Pregenerated sensors for OTOL1 (Homo sapiens)

Ensembl gene IDs: ENSG00000182447

Ensembl transcript IDs: ENST00000327928.4

Found 19 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	CTTAGGGCCAGGTTCACCTTGTGCTCCCGGTTTTCCTGGGTATCCTaGAACTCCTTGGTCCCCACGTTCTCCTTTGAGTCCTTTCTCTCC	+
Preference number: 5 (lower is better) Translates to: LRARFTLCSRFSWVS*NSLVPTFSFESFLS Trigger: GGAGAGAAAGGACTCAAAGGAGAACGTGGGGACCAAGGAGTTCCAGGATACCCAGGAAAACCGGGAGCACAAGGTGAACCTGGCCCTAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327928.4
CDS TCA 90 bp	TGGCTGTCCAGTCTCTCCAGGTTCTCCTTTCTGCCCGGGTACAGGTaGACAACAATCACAACAATTCAAAAAGAAATCAGCTGGGTCAAG	+
Preference number: 5 (lower is better) Translates to: WLSSLSRFSFLPGYR*TTITTIQKEISWVK Trigger: CTTGACCCAGCTGATTTCTTTTTGAATTGTTGTGATTGTTGTTCACCTGTACCCGGGCAGAAAGGAGAACCTGGAGAGACTGGACAGCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000327928.4
CDS TCA 90 bp	TTGACACCTCAAGCCAGACTTGGTCTCCTGCACTTAATTTCAAGATaGCGAGGAGAGAGGCCTGGTCTATTTCCTGACCATAGAGAGTTT	+
Preference number: 5 (lower is better) Translates to: LTPQARLGLLHLISR*RGERPGLFPDHREF Trigger: AAACTCTCTATGGTCAGGAAATAGACCAGGCCTCTCTCCTCGTCATCTTGAAATTAAGTGCAGGAGACCAAGTCTGGCTTGAGGTGTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327928.4
CDS CCA 90 bp	GGTCTCCTTTTTCTCCTTTGGTACAATTCCCACATGTGTCTCCCTTaGAGCCTTTTTGTCCTTTCACTCCTCCCAAACCAATGTTTCCTT	+
Preference number: 5 (lower is better) Translates to: GLLFLLWYNSHMCLP*SLFVLSLLPNQCFL Trigger: AAGGAAACATTGGTTTGGGAGGAGTGAAAGGACAAAAAGGCTCCAAGGGAGACACATGTGGGAATTGTACCAAAGGAGAAAAAGGAGACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000327928.4
CDS CCA 90 bp	CTTTGGCATCTCTCTTTCCTCAGATTTCTTCGTAAATTTGGTATGTaGTGTGGTCTTTGCTATTGTGTTCATACCAGCAATAGCCAAAAT	+
Preference number: 5 (lower is better) Translates to: LWHLSFLRFLRKFGM*CGLCYCVHTSNSQN Trigger: ATTTTGGCTATTGCTGGTATGAACACAATAGCAAAGACCACACCACATACCAAATTTACGAAGAAATCTGAGGAAAGAGAGATGCCAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327928.4
CDS GCA 72 bp	ATCTCCCCCTTCTCTCCCTTGGCGCCAGGCCCTCCGTaGAGGCCAGGTGAGCCCATAGCCCCTTGGTCTCCT	+
Preference number: 6 (lower is better) Translates to: ISPFSPLAPGPP*RPGEPIAPWSP Trigger: AGGAGACCAAGGGGCTATGGGCTCACCTGGCCTGCACGGAGGGCCTGGCGCCAAGGGAGAGAAGGGGGAGAT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000327928.4
CDS CAA 72 bp	CGAGAGCCCTTCTTCCCAGTGGGGCCTCGGACCCCTTaGTTGCCAATGTCACCCTTCGGCCCAGTAGGTCCC	+
Preference number: 6 (lower is better) Translates to: REPFFPVGPRTP*LPMSPFGPVGP Trigger: GGGACCTACTGGGCCGAAGGGTGACATTGGCAACAAAGGGGTCCGAGGCCCCACTGGGAAGAAGGGCTCTCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327928.4
CDS TCA 72 bp	CTCTCCCTTGGCGCCAGGCCCTCCGTGCAGGCCAGGTaGGCCCATAGCCCCTTGGTCTCCTTTTTCTCCTTT	+
Preference number: 6 (lower is better) Translates to: LSLGARPSVQAR*AHSPLVSFFSF Trigger: AAAGGAGAAAAAGGAGACCAAGGGGCTATGGGCTCACCTGGCCTGCACGGAGGGCCTGGCGCCAAGGGAGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000327928.4
CDS CCA 72 bp	CTTAGGGCCAGGTTCACCTTGTGCTCCCGGTTTTCCTaGGTATCCTGGAACTCCTTGGTCCCCACGTTCTCC	+
Preference number: 6 (lower is better) Translates to: LRARFTLCSRFS*VSWNSLVPTFS Trigger: GGAGAACGTGGGGACCAAGGAGTTCCAGGATACCCAGGAAAACCGGGAGCACAAGGTGAACCTGGCCCTAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327928.4
CDS CCA 72 bp	AGGTTCACCTTGTGCTCCCGGTTTTCCTGGGTATCCTaGAACTCCTTGGTCCCCACGTTCTCCTTTGAGTCC	+
Preference number: 6 (lower is better) Translates to: RFTLCSRFSWVS*NSLVPTFSFES Trigger: GGACTCAAAGGAGAACGTGGGGACCAAGGAGTTCCAGGATACCCAGGAAAACCGGGAGCACAAGGTGAACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327928.4
CDS CCA 72 bp	TGTGCTCCCGGTTTTCCTGGGTATCCTGGAACTCCTTaGTCCCCACGTTCTCCTTTGAGTCCTTTCTCTCCT	+
Preference number: 6 (lower is better) Translates to: CAPGFPGYPGTP*SPRSPLSPFSP Trigger: AGGAGAGAAAGGACTCAAAGGAGAACGTGGGGACCAAGGAGTTCCAGGATACCCAGGAAAACCGGGAGCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327928.4
CDS GCA 72 bp	CACCTTTGGCCCCAGGCAGACCATTACGGCCGCTTTTaGCTTCCATTCCACTGTCTCCTTTGCTACCTTTTT	+
Preference number: 6 (lower is better) Translates to: HLWPQADHYGRF*LPFHCLLCYLF Trigger: AAAAAGGTAGCAAAGGAGACAGTGGAATGGAAGGCAAAAGCGGCCGTAATGGTCTGCCTGGGGCCAAAGGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327928.4
CDS CAA 72 bp	TCACCTTTGGCCCCAGGCAGACCATTACGGCCGCTTTaGCCTTCCATTCCACTGTCTCCTTTGCTACCTTTT	+
Preference number: 6 (lower is better) Translates to: SPLAPGRPLRPL*PSIPLSPLLPF Trigger: AAAAGGTAGCAAAGGAGACAGTGGAATGGAAGGCAAAAGCGGCCGTAATGGTCTGCCTGGGGCCAAAGGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327928.4
CDS TCA 72 bp	AAATTTGATGGGGATGTTAGGAGGAGGAAATGGCTTTaGCAAACCAGCGCTGAAAGCCGACCGGGGCACTCT	+
Preference number: 6 (lower is better) Translates to: KFDGDVRRRKWL*QTSAESRPGHS Trigger: AGAGTGCCCCGGTCGGCTTTCAGCGCTGGTTTGTCAAAGCCATTTCCTCCTCCTAACATCCCCATCAAATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327928.4
CDS CAA 90 bp	GGAGAGAGAGTGGCAGTGCCAAAGACAGAATCCAAGGCCGAGGGTTaGGTAATTGGTTCTGCCATTTCAGCCATTTCTGTGAAGAGGGTT	+
Preference number: 6 (lower is better) Translates to: GERVAVPKTESKAEG*VIGSAISAISVKRV Trigger: AACCCTCTTCACAGAAATGGCTGAAATGGCAGAACCAATTACCAAACCCTCGGCCTTGGATTCTGTCTTTGGCACTGCCACTCTCTCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327928.4
CDS TCA 72 bp	CAAGCCAGACTTGGTCTCCTGCACTTAATTTCAAGATaGCGAGGAGAGAGGCCTGGTCTATTTCCTGACCAT	+
Preference number: 6 (lower is better) Translates to: QARLGLLHLISR*RGERPGLFPDH Trigger: ATGGTCAGGAAATAGACCAGGCCTCTCTCCTCGTCATCTTGAAATTAAGTGCAGGAGACCAAGTCTGGCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327928.4
CDS TCA 72 bp	CACAACAATTCAAAAAGAAATCAGCTGGGTCAAGAGTaGAGTTTTCAAAGGGAGAGAGAGTGGCAGTGCCAA	+
Preference number: 6 (lower is better) Translates to: HNNSKRNQLGQE*SFQREREWQCQ Trigger: TTGGCACTGCCACTCTCTCTCCCTTTGAAAACTTCACTCTTGACCCAGCTGATTTCTTTTTGAATTGTTGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000327928.4
CDS CAA 90 bp	TTTAGACCCTTTGGCATCTCTCTTTCCTCAGATTTCTTCGTAAATTaGGTATGTGGTGTGGTCTTTGCTATTGTGTTCATACCAGCAATA	+
Preference number: 6 (lower is better) Translates to: FRPFGISLSSDFFVN*VCGVVFAIVFIPAI Trigger: TATTGCTGGTATGAACACAATAGCAAAGACCACACCACATACCAAATTTACGAAGAAATCTGAGGAAAGAGAGATGCCAAAGGGTCTAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327928.4
CDS CAA 90 bp	AGGAATAGAGCAGTTAAACTTCCCAGTGACAGGACTGTAATTCCCTaGGTCATTATAGAGAATCTTTTCAAATTTGATGGGGATGTTAGG	+
Preference number: 6 (lower is better) Translates to: RNRAVKLPSDRTVIP*VIIENLFKFDGDVR Trigger: CCTAACATCCCCATCAAATTTGAAAAGATTCTCTATAATGACCAAGGGAATTACAGTCCTGTCACTGGGAAGTTTAACTGCTCTATTCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327928.4

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