Pregenerated sensors for OTOR (Homo sapiens)
Ensembl gene IDs: ENSG00000125879Ensembl transcript IDs: ENST00000246081.3, ENST00000486129.1, ENST00000490148.1
Found 48 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCTAGCTCGTGGGCAGACCAGGCCAGCAGGAAACAAGATTTGAGTTaGAAATCCTCTTTTATCTGCCACCTCCAACCCCTAAGCCCTTGC | + |
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Preference number: 1 (lower is better) Translates to: SSSWADQASRKQDLS*KSSFICHLQPLSPC Trigger: GCAAGGGCTTAGGGGTTGGAGGTGGCAGATAAAAGAGGATTTTCAACTCAAATCTTGTTTCCTGCTGGCCTGGTCTGCCCACGAGCTAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000246081.3 |
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| 3UTR-3UTR CCA 90 bp | CACAAAACCTGCATCCTCCTCAGATTTCTTGATATATCACACTTGACTAGAGGACCCCGCTCTAGCTCGTaGGCAGACCAGGCCAGCAGG | + |
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Preference number: 2 (lower is better) Translates to: HKTCILLRFLDISHLTRGPRSSS*ADQASR Trigger: CCTGCTGGCCTGGTCTGCCCACGAGCTAGAGCGGGG...TCCTCTAGTCAAGTGTGATATATCAAGAAATCTGAGGAGGATGCAGGTTTTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000246081.3 |
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| 3UTR-3UTR GCA 90 bp | TACACATACATGATCTGTTATATGCATCCCCCTGTAAGAGGAGATTCTCTAGGTAAATCCTCTTTTATCTaGCACCTCCAACCCCTAAGC | + |
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Preference number: 2 (lower is better) Translates to: YTYMICYMHPPVRGDSLGKSSFI*HLQPLS Trigger: GCTTAGGGGTTGGAGGTGGCAGATAAAAGAGGATTT...ACCTAGAGAATCTCCTCTTACAGGGGGATGCATATAACAGATCATGTATGTGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000246081.3 |
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| 3UTR-3UTR CCA 90 bp | TGGGCCCATCAGGACCACAAAACCTGCATCCTCCTCAGATTTCTTGATATATCATCATCCAAACATCTATaGGTCCAAAAACTCTTCTTC | + |
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Preference number: 2 (lower is better) Translates to: WAHQDHKTCILLRFLDISSSKHL*VQKLFF Trigger: GAAGAAGAGTTTTTGGACCCATAGATGTTTGGATGA...TGATATATCAAGAAATCTGAGGAGGATGCAGGTTTTGTGGTCCTGATGGGCCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000246081.3 |
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| 3UTR-3UTR TCA 90 bp | CACAAAACCTGCATCCTCCTCAGATTTCTTGATATATCACACTTGACTAGAGGAGGGGGAGAAGTAAATTaGTCATTTAGAAGGCAAGTT | + |
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Preference number: 2 (lower is better) Translates to: HKTCILLRFLDISHLTRGGGEVN*SFRRQV Trigger: AACTTGCCTTCTAAATGATCAATTTACTTCTCCCCC...TCCTCTAGTCAAGTGTGATATATCAAGAAATCTGAGGAGGATGCAGGTTTTGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000246081.3 |
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| 3UTR-3UTR TCA 90 bp | CACAAAACCTGCATCCTCCTCAGATTTCTTGATATATCACACTTGACTAGAGGAATAACTACACATACATaGTCTGTTATATGCATCCCC | + |
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Preference number: 2 (lower is better) Translates to: HKTCILLRFLDISHLTRGITTHT*SVICIP Trigger: GGGGATGCATATAACAGATCATGTATGTGTAGTTAT...TCCTCTAGTCAAGTGTGATATATCAAGAAATCTGAGGAGGATGCAGGTTTTGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000246081.3 |
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| 3UTR CCA 72 bp | ACCCATTTGAGCTCAACATTTCCCCGCTCTAGCTCGTaGGCAGACCAGGCCAGCAGGAAACAAGATTTGAGT | + |
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Preference number: 3 (lower is better) Translates to: THLSSTFPRSSS*ADQASRKQDLS Trigger: ACTCAAATCTTGTTTCCTGCTGGCCTGGTCTGCCCACGAGCTAGAGCGGGGAAATGTTGAGCTCAAATGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000246081.3 |
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| 3UTR-3UTR CAA 90 bp | TACACATACATGATCTGTTATATGCATCCCCCTGTAAGAGGAGATTCTCTAGGTCCAACCCCTAAGCCCTaGCTCTTCTGTAAGGTAACA | + |
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Preference number: 3 (lower is better) Translates to: YTYMICYMHPPVRGDSLGPTPKP*LFCKVT Trigger: TGTTACCTTACAGAAGAGCAAGGGCTTAGGGGTTGG...ACCTAGAGAATCTCCTCTTACAGGGGGATGCATATAACAGATCATGTATGTGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000246081.3 |
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| CDS-3UTR CCA 90 bp | GGGCCCATCAGGACCACAAAACCTGCATCCTCCTCAGATTTCTTGATATATCACCCCCGCTCTAGCTCGTaGGCAGACCAGGCCAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: GPIRTTKPASSSDFLIYHPRSSS*ADQASR Trigger: CCTGCTGGCCTGGTCTGCCCACGAGCTAGAGCGGGG...GTGATATATCAAGAAATCTGAGGAGGATGCAGGTTTTGTGGTCCTGATGGGCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000246081.3 |
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| CDS-3UTR CCA 90 bp | ACCCATTTGAGCTCAACATTTCCCCGCTCTAGCTCGTGGGCAGACCAGGCCAGCTCCTTGGTAGCTTCCTaGTACACACGCTGTTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: THLSSTFPRSSSWADQASSLVAS*YTRCSL Trigger: CAAGGAACAGCGTGTGTACCAGGAAGCTACCAAGGA...GCTGGCCTGGTCTGCCCACGAGCTAGAGCGGGGAAATGTTGAGCTCAAATGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000246081.3 |
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| CDS-3UTR TCA 90 bp | ACCCATTTGAGCTCAACATTTCCCCGCTCTAGCTCGTGGGCAGACCAGGCCAGCCTCAATTTACCCATTTaGGCTCAACATTTCCCCGCT | + |
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Preference number: 4 (lower is better) Translates to: THLSSTFPRSSSWADQASLNLPI*AQHFPA Trigger: AGCGGGGAAATGTTGAGCTCAAATGGGTAAATTGAG...GCTGGCCTGGTCTGCCCACGAGCTAGAGCGGGGAAATGTTGAGCTCAAATGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000246081.3 |
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| CDS-3UTR TCA 90 bp | ACCCATTTGAGCTCAACATTTCCCCGCTCTAGCTCGTGGGCAGACCAGGCCAGCGGGGGAGAAGTAAATTaGTCATTTAGAAGGCAAGTT | + |
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Preference number: 4 (lower is better) Translates to: THLSSTFPRSSSWADQASGGEVN*SFRRQV Trigger: AACTTGCCTTCTAAATGATCAATTTACTTCTCCCCC...GCTGGCCTGGTCTGCCCACGAGCTAGAGCGGGGAAATGTTGAGCTCAAATGGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000246081.3 |
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| CDS-3UTR CCA 90 bp | ACCCATTTGAGCTCAACATTTCCCCGCTCTAGCTCGTGGGCAGACCAGGCCAGCTCATCCAAACATCTATaGGTCCAAAAACTCTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: THLSSTFPRSSSWADQASSSKHL*VQKLFF Trigger: GAAGAAGAGTTTTTGGACCCATAGATGTTTGGATGA...GCTGGCCTGGTCTGCCCACGAGCTAGAGCGGGGAAATGTTGAGCTCAAATGGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000246081.3 |
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| CDS-3UTR GCA 90 bp | GGGCCCATCAGGACCACAAAACCTGCATCCTCCTCAGATTTCTTGATATATCACGACACACTCATCATCTaGACAGAGCTTCTTGGAAGC | + |
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Preference number: 4 (lower is better) Translates to: GPIRTTKPASSSDFLIYHDTLII*TELLGS Trigger: GCTTCCAAGAAGCTCTGTGCAGATGATGAGTGTGTC...GTGATATATCAAGAAATCTGAGGAGGATGCAGGTTTTGTGGTCCTGATGGGCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000246081.3 |
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| CDS-3UTR TCA 90 bp | ATTTTCTGGTCTCAATTTACCCATTTGAGCTCAACATTTCCCCGCTCTAGCTCGACACACGCTGTTCCTTaGCCAAGTTCCTGGGGAAAT | + |
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Preference number: 4 (lower is better) Translates to: IFWSQFTHLSSTFPRSSSTHAVP*PSSWGN Trigger: ATTTCCCCAGGAACTTGGTCAAGGAACAGCGTGTGT...CGAGCTAGAGCGGGGAAATGTTGAGCTCAAATGGGTAAATTGAGACCAGAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000246081.3 |
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| CDS-3UTR GCA 90 bp | GGGCCCATCAGGACCACAAAACCTGCATCCTCCTCAGATTTCTTGATATATCACCATCACCATAAACACTaGCAGCCCAAAATTCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: GPIRTTKPASSSDFLIYHHHHKH*QPKILQ Trigger: CTGGAGAATTTTGGGCTGGCAGTGTTTATGGTGATG...GTGATATATCAAGAAATCTGAGGAGGATGCAGGTTTTGTGGTCCTGATGGGCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000246081.3 |
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| CDS-3UTR GCA 90 bp | ATTTTCTGGTCTCAATTTACCCATTTGAGCTCAACATTTCCCCGCTCTAGCTCGCAGGACCACAAAACCTaGATCCTCCTCAGATTTCTT | + |
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Preference number: 4 (lower is better) Translates to: IFWSQFTHLSSTFPRSSSQDHKT*ILLRFL Trigger: AAGAAATCTGAGGAGGATGCAGGTTTTGTGGTCCTG...CGAGCTAGAGCGGGGAAATGTTGAGCTCAAATGGGTAAATTGAGACCAGAAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000246081.3 |
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| CDS-3UTR TCA 90 bp | TGGGCCCATCAGGACCACAAAACCTGCATCCTCCTCAGATTTCTTGATATATCATTCTTTTACCAGCTTTaGGTACACATAGATCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: WAHQDHKTCILLRFLDISFFYQL*VHIDLL Trigger: CAGCAGATCTATGTGTACTCAAAGCTGGTAAAAGAA...TGATATATCAAGAAATCTGAGGAGGATGCAGGTTTTGTGGTCCTGATGGGCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000246081.3 |
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| CDS-3UTR TCA 90 bp | CACAAAACCTGCATCCTCCTCAGATTTCTTGATATATCACACTTGACTAGAGGATTTTCTGTTTTAACTTaGACTCTGACTGGAAGCGGG | + |
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Preference number: 4 (lower is better) Translates to: HKTCILLRFLDISHLTRGFSVLT*TLTGSG Trigger: CCCGCTTCCAGTCAGAGTTCAAGTTAAAACAGAAAA...TCCTCTAGTCAAGTGTGATATATCAAGAAATCTGAGGAGGATGCAGGTTTTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000246081.3 |
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| CDS-3UTR TCA 90 bp | GACATCATCCAAACATCTATGGGTCCAAAAACTCTTCTTCCCCCAACAGCTTTAATAACTACACATACATaGTCTGTTATATGCATCCCC | + |
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Preference number: 4 (lower is better) Translates to: DIIQTSMGPKTLLPPTALITTHT*SVICIP Trigger: GGGGATGCATATAACAGATCATGTATGTGTAGTTAT...TAAAGCTGTTGGGGGAAGAAGAGTTTTTGGACCCATAGATGTTTGGATGATGTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000246081.3 |
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| CDS-3UTR GCA 90 bp | GGTCTTTTGATGACTTGCAGCTTGAATAATATCCAGCAAGGATACATATTAAGGAAATCCTCTTTTATCTaGCACCTCCAACCCCTAAGC | + |
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Preference number: 4 (lower is better) Translates to: GLLMTCSLNNIQQGYILRKSSFI*HLQPLS Trigger: GCTTAGGGGTTGGAGGTGGCAGATAAAAGAGGATTT...CCTTAATATGTATCCTTGCTGGATATTATTCAAGCTGCAAGTCATCAAAAGACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000246081.3 |
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| CDS-3UTR CCA 90 bp | GACATCATCCAAACATCTATGGGTCCAAAAACTCTTCTTCCCCCAACAGCTTTAGGCAAATCAAAGAGCTaGGAAGAATTACTACTTAGA | + |
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Preference number: 4 (lower is better) Translates to: DIIQTSMGPKTLLPPTALGKSKS*EELLLR Trigger: TCTAAGTAGTAATTCTTCCCAGCTCTTTGATTTGCC...TAAAGCTGTTGGGGGAAGAAGAGTTTTTGGACCCATAGATGTTTGGATGATGTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000246081.3 |
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| CDS-3UTR CCA 90 bp | ATTTTCTGGTCTCAATTTACCCATTTGAGCTCAACATTTCCCCGCTCTAGCTCGCACCTATTTTATATATaGCAAATCAAAGAGCTGGGA | + |
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Preference number: 4 (lower is better) Translates to: IFWSQFTHLSSTFPRSSSHLFYI*QIKELG Trigger: TCCCAGCTCTTTGATTTGCCATATATAAAATAGGTG...CGAGCTAGAGCGGGGAAATGTTGAGCTCAAATGGGTAAATTGAGACCAGAAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000246081.3 |
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| CDS-3UTR GCA 90 bp | GGTCTTTTGATGACTTGCAGCTTGAATAATATCCAGCAAGGATACATATTAAGGTCCATAAATATTCCATaGACAGCACATACAGCCACA | + |
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Preference number: 4 (lower is better) Translates to: GLLMTCSLNNIQQGYILRSINIP*TAHTAT Trigger: TGTGGCTGTATGTGCTGTGCATGGAATATTTATGGA...CCTTAATATGTATCCTTGCTGGATATTATTCAAGCTGCAAGTCATCAAAAGACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000246081.3 |
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| CDS-3UTR GCA 90 bp | GGTCTTTTGATGACTTGCAGCTTGAATAATATCCAGCAAGGATACATATTAAGGGGTCTTTTGATGACTTaGAGCTTGAATAATATCCAG | + |
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Preference number: 4 (lower is better) Translates to: GLLMTCSLNNIQQGYILRGLLMT*SLNNIQ Trigger: CTGGATATTATTCAAGCTGCAAGTCATCAAAAGACC...CCTTAATATGTATCCTTGCTGGATATTATTCAAGCTGCAAGTCATCAAAAGACC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000246081.3 |
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| CDS GCA 90 bp | GAGAAACTCGCAGGCGTCCTCTTTGCTGATAGTGAGAATCATAGCTaGCAATACCTCCCTTTCACTCCGGGGTCCAGGGGGCGCTTTAGG | + |
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Preference number: 5 (lower is better) Translates to: EKLAGVLFADSENHS*QYLPFTPGSRGRFR Trigger: CCTAAAGCGCCCCCTGGACCCCGGAGTGAAAGGGAGGTATTGGCAGCTATGATTCTCACTATCAGCAAAGAGGACGCCTGCGAGTTTCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000486129.1 |
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| CDS GCA 90 bp | GCTTTTGAGTGCCAGGTGTTCTTCCCAGGTGCTTCCCATGCTCCATaGTTTCAGCAGCTTCGGACAGGATCTGCCTTTAGGGTTGCAGAT | + |
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Preference number: 5 (lower is better) Translates to: AFECQVFFPGASHAP*FQQLRTGSAFRVAD Trigger: ATCTGCAACCCTAAAGGCAGATCCTGTCCGAAGCTGCTGAAAGCATGGAGCATGGGAAGCACCTGGGAAGAACACCTGGCACTCAAAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000490148.1 |
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| CDS-3UTR CAA 90 bp | ACCCATTTGAGCTCAACATTTCCCCGCTCTAGCTCGTGGGCAGACCAGGCCAGCGGCATTATAATCTTCTaGAGCACTAGCCAGAGAAAT | + |
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Preference number: 5 (lower is better) Translates to: THLSSTFPRSSSWADQASGIIIF*STSQRN Trigger: ATTTCTCTGGCTAGTGCTCAAGAAGATTATAATGCC...GCTGGCCTGGTCTGCCCACGAGCTAGAGCGGGGAAATGTTGAGCTCAAATGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000246081.3 |
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| CDS-3UTR CAA 90 bp | ACCCATTTGAGCTCAACATTTCCCCGCTCTAGCTCGTGGGCAGACCAGGCCAGCCTTGATATATCACACTaGACTAGAGGAATTTGCACA | + |
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Preference number: 5 (lower is better) Translates to: THLSSTFPRSSSWADQASLDISH*TRGICT Trigger: TGTGCAAATTCCTCTAGTCAAGTGTGATATATCAAG...GCTGGCCTGGTCTGCCCACGAGCTAGAGCGGGGAAATGTTGAGCTCAAATGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000246081.3 |
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| CDS-3UTR CAA 90 bp | TGGGCCCATCAGGACCACAAAACCTGCATCCTCCTCAGATTTCTTGATATATCACCAACCCCTAAGCCCTaGCTCTTCTGTAAGGTAACA | + |
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Preference number: 5 (lower is better) Translates to: WAHQDHKTCILLRFLDISPTPKP*LFCKVT Trigger: TGTTACCTTACAGAAGAGCAAGGGCTTAGGGGTTGG...TGATATATCAAGAAATCTGAGGAGGATGCAGGTTTTGTGGTCCTGATGGGCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000246081.3 |
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| CDS TCA 90 bp | CAAACATTAATGCAAGCAGAGCCAAGCAAGAGGCTCCTAATTACATaGCCGATTAACAAGTCCCTGAGGTGCCACATGGCCCTATCATCA | + |
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Preference number: 5 (lower is better) Translates to: QTLMQAEPSKRLLIT*PINKSLRCHMALSS Trigger: TGATGATAGGGCCATGTGGCACCTCAGGGACTTGTTAATCGGTCATGTAATTAGGAGCCTCTTGCTTGGCTCTGCTTGCATTAATGTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000490148.1 |
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| CDS GCA 90 bp | TCTGCACAGAGCTTCTTGGAAGCTAGACGGTCCATAAATATTCCATaGACAGCACATACAGCCACAAGACCCGGGAGGAAAAGTAACAAT | + |
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Preference number: 5 (lower is better) Translates to: SAQSFLEARRSINIP*TAHTATRPGRKSNN Trigger: ATTGTTACTTTTCCTCCCGGGTCTTGTGGCTGTATGTGCTGTGCATGGAATATTTATGGACCGTCTAGCTTCCAAGAAGCTCTGTGCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000246081.3 |
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| CDS-3UTR CAA 90 bp | GACATCATCCAAACATCTATGGGTCCAAAAACTCTTCTTCCCCCAACAGCTTTAGTGGTGGGAACTTCCTaGGTAGCTTCCTGGTACACA | + |
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Preference number: 5 (lower is better) Translates to: DIIQTSMGPKTLLPPTALVVGTS*VASWYT Trigger: TGTGTACCAGGAAGCTACCAAGGAAGTTCCCACCAC...TAAAGCTGTTGGGGGAAGAAGAGTTTTTGGACCCATAGATGTTTGGATGATGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000246081.3 |
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| CDS GCA 90 bp | ATCCCTAACCTTGGGTCCTCCACTTGTGTCTGTTTCTGGAGGAAATaGATGAGGTTCAAGTCTTCAGAAAGTTACTTCACCAACAGTGAG | + |
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Preference number: 5 (lower is better) Translates to: IPNLGSSTCVCFWRK*MRFKSSESYFTNSE Trigger: CTCACTGTTGGTGAAGTAACTTTCTGAAGACTTGAACCTCATGCATTTCCTCCAGAAACAGACACAAGTGGAGGACCCAAGGTTAGGGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000490148.1 |
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| CDS TCA 90 bp | CTAACCTTGGGTCCTCCACTTGTGTCTGTTTCTGGAGGAAATGCATaGGGTTCAAGTCTTCAGAAAGTTACTTCACCAACAGTGAGTTGT | + |
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Preference number: 5 (lower is better) Translates to: LTLGPPLVSVSGGNA*GSSLQKVTSPTVSC Trigger: ACAACTCACTGTTGGTGAAGTAACTTTCTGAAGACTTGAACCTCATGCATTTCCTCCAGAAACAGACACAAGTGGAGGACCCAAGGTTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000490148.1 |
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| CDS-3UTR CAA 90 bp | TGGGCCCATCAGGACCACAAAACCTGCATCCTCCTCAGATTTCTTGATATATCATTGATGACTTGCAGCTaGAATAATATCCAGCAAGGA | + |
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Preference number: 5 (lower is better) Translates to: WAHQDHKTCILLRFLDISLMTCS*NNIQQG Trigger: TCCTTGCTGGATATTATTCAAGCTGCAAGTCATCAA...TGATATATCAAGAAATCTGAGGAGGATGCAGGTTTTGTGGTCCTGATGGGCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000246081.3 |
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| CDS-3UTR CAA 90 bp | TGGGCCCATCAGGACCACAAAACCTGCATCCTCCTCAGATTTCTTGATATATCATTTCTTTTACCAGCTTaGAGTACACATAGATCTGCT | + |
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Preference number: 5 (lower is better) Translates to: WAHQDHKTCILLRFLDISFLLPA*STHRSA Trigger: AGCAGATCTATGTGTACTCAAAGCTGGTAAAAGAAA...TGATATATCAAGAAATCTGAGGAGGATGCAGGTTTTGTGGTCCTGATGGGCCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000246081.3 |
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| CDS-3UTR CAA 90 bp | TACACATACATGATCTGTTATATGCATCCCCCTGTAAGAGGAGATTCTCTAGGTTCTCAATTTACCCATTaGAGCTCAACATTTCCCCGC | + |
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Preference number: 5 (lower is better) Translates to: YTYMICYMHPPVRGDSLGSQFTH*SSTFPR Trigger: GCGGGGAAATGTTGAGCTCAAATGGGTAAATTGAGA...ACCTAGAGAATCTCCTCTTACAGGGGGATGCATATAACAGATCATGTATGTGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000246081.3 |
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| CDS GCA 72 bp | GCAGGCGTCCTCTTTGCTGATAGTGAGAATCATAGCTaGCAATACCTCCCTTTCACTCCGGGGTCCAGGGGG | + |
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Preference number: 6 (lower is better) Translates to: AGVLFADSENHS*QYLPFTPGSRG Trigger: CCCCCTGGACCCCGGAGTGAAAGGGAGGTATTGGCAGCTATGATTCTCACTATCAGCAAAGAGGACGCCTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486129.1 |
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| CDS CCA 72 bp | TCAATATCCGTGGTGGGAACTTCCTTGGTAGCTTCCTaGTACACACGCTGTTCCTTGACCAAGTTCCTGGGG | + |
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Preference number: 6 (lower is better) Translates to: SISVVGTSLVAS*YTRCSLTKFLG Trigger: CCCCAGGAACTTGGTCAAGGAACAGCGTGTGTACCAGGAAGCTACCAAGGAAGTTCCCACCACGGATATTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000246081.3 ENST00000486129.1 |
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| CDS TCA 72 bp | ATGCAAGCAGAGCCAAGCAAGAGGCTCCTAATTACATaGCCGATTAACAAGTCCCTGAGGTGCCACATGGCC | + |
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Preference number: 6 (lower is better) Translates to: MQAEPSKRLLIT*PINKSLRCHMA Trigger: GGCCATGTGGCACCTCAGGGACTTGTTAATCGGTCATGTAATTAGGAGCCTCTTGCTTGGCTCTGCTTGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000490148.1 |
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| CDS CAA 72 bp | TCGCAGAAGAAGTCAATATCCGTGGTGGGAACTTCCTaGGTAGCTTCCTGGTACACACGCTGTTCCTTGACC | + |
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Preference number: 6 (lower is better) Translates to: SQKKSISVVGTS*VASWYTRCSLT Trigger: GGTCAAGGAACAGCGTGTGTACCAGGAAGCTACCAAGGAAGTTCCCACCACGGATATTGACTTCTTCTGCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000246081.3 ENST00000486129.1 |
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| CDS CAA 72 bp | GCTGAGTGTCTTCTGAGAAACTCGCAGGCGTCCTCTTaGCTGATAGTGAGAATCATAGCTGCCAATACCTCC | + |
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Preference number: 6 (lower is better) Translates to: AECLLRNSQASS*LIVRIIAANTS Trigger: GGAGGTATTGGCAGCTATGATTCTCACTATCAGCAAAGAGGACGCCTGCGAGTTTCTCAGAAGACACTCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486129.1 |
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| CDS GCA 72 bp | AGCTTCTTGGAAGCTAGACGGTCCATAAATATTCCATaGACAGCACATACAGCCACAAGACCCGGGAGGAAA | + |
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Preference number: 6 (lower is better) Translates to: SFLEARRSINIP*TAHTATRPGRK Trigger: TTTCCTCCCGGGTCTTGTGGCTGTATGTGCTGTGCATGGAATATTTATGGACCGTCTAGCTTCCAAGAAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000246081.3 |
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| CDS CAA 90 bp | AAAGCTGATGCTGAGTGTCTTCTGAGAAACTCGCAGGCGTCCTCTTaGCTGATAGTGAGAATCATAGCTGCCAATACCTCCCTTTCACTC | + |
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Preference number: 6 (lower is better) Translates to: KADAECLLRNSQASS*LIVRIIAANTSLSL Trigger: GAGTGAAAGGGAGGTATTGGCAGCTATGATTCTCACTATCAGCAAAGAGGACGCCTGCGAGTTTCTCAGAAGACACTCAGCATCAGCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486129.1 |
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| CDS CAA 72 bp | ATAGCAGTACAGTCGCAATTAGGGCATTCTCCTGATTaGATTCCAGAGCCAGAGTTCTTGCCTTGGTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: IAVQSQLGHSPD*IPEPEFLPWSP Trigger: TGGAGACCAAGGCAAGAACTCTGGCTCTGGAATCAAATCAGGAGAATGCCCTAATTGCGACTGTACTGCTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000490148.1 |
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| CDS GCA 72 bp | CTTGGGTCCTCCACTTGTGTCTGTTTCTGGAGGAAATaGATGAGGTTCAAGTCTTCAGAAAGTTACTTCACC | + |
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Preference number: 6 (lower is better) Translates to: LGSSTCVCFWRK*MRFKSSESYFT Trigger: GGTGAAGTAACTTTCTGAAGACTTGAACCTCATGCATTTCCTCCAGAAACAGACACAAGTGGAGGACCCAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000490148.1 |
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| CDS CAA 72 bp | GTTAATGAATCTACAGTCCGGGGCATTATAATCTTCTaGAGCACTAGCCAGAGAAATAGTATAGACACACTC | + |
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Preference number: 6 (lower is better) Translates to: VNESTVRGIIIF*STSQRNSIDTL Trigger: GAGTGTGTCTATACTATTTCTCTGGCTAGTGCTCAAGAAGATTATAATGCCCCGGACTGTAGATTCATTAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000246081.3 |
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