGACATTACAGATaGCGGATCTTGTCAACACCT +
Preference number: 4 (lower is better)
Translates to: VYLRHPCPSPWGWEMVSNQGHYR*RILSTP
Trigger: AGGTGTTGACAAGATCCGCCATCTGTAATGTCCTTG...ATTGGACACCATCTCCCAACCCCAGGGACTCGGGCAAGGGTGCCGAAGATAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396743.7
ENST00000455452.5
CDS-3UTR TCA 90 bp TGGCTGCCAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGGGTTCGTCCTCGTTTTaGTGTATCCCATGGAATGTG +
Preference number: 4 (lower is better)
Translates to: WLPVGLSLCASCLSSAPLGSSSF*CIPWNV
Trigger: CACATTCCATGGGATACATCAAAACGAGGACGAACC...CAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTGGCAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR TCA 90 bp GATAGTGGCAGCGGCAATGAGAGAGAGTGCAGGGGTGGGCTAGCCAGAGGGAAGGTTAGGATTCACCACTaGATTATAGTGGATATTCCG +
Preference number: 4 (lower is better)
Translates to: DSGSGNERECRGGLARGKVRIHH*IIVDIP
Trigger: CGGAATATCCACTATAATTCAGTGGTGAATCCTAAC...CTTCCCTCTGGCTAGCCCACCCCTGCACTCTCTCTCATTGCCGCTGCCACTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000428668.2
ENST00000610466.4
CDS-3UTR TCA 90 bp AGAGGGAAGAAGCCAAAGAAGGTGAGGTGGCACCGGAGAGCAGGAGTACTGGGGCTGCTGTTCAATCCATaGCTCCTCCGATGTTTTTAT +
Preference number: 4 (lower is better)
Translates to: RGKKPKKVRWHRRAGVLGLLFNP*LLRCFY
Trigger: ATAAAAACATCGGAGGAGTCATGGATTGAACAGCAG...CCCCAGTACTCCTGCTCTCCGGTGCCACCTCACCTTCTTTGGCTTCTTCCCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000428668.2
ENST00000610466.4
CDS-3UTR TCA 90 bp GAAGAAGCCAAAGAAGGTGAGGTGGCACCGGAGAGCAGGAGTACTGGGGTTGGGCTGCTGTTCAATCCATaGCTCCTCCGATGTTTTTAT +
Preference number: 4 (lower is better)
Translates to: EEAKEGEVAPESRSTGVGLLFNP*LLRCFY
Trigger: ATAAAAACATCGGAGGAGTCATGGATTGAACAGCAG...CCCAACCCCAGTACTCCTGCTCTCCGGTGCCACCTCACCTTCTTTGGCTTCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000428668.2
ENST00000610466.4
CDS-3UTR GCA 90 bp CAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCCGAGTTTTCGCACAACCTCATaGATGTCCTGGTCTCCATAC +
Preference number: 4 (lower is better)
Translates to: QLVCLCVPLVYLRHPCPSFRTTS*MSWSPY
Trigger: GTATGGAGACCAGGACATGCATGAGGTTGTGCGAAA...ACTCGGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR GCA 90 bp AGAGGGAAGAAGCCAAAGAAGGTGAGGTGGCACCGGAGAGCAGGAGTACTGGGGGCATCTCAATGTGGTTaGCATGGCAATTGTTTTTCC +
Preference number: 4 (lower is better)
Translates to: RGKKPKKVRWHRRAGVLGASQCG*HGNCFS
Trigger: GGAAAAACAATTGCCATGGCAACCACATTGAGATGC...CCCCAGTACTCCTGCTCTCCGGTGCCACCTCACCTTCTTTGGCTTCTTCCCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000428668.2
ENST00000610466.4
CDS-3UTR GCA 90 bp GAAGAAGCCAAAGAAGGTGAGGTGGCACCGGAGAGCAGGAGTACTGGGGTTGGGGCATCTCAATGTGGTTaGCATGGCAATTGTTTTTCC +
Preference number: 4 (lower is better)
Translates to: EEAKEGEVAPESRSTGVGASQCG*HGNCFS
Trigger: GGAAAAACAATTGCCATGGCAACCACATTGAGATGC...CCCAACCCCAGTACTCCTGCTCTCCGGTGCCACCTCACCTTCTTTGGCTTCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000428668.2
ENST00000610466.4
CDS-3UTR GCA 90 bp CTGCCAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCCTTCTTCATCAGAGACTaGTCTGCAAACCCTGGTTTG +
Preference number: 4 (lower is better)
Translates to: LPVGLSLCASCLSSAPLPFFIRD*SANPGL
Trigger: CAAACCAGGGTTTGCAGAGCAGTCTCTGATGAAGAA...GGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTGGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR GCA 90 bp ACAAACTCCAGGCCCCCAGACAGACCCTGCTGGAGAGCATTCACACCTCTGAGGTTGTCTTCTAGCATCTaGTGTTCAATCCATGACTCC +
Preference number: 4 (lower is better)
Translates to: TNSRPPDRPCWRAFTPLRLSSSI*CSIHDS
Trigger: GGAGTCATGGATTGAACAGCAGATGCTAGAAGACAA...CCTCAGAGGTGTGAATGCTCTCCAGCAGGGTCTGTCTGGGGGCCTGGAGTTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR GCA 90 bp AGAGGGAAGAAGCCAAAGAAGGTGAGGTGGCACCGGAGAGCAGGAGTACTGGGGTTGTCTTCTAGCATCTaGTGTTCAATCCATGACTCC +
Preference number: 4 (lower is better)
Translates to: RGKKPKKVRWHRRAGVLGLSSSI*CSIHDS
Trigger: GGAGTCATGGATTGAACAGCAGATGCTAGAAGACAA...CCCCAGTACTCCTGCTCTCCGGTGCCACCTCACCTTCTTTGGCTTCTTCCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000428668.2
ENST00000610466.4
CDS-3UTR GCA 90 bp TTTAATAAGCAGCAAATCAAATACAAACTCCAGGCCCCCAGACAGACCCTGCTGGCCACTGGAGGCTGCTaGTGTGGCCGAACTGCATGT +
Preference number: 4 (lower is better)
Translates to: FNKQQIKYKLQAPRQTLLATGGC*CGRTAC
Trigger: ACATGCAGTTCGGCCACAGCAGCAGCCTCCAGTGGC...CAGCAGGGTCTGTCTGGGGGCCTGGAGTTTGTATTTGATTTGCTGCTTATTAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR GCA 90 bp CAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCCGAGTGGGGGCGGGTCTCTGTaGACTTTGTTTTTCTTCATA +
Preference number: 4 (lower is better)
Translates to: QLVCLCVPLVYLRHPCPSGGGSL*TLFFFI
Trigger: TATGAAGAAAAACAAAGTGCACAGAGACCCGCCCCC...ACTCGGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR CCA 90 bp AATACAAACTCCAGGCCCCCAGACAGACCCTGCTGGAGAGCATTCACACCTCTGTGTACATCTCTGCCATaGCCTGCATCTCAATGTGGT +
Preference number: 4 (lower is better)
Translates to: NTNSRPPDRPCWRAFTPLCTSLP*PASQCG
Trigger: ACCACATTGAGATGCAGGCCATGGCAGAGATGTACA...CAGAGGTGTGAATGCTCTCCAGCAGGGTCTGTCTGGGGGCCTGGAGTTTGTATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR CCA 90 bp GCCTCTTGTCTATCTTCGGCACCCTTGCCCGAGTCCCTGGGGTTGGGAGATGGTCCTCCGATGTTTTTATaGCATTCTTCATCAGAGACT +
Preference number: 4 (lower is better)
Translates to: ASCLSSAPLPESLGLGDGPPMFL*HSSSET
Trigger: AGTCTCTGATGAAGAATGCCATAAAAACATCGGAGG...ACCATCTCCCAACCCCAGGGACTCGGGCAAGGGTGCCGAAGATAGACAAGAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396743.7
ENST00000455452.5
CDS-3UTR CCA 90 bp GATAGTGGCAGCGGCAATGAGAGAGAGTGCAGGGGTGGGCTAGCCAGAGGGAAGCCTCCGATGTTTTTATaGCATTCTTCATCAGAGACT +
Preference number: 4 (lower is better)
Translates to: DSGSGNERECRGGLARGKPPMFL*HSSSET
Trigger: AGTCTCTGATGAAGAATGCCATAAAAACATCGGAGG...CTTCCCTCTGGCTAGCCCACCCCTGCACTCTCTCTCATTGCCGCTGCCACTATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000428668.2
ENST00000610466.4
CDS-3UTR CCA 90 bp ATGAGGGGCAGGGAGACTTTCCTCTGTCTGAATGTCTCTCTCCTCTGGGGCTGCCAAGGACATTACAGATaGCGGATCTTGTCAACACCT +
Preference number: 4 (lower is better)
Translates to: MRGRETFLCLNVSLLWGCQGHYR*RILSTP
Trigger: AGGTGTTGACAAGATCCGCCATCTGTAATGTCCTTG...GCAGCCCCAGAGGAGAGAGACATTCAGACAGAGGAAAGTCTCCCTGCCCCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR TCA 90 bp ATCAAATACAAACTCCAGGCCCCCAGACAGACCCTGCTGGAGAGCATTCACACCGGTTCGTCCTCGTTTTaGTGTATCCCATGGAATGTG +
Preference number: 4 (lower is better)
Translates to: IKYKLQAPRQTLLESIHTGSSSF*CIPWNV
Trigger: CACATTCCATGGGATACATCAAAACGAGGACGAACC...GGTGTGAATGCTCTCCAGCAGGGTCTGTCTGGGGGCCTGGAGTTTGTATTTGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR TCA 90 bp GAAGAAGCCAAAGAAGGTGAGGTGGCACCGGAGAGCAGGAGTACTGGGGTTGGGGTTAGGATTCACCACTaGATTATAGTGGATATTCCG +
Preference number: 4 (lower is better)
Translates to: EEAKEGEVAPESRSTGVGVRIHH*IIVDIP
Trigger: CGGAATATCCACTATAATTCAGTGGTGAATCCTAAC...CCCAACCCCAGTACTCCTGCTCTCCGGTGCCACCTCACCTTCTTTGGCTTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000428668.2
ENST00000610466.4
CDS-3UTR TCA 90 bp CTGCCAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCCCTGCTGTTCAATCCATaGCTCCTCCGATGTTTTTAT +
Preference number: 4 (lower is better)
Translates to: LPVGLSLCASCLSSAPLPLLFNP*LLRCFY
Trigger: ATAAAAACATCGGAGGAGTCATGGATTGAACAGCAG...GGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTGGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR TCA 90 bp TGCCAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCCGCTGCTGTTCAATCCATaGCTCCTCCGATGTTTTTAT +
Preference number: 4 (lower is better)
Translates to: CQLVCLCVPLVYLRHPCPLLFNP*LLRCFY
Trigger: ATAAAAACATCGGAGGAGTCATGGATTGAACAGCAG...CGGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR GCA 90 bp GGAGGTTTAATAAGCAGCAAATCAAATACAAACTCCAGGCCCCCAGACAGACCCTCAAACCAATGCTCCTaGTGCTCGACAGTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: GGLISSKSNTNSRPPDRPSNQCS*CSTVAG
Trigger: CCCTGCCACTGTCGAGCAGCAGGAGCATTGGTTTGA...GGGTCTGTCTGGGGGCCTGGAGTTTGTATTTGATTTGCTGCTTATTAAACCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR GCA 90 bp CTGCCAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCCTCATCAGATAGTCCATaGAATGCTTTCGCACAACCT +
Preference number: 4 (lower is better)
Translates to: LPVGLSLCASCLSSAPLPSSDSP*NAFAQP
Trigger: AGGTTGTGCGAAAGCATTGCATGGACTATCTGATGA...GGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR GCA 90 bp TGCCAAGGCTGCTCCCACACTCCCTACACTCAAATCCCGGGTGGCAGCCATAATTCATCAGATAGTCCATaGAATGCTTTCGCACAACCT +
Preference number: 4 (lower is better)
Translates to: CQGCSHTPYTQIPGGSHNSSDSP*NAFAQP
Trigger: AGGTTGTGCGAAAGCATTGCATGGACTATCTGATGA...ATTATGGCTGCCACCCGGGATTTGAGTGTAGGGAGTGTGGGAGCAGCCTTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR GCA 90 bp TGCCAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCCGCCTTCACAGAGCCAGTaGTGTCGTCTATATCATTTT +
Preference number: 4 (lower is better)
Translates to: CQLVCLCVPLVYLRHPCPPSQSQ*CRLYHF
Trigger: AAAATGATATAGACGACAGCACTGGCTCTGTGAAGG...CGGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR CCA 90 bp AACTCCAGGCCCCCAGACAGACCCTGCTGGAGAGCATTCACACCTCTGAGGTCACCTCCGATGTTTTTATaGCATTCTTCATCAGAGACT +
Preference number: 4 (lower is better)
Translates to: NSRPPDRPCWRAFTPLRSPPMFL*HSSSET
Trigger: AGTCTCTGATGAAGAATGCCATAAAAACATCGGAGG...TGACCTCAGAGGTGTGAATGCTCTCCAGCAGGGTCTGTCTGGGGGCCTGGAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR CCA 90 bp AGAGGGAAGAAGCCAAAGAAGGTGAGGTGGCACCGGAGAGCAGGAGTACTGGGGCCTCCGATGTTTTTATaGCATTCTTCATCAGAGACT +
Preference number: 4 (lower is better)
Translates to: RGKKPKKVRWHRRAGVLGPPMFL*HSSSET
Trigger: AGTCTCTGATGAAGAATGCCATAAAAACATCGGAGG...CCCCAGTACTCCTGCTCTCCGGTGCCACCTCACCTTCTTTGGCTTCTTCCCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000428668.2
ENST00000610466.4
CDS-3UTR CCA 90 bp ACAGAACAGAGTCGCTCAGGGAAACTGACATTTGGTTTTATTGTGCCAAGGACACGGCCTCCATGCAGCTaGAGGCCAGAAGACAGCAAC +
Preference number: 4 (lower is better)
Translates to: TEQSRSGKLTFGFIVPRTRPPCS*RPEDSN
Trigger: GTTGCTGTCTTCTGGCCTCCAGCTGCATGGAGGCCG...TGTCCTTGGCACAATAAAACCAAATGTCAGTTTCCCTGAGCGACTCTGTTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR TCA 90 bp TGCCAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCCGGTTAGGATTCACCACTaGATTATAGTGGATATTCCG +
Preference number: 4 (lower is better)
Translates to: CQLVCLCVPLVYLRHPCPVRIHH*IIVDIP
Trigger: CGGAATATCCACTATAATTCAGTGGTGAATCCTAAC...CGGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR TCA 90 bp ATGAGGGGCAGGGAGACTTTCCTCTGTCTGAATGTCTCTCTCCTCTGGGGCTGCGTTAGGATTCACCACTaGATTATAGTGGATATTCCG +
Preference number: 4 (lower is better)
Translates to: MRGRETFLCLNVSLLWGCVRIHH*IIVDIP
Trigger: CGGAATATCCACTATAATTCAGTGGTGAATCCTAAC...GCAGCCCCAGAGGAGAGAGACATTCAGACAGAGGAAAGTCTCCCTGCCCCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR TCA 90 bp AATACAAACTCCAGGCCCCCAGACAGACCCTGCTGGAGAGCATTCACACCTCTGCTGCTGTTCAATCCATaGCTCCTCCGATGTTTTTAT +
Preference number: 4 (lower is better)
Translates to: NTNSRPPDRPCWRAFTPLLLFNP*LLRCFY
Trigger: ATAAAAACATCGGAGGAGTCATGGATTGAACAGCAG...CAGAGGTGTGAATGCTCTCCAGCAGGGTCTGTCTGGGGGCCTGGAGTTTGTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR GCA 90 bp GAACAGAGTCGCTCAGGGAAACTGACATTTGGTTTTATTGTGCCAAGGACATTAAGCCTCGATGCGTGCTaGAGCCGCCTCATACTCGTC +
Preference number: 4 (lower is better)
Translates to: EQSRSGKLTFGFIVPRTLSLDAC*SRLILV
Trigger: GACGAGTATGAGGCGGCTGCAGCACGCATCGAGGCT...TAATGTCCTTGGCACAATAAAACCAAATGTCAGTTTCCCTGAGCGACTCTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR GCA 90 bp CAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCCGAGTTCATCAGATAGTCCATaGAATGCTTTCGCACAACCT +
Preference number: 4 (lower is better)
Translates to: QLVCLCVPLVYLRHPCPSSSDSP*NAFAQP
Trigger: AGGTTGTGCGAAAGCATTGCATGGACTATCTGATGA...ACTCGGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR GCA 90 bp CAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCCGAGTGCATCTCAATGTGGTTaGCATGGCAATTGTTTTTCC +
Preference number: 4 (lower is better)
Translates to: QLVCLCVPLVYLRHPCPSASQCG*HGNCFS
Trigger: GGAAAAACAATTGCCATGGCAACCACATTGAGATGC...ACTCGGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR GCA 90 bp CAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCCGAGTTTGTCTTCTAGCATCTaGTGTTCAATCCATGACTCC +
Preference number: 4 (lower is better)
Translates to: QLVCLCVPLVYLRHPCPSLSSSI*CSIHDS
Trigger: GGAGTCATGGATTGAACAGCAGATGCTAGAAGACAA...ACTCGGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR GCA 90 bp TTTAATAAGCAGCAAATCAAATACAAACTCCAGGCCCCCAGACAGACCCTGCTGTATCTTCGGCACCCTTaGCCGAGTCCCCTGTGGAAT +
Preference number: 4 (lower is better)
Translates to: FNKQQIKYKLQAPRQTLLYLRHP*PSPLWN
Trigger: ATTCCACAGGGGACTCGGGCAAGGGTGCCGAAGATA...CAGCAGGGTCTGTCTGGGGGCCTGGAGTTTGTATTTGATTTGCTGCTTATTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376488.8
CDS-3UTR GCA 90 bp GAACAGAGTCGCTCAGGGAAACTGACATTTGGTTTTATTGTGCCAAGGACATTACTGGGGCTGCCTGGCTaGCAGTTGGTCTGTCTCTGT +
Preference number: 4 (lower is better)
Translates to: EQSRSGKLTFGFIVPRTLLGLPG*QLVCLC
Trigger: ACAGAGACAGACCAACTGGCAGCCAGGCAGCCCCAG...TAATGTCCTTGGCACAATAAAACCAAATGTCAGTTTCCCTGAGCGACTCTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR GCA 90 bp CAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCCGAGTCCTTCACAGAGCCAGTaGTGTCGTCTATATCATTTT +
Preference number: 4 (lower is better)
Translates to: QLVCLCVPLVYLRHPCPSPSQSQ*CRLYHF
Trigger: AAAATGATATAGACGACAGCACTGGCTCTGTGAAGG...ACTCGGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR GCA 90 bp GAAGAAGCCAAAGAAGGTGAGGTGGCACCGGAGAGCAGGAGTACTGGGGTTGGGCATTTGGTTTTATTGTaGCAAGGACATTACAGATGG +
Preference number: 4 (lower is better)
Translates to: EEAKEGEVAPESRSTGVGHLVLL*QGHYRW
Trigger: CCATCTGTAATGTCCTTGGCACAATAAAACCAAATG...CCCAACCCCAGTACTCCTGCTCTCCGGTGCCACCTCACCTTCTTTGGCTTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000156084.8
ENST00000376488.8
CDS-3UTR CCA 90 bp TTTAATAAGCAGCAAATCAAATACAAACTCCAGGCCCCCAGACAGACCCTGCTGTGGTCTCCATACACCTaGTCAGCTACAGCCCGGAAG +
Preference number: 4 (lower is better)
Translates to: FNKQQIKYKLQAPRQTLLWSPYT*SATARK
Trigger: CTTCCGGGCTGTAGCTGACCAGGTGTATGGAGACCA...CAGCAGGGTCTGTCTGGGGGCCTGGAGTTTGTATTTGATTTGCTGCTTATTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR CCA 90 bp TGCCAAGGCTGCTCCCACACTCCCTACACTCAAATCCCGGGTGGCAGCCATAATCCTCCGATGTTTTTATaGCATTCTTCATCAGAGACT +
Preference number: 4 (lower is better)
Translates to: CQGCSHTPYTQIPGGSHNPPMFL*HSSSET
Trigger: AGTCTCTGATGAAGAATGCCATAAAAACATCGGAGG...ATTATGGCTGCCACCCGGGATTTGAGTGTAGGGAGTGTGGGAGCAGCCTTGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR CCA 90 bp GAACAGAGTCGCTCAGGGAAACTGACATTTGGTTTTATTGTGCCAAGGACATTACTGACTGCTTGTACCTaGCGCACAGGGCGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: EQSRSGKLTFGFIVPRTLLTACT*RTGRRR
Trigger: CCTCCTTCGCCCTGTGCGCCAGGTACAAGCAGTCAG...TAATGTCCTTGGCACAATAAAACCAAATGTCAGTTTCCCTGAGCGACTCTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR CCA 90 bp TGCTGGAGAGCATTCACACCTCTGAGGTCAAGCCAAGGTCCGTGCCATTGCATCCCTCCGATGTTTTTATaGCATTCTTCATCAGAGACT +
Preference number: 4 (lower is better)
Translates to: CWRAFTPLRSSQGPCHCIPPMFL*HSSSET
Trigger: AGTCTCTGATGAAGAATGCCATAAAAACATCGGAGG...GATGCAATGGCACGGACCTTGGCTTGACCTCAGAGGTGTGAATGCTCTCCAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR GCA 90 bp CAGCAAATCAAATACAAACTCCAGGCCCCCAGACAGACCCTGCTGGAGAGCATTGCATCTCAATGTGGTTaGCATGGCAATTGTTTTTCC +
Preference number: 4 (lower is better)
Translates to: QQIKYKLQAPRQTLLESIASQCG*HGNCFS
Trigger: GGAAAAACAATTGCCATGGCAACCACATTGAGATGC...AATGCTCTCCAGCAGGGTCTGTCTGGGGGCCTGGAGTTTGTATTTGATTTGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR GCA 90 bp TGCTGGAGAGCATTCACACCTCTGAGGTCAAGCCAAGGTCCGTGCCATTGCATCCATTTGGTTTTATTGTaGCAAGGACATTACAGATGG +
Preference number: 4 (lower is better)
Translates to: CWRAFTPLRSSQGPCHCIHLVLL*QGHYRW
Trigger: CCATCTGTAATGTCCTTGGCACAATAAAACCAAATG...GATGCAATGGCACGGACCTTGGCTTGACCTCAGAGGTGTGAATGCTCTCCAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR GCA 90 bp TTTAATAAGCAGCAAATCAAATACAAACTCCAGGCCCCCAGACAGACCCTGCTGTTTCGCACAACCTCATaGATGTCCTGGTCTCCATAC +
Preference number: 4 (lower is better)
Translates to: FNKQQIKYKLQAPRQTLLFRTTS*MSWSPY
Trigger: GTATGGAGACCAGGACATGCATGAGGTTGTGCGAAA...CAGCAGGGTCTGTCTGGGGGCCTGGAGTTTGTATTTGATTTGCTGCTTATTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR TCA 90 bp GGAGGTTTAATAAGCAGCAAATCAAATACAAACTCCAGGCCCCCAGACAGACCCCTGCTGTTCAATCCATaGCTCCTCCGATGTTTTTAT +
Preference number: 4 (lower is better)
Translates to: GGLISSKSNTNSRPPDRPLLFNP*LLRCFY
Trigger: ATAAAAACATCGGAGGAGTCATGGATTGAACAGCAG...GGGTCTGTCTGGGGGCCTGGAGTTTGTATTTGATTTGCTGCTTATTAAACCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR TCA 90 bp ACAGAACAGAGTCGCTCAGGGAAACTGACATTTGGTTTTATTGTGCCAAGGACATCCCATGGAATGTGTTaGTGGGTTCTGTGCTGTACT +
Preference number: 4 (lower is better)
Translates to: TEQSRSGKLTFGFIVPRTSHGMC*WVLCCT
Trigger: AGTACAGCACAGAACCCATCAACACATTCCATGGGA...TGTCCTTGGCACAATAAAACCAAATGTCAGTTTCCCTGAGCGACTCTGTTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR TCA 90 bp TTTAATAAGCAGCAAATCAAATACAAACTCCAGGCCCCCAGACAGACCCTGCTGGTCGCTCAGGGAAACTaGCATTTGGTTTTATTGTGC +
Preference number: 4 (lower is better)
Translates to: FNKQQIKYKLQAPRQTLLVAQGN*HLVLLC
Trigger: GCACAATAAAACCAAATGTCAGTTTCCCTGAGCGAC...CAGCAGGGTCTGTCTGGGGGCCTGGAGTTTGTATTTGATTTGCTGCTTATTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS CCA 90 bp GTCGCCGGGACCGCCGCCGGGACCACCTGGGCCCCCGCAAGGAGGTaGAGAAGCCTGTTGTGGCCGGGGACCCGCCACTGCACCAGGCGG +
Preference number: 5 (lower is better)
Translates to: VAGTAAGTTWAPARR*RSLLWPGTRHCTRR
Trigger: CCGCCTGGTGCAGTGGCGGGTCCCCGGCCACAACAGGCTTCTCCACCTCCTTGCGGGGGCCCAGGTGGTCCCGGCGGCGGTCCCGGCGAC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000610466.4
CDS CCA 90 bp GCCGGGACCACCTGGGCCCCCGCAAGGAGGTGGAGAAGCCTGTTGTaGCCGGGGACCCGCCACTGCACCAGGCGGCACGGCCAGCGCCCA +
Preference number: 5 (lower is better)
Translates to: AGTTWAPARRWRSLL*PGTRHCTRRHGQRP
Trigger: TGGGCGCTGGCCGTGCCGCCTGGTGCAGTGGCGGGTCCCCGGCCACAACAGGCTTCTCCACCTCCTTGCGGGGGCCCAGGTGGTCCCGGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000610466.4
CDS GCA 90 bp CCCGCAAGGAGGTGGAGAAGCCTGTTGTGGCCGGGGACCCGCCACTaGACCAGGCGGCACGGCCAGCGCCCAGCGATGAAGAGCGCCCGG +
Preference number: 5 (lower is better)
Translates to: PARRWRSLLWPGTRH*TRRHGQRPAMKSAR
Trigger: CCGGGCGCTCTTCATCGCTGGGCGCTGGCCGTGCCGCCTGGTGCAGTGGCGGGTCCCCGGCCACAACAGGCTTCTCCACCTCCTTGCGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000610466.4
CDS GCA 90 bp CGTCCTCACTGTTGTAGCCTGCGCCGACCTCCTCACGCTCGGGACTaGCCCCGCCAACCGCGCCAACCCCGGGAGCTTGACGTCGCCGCT +
Preference number: 5 (lower is better)
Translates to: RPHCCSLRRPPHARD*PRQPRQPRELDVAA
Trigger: AGCGGCGACGTCAAGCTCCCGGGGTTGGCGCGGTTGGCGGGGGCAGTCCCGAGCGTGAGGAGGTCGGCGCAGGCTACAACAGTGAGGACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS GCA 90 bp CCGCGGGGACCGGCTAGTCCACTCCTCCAGGCCACTGGAGGCTGCTaGTGTGGCCGAACTGCATGTGGCGCTGGCTTTCCGGGGCTGGCT +
Preference number: 5 (lower is better)
Translates to: PRGPASPLLQATGGC*CGRTACGAGFPGLA
Trigger: AGCCAGCCCCGGAAAGCCAGCGCCACATGCAGTTCGGCCACAGCAGCAGCCTCCAGTGGCCTGGAGGAGTGGACTAGCCGGTCCCCGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000428668.2
ENST00000455452.5
ENST00000610466.4
CDS GCA 90 bp CTGCCGCGGGGACCGGCTAGTCCACTCCTCCAGGCCACTGGAGGCTaGTGCTGTGGCCGAACTGCATGTGGCGCTGGCTTTCCGGGGCTG +
Preference number: 5 (lower is better)
Translates to: LPRGPASPLLQATGG*CCGRTACGAGFPGL
Trigger: CAGCCCCGGAAAGCCAGCGCCACATGCAGTTCGGCCACAGCAGCAGCCTCCAGTGGCCTGGAGGAGTGGACTAGCCGGTCCCCGCGGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000428668.2
ENST00000455452.5
ENST00000610466.4
CDS GCA 90 bp GATGCGTGCTGCAGCCGCCTCATACTCGTCCTCACTGTTGTAGCCTaGGCCGACCTCCTCACGCTCGGGACTGCCCCCGCCAACCGCGCC +
Preference number: 5 (lower is better)
Translates to: DACCSRLILVLTVVA*ADLLTLGTAPANRA
Trigger: GGCGCGGTTGGCGGGGGCAGTCCCGAGCGTGAGGAGGTCGGCGCAGGCTACAACAGTGAGGACGAGTATGAGGCGGCTGCAGCACGCATC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR CAA 90 bp TCTGAGGTCAAGCCAAGGTCCGTGCCATTGCATCCTCTGCCCAGAGGCCCGCCCGCCAACCCCGGGAGCTaGACGTCGCCGCTTGCTGTG +
Preference number: 5 (lower is better)
Translates to: SEVKPRSVPLHPLPRGPPANPGS*TSPLAV
Trigger: CACAGCAAGCGGCGACGTCAAGCTCCCGGGGTTGGC...GGGCGGGCCTCTGGGCAGAGGATGCAATGGCACGGACCTTGGCTTGACCTCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR CAA 90 bp GGTCAGGGTTTCATTGTCCAAGCCGGCCTGACACCTGCCGCCCTGCCCTTGCCCCCAAGGTCCGTGCCATaGCATCCTCTGCCCAGAGGC +
Preference number: 5 (lower is better)
Translates to: GQGFIVQAGLTPAALPLPPRSVP*HPLPRG
Trigger: GCCTCTGGGCAGAGGATGCAATGGCACGGACCTTGG...GGGCAAGGGCAGGGCGGCAGGTGTCAGGCCGGCTTGGACAATGAAACCCTGACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR CAA 90 bp GGTCAGGGTTTCATTGTCCAAGCCGGCCTGACACCTGCCGCCCTGCCCTTGCCCCTATCTTCGGCACCCTaGCCCGAGTCCCTGGGGTTG +
Preference number: 5 (lower is better)
Translates to: GQGFIVQAGLTPAALPLPLSSAP*PESLGL
Trigger: CAACCCCAGGGACTCGGGCAAGGGTGCCGAAGATAG...GGGCAAGGGCAGGGCGGCAGGTGTCAGGCCGGCTTGGACAATGAAACCCTGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396743.7
ENST00000455452.5
CDS-3UTR CAA 90 bp GATAGTGGCAGCGGCAATGAGAGAGAGTGCAGGGGTGGGCTAGCCAGAGGGAAGAGGTGGAGAAGCCTGTaGTGGCCGGGGACCCGCCAC +
Preference number: 5 (lower is better)
Translates to: DSGSGNERECRGGLARGKRWRSL*WPGTRH
Trigger: GTGGCGGGTCCCCGGCCACAACAGGCTTCTCCACCT...CTTCCCTCTGGCTAGCCCACCCCTGCACTCTCTCTCATTGCCGCTGCCACTATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000610466.4
CDS-3UTR CAA 90 bp TCAGGGTTTCATTGTCCAAGCCGGCCTGACACCTGCCGCCCTGCCCTTGCCCAGCCGAGAACTGACTGCTaGTACCTGGCGCACAGGGCG +
Preference number: 5 (lower is better)
Translates to: SGFHCPSRPDTCRPALAQPRTDC*YLAHRA
Trigger: CGCCCTGTGCGCCAGGTACAAGCAGTCAGTTCTCGG...CTGGGCAAGGGCAGGGCGGCAGGTGTCAGGCCGGCTTGGACAATGAAACCCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR CAA 90 bp GGTCAGGGTTTCATTGTCCAAGCCGGCCTGACACCTGCCGCCCTGCCCTTGCCCCTATCTTCGGCACCCTaGCCCGAGTCCCCTGTGGAA +
Preference number: 5 (lower is better)
Translates to: GQGFIVQAGLTPAALPLPLSSAP*PESPVE
Trigger: TTCCACAGGGGACTCGGGCAAGGGTGCCGAAGATAG...GGGCAAGGGCAGGGCGGCAGGTGTCAGGCCGGCTTGGACAATGAAACCCTGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000156084.8
ENST00000376488.8
CDS GCA 90 bp CTCCTGCTGCTCGACAGTGGCAGGGTCCATAGCCTCGATGCGTGCTaGAGCCGCCTCATACTCGTCCTCACTGTTGTAGCCTGCGCCGAC +
Preference number: 5 (lower is better)
Translates to: LLLLDSGRVHSLDAC*SRLILVLTVVACAD
Trigger: GTCGGCGCAGGCTACAACAGTGAGGACGAGTATGAGGCGGCTGCAGCACGCATCGAGGCTATGGACCCTGCCACTGTCGAGCAGCAGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR CAA 90 bp GAAGAAGCCAAAGAAGGTGAGGTGGCACCGGAGAGCAGGAGTACTGGGGTTGGGGCCAACCCCGGGAGCTaGACGTCGCCGCTTGCTGTG +
Preference number: 5 (lower is better)
Translates to: EEAKEGEVAPESRSTGVGANPGS*TSPLAV
Trigger: CACAGCAAGCGGCGACGTCAAGCTCCCGGGGTTGGC...CCCAACCCCAGTACTCCTGCTCTCCGGTGCCACCTCACCTTCTTTGGCTTCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000610466.4
CDS-3UTR CAA 90 bp AACTCCAGGCCCCCAGACAGACCCTGCTGGAGAGCATTCACACCTCTGAGGTCAGCCAACCCCGGGAGCTaGACGTCGCCGCTTGCTGTG +
Preference number: 5 (lower is better)
Translates to: NSRPPDRPCWRAFTPLRSANPGS*TSPLAV
Trigger: CACAGCAAGCGGCGACGTCAAGCTCCCGGGGTTGGC...TGACCTCAGAGGTGTGAATGCTCTCCAGCAGGGTCTGTCTGGGGGCCTGGAGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR CAA 90 bp TGTCTATCTTCGGCACCCTTGCCCGAGTCCCTGGGGTTGGGAGATGGTGTCCAAGCCAACCCCGGGAGCTaGACGTCGCCGCTTGCTGTG +
Preference number: 5 (lower is better)
Translates to: CLSSAPLPESLGLGDGVQANPGS*TSPLAV
Trigger: CACAGCAAGCGGCGACGTCAAGCTCCCGGGGTTGGC...TTGGACACCATCTCCCAACCCCAGGGACTCGGGCAAGGGTGCCGAAGATAGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396743.7
ENST00000455452.5
CDS-3UTR CAA 90 bp GCCCTGCCCTTGCCCAGTGCACACCCTAGACCCTGGGCCGGCCTCCATGCAGCTGTCTCTGTGTGCCTCTaGTCTATCTTCGGCACCCTT +
Preference number: 5 (lower is better)
Translates to: ALPLPSAHPRPWAGLHAAVSVCL*SIFGTL
Trigger: AAGGGTGCCGAAGATAGACAAGAGGCACACAGAGAC...AGCTGCATGGAGGCCGGCCCAGGGTCTAGGGTGTGCACTGGGCAAGGGCAGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS GCA 90 bp ATGCTCCTGCTGCTCGACAGTGGCAGGGTCCATAGCCTCGATGCGTaGTGCAGCCGCCTCATACTCGTCCTCACTGTTGTAGCCTGCGCC +
Preference number: 5 (lower is better)
Translates to: MLLLLDSGRVHSLDA*CSRLILVLTVVACA
Trigger: GGCGCAGGCTACAACAGTGAGGACGAGTATGAGGCGGCTGCAGCACGCATCGAGGCTATGGACCCTGCCACTGTCGAGCAGCAGGAGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR CAA 90 bp GGTCAGGGTTTCATTGTCCAAGCCGGCCTGACACCTGCCGCCCTGCCCTTGCCCGGCGGCGGCTTCTTTTaGGGGAGTATAGTCATGGCT +
Preference number: 5 (lower is better)
Translates to: GQGFIVQAGLTPAALPLPGGGFF*GSIVMA
Trigger: AGCCATGACTATACTCCCCAAAAAGAAGCCGCCGCC...GGGCAAGGGCAGGGCGGCAGGTGTCAGGCCGGCTTGGACAATGAAACCCTGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
CDS-3UTR CAA 90 bp GATAGTGGCAGCGGCAATGAGAGAGAGTGCAGGGGTGGGCTAGCCAGAGGGAAGCCGAGAACTGACTGCTaGTACCTGGCGCACAGGGCG +
Preference number: 5 (lower is better)
Translates to: DSGSGNERECRGGLARGKPRTDC*YLAHRA
Trigger: CGCCCTGTGCGCCAGGTACAAGCAGTCAGTTCTCGG...CTTCCCTCTGGCTAGCCCACCCCTGCACTCTCTCTCATTGCCGCTGCCACTATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000428668.2
ENST00000610466.4
CDS-3UTR CAA 90 bp TCAGGGTTTCATTGTCCAAGCCGGCCTGACACCTGCCGCCCTGCCCTTGCCCAGCAGCAACCCATATCTTaGCACCCTCCTCCATGCCCC +
Preference number: 5 (lower is better)
Translates to: SGFHCPSRPDTCRPALAQQQPIS*HPPPCP
Trigger: GGGGCATGGAGGAGGGTGCAAAGATATGGGTTGCTG...CTGGGCAAGGGCAGGGCGGCAGGTGTCAGGCCGGCTTGGACAATGAAACCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS CCA 90 bp AACCAATGCTCCTGCTGCAGGCGTCGGTACTGCGGACGGACAGCGTaGCCTGTCCCACGTACGACAGGAAAAACACCTCCCCTCCAGGAT +
Preference number: 5 (lower is better)
Translates to: NQCSCCRRRYCGRTA*PVPRTTGKTPPLQD
Trigger: ATCCTGGAGGGGAGGTGTTTTTCCTGTCGTACGTGGGACAGGCCACGCTGTCCGTCCGCAGTACCGACGCCTGCAGCAGGAGCATTGGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428668.2
CDS-3UTR CAA 90 bp CAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCCGAGTAGGTGGAGAAGCCTGTaGTGGCCGGGGACCCGCCAC +
Preference number: 5 (lower is better)
Translates to: QLVCLCVPLVYLRHPCPSRWRSL*WPGTRH
Trigger: GTGGCGGGTCCCCGGCCACAACAGGCTTCTCCACCT...ACTCGGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000610466.4
CDS-3UTR CAA 90 bp TGGCTGCCAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGGCCAACCCCGGGAGCTaGACGTCGCCGCTTGCTGTG +
Preference number: 5 (lower is better)
Translates to: WLPVGLSLCASCLSSAPLANPGS*TSPLAV
Trigger: CACAGCAAGCGGCGACGTCAAGCTCCCGGGGTTGGC...CAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTGGCAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR CAA 90 bp GCCCTGCCCTTGCCCAGTGCACACCCTAGACCCTGGGCCGGCCTCCATGCAGCTACACCAATGGTGGCCTaGTTAGGATTCACCACTGAA +
Preference number: 5 (lower is better)
Translates to: ALPLPSAHPRPWAGLHAATPMVA*LGFTTE
Trigger: TTCAGTGGTGAATCCTAACAAGGCCACCATTGGTGT...AGCTGCATGGAGGCCGGCCCAGGGTCTAGGGTGTGCACTGGGCAAGGGCAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR CAA 90 bp GTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCCGAGTCCCTGGCCGAGAACTGACTGCTaGTACCTGGCGCACAGGGCG +
Preference number: 5 (lower is better)
Translates to: VCLCVPLVYLRHPCPSPWPRTDC*YLAHRA
Trigger: CGCCCTGTGCGCCAGGTACAAGCAGTCAGTTCTCGG...CCAGGGACTCGGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396743.7
ENST00000455452.5
CDS-3UTR CAA 90 bp GGTCAGGGTTTCATTGTCCAAGCCGGCCTGACACCTGCCGCCCTGCCCTTGCCCGTCTCTGTGTGCCTCTaGTCTATCTTCGGCACCCTT +
Preference number: 5 (lower is better)
Translates to: GQGFIVQAGLTPAALPLPVSVCL*SIFGTL
Trigger: AAGGGTGCCGAAGATAGACAAGAGGCACACAGAGAC...GGGCAAGGGCAGGGCGGCAGGTGTCAGGCCGGCTTGGACAATGAAACCCTGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR CAA 90 bp ACGGGTGCCCCATCTGCCAAGGCTGCTCCCACACTCCCTACACTCAAATCCCGGCAGCAACCCATATCTTaGCACCCTCCTCCATGCCCC +
Preference number: 5 (lower is better)
Translates to: TGAPSAKAAPTLPTLKSRQQPIS*HPPPCP
Trigger: GGGGCATGGAGGAGGGTGCAAAGATATGGGTTGCTG...CCGGGATTTGAGTGTAGGGAGTGTGGGAGCAGCCTTGGCAGATGGGGCACCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR CAA 90 bp GATAGTGGCAGCGGCAATGAGAGAGAGTGCAGGGGTGGGCTAGCCAGAGGGAAGCCTCGATGGCTTCATTaGTGGCCTCCCAGTCTGTGG +
Preference number: 5 (lower is better)
Translates to: DSGSGNERECRGGLARGKPRWLH*WPPSLW
Trigger: CCACAGACTGGGAGGCCACAAATGAAGCCATCGAGG...CTTCCCTCTGGCTAGCCCACCCCTGCACTCTCTCTCATTGCCGCTGCCACTATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000428668.2
ENST00000610466.4
CDS-3UTR CAA 90 bp GCATTCACACCTCTGAGGTCAAGCCAAGGTCCGTGCCATTGCATCCTCTGCCCACCGAGAACTGACTGCTaGTACCTGGCGCACAGGGCG +
Preference number: 5 (lower is better)
Translates to: AFTPLRSSQGPCHCILCPPRTDC*YLAHRA
Trigger: CGCCCTGTGCGCCAGGTACAAGCAGTCAGTTCTCGG...TGGGCAGAGGATGCAATGGCACGGACCTTGGCTTGACCTCAGAGGTGTGAATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR CAA 90 bp GAAGAAGCCAAAGAAGGTGAGGTGGCACCGGAGAGCAGGAGTACTGGGGTTGGGCTGCCTGGCTGCCAGTaGGTCTGTCTCTGTGTGCCT +
Preference number: 5 (lower is better)
Translates to: EEAKEGEVAPESRSTGVGLPGCQ*VCLCVP
Trigger: AGGCACACAGAGACAGACCAACTGGCAGCCAGGCAG...CCCAACCCCAGTACTCCTGCTCTCCGGTGCCACCTCACCTTCTTTGGCTTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000610466.4
CDS-3UTR CAA 90 bp GCCTCTTGTCTATCTTCGGCACCCTTGCCCGAGTCCCTGGGGTTGGGAGATGGTCAGCAACCCATATCTTaGCACCCTCCTCCATGCCCC +
Preference number: 5 (lower is better)
Translates to: ASCLSSAPLPESLGLGDGQQPIS*HPPPCP
Trigger: GGGGCATGGAGGAGGGTGCAAAGATATGGGTTGCTG...ACCATCTCCCAACCCCAGGGACTCGGGCAAGGGTGCCGAAGATAGACAAGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396743.7
ENST00000455452.5
CDS CCA 90 bp CCCGCAACCACTGCAGGTAGGATTCCCGAGCCACCTGCTCCTCGATaGCTTCATTTGTGGCCTCCCAGTCTGTGGCCCGTTTCTTGTCTT +
Preference number: 5 (lower is better)
Translates to: PATTAGRIPEPPAPR*LHLWPPSLWPVSCL
Trigger: AAGACAAGAAACGGGCCACAGACTGGGAGGCCACAAATGAAGCCATCGAGGAGCAGGTGGCTCGGGAATCCTACCTGCAGTGGTTGCGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000428668.2
ENST00000455452.5
ENST00000610466.4
CDS-3UTR CAA 90 bp GCCCTGCCCTTGCCCAGTGCACACCCTAGACCCTGGGCCGGCCTCCATGCAGCTTGCATCTCAATGTGGTaGCCATGGCAATTGTTTTTC +
Preference number: 5 (lower is better)
Translates to: ALPLPSAHPRPWAGLHAACISMW*PWQLFF
Trigger: GAAAAACAATTGCCATGGCAACCACATTGAGATGCA...AGCTGCATGGAGGCCGGCCCAGGGTCTAGGGTGTGCACTGGGCAAGGGCAGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR CAA 90 bp TCTGAGGTCAAGCCAAGGTCCGTGCCATTGCATCCTCTGCCCAGAGGCCCGCCCTCTGTGGCCCGTTTCTaGTCTTCTAGCATCTGCTGT +
Preference number: 5 (lower is better)
Translates to: SEVKPRSVPLHPLPRGPPSVARF*SSSICC
Trigger: ACAGCAGATGCTAGAAGACAAGAAACGGGCCACAGA...GGGCGGGCCTCTGGGCAGAGGATGCAATGGCACGGACCTTGGCTTGACCTCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR CAA 90 bp GAAGAAGCCAAAGAAGGTGAGGTGGCACCGGAGAGCAGGAGTACTGGGGTTGGGCCTCGATGGCTTCATTaGTGGCCTCCCAGTCTGTGG +
Preference number: 5 (lower is better)
Translates to: EEAKEGEVAPESRSTGVGPRWLH*WPPSLW
Trigger: CCACAGACTGGGAGGCCACAAATGAAGCCATCGAGG...CCCAACCCCAGTACTCCTGCTCTCCGGTGCCACCTCACCTTCTTTGGCTTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000428668.2
ENST00000610466.4
CDS-3UTR CAA 90 bp AGAGGGAAGAAGCCAAAGAAGGTGAGGTGGCACCGGAGAGCAGGAGTACTGGGGCCTCGATGGCTTCATTaGTGGCCTCCCAGTCTGTGG +
Preference number: 5 (lower is better)
Translates to: RGKKPKKVRWHRRAGVLGPRWLH*WPPSLW
Trigger: CCACAGACTGGGAGGCCACAAATGAAGCCATCGAGG...CCCCAGTACTCCTGCTCTCCGGTGCCACCTCACCTTCTTTGGCTTCTTCCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000428668.2
ENST00000610466.4
CDS-3UTR CAA 90 bp TGGCTGCCAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCGAGAACTGACTGCTaGTACCTGGCGCACAGGGCG +
Preference number: 5 (lower is better)
Translates to: WLPVGLSLCASCLSSAPLPRTDC*YLAHRA
Trigger: CGCCCTGTGCGCCAGGTACAAGCAGTCAGTTCTCGG...CAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTGGCAGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR CAA 90 bp ATGAGGGGCAGGGAGACTTTCCTCTGTCTGAATGTCTCTCTCCTCTGGGGCTGCCTATCTTCGGCACCCTaGCCCGAGTCCCCTGTGGAA +
Preference number: 5 (lower is better)
Translates to: MRGRETFLCLNVSLLWGCLSSAP*PESPVE
Trigger: TTCCACAGGGGACTCGGGCAAGGGTGCCGAAGATAG...GCAGCCCCAGAGGAGAGAGACATTCAGACAGAGGAAAGTCTCCCTGCCCCTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000610466.4
CDS-3UTR CAA 90 bp CCATCTGCCAAGGCTGCTCCCACACTCCCTACACTCAAATCCCGGGTGGCAGCCGTCTCTGTGTGCCTCTaGTCTATCTTCGGCACCCTT +
Preference number: 5 (lower is better)
Translates to: PSAKAAPTLPTLKSRVAAVSVCL*SIFGTL
Trigger: AAGGGTGCCGAAGATAGACAAGAGGCACACAGAGAC...GGCTGCCACCCGGGATTTGAGTGTAGGGAGTGTGGGAGCAGCCTTGGCAGATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR CAA 90 bp TGCCAAGGCTGCTCCCACACTCCCTACACTCAAATCCCGGGTGGCAGCCATAATCTGCCTGGCTGCCAGTaGGTCTGTCTCTGTGTGCCT +
Preference number: 5 (lower is better)
Translates to: CQGCSHTPYTQIPGGSHNLPGCQ*VCLCVP
Trigger: AGGCACACAGAGACAGACCAACTGGCAGCCAGGCAG...ATTATGGCTGCCACCCGGGATTTGAGTGTAGGGAGTGTGGGAGCAGCCTTGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR CAA 90 bp ATGAGGGGCAGGGAGACTTTCCTCTGTCTGAATGTCTCTCTCCTCTGGGGCTGCCTGCCTGGCTGCCAGTaGGTCTGTCTCTGTGTGCCT +
Preference number: 5 (lower is better)
Translates to: MRGRETFLCLNVSLLWGCLPGCQ*VCLCVP
Trigger: AGGCACACAGAGACAGACCAACTGGCAGCCAGGCAG...GCAGCCCCAGAGGAGAGAGACATTCAGACAGAGGAAAGTCTCCCTGCCCCTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR CAA 90 bp ACAAACTCCAGGCCCCCAGACAGACCCTGCTGGAGAGCATTCACACCTCTGAGGCAGCAACCCATATCTTaGCACCCTCCTCCATGCCCC +
Preference number: 5 (lower is better)
Translates to: TNSRPPDRPCWRAFTPLRQQPIS*HPPPCP
Trigger: GGGGCATGGAGGAGGGTGCAAAGATATGGGTTGCTG...CCTCAGAGGTGTGAATGCTCTCCAGCAGGGTCTGTCTGGGGGCCTGGAGTTTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR CAA 90 bp CAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCCGAGTCTATCTTCGGCACCCTaGCCCGAGTCCCTGGGGTTG +
Preference number: 5 (lower is better)
Translates to: QLVCLCVPLVYLRHPCPSLSSAP*PESLGL
Trigger: CAACCCCAGGGACTCGGGCAAGGGTGCCGAAGATAG...ACTCGGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396743.7
ENST00000455452.5
CDS TCA 90 bp AGAAGGAGGGAGCATCCACAGCAGGCCAGGTTGGGCAGGCTCGAATaGGGCACCATCTTTCCCTCACCTACCCACTGCAGAAGTACCTGT +
Preference number: 5 (lower is better)
Translates to: RRREHPQQARLGRLE*GTIFPSPTHCRSTC
Trigger: ACAGGTACTTCTGCAGTGGGTAGGTGAGGGAAAGATGGTGCCTCATTCGAGCCTGCCCAACCTGGCCTGCTGTGGATGCTCCCTCCTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484499.5
CDS-3UTR CAA 90 bp CAGGGTTTCATTGTCCAAGCCGGCCTGACACCTGCCGCCCTGCCCTTGCCCAGTACACCAATGGTGGCCTaGTTAGGATTCACCACTGAA +
Preference number: 5 (lower is better)
Translates to: QGFIVQAGLTPAALPLPSTPMVA*LGFTTE
Trigger: TTCAGTGGTGAATCCTAACAAGGCCACCATTGGTGT...ACTGGGCAAGGGCAGGGCGGCAGGTGTCAGGCCGGCTTGGACAATGAAACCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR CAA 90 bp CCATCTGCCAAGGCTGCTCCCACACTCCCTACACTCAAATCCCGGGTGGCAGCCTCTGTGGCCCGTTTCTaGTCTTCTAGCATCTGCTGT +
Preference number: 5 (lower is better)
Translates to: PSAKAAPTLPTLKSRVAASVARF*SSSICC
Trigger: ACAGCAGATGCTAGAAGACAAGAAACGGGCCACAGA...GGCTGCCACCCGGGATTTGAGTGTAGGGAGTGTGGGAGCAGCCTTGGCAGATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR CAA 90 bp ACGGGTGCCCCATCTGCCAAGGCTGCTCCCACACTCCCTACACTCAAATCCCGGTCTGTGGCCCGTTTCTaGTCTTCTAGCATCTGCTGT +
Preference number: 5 (lower is better)
Translates to: TGAPSAKAAPTLPTLKSRSVARF*SSSICC
Trigger: ACAGCAGATGCTAGAAGACAAGAAACGGGCCACAGA...CCGGGATTTGAGTGTAGGGAGTGTGGGAGCAGCCTTGGCAGATGGGGCACCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR CAA 90 bp TGCCAAGGCTGCTCCCACACTCCCTACACTCAAATCCCGGGTGGCAGCCATAATCCTCGATGGCTTCATTaGTGGCCTCCCAGTCTGTGG +
Preference number: 5 (lower is better)
Translates to: CQGCSHTPYTQIPGGSHNPRWLH*WPPSLW
Trigger: CCACAGACTGGGAGGCCACAAATGAAGCCATCGAGG...ATTATGGCTGCCACCCGGGATTTGAGTGTAGGGAGTGTGGGAGCAGCCTTGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR CAA 90 bp TGGCTGCCAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCTGCCTGGCTGCCAGTaGGTCTGTCTCTGTGTGCCT +
Preference number: 5 (lower is better)
Translates to: WLPVGLSLCASCLSSAPLLPGCQ*VCLCVP
Trigger: AGGCACACAGAGACAGACCAACTGGCAGCCAGGCAG...CAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTGGCAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR CAA 90 bp CAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCCGAGTCTGCCTGGCTGCCAGTaGGTCTGTCTCTGTGTGCCT +
Preference number: 5 (lower is better)
Translates to: QLVCLCVPLVYLRHPCPSLPGCQ*VCLCVP
Trigger: AGGCACACAGAGACAGACCAACTGGCAGCCAGGCAG...ACTCGGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR CAA 90 bp AGGGGCAGGGAGACTTTCCTCTGTCTGAATGTCTCTCTCCTCTGGGGCTGCCTGAAGGCTCAGACGTTCTaGGGGGTACTGGGAAGGGAA +
Preference number: 5 (lower is better)
Translates to: RGRETFLCLNVSLLWGCLKAQTF*GVLGRE
Trigger: TTCCCTTCCCAGTACCCCCAAGAACGTCTGAGCCTT...CAGGCAGCCCCAGAGGAGAGAGACATTCAGACAGAGGAAAGTCTCCCTGCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS CCA 90 bp GCAGGTAGGATTCCCGAGCCACCTGCTCCTCGATGGCTTCATTTGTaGCCTCCCAGTCTGTGGCCCGTTTCTTGTCTTCTAGCATCTGCT +
Preference number: 5 (lower is better)
Translates to: AGRIPEPPAPRWLHL*PPSLWPVSCLLASA
Trigger: AGCAGATGCTAGAAGACAAGAAACGGGCCACAGACTGGGAGGCCACAAATGAAGCCATCGAGGAGCAGGTGGCTCGGGAATCCTACCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000428668.2
ENST00000455452.5
ENST00000610466.4
CDS-3UTR CAA 90 bp CTGCCAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCCGGCGGCGGCTTCTTTTaGGGGAGTATAGTCATGGCT +
Preference number: 5 (lower is better)
Translates to: LPVGLSLCASCLSSAPLPGGGFF*GSIVMA
Trigger: AGCCATGACTATACTCCCCAAAAAGAAGCCGCCGCC...GGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000610466.4
CDS-3UTR CAA 90 bp CCATCTGCCAAGGCTGCTCCCACACTCCCTACACTCAAATCCCGGGTGGCAGCCATGATGAAGCCCTTCTaGTCTCGTAGGGCCTTTTCA +
Preference number: 5 (lower is better)
Translates to: PSAKAAPTLPTLKSRVAAMMKPF*SRRAFS
Trigger: TGAAAAGGCCCTACGAGACAAGAAGGGCTTCATCAT...GGCTGCCACCCGGGATTTGAGTGTAGGGAGTGTGGGAGCAGCCTTGGCAGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR CAA 90 bp CAGGGTTTCATTGTCCAAGCCGGCCTGACACCTGCCGCCCTGCCCTTGCCCAGTTGGTTGCCATGGCAATaGTTTTTCCGCTTCCTGTTA +
Preference number: 5 (lower is better)
Translates to: QGFIVQAGLTPAALPLPSWLPWQ*FFRFLL
Trigger: TAACAGGAAGCGGAAAAACAATTGCCATGGCAACCA...ACTGGGCAAGGGCAGGGCGGCAGGTGTCAGGCCGGCTTGGACAATGAAACCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR CAA 90 bp GATAGTGGCAGCGGCAATGAGAGAGAGTGCAGGGGTGGGCTAGCCAGAGGGAAGTCTGTGGCCCGTTTCTaGTCTTCTAGCATCTGCTGT +
Preference number: 5 (lower is better)
Translates to: DSGSGNERECRGGLARGKSVARF*SSSICC
Trigger: ACAGCAGATGCTAGAAGACAAGAAACGGGCCACAGA...CTTCCCTCTGGCTAGCCCACCCCTGCACTCTCTCTCATTGCCGCTGCCACTATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000428668.2
ENST00000610466.4
CDS-3UTR CAA 90 bp CTGCCAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCCAAGGCTCAGACGTTCTaGGGGGTACTGGGAAGGGAA +
Preference number: 5 (lower is better)
Translates to: LPVGLSLCASCLSSAPLPKAQTF*GVLGRE
Trigger: TTCCCTTCCCAGTACCCCCAAGAACGTCTGAGCCTT...GGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR CAA 90 bp ATGAGGGGCAGGGAGACTTTCCTCTGTCTGAATGTCTCTCTCCTCTGGGGCTGCAAGGCTCAGACGTTCTaGGGGGTACTGGGAAGGGAA +
Preference number: 5 (lower is better)
Translates to: MRGRETFLCLNVSLLWGCKAQTF*GVLGRE
Trigger: TTCCCTTCCCAGTACCCCCAAGAACGTCTGAGCCTT...GCAGCCCCAGAGGAGAGAGACATTCAGACAGAGGAAAGTCTCCCTGCCCCTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR CAA 90 bp TGCCAAGGCTGCTCCCACACTCCCTACACTCAAATCCCGGGTGGCAGCCATAATAAGGCTCAGACGTTCTaGGGGGTACTGGGAAGGGAA +
Preference number: 5 (lower is better)
Translates to: CQGCSHTPYTQIPGGSHNKAQTF*GVLGRE
Trigger: TTCCCTTCCCAGTACCCCCAAGAACGTCTGAGCCTT...ATTATGGCTGCCACCCGGGATTTGAGTGTAGGGAGTGTGGGAGCAGCCTTGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR CAA 90 bp AGAGGGAAGAAGCCAAAGAAGGTGAGGTGGCACCGGAGAGCAGGAGTACTGGGGCTCCAGGATTCCAACTaGAACGCTGTCAGCCGGAAT +
Preference number: 5 (lower is better)
Translates to: RGKKPKKVRWHRRAGVLGLQDSN*NAVSRN
Trigger: ATTCCGGCTGACAGCGTTCAAGTTGGAATCCTGGAG...CCCCAGTACTCCTGCTCTCCGGTGCCACCTCACCTTCTTTGGCTTCTTCCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428668.2
CDS-3UTR CAA 90 bp TGGCTGCCAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGGGCGGCGGCTTCTTTTaGGGGAGTATAGTCATGGCT +
Preference number: 5 (lower is better)
Translates to: WLPVGLSLCASCLSSAPLGGGFF*GSIVMA
Trigger: AGCCATGACTATACTCCCCAAAAAGAAGCCGCCGCC...CAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTGGCAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000610466.4
CDS-3UTR CAA 90 bp GATAGTGGCAGCGGCAATGAGAGAGAGTGCAGGGGTGGGCTAGCCAGAGGGAAGATGATGAAGCCCTTCTaGTCTCGTAGGGCCTTTTCA +
Preference number: 5 (lower is better)
Translates to: DSGSGNERECRGGLARGKMMKPF*SRRAFS
Trigger: TGAAAAGGCCCTACGAGACAAGAAGGGCTTCATCAT...CTTCCCTCTGGCTAGCCCACCCCTGCACTCTCTCTCATTGCCGCTGCCACTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000428668.2
ENST00000610466.4
CDS-3UTR CAA 90 bp ACGGGTGCCCCATCTGCCAAGGCTGCTCCCACACTCCCTACACTCAAATCCCGGTGGTTGCCATGGCAATaGTTTTTCCGCTTCCTGTTA +
Preference number: 5 (lower is better)
Translates to: TGAPSAKAAPTLPTLKSRWLPWQ*FFRFLL
Trigger: TAACAGGAAGCGGAAAAACAATTGCCATGGCAACCA...CCGGGATTTGAGTGTAGGGAGTGTGGGAGCAGCCTTGGCAGATGGGGCACCCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR CAA 90 bp GATAGTGGCAGCGGCAATGAGAGAGAGTGCAGGGGTGGGCTAGCCAGAGGGAAGGGGTTCGTCCTCGTTTaGATGTATCCCATGGAATGT +
Preference number: 5 (lower is better)
Translates to: DSGSGNERECRGGLARGKGFVLV*MYPMEC
Trigger: ACATTCCATGGGATACATCAAAACGAGGACGAACCC...CTTCCCTCTGGCTAGCCCACCCCTGCACTCTCTCTCATTGCCGCTGCCACTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000428668.2
ENST00000610466.4
CDS-3UTR CAA 90 bp TGCCTCTTGTCTATCTTCGGCACCCTTGCCCGAGTCCCTGGGGTTGGGAGATGGGGGTTCGTCCTCGTTTaGATGTATCCCATGGAATGT +
Preference number: 5 (lower is better)
Translates to: CLLSIFGTLARVPGVGRWGFVLV*MYPMEC
Trigger: ACATTCCATGGGATACATCAAAACGAGGACGAACCC...CCATCTCCCAACCCCAGGGACTCGGGCAAGGGTGCCGAAGATAGACAAGAGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396743.7
ENST00000455452.5
CDS-3UTR CAA 90 bp TGCCAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCCGGTCTCTGTGTGCCTCTaGTCTATCTTCGGCACCCTT +
Preference number: 5 (lower is better)
Translates to: CQLVCLCVPLVYLRHPCPVSVCL*SIFGTL
Trigger: AAGGGTGCCGAAGATAGACAAGAGGCACACAGAGAC...CGGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR CAA 90 bp CTGCCAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCCGTCTCTGTGTGCCTCTaGTCTATCTTCGGCACCCTT +
Preference number: 5 (lower is better)
Translates to: LPVGLSLCASCLSSAPLPVSVCL*SIFGTL
Trigger: AAGGGTGCCGAAGATAGACAAGAGGCACACAGAGAC...GGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR CAA 90 bp CAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCCGAGTAAGGCTCAGACGTTCTaGGGGGTACTGGGAAGGGAA +
Preference number: 5 (lower is better)
Translates to: QLVCLCVPLVYLRHPCPSKAQTF*GVLGRE
Trigger: TTCCCTTCCCAGTACCCCCAAGAACGTCTGAGCCTT...ACTCGGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR CAA 90 bp AGAGGGAAGAAGCCAAAGAAGGTGAGGTGGCACCGGAGAGCAGGAGTACTGGGGATGATGAAGCCCTTCTaGTCTCGTAGGGCCTTTTCA +
Preference number: 5 (lower is better)
Translates to: RGKKPKKVRWHRRAGVLGMMKPF*SRRAFS
Trigger: TGAAAAGGCCCTACGAGACAAGAAGGGCTTCATCAT...CCCCAGTACTCCTGCTCTCCGGTGCCACCTCACCTTCTTTGGCTTCTTCCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000428668.2
ENST00000610466.4
CDS-3UTR CAA 90 bp GATAGTGGCAGCGGCAATGAGAGAGAGTGCAGGGGTGGGCTAGCCAGAGGGAAGTGGTTGCCATGGCAATaGTTTTTCCGCTTCCTGTTA +
Preference number: 5 (lower is better)
Translates to: DSGSGNERECRGGLARGKWLPWQ*FFRFLL
Trigger: TAACAGGAAGCGGAAAAACAATTGCCATGGCAACCA...CTTCCCTCTGGCTAGCCCACCCCTGCACTCTCTCTCATTGCCGCTGCCACTATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000428668.2
ENST00000610466.4
CDS-3UTR CAA 90 bp CCATCTGCCAAGGCTGCTCCCACACTCCCTACACTCAAATCCCGGGTGGCAGCCTGCATCTCAATGTGGTaGCCATGGCAATTGTTTTTC +
Preference number: 5 (lower is better)
Translates to: PSAKAAPTLPTLKSRVAACISMW*PWQLFF
Trigger: GAAAAACAATTGCCATGGCAACCACATTGAGATGCA...GGCTGCCACCCGGGATTTGAGTGTAGGGAGTGTGGGAGCAGCCTTGGCAGATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
CDS-3UTR CAA 90 bp GAAGAAGCCAAAGAAGGTGAGGTGGCACCGGAGAGCAGGAGTACTGGGGTTGGGGGGTTCGTCCTCGTTTaGATGTATCCCATGGAATGT +
Preference number: 5 (lower is better)
Translates to: EEAKEGEVAPESRSTGVGGFVLV*MYPMEC
Trigger: ACATTCCATGGGATACATCAAAACGAGGACGAACCC...CCCAACCCCAGTACTCCTGCTCTCCGGTGCCACCTCACCTTCTTTGGCTTCTTC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000428668.2
ENST00000610466.4
CDS-3UTR CAA 90 bp GAAGAAGCCAAAGAAGGTGAGGTGGCACCGGAGAGCAGGAGTACTGGGGTTGGGACACCAATGGTGGCCTaGTTAGGATTCACCACTGAA +
Preference number: 5 (lower is better)
Translates to: EEAKEGEVAPESRSTGVGTPMVA*LGFTTE
Trigger: TTCAGTGGTGAATCCTAACAAGGCCACCATTGGTGT...CCCAACCCCAGTACTCCTGCTCTCCGGTGCCACCTCACCTTCTTTGGCTTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000428668.2
ENST00000610466.4
CDS-3UTR CAA 90 bp CAGCAAATCAAATACAAACTCCAGGCCCCCAGACAGACCCTGCTGGAGAGCATTCCTCGATGGCTTCATTaGTGGCCTCCCAGTCTGTGG +
Preference number: 5 (lower is better)
Translates to: QQIKYKLQAPRQTLLESIPRWLH*WPPSLW
Trigger: CCACAGACTGGGAGGCCACAAATGAAGCCATCGAGG...AATGCTCTCCAGCAGGGTCTGTCTGGGGGCCTGGAGTTTGTATTTGATTTGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR CAA 90 bp GAAGAAGCCAAAGAAGGTGAGGTGGCACCGGAGAGCAGGAGTACTGGGGTTGGGATCCCATGGAATGTGTaGATGGGTTCTGTGCTGTAC +
Preference number: 5 (lower is better)
Translates to: EEAKEGEVAPESRSTGVGIPWNV*MGSVLY
Trigger: GTACAGCACAGAACCCATCAACACATTCCATGGGAT...CCCAACCCCAGTACTCCTGCTCTCCGGTGCCACCTCACCTTCTTTGGCTTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376488.8
ENST00000428668.2
ENST00000610466.4
CDS-3UTR CAA 90 bp AGGGGCAGGGAGACTTTCCTCTGTCTGAATGTCTCTCTCCTCTGGGGCTGCCTGAGTTTATTGCTACGCTaGTTCCGGCCTTCTGCTTCA +
Preference number: 5 (lower is better)
Translates to: RGRETFLCLNVSLLWGCLSLLLR*FRPSAS
Trigger: TGAAGCAGAAGGCCGGAACAAGCGTAGCAATAAACT...CAGGCAGCCCCAGAGGAGAGAGACATTCAGACAGAGGAAAGTCTCCCTGCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610466.4
CDS-3UTR CAA 90 bp TGCCAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCCGAGTCCAGCAAGTTTATaGCTACGCTTGTTCCGGCCT +
Preference number: 5 (lower is better)
Translates to: CQLVCLCVPLVYLRHPCPSPASL*LRLFRP
Trigger: AGGCCGGAACAAGCGTAGCAATAAACTTGCTGGACT...CGGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610466.4
CDS TCA 90 bp TTAACTCAGGATGGGCAGCCTGTGGCCCGAATAGTCCAGGCGTCGTaGGATTTGGTCAAACTAAGGCGAGAAGGAAACACACTCCCTCTG +
Preference number: 5 (lower is better)
Translates to: LTQDGQPVARIVQAS*DLVKLRREGNTLPL
Trigger: CAGAGGGAGTGTGTTTCCTTCTCGCCTTAGTTTGACCAAATCTCACGACGCCTGGACTATTCGGGCCACAGGCTGCCCATCCTGAGTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481142.1
ENST00000484499.5
CDS GCA 90 bp AGAAGGAAACACACTCCCTCTGCTTCGCTTGAGGATCTTCACACATaGCGTTCCTTCTCTTCAGGACGCTCCTTCCATCCTCGTCAGCTG +
Preference number: 5 (lower is better)
Translates to: RRKHTPSASLEDLHT*RSFSSGRSFHPRQL
Trigger: CAGCTGACGAGGATGGAAGGAGCGTCCTGAAGAGAAGGAACGGCATGTGTGAAGATCCTCAAGCGAAGCAGAGGGAGTGTGTTTCCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484499.5
CDS GCA 90 bp ATGAGGCACCATCTTTCCCTCACCTACCCACTGCAGAAGTACCTGTaGTGTACTGGTACACCTCCACAGGACGGTTGTACATCTCTGCCA +
Preference number: 5 (lower is better)
Translates to: MRHHLSLTYPLQKYL*CTGTPPQDGCTSLP
Trigger: TGGCAGAGATGTACAACCGTCCTGTGGAGGTGTACCAGTACAGCACAGGTACTTCTGCAGTGGGTAGGTGAGGGAAAGATGGTGCCTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484499.5
CDS CCA 90 bp GAGCCACCTGCTCCTCGATGGCTTCATTTGTGGCCTCCCAGTCTGTaGCCCGTTTCTTGTCTTCTAGCATCTGCTGTTCAATCCATGACT +
Preference number: 5 (lower is better)
Translates to: EPPAPRWLHLWPPSL*PVSCLLASAVQSMT
Trigger: AGTCATGGATTGAACAGCAGATGCTAGAAGACAAGAAACGGGCCACAGACTGGGAGGCCACAAATGAAGCCATCGAGGAGCAGGTGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000428668.2
ENST00000455452.5
ENST00000610466.4
CDS-3UTR CAA 90 bp ATGAGGGGCAGGGAGACTTTCCTCTGTCTGAATGTCTCTCTCCTCTGGGGCTGCATGATGAAGCCCTTCTaGTCTCGTAGGGCCTTTTCA +
Preference number: 5 (lower is better)
Translates to: MRGRETFLCLNVSLLWGCMMKPF*SRRAFS
Trigger: TGAAAAGGCCCTACGAGACAAGAAGGGCTTCATCAT...GCAGCCCCAGAGGAGAGAGACATTCAGACAGAGGAAAGTCTCCCTGCCCCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR CAA 90 bp AGGGGCAGGGAGACTTTCCTCTGTCTGAATGTCTCTCTCCTCTGGGGCTGCCTGTGGTTGCCATGGCAATaGTTTTTCCGCTTCCTGTTA +
Preference number: 5 (lower is better)
Translates to: RGRETFLCLNVSLLWGCLWLPWQ*FFRFLL
Trigger: TAACAGGAAGCGGAAAAACAATTGCCATGGCAACCA...CAGGCAGCCCCAGAGGAGAGAGACATTCAGACAGAGGAAAGTCTCCCTGCCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR CAA 90 bp GATAGTGGCAGCGGCAATGAGAGAGAGTGCAGGGGTGGGCTAGCCAGAGGGAAGTGCATCTCAATGTGGTaGCCATGGCAATTGTTTTTC +
Preference number: 5 (lower is better)
Translates to: DSGSGNERECRGGLARGKCISMW*PWQLFF
Trigger: GAAAAACAATTGCCATGGCAACCACATTGAGATGCA...CTTCCCTCTGGCTAGCCCACCCCTGCACTCTCTCTCATTGCCGCTGCCACTATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000428668.2
ENST00000610466.4
CDS-3UTR CAA 90 bp TGCCAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCCGGGGTTCGTCCTCGTTTaGATGTATCCCATGGAATGT +
Preference number: 5 (lower is better)
Translates to: CQLVCLCVPLVYLRHPCPGFVLV*MYPMEC
Trigger: ACATTCCATGGGATACATCAAAACGAGGACGAACCC...CGGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR CAA 90 bp TGGCTGCCAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGTCTGTGGCCCGTTTCTaGTCTTCTAGCATCTGCTGT +
Preference number: 5 (lower is better)
Translates to: WLPVGLSLCASCLSSAPLSVARF*SSSICC
Trigger: ACAGCAGATGCTAGAAGACAAGAAACGGGCCACAGA...CAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTGGCAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR CAA 90 bp TGCCAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCCGATCCCATGGAATGTGTaGATGGGTTCTGTGCTGTAC +
Preference number: 5 (lower is better)
Translates to: CQLVCLCVPLVYLRHPCPIPWNV*MGSVLY
Trigger: GTACAGCACAGAACCCATCAACACATTCCATGGGAT...CGGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376488.8
ENST00000396743.7
ENST00000610466.4
CDS-3UTR CAA 90 bp ACAAACTCCAGGCCCCCAGACAGACCCTGCTGGAGAGCATTCACACCTCTGAGGTGCATCTCAATGTGGTaGCCATGGCAATTGTTTTTC +
Preference number: 5 (lower is better)
Translates to: TNSRPPDRPCWRAFTPLRCISMW*PWQLFF
Trigger: GAAAAACAATTGCCATGGCAACCACATTGAGATGCA...CCTCAGAGGTGTGAATGCTCTCCAGCAGGGTCTGTCTGGGGGCCTGGAGTTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR CAA 90 bp AGGGGCAGGGAGACTTTCCTCTGTCTGAATGTCTCTCTCCTCTGGGGCTGCCTGTGCATCTCAATGTGGTaGCCATGGCAATTGTTTTTC +
Preference number: 5 (lower is better)
Translates to: RGRETFLCLNVSLLWGCLCISMW*PWQLFF
Trigger: GAAAAACAATTGCCATGGCAACCACATTGAGATGCA...CAGGCAGCCCCAGAGGAGAGAGACATTCAGACAGAGGAAAGTCTCCCTGCCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR CAA 90 bp CAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGCCCGAGTGGGTTCGTCCTCGTTTaGATGTATCCCATGGAATGT +
Preference number: 5 (lower is better)
Translates to: QLVCLCVPLVYLRHPCPSGFVLV*MYPMEC
Trigger: ACATTCCATGGGATACATCAAAACGAGGACGAACCC...ACTCGGGCAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR CAA 90 bp AATACAAACTCCAGGCCCCCAGACAGACCCTGCTGGAGAGCATTCACACCTCTGGGGTTCGTCCTCGTTTaGATGTATCCCATGGAATGT +
Preference number: 5 (lower is better)
Translates to: NTNSRPPDRPCWRAFTPLGFVLV*MYPMEC
Trigger: ACATTCCATGGGATACATCAAAACGAGGACGAACCC...CAGAGGTGTGAATGCTCTCCAGCAGGGTCTGTCTGGGGGCCTGGAGTTTGTATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR CAA 90 bp TGGCTGCCAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGACACCAATGGTGGCCTaGTTAGGATTCACCACTGAA +
Preference number: 5 (lower is better)
Translates to: WLPVGLSLCASCLSSAPLTPMVA*LGFTTE
Trigger: TTCAGTGGTGAATCCTAACAAGGCCACCATTGGTGT...CAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTGGCAGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR CAA 90 bp AATACAAACTCCAGGCCCCCAGACAGACCCTGCTGGAGAGCATTCACACCTCTGATCCCATGGAATGTGTaGATGGGTTCTGTGCTGTAC +
Preference number: 5 (lower is better)
Translates to: NTNSRPPDRPCWRAFTPLIPWNV*MGSVLY
Trigger: GTACAGCACAGAACCCATCAACACATTCCATGGGAT...CAGAGGTGTGAATGCTCTCCAGCAGGGTCTGTCTGGGGGCCTGGAGTTTGTATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS GCA 90 bp TACTGGTACACCTCCACAGGACGGTTGTACATCTCTGCCATGGCCTaGATCTCAATGTGGTTGCCATGGCAATTGTTTTTCCGCTTCCTG +
Preference number: 5 (lower is better)
Translates to: YWYTSTGRLYISAMA*ISMWLPWQLFFRFL
Trigger: CAGGAAGCGGAAAAACAATTGCCATGGCAACCACATTGAGATGCAGGCCATGGCAGAGATGTACAACCGTCCTGTGGAGGTGTACCAGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000428668.2
ENST00000455452.5
ENST00000481142.1
ENST00000484499.5
ENST00000610466.4
CDS CCA 90 bp TGCTGTACTGGTACACCTCCACAGGACGGTTGTACATCTCTGCCATaGCCTGCATCTCAATGTGGTTGCCATGGCAATTGTTTTTCCGCT +
Preference number: 5 (lower is better)
Translates to: CCTGTPPQDGCTSLP*PASQCGCHGNCFSA
Trigger: AGCGGAAAAACAATTGCCATGGCAACCACATTGAGATGCAGGCCATGGCAGAGATGTACAACCGTCCTGTGGAGGTGTACCAGTACAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000428668.2
ENST00000455452.5
ENST00000481142.1
ENST00000484499.5
ENST00000610466.4
CDS-3UTR CAA 90 bp TGGCTGCCAGTTGGTCTGTCTCTGTGTGCCTCTTGTCTATCTTCGGCACCCTTGTGGTTGCCATGGCAATaGTTTTTCCGCTTCCTGTTA +
Preference number: 5 (lower is better)
Translates to: WLPVGLSLCASCLSSAPLWLPWQ*FFRFLL
Trigger: TAACAGGAAGCGGAAAAACAATTGCCATGGCAACCA...CAAGGGTGCCGAAGATAGACAAGAGGCACACAGAGACAGACCAACTGGCAGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR CAA 90 bp ATGAGGGGCAGGGAGACTTTCCTCTGTCTGAATGTCTCTCTCCTCTGGGGCTGCTGCATCTCAATGTGGTaGCCATGGCAATTGTTTTTC +
Preference number: 5 (lower is better)
Translates to: MRGRETFLCLNVSLLWGCCISMW*PWQLFF
Trigger: GAAAAACAATTGCCATGGCAACCACATTGAGATGCA...GCAGCCCCAGAGGAGAGAGACATTCAGACAGAGGAAAGTCTCCCTGCCCCTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS-3UTR CAA 90 bp GAACAGAGTCGCTCAGGGAAACTGACATTTGGTTTTATTGTGCCAAGGACATTACCAAGGTCCGTGCCATaGCATCCTCTGCCCAGAGGC +
Preference number: 5 (lower is better)
Translates to: EQSRSGKLTFGFIVPRTLPRSVP*HPLPRG
Trigger: GCCTCTGGGCAGAGGATGCAATGGCACGGACCTTGG...TAATGTCCTTGGCACAATAAAACCAAATGTCAGTTTCCCTGAGCGACTCTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS TCA 90 bp CAGGCCCAGCCCCACACCAATGGTGGCCTTGTTAGGATTCACCACTaGATTATAGTGGATATTCCGATGGTAGCTAACACGAATGGGTTC +
Preference number: 5 (lower is better)
Translates to: QAQPHTNGGLVRIHH*IIVDIPMVANTNGF
Trigger: GAACCCATTCGTGTTAGCTACCATCGGAATATCCACTATAATTCAGTGGTGAATCCTAACAAGGCCACCATTGGTGTGGGGCTGGGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000428668.2
ENST00000455452.5
ENST00000484499.5
ENST00000610466.4
CDS GCA 90 bp ACCTGTGCTGTACTGGTACACCTCCACAGGACGGTTGTACATCTCTaGCATGGCCTGCATCTCAATGTGGTTGCCATGGCAATTGTTTTT +
Preference number: 5 (lower is better)
Translates to: TCAVLVHLHRTVVHL*HGLHLNVVAMAIVF
Trigger: AAAAACAATTGCCATGGCAACCACATTGAGATGCAGGCCATGGCAGAGATGTACAACCGTCCTGTGGAGGTGTACCAGTACAGCACAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156084.8
ENST00000455452.5
ENST00000484499.5
CDS-3UTR CAA 90 bp ACAGAACAGAGTCGCTCAGGGAAACTGACATTTGGTTTTATTGTGCCAAGGACACCTCGATGGCTTCATTaGTGGCCTCCCAGTCTGTGG +
Preference number: 5 (lower is better)
Translates to: TEQSRSGKLTFGFIVPRTPRWLH*WPPSLW
Trigger: CCACAGACTGGGAGGCCACAAATGAAGCCATCGAGG...TGTCCTTGGCACAATAAAACCAAATGTCAGTTTCCCTGAGCGACTCTGTTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS GCA 90 bp TTCTGTGCTGTACTGGTACACCTCCACAGGACGGTTGTACATCTCTaGCATGGCCTGCATCTCAATGTGGTTGCCATGGCAATTGTTTTT +
Preference number: 5 (lower is better)
Translates to: FCAVLVHLHRTVVHL*HGLHLNVVAMAIVF
Trigger: AAAAACAATTGCCATGGCAACCACATTGAGATGCAGGCCATGGCAGAGATGTACAACCGTCCTGTGGAGGTGTACCAGTACAGCACAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376488.8
ENST00000396743.7
ENST00000428668.2
ENST00000481142.1
ENST00000610466.4
CDS GCA 90 bp TTTGTGGCCTCCCAGTCTGTGGCCCGTTTCTTGTCTTCTAGCATCTaGTGTTCAATCCATGACTCCTCCGATGTTTTTATGGCATTCTTC +
Preference number: 5 (lower is better)
Translates to: FVASQSVARFLSSSI*CSIHDSSDVFMAFF
Trigger: GAAGAATGCCATAAAAACATCGGAGGAGTCATGGATTGAACAGCAGATGCTAGAAGACAAGAAACGGGCCACAGACTGGGAGGCCACAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000428668.2
ENST00000455452.5
ENST00000484499.5
ENST00000610466.4
CDS-3UTR CAA 90 bp TTTAATAAGCAGCAAATCAAATACAAACTCCAGGCCCCCAGACAGACCCTGCTGATGATGAAGCCCTTCTaGTCTCGTAGGGCCTTTTCA +
Preference number: 5 (lower is better)
Translates to: FNKQQIKYKLQAPRQTLLMMKPF*SRRAFS
Trigger: TGAAAAGGCCCTACGAGACAAGAAGGGCTTCATCAT...CAGCAGGGTCTGTCTGGGGGCCTGGAGTTTGTATTTGATTTGCTGCTTATTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR CAA 90 bp TTTAATAAGCAGCAAATCAAATACAAACTCCAGGCCCCCAGACAGACCCTGCTGACACCAATGGTGGCCTaGTTAGGATTCACCACTGAA +
Preference number: 5 (lower is better)
Translates to: FNKQQIKYKLQAPRQTLLTPMVA*LGFTTE
Trigger: TTCAGTGGTGAATCCTAACAAGGCCACCATTGGTGT...CAGCAGGGTCTGTCTGGGGGCCTGGAGTTTGTATTTGATTTGCTGCTTATTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR CAA 90 bp ACAGAACAGAGTCGCTCAGGGAAACTGACATTTGGTTTTATTGTGCCAAGGACAATGATGAAGCCCTTCTaGTCTCGTAGGGCCTTTTCA +
Preference number: 5 (lower is better)
Translates to: TEQSRSGKLTFGFIVPRTMMKPF*SRRAFS
Trigger: TGAAAAGGCCCTACGAGACAAGAAGGGCTTCATCAT...TGTCCTTGGCACAATAAAACCAAATGTCAGTTTCCCTGAGCGACTCTGTTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS-3UTR CAA 90 bp TTTAATAAGCAGCAAATCAAATACAAACTCCAGGCCCCCAGACAGACCCTGCTGTGGTTGCCATGGCAATaGTTTTTCCGCTTCCTGTTA +
Preference number: 5 (lower is better)
Translates to: FNKQQIKYKLQAPRQTLLWLPWQ*FFRFLL
Trigger: TAACAGGAAGCGGAAAAACAATTGCCATGGCAACCA...CAGCAGGGTCTGTCTGGGGGCCTGGAGTTTGTATTTGATTTGCTGCTTATTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376488.8
ENST00000396743.7
CDS CAA 90 bp GCCGCCGGGACCACCTGGGCCCCCGCAAGGAGGTGGAGAAGCCTGTaGTGGCCGGGGACCCGCCACTGCACCAGGCGGCACGGCCAGCGC +
Preference number: 6 (lower is better)
Translates to: AAGTTWAPARRWRSL*WPGTRHCTRRHGQR
Trigger: GCGCTGGCCGTGCCGCCTGGTGCAGTGGCGGGTCCCCGGCCACAACAGGCTTCTCCACCTCCTTGCGGGGGCCCAGGTGGTCCCGGCGGC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000610466.4
CDS TCA 72 bp GGACTGCCCCCGCCAACCGCGCCAACCCCGGGAGCTTaGCGTCGCCGCTTGCTGTGCCCAGGCCCGGAGCAG +
Preference number: 6 (lower is better)
Translates to: GLPPPTAPTPGA*RRRLLCPGPEQ
Trigger: CTGCTCCGGGCCTGGGCACAGCAAGCGGCGACGTCAAGCTCCCGGGGTTGGCGCGGTTGGCGGGGGCAGTCC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS CCA 72 bp ACCGCCGCCGGGACCACCTGGGCCCCCGCAAGGAGGTaGAGAAGCCTGTTGTGGCCGGGGACCCGCCACTGC +
Preference number: 6 (lower is better)
Translates to: TAAGTTWAPARR*RSLLWPGTRHC
Trigger: GCAGTGGCGGGTCCCCGGCCACAACAGGCTTCTCCACCTCCTTGCGGGGGCCCAGGTGGTCCCGGCGGCGGT
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000610466.4
CDS CAA 72 bp GGGACTGCCCCCGCCAACCGCGCCAACCCCGGGAGCTaGACGTCGCCGCTTGCTGTGCCCAGGCCCGGAGCA +
Preference number: 6 (lower is better)
Translates to: GTAPANRANPGS*TSPLAVPRPGA
Trigger: TGCTCCGGGCCTGGGCACAGCAAGCGGCGACGTCAAGCTCCCGGGGTTGGCGCGGTTGGCGGGGGCAGTCCC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS CCA 72 bp ACCTGGGCCCCCGCAAGGAGGTGGAGAAGCCTGTTGTaGCCGGGGACCCGCCACTGCACCAGGCGGCACGGC +
Preference number: 6 (lower is better)
Translates to: TWAPARRWRSLL*PGTRHCTRRHG
Trigger: GCCGTGCCGCCTGGTGCAGTGGCGGGTCCCCGGCCACAACAGGCTTCTCCACCTCCTTGCGGGGGCCCAGGT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000610466.4
CDS CAA 72 bp ACCACCTGGGCCCCCGCAAGGAGGTGGAGAAGCCTGTaGTGGCCGGGGACCCGCCACTGCACCAGGCGGCAC +
Preference number: 6 (lower is better)
Translates to: TTWAPARRWRSL*WPGTRHCTRRH
Trigger: GTGCCGCCTGGTGCAGTGGCGGGTCCCCGGCCACAACAGGCTTCTCCACCTCCTTGCGGGGGCCCAGGTGGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000610466.4
CDS GCA 72 bp AGGTGGAGAAGCCTGTTGTGGCCGGGGACCCGCCACTaGACCAGGCGGCACGGCCAGCGCCCAGCGATGAAG +
Preference number: 6 (lower is better)
Translates to: RWRSLLWPGTRH*TRRHGQRPAMK
Trigger: CTTCATCGCTGGGCGCTGGCCGTGCCGCCTGGTGCAGTGGCGGGTCCCCGGCCACAACAGGCTTCTCCACCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000610466.4
CDS GCA 72 bp TGTTGTAGCCTGCGCCGACCTCCTCACGCTCGGGACTaGCCCCGCCAACCGCGCCAACCCCGGGAGCTTGAC +
Preference number: 6 (lower is better)
Translates to: CCSLRRPPHARD*PRQPRQPRELD
Trigger: GTCAAGCTCCCGGGGTTGGCGCGGTTGGCGGGGGCAGTCCCGAGCGTGAGGAGGTCGGCGCAGGCTACAACA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS GCA 72 bp TGCAGCCGCCTCATACTCGTCCTCACTGTTGTAGCCTaGGCCGACCTCCTCACGCTCGGGACTGCCCCCGCC +
Preference number: 6 (lower is better)
Translates to: CSRLILVLTVVA*ADLLTLGTAPA
Trigger: GGCGGGGGCAGTCCCGAGCGTGAGGAGGTCGGCGCAGGCTACAACAGTGAGGACGAGTATGAGGCGGCTGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS GCA 72 bp CCGGCTAGTCCACTCCTCCAGGCCACTGGAGGCTGCTaGTGTGGCCGAACTGCATGTGGCGCTGGCTTTCCG +
Preference number: 6 (lower is better)
Translates to: PASPLLQATGGC*CGRTACGAGFP
Trigger: CGGAAAGCCAGCGCCACATGCAGTTCGGCCACAGCAGCAGCCTCCAGTGGCCTGGAGGAGTGGACTAGCCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000428668.2
ENST00000455452.5
ENST00000610466.4
CDS GCA 72 bp GGACCGGCTAGTCCACTCCTCCAGGCCACTGGAGGCTaGTGCTGTGGCCGAACTGCATGTGGCGCTGGCTTT +
Preference number: 6 (lower is better)
Translates to: GPASPLLQATGG*CCGRTACGAGF
Trigger: AAAGCCAGCGCCACATGCAGTTCGGCCACAGCAGCAGCCTCCAGTGGCCTGGAGGAGTGGACTAGCCGGTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000428668.2
ENST00000455452.5
ENST00000610466.4
CDS CCA 72 bp TCCTGCTGCAGGCGTCGGTACTGCGGACGGACAGCGTaGCCTGTCCCACGTACGACAGGAAAAACACCTCCC +
Preference number: 6 (lower is better)
Translates to: SCCRRRYCGRTA*PVPRTTGKTPP
Trigger: GGGAGGTGTTTTTCCTGTCGTACGTGGGACAGGCCACGCTGTCCGTCCGCAGTACCGACGCCTGCAGCAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428668.2
CDS GCA 72 bp CTCGACAGTGGCAGGGTCCATAGCCTCGATGCGTGCTaGAGCCGCCTCATACTCGTCCTCACTGTTGTAGCC +
Preference number: 6 (lower is better)
Translates to: LDSGRVHSLDAC*SRLILVLTVVA
Trigger: GGCTACAACAGTGAGGACGAGTATGAGGCGGCTGCAGCACGCATCGAGGCTATGGACCCTGCCACTGTCGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS GCA 72 bp GTCGACAGTGGCAGGGTCCATAGCCTCGATGCGTGCTaGAGCCGCCTCATACTCGTCCTCACTGTTGTAGCC +
Preference number: 6 (lower is better)
Translates to: VDSGRVHSLDAC*SRLILVLTVVA
Trigger: GGCTACAACAGTGAGGACGAGTATGAGGCGGCTGCAGCACGCATCGAGGCTATGGACCCTGCCACTGTCGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484499.5
CDS GCA 72 bp CTGCTCGACAGTGGCAGGGTCCATAGCCTCGATGCGTaGTGCAGCCGCCTCATACTCGTCCTCACTGTTGTA +
Preference number: 6 (lower is better)
Translates to: LLDSGRVHSLDA*CSRLILVLTVV
Trigger: TACAACAGTGAGGACGAGTATGAGGCGGCTGCAGCACGCATCGAGGCTATGGACCCTGCCACTGTCGAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS GCA 72 bp CCTGTCGACAGTGGCAGGGTCCATAGCCTCGATGCGTaGTGCAGCCGCCTCATACTCGTCCTCACTGTTGTA +
Preference number: 6 (lower is better)
Translates to: PVDSGRVHSLDA*CSRLILVLTVV
Trigger: TACAACAGTGAGGACGAGTATGAGGCGGCTGCAGCACGCATCGAGGCTATGGACCCTGCCACTGTCGACAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484499.5
CDS CAA 90 bp ACTGCAGGTAGGATTCCCGAGCCACCTGCTCCTCGATGGCTTCATTaGTGGCCTCCCAGTCTGTGGCCCGTTTCTTGTCTTCTAGCATCT +
Preference number: 6 (lower is better)
Translates to: TAGRIPEPPAPRWLH*WPPSLWPVSCLLAS
Trigger: AGATGCTAGAAGACAAGAAACGGGCCACAGACTGGGAGGCCACAAATGAAGCCATCGAGGAGCAGGTGGCTCGGGAATCCTACCTGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000428668.2
ENST00000455452.5
ENST00000610466.4
CDS CCA 72 bp ATTCCCGAGCCACCTGCTCCTCGATGGCTTCATTTGTaGCCTCCCAGTCTGTGGCCCGTTTCTTGTCTTCTA +
Preference number: 6 (lower is better)
Translates to: IPEPPAPRWLHL*PPSLWPVSCLL
Trigger: TAGAAGACAAGAAACGGGCCACAGACTGGGAGGCCACAAATGAAGCCATCGAGGAGCAGGTGGCTCGGGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000428668.2
ENST00000455452.5
ENST00000610466.4
CDS TCA 72 bp GATGGGCAGCCTGTGGCCCGAATAGTCCAGGCGTCGTaGGATTTGGTCAAACTAAGGCGAGAAGGAAACACA +
Preference number: 6 (lower is better)
Translates to: DGQPVARIVQAS*DLVKLRREGNT
Trigger: TGTGTTTCCTTCTCGCCTTAGTTTGACCAAATCTCACGACGCCTGGACTATTCGGGCCACAGGCTGCCCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481142.1
ENST00000484499.5
CDS GCA 72 bp GTACTGGTACACCTCCACAGGACGGTTGTACATCTCTaGCATGGCCTGCATCTCAATGTGGTTGCCATGGCA +
Preference number: 6 (lower is better)
Translates to: VLVHLHRTVVHL*HGLHLNVVAMA
Trigger: TGCCATGGCAACCACATTGAGATGCAGGCCATGGCAGAGATGTACAACCGTCCTGTGGAGGTGTACCAGTAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000428668.2
ENST00000455452.5
ENST00000481142.1
ENST00000484499.5
ENST00000610466.4
CDS GCA 72 bp CACACTCCCTCTGCTTCGCTTGAGGATCTTCACACATaGCGTTCCTTCTCTTCAGGACGCTCCTTCCATCCT +
Preference number: 6 (lower is better)
Translates to: HTPSASLEDLHT*RSFSSGRSFHP
Trigger: AGGATGGAAGGAGCGTCCTGAAGAGAAGGAACGGCATGTGTGAAGATCCTCAAGCGAAGCAGAGGGAGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484499.5
CDS CCA 72 bp TCCATGCAATGCTTTCGCACAACCTCATGCATGTCCTaGTCTCCATACACCTGGTCAGCTACAGCCCGGAAG +
Preference number: 6 (lower is better)
Translates to: SMQCFRTTSCMS*SPYTWSATARK
Trigger: CTTCCGGGCTGTAGCTGACCAGGTGTATGGAGACCAGGACATGCATGAGGTTGTGCGAAAGCATTGCATGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000428668.2
ENST00000455452.5
ENST00000610466.4
CDS CAA 72 bp GTACCTGTGCTGTACTGGTACACCTCCACAGGACGGTaGTACATCTCTGCCATGGCCTGCATCTCAATGTGG +
Preference number: 6 (lower is better)
Translates to: VPVLYWYTSTGR*YISAMACISMW
Trigger: CCACATTGAGATGCAGGCCATGGCAGAGATGTACAACCGTCCTGTGGAGGTGTACCAGTACAGCACAGGTAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156084.8
ENST00000455452.5
ENST00000484499.5
CDS CAA 72 bp GGTTCTGTGCTGTACTGGTACACCTCCACAGGACGGTaGTACATCTCTGCCATGGCCTGCATCTCAATGTGG +
Preference number: 6 (lower is better)
Translates to: GSVLYWYTSTGR*YISAMACISMW
Trigger: CCACATTGAGATGCAGGCCATGGCAGAGATGTACAACCGTCCTGTGGAGGTGTACCAGTACAGCACAGAACC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376488.8
ENST00000396743.7
ENST00000428668.2
ENST00000481142.1
ENST00000610466.4
CDS CAA 90 bp ACTGCAGAAGTACCTGTGCTGTACTGGTACACCTCCACAGGACGGTaGTACATCTCTGCCATGGCCTGCATCTCAATGTGGTTGCCATGG +
Preference number: 6 (lower is better)
Translates to: TAEVPVLYWYTSTGR*YISAMACISMWLPW
Trigger: CCATGGCAACCACATTGAGATGCAGGCCATGGCAGAGATGTACAACCGTCCTGTGGAGGTGTACCAGTACAGCACAGGTACTTCTGCAGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156084.8
ENST00000455452.5
ENST00000484499.5
CDS CAA 90 bp GTGTTGATGGGTTCTGTGCTGTACTGGTACACCTCCACAGGACGGTaGTACATCTCTGCCATGGCCTGCATCTCAATGTGGTTGCCATGG +
Preference number: 6 (lower is better)
Translates to: VLMGSVLYWYTSTGR*YISAMACISMWLPW
Trigger: CCATGGCAACCACATTGAGATGCAGGCCATGGCAGAGATGTACAACCGTCCTGTGGAGGTGTACCAGTACAGCACAGAACCCATCAACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376488.8
ENST00000396743.7
ENST00000428668.2
ENST00000481142.1
ENST00000610466.4
CDS CAA 90 bp AGACAGGCGCCATCCTCCTTCATCTGCTTGATGATGAAGCCCTTCTaGTCTCGTAGGGCCTTTTCAAACCAATGCTCCTGCTGCAGGCGT +
Preference number: 6 (lower is better)
Translates to: RQAPSSFICLMMKPF*SRRAFSNQCSCCRR
Trigger: ACGCCTGCAGCAGGAGCATTGGTTTGAAAAGGCCCTACGAGACAAGAAGGGCTTCATCATCAAGCAGATGAAGGAGGATGGCGCCTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428668.2
CDS TCA 72 bp CCTCCAGGATTCCAACTTGAACGCTGTCAGCCGGAATaGCTGGAAAACATCAACACTCCCGGGAGCATAGCT +
Preference number: 6 (lower is better)
Translates to: PPGFQLERCQPE*LENINTPGSIA
Trigger: AGCTATGCTCCCGGGAGTGTTGATGTTTTCCAGTCATTCCGGCTGACAGCGTTCAAGTTGGAATCCTGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428668.2
CDS CCA 72 bp GGTACACCTCCACAGGACGGTTGTACATCTCTGCCATaGCCTGCATCTCAATGTGGTTGCCATGGCAATTGT +
Preference number: 6 (lower is better)
Translates to: GTPPQDGCTSLP*PASQCGCHGNC
Trigger: ACAATTGCCATGGCAACCACATTGAGATGCAGGCCATGGCAGAGATGTACAACCGTCCTGTGGAGGTGTACC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000428668.2
ENST00000455452.5
ENST00000481142.1
ENST00000484499.5
ENST00000610466.4
CDS CCA 72 bp GCTCCTCGATGGCTTCATTTGTGGCCTCCCAGTCTGTaGCCCGTTTCTTGTCTTCTAGCATCTGCTGTTCAA +
Preference number: 6 (lower is better)
Translates to: APRWLHLWPPSL*PVSCLLASAVQ
Trigger: TTGAACAGCAGATGCTAGAAGACAAGAAACGGGCCACAGACTGGGAGGCCACAAATGAAGCCATCGAGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000428668.2
ENST00000455452.5
ENST00000610466.4
CDS CAA 90 bp AGACAGGCGCCATCCTCCTTCATCTGCTTGATGATGAAGCCCTTCTaGTCTCGTAGGGCCTTTTCAAACCAATGCTCCTGCTGCTCGACA +
Preference number: 6 (lower is better)
Translates to: RQAPSSFICLMMKPF*SRRAFSNQCSCCST
Trigger: TGTCGAGCAGCAGGAGCATTGGTTTGAAAAGGCCCTACGAGACAAGAAGGGCTTCATCATCAAGCAGATGAAGGAGGATGGCGCCTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000455452.5
ENST00000610466.4
CDS CAA 90 bp AGACAGGCGCCATCCTCCTTCATCTGCTTGATGATGAAGCCCTTCTaGTCTCGTAGGGCCTTTTCAAACCAATGCTCCTGTCGACAGTGG +
Preference number: 6 (lower is better)
Translates to: RQAPSSFICLMMKPF*SRRAFSNQCSCRQW
Trigger: CCACTGTCGACAGGAGCATTGGTTTGAAAAGGCCCTACGAGACAAGAAGGGCTTCATCATCAAGCAGATGAAGGAGGATGGCGCCTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484499.5
CDS CAA 90 bp TCCTCGATGGCTTCATTTGTGGCCTCCCAGTCTGTGGCCCGTTTCTaGTCTTCTAGCATCTGCTGTTCAATCCATGACTCCTCCGATGTT +
Preference number: 6 (lower is better)
Translates to: SSMASFVASQSVARF*SSSICCSIHDSSDV
Trigger: AACATCGGAGGAGTCATGGATTGAACAGCAGATGCTAGAAGACAAGAAACGGGCCACAGACTGGGAGGCCACAAATGAAGCCATCGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000428668.2
ENST00000455452.5
ENST00000610466.4
CDS CAA 72 bp GCTTCATTTGTGGCCTCCCAGTCTGTGGCCCGTTTCTaGTCTTCTAGCATCTGCTGTTCAATCCATGACTCC +
Preference number: 6 (lower is better)
Translates to: ASFVASQSVARF*SSSICCSIHDS
Trigger: GGAGTCATGGATTGAACAGCAGATGCTAGAAGACAAGAAACGGGCCACAGACTGGGAGGCCACAAATGAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000428668.2
ENST00000455452.5
ENST00000484499.5
ENST00000610466.4
CDS GCA 72 bp ACCTCCACAGGACGGTTGTACATCTCTGCCATGGCCTaGATCTCAATGTGGTTGCCATGGCAATTGTTTTTC +
Preference number: 6 (lower is better)
Translates to: TSTGRLYISAMA*ISMWLPWQLFF
Trigger: GAAAAACAATTGCCATGGCAACCACATTGAGATGCAGGCCATGGCAGAGATGTACAACCGTCCTGTGGAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000428668.2
ENST00000455452.5
ENST00000481142.1
ENST00000484499.5
ENST00000610466.4
CDS CAA 72 bp CCATCCTCCTTCATCTGCTTGATGATGAAGCCCTTCTaGTCTCGTAGGGCCTTTTCAAACCAATGCTCCTGC +
Preference number: 6 (lower is better)
Translates to: PSSFICLMMKPF*SRRAFSNQCSC
Trigger: GCAGGAGCATTGGTTTGAAAAGGCCCTACGAGACAAGAAGGGCTTCATCATCAAGCAGATGAAGGAGGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000428668.2
ENST00000455452.5
ENST00000610466.4
CDS CCA 72 bp CGGTTGTACATCTCTGCCATGGCCTGCATCTCAATGTaGTTGCCATGGCAATTGTTTTTCCGCTTCCTGTTA +
Preference number: 6 (lower is better)
Translates to: RLYISAMACISM*LPWQLFFRFLL
Trigger: TAACAGGAAGCGGAAAAACAATTGCCATGGCAACCACATTGAGATGCAGGCCATGGCAGAGATGTACAACCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000428668.2
ENST00000455452.5
ENST00000481142.1
ENST00000484499.5
ENST00000610466.4
CDS CAA 72 bp CCGATGGTAGCTAACACGAATGGGTTCGTCCTCGTTTaGATGTATCCCATGGAATGTGTTGATGGGTTCCAC +
Preference number: 6 (lower is better)
Translates to: PMVANTNGFVLV*MYPMECVDGFH
Trigger: GTGGAACCCATCAACACATTCCATGGGATACATCAAAACGAGGACGAACCCATTCGTGTTAGCTACCATCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156084.8
ENST00000455452.5
CDS CAA 72 bp CCATCCTCCTTCATCTGCTTGATGATGAAGCCCTTCTaGTCTCGTAGGGCCTTTTCAAACCAATGCTCCTGT +
Preference number: 6 (lower is better)
Translates to: PSSFICLMMKPF*SRRAFSNQCSC
Trigger: ACAGGAGCATTGGTTTGAAAAGGCCCTACGAGACAAGAAGGGCTTCATCATCAAGCAGATGAAGGAGGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484499.5
CDS CAA 72 bp CCGATGGTAGCTAACACGAATGGGTTCGTCCTCGTTTaGATGTATCCCATGGAATGTGTTGATGGGTTCTGC +
Preference number: 6 (lower is better)
Translates to: PMVANTNGFVLV*MYPMECVDGFC
Trigger: GCAGAACCCATCAACACATTCCATGGGATACATCAAAACGAGGACGAACCCATTCGTGTTAGCTACCATCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484499.5
CDS CAA 90 bp GTGGATATTCCGATGGTAGCTAACACGAATGGGTTCGTCCTCGTTTaGATGTATCCCATGGAATGTGTTGATGGGTTCCACTGCAGAAGT +
Preference number: 6 (lower is better)
Translates to: VDIPMVANTNGFVLV*MYPMECVDGFHCRS
Trigger: ACTTCTGCAGTGGAACCCATCAACACATTCCATGGGATACATCAAAACGAGGACGAACCCATTCGTGTTAGCTACCATCGGAATATCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156084.8
ENST00000455452.5
CDS CAA 90 bp GTGGATATTCCGATGGTAGCTAACACGAATGGGTTCGTCCTCGTTTaGATGTATCCCATGGAATGTGTTGATGGGTTCTGTGCTGTACTG +
Preference number: 6 (lower is better)
Translates to: VDIPMVANTNGFVLV*MYPMECVDGFCAVL
Trigger: CAGTACAGCACAGAACCCATCAACACATTCCATGGGATACATCAAAACGAGGACGAACCCATTCGTGTTAGCTACCATCGGAATATCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376488.8
ENST00000396743.7
ENST00000428668.2
ENST00000610466.4
CDS TCA 72 bp CCCCACACCAATGGTGGCCTTGTTAGGATTCACCACTaGATTATAGTGGATATTCCGATGGTAGCTAACACG +
Preference number: 6 (lower is better)
Translates to: PHTNGGLVRIHH*IIVDIPMVANT
Trigger: CGTGTTAGCTACCATCGGAATATCCACTATAATTCAGTGGTGAATCCTAACAAGGCCACCATTGGTGTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000428668.2
ENST00000455452.5
ENST00000484499.5
ENST00000610466.4
CDS GCA 72 bp TCCCAGTCTGTGGCCCGTTTCTTGTCTTCTAGCATCTaGTGTTCAATCCATGACTCCTCCGATGTTTTTATG +
Preference number: 6 (lower is better)
Translates to: SQSVARFLSSSI*CSIHDSSDVFM
Trigger: CATAAAAACATCGGAGGAGTCATGGATTGAACAGCAGATGCTAGAAGACAAGAAACGGGCCACAGACTGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000428668.2
ENST00000455452.5
ENST00000484499.5
ENST00000610466.4
CDS CAA 72 bp CCGATGGTAGCTAACACGAATGGGTTCGTCCTCGTTTaGATGTATCCCATGGAATGTGTTGATGGGTTCTGT +
Preference number: 6 (lower is better)
Translates to: PMVANTNGFVLV*MYPMECVDGFC
Trigger: ACAGAACCCATCAACACATTCCATGGGATACATCAAAACGAGGACGAACCCATTCGTGTTAGCTACCATCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376488.8
ENST00000396743.7
ENST00000428668.2
ENST00000610466.4
CDS CAA 90 bp GTGGATATTCCGATGGTAGCTAACACGAATGGGTTCGTCCTCGTTTaGATGTATCCCATGGAATGTGTTGATGGGTTCTGCAGAGAAAGA +
Preference number: 6 (lower is better)
Translates to: VDIPMVANTNGFVLV*MYPMECVDGFCRER
Trigger: TCTTTCTCTGCAGAACCCATCAACACATTCCATGGGATACATCAAAACGAGGACGAACCCATTCGTGTTAGCTACCATCGGAATATCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484499.5
CDS CCA 72 bp TCTGCTGTTCAATCCATGACTCCTCCGATGTTTTTATaGCATTCTTCATCAGAGACTGCTCTGCAAACCCTG +
Preference number: 6 (lower is better)
Translates to: SAVQSMTPPMFL*HSSSETALQTL
Trigger: CAGGGTTTGCAGAGCAGTCTCTGATGAAGAATGCCATAAAAACATCGGAGGAGTCATGGATTGAACAGCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000428668.2
ENST00000455452.5
ENST00000484499.5
ENST00000610466.4
CDS CAA 72 bp TTGTACATCTCTGCCATGGCCTGCATCTCAATGTGGTaGCCATGGCAATTGTTTTTCCGCTTCCTGTTAATG +
Preference number: 6 (lower is better)
Translates to: LYISAMACISMW*PWQLFFRFLLM
Trigger: CATTAACAGGAAGCGGAAAAACAATTGCCATGGCAACCACATTGAGATGCAGGCCATGGCAGAGATGTACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000156084.8
ENST00000376488.8
ENST00000396743.7
ENST00000428668.2
ENST00000455452.5
ENST00000481142.1
ENST00000484499.5
ENST00000610466.4