RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OTUD3 (Homo sapiens)

Ensembl gene IDs: ENSG00000169914

Ensembl transcript IDs: ENST00000375120.4, ENST00000466697.1, ENST00000481686.1

Found 283 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGTCATGGATGGCTGGCAGCCTGCCGCAGGCTGACACGCCAAGGATaGGAGCCAGGCCACAGAGAGTCTGTCCGGCAATCGCCGCCAGCC +
Preference number: 1 (lower is better)
Translates to: CHGWLAACRRLTRQG*EPGHRESVRQSPPA
Trigger: GGCTGGCGGCGATTGCCGGACAGACTCTCTGTGGCCTGGCTCTCATCCTTGGCGTGTCAGCCTGCGGCAGGCTGCCAGCCATCCATGACA
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR TCA 90 bp TCGAGGGACCTGCCAGGGATCAAACCGCCAGCTGAGGTCTGTGGCTaGGCTCACATGATTGTCATGGATGGCTGGCAGCCTGCCGCAGGC +
Preference number: 1 (lower is better)
Translates to: SRDLPGIKPPAEVCG*AHMIVMDGWQPAAG
Trigger: GCCTGCGGCAGGCTGCCAGCCATCCATGACAATCATGTGAGCTCAGCCACAGACCTCAGCTGGCGGTTTGATCCCTGGCAGGTCCCTCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR TCA 90 bp TGCCAGGGATCAAACCGCCAGCTGAGGTCTGTGGCTGAGCTCACATaGTTGTCATGGATGGCTGGCAGCCTGCCGCAGGCTGACACGCCA +
Preference number: 1 (lower is better)
Translates to: CQGSNRQLRSVAELT*LSWMAGSLPQADTP
Trigger: TGGCGTGTCAGCCTGCGGCAGGCTGCCAGCCATCCATGACAATCATGTGAGCTCAGCCACAGACCTCAGCTGGCGGTTTGATCCCTGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR GCA 90 bp CCAACCACAAGGCACCGCTCTTTCCGGAGGTCCCCATCAGCGGTGTaGGGTAAGCTCTGCATCCTAAGTGCACGTGGTGACTGGTGCTCC +
Preference number: 1 (lower is better)
Translates to: PTTRHRSFRRSPSAV*GKLCILSARGDWCS
Trigger: GGAGCACCAGTCACCACGTGCACTTAGGATGCAGAGCTTACCGCACACCGCTGATGGGGACCTCCGGAAAGAGCGGTGCCTTGTGGTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR GCA 90 bp CACCGCTCTTTCCGGAGGTCCCCATCAGCGGTGTGCGGTAAGCTCTaGATCCTAAGTGCACGTGGTGACTGGTGCTCCGTGTTCTCTCCA +
Preference number: 1 (lower is better)
Translates to: HRSFRRSPSAVCGKL*ILSARGDWCSVFSP
Trigger: TGGAGAGAACACGGAGCACCAGTCACCACGTGCACTTAGGATGCAGAGCTTACCGCACACCGCTGATGGGGACCTCCGGAAAGAGCGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR TCA 90 bp CAGAGAGTCTGTCCGGCAATCGCCGCCAGCCGCAAGGACTGGCAGTaGGCAGCAGCAGCTCTGGATCACGGCTATGACCTGCTTAGAATA +
Preference number: 1 (lower is better)
Translates to: QRVCPAIAASRKDWQ*AAAALDHGYDLLRI
Trigger: TATTCTAAGCAGGTCATAGCCGTGATCCAGAGCTGCTGCTGCTCACTGCCAGTCCTTGCGGCTGGCGGCGATTGCCGGACAGACTCTCTG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR GCA 90 bp GTGGGAAAATGTGTGAAGCCTCTTACCAGTACTGCTCGAGGGACCTaGCAGGGATCAAACCGCCAGCTGAGGTCTGTGGCTGAGCTCACA +
Preference number: 1 (lower is better)
Translates to: VGKCVKPLTSTARGT*QGSNRQLRSVAELT
Trigger: TGTGAGCTCAGCCACAGACCTCAGCTGGCGGTTTGATCCCTGGCAGGTCCCTCGAGCAGTACTGGTAAGAGGCTTCACACATTTTCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR GCA 90 bp GCGGTGTGCGGTAAGCTCTGCATCCTAAGTGCACGTGGTGACTGGTaGTCCGTGTTCTCTCCACGTTACAAATATGACTGTCCCCTTTCT +
Preference number: 1 (lower is better)
Translates to: AVCGKLCILSARGDW*SVFSPRYKYDCPLS
Trigger: AGAAAGGGGACAGTCATATTTGTAACGTGGAGAGAACACGGAGCACCAGTCACCACGTGCACTTAGGATGCAGAGCTTACCGCACACCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR CCA 90 bp TCAGCGGTGTGCGGTAAGCTCTGCATCCTAAGTGCACGTGGTGACTaGTGCTCCGTGTTCTCTCCACGTTACAAATATGACTGTCCCCTT +
Preference number: 1 (lower is better)
Translates to: SAVCGKLCILSARGD*CSVFSPRYKYDCPL
Trigger: AAGGGGACAGTCATATTTGTAACGTGGAGAGAACACGGAGCACCAGTCACCACGTGCACTTAGGATGCAGAGCTTACCGCACACCGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR TCA 90 bp GTCATCCCAGGACTAGACATACTGGGCCTCCACTCGGGCTGCCAGTaGAGGAATTTTCAAGTGCCCACTGAGGCAACTAAGCATGTTGAT +
Preference number: 1 (lower is better)
Translates to: VIPGLDILGLHSGCQ*RNFQVPTEATKHVD
Trigger: ATCAACATGCTTAGTTGCCTCAGTGGGCACTTGAAAATTCCTTCACTGGCAGCCCGAGTGGAGGCCCAGTATGTCTAGTCCTGGGATGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR GCA 90 bp ATGAACTGTAAGAGTGGGAAAATGTGTGAAGCCTCTTACCAGTACTaGTCGAGGGACCTGCCAGGGATCAAACCGCCAGCTGAGGTCTGT +
Preference number: 1 (lower is better)
Translates to: MNCKSGKMCEASYQY*SRDLPGIKPPAEVC
Trigger: ACAGACCTCAGCTGGCGGTTTGATCCCTGGCAGGTCCCTCGAGCAGTACTGGTAAGAGGCTTCACACATTTTCCCACTCTTACAGTTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR GCA 90 bp ACATACTGGGCCTCCACTCGGGCTGCCAGTGAAGGAATTTTCAAGTaGCCACTGAGGCAACTAAGCATGTTGATTCCAACCTTCTCATGT +
Preference number: 1 (lower is better)
Translates to: TYWASTRAASEGIFK*PLRQLSMLIPTFSC
Trigger: ACATGAGAAGGTTGGAATCAACATGCTTAGTTGCCTCAGTGGGCACTTGAAAATTCCTTCACTGGCAGCCCGAGTGGAGGCCCAGTATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR GCA 90 bp CTGAAGAGTGATTCGAAGGCCTCAACCAAAGTATGTTCTCTTCTCTaGTGGTCCAACCTAAGTCAACCAACCCTGCTGGTCCAACAACTT +
Preference number: 1 (lower is better)
Translates to: LKSDSKASTKVCSLL*WSNLSQPTLLVQQL
Trigger: AAGTTGTTGGACCAGCAGGGTTGGTTGACTTAGGTTGGACCAGCAGAGAAGAGAACATACTTTGGTTGAGGCCTTCGAATCACTCTTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR TCA 90 bp GACGTCTCTCCACTGCTCAAGTCTGTCTATTTCAGAACTGAAGAGTaGTTCGAAGGCCTCAACCAAAGTATGTTCTCTTCTCTGCTGGTC +
Preference number: 1 (lower is better)
Translates to: DVSPLLKSVYFRTEE*FEGLNQSMFSSLLV
Trigger: GACCAGCAGAGAAGAGAACATACTTTGGTTGAGGCCTTCGAATCACTCTTCAGTTCTGAAATAGACAGACTTGAGCAGTGGAGAGACGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR GCA 90 bp ATCAGAATCAGGAAGGAGAGAAATGCGGTTAATTTCCATCCTGACTaGAGGCCACAACCCTCACGTAACTTTGGGAAAACAATTCCTGAA +
Preference number: 1 (lower is better)
Translates to: IRIRKERNAVNFHPD*RPQPSRNFGKTIPE
Trigger: TTCAGGAATTGTTTTCCCAAAGTTACGTGAGGGTTGTGGCCTGCAGTCAGGATGGAAATTAACCGCATTTCTCTCCTTCCTGATTCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR GCA 90 bp AGTTCACATCCACCTAACTCAGTTTTAGGAAAGACGTCTCTCCACTaGTCAAGTCTGTCTATTTCAGAACTGAAGAGTGATTCGAAGGCC +
Preference number: 1 (lower is better)
Translates to: SSHPPNSVLGKTSLH*SSLSISELKSDSKA
Trigger: GGCCTTCGAATCACTCTTCAGTTCTGAAATAGACAGACTTGAGCAGTGGAGAGACGTCTTTCCTAAAACTGAGTTAGGTGGATGTGAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR CCA 90 bp TGCTCCACAAGGGAGATCCCACTTCCCAAGCCCTCAGAATCAAACTaGCATTGGAAGTGTTTTCAGAGCTTAATAAAGAAACTACAGACA +
Preference number: 1 (lower is better)
Translates to: CSTREIPLPKPSESN*HWKCFQSLIKKLQT
Trigger: TGTCTGTAGTTTCTTTATTAAGCTCTGAAAACACTTCCAATGCCAGTTTGATTCTGAGGGCTTGGGAAGTGGGATCTCCCTTGTGGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR TCA 90 bp AAGCTGACTGCTAATCTGAATTTCTGGCATACAATCTTATCTTTCTaGGAGGATCTGGCCTCTGCACTCAAGCAGTACAAAACAGACAGG +
Preference number: 1 (lower is better)
Translates to: KLTANLNFWHTILSF*EDLASALKQYKTDR
Trigger: CCTGTCTGTTTTGTACTGCTTGAGTGCAGAGGCCAGATCCTCTCAGAAAGATAAGATTGTATGCCAGAAATTCAGATTAGCAGTCAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR CCA 90 bp ACAAGGGAGATCCCACTTCCCAAGCCCTCAGAATCAAACTGGCATTaGAAGTGTTTTCAGAGCTTAATAAAGAAACTACAGACAACTTCG +
Preference number: 1 (lower is better)
Translates to: TREIPLPKPSESNWH*KCFQSLIKKLQTTS
Trigger: CGAAGTTGTCTGTAGTTTCTTTATTAAGCTCTGAAAACACTTCCAATGCCAGTTTGATTCTGAGGGCTTGGGAAGTGGGATCTCCCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR GCA 90 bp CCGTGTTCTCTCCACGTTACAAATATGACTGTCCCCTTTCTAATATaGGATGGCAGACGTCGTAATTTATGCCATCTAGATCTTCAAATC +
Preference number: 1 (lower is better)
Translates to: PCSLHVTNMTVPFLI*DGRRRNLCHLDLQI
Trigger: GATTTGAAGATCTAGATGGCATAAATTACGACGTCTGCCATCGCATATTAGAAAGGGGACAGTCATATTTGTAACGTGGAGAGAACACGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR GCA 90 bp ACCACACTACAAGCTACCAAGACAATCTCATGTAACATAAATCTCTaGCAGCCAAGATGTAACACAGAGGTTAAGACACATTCAGTTCCT +
Preference number: 1 (lower is better)
Translates to: TTLQATKTISCNINL*QPRCNTEVKTHSVP
Trigger: AGGAACTGAATGTGTCTTAACCTCTGTGTTACATCTTGGCTGGCAGAGATTTATGTTACATGAGATTGTCTTGGTAGCTTGTAGTGTGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR-3UTR CCA 90 bp AGGATGAGAGCCAGGCCACAGAGAGTCTGTCCGGCAATCGCCGCCAGCCGCAAGAGTGCACGTGGTGACTaGTGCTCCGTGTTCTCTCCA +
Preference number: 2 (lower is better)
Translates to: RMRARPQRVCPAIAASRKSARGD*CSVFSP
Trigger: TGGAGAGAACACGGAGCACCAGTCACCACGTGCACT...CTTGCGGCTGGCGGCGATTGCCGGACAGACTCTCTGTGGCCTGGCTCTCATCCT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR-3UTR TCA 90 bp AGGATGAGAGCCAGGCCACAGAGAGTCTGTCCGGCAATCGCCGCCAGCCGCAAGAGTACAGTTCAGCGCTaGAGTCCACCTGATGCTACC +
Preference number: 2 (lower is better)
Translates to: RMRARPQRVCPAIAASRKSTVQR*SPPDAT
Trigger: GGTAGCATCAGGTGGACTTCAGCGCTGAACTGTACT...CTTGCGGCTGGCGGCGATTGCCGGACAGACTCTCTGTGGCCTGGCTCTCATCCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR-3UTR CCA 90 bp AGGATGAGAGCCAGGCCACAGAGAGTCTGTCCGGCAATCGCCGCCAGCCGCAAGGTGATAAAGACAATCTaGCGACTCCAGGGCCTACCA +
Preference number: 2 (lower is better)
Translates to: RMRARPQRVCPAIAASRKVIKTI*RLQGLP
Trigger: TGGTAGGCCCTGGAGTCGCCAGATTGTCTTTATCAC...CTTGCGGCTGGCGGCGATTGCCGGACAGACTCTCTGTGGCCTGGCTCTCATCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR-3UTR TCA 90 bp AGGATGAGAGCCAGGCCACAGAGAGTCTGTCCGGCAATCGCCGCCAGCCGCAAGTACCTGTGTAATATGTaGGCAACTCCCCGACTGAAG +
Preference number: 2 (lower is better)
Translates to: RMRARPQRVCPAIAASRKYLCNM*ATPRLK
Trigger: CTTCAGTCGGGGAGTTGCTCACATATTACACAGGTA...CTTGCGGCTGGCGGCGATTGCCGGACAGACTCTCTGTGGCCTGGCTCTCATCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR-3UTR TCA 90 bp AGGATGAGAGCCAGGCCACAGAGAGTCTGTCCGGCAATCGCCGCCAGCCGCAAGGATAGCATTCTATGCTaGCCCAGTAAAACCCAGGCA +
Preference number: 2 (lower is better)
Translates to: RMRARPQRVCPAIAASRKDSILC*PSKTQA
Trigger: TGCCTGGGTTTTACTGGGTCAGCATAGAATGCTATC...CTTGCGGCTGGCGGCGATTGCCGGACAGACTCTCTGTGGCCTGGCTCTCATCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR-3UTR TCA 90 bp AGGATGAGAGCCAGGCCACAGAGAGTCTGTCCGGCAATCGCCGCCAGCCGCAAGTTCAGAACTGAAGAGTaGTTCGAAGGCCTCAACCAA +
Preference number: 2 (lower is better)
Translates to: RMRARPQRVCPAIAASRKFRTEE*FEGLNQ
Trigger: TTGGTTGAGGCCTTCGAATCACTCTTCAGTTCTGAA...CTTGCGGCTGGCGGCGATTGCCGGACAGACTCTCTGTGGCCTGGCTCTCATCCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR-3UTR GCA 90 bp ACCTTGGGAGAGAACTTCCAGGCCAACCACAAGGCACCGCTCTTTCCGGAGGTCAGCAGTAAGCAGCTATaGACCACTGCTCCATCCCCT +
Preference number: 2 (lower is better)
Translates to: TLGENFQANHKAPLFPEVSSKQL*TTAPSP
Trigger: AGGGGATGGAGCAGTGGTGCATAGCTGCTTACTGCT...GACCTCCGGAAAGAGCGGTGCCTTGTGGTTGGCCTGGAAGTTCTCTCCCAAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR-3UTR TCA 90 bp AGGATGAGAGCCAGGCCACAGAGAGTCTGTCCGGCAATCGCCGCCAGCCGCAAGGAGTTTTCCCAACTTTaGAATGCCAAACAGGGCTTA +
Preference number: 2 (lower is better)
Translates to: RMRARPQRVCPAIAASRKEFSQL*NAKQGL
Trigger: TAAGCCCTGTTTGGCATTTCAAAGTTGGGAAAACTC...CTTGCGGCTGGCGGCGATTGCCGGACAGACTCTCTGTGGCCTGGCTCTCATCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR-3UTR TCA 90 bp AGGATGAGAGCCAGGCCACAGAGAGTCTGTCCGGCAATCGCCGCCAGCCGCAAGTGTCTATTTCAGAACTaGAGAGTGATTCGAAGGCCT +
Preference number: 2 (lower is better)
Translates to: RMRARPQRVCPAIAASRKCLFQN*RVIRRP
Trigger: AGGCCTTCGAATCACTCTTCAGTTCTGAAATAGACA...CTTGCGGCTGGCGGCGATTGCCGGACAGACTCTCTGTGGCCTGGCTCTCATCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR-3UTR TCA 90 bp AAATGTGTGAAGCCTCTTACCAGTACTGCTCGAGGGACCTGCCAGGGATCAAACCTGACACGCCAAGGATaGGAGCCAGGCCACAGAGAG +
Preference number: 2 (lower is better)
Translates to: KCVKPLTSTARGTCQGSNLTRQG*EPGHRE
Trigger: CTCTCTGTGGCCTGGCTCTCATCCTTGGCGTGTCAG...GTTTGATCCCTGGCAGGTCCCTCGAGCAGTACTGGTAAGAGGCTTCACACATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR-3UTR GCA 90 bp AAATGTGTGAAGCCTCTTACCAGTACTGCTCGAGGGACCTGCCAGGGATCAAACCCAGCCAGCTCCAGCTaGTCCACAAGGGAGATCCCA +
Preference number: 2 (lower is better)
Translates to: KCVKPLTSTARGTCQGSNPASSS*STREIP
Trigger: TGGGATCTCCCTTGTGGAGCAGCTGGAGCTGGCTGG...GTTTGATCCCTGGCAGGTCCCTCGAGCAGTACTGGTAAGAGGCTTCACACATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR-3UTR GCA 90 bp AGGATGAGAGCCAGGCCACAGAGAGTCTGTCCGGCAATCGCCGCCAGCCGCAAGACTCTACAAAGCAGCTaGTTCAAAGACATAGGTCAG +
Preference number: 2 (lower is better)
Translates to: RMRARPQRVCPAIAASRKTLQSS*FKDIGQ
Trigger: CTGACCTATGTCTTTGAAGCAGCTGCTTTGTAGAGT...CTTGCGGCTGGCGGCGATTGCCGGACAGACTCTCTGTGGCCTGGCTCTCATCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR-3UTR TCA 90 bp AGGATGAGAGCCAGGCCACAGAGAGTCTGTCCGGCAATCGCCGCCAGCCGCAAGATTCCAAGAGACTACTaGTGCTCCAACTACAAAAAG +
Preference number: 2 (lower is better)
Translates to: RMRARPQRVCPAIAASRKIPRDY*CSNYKK
Trigger: CTTTTTGTAGTTGGAGCATCAGTAGTCTCTTGGAAT...CTTGCGGCTGGCGGCGATTGCCGGACAGACTCTCTGTGGCCTGGCTCTCATCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR-3UTR TCA 90 bp AAATGTGTGAAGCCTCTTACCAGTACTGCTCGAGGGACCTGCCAGGGATCAAACCCTAAGTGCACGTGGTaGCTGGTGCTCCGTGTTCTC +
Preference number: 2 (lower is better)
Translates to: KCVKPLTSTARGTCQGSNPKCTW*LVLRVL
Trigger: GAGAACACGGAGCACCAGTCACCACGTGCACTTAGG...GTTTGATCCCTGGCAGGTCCCTCGAGCAGTACTGGTAAGAGGCTTCACACATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR-3UTR TCA 90 bp GATCACGACCCCATGGAGGTCTTAAGTATCTCCAGACTGAAGCTAGAACAAGTACAGCCTGCCGCAGGCTaGCACGCCAAGGATGAGAGC +
Preference number: 2 (lower is better)
Translates to: DHDPMEVLSISRLKLEQVQPAAG*HAKDES
Trigger: GCTCTCATCCTTGGCGTGTCAGCCTGCGGCAGGCTG...TACTTGTTCTAGCTTCAGTCTGGAGATACTTAAGACCTCCATGGGGTCGTGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR-3UTR CCA 90 bp GATCACGACCCCATGGAGGTCTTAAGTATCTCCAGACTGAAGCTAGAACAAGTACTCTGGAAGAGGCACTaGGGAGGCCAAGGGCCCTTC +
Preference number: 2 (lower is better)
Translates to: DHDPMEVLSISRLKLEQVLWKRH*GGQGPF
Trigger: GAAGGGCCCTTGGCCTCCCCAGTGCCTCTTCCAGAG...TACTTGTTCTAGCTTCAGTCTGGAGATACTTAAGACCTCCATGGGGTCGTGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR-3UTR TCA 90 bp ACCTTGGGAGAGAACTTCCAGGCCAACCACAAGGCACCGCTCTTTCCGGAGGTCTACCACGTATCTCTCTaGAGGCATCTAAGTCTACAA +
Preference number: 2 (lower is better)
Translates to: TLGENFQANHKAPLFPEVYHVSL*RHLSLQ
Trigger: TTGTAGACTTAGATGCCTTCAGAGAGATACGTGGTA...GACCTCCGGAAAGAGCGGTGCCTTGTGGTTGGCCTGGAAGTTCTCTCCCAAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR-3UTR TCA 90 bp ACCTTGGGAGAGAACTTCCAGGCCAACCACAAGGCACCGCTCTTTCCGGAGGTCAGAGAAATTGCACATTaGCTACAGGGACTCACTACT +
Preference number: 2 (lower is better)
Translates to: TLGENFQANHKAPLFPEVREIAH*LQGLTT
Trigger: AGTAGTGAGTCCCTGTAGTCAATGTGCAATTTCTCT...GACCTCCGGAAAGAGCGGTGCCTTGTGGTTGGCCTGGAAGTTCTCTCCCAAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR-3UTR TCA 90 bp AAATGTGTGAAGCCTCTTACCAGTACTGCTCGAGGGACCTGCCAGGGATCAAACGCGCTGAAGTCCACCTaGTGCTACCTGTGTAATATG +
Preference number: 2 (lower is better)
Translates to: KCVKPLTSTARGTCQGSNALKST*CYLCNM
Trigger: CATATTACACAGGTAGCATCAGGTGGACTTCAGCGC...GTTTGATCCCTGGCAGGTCCCTCGAGCAGTACTGGTAAGAGGCTTCACACATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR-3UTR GCA 90 bp ACCTTGGGAGAGAACTTCCAGGCCAACCACAAGGCACCGCTCTTTCCGGAGGTCATCACTGAAGTTGGATaGATGTACCCGATTCCTAAT +
Preference number: 2 (lower is better)
Translates to: TLGENFQANHKAPLFPEVITEVG*MYPIPN
Trigger: ATTAGGAATCGGGTACATGCATCCAACTTCAGTGAT...GACCTCCGGAAAGAGCGGTGCCTTGTGGTTGGCCTGGAAGTTCTCTCCCAAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR-3UTR GCA 90 bp GATCACGACCCCATGGAGGTCTTAAGTATCTCCAGACTGAAGCTAGAACAAGTAGCACGTGGTGACTGGTaGTCCGTGTTCTCTCCACGT +
Preference number: 2 (lower is better)
Translates to: DHDPMEVLSISRLKLEQVARGDW*SVFSPR
Trigger: ACGTGGAGAGAACACGGAGCACCAGTCACCACGTGC...TACTTGTTCTAGCTTCAGTCTGGAGATACTTAAGACCTCCATGGGGTCGTGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR-3UTR TCA 90 bp AAATGTGTGAAGCCTCTTACCAGTACTGCTCGAGGGACCTGCCAGGGATCAAACGCTAGAAGGTATCACTaGAGTTGGATGCATGTACCC +
Preference number: 2 (lower is better)
Translates to: KCVKPLTSTARGTCQGSNARRYH*SWMHVP
Trigger: GGGTACATGCATCCAACTTCAGTGATACCTTCTAGC...GTTTGATCCCTGGCAGGTCCCTCGAGCAGTACTGGTAAGAGGCTTCACACATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR-3UTR TCA 90 bp GATCACGACCCCATGGAGGTCTTAAGTATCTCCAGACTGAAGCTAGAACAAGTAGTGGCTGAGCTCACATaGTTGTCATGGATGGCTGGC +
Preference number: 2 (lower is better)
Translates to: DHDPMEVLSISRLKLEQVVAELT*LSWMAG
Trigger: GCCAGCCATCCATGACAATCATGTGAGCTCAGCCAC...TACTTGTTCTAGCTTCAGTCTGGAGATACTTAAGACCTCCATGGGGTCGTGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR-3UTR GCA 90 bp AAATGTGTGAAGCCTCTTACCAGTACTGCTCGAGGGACCTGCCAGGGATCAAACGTCCCCTTTCTAATATaGGATGGCAGACGTCGTAAT +
Preference number: 2 (lower is better)
Translates to: KCVKPLTSTARGTCQGSNVPFLI*DGRRRN
Trigger: ATTACGACGTCTGCCATCGCATATTAGAAAGGGGAC...GTTTGATCCCTGGCAGGTCCCTCGAGCAGTACTGGTAAGAGGCTTCACACATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR-3UTR TCA 90 bp TTAGAGAAATTGCACATTGACTACAGGGACTCACTACTAGTACAGTTCAGCGCTCACTCGGGCTGCCAGTaGAGGAATTTTCAAGTGCCC +
Preference number: 2 (lower is better)
Translates to: LEKLHIDYRDSLLVQFSAHSGCQ*RNFQVP
Trigger: GGGCACTTGAAAATTCCTTCACTGGCAGCCCGAGTG...AGCGCTGAACTGTACTAGTAGTGAGTCCCTGTAGTCAATGTGCAATTTCTCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR-3UTR TCA 90 bp TGGTGCTCCGTGTTCTCTCCACGTTACAAATATGACTGTCCCCTTTCTAATATGCACATCATTTCACACTaGAGCAGCTCCCTGGGGGAA +
Preference number: 2 (lower is better)
Translates to: WCSVFSPRYKYDCPLSNMHIISH*SSSLGE
Trigger: TTCCCCCAGGGAGCTGCTTCAGTGTGAAATGATGTG...CATATTAGAAAGGGGACAGTCATATTTGTAACGTGGAGAGAACACGGAGCACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR-3UTR GCA 90 bp GATCACGACCCCATGGAGGTCTTAAGTATCTCCAGACTGAAGCTAGAACAAGTATCACAAGCAGTAACATaGCATCTCCCCACTGTCAGG +
Preference number: 2 (lower is better)
Translates to: DHDPMEVLSISRLKLEQVSQAVT*HLPTVR
Trigger: CCTGACAGTGGGGAGATGGCATGTTACTGCTTGTGA...TACTTGTTCTAGCTTCAGTCTGGAGATACTTAAGACCTCCATGGGGTCGTGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR-3UTR GCA 90 bp TGGTGCTCCGTGTTCTCTCCACGTTACAAATATGACTGTCCCCTTTCTAATATGAATTTCCATCCTGACTaGAGGCCACAACCCTCACGT +
Preference number: 2 (lower is better)
Translates to: WCSVFSPRYKYDCPLSNMNFHPD*RPQPSR
Trigger: ACGTGAGGGTTGTGGCCTGCAGTCAGGATGGAAATT...CATATTAGAAAGGGGACAGTCATATTTGTAACGTGGAGAGAACACGGAGCACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR-3UTR GCA 90 bp GATCACGACCCCATGGAGGTCTTAAGTATCTCCAGACTGAAGCTAGAACAAGTAAAGGAGACTGACGCATaGCAACACTTCTACATGGGA +
Preference number: 2 (lower is better)
Translates to: DHDPMEVLSISRLKLEQVKETDA*QHFYMG
Trigger: TCCCATGTAGAAGTGTTGGCATGCGTCAGTCTCCTT...TACTTGTTCTAGCTTCAGTCTGGAGATACTTAAGACCTCCATGGGGTCGTGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR-3UTR TCA 90 bp TTAGAGAAATTGCACATTGACTACAGGGACTCACTACTAGTACAGTTCAGCGCTCCCAAAAGACAAAGATaGTCCAAGATGGGCTGCCTC +
Preference number: 2 (lower is better)
Translates to: LEKLHIDYRDSLLVQFSAPKRQR*SKMGCL
Trigger: GAGGCAGCCCATCTTGGATCATCTTTGTCTTTTGGG...AGCGCTGAACTGTACTAGTAGTGAGTCCCTGTAGTCAATGTGCAATTTCTCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR-3UTR TCA 90 bp TGGTGCTCCGTGTTCTCTCCACGTTACAAATATGACTGTCCCCTTTCTAATATGCTTGAGGTAAGAAAGTaGAGAGCTACGCATCTACCC +
Preference number: 2 (lower is better)
Translates to: WCSVFSPRYKYDCPLSNMLEVRK*RATHLP
Trigger: GGGTAGATGCGTAGCTCTTCACTTTCTTACCTCAAG...CATATTAGAAAGGGGACAGTCATATTTGTAACGTGGAGAGAACACGGAGCACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR-3UTR GCA 90 bp GATCACGACCCCATGGAGGTCTTAAGTATCTCCAGACTGAAGCTAGAACAAGTAGAAGGAATTTTCAAGTaGCCACTGAGGCAACTAAGC +
Preference number: 2 (lower is better)
Translates to: DHDPMEVLSISRLKLEQVEGIFK*PLRQLS
Trigger: GCTTAGTTGCCTCAGTGGGCACTTGAAAATTCCTTC...TACTTGTTCTAGCTTCAGTCTGGAGATACTTAAGACCTCCATGGGGTCGTGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR-3UTR TCA 90 bp GATCACGACCCCATGGAGGTCTTAAGTATCTCCAGACTGAAGCTAGAACAAGTACAGACCAACTGTAACTaGAAAGCTGTGAAACCAGTA +
Preference number: 2 (lower is better)
Translates to: DHDPMEVLSISRLKLEQVQTNCN*KAVKPV
Trigger: TACTGGTTTCACAGCTTTTCAGTTACAGTTGGTCTG...TACTTGTTCTAGCTTCAGTCTGGAGATACTTAAGACCTCCATGGGGTCGTGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR-3UTR GCA 90 bp GATCACGACCCCATGGAGGTCTTAAGTATCTCCAGACTGAAGCTAGAACAAGTAAAGACGTCTCTCCACTaGTCAAGTCTGTCTATTTCA +
Preference number: 2 (lower is better)
Translates to: DHDPMEVLSISRLKLEQVKTSLH*SSLSIS
Trigger: TGAAATAGACAGACTTGAGCAGTGGAGAGACGTCTT...TACTTGTTCTAGCTTCAGTCTGGAGATACTTAAGACCTCCATGGGGTCGTGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR-3UTR GCA 90 bp TTCCAACCTTCTCATGTACCCAGTGAGACTGAGGCAGTGAAGTCTAAATTGAAAAGCCAGTCAGGAATCTaGCCAGAGTTGAAAACCAAG +
Preference number: 2 (lower is better)
Translates to: FQPSHVPSETEAVKSKLKSQSGI*PELKTK
Trigger: CTTGGTTTTCAACTCTGGGCAGATTCCTGACTGGCT...TTTCAATTTAGACTTCACTGCCTCAGTCTCACTGGGTACATGAGAAGGTTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR-3UTR GCA 90 bp TTCCAACCTTCTCATGTACCCAGTGAGACTGAGGCAGTGAAGTCTAAATTGAAAAGAGGATCTGGCCTCTaGACTCAAGCAGTACAAAAC +
Preference number: 2 (lower is better)
Translates to: FQPSHVPSETEAVKSKLKRGSGL*TQAVQN
Trigger: GTTTTGTACTGCTTGAGTGCAGAGGCCAGATCCTCT...TTTCAATTTAGACTTCACTGCCTCAGTCTCACTGGGTACATGAGAAGGTTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR CAA 90 bp CACAAGGGAGATCCCACTTCCCAAGCCCTCAGAATCAAACTGGCATaGGAAGTGTTTTCAGAGCTTAATAAAGAAACTACAGACAACTTC +
Preference number: 2 (lower is better)
Translates to: HKGDPTSQALRIKLA*EVFSELNKETTDNF
Trigger: GAAGTTGTCTGTAGTTTCTTTATTAAGCTCTGAAAACACTTCCAATGCCAGTTTGATTCTGAGGGCTTGGGAAGTGGGATCTCCCTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR-3UTR TCA 90 bp TTCCAACCTTCTCATGTACCCAGTGAGACTGAGGCAGTGAAGTCTAAATTGAAACACCTGCATCCCATCTaGAATAACATCAGAATCAGG +
Preference number: 2 (lower is better)
Translates to: FQPSHVPSETEAVKSKLKHLHPI*NNIRIR
Trigger: CCTGATTCTGATGTTATTTCAGATGGGATGCAGGTG...TTTCAATTTAGACTTCACTGCCTCAGTCTCACTGGGTACATGAGAAGGTTGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR-3UTR TCA 90 bp TTAGAGAAATTGCACATTGACTACAGGGACTCACTACTAGTACAGTTCAGCGCTACAATCTTATCTTTCTaGGAGGATCTGGCCTCTGCA +
Preference number: 2 (lower is better)
Translates to: LEKLHIDYRDSLLVQFSATILSF*EDLASA
Trigger: TGCAGAGGCCAGATCCTCTCAGAAAGATAAGATTGT...AGCGCTGAACTGTACTAGTAGTGAGTCCCTGTAGTCAATGTGCAATTTCTCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR-3UTR GCA 90 bp TGGTGCTCCGTGTTCTCTCCACGTTACAAATATGACTGTCCCCTTTCTAATATGGTATGTTCTCTTCTCTaGTGGTCCAACCTAAGTCAA +
Preference number: 2 (lower is better)
Translates to: WCSVFSPRYKYDCPLSNMVCSLL*WSNLSQ
Trigger: TTGACTTAGGTTGGACCAGCAGAGAAGAGAACATAC...CATATTAGAAAGGGGACAGTCATATTTGTAACGTGGAGAGAACACGGAGCACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR-3UTR CCA 90 bp GATCACGACCCCATGGAGGTCTTAAGTATCTCCAGACTGAAGCTAGAACAAGTATCTAAAGATTTAACATaGCTAGACAGAGCCTTGAGG +
Preference number: 2 (lower is better)
Translates to: DHDPMEVLSISRLKLEQVSKDLT*LDRALR
Trigger: CCTCAAGGCTCTGTCTAGCCATGTTAAATCTTTAGA...TACTTGTTCTAGCTTCAGTCTGGAGATACTTAAGACCTCCATGGGGTCGTGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR-3UTR CCA 90 bp TTAGAGAAATTGCACATTGACTACAGGGACTCACTACTAGTACAGTTCAGCGCTACTTCCAGCAGATGCTaGAGTTTTCCCAACTTTGAA +
Preference number: 2 (lower is better)
Translates to: LEKLHIDYRDSLLVQFSATSSRC*SFPNFE
Trigger: TTCAAAGTTGGGAAAACTCCAGCATCTGCTGGAAGT...AGCGCTGAACTGTACTAGTAGTGAGTCCCTGTAGTCAATGTGCAATTTCTCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR-3UTR CCA 90 bp TATAATTCTGAAATGCGAGGGGTGGGGAAGATAACTAATAATTTACCTTTCAACGTCAACCAACCCTGCTaGTCCAACAACTTCCAGCAG +
Preference number: 2 (lower is better)
Translates to: YNSEMRGVGKITNNLPFNVNQPC*SNNFQQ
Trigger: CTGCTGGAAGTTGTTGGACCAGCAGGGTTGGTTGAC...GTTGAAAGGTAAATTATTAGTTATCTTCCCCACCCCTCGCATTTCAGAATTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR-3UTR CCA 90 bp TGGTGCTCCGTGTTCTCTCCACGTTACAAATATGACTGTCCCCTTTCTAATATGAAAGATGATCCAAGATaGGCTGCCTCATACGTTATA +
Preference number: 2 (lower is better)
Translates to: WCSVFSPRYKYDCPLSNMKDDPR*AASYVI
Trigger: TATAACGTATGAGGCAGCCCATCTTGGATCATCTTT...CATATTAGAAAGGGGACAGTCATATTTGTAACGTGGAGAGAACACGGAGCACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR-3UTR GCA 90 bp TGGTGCTCCGTGTTCTCTCCACGTTACAAATATGACTGTCCCCTTTCTAATATGTACAACTATAGACCCTaGTCTACACACTATCAGAAT +
Preference number: 2 (lower is better)
Translates to: WCSVFSPRYKYDCPLSNMYNYRP*STHYQN
Trigger: ATTCTGATAGTGTGTAGAGCAGGGTCTATAGTTGTA...CATATTAGAAAGGGGACAGTCATATTTGTAACGTGGAGAGAACACGGAGCACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR-3UTR CCA 90 bp TGGTGCTCCGTGTTCTCTCCACGTTACAAATATGACTGTCCCCTTTCTAATATGGAATCAAACTGGCATTaGAAGTGTTTTCAGAGCTTA +
Preference number: 2 (lower is better)
Translates to: WCSVFSPRYKYDCPLSNMESNWH*KCFQSL
Trigger: TAAGCTCTGAAAACACTTCCAATGCCAGTTTGATTC...CATATTAGAAAGGGGACAGTCATATTTGTAACGTGGAGAGAACACGGAGCACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR-3UTR GCA 90 bp TGGTGCTCCGTGTTCTCTCCACGTTACAAATATGACTGTCCCCTTTCTAATATGTATGAATGGCCTCACTaGATTTTCATAAAACACCAA +
Preference number: 2 (lower is better)
Translates to: WCSVFSPRYKYDCPLSNMYEWPH*IFIKHQ
Trigger: TTGGTGTTTTATGAAAATGCAGTGAGGCCATTCATA...CATATTAGAAAGGGGACAGTCATATTTGTAACGTGGAGAGAACACGGAGCACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR-3UTR GCA 90 bp TTAGAGAAATTGCACATTGACTACAGGGACTCACTACTAGTACAGTTCAGCGCTTCAGCATCAATTATTTaGCCAAGTATTAGGTCCCAA +
Preference number: 2 (lower is better)
Translates to: LEKLHIDYRDSLLVQFSASASII*PSIRSQ
Trigger: TTGGGACCTAATACTTGGGCAAATAATTGATGCTGA...AGCGCTGAACTGTACTAGTAGTGAGTCCCTGTAGTCAATGTGCAATTTCTCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR-3UTR GCA 90 bp TTAGAGAAATTGCACATTGACTACAGGGACTCACTACTAGTACAGTTCAGCGCTGTTATGGTTCTATGCTaGTTTAATACATCTACCTCT +
Preference number: 2 (lower is better)
Translates to: LEKLHIDYRDSLLVQFSAVMVLC*FNTSTS
Trigger: AGAGGTAGATGTATTAAAGCAGCATAGAACCATAAC...AGCGCTGAACTGTACTAGTAGTGAGTCCCTGTAGTCAATGTGCAATTTCTCTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR-3UTR CCA 90 bp TTCCAACCTTCTCATGTACCCAGTGAGACTGAGGCAGTGAAGTCTAAATTGAAAAGCATATTCCTGAGTTaGAGATCATTTATAAGCTAC +
Preference number: 2 (lower is better)
Translates to: FQPSHVPSETEAVKSKLKSIFLS*RSFISY
Trigger: GTAGCTTATAAATGATCTCCAACTCAGGAATATGCT...TTTCAATTTAGACTTCACTGCCTCAGTCTCACTGGGTACATGAGAAGGTTGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR-3UTR TCA 90 bp TATAATTCTGAAATGCGAGGGGTGGGGAAGATAACTAATAATTTACCTTTCAACAGGGTCACTGAAGTCTaGTTTTCAGGGCAAATAAAG +
Preference number: 2 (lower is better)
Translates to: YNSEMRGVGKITNNLPFNRVTEV*FSGQIK
Trigger: CTTTATTTGCCCTGAAAATCAGACTTCAGTGACCCT...GTTGAAAGGTAAATTATTAGTTATCTTCCCCACCCCTCGCATTTCAGAATTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR-3UTR CAA 90 bp AGGATGAGAGCCAGGCCACAGAGAGTCTGTCCGGCAATCGCCGCCAGCCGCAAGTGCAGTGAGCCGAGATaGCCCCACCACACTCCAGCC +
Preference number: 3 (lower is better)
Translates to: RMRARPQRVCPAIAASRKCSEPR*PHHTPA
Trigger: GGCTGGAGTGTGGTGGGGCAATCTCGGCTCACTGCA...CTTGCGGCTGGCGGCGATTGCCGGACAGACTCTCTGTGGCCTGGCTCTCATCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR GCA 72 bp TTCCGGAGGTCCCCATCAGCGGTGTGCGGTAAGCTCTaGATCCTAAGTGCACGTGGTGACTGGTGCTCCGTG +
Preference number: 3 (lower is better)
Translates to: FRRSPSAVCGKL*ILSARGDWCSV
Trigger: CACGGAGCACCAGTCACCACGTGCACTTAGGATGCAGAGCTTACCGCACACCGCTGATGGGGACCTCCGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR GCA 72 bp AGGCACCGCTCTTTCCGGAGGTCCCCATCAGCGGTGTaGGGTAAGCTCTGCATCCTAAGTGCACGTGGTGAC +
Preference number: 3 (lower is better)
Translates to: RHRSFRRSPSAV*GKLCILSARGD
Trigger: GTCACCACGTGCACTTAGGATGCAGAGCTTACCGCACACCGCTGATGGGGACCTCCGGAAAGAGCGGTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR TCA 72 bp ATGATTGTCATGGATGGCTGGCAGCCTGCCGCAGGCTaGCACGCCAAGGATGAGAGCCAGGCCACAGAGAGT +
Preference number: 3 (lower is better)
Translates to: MIVMDGWQPAAG*HAKDESQATES
Trigger: ACTCTCTGTGGCCTGGCTCTCATCCTTGGCGTGTCAGCCTGCGGCAGGCTGCCAGCCATCCATGACAATCAT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR-3UTR CAA 90 bp AGGATGAGAGCCAGGCCACAGAGAGTCTGTCCGGCAATCGCCGCCAGCCGCAAGCCCGCAGAGATCCTTTaGGTCAGGGTAACTTTTAGT +
Preference number: 3 (lower is better)
Translates to: RMRARPQRVCPAIAASRKPAEIL*VRVTFS
Trigger: ACTAAAAGTTACCCTGACCAAAAGGATCTCTGCGGG...CTTGCGGCTGGCGGCGATTGCCGGACAGACTCTCTGTGGCCTGGCTCTCATCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR TCA 72 bp CTGCTCGAGGGACCTGCCAGGGATCAAACCGCCAGCTaGGGTCTGTGGCTGAGCTCACATGATTGTCATGGA +
Preference number: 3 (lower is better)
Translates to: LLEGPARDQTAS*GLWLSSHDCHG
Trigger: TCCATGACAATCATGTGAGCTCAGCCACAGACCTCAGCTGGCGGTTTGATCCCTGGCAGGTCCCTCGAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR GCA 72 bp TGTGTGAAGCCTCTTACCAGTACTGCTCGAGGGACCTaGCAGGGATCAAACCGCCAGCTGAGGTCTGTGGCT +
Preference number: 3 (lower is better)
Translates to: CVKPLTSTARGT*QGSNRQLRSVA
Trigger: AGCCACAGACCTCAGCTGGCGGTTTGATCCCTGGCAGGTCCCTCGAGCAGTACTGGTAAGAGGCTTCACACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR TCA 72 bp CCTCCACGGATACATCCACCCCTCTGTAAAGGAGACTaGCGCATGCCAACACTTCTACATGGGAAAGGGGAG +
Preference number: 3 (lower is better)
Translates to: PPRIHPPLCKGD*RMPTLLHGKGE
Trigger: CTCCCCTTTCCCATGTAGAAGTGTTGGCATGCGTCAGTCTCCTTTACAGAGGGGTGGATGTATCCGTGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR GCA 72 bp AAGAGTGGGAAAATGTGTGAAGCCTCTTACCAGTACTaGTCGAGGGACCTGCCAGGGATCAAACCGCCAGCT +
Preference number: 3 (lower is better)
Translates to: KSGKMCEASYQY*SRDLPGIKPPA
Trigger: AGCTGGCGGTTTGATCCCTGGCAGGTCCCTCGAGCAGTACTGGTAAGAGGCTTCACACATTTTCCCACTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR CCA 72 bp TGCGGTAAGCTCTGCATCCTAAGTGCACGTGGTGACTaGTGCTCCGTGTTCTCTCCACGTTACAAATATGAC +
Preference number: 3 (lower is better)
Translates to: CGKLCILSARGD*CSVFSPRYKYD
Trigger: GTCATATTTGTAACGTGGAGAGAACACGGAGCACCAGTCACCACGTGCACTTAGGATGCAGAGCTTACCGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR TCA 72 bp ACGCATCTACCCAAAACGGGAGTCGAAGAGGGCCACTaGCGCAACACATTAAAATCAGGAAGCTCCATTCTC +
Preference number: 3 (lower is better)
Translates to: THLPKTGVEEGH*RNTLKSGSSIL
Trigger: GAGAATGGAGCTTCCTGATTTTAATGTGTTGCGTCAGTGGCCCTCTTCGACTCCCGTTTTGGGTAGATGCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR GCA 72 bp GATTCGAAGGCCTCAACCAAAGTATGTTCTCTTCTCTaGTGGTCCAACCTAAGTCAACCAACCCTGCTGGTC +
Preference number: 3 (lower is better)
Translates to: DSKASTKVCSLL*WSNLSQPTLLV
Trigger: GACCAGCAGGGTTGGTTGACTTAGGTTGGACCAGCAGAGAAGAGAACATACTTTGGTTGAGGCCTTCGAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR GCA 72 bp GGTAAGCTCTGCATCCTAAGTGCACGTGGTGACTGGTaGTCCGTGTTCTCTCCACGTTACAAATATGACTGT +
Preference number: 3 (lower is better)
Translates to: GKLCILSARGDW*SVFSPRYKYDC
Trigger: ACAGTCATATTTGTAACGTGGAGAGAACACGGAGCACCAGTCACCACGTGCACTTAGGATGCAGAGCTTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR CCA 72 bp CCGACAATCACATCATTTCACACTGAAGCAGCTCCCTaGGGGAAGCAGGGCAGGCATAATAAATTACCCATG +
Preference number: 3 (lower is better)
Translates to: PTITSFHTEAAP*GKQGRHNKLPM
Trigger: CATGGGTAATTTATTATGCCTGCCCTGCTTCCCCCAGGGAGCTGCTTCAGTGTGAAATGATGTGATTGTCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR-3UTR CAA 90 bp AAATGTGTGAAGCCTCTTACCAGTACTGCTCGAGGGACCTGCCAGGGATCAAACAAGGTATCACTGAAGTaGGATGCATGTACCCGATTC +
Preference number: 3 (lower is better)
Translates to: KCVKPLTSTARGTCQGSNKVSLK*DACTRF
Trigger: GAATCGGGTACATGCATCCAACTTCAGTGATACCTT...GTTTGATCCCTGGCAGGTCCCTCGAGCAGTACTGGTAAGAGGCTTCACACATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR-3UTR CAA 90 bp AAATGTGTGAAGCCTCTTACCAGTACTGCTCGAGGGACCTGCCAGGGATCAAACAGGCAACTAAGCATGTaGATTCCAACCTTCTCATGT +
Preference number: 3 (lower is better)
Translates to: KCVKPLTSTARGTCQGSNRQLSM*IPTFSC
Trigger: ACATGAGAAGGTTGGAATCAACATGCTTAGTTGCCT...GTTTGATCCCTGGCAGGTCCCTCGAGCAGTACTGGTAAGAGGCTTCACACATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR GCA 72 bp AGGAAGGAGAGAAATGCGGTTAATTTCCATCCTGACTaGAGGCCACAACCCTCACGTAACTTTGGGAAAACA +
Preference number: 3 (lower is better)
Translates to: RKERNAVNFHPD*RPQPSRNFGKT
Trigger: TGTTTTCCCAAAGTTACGTGAGGGTTGTGGCCTGCAGTCAGGATGGAAATTAACCGCATTTCTCTCCTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR TCA 72 bp TTTAACATGGCTAGACAGAGCCTTGAGGTAAGAAAGTaGAGAGCTACGCATCTACCCAAAACGGGAGTCGAA +
Preference number: 3 (lower is better)
Translates to: FNMARQSLEVRK*RATHLPKTGVE
Trigger: TTCGACTCCCGTTTTGGGTAGATGCGTAGCTCTTCACTTTCTTACCTCAAGGCTCTGTCTAGCCATGTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR TCA 72 bp CGTCTCTCCACTGCTCAAGTCTGTCTATTTCAGAACTaGAGAGTGATTCGAAGGCCTCAACCAAAGTATGTT +
Preference number: 3 (lower is better)
Translates to: RLSTAQVCLFQN*RVIRRPQPKYV
Trigger: AACATACTTTGGTTGAGGCCTTCGAATCACTCTTCAGTTCTGAAATAGACAGACTTGAGCAGTGGAGAGACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR-3UTR CAA 90 bp TTAGAGAAATTGCACATTGACTACAGGGACTCACTACTAGTACAGTTCAGCGCTGCTTCGTTGGTTGTGTaGCGTTTTATAAAAGGACGG +
Preference number: 3 (lower is better)
Translates to: LEKLHIDYRDSLLVQFSAASLVV*RFIKGR
Trigger: CCGTCCTTTTATAAAACGCAACACAACCAACGAAGC...AGCGCTGAACTGTACTAGTAGTGAGTCCCTGTAGTCAATGTGCAATTTCTCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR-3UTR CAA 90 bp TTAGAGAAATTGCACATTGACTACAGGGACTCACTACTAGTACAGTTCAGCGCTCATGTGTGGGCTTCGTaGGTTGTGTTGCGTTTTATA +
Preference number: 3 (lower is better)
Translates to: LEKLHIDYRDSLLVQFSAHVWAS*VVLRFI
Trigger: TATAAAACGCAACACAACCAACGAAGCCCACACATG...AGCGCTGAACTGTACTAGTAGTGAGTCCCTGTAGTCAATGTGCAATTTCTCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR-3UTR CAA 90 bp TTCCAACCTTCTCATGTACCCAGTGAGACTGAGGCAGTGAAGTCTAAATTGAAAGGAGTTTTCCCAACTTaGAAATGCCAAACAGGGCTT +
Preference number: 3 (lower is better)
Translates to: FQPSHVPSETEAVKSKLKGVFPT*KCQTGL
Trigger: AAGCCCTGTTTGGCATTTCAAAGTTGGGAAAACTCC...TTTCAATTTAGACTTCACTGCCTCAGTCTCACTGGGTACATGAGAAGGTTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR TCA 72 bp CCACTGCTCAAGTCTGTCTATTTCAGAACTGAAGAGTaGTTCGAAGGCCTCAACCAAAGTATGTTCTCTTCT +
Preference number: 3 (lower is better)
Translates to: PLLKSVYFRTEE*FEGLNQSMFSS
Trigger: AGAAGAGAACATACTTTGGTTGAGGCCTTCGAATCACTCTTCAGTTCTGAAATAGACAGACTTGAGCAGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR GCA 72 bp CCACCTAACTCAGTTTTAGGAAAGACGTCTCTCCACTaGTCAAGTCTGTCTATTTCAGAACTGAAGAGTGAT +
Preference number: 3 (lower is better)
Translates to: PPNSVLGKTSLH*SSLSISELKSD
Trigger: ATCACTCTTCAGTTCTGAAATAGACAGACTTGAGCAGTGGAGAGACGTCTTTCCTAAAACTGAGTTAGGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR-3UTR CAA 90 bp TGGTGCTCCGTGTTCTCTCCACGTTACAAATATGACTGTCCCCTTTCTAATATGAACCCTCACGTAACTTaGGGAAAACAATTCCTGAAT +
Preference number: 3 (lower is better)
Translates to: WCSVFSPRYKYDCPLSNMNPHVT*GKQFLN
Trigger: ATTCAGGAATTGTTTTCCCAAAGTTACGTGAGGGTT...CATATTAGAAAGGGGACAGTCATATTTGTAACGTGGAGAGAACACGGAGCACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR-3UTR CAA 90 bp TGGTGCTCCGTGTTCTCTCCACGTTACAAATATGACTGTCCCCTTTCTAATATGAGAATCAAACTGGCATaGGAAGTGTTTTCAGAGCTT +
Preference number: 3 (lower is better)
Translates to: WCSVFSPRYKYDCPLSNMRIKLA*EVFSEL
Trigger: AAGCTCTGAAAACACTTCCAATGCCAGTTTGATTCT...CATATTAGAAAGGGGACAGTCATATTTGTAACGTGGAGAGAACACGGAGCACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR TCA 72 bp AACCACAATGTCCTAGGAGCAATTCCAAGAGACTACTaGTGCTCCAACTACAAAAAGCCACCAAAGTCAAAA +
Preference number: 3 (lower is better)
Translates to: NHNVLGAIPRDY*CSNYKKPPKSK
Trigger: TTTTGACTTTGGTGGCTTTTTGTAGTTGGAGCATCAGTAGTCTCTTGGAATTGCTCCTAGGACATTGTGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR GCA 72 bp CTCCACGTTACAAATATGACTGTCCCCTTTCTAATATaGGATGGCAGACGTCGTAATTTATGCCATCTAGAT +
Preference number: 3 (lower is better)
Translates to: LHVTNMTVPFLI*DGRRRNLCHLD
Trigger: ATCTAGATGGCATAAATTACGACGTCTGCCATCGCATATTAGAAAGGGGACAGTCATATTTGTAACGTGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR-3UTR CAA 90 bp TTAGAGAAATTGCACATTGACTACAGGGACTCACTACTAGTACAGTTCAGCGCTGCAGTGAAGTCTAAATaGAAACCATTAGCTAGAAGG +
Preference number: 3 (lower is better)
Translates to: LEKLHIDYRDSLLVQFSAAVKSK*KPLARR
Trigger: CCTTCTAGCTAATGGTTTCAATTTAGACTTCACTGC...AGCGCTGAACTGTACTAGTAGTGAGTCCCTGTAGTCAATGTGCAATTTCTCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR TCA 72 bp TTATTTGCCCAAGTATTAGGTCCCAAAAGACAAAGATaGTCCAAGATGGGCTGCCTCATACGTTATAGTTCT +
Preference number: 3 (lower is better)
Translates to: LFAQVLGPKRQR*SKMGCLIRYSS
Trigger: AGAACTATAACGTATGAGGCAGCCCATCTTGGATCATCTTTGTCTTTTGGGACCTAATACTTGGGCAAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR GCA 72 bp TATCAGAATTCCAGAACTGTATCACAAGCAGTAACATaGCATCTCCCCACTGTCAGGAAACAAATACCAAAA +
Preference number: 3 (lower is better)
Translates to: YQNSRTVSQAVT*HLPTVRKQIPK
Trigger: TTTTGGTATTTGTTTCCTGACAGTGGGGAGATGGCATGTTACTGCTTGTGATACAGTTCTGGAATTCTGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR GCA 72 bp TGGCAACTACATTATCTAGAAGTTATGGTTCTATGCTaGTTTAATACATCTACCTCTCTAGTTCAAAGCTGT +
Preference number: 3 (lower is better)
Translates to: WQLHYLEVMVLC*FNTSTSLVQSC
Trigger: ACAGCTTTGAACTAGAGAGGTAGATGTATTAAAGCAGCATAGAACCATAACTTCTAGATAATGTAGTTGCCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR GCA 72 bp ACAAAACTCCATTTCATAGATAAAGTGGCACATCTTTaGAGCTTCTATTGCACCAAGTATCGAAGATTAAAA +
Preference number: 3 (lower is better)
Translates to: TKLHFIDKVAHL*SFYCTKYRRLK
Trigger: TTTTAATCTTCGATACTTGGTGCAATAGAAGCTGCAAAGATGTGCCACTTTATCTATGAAATGGAGTTTTGT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR TCA 90 bp AGGATGAGAGCCAGGCCACAGAGAGTCTGTCCGGCAATCGCCGCCAGCCGCAAGGGGAGCCCCCGGGTGTaGCGTCTGACTCCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: RMRARPQRVCPAIAASRKGSPRV*RLTPGP
Trigger: AGGGCCAGGAGTCAGACGTCACACCCGGGGGCTCCC...CTTGCGGCTGGCGGCGATTGCCGGACAGACTCTCTGTGGCCTGGCTCTCATCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR GCA 90 bp AGGATGAGAGCCAGGCCACAGAGAGTCTGTCCGGCAATCGCCGCCAGCCGCAAGCGGCTCTTCGCCGCCTaGTTTCGGGACATGGCCTTA +
Preference number: 4 (lower is better)
Translates to: RMRARPQRVCPAIAASRKRLFAA*FRDMAL
Trigger: TAAGGCCATGTCCCGAAAGCAGGCGGCGAAGAGCCG...CTTGCGGCTGGCGGCGATTGCCGGACAGACTCTCTGTGGCCTGGCTCTCATCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR GCA 90 bp AGGATGAGAGCCAGGCCACAGAGAGTCTGTCCGGCAATCGCCGCCAGCCGCAAGACTGCTCGAGGGACCTaGCAGGGATCAAACCGCCAG +
Preference number: 4 (lower is better)
Translates to: RMRARPQRVCPAIAASRKTARGT*QGSNRQ
Trigger: CTGGCGGTTTGATCCCTGGCAGGTCCCTCGAGCAGT...CTTGCGGCTGGCGGCGATTGCCGGACAGACTCTCTGTGGCCTGGCTCTCATCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR TCA 90 bp ACCTTGGGAGAGAACTTCCAGGCCAACCACAAGGCACCGCTCTTTCCGGAGGTCGAGCAACTCCCCGACTaGAGGTGGCCCTCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: TLGENFQANHKAPLFPEVEQLPD*RWPSSH
Trigger: GTGGGAGGAGGGCCACCTTCAGTCGGGGAGTTGCTC...GACCTCCGGAAAGAGCGGTGCCTTGTGGTTGGCCTGGAAGTTCTCTCCCAAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR TCA 90 bp AGGATGAGAGCCAGGCCACAGAGAGTCTGTCCGGCAATCGCCGCCAGCCGCAAGGATCAAACCGCCAGCTaGGGTCTGTGGCTGAGCTCA +
Preference number: 4 (lower is better)
Translates to: RMRARPQRVCPAIAASRKDQTAS*GLWLSS
Trigger: TGAGCTCAGCCACAGACCTCAGCTGGCGGTTTGATC...CTTGCGGCTGGCGGCGATTGCCGGACAGACTCTCTGTGGCCTGGCTCTCATCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR TCA 90 bp ACCTTGGGAGAGAACTTCCAGGCCAACCACAAGGCACCGCTCTTTCCGGAGGTCGCTGGTTGGCGAAGCTaGCGAACTCCTCCTCGCAGC +
Preference number: 4 (lower is better)
Translates to: TLGENFQANHKAPLFPEVAGWRS*RTPPRS
Trigger: GCTGCGAGGAGGAGTTCGTCAGCTTCGCCAACCAGC...GACCTCCGGAAAGAGCGGTGCCTTGTGGTTGGCCTGGAAGTTCTCTCCCAAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR GCA 90 bp ACCTTGGGAGAGAACTTCCAGGCCAACCACAAGGCACCGCTCTTTCCGGAGGTCAGGGCTTTGTGGCGGTaGCTCTCCTCCTGCCGCTTC +
Preference number: 4 (lower is better)
Translates to: TLGENFQANHKAPLFPEVRALWR*LSSCRF
Trigger: GAAGCGGCAGGAGGAGAGGCACCGCCACAAAGCCCT...GACCTCCGGAAAGAGCGGTGCCTTGTGGTTGGCCTGGAAGTTCTCTCCCAAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR GCA 90 bp AGGATGAGAGCCAGGCCACAGAGAGTCTGTCCGGCAATCGCCGCCAGCCGCAAGTTCACCAAGGTGACCTaGGTGTTCGCCTCTGCTTCG +
Preference number: 4 (lower is better)
Translates to: RMRARPQRVCPAIAASRKFTKVT*VFASAS
Trigger: CGAAGCAGAGGCGAACACGCAGGTCACCTTGGTGAA...CTTGCGGCTGGCGGCGATTGCCGGACAGACTCTCTGTGGCCTGGCTCTCATCCT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR TCA 90 bp AGGATGAGAGCCAGGCCACAGAGAGTCTGTCCGGCAATCGCCGCCAGCCGCAAGGATCACCAAGAGCTCTaGACAAGCAATTGCCGTCCC +
Preference number: 4 (lower is better)
Translates to: RMRARPQRVCPAIAASRKDHQEL*TSNCRP
Trigger: GGGACGGCAATTGCTTGTTCAGAGCTCTTGGTGATC...CTTGCGGCTGGCGGCGATTGCCGGACAGACTCTCTGTGGCCTGGCTCTCATCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR GCA 90 bp ACCTTGGGAGAGAACTTCCAGGCCAACCACAAGGCACCGCTCTTTCCGGAGGTCGCCTCTTACCAGTACTaGTCGAGGGACCTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: TLGENFQANHKAPLFPEVASYQY*SRDLPG
Trigger: CCCTGGCAGGTCCCTCGAGCAGTACTGGTAAGAGGC...GACCTCCGGAAAGAGCGGTGCCTTGTGGTTGGCCTGGAAGTTCTCTCCCAAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR GCA 90 bp AGGATGAGAGCCAGGCCACAGAGAGTCTGTCCGGCAATCGCCGCCAGCCGCAAGCTGCGTGTTCGCCTCTaGTTCGCTTCTGTTATTGTC +
Preference number: 4 (lower is better)
Translates to: RMRARPQRVCPAIAASRKLRVRL*FASVIV
Trigger: GACAATAACAGAAGCGAAGCAGAGGCGAACACGCAG...CTTGCGGCTGGCGGCGATTGCCGGACAGACTCTCTGTGGCCTGGCTCTCATCCT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR GCA 90 bp AGGATGAGAGCCAGGCCACAGAGAGTCTGTCCGGCAATCGCCGCCAGCCGCAAGAATTTCCATCCTGACTaGAGGCCACAACCCTCACGT +
Preference number: 4 (lower is better)
Translates to: RMRARPQRVCPAIAASRKNFHPD*RPQPSR
Trigger: ACGTGAGGGTTGTGGCCTGCAGTCAGGATGGAAATT...CTTGCGGCTGGCGGCGATTGCCGGACAGACTCTCTGTGGCCTGGCTCTCATCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR GCA 90 bp AGGATGAGAGCCAGGCCACAGAGAGTCTGTCCGGCAATCGCCGCCAGCCGCAAGTCACAAGCAGTAACATaGCATCTCCCCACTGTCAGG +
Preference number: 4 (lower is better)
Translates to: RMRARPQRVCPAIAASRKSQAVT*HLPTVR
Trigger: CCTGACAGTGGGGAGATGGCATGTTACTGCTTGTGA...CTTGCGGCTGGCGGCGATTGCCGGACAGACTCTCTGTGGCCTGGCTCTCATCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR CCA 90 bp ACCTTGGGAGAGAACTTCCAGGCCAACCACAAGGCACCGCTCTTTCCGGAGGTCCATGATTGTCATGGATaGCTGGCAGCCTGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: TLGENFQANHKAPLFPEVHDCHG*LAACRR
Trigger: CCTGCGGCAGGCTGCCAGCCATCCATGACAATCATG...GACCTCCGGAAAGAGCGGTGCCTTGTGGTTGGCCTGGAAGTTCTCTCCCAAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR CCA 90 bp AGGATGAGAGCCAGGCCACAGAGAGTCTGTCCGGCAATCGCCGCCAGCCGCAAGGACTTGCTAAGTCTATaGATCACGACCCCATGGAGG +
Preference number: 4 (lower is better)
Translates to: RMRARPQRVCPAIAASRKDLLSL*ITTPWR
Trigger: CCTCCATGGGGTCGTGATCCATAGACTTAGCAAGTC...CTTGCGGCTGGCGGCGATTGCCGGACAGACTCTCTGTGGCCTGGCTCTCATCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR TCA 90 bp AGGATGAGAGCCAGGCCACAGAGAGTCTGTCCGGCAATCGCCGCCAGCCGCAAGGTCGAAGAGGGCCACTaGCGCAACACATTAAAATCA +
Preference number: 4 (lower is better)
Translates to: RMRARPQRVCPAIAASRKVEEGH*RNTLKS
Trigger: TGATTTTAATGTGTTGCGTCAGTGGCCCTCTTCGAC...CTTGCGGCTGGCGGCGATTGCCGGACAGACTCTCTGTGGCCTGGCTCTCATCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR TCA 90 bp ACCTTGGGAGAGAACTTCCAGGCCAACCACAAGGCACCGCTCTTTCCGGAGGTCGTGGCTGAGCTCACATaGTTGTCATGGATGGCTGGC +
Preference number: 4 (lower is better)
Translates to: TLGENFQANHKAPLFPEVVAELT*LSWMAG
Trigger: GCCAGCCATCCATGACAATCATGTGAGCTCAGCCAC...GACCTCCGGAAAGAGCGGTGCCTTGTGGTTGGCCTGGAAGTTCTCTCCCAAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR GCA 90 bp GATCACGACCCCATGGAGGTCTTAAGTATCTCCAGACTGAAGCTAGAACAAGTACCTCGGCTTTCCGGCTaGCGCTGCCCGGCCGGCTCT +
Preference number: 4 (lower is better)
Translates to: DHDPMEVLSISRLKLEQVPRLSG*RCPAGS
Trigger: AGAGCCGGCCGGGCAGCGGCAGCCGGAAAGCCGAGG...TACTTGTTCTAGCTTCAGTCTGGAGATACTTAAGACCTCCATGGGGTCGTGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR CCA 90 bp ACCTTGGGAGAGAACTTCCAGGCCAACCACAAGGCACCGCTCTTTCCGGAGGTCAGTGCACGTGGTGACTaGTGCTCCGTGTTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: TLGENFQANHKAPLFPEVSARGD*CSVFSP
Trigger: TGGAGAGAACACGGAGCACCAGTCACCACGTGCACT...GACCTCCGGAAAGAGCGGTGCCTTGTGGTTGGCCTGGAAGTTCTCTCCCAAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR TCA 90 bp ACCTTGGGAGAGAACTTCCAGGCCAACCACAAGGCACCGCTCTTTCCGGAGGTCAGTACAGTTCAGCGCTaGAGTCCACCTGATGCTACC +
Preference number: 4 (lower is better)
Translates to: TLGENFQANHKAPLFPEVSTVQR*SPPDAT
Trigger: GGTAGCATCAGGTGGACTTCAGCGCTGAACTGTACT...GACCTCCGGAAAGAGCGGTGCCTTGTGGTTGGCCTGGAAGTTCTCTCCCAAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR TCA 90 bp ACCTTGGGAGAGAACTTCCAGGCCAACCACAAGGCACCGCTCTTTCCGGAGGTCGCTGAGGTCTGTGGCTaGGCTCACATGATTGTCATG +
Preference number: 4 (lower is better)
Translates to: TLGENFQANHKAPLFPEVAEVCG*AHMIVM
Trigger: CATGACAATCATGTGAGCTCAGCCACAGACCTCAGC...GACCTCCGGAAAGAGCGGTGCCTTGTGGTTGGCCTGGAAGTTCTCTCCCAAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR GCA 90 bp AAATGTGTGAAGCCTCTTACCAGTACTGCTCGAGGGACCTGCCAGGGATCAAACGACATGGCCTTAGCCTaGAGTCCCCAGCGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: KCVKPLTSTARGTCQGSNDMALA*SPQRQE
Trigger: CTCCTGCCGCTGGGGACTGCAGGCTAAGGCCATGTC...GTTTGATCCCTGGCAGGTCCCTCGAGCAGTACTGGTAAGAGGCTTCACACATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR GCA 90 bp AGGATGAGAGCCAGGCCACAGAGAGTCTGTCCGGCAATCGCCGCCAGCCGCAAGGAAGGAATTTTCAAGTaGCCACTGAGGCAACTAAGC +
Preference number: 4 (lower is better)
Translates to: RMRARPQRVCPAIAASRKEGIFK*PLRQLS
Trigger: GCTTAGTTGCCTCAGTGGGCACTTGAAAATTCCTTC...CTTGCGGCTGGCGGCGATTGCCGGACAGACTCTCTGTGGCCTGGCTCTCATCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR GCA 90 bp ACCTTGGGAGAGAACTTCCAGGCCAACCACAAGGCACCGCTCTTTCCGGAGGTCGTGTGCGGTAAGCTCTaGATCCTAAGTGCACGTGGT +
Preference number: 4 (lower is better)
Translates to: TLGENFQANHKAPLFPEVVCGKL*ILSARG
Trigger: ACCACGTGCACTTAGGATGCAGAGCTTACCGCACAC...GACCTCCGGAAAGAGCGGTGCCTTGTGGTTGGCCTGGAAGTTCTCTCCCAAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR CCA 90 bp ACCTTGGGAGAGAACTTCCAGGCCAACCACAAGGCACCGCTCTTTCCGGAGGTCGTCAACCAACCCTGCTaGTCCAACAACTTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: TLGENFQANHKAPLFPEVVNQPC*SNNFQQ
Trigger: CTGCTGGAAGTTGTTGGACCAGCAGGGTTGGTTGAC...GACCTCCGGAAAGAGCGGTGCCTTGTGGTTGGCCTGGAAGTTCTCTCCCAAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR TCA 90 bp AGGATGAGAGCCAGGCCACAGAGAGTCTGTCCGGCAATCGCCGCCAGCCGCAAGACTTTTAGTCACCTCTaGCTAGGAATCCAAGTTTCC +
Preference number: 4 (lower is better)
Translates to: RMRARPQRVCPAIAASRKTFSHL*LGIQVS
Trigger: GGAAACTTGGATTCCTAGTCAGAGGTGACTAAAAGT...CTTGCGGCTGGCGGCGATTGCCGGACAGACTCTCTGTGGCCTGGCTCTCATCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR TCA 90 bp AAATGTGTGAAGCCTCTTACCAGTACTGCTCGAGGGACCTGCCAGGGATCAAACCCCGGGTGTGACGTCTaGCTCCTGGCCCTTTTCTTC +
Preference number: 4 (lower is better)
Translates to: KCVKPLTSTARGTCQGSNPGCDV*LLALFF
Trigger: GAAGAAAAGGGCCAGGAGTCAGACGTCACACCCGGG...GTTTGATCCCTGGCAGGTCCCTCGAGCAGTACTGGTAAGAGGCTTCACACATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR GCA 90 bp TTCCAACCTTCTCATGTACCCAGTGAGACTGAGGCAGTGAAGTCTAAATTGAAACTTTCCGGCTGCCGCTaGCCGGCCGGCTCTTCGCCG +
Preference number: 4 (lower is better)
Translates to: FQPSHVPSETEAVKSKLKLSGCR*PAGSSP
Trigger: CGGCGAAGAGCCGGCCGGGCAGCGGCAGCCGGAAAG...TTTCAATTTAGACTTCACTGCCTCAGTCTCACTGGGTACATGAGAAGGTTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR TCA 90 bp ACCTTGGGAGAGAACTTCCAGGCCAACCACAAGGCACCGCTCTTTCCGGAGGTCCTTGAGGTAAGAAAGTaGAGAGCTACGCATCTACCC +
Preference number: 4 (lower is better)
Translates to: TLGENFQANHKAPLFPEVLEVRK*RATHLP
Trigger: GGGTAGATGCGTAGCTCTTCACTTTCTTACCTCAAG...GACCTCCGGAAAGAGCGGTGCCTTGTGGTTGGCCTGGAAGTTCTCTCCCAAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR GCA 90 bp TTCCAACCTTCTCATGTACCCAGTGAGACTGAGGCAGTGAAGTCTAAATTGAAACCCGCTCGTCCCGCTTaGGCTCGGCCTCGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: FQPSHVPSETEAVKSKLKPARPA*ARPRLS
Trigger: GGAAAGCCGAGGCCGAGCGCAAGCGGGACGAGCGGG...TTTCAATTTAGACTTCACTGCCTCAGTCTCACTGGGTACATGAGAAGGTTGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR GCA 90 bp AGGATGAGAGCCAGGCCACAGAGAGTCTGTCCGGCAATCGCCGCCAGCCGCAAGTGCAAAGGCTACAATTaGATCATTGCCAGCAAAAGT +
Preference number: 4 (lower is better)
Translates to: RMRARPQRVCPAIAASRKCKGYN*IIASKS
Trigger: ACTTTTGCTGGCAATGATGCAATTGTAGCCTTTGCA...CTTGCGGCTGGCGGCGATTGCCGGACAGACTCTCTGTGGCCTGGCTCTCATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR GCA 90 bp AGGATGAGAGCCAGGCCACAGAGAGTCTGTCCGGCAATCGCCGCCAGCCGCAAGTATTGTTTTCGGTCCTaGCTTCATTTAAGCCCTGAT +
Preference number: 4 (lower is better)
Translates to: RMRARPQRVCPAIAASRKYCFRS*LHLSPD
Trigger: ATCAGGGCTTAAATGAAGGCAGGACCGAAAACAATA...CTTGCGGCTGGCGGCGATTGCCGGACAGACTCTCTGTGGCCTGGCTCTCATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR CCA 90 bp ACCTTGGGAGAGAACTTCCAGGCCAACCACAAGGCACCGCTCTTTCCGGAGGTCATAATAAATTACCCATaGAGAGGCTCCCTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: TLGENFQANHKAPLFPEVIINYP*RGSLPA
Trigger: GGCTGGGAGGGAGCCTCTCCATGGGTAATTTATTAT...GACCTCCGGAAAGAGCGGTGCCTTGTGGTTGGCCTGGAAGTTCTCTCCCAAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR TCA 90 bp AAATGTGTGAAGCCTCTTACCAGTACTGCTCGAGGGACCTGCCAGGGATCAAACCACTCGGGCTGCCAGTaGAGGAATTTTCAAGTGCCC +
Preference number: 4 (lower is better)
Translates to: KCVKPLTSTARGTCQGSNHSGCQ*RNFQVP
Trigger: GGGCACTTGAAAATTCCTTCACTGGCAGCCCGAGTG...GTTTGATCCCTGGCAGGTCCCTCGAGCAGTACTGGTAAGAGGCTTCACACATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR GCA 90 bp ACCTTGGGAGAGAACTTCCAGGCCAACCACAAGGCACCGCTCTTTCCGGAGGTCGCCAAACTGGCCACATaGTTCTCAAAAGGAATGTCA +
Preference number: 4 (lower is better)
Translates to: TLGENFQANHKAPLFPEVAKLAT*FSKGMS
Trigger: TGACATTCCTTTTGAGAAGCATGTGGCCAGTTTGGC...GACCTCCGGAAAGAGCGGTGCCTTGTGGTTGGCCTGGAAGTTCTCTCCCAAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR GCA 90 bp ACCTTGGGAGAGAACTTCCAGGCCAACCACAAGGCACCGCTCTTTCCGGAGGTCAAAAGTACCAGGCTTTaGCAAACTGGCCACATGCTT +
Preference number: 4 (lower is better)
Translates to: TLGENFQANHKAPLFPEVKSTRL*QTGHML
Trigger: AAGCATGTGGCCAGTTTGGCAAAGCCTGGTACTTTT...GACCTCCGGAAAGAGCGGTGCCTTGTGGTTGGCCTGGAAGTTCTCTCCCAAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR GCA 90 bp AAATGTGTGAAGCCTCTTACCAGTACTGCTCGAGGGACCTGCCAGGGATCAAACCACAAAGGGCCACACTaGTTCAGCACTCGACCACTG +
Preference number: 4 (lower is better)
Translates to: KCVKPLTSTARGTCQGSNHKGPH*FSTRPL
Trigger: CAGTGGTCGAGTGCTGAAGCAGTGTGGCCCTTTGTG...GTTTGATCCCTGGCAGGTCCCTCGAGCAGTACTGGTAAGAGGCTTCACACATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR GCA 90 bp ACCTTGGGAGAGAACTTCCAGGCCAACCACAAGGCACCGCTCTTTCCGGAGGTCGTCCCCTTTCTAATATaGGATGGCAGACGTCGTAAT +
Preference number: 4 (lower is better)
Translates to: TLGENFQANHKAPLFPEVVPFLI*DGRRRN
Trigger: ATTACGACGTCTGCCATCGCATATTAGAAAGGGGAC...GACCTCCGGAAAGAGCGGTGCCTTGTGGTTGGCCTGGAAGTTCTCTCCCAAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR GCA 90 bp TGGTGCTCCGTGTTCTCTCCACGTTACAAATATGACTGTCCCCTTTCTAATATGGGATGGCTGGCAGCCTaGCGCAGGCTGACACGCCAA +
Preference number: 4 (lower is better)
Translates to: WCSVFSPRYKYDCPLSNMGWLAA*RRLTRQ
Trigger: TTGGCGTGTCAGCCTGCGGCAGGCTGCCAGCCATCC...CATATTAGAAAGGGGACAGTCATATTTGTAACGTGGAGAGAACACGGAGCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR CCA 90 bp GATCACGACCCCATGGAGGTCTTAAGTATCTCCAGACTGAAGCTAGAACAAGTACTCTCCAGGGCTTTGTaGCGGTGCCTCTCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: DHDPMEVLSISRLKLEQVLSRAL*RCLSSC
Trigger: GCAGGAGGAGAGGCACCGCCACAAAGCCCTGGAGAG...TACTTGTTCTAGCTTCAGTCTGGAGATACTTAAGACCTCCATGGGGTCGTGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR TCA 90 bp ACCTTGGGAGAGAACTTCCAGGCCAACCACAAGGCACCGCTCTTTCCGGAGGTCGAGTTTTCCCAACTTTaGAATGCCAAACAGGGCTTA +
Preference number: 4 (lower is better)
Translates to: TLGENFQANHKAPLFPEVEFSQL*NAKQGL
Trigger: TAAGCCCTGTTTGGCATTTCAAAGTTGGGAAAACTC...GACCTCCGGAAAGAGCGGTGCCTTGTGGTTGGCCTGGAAGTTCTCTCCCAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR TCA 90 bp TTAGAGAAATTGCACATTGACTACAGGGACTCACTACTAGTACAGTTCAGCGCTCAGCCTGCCGCAGGCTaGCACGCCAAGGATGAGAGC +
Preference number: 4 (lower is better)
Translates to: LEKLHIDYRDSLLVQFSAQPAAG*HAKDES
Trigger: GCTCTCATCCTTGGCGTGTCAGCCTGCGGCAGGCTG...AGCGCTGAACTGTACTAGTAGTGAGTCCCTGTAGTCAATGTGCAATTTCTCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR GCA 90 bp ACCTTGGGAGAGAACTTCCAGGCCAACCACAAGGCACCGCTCTTTCCGGAGGTCAAAGTGGCACATCTTTaGAGCTTCTATTGCACCAAG +
Preference number: 4 (lower is better)
Translates to: TLGENFQANHKAPLFPEVKVAHL*SFYCTK
Trigger: CTTGGTGCAATAGAAGCTGCAAAGATGTGCCACTTT...GACCTCCGGAAAGAGCGGTGCCTTGTGGTTGGCCTGGAAGTTCTCTCCCAAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR GCA 90 bp TTCCAACCTTCTCATGTACCCAGTGAGACTGAGGCAGTGAAGTCTAAATTGAAATTCAGCCCCAGGGCCTaGAGCTGGTTGGCGAAGCTG +
Preference number: 4 (lower is better)
Translates to: FQPSHVPSETEAVKSKLKFSPRA*SWLAKL
Trigger: CAGCTTCGCCAACCAGCTGCAGGCCCTGGGGCTGAA...TTTCAATTTAGACTTCACTGCCTCAGTCTCACTGGGTACATGAGAAGGTTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR CCA 90 bp TTCCAACCTTCTCATGTACCCAGTGAGACTGAGGCAGTGAAGTCTAAATTGAAACCCAGGGCCTGCAGCTaGTTGGCGAAGCTGACGAAC +
Preference number: 4 (lower is better)
Translates to: FQPSHVPSETEAVKSKLKPRACS*LAKLTN
Trigger: GTTCGTCAGCTTCGCCAACCAGCTGCAGGCCCTGGG...TTTCAATTTAGACTTCACTGCCTCAGTCTCACTGGGTACATGAGAAGGTTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR CCA 90 bp GATCACGACCCCATGGAGGTCTTAAGTATCTCCAGACTGAAGCTAGAACAAGTAGAGCAGCAGCAGCTCTaGATCACGGCTATGACCTGC +
Preference number: 4 (lower is better)
Translates to: DHDPMEVLSISRLKLEQVEQQQL*ITAMTC
Trigger: GCAGGTCATAGCCGTGATCCAGAGCTGCTGCTGCTC...TACTTGTTCTAGCTTCAGTCTGGAGATACTTAAGACCTCCATGGGGTCGTGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR CCA 90 bp TTCCAACCTTCTCATGTACCCAGTGAGACTGAGGCAGTGAAGTCTAAATTGAAACTCTGGAAGAGGCACTaGGGAGGCCAAGGGCCCTTC +
Preference number: 4 (lower is better)
Translates to: FQPSHVPSETEAVKSKLKLWKRH*GGQGPF
Trigger: GAAGGGCCCTTGGCCTCCCCAGTGCCTCTTCCAGAG...TTTCAATTTAGACTTCACTGCCTCAGTCTCACTGGGTACATGAGAAGGTTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR TCA 90 bp TGGTGCTCCGTGTTCTCTCCACGTTACAAATATGACTGTCCCCTTTCTAATATGAGGTCTTCACCAAGGTaGCCTGCGTGTTCGCCTCTG +
Preference number: 4 (lower is better)
Translates to: WCSVFSPRYKYDCPLSNMRSSPR*PACSPL
Trigger: CAGAGGCGAACACGCAGGTCACCTTGGTGAAGACCT...CATATTAGAAAGGGGACAGTCATATTTGTAACGTGGAGAGAACACGGAGCACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR TCA 90 bp AAATGTGTGAAGCCTCTTACCAGTACTGCTCGAGGGACCTGCCAGGGATCAAACTACCTGTGTAATATGTaGGCAACTCCCCGACTGAAG +
Preference number: 4 (lower is better)
Translates to: KCVKPLTSTARGTCQGSNYLCNM*ATPRLK
Trigger: CTTCAGTCGGGGAGTTGCTCACATATTACACAGGTA...GTTTGATCCCTGGCAGGTCCCTCGAGCAGTACTGGTAAGAGGCTTCACACATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR TCA 90 bp AAATGTGTGAAGCCTCTTACCAGTACTGCTCGAGGGACCTGCCAGGGATCAAACCTCTGTAAAGGAGACTaGCGCATGCCAACACTTCTA +
Preference number: 4 (lower is better)
Translates to: KCVKPLTSTARGTCQGSNLCKGD*RMPTLL
Trigger: TAGAAGTGTTGGCATGCGTCAGTCTCCTTTACAGAG...GTTTGATCCCTGGCAGGTCCCTCGAGCAGTACTGGTAAGAGGCTTCACACATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR TCA 90 bp ACCTTGGGAGAGAACTTCCAGGCCAACCACAAGGCACCGCTCTTTCCGGAGGTCATAAAATGGTTCAGATaGACACAATCCGTGGAAAGA +
Preference number: 4 (lower is better)
Translates to: TLGENFQANHKAPLFPEVIKWFR*TQSVER
Trigger: TCTTTCCACGGATTGTGTTCATCTGAACCATTTTAT...GACCTCCGGAAAGAGCGGTGCCTTGTGGTTGGCCTGGAAGTTCTCTCCCAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR GCA 90 bp ACCTTGGGAGAGAACTTCCAGGCCAACCACAAGGCACCGCTCTTTCCGGAGGTCTTTGTTTGTGACCTTTaGGAGCTGGTTTTTATTTGC +
Preference number: 4 (lower is better)
Translates to: TLGENFQANHKAPLFPEVFVCDL*ELVFIC
Trigger: GCAAATAAAAACCAGCTCGCAAAGGTCACAAACAAA...GACCTCCGGAAAGAGCGGTGCCTTGTGGTTGGCCTGGAAGTTCTCTCCCAAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR GCA 90 bp TTCCAACCTTCTCATGTACCCAGTGAGACTGAGGCAGTGAAGTCTAAATTGAAACCAGCCAGCTCCAGCTaGTCCACAAGGGAGATCCCA +
Preference number: 4 (lower is better)
Translates to: FQPSHVPSETEAVKSKLKPASSS*STREIP
Trigger: TGGGATCTCCCTTGTGGAGCAGCTGGAGCTGGCTGG...TTTCAATTTAGACTTCACTGCCTCAGTCTCACTGGGTACATGAGAAGGTTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR CCA 90 bp AAATGTGTGAAGCCTCTTACCAGTACTGCTCGAGGGACCTGCCAGGGATCAAACCAGGCTTTGCCAAACTaGCCACATGCTTCTCAAAAG +
Preference number: 4 (lower is better)
Translates to: KCVKPLTSTARGTCQGSNQALPN*PHASQK
Trigger: CTTTTGAGAAGCATGTGGCCAGTTTGGCAAAGCCTG...GTTTGATCCCTGGCAGGTCCCTCGAGCAGTACTGGTAAGAGGCTTCACACATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR CCA 90 bp TTAGAGAAATTGCACATTGACTACAGGGACTCACTACTAGTACAGTTCAGCGCTGCCAACACTTCTACATaGGAAAGGGGAGCCCCCGGG +
Preference number: 4 (lower is better)
Translates to: LEKLHIDYRDSLLVQFSAANTST*ERGAPG
Trigger: CCCGGGGGCTCCCCTTTCCCATGTAGAAGTGTTGGC...AGCGCTGAACTGTACTAGTAGTGAGTCCCTGTAGTCAATGTGCAATTTCTCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR TCA 90 bp GATCACGACCCCATGGAGGTCTTAAGTATCTCCAGACTGAAGCTAGAACAAGTAATGTGCAGGTGCCTCTaGGTTGTCATTGATCCTCCG +
Preference number: 4 (lower is better)
Translates to: DHDPMEVLSISRLKLEQVMCRCL*VVIDPP
Trigger: CGGAGGATCAATGACAACTCAGAGGCACCTGCACAT...TACTTGTTCTAGCTTCAGTCTGGAGATACTTAAGACCTCCATGGGGTCGTGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR TCA 90 bp AAATGTGTGAAGCCTCTTACCAGTACTGCTCGAGGGACCTGCCAGGGATCAAACTTCAGAACTGAAGAGTaGTTCGAAGGCCTCAACCAA +
Preference number: 4 (lower is better)
Translates to: KCVKPLTSTARGTCQGSNFRTEE*FEGLNQ
Trigger: TTGGTTGAGGCCTTCGAATCACTCTTCAGTTCTGAA...GTTTGATCCCTGGCAGGTCCCTCGAGCAGTACTGGTAAGAGGCTTCACACATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR GCA 90 bp TTAGAGAAATTGCACATTGACTACAGGGACTCACTACTAGTACAGTTCAGCGCTGCACGTGGTGACTGGTaGTCCGTGTTCTCTCCACGT +
Preference number: 4 (lower is better)
Translates to: LEKLHIDYRDSLLVQFSAARGDW*SVFSPR
Trigger: ACGTGGAGAGAACACGGAGCACCAGTCACCACGTGC...AGCGCTGAACTGTACTAGTAGTGAGTCCCTGTAGTCAATGTGCAATTTCTCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR CCA 90 bp TTCCAACCTTCTCATGTACCCAGTGAGACTGAGGCAGTGAAGTCTAAATTGAAAGTCCGCCTCAAGCGTTaGGAAGGTAAAACAGCGCGG +
Preference number: 4 (lower is better)
Translates to: FQPSHVPSETEAVKSKLKVRLKR*EGKTAR
Trigger: CCGCGCTGTTTTACCTTCCCAACGCTTGAGGCGGAC...TTTCAATTTAGACTTCACTGCCTCAGTCTCACTGGGTACATGAGAAGGTTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR CCA 90 bp AAATGTGTGAAGCCTCTTACCAGTACTGCTCGAGGGACCTGCCAGGGATCAAACTTATTTCTCTTCCCTTaGTTCATCCGAAGCACGGCA +
Preference number: 4 (lower is better)
Translates to: KCVKPLTSTARGTCQGSNLFLFP*FIRSTA
Trigger: TGCCGTGCTTCGGATGAACCAAGGGAAGAGAAATAA...GTTTGATCCCTGGCAGGTCCCTCGAGCAGTACTGGTAAGAGGCTTCACACATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR CCA 90 bp ACCTTGGGAGAGAACTTCCAGGCCAACCACAAGGCACCGCTCTTTCCGGAGGTCAGCATATTCCTGAGTTaGAGATCATTTATAAGCTAC +
Preference number: 4 (lower is better)
Translates to: TLGENFQANHKAPLFPEVSIFLS*RSFISY
Trigger: GTAGCTTATAAATGATCTCCAACTCAGGAATATGCT...GACCTCCGGAAAGAGCGGTGCCTTGTGGTTGGCCTGGAAGTTCTCTCCCAAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR TCA 90 bp GATCACGACCCCATGGAGGTCTTAAGTATCTCCAGACTGAAGCTAGAACAAGTACCCAAAAGACAAAGATaGTCCAAGATGGGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: DHDPMEVLSISRLKLEQVPKRQR*SKMGCL
Trigger: GAGGCAGCCCATCTTGGATCATCTTTGTCTTTTGGG...TACTTGTTCTAGCTTCAGTCTGGAGATACTTAAGACCTCCATGGGGTCGTGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR TCA 90 bp TGGTGCTCCGTGTTCTCTCCACGTTACAAATATGACTGTCCCCTTTCTAATATGCCATCCCCTTTCTCCTaGCCACACTACAAGCTACCA +
Preference number: 4 (lower is better)
Translates to: WCSVFSPRYKYDCPLSNMPSPFS*PHYKLP
Trigger: TGGTAGCTTGTAGTGTGGTCAGGAGAAAGGGGATGG...CATATTAGAAAGGGGACAGTCATATTTGTAACGTGGAGAGAACACGGAGCACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR GCA 90 bp AAATGTGTGAAGCCTCTTACCAGTACTGCTCGAGGGACCTGCCAGGGATCAAACGTATGTTCTCTTCTCTaGTGGTCCAACCTAAGTCAA +
Preference number: 4 (lower is better)
Translates to: KCVKPLTSTARGTCQGSNVCSLL*WSNLSQ
Trigger: TTGACTTAGGTTGGACCAGCAGAGAAGAGAACATAC...GTTTGATCCCTGGCAGGTCCCTCGAGCAGTACTGGTAAGAGGCTTCACACATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR GCA 90 bp TTAGAGAAATTGCACATTGACTACAGGGACTCACTACTAGTACAGTTCAGCGCTTCCCCATCAGCGGTGTaGGGTAAGCTCTGCATCCTA +
Preference number: 4 (lower is better)
Translates to: LEKLHIDYRDSLLVQFSASPSAV*GKLCIL
Trigger: TAGGATGCAGAGCTTACCGCACACCGCTGATGGGGA...AGCGCTGAACTGTACTAGTAGTGAGTCCCTGTAGTCAATGTGCAATTTCTCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR GCA 90 bp AAATGTGTGAAGCCTCTTACCAGTACTGCTCGAGGGACCTGCCAGGGATCAAACACTCTACAAAGCAGCTaGTTCAAAGACATAGGTCAG +
Preference number: 4 (lower is better)
Translates to: KCVKPLTSTARGTCQGSNTLQSS*FKDIGQ
Trigger: CTGACCTATGTCTTTGAAGCAGCTGCTTTGTAGAGT...GTTTGATCCCTGGCAGGTCCCTCGAGCAGTACTGGTAAGAGGCTTCACACATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR CCA 90 bp AAATGTGTGAAGCCTCTTACCAGTACTGCTCGAGGGACCTGCCAGGGATCAAACACTTCCAGCAGATGCTaGAGTTTTCCCAACTTTGAA +
Preference number: 4 (lower is better)
Translates to: KCVKPLTSTARGTCQGSNTSSRC*SFPNFE
Trigger: TTCAAAGTTGGGAAAACTCCAGCATCTGCTGGAAGT...GTTTGATCCCTGGCAGGTCCCTCGAGCAGTACTGGTAAGAGGCTTCACACATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR CCA 90 bp GATCACGACCCCATGGAGGTCTTAAGTATCTCCAGACTGAAGCTAGAACAAGTAGTGATAAAGACAATCTaGCGACTCCAGGGCCTACCA +
Preference number: 4 (lower is better)
Translates to: DHDPMEVLSISRLKLEQVVIKTI*RLQGLP
Trigger: TGGTAGGCCCTGGAGTCGCCAGATTGTCTTTATCAC...TACTTGTTCTAGCTTCAGTCTGGAGATACTTAAGACCTCCATGGGGTCGTGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR CCA 90 bp AAATGTGTGAAGCCTCTTACCAGTACTGCTCGAGGGACCTGCCAGGGATCAAACATAGATTCTTTACACTaGTACCAGCCCCTTCTCAAG +
Preference number: 4 (lower is better)
Translates to: KCVKPLTSTARGTCQGSNIDSLH*YQPLLK
Trigger: CTTGAGAAGGGGCTGGTACCAGTGTAAAGAATCTAT...GTTTGATCCCTGGCAGGTCCCTCGAGCAGTACTGGTAAGAGGCTTCACACATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR TCA 90 bp TGGTGCTCCGTGTTCTCTCCACGTTACAAATATGACTGTCCCCTTTCTAATATGCAAAGAGTCAGATGTTaGGAGCGGCGAAGGTCTTCA +
Preference number: 4 (lower is better)
Translates to: WCSVFSPRYKYDCPLSNMQRVRC*ERRRSS
Trigger: TGAAGACCTTCGCCGCTCTCAACATCTGACTCTTTG...CATATTAGAAAGGGGACAGTCATATTTGTAACGTGGAGAGAACACGGAGCACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR TCA 90 bp TTAGAGAAATTGCACATTGACTACAGGGACTCACTACTAGTACAGTTCAGCGCTCACATCATTTCACACTaGAGCAGCTCCCTGGGGGAA +
Preference number: 4 (lower is better)
Translates to: LEKLHIDYRDSLLVQFSAHIISH*SSSLGE
Trigger: TTCCCCCAGGGAGCTGCTTCAGTGTGAAATGATGTG...AGCGCTGAACTGTACTAGTAGTGAGTCCCTGTAGTCAATGTGCAATTTCTCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR GCA 90 bp GATCACGACCCCATGGAGGTCTTAAGTATCTCCAGACTGAAGCTAGAACAAGTATTCTTCTCCATCCACTaGTGTTCTCGCCTCTGTTTG +
Preference number: 4 (lower is better)
Translates to: DHDPMEVLSISRLKLEQVFFSIH*CSRLCL
Trigger: CAAACAGAGGCGAGAACAGCAGTGGATGGAGAAGAA...TACTTGTTCTAGCTTCAGTCTGGAGATACTTAAGACCTCCATGGGGTCGTGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR GCA 90 bp AAATGTGTGAAGCCTCTTACCAGTACTGCTCGAGGGACCTGCCAGGGATCAAACATCACTGAAGTTGGATaGATGTACCCGATTCCTAAT +
Preference number: 4 (lower is better)
Translates to: KCVKPLTSTARGTCQGSNITEVG*MYPIPN
Trigger: ATTAGGAATCGGGTACATGCATCCAACTTCAGTGAT...GTTTGATCCCTGGCAGGTCCCTCGAGCAGTACTGGTAAGAGGCTTCACACATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR CCA 90 bp TTCCAACCTTCTCATGTACCCAGTGAGACTGAGGCAGTGAAGTCTAAATTGAAACTGTTATTGTCCCTGTaGCTACCTCTGCTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: FQPSHVPSETEAVKSKLKLLLSL*LPLLSR
Trigger: CCTGGAGAGCAGAGGTAGCCACAGGGACAATAACAG...TTTCAATTTAGACTTCACTGCCTCAGTCTCACTGGGTACATGAGAAGGTTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR CCA 90 bp TGGTGCTCCGTGTTCTCTCCACGTTACAAATATGACTGTCCCCTTTCTAATATGCTTTCTGAGAGGATCTaGCCTCTGCACTCAAGCAGT +
Preference number: 4 (lower is better)
Translates to: WCSVFSPRYKYDCPLSNMLSERI*PLHSSS
Trigger: ACTGCTTGAGTGCAGAGGCCAGATCCTCTCAGAAAG...CATATTAGAAAGGGGACAGTCATATTTGTAACGTGGAGAGAACACGGAGCACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR TCA 90 bp TTAGAGAAATTGCACATTGACTACAGGGACTCACTACTAGTACAGTTCAGCGCTGAGTGTCCCTCCAATTaGTCACCAAGAGCTCTGAAC +
Preference number: 4 (lower is better)
Translates to: LEKLHIDYRDSLLVQFSAECPSN*SPRALN
Trigger: GTTCAGAGCTCTTGGTGATCAATTGGAGGGACACTC...AGCGCTGAACTGTACTAGTAGTGAGTCCCTGTAGTCAATGTGCAATTTCTCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR TCA 90 bp TTCCAACCTTCTCATGTACCCAGTGAGACTGAGGCAGTGAAGTCTAAATTGAAACCTCTGAGTTGTCATTaGTCCTCCGAACACTGTCGT +
Preference number: 4 (lower is better)
Translates to: FQPSHVPSETEAVKSKLKPLSCH*SSEHCR
Trigger: ACGACAGTGTTCGGAGGATCAATGACAACTCAGAGG...TTTCAATTTAGACTTCACTGCCTCAGTCTCACTGGGTACATGAGAAGGTTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR TCA 90 bp TTCCAACCTTCTCATGTACCCAGTGAGACTGAGGCAGTGAAGTCTAAATTGAAAGCGCTGAAGTCCACCTaGTGCTACCTGTGTAATATG +
Preference number: 4 (lower is better)
Translates to: FQPSHVPSETEAVKSKLKALKST*CYLCNM
Trigger: CATATTACACAGGTAGCATCAGGTGGACTTCAGCGC...TTTCAATTTAGACTTCACTGCCTCAGTCTCACTGGGTACATGAGAAGGTTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR TCA 90 bp TATAATTCTGAAATGCGAGGGGTGGGGAAGATAACTAATAATTTACCTTTCAACCTGACACGCCAAGGATaGGAGCCAGGCCACAGAGAG +
Preference number: 4 (lower is better)
Translates to: YNSEMRGVGKITNNLPFNLTRQG*EPGHRE
Trigger: CTCTCTGTGGCCTGGCTCTCATCCTTGGCGTGTCAG...GTTGAAAGGTAAATTATTAGTTATCTTCCCCACCCCTCGCATTTCAGAATTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR GCA 90 bp TTCCAACCTTCTCATGTACCCAGTGAGACTGAGGCAGTGAAGTCTAAATTGAAAACTAGGGCTGGCCTGTaGCTTATTGTTTTCGGTCCT +
Preference number: 4 (lower is better)
Translates to: FQPSHVPSETEAVKSKLKTRAGL*LIVFGP
Trigger: AGGACCGAAAACAATAAGGCACAGGCCAGCCCTAGT...TTTCAATTTAGACTTCACTGCCTCAGTCTCACTGGGTACATGAGAAGGTTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR CCA 90 bp TTCCAACCTTCTCATGTACCCAGTGAGACTGAGGCAGTGAAGTCTAAATTGAAATCAGCACTCGACCACTaGGCTCAAGATTCTCTTCTG +
Preference number: 4 (lower is better)
Translates to: FQPSHVPSETEAVKSKLKSALDH*AQDSLL
Trigger: CAGAAGAGAATCTTGAGCCCAGTGGTCGAGTGCTGA...TTTCAATTTAGACTTCACTGCCTCAGTCTCACTGGGTACATGAGAAGGTTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR CCA 90 bp AAATGTGTGAAGCCTCTTACCAGTACTGCTCGAGGGACCTGCCAGGGATCAAACGAATCAAACTGGCATTaGAAGTGTTTTCAGAGCTTA +
Preference number: 4 (lower is better)
Translates to: KCVKPLTSTARGTCQGSNESNWH*KCFQSL
Trigger: TAAGCTCTGAAAACACTTCCAATGCCAGTTTGATTC...GTTTGATCCCTGGCAGGTCCCTCGAGCAGTACTGGTAAGAGGCTTCACACATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR TCA 90 bp TTCCAACCTTCTCATGTACCCAGTGAGACTGAGGCAGTGAAGTCTAAATTGAAATCTCCTGTCTGTGCTTaGGATGATTTCGTGAGTGTC +
Preference number: 4 (lower is better)
Translates to: FQPSHVPSETEAVKSKLKSPVCA*DDFVSV
Trigger: GACACTCACGAAATCATCTCAAGCACAGACAGGAGA...TTTCAATTTAGACTTCACTGCCTCAGTCTCACTGGGTACATGAGAAGGTTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR TCA 90 bp TTAGAGAAATTGCACATTGACTACAGGGACTCACTACTAGTACAGTTCAGCGCTGCCTCTGTTTGTTTGTaGCCTTTGCGAGCTGGTTTT +
Preference number: 4 (lower is better)
Translates to: LEKLHIDYRDSLLVQFSAASVCL*PLRAGF
Trigger: AAAACCAGCTCGCAAAGGTCACAAACAAACAGAGGC...AGCGCTGAACTGTACTAGTAGTGAGTCCCTGTAGTCAATGTGCAATTTCTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR TCA 90 bp TGGTGCTCCGTGTTCTCTCCACGTTACAAATATGACTGTCCCCTTTCTAATATGCACCTGCATCCCATCTaGAATAACATCAGAATCAGG +
Preference number: 4 (lower is better)
Translates to: WCSVFSPRYKYDCPLSNMHLHPI*NNIRIR
Trigger: CCTGATTCTGATGTTATTTCAGATGGGATGCAGGTG...CATATTAGAAAGGGGACAGTCATATTTGTAACGTGGAGAGAACACGGAGCACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR TCA 90 bp TTCCAACCTTCTCATGTACCCAGTGAGACTGAGGCAGTGAAGTCTAAATTGAAAGATAGCATTCTATGCTaGCCCAGTAAAACCCAGGCA +
Preference number: 4 (lower is better)
Translates to: FQPSHVPSETEAVKSKLKDSILC*PSKTQA
Trigger: TGCCTGGGTTTTACTGGGTCAGCATAGAATGCTATC...TTTCAATTTAGACTTCACTGCCTCAGTCTCACTGGGTACATGAGAAGGTTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR TCA 90 bp TATAATTCTGAAATGCGAGGGGTGGGGAAGATAACTAATAATTTACCTTTCAACCCTAAGTGCACGTGGTaGCTGGTGCTCCGTGTTCTC +
Preference number: 4 (lower is better)
Translates to: YNSEMRGVGKITNNLPFNPKCTW*LVLRVL
Trigger: GAGAACACGGAGCACCAGTCACCACGTGCACTTAGG...GTTGAAAGGTAAATTATTAGTTATCTTCCCCACCCCTCGCATTTCAGAATTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR GCA 90 bp TTAGAGAAATTGCACATTGACTACAGGGACTCACTACTAGTACAGTTCAGCGCTAGCCAGTCAGGAATCTaGCCAGAGTTGAAAACCAAG +
Preference number: 4 (lower is better)
Translates to: LEKLHIDYRDSLLVQFSASQSGI*PELKTK
Trigger: CTTGGTTTTCAACTCTGGGCAGATTCCTGACTGGCT...AGCGCTGAACTGTACTAGTAGTGAGTCCCTGTAGTCAATGTGCAATTTCTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR GCA 90 bp TTAGAGAAATTGCACATTGACTACAGGGACTCACTACTAGTACAGTTCAGCGCTAGAGGATCTGGCCTCTaGACTCAAGCAGTACAAAAC +
Preference number: 4 (lower is better)
Translates to: LEKLHIDYRDSLLVQFSARGSGL*TQAVQN
Trigger: GTTTTGTACTGCTTGAGTGCAGAGGCCAGATCCTCT...AGCGCTGAACTGTACTAGTAGTGAGTCCCTGTAGTCAATGTGCAATTTCTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR TCA 90 bp TTAGAGAAATTGCACATTGACTACAGGGACTCACTACTAGTACAGTTCAGCGCTCTTGAGATGATTTCGTaGGTGTCCCTCCAATTGATC +
Preference number: 4 (lower is better)
Translates to: LEKLHIDYRDSLLVQFSALEMIS*VSLQLI
Trigger: GATCAATTGGAGGGACACTCACGAAATCATCTCAAG...AGCGCTGAACTGTACTAGTAGTGAGTCCCTGTAGTCAATGTGCAATTTCTCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
3UTR CAA 72 bp TCCATCCTGACTGCAGGCCACAACCCTCACGTAACTTaGGGAAAACAATTCCTGAATTATTTTCTGAGTAAC +
Preference number: 4 (lower is better)
Translates to: SILTAGHNPHVT*GKQFLNYFLSN
Trigger: GTTACTCAGAAAATAATTCAGGAATTGTTTTCCCAAAGTTACGTGAGGGTTGTGGCCTGCAGTCAGGATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR TCA 90 bp TTCCAACCTTCTCATGTACCCAGTGAGACTGAGGCAGTGAAGTCTAAATTGAAAAGGGTCACTGAAGTCTaGTTTTCAGGGCAAATAAAG +
Preference number: 4 (lower is better)
Translates to: FQPSHVPSETEAVKSKLKRVTEV*FSGQIK
Trigger: CTTTATTTGCCCTGAAAATCAGACTTCAGTGACCCT...TTTCAATTTAGACTTCACTGCCTCAGTCTCACTGGGTACATGAGAAGGTTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR TCA 90 bp TTCCAACCTTCTCATGTACCCAGTGAGACTGAGGCAGTGAAGTCTAAATTGAAATACCACGTATCTCTCTaGAGGCATCTAAGTCTACAA +
Preference number: 4 (lower is better)
Translates to: FQPSHVPSETEAVKSKLKYHVSL*RHLSLQ
Trigger: TTGTAGACTTAGATGCCTTCAGAGAGATACGTGGTA...TTTCAATTTAGACTTCACTGCCTCAGTCTCACTGGGTACATGAGAAGGTTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR TCA 90 bp TTCCAACCTTCTCATGTACCCAGTGAGACTGAGGCAGTGAAGTCTAAATTGAAAAGAGAAATTGCACATTaGCTACAGGGACTCACTACT +
Preference number: 4 (lower is better)
Translates to: FQPSHVPSETEAVKSKLKREIAH*LQGLTT
Trigger: AGTAGTGAGTCCCTGTAGTCAATGTGCAATTTCTCT...TTTCAATTTAGACTTCACTGCCTCAGTCTCACTGGGTACATGAGAAGGTTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR GCA 90 bp GATCACGACCCCATGGAGGTCTTAAGTATCTCCAGACTGAAGCTAGAACAAGTATACAACTATAGACCCTaGTCTACACACTATCAGAAT +
Preference number: 4 (lower is better)
Translates to: DHDPMEVLSISRLKLEQVYNYRP*STHYQN
Trigger: ATTCTGATAGTGTGTAGAGCAGGGTCTATAGTTGTA...TACTTGTTCTAGCTTCAGTCTGGAGATACTTAAGACCTCCATGGGGTCGTGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR GCA 90 bp GATCACGACCCCATGGAGGTCTTAAGTATCTCCAGACTGAAGCTAGAACAAGTATCAGCATCAATTATTTaGCCAAGTATTAGGTCCCAA +
Preference number: 4 (lower is better)
Translates to: DHDPMEVLSISRLKLEQVSASII*PSIRSQ
Trigger: TTGGGACCTAATACTTGGGCAAATAATTGATGCTGA...TACTTGTTCTAGCTTCAGTCTGGAGATACTTAAGACCTCCATGGGGTCGTGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR GCA 90 bp TATAATTCTGAAATGCGAGGGGTGGGGAAGATAACTAATAATTTACCTTTCAACAGCAGTAAGCAGCTATaGACCACTGCTCCATCCCCT +
Preference number: 4 (lower is better)
Translates to: YNSEMRGVGKITNNLPFNSSKQL*TTAPSP
Trigger: AGGGGATGGAGCAGTGGTGCATAGCTGCTTACTGCT...GTTGAAAGGTAAATTATTAGTTATCTTCCCCACCCCTCGCATTTCAGAATTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR GCA 90 bp TGGTGCTCCGTGTTCTCTCCACGTTACAAATATGACTGTCCCCTTTCTAATATGCAACTGATGATTTCTTaGAAAGGCTACAATTGCATC +
Preference number: 4 (lower is better)
Translates to: WCSVFSPRYKYDCPLSNMQLMIS*KGYNCI
Trigger: GATGCAATTGTAGCCTTTGCAAGAAATCATCAGTTG...CATATTAGAAAGGGGACAGTCATATTTGTAACGTGGAGAGAACACGGAGCACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR GCA 90 bp GATCACGACCCCATGGAGGTCTTAAGTATCTCCAGACTGAAGCTAGAACAAGTATATGAATGGCCTCACTaGATTTTCATAAAACACCAA +
Preference number: 4 (lower is better)
Translates to: DHDPMEVLSISRLKLEQVYEWPH*IFIKHQ
Trigger: TTGGTGTTTTATGAAAATGCAGTGAGGCCATTCATA...TACTTGTTCTAGCTTCAGTCTGGAGATACTTAAGACCTCCATGGGGTCGTGATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR CCA 90 bp TTCCAACCTTCTCATGTACCCAGTGAGACTGAGGCAGTGAAGTCTAAATTGAAATCTAAAGATTTAACATaGCTAGACAGAGCCTTGAGG +
Preference number: 4 (lower is better)
Translates to: FQPSHVPSETEAVKSKLKSKDLT*LDRALR
Trigger: CCTCAAGGCTCTGTCTAGCCATGTTAAATCTTTAGA...TTTCAATTTAGACTTCACTGCCTCAGTCTCACTGGGTACATGAGAAGGTTGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR TCA 90 bp TATAATTCTGAAATGCGAGGGGTGGGGAAGATAACTAATAATTTACCTTTCAACGCTAGAAGGTATCACTaGAGTTGGATGCATGTACCC +
Preference number: 4 (lower is better)
Translates to: YNSEMRGVGKITNNLPFNARRYH*SWMHVP
Trigger: GGGTACATGCATCCAACTTCAGTGATACCTTCTAGC...GTTGAAAGGTAAATTATTAGTTATCTTCCCCACCCCTCGCATTTCAGAATTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR GCA 90 bp TATAATTCTGAAATGCGAGGGGTGGGGAAGATAACTAATAATTTACCTTTCAACGTAACTCCCTCACGCTaGTTTTCTCTGTACCACGAA +
Preference number: 4 (lower is better)
Translates to: YNSEMRGVGKITNNLPFNVTPSR*FSLYHE
Trigger: TTCGTGGTACAGAGAAAAGCAGCGTGAGGGAGTTAC...GTTGAAAGGTAAATTATTAGTTATCTTCCCCACCCCTCGCATTTCAGAATTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR GCA 90 bp TATAATTCTGAAATGCGAGGGGTGGGGAAGATAACTAATAATTTACCTTTCAACAAGGAGACTGACGCATaGCAACACTTCTACATGGGA +
Preference number: 4 (lower is better)
Translates to: YNSEMRGVGKITNNLPFNKETDA*QHFYMG
Trigger: TCCCATGTAGAAGTGTTGGCATGCGTCAGTCTCCTT...GTTGAAAGGTAAATTATTAGTTATCTTCCCCACCCCTCGCATTTCAGAATTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR GCA 90 bp TTAGAGAAATTGCACATTGACTACAGGGACTCACTACTAGTACAGTTCAGCGCTCTTTGCAGCTTCTATTaGACCAAGTATCGAAGATTA +
Preference number: 4 (lower is better)
Translates to: LEKLHIDYRDSLLVQFSALCSFY*TKYRRL
Trigger: TAATCTTCGATACTTGGTGCAATAGAAGCTGCAAAG...AGCGCTGAACTGTACTAGTAGTGAGTCCCTGTAGTCAATGTGCAATTTCTCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR CCA 90 bp TATAATTCTGAAATGCGAGGGGTGGGGAAGATAACTAATAATTTACCTTTCAACAGGGGGAAGGAACTATaGACATCAGACAATGGTCAC +
Preference number: 4 (lower is better)
Translates to: YNSEMRGVGKITNNLPFNRGKEL*TSDNGH
Trigger: GTGACCATTGTCTGATGTCCATAGTTCCTTCCCCCT...GTTGAAAGGTAAATTATTAGTTATCTTCCCCACCCCTCGCATTTCAGAATTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR TCA 90 bp TATAATTCTGAAATGCGAGGGGTGGGGAAGATAACTAATAATTTACCTTTCAACACAATCTTATCTTTCTaGGAGGATCTGGCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: YNSEMRGVGKITNNLPFNTILSF*EDLASA
Trigger: TGCAGAGGCCAGATCCTCTCAGAAAGATAAGATTGT...GTTGAAAGGTAAATTATTAGTTATCTTCCCCACCCCTCGCATTTCAGAATTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR TCA 90 bp TATAATTCTGAAATGCGAGGGGTGGGGAAGATAACTAATAATTTACCTTTCAACCCTTCATTTAAGCCCTaGTTTCCAAAGATTCTGGCA +
Preference number: 4 (lower is better)
Translates to: YNSEMRGVGKITNNLPFNPSFKP*FPKILA
Trigger: TGCCAGAATCTTTGGAAATCAGGGCTTAAATGAAGG...GTTGAAAGGTAAATTATTAGTTATCTTCCCCACCCCTCGCATTTCAGAATTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR TCA 90 bp TATAATTCTGAAATGCGAGGGGTGGGGAAGATAACTAATAATTTACCTTTCAACTGTCTATTTCAGAACTaGAGAGTGATTCGAAGGCCT +
Preference number: 4 (lower is better)
Translates to: YNSEMRGVGKITNNLPFNCLFQN*RVIRRP
Trigger: AGGCCTTCGAATCACTCTTCAGTTCTGAAATAGACA...GTTGAAAGGTAAATTATTAGTTATCTTCCCCACCCCTCGCATTTCAGAATTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR GCA 90 bp TATAATTCTGAAATGCGAGGGGTGGGGAAGATAACTAATAATTTACCTTTCAACCTACAATTGCATCATTaGCAGCAAAAGTACCAGGCT +
Preference number: 4 (lower is better)
Translates to: YNSEMRGVGKITNNLPFNLQLHH*QQKYQA
Trigger: AGCCTGGTACTTTTGCTGGCAATGATGCAATTGTAG...GTTGAAAGGTAAATTATTAGTTATCTTCCCCACCCCTCGCATTTCAGAATTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR CCA 90 bp TATAATTCTGAAATGCGAGGGGTGGGGAAGATAACTAATAATTTACCTTTCAACATGGACATCAGACAATaGTCACAATTCTCACCATCG +
Preference number: 4 (lower is better)
Translates to: YNSEMRGVGKITNNLPFNMDIRQ*SQFSPS
Trigger: CGATGGTGAGAATTGTGACCATTGTCTGATGTCCAT...GTTGAAAGGTAAATTATTAGTTATCTTCCCCACCCCTCGCATTTCAGAATTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR TCA 90 bp TATAATTCTGAAATGCGAGGGGTGGGGAAGATAACTAATAATTTACCTTTCAACATTCCAAGAGACTACTaGTGCTCCAACTACAAAAAG +
Preference number: 4 (lower is better)
Translates to: YNSEMRGVGKITNNLPFNIPRDY*CSNYKK
Trigger: CTTTTTGTAGTTGGAGCATCAGTAGTCTCTTGGAAT...GTTGAAAGGTAAATTATTAGTTATCTTCCCCACCCCTCGCATTTCAGAATTATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR GCA 90 bp TATAATTCTGAAATGCGAGGGGTGGGGAAGATAACTAATAATTTACCTTTCAACCTCAAGATTCTCTTCTaGATTATTTCTCTTCCCTTG +
Preference number: 4 (lower is better)
Translates to: YNSEMRGVGKITNNLPFNLKILF*IISLPL
Trigger: CAAGGGAAGAGAAATAATGCAGAAGAGAATCTTGAG...GTTGAAAGGTAAATTATTAGTTATCTTCCCCACCCCTCGCATTTCAGAATTATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR GCA 90 bp TATAATTCTGAAATGCGAGGGGTGGGGAAGATAACTAATAATTTACCTTTCAACGAAGTTATGGTTCTATaGTGCTTTAATACATCTACC +
Preference number: 4 (lower is better)
Translates to: YNSEMRGVGKITNNLPFNEVMVL*CFNTST
Trigger: GGTAGATGTATTAAAGCAGCATAGAACCATAACTTC...GTTGAAAGGTAAATTATTAGTTATCTTCCCCACCCCTCGCATTTCAGAATTATA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS GCA 90 bp GCGCCGCCCGCTCGTCCCGCTTGCGCTCGGCCTCGGCTTTCCGGCTaGCGCTGCCCGGCCGGCTCTTCGCCGCCTGCTTTCGGGACATGG +
Preference number: 5 (lower is better)
Translates to: APPARPACARPRLSG*RCPAGSSPPAFGTW
Trigger: CCATGTCCCGAAAGCAGGCGGCGAAGAGCCGGCCGGGCAGCGGCAGCCGGAAAGCCGAGGCCGAGCGCAAGCGGGACGAGCGGGCGGCGC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS CCA 90 bp CCGTCCCCCGGCACCTCCCGCAGCTTCAGCCCCAGGGCCTGCAGCTaGTTGGCGAAGCTGACGAACTCCTCCTCGCAGCCGCCGCCGCCG +
Preference number: 5 (lower is better)
Translates to: PSPGTSRSFSPRACS*LAKLTNSSSQPPPP
Trigger: CGGCGGCGGCGGCTGCGAGGAGGAGTTCGTCAGCTTCGCCAACCAGCTGCAGGCCCTGGGGCTGAAGCTGCGGGAGGTGCCGGGGGACGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS GCA 90 bp GCCTCGGCTTTCCGGCTGCCGCTGCCCGGCCGGCTCTTCGCCGCCTaGTTTCGGGACATGGCCTTAGCCTGCAGTCCCCAGCGGCAGGAG +
Preference number: 5 (lower is better)
Translates to: ASAFRLPLPGRLFAA*FRDMALACSPQRQE
Trigger: CTCCTGCCGCTGGGGACTGCAGGCTAAGGCCATGTCCCGAAAGCAGGCGGCGAAGAGCCGGCCGGGCAGCGGCAGCCGGAAAGCCGAGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS GCA 90 bp CAATTGCCGTCCCCCGGCACCTCCCGCAGCTTCAGCCCCAGGGCCTaGAGCTGGTTGGCGAAGCTGACGAACTCCTCCTCGCAGCCGCCG +
Preference number: 5 (lower is better)
Translates to: QLPSPGTSRSFSPRA*SWLAKLTNSSSQPP
Trigger: CGGCGGCTGCGAGGAGGAGTTCGTCAGCTTCGCCAACCAGCTGCAGGCCCTGGGGCTGAAGCTGCGGGAGGTGCCGGGGGACGGCAATTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS CCA 90 bp GTGACCTGCGTGTTCGCCTCTGCTTCGCTTCTGTTATTGTCCCTGTaGCTACCTCTGCTCTCCAGGGCTTTGTGGCGGTGCCTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: VTCVFASASLLLLSL*LPLLSRALWRCLSS
Trigger: GGAGGAGAGGCACCGCCACAAAGCCCTGGAGAGCAGAGGTAGCCACAGGGACAATAACAGAAGCGAAGCAGAGGCGAACACGCAGGTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS GCA 90 bp GAGAGCGGCGAAGGTCTTCACCAAGGTGACCTGCGTGTTCGCCTCTaGTTCGCTTCTGTTATTGTCCCTGTGGCTACCTCTGCTCTCCAG +
Preference number: 5 (lower is better)
Translates to: ESGEGLHQGDLRVRL*FASVIVPVATSALQ
Trigger: CTGGAGAGCAGAGGTAGCCACAGGGACAATAACAGAAGCGAAGCAGAGGCGAACACGCAGGTCACCTTGGTGAAGACCTTCGCCGCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS CCA 90 bp GGGCGGGGAATACGGGAGAAATCCGAGGCCTCACTCACATCCGTCTaGAGATGTGCAGGTGCCTCTGAGTTGTCATTGATCCTCCGAACA +
Preference number: 5 (lower is better)
Translates to: GRGIREKSEASLTSV*RCAGASELSLILRT
Trigger: TGTTCGGAGGATCAATGACAACTCAGAGGCACCTGCACATCTCCAGACGGATGTGAGTGAGGCCTCGGATTTCTCCCGTATTCCCCGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466697.1
CDS-3UTR CAA 90 bp ACCTTGGGAGAGAACTTCCAGGCCAACCACAAGGCACCGCTCTTTCCGGAGGTCGCCTCTGAGTTGTCATaGATCCTCCGAACACTGTCG +
Preference number: 5 (lower is better)
Translates to: TLGENFQANHKAPLFPEVASELS*ILRTLS
Trigger: CGACAGTGTTCGGAGGATCAATGACAACTCAGAGGC...GACCTCCGGAAAGAGCGGTGCCTTGTGGTTGGCCTGGAAGTTCTCTCCCAAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR CAA 90 bp AGGATGAGAGCCAGGCCACAGAGAGTCTGTCCGGCAATCGCCGCCAGCCGCAAGCATGTGTGGGCTTCGTaGGTTGTGTTGCGTTTTATA +
Preference number: 5 (lower is better)
Translates to: RMRARPQRVCPAIAASRKHVWAS*VVLRFI
Trigger: TATAAAACGCAACACAACCAACGAAGCCCACACATG...CTTGCGGCTGGCGGCGATTGCCGGACAGACTCTCTGTGGCCTGGCTCTCATCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR CAA 90 bp TTCCAACCTTCTCATGTACCCAGTGAGACTGAGGCAGTGAAGTCTAAATTGAAAGCCCGCTCGTCCCGCTaGCGCTCGGCCTCGGCTTTC +
Preference number: 5 (lower is better)
Translates to: FQPSHVPSETEAVKSKLKARSSR*RSASAF
Trigger: GAAAGCCGAGGCCGAGCGCAAGCGGGACGAGCGGGC...TTTCAATTTAGACTTCACTGCCTCAGTCTCACTGGGTACATGAGAAGGTTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS GCA 90 bp AAGATTCTGGCACCACTGCCACCCTCCTCCCACAAAGGGCCACACTaGTTCAGCACTCGACCACTGGGCTCAAGATTCTCTTCTGCATTA +
Preference number: 5 (lower is better)
Translates to: KILAPLPPSSHKGPH*FSTRPLGSRFSSAL
Trigger: TAATGCAGAAGAGAATCTTGAGCCCAGTGGTCGAGTGCTGAAGCAGTGTGGCCCTTTGTGGGAGGAGGGTGGCAGTGGTGCCAGAATCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR CAA 90 bp AGGATGAGAGCCAGGCCACAGAGAGTCTGTCCGGCAATCGCCGCCAGCCGCAAGGCAGTGAAGTCTAAATaGAAACCATTAGCTAGAAGG +
Preference number: 5 (lower is better)
Translates to: RMRARPQRVCPAIAASRKAVKSK*KPLARR
Trigger: CCTTCTAGCTAATGGTTTCAATTTAGACTTCACTGC...CTTGCGGCTGGCGGCGATTGCCGGACAGACTCTCTGTGGCCTGGCTCTCATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR CAA 90 bp AGGATGAGAGCCAGGCCACAGAGAGTCTGTCCGGCAATCGCCGCCAGCCGCAAGTCTTTGCAGCTTCTATaGCACCAAGTATCGAAGATT +
Preference number: 5 (lower is better)
Translates to: RMRARPQRVCPAIAASRKSLQLL*HQVSKI
Trigger: AATCTTCGATACTTGGTGCAATAGAAGCTGCAAAGA...CTTGCGGCTGGCGGCGATTGCCGGACAGACTCTCTGTGGCCTGGCTCTCATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS TCA 90 bp ATCCGAGGCCTCACTCACATCCGTCTGGAGATGTGCAGGTGCCTCTaGGTTGTCATTGATCCTCCGAACACTGTCGTAGTGCTCTCCATA +
Preference number: 5 (lower is better)
Translates to: IRGLTHIRLEMCRCL*VVIDPPNTVVVLSI
Trigger: TATGGAGAGCACTACGACAGTGTTCGGAGGATCAATGACAACTCAGAGGCACCTGCACATCTCCAGACGGATGTGAGTGAGGCCTCGGAT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466697.1
CDS GCA 90 bp AAGAGTCAGATGTTGAGAGCGGCGAAGGTCTTCACCAAGGTGACCTaGGTGTTCGCCTCTGCTTCGCTTCTGTTATTGTCCCTGTGGCTA +
Preference number: 5 (lower is better)
Translates to: KSQMLRAAKVFTKVT*VFASASLLLLSLWL
Trigger: TAGCCACAGGGACAATAACAGAAGCGAAGCAGAGGCGAACACGCAGGTCACCTTGGTGAAGACCTTCGCCGCTCTCAACATCTGACTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS TCA 90 bp CACTCACATCCGTCTGGAGATGTGCAGGTGCCTCTGAGTTGTCATTaGTCCTCCGAACACTGTCGTAGTGCTCTCCATACCGATATGCGA +
Preference number: 5 (lower is better)
Translates to: HSHPSGDVQVPLSCH*SSEHCRSALHTDMR
Trigger: TCGCATATCGGTATGGAGAGCACTACGACAGTGTTCGGAGGATCAATGACAACTCAGAGGCACCTGCACATCTCCAGACGGATGTGAGTG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466697.1
CDS CCA 90 bp TGTTTTCGGTCCTGCCTTCATTTAAGCCCTGATTTCCAAAGATTCTaGCACCACTGCCACCCTCCTCCCACAAAGGGCCACACTGCTTCA +
Preference number: 5 (lower is better)
Translates to: CFRSCLHLSPDFQRF*HHCHPPPTKGHTAS
Trigger: TGAAGCAGTGTGGCCCTTTGTGGGAGGAGGGTGGCAGTGGTGCCAGAATCTTTGGAAATCAGGGCTTAAATGAAGGCAGGACCGAAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR CAA 90 bp AAATGTGTGAAGCCTCTTACCAGTACTGCTCGAGGGACCTGCCAGGGATCAAACGCAGGTGCCTCTGAGTaGTCATTGATCCTCCGAACA +
Preference number: 5 (lower is better)
Translates to: KCVKPLTSTARGTCQGSNAGASE*SLILRT
Trigger: TGTTCGGAGGATCAATGACAACTCAGAGGCACCTGC...GTTTGATCCCTGGCAGGTCCCTCGAGCAGTACTGGTAAGAGGCTTCACACATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR CAA 90 bp TTCCAACCTTCTCATGTACCCAGTGAGACTGAGGCAGTGAAGTCTAAATTGAAACTGCTCTCCAGGGCTTaGTGGCGGTGCCTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: FQPSHVPSETEAVKSKLKLLSRA*WRCLSS
Trigger: GGAGGAGAGGCACCGCCACAAAGCCCTGGAGAGCAG...TTTCAATTTAGACTTCACTGCCTCAGTCTCACTGGGTACATGAGAAGGTTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR CAA 90 bp TGGTGCTCCGTGTTCTCTCCACGTTACAAATATGACTGTCCCCTTTCTAATATGTGCAGTGAGCCGAGATaGCCCCACCACACTCCAGCC +
Preference number: 5 (lower is better)
Translates to: WCSVFSPRYKYDCPLSNMCSEPR*PHHTPA
Trigger: GGCTGGAGTGTGGTGGGGCAATCTCGGCTCACTGCA...CATATTAGAAAGGGGACAGTCATATTTGTAACGTGGAGAGAACACGGAGCACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS TCA 90 bp CTGGCCTGTGCCTTATTGTTTTCGGTCCTGCCTTCATTTAAGCCCTaGTTTCCAAAGATTCTGGCACCACTGCCACCCTCCTCCCACAAA +
Preference number: 5 (lower is better)
Translates to: LACALLFSVLPSFKP*FPKILAPLPPSSHK
Trigger: TTTGTGGGAGGAGGGTGGCAGTGGTGCCAGAATCTTTGGAAATCAGGGCTTAAATGAAGGCAGGACCGAAAACAATAAGGCACAGGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR CAA 90 bp AAATGTGTGAAGCCTCTTACCAGTACTGCTCGAGGGACCTGCCAGGGATCAAACTGTTCTCGCCTCTGTTaGTTTGTGACCTTTGCGAGC +
Preference number: 5 (lower is better)
Translates to: KCVKPLTSTARGTCQGSNCSRLC*FVTFAS
Trigger: GCTCGCAAAGGTCACAAACAAACAGAGGCGAGAACA...GTTTGATCCCTGGCAGGTCCCTCGAGCAGTACTGGTAAGAGGCTTCACACATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR CAA 90 bp ACCTTGGGAGAGAACTTCCAGGCCAACCACAAGGCACCGCTCTTTCCGGAGGTCAACCCTCACGTAACTTaGGGAAAACAATTCCTGAAT +
Preference number: 5 (lower is better)
Translates to: TLGENFQANHKAPLFPEVNPHVT*GKQFLN
Trigger: ATTCAGGAATTGTTTTCCCAAAGTTACGTGAGGGTT...GACCTCCGGAAAGAGCGGTGCCTTGTGGTTGGCCTGGAAGTTCTCTCCCAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR CAA 90 bp ACCTTGGGAGAGAACTTCCAGGCCAACCACAAGGCACCGCTCTTTCCGGAGGTCTCAGAATTAGAGAAATaGCACATTGACTACAGGGAC +
Preference number: 5 (lower is better)
Translates to: TLGENFQANHKAPLFPEVSELEK*HIDYRD
Trigger: GTCCCTGTAGTCAATGTGCAATTTCTCTAATTCTGA...GACCTCCGGAAAGAGCGGTGCCTTGTGGTTGGCCTGGAAGTTCTCTCCCAAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS TCA 90 bp TCTGAAAATCCGTCTGGAGATGTGCAGGTGCCTCTGAGTTGTCATTaGTCCTCCGAACACTGTCGTAGTGCTCTCCATACCGATATGCGA +
Preference number: 5 (lower is better)
Translates to: SENPSGDVQVPLSCH*SSEHCRSALHTDMR
Trigger: TCGCATATCGGTATGGAGAGCACTACGACAGTGTTCGGAGGATCAATGACAACTCAGAGGCACCTGCACATCTCCAGACGGATTTTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR CAA 90 bp ACCTTGGGAGAGAACTTCCAGGCCAACCACAAGGCACCGCTCTTTCCGGAGGTCTCAACTGATGATTTCTaGCAAAGGCTACAATTGCAT +
Preference number: 5 (lower is better)
Translates to: TLGENFQANHKAPLFPEVSTDDF*QRLQLH
Trigger: ATGCAATTGTAGCCTTTGCAAGAAATCATCAGTTGA...GACCTCCGGAAAGAGCGGTGCCTTGTGGTTGGCCTGGAAGTTCTCTCCCAAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR CAA 90 bp GATCACGACCCCATGGAGGTCTTAAGTATCTCCAGACTGAAGCTAGAACAAGTACTGGCCTGTGCCTTATaGTTTTCGGTCCTGCCTTCA +
Preference number: 5 (lower is better)
Translates to: DHDPMEVLSISRLKLEQVLACAL*FSVLPS
Trigger: TGAAGGCAGGACCGAAAACAATAAGGCACAGGCCAG...TACTTGTTCTAGCTTCAGTCTGGAGATACTTAAGACCTCCATGGGGTCGTGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS TCA 90 bp TTGATGAAGCATCTGAAAATCCGTCTGGAGATGTGCAGGTGCCTCTaGGTTGTCATTGATCCTCCGAACACTGTCGTAGTGCTCTCCATA +
Preference number: 5 (lower is better)
Translates to: LMKHLKIRLEMCRCL*VVIDPPNTVVVLSI
Trigger: TATGGAGAGCACTACGACAGTGTTCGGAGGATCAATGACAACTCAGAGGCACCTGCACATCTCCAGACGGATTTTCAGATGCTTCATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR CAA 90 bp TTAGAGAAATTGCACATTGACTACAGGGACTCACTACTAGTACAGTTCAGCGCTGCTTCGCTTCTGTTATaGTCCCTGTGGCTACCTCTG +
Preference number: 5 (lower is better)
Translates to: LEKLHIDYRDSLLVQFSAASLLL*SLWLPL
Trigger: CAGAGGTAGCCACAGGGACAATAACAGAAGCGAAGC...AGCGCTGAACTGTACTAGTAGTGAGTCCCTGTAGTCAATGTGCAATTTCTCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR CAA 90 bp TTAGAGAAATTGCACATTGACTACAGGGACTCACTACTAGTACAGTTCAGCGCTCCAAAGAGTCAGATGTaGAGAGCGGCGAAGGTCTTC +
Preference number: 5 (lower is better)
Translates to: LEKLHIDYRDSLLVQFSAPKSQM*RAAKVF
Trigger: GAAGACCTTCGCCGCTCTCAACATCTGACTCTTTGG...AGCGCTGAACTGTACTAGTAGTGAGTCCCTGTAGTCAATGTGCAATTTCTCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR CAA 90 bp TGGTGCTCCGTGTTCTCTCCACGTTACAAATATGACTGTCCCCTTTCTAATATGGCTACAATTGCATCATaGCCAGCAAAAGTACCAGGC +
Preference number: 5 (lower is better)
Translates to: WCSVFSPRYKYDCPLSNMATIAS*PAKVPG
Trigger: GCCTGGTACTTTTGCTGGCAATGATGCAATTGTAGC...CATATTAGAAAGGGGACAGTCATATTTGTAACGTGGAGAGAACACGGAGCACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR CAA 90 bp GATCACGACCCCATGGAGGTCTTAAGTATCTCCAGACTGAAGCTAGAACAAGTAGGAGTTTTCCCAACTTaGAAATGCCAAACAGGGCTT +
Preference number: 5 (lower is better)
Translates to: DHDPMEVLSISRLKLEQVGVFPT*KCQTGL
Trigger: AAGCCCTGTTTGGCATTTCAAAGTTGGGAAAACTCC...TACTTGTTCTAGCTTCAGTCTGGAGATACTTAAGACCTCCATGGGGTCGTGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR CAA 90 bp AAATGTGTGAAGCCTCTTACCAGTACTGCTCGAGGGACCTGCCAGGGATCAAACTTTCTCAACCATACTTaGCTCCTGAAAGTGTATGTT +
Preference number: 5 (lower is better)
Translates to: KCVKPLTSTARGTCQGSNFLNHT*LLKVYV
Trigger: AACATACACTTTCAGGAGCAAAGTATGGTTGAGAAA...GTTTGATCCCTGGCAGGTCCCTCGAGCAGTACTGGTAAGAGGCTTCACACATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR CAA 90 bp TTCCAACCTTCTCATGTACCCAGTGAGACTGAGGCAGTGAAGTCTAAATTGAAACCCGCAGAGATCCTTTaGGTCAGGGTAACTTTTAGT +
Preference number: 5 (lower is better)
Translates to: FQPSHVPSETEAVKSKLKPAEIL*VRVTFS
Trigger: ACTAAAAGTTACCCTGACCAAAAGGATCTCTGCGGG...TTTCAATTTAGACTTCACTGCCTCAGTCTCACTGGGTACATGAGAAGGTTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS GCA 90 bp CTACATTCAACTGATGATTTCTTGCAAAGGCTACAATTGCATCATTaGCAGCAAAAGTACCAGGCTTTGCCAAACTGGCCACATGCTTCT +
Preference number: 5 (lower is better)
Translates to: LHSTDDFLQRLQLHH*QQKYQALPNWPHAS
Trigger: AGAAGCATGTGGCCAGTTTGGCAAAGCCTGGTACTTTTGCTGGCAATGATGCAATTGTAGCCTTTGCAAGAAATCATCAGTTGAATGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375120.4
ENST00000466697.1
CDS-3UTR CAA 90 bp TTAGAGAAATTGCACATTGACTACAGGGACTCACTACTAGTACAGTTCAGCGCTAAGGTATCACTGAAGTaGGATGCATGTACCCGATTC +
Preference number: 5 (lower is better)
Translates to: LEKLHIDYRDSLLVQFSAKVSLK*DACTRF
Trigger: GAATCGGGTACATGCATCCAACTTCAGTGATACCTT...AGCGCTGAACTGTACTAGTAGTGAGTCCCTGTAGTCAATGTGCAATTTCTCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS GCA 90 bp ATGAATCACTACATTCAACTGATGATTTCTTGCAAAGGCTACAATTaGATCATTGCCAGCAAAAGTACCAGGCTTTGCCAAACTGGCCAC +
Preference number: 5 (lower is better)
Translates to: MNHYIQLMISCKGYN*IIASKSTRLCQTGH
Trigger: GTGGCCAGTTTGGCAAAGCCTGGTACTTTTGCTGGCAATGATGCAATTGTAGCCTTTGCAAGAAATCATCAGTTGAATGTAGTGATTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375120.4
ENST00000466697.1
CDS-3UTR CAA 90 bp TATAATTCTGAAATGCGAGGGGTGGGGAAGATAACTAATAATTTACCTTTCAACCAAAAGTACCAGGCTTaGCCAAACTGGCCACATGCT +
Preference number: 5 (lower is better)
Translates to: YNSEMRGVGKITNNLPFNQKYQA*PNWPHA
Trigger: AGCATGTGGCCAGTTTGGCAAAGCCTGGTACTTTTG...GTTGAAAGGTAAATTATTAGTTATCTTCCCCACCCCTCGCATTTCAGAATTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR CAA 90 bp TGGTGCTCCGTGTTCTCTCCACGTTACAAATATGACTGTCCCCTTTCTAATATGAATCTGAACATCCAGTaGCATTACAAACTTTCTGGA +
Preference number: 5 (lower is better)
Translates to: WCSVFSPRYKYDCPLSNMNLNIQ*HYKLSG
Trigger: TCCAGAAAGTTTGTAATGCAACTGGATGTTCAGATT...CATATTAGAAAGGGGACAGTCATATTTGTAACGTGGAGAGAACACGGAGCACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR CAA 90 bp TTAGAGAAATTGCACATTGACTACAGGGACTCACTACTAGTACAGTTCAGCGCTAGAATCAAACTGGCATaGGAAGTGTTTTCAGAGCTT +
Preference number: 5 (lower is better)
Translates to: LEKLHIDYRDSLLVQFSARIKLA*EVFSEL
Trigger: AAGCTCTGAAAACACTTCCAATGCCAGTTTGATTCT...AGCGCTGAACTGTACTAGTAGTGAGTCCCTGTAGTCAATGTGCAATTTCTCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS GCA 90 bp AGGGGCATTAAGTTGATGAATCACTACATTCAACTGATGATTTCTTaGAAAGGCTACAATTGCATCATTGCCAGCAAAAGTACCAGGCTT +
Preference number: 5 (lower is better)
Translates to: RGIKLMNHYIQLMIS*KGYNCIIASKSTRL
Trigger: AAGCCTGGTACTTTTGCTGGCAATGATGCAATTGTAGCCTTTGCAAGAAATCATCAGTTGAATGTAGTGATTCATCAACTTAATGCCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375120.4
ENST00000466697.1
CDS-3UTR CAA 90 bp TTCCAACCTTCTCATGTACCCAGTGAGACTGAGGCAGTGAAGTCTAAATTGAAACAAAGGGGCATTAAGTaGATGAATCACTACATTCAA +
Preference number: 5 (lower is better)
Translates to: FQPSHVPSETEAVKSKLKQRGIK*MNHYIQ
Trigger: TTGAATGTAGTGATTCATCAACTTAATGCCCCTTTG...TTTCAATTTAGACTTCACTGCCTCAGTCTCACTGGGTACATGAGAAGGTTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS-3UTR CAA 90 bp TATAATTCTGAAATGCGAGGGGTGGGGAAGATAACTAATAATTTACCTTTCAACAGGCAACTAAGCATGTaGATTCCAACCTTCTCATGT +
Preference number: 5 (lower is better)
Translates to: YNSEMRGVGKITNNLPFNRQLSM*IPTFSC
Trigger: ACATGAGAAGGTTGGAATCAACATGCTTAGTTGCCT...GTTGAAAGGTAAATTATTAGTTATCTTCCCCACCCCTCGCATTTCAGAATTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS GCA 72 bp GCTCGTCCCGCTTGCGCTCGGCCTCGGCTTTCCGGCTaGCGCTGCCCGGCCGGCTCTTCGCCGCCTGCTTTC +
Preference number: 6 (lower is better)
Translates to: ARPACARPRLSG*RCPAGSSPPAF
Trigger: GAAAGCAGGCGGCGAAGAGCCGGCCGGGCAGCGGCAGCCGGAAAGCCGAGGCCGAGCGCAAGCGGGACGAGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS GCA 72 bp TTCCGGCTGCCGCTGCCCGGCCGGCTCTTCGCCGCCTaGTTTCGGGACATGGCCTTAGCCTGCAGTCCCCAG +
Preference number: 6 (lower is better)
Translates to: FRLPLPGRLFAA*FRDMALACSPQ
Trigger: CTGGGGACTGCAGGCTAAGGCCATGTCCCGAAAGCAGGCGGCGAAGAGCCGGCCGGGCAGCGGCAGCCGGAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS GCA 72 bp GCACCACTGCCACCCTCCTCCCACAAAGGGCCACACTaGTTCAGCACTCGACCACTGGGCTCAAGATTCTCT +
Preference number: 6 (lower is better)
Translates to: APLPPSSHKGPH*FSTRPLGSRFS
Trigger: AGAGAATCTTGAGCCCAGTGGTCGAGTGCTGAAGCAGTGTGGCCCTTTGTGGGAGGAGGGTGGCAGTGGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS CAA 90 bp TTCACCAAGGTGACCTGCGTGTTCGCCTCTGCTTCGCTTCTGTTATaGTCCCTGTGGCTACCTCTGCTCTCCAGGGCTTTGTGGCGGTGC +
Preference number: 6 (lower is better)
Translates to: FTKVTCVFASASLLL*SLWLPLLSRALWRC
Trigger: GCACCGCCACAAAGCCCTGGAGAGCAGAGGTAGCCACAGGGACAATAACAGAAGCGAAGCAGAGGCGAACACGCAGGTCACCTTGGTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS CCA 72 bp GTGTTCGCCTCTGCTTCGCTTCTGTTATTGTCCCTGTaGCTACCTCTGCTCTCCAGGGCTTTGTGGCGGTGC +
Preference number: 6 (lower is better)
Translates to: VFASASLLLLSL*LPLLSRALWRC
Trigger: GCACCGCCACAAAGCCCTGGAGAGCAGAGGTAGCCACAGGGACAATAACAGAAGCGAAGCAGAGGCGAACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS CAA 72 bp TTATTGTCCCTGTGGCTACCTCTGCTCTCCAGGGCTTaGTGGCGGTGCCTCTCCTCCTGCCGCTTCTTCTTC +
Preference number: 6 (lower is better)
Translates to: LLSLWLPLLSRA*WRCLSSCRFFF
Trigger: GAAGAAGAAGCGGCAGGAGGAGAGGCACCGCCACAAAGCCCTGGAGAGCAGAGGTAGCCACAGGGACAATAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS TCA 72 bp TTCGTGAGTGTCCCTCCAATTGATCACCAAGAGCTCTaGACAAGCAATTGCCGTCCCCCGGCACCTCCCGCA +
Preference number: 6 (lower is better)
Translates to: FVSVPPIDHQEL*TSNCRPPAPPA
Trigger: TGCGGGAGGTGCCGGGGGACGGCAATTGCTTGTTCAGAGCTCTTGGTGATCAATTGGAGGGACACTCACGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS CAA 90 bp TTCCAGCCGCTTCTTACAACTCCCAAGAGGCCAAAGAGTCAGATGTaGAGAGCGGCGAAGGTCTTCACCAAGGTGACCTGCGTGTTCGCC +
Preference number: 6 (lower is better)
Translates to: FQPLLTTPKRPKSQM*RAAKVFTKVTCVFA
Trigger: GGCGAACACGCAGGTCACCTTGGTGAAGACCTTCGCCGCTCTCAACATCTGACTCTTTGGCCTCTTGGGAGTTGTAAGAAGCGGCTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS TCA 72 bp CCGTCTGGAGATGTGCAGGTGCCTCTGAGTTGTCATTaGTCCTCCGAACACTGTCGTAGTGCTCTCCATACC +
Preference number: 6 (lower is better)
Translates to: PSGDVQVPLSCH*SSEHCRSALHT
Trigger: GGTATGGAGAGCACTACGACAGTGTTCGGAGGATCAATGACAACTCAGAGGCACCTGCACATCTCCAGACGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375120.4
ENST00000466697.1
CDS GCA 72 bp GAAGGTCTTCACCAAGGTGACCTGCGTGTTCGCCTCTaGTTCGCTTCTGTTATTGTCCCTGTGGCTACCTCT +
Preference number: 6 (lower is better)
Translates to: EGLHQGDLRVRL*FASVIVPVATS
Trigger: AGAGGTAGCCACAGGGACAATAACAGAAGCGAAGCAGAGGCGAACACGCAGGTCACCTTGGTGAAGACCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS GCA 72 bp ATGTTGAGAGCGGCGAAGGTCTTCACCAAGGTGACCTaGGTGTTCGCCTCTGCTTCGCTTCTGTTATTGTCC +
Preference number: 6 (lower is better)
Translates to: MLRAAKVFTKVT*VFASASLLLLS
Trigger: GGACAATAACAGAAGCGAAGCAGAGGCGAACACGCAGGTCACCTTGGTGAAGACCTTCGCCGCTCTCAACAT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS TCA 72 bp CTCACTCACATCCGTCTGGAGATGTGCAGGTGCCTCTaGGTTGTCATTGATCCTCCGAACACTGTCGTAGTG +
Preference number: 6 (lower is better)
Translates to: LTHIRLEMCRCL*VVIDPPNTVVV
Trigger: CACTACGACAGTGTTCGGAGGATCAATGACAACTCAGAGGCACCTGCACATCTCCAGACGGATGTGAGTGAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466697.1
CDS CCA 72 bp ATACGGGAGAAATCCGAGGCCTCACTCACATCCGTCTaGAGATGTGCAGGTGCCTCTGAGTTGTCATTGATC +
Preference number: 6 (lower is better)
Translates to: IREKSEASLTSV*RCAGASELSLI
Trigger: GATCAATGACAACTCAGAGGCACCTGCACATCTCCAGACGGATGTGAGTGAGGCCTCGGATTTCTCCCGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466697.1
CDS CAA 72 bp CTTCTTACAACTCCCAAGAGGCCAAAGAGTCAGATGTaGAGAGCGGCGAAGGTCTTCACCAAGGTGACCTGC +
Preference number: 6 (lower is better)
Translates to: LLTTPKRPKSQM*RAAKVFTKVTC
Trigger: GCAGGTCACCTTGGTGAAGACCTTCGCCGCTCTCAACATCTGACTCTTTGGCCTCTTGGGAGTTGTAAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS GCA 72 bp CTCCATACCGATATGCGATGTGTAACTCCCTCACGCTaGTTTTCTCTGTACCACGAATCTGCCACAAAGGGG +
Preference number: 6 (lower is better)
Translates to: LHTDMRCVTPSR*FSLYHESATKG
Trigger: CCCCTTTGTGGCAGATTCGTGGTACAGAGAAAAGCAGCGTGAGGGAGTTACACATCGCATATCGGTATGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375120.4
ENST00000466697.1
CDS CCA 72 bp CCCACAAAGGGCCACACTGCTTCAGCACTCGACCACTaGGCTCAAGATTCTCTTCTGCATTATTTCTCTTCC +
Preference number: 6 (lower is better)
Translates to: PTKGHTASALDH*AQDSLLHYFSS
Trigger: GGAAGAGAAATAATGCAGAAGAGAATCTTGAGCCCAGTGGTCGAGTGCTGAAGCAGTGTGGCCCTTTGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS TCA 72 bp CATCTGAAAATCCGTCTGGAGATGTGCAGGTGCCTCTaGGTTGTCATTGATCCTCCGAACACTGTCGTAGTG +
Preference number: 6 (lower is better)
Translates to: HLKIRLEMCRCL*VVIDPPNTVVV
Trigger: CACTACGACAGTGTTCGGAGGATCAATGACAACTCAGAGGCACCTGCACATCTCCAGACGGATTTTCAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS TCA 72 bp GCCTTATTGTTTTCGGTCCTGCCTTCATTTAAGCCCTaGTTTCCAAAGATTCTGGCACCACTGCCACCCTCC +
Preference number: 6 (lower is better)
Translates to: ALLFSVLPSFKP*FPKILAPLPPS
Trigger: GGAGGGTGGCAGTGGTGCCAGAATCTTTGGAAATCAGGGCTTAAATGAAGGCAGGACCGAAAACAATAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS TCA 72 bp GTCCACTGTCTCCTGTCTGTGCTTGAGATGATTTCGTaGGTGTCCCTCCAATTGATCACCAAGAGCTCTGAA +
Preference number: 6 (lower is better)
Translates to: VHCLLSVLEMIS*VSLQLITKSSE
Trigger: TTCAGAGCTCTTGGTGATCAATTGGAGGGACACTCACGAAATCATCTCAAGCACAGACAGGAGACAGTGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375120.4
CDS GCA 72 bp TACAATTGCATCATTGCCAGCAAAAGTACCAGGCTTTaGCAAACTGGCCACATGCTTCTCAAAAGGAATGTC +
Preference number: 6 (lower is better)
Translates to: YNCIIASKSTRL*QTGHMLLKRNV
Trigger: GACATTCCTTTTGAGAAGCATGTGGCCAGTTTGGCAAAGCCTGGTACTTTTGCTGGCAATGATGCAATTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375120.4
ENST00000466697.1
CDS GCA 72 bp ACTGATGATTTCTTGCAAAGGCTACAATTGCATCATTaGCAGCAAAAGTACCAGGCTTTGCCAAACTGGCCA +
Preference number: 6 (lower is better)
Translates to: TDDFLQRLQLHH*QQKYQALPNWP
Trigger: TGGCCAGTTTGGCAAAGCCTGGTACTTTTGCTGGCAATGATGCAATTGTAGCCTTTGCAAGAAATCATCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375120.4
ENST00000466697.1
CDS CAA 90 bp GCCCACATGTACAGTAATGTTAGGTGGGAAAAGGAGGCTTTTCATTaGTACACTGAGGACAATTTCAGGGTGTATTTCCTTCCAACTGTC +
Preference number: 6 (lower is better)
Translates to: AHMYSNVRWEKEAFH*YTEDNFRVYFLPTV
Trigger: GACAGTTGGAAGGAAATACACCCTGAAATTGTCCTCAGTGTACAAATGAAAAGCCTCCTTTTCCCACCTAACATTACTGTACATGTGGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481686.1