RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OTOG (Homo sapiens)

Ensembl gene IDs: ENSG00000188162

Ensembl transcript IDs: ENST00000342528.2, ENST00000399391.7, ENST00000399397.6, ENST00000428619.1, ENST00000485669.1, ENST00000498332.5

Found 1286 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCACTGAGGGTTTCACTCCCCCAGCACCGCCTCACAAGGCCGGCCTaGCTGCTGGGAAGGTTGCCTTGGGGTAAGGGTACAGGCTTAGGT +
Preference number: 1 (lower is better)
Translates to: SLRVSLPQHRLTRPA*LLGRLPWGKGTGLG
Trigger: ACCTAAGCCTGTACCCTTACCCCAAGGCAACCTTCCCAGCAGGCAGGCCGGCCTTGTGAGGCGGTGCTGGGGGAGTGAAACCCTCAGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399391.7
3UTR CCA 90 bp GCCCGACTCTGTCATGGCCTTGGAGAAAAGGCACACTGCAAAGCCTaGAGCTGCATTTGCAGGCTGAAGGTACCCCCTCAGCAACCTAGG +
Preference number: 1 (lower is better)
Translates to: ARLCHGLGEKAHCKA*SCICRLKVPPQQPR
Trigger: CCTAGGTTGCTGAGGGGGTACCTTCAGCCTGCAAATGCAGCTCCAGGCTTTGCAGTGTGCCTTTTCTCCAAGGCCATGACAGAGTCGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399391.7
3UTR CCA 90 bp TCAAAAAGGCCAAGAGAATGGGCCACTGCATCCTGCCCCTGTGCTTaGTCTTGGGTCCAGCTGTGGTTCCCATGTAAGCACCATGCACCT +
Preference number: 1 (lower is better)
Translates to: SKRPREWATASCPCA*SWVQLWFPCKHHAP
Trigger: AGGTGCATGGTGCTTACATGGGAACCACAGCTGGACCCAAGACCAAGCACAGGGGCAGGATGCAGTGGCCCATTCTCTTGGCCTTTTTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399391.7
3UTR CCA 90 bp GACACTCTCTTGCTAAACAGTCCCATGGAGCACAGAGACTGGCACTaGCTGAGCCACACAACCCATAATCAGGCTCCTCTGAGCCCGACT +
Preference number: 1 (lower is better)
Translates to: DTLLLNSPMEHRDWH*LSHTTHNQAPLSPT
Trigger: AGTCGGGCTCAGAGGAGCCTGATTATGGGTTGTGTGGCTCAGCCAGTGCCAGTCTCTGTGCTCCATGGGACTGTTTAGCAAGAGAGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399391.7
3UTR CCA 90 bp CCAACAGACACTCTCTTGCTAAACAGTCCCATGGAGCACAGAGACTaGCACTGGCTGAGCCACACAACCCATAATCAGGCTCCTCTGAGC +
Preference number: 1 (lower is better)
Translates to: PTDTLLLNSPMEHRD*HWLSHTTHNQAPLS
Trigger: GCTCAGAGGAGCCTGATTATGGGTTGTGTGGCTCAGCCAGTGCCAGTCTCTGTGCTCCATGGGACTGTTTAGCAAGAGAGTGTCTGTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399391.7
3UTR TCA 90 bp GACACCAGGCACCTTTCTTTGGACTACAGGAGATGCGAAGGTCACTaGGCTCACTCTGATTTCACAGATCTTGGTGAGACAACCTGGGCC +
Preference number: 1 (lower is better)
Translates to: DTRHLSLDYRRCEGH*AHSDFTDLGETTWA
Trigger: GGCCCAGGTTGTCTCACCAAGATCTGTGAAATCAGAGTGAGCTCAGTGACCTTCGCATCTCCTGTAGTCCAAAGAAAGGTGCCTGGTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399391.7
3UTR GCA 90 bp CTGGTTACTCCTGTGACCTCTTCCCACCATTCCATGCTCAACACGTaGCAGATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCA +
Preference number: 1 (lower is better)
Translates to: LVTPVTSSHHSMLNT*QISTTFNTPIHIGP
Trigger: TGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAATCTGGCACGTGTTGAGCATGGAATGGTGGGAAGAGGTCACAGGAGTAACCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399391.7
3UTR GCA 90 bp GAATCCACCATCTTTGTCTTTGGGAACTCCTTCTGGGCAGCCATCTaGAGGCCTGAGTGTTGCAGGTATAGCCCTCTTTCCTTTTACTGT +
Preference number: 1 (lower is better)
Translates to: ESTIFVFGNSFWAAI*RPECCRYSPLSFYC
Trigger: ACAGTAAAAGGAAAGAGGGCTATACCTGCAACACTCAGGCCTGCAGATGGCTGCCCAGAAGGAGTTCCCAAAGACAAAGATGGTGGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
3UTR CCA 90 bp TTCCTGAATTACCATATCAATACCAGGACACCAGGCACCTTTCTTTaGACTACAGGAGATGCGAAGGTCACTGAGCTCACTCTGATTTCA +
Preference number: 1 (lower is better)
Translates to: FLNYHINTRTPGTFL*TTGDAKVTELTLIS
Trigger: TGAAATCAGAGTGAGCTCAGTGACCTTCGCATCTCCTGTAGTCCAAAGAAAGGTGCCTGGTGTCCTGGTATTGATATGGTAATTCAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399391.7
3UTR-3UTR TCA 90 bp CTTATGTTCATGCCCTTCGGTTCCACGTGGCACAAAGTGGCACAGGGGGTGGGAGTGCTGGGCCCTCACTaGGGGTTTCACTCCCCCAGC +
Preference number: 2 (lower is better)
Translates to: LMFMPFGSTWHKVAQGVGVLGPH*GFHSPS
Trigger: GCTGGGGGAGTGAAACCCTCAGTGAGGGCCCAGCAC...TCCCACCCCCTGTGCCACTTTGTGCCACGTGGAACCGAAGGGCATGAACATAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000399391.7
3UTR-3UTR GCA 90 bp CTTATGTTCATGCCCTTCGGTTCCACGTGGCACAAAGTGGCACAGGGGGTGGGACAAGGCCGGCCTGCCTaGTGGGAAGGTTGCCTTGGG +
Preference number: 2 (lower is better)
Translates to: LMFMPFGSTWHKVAQGVGQGRPA*WEGCLG
Trigger: CCCAAGGCAACCTTCCCAGCAGGCAGGCCGGCCTTG...TCCCACCCCCTGTGCCACTTTGTGCCACGTGGAACCGAAGGGCATGAACATAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399391.7
3UTR-3UTR TCA 90 bp ATGTTCATGCCCTTCGGTTCCACGTGGCACAAAGTGGCACAGGGGGTGGGAGACATAATCAGGCTCCTCTaGGCCCGACTCTGTCATGGC +
Preference number: 2 (lower is better)
Translates to: MFMPFGSTWHKVAQGVGDIIRLL*ARLCHG
Trigger: GCCATGACAGAGTCGGGCTCAGAGGAGCCTGATTAT...GTCTCCCACCCCCTGTGCCACTTTGTGCCACGTGGAACCGAAGGGCATGAACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399391.7
3UTR-3UTR GCA 90 bp CTTATGTTCATGCCCTTCGGTTCCACGTGGCACAAAGTGGCACAGGGGGTGGGAGCCTGGAGCTGCATTTaGAGGCTGAAGGTACCCCCT +
Preference number: 2 (lower is better)
Translates to: LMFMPFGSTWHKVAQGVGAWSCI*RLKVPP
Trigger: AGGGGGTACCTTCAGCCTGCAAATGCAGCTCCAGGC...TCCCACCCCCTGTGCCACTTTGTGCCACGTGGAACCGAAGGGCATGAACATAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000399391.7
3UTR CAA 90 bp GGGAGGCTGGGGCTGTGTTTTCCACTGACACCAACAGACACTCTCTaGCTAAACAGTCCCATGGAGCACAGAGACTGGCACTGGCTGAGC +
Preference number: 2 (lower is better)
Translates to: GRLGLCFPLTPTDTL*LNSPMEHRDWHWLS
Trigger: GCTCAGCCAGTGCCAGTCTCTGTGCTCCATGGGACTGTTTAGCAAGAGAGTGTCTGTTGGTGTCAGTGGAAAACACAGCCCCAGCCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399391.7
3UTR-3UTR GCA 90 bp GGCCCTAGAATCCACCATCTTTGTCTTTGGGAACTCCTTCTGGGCAGCCATCTGTGGGCCACTGCATCCTaGCCCTGTGCTTGGTCTTGG +
Preference number: 2 (lower is better)
Translates to: GPRIHHLCLWELLLGSHLWATAS*PCAWSW
Trigger: CCAAGACCAAGCACAGGGGCAGGATGCAGTGGCCCA...CAGATGGCTGCCCAGAAGGAGTTCCCAAAGACAAAGATGGTGGATTCTAGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399391.7
3UTR-3UTR CCA 90 bp GGCCCTAGAATCCACCATCTTTGTCTTTGGGAACTCCTTCTGGGCAGCCATCTGTCCTGCCCCTGTGCTTaGTCTTGGGTCCAGCTGTGG +
Preference number: 2 (lower is better)
Translates to: GPRIHHLCLWELLLGSHLSCPCA*SWVQLW
Trigger: CCACAGCTGGACCCAAGACCAAGCACAGGGGCAGGA...CAGATGGCTGCCCAGAAGGAGTTCCCAAAGACAAAGATGGTGGATTCTAGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
3UTR-3UTR TCA 90 bp ATGTTCATGCCCTTCGGTTCCACGTGGCACAAAGTGGCACAGGGGGTGGGAGACTTCTGGTTACTCCTGTaGCCTCTTCCCACCATTCCA +
Preference number: 2 (lower is better)
Translates to: MFMPFGSTWHKVAQGVGDFWLLL*PLPTIP
Trigger: TGGAATGGTGGGAAGAGGTCACAGGAGTAACCAGAA...GTCTCCCACCCCCTGTGCCACTTTGTGCCACGTGGAACCGAAGGGCATGAACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399391.7
3UTR-3UTR TCA 90 bp AGCTGTGGTTCCCATGTAAGCACCATGCACCTTCCCATCTTCCCACAGCTCTCACAGGATGGGCAGGGGTaGCCCTTTCTGGTTACTCCT +
Preference number: 2 (lower is better)
Translates to: SCGSHVSTMHLPIFPQLSQDGQG*PFLVTP
Trigger: AGGAGTAACCAGAAAGGGTCACCCCTGCCCATCCTG...TGAGAGCTGTGGGAAGATGGGAAGGTGCATGGTGCTTACATGGGAACCACAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
3UTR-3UTR CCA 90 bp ATGTTCATGCCCTTCGGTTCCACGTGGCACAAAGTGGCACAGGGGGTGGGAGACTACCCCCATTCACATTaGGCCAGCTGGAAACAGAAA +
Preference number: 2 (lower is better)
Translates to: MFMPFGSTWHKVAQGVGDYPHSH*ASWKQK
Trigger: TTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTA...GTCTCCCACCCCCTGTGCCACTTTGTGCCACGTGGAACCGAAGGGCATGAACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000399391.7
3UTR-3UTR CCA 90 bp GGCCCTAGAATCCACCATCTTTGTCTTTGGGAACTCCTTCTGGGCAGCCATCTGCTGAGCCCTCAACTGTaGCACTTTCCCATGTGCGGA +
Preference number: 2 (lower is better)
Translates to: GPRIHHLCLWELLLGSHLLSPQL*HFPMCG
Trigger: TCCGCACATGGGAAAGTGCCACAGTTGAGGGCTCAG...CAGATGGCTGCCCAGAAGGAGTTCCCAAAGACAAAGATGGTGGATTCTAGGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399391.7
3UTR-3UTR GCA 90 bp CAGCCATCTGCAGGCCTGAGTGTTGCAGGTATAGCCCTCTTTCCTTTTACTGTGAAGAGAATGGGCCACTaGATCCTGCCCCTGTGCTTG +
Preference number: 2 (lower is better)
Translates to: QPSAGLSVAGIALFPFTVKRMGH*ILPLCL
Trigger: CAAGCACAGGGGCAGGATGCAGTGGCCCATTCTCTT...CACAGTAAAAGGAAAGAGGGCTATACCTGCAACACTCAGGCCTGCAGATGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399391.7
3UTR-3UTR CCA 90 bp CCAACAGACACTCTCTTGCTAAACAGTCCCATGGAGCACAGAGACTGGCACTGGAGCCCGACTCTGTCATaGCCTTGGAGAAAAGGCACA +
Preference number: 2 (lower is better)
Translates to: PTDTLLLNSPMEHRDWHWSPTLS*PWRKGT
Trigger: TGTGCCTTTTCTCCAAGGCCATGACAGAGTCGGGCT...CCAGTGCCAGTCTCTGTGCTCCATGGGACTGTTTAGCAAGAGAGTGTCTGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
3UTR-3UTR CCA 90 bp AACCTTATGTTCATGCCCTTCGGTTCCACGTGGCACAAAGTGGCACAGGGGGTGACTCTGTCATGGCCTTaGAGAAAAGGCACACTGCAA +
Preference number: 2 (lower is better)
Translates to: NLMFMPFGSTWHKVAQGVTLSWP*RKGTLQ
Trigger: TTGCAGTGTGCCTTTTCTCCAAGGCCATGACAGAGT...CACCCCCTGTGCCACTTTGTGCCACGTGGAACCGAAGGGCATGAACATAAGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399391.7
3UTR CAA 90 bp AGTGTTGCAGGTATAGCCCTCTTTCCTTTTACTGTGTCTGGTTTCTaGTGTAGTCAAAAAGGCCAAGAGAATGGGCCACTGCATCCTGCC +
Preference number: 2 (lower is better)
Translates to: SVAGIALFPFTVSGF*CSQKGQENGPLHPA
Trigger: GGCAGGATGCAGTGGCCCATTCTCTTGGCCTTTTTGACTACACAAGAAACCAGACACAGTAAAAGGAAAGAGGGCTATACCTGCAACACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399391.7
3UTR-3UTR CCA 90 bp TACAGGCTTAGGTCTTCCAAATCCTTTCCTGAATTACCATATCAATACCAGGACTCACATTGGGCCAGCTaGAAACAGAAAGTGGGGCTG +
Preference number: 2 (lower is better)
Translates to: YRLRSSKSFPELPYQYQDSHWAS*KQKVGL
Trigger: CAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGA...GTCCTGGTATTGATATGGTAATTCAGGAAAGGATTTGGAAGACCTAAGCCTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
3UTR-3UTR CCA 90 bp TACAGGCTTAGGTCTTCCAAATCCTTTCCTGAATTACCATATCAATACCAGGACCTTGGTGAGACAACCTaGGCCCTAGAATCCACCATC +
Preference number: 2 (lower is better)
Translates to: YRLRSSKSFPELPYQYQDLGETT*ALESTI
Trigger: GATGGTGGATTCTAGGGCCCAGGTTGTCTCACCAAG...GTCCTGGTATTGATATGGTAATTCAGGAAAGGATTTGGAAGACCTAAGCCTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399391.7
3UTR GCA 72 bp CACTCCCCCAGCACCGCCTCACAAGGCCGGCCTGCCTaGTGGGAAGGTTGCCTTGGGGTAAGGGTACAGGCT +
Preference number: 3 (lower is better)
Translates to: HSPSTASQGRPA*WEGCLGVRVQA
Trigger: AGCCTGTACCCTTACCCCAAGGCAACCTTCCCAGCAGGCAGGCCGGCCTTGTGAGGCGGTGCTGGGGGAGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399391.7
3UTR-3UTR CAA 90 bp ATGTTCATGCCCTTCGGTTCCACGTGGCACAAAGTGGCACAGGGGGTGGGAGACCCCCTGTGCTTGGTCTaGGGTCCAGCTGTGGTTCCC +
Preference number: 3 (lower is better)
Translates to: MFMPFGSTWHKVAQGVGDPLCLV*GPAVVP
Trigger: GGGAACCACAGCTGGACCCAAGACCAAGCACAGGGG...GTCTCCCACCCCCTGTGCCACTTTGTGCCACGTGGAACCGAAGGGCATGAACAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000399391.7
3UTR TCA 72 bp ACGCTGGCCCTGGCTTTAGGGGACGCTCTGGTTCAGTaGCAAGGATCTCACAAGTGCTCAGGGAGGCTGGGG +
Preference number: 3 (lower is better)
Translates to: TLALALGDALVQ*QGSHKCSGRLG
Trigger: CCCCAGCCTCCCTGAGCACTTGTGAGATCCTTGTCACTGAACCAGAGCGTCCCCTAAAGCCAGGGCCAGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
3UTR GCA 72 bp CAGGGCAGTGCTGGGGCCTGCACAACCTTATGTTCATaGCCTTCGGTTCCACGTGGCACAAAGTGGCACAGG +
Preference number: 3 (lower is better)
Translates to: QGSAGACTTLCS*PSVPRGTKWHR
Trigger: CCTGTGCCACTTTGTGCCACGTGGAACCGAAGGGCATGAACATAAGGTTGTGCAGGCCCCAGCACTGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
3UTR CCA 72 bp CCAAGAGAATGGGCCACTGCATCCTGCCCCTGTGCTTaGTCTTGGGTCCAGCTGTGGTTCCCATGTAAGCAC +
Preference number: 3 (lower is better)
Translates to: PREWATASCPCA*SWVQLWFPCKH
Trigger: GTGCTTACATGGGAACCACAGCTGGACCCAAGACCAAGCACAGGGGCAGGATGCAGTGGCCCATTCTCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
3UTR CCA 72 bp TTATGTTCATGCCCTTCGGTTCCACGTGGCACAAAGTaGCACAGGGGGTGGGAGACTTGCAGAGTGGGGTGT +
Preference number: 3 (lower is better)
Translates to: LCSCPSVPRGTK*HRGWETCRVGC
Trigger: ACACCCCACTCTGCAAGTCTCCCACCCCCTGTGCCACTTTGTGCCACGTGGAACCGAAGGGCATGAACATAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399391.7
3UTR CCA 72 bp CTGCACAACCTTATGTTCATGCCCTTCGGTTCCACGTaGCACAAAGTGGCACAGGGGGTGGGAGACTTGCAG +
Preference number: 3 (lower is better)
Translates to: LHNLMFMPFGST*HKVAQGVGDLQ
Trigger: CTGCAAGTCTCCCACCCCCTGTGCCACTTTGTGCCACGTGGAACCGAAGGGCATGAACATAAGGTTGTGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399391.7
3UTR CCA 72 bp AATCAGGCTCCTCTGAGCCCGACTCTGTCATGGCCTTaGAGAAAAGGCACACTGCAAAGCCTGGAGCTGCAT +
Preference number: 3 (lower is better)
Translates to: NQAPLSPTLSWP*RKGTLQSLELH
Trigger: ATGCAGCTCCAGGCTTTGCAGTGTGCCTTTTCTCCAAGGCCATGACAGAGTCGGGCTCAGAGGAGCCTGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
3UTR CCA 72 bp ACCCATAATCAGGCTCCTCTGAGCCCGACTCTGTCATaGCCTTGGAGAAAAGGCACACTGCAAAGCCTGGAG +
Preference number: 3 (lower is better)
Translates to: THNQAPLSPTLS*PWRKGTLQSLE
Trigger: CTCCAGGCTTTGCAGTGTGCCTTTTCTCCAAGGCCATGACAGAGTCGGGCTCAGAGGAGCCTGATTATGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
3UTR CCA 72 bp TTGCTAAACAGTCCCATGGAGCACAGAGACTGGCACTaGCTGAGCCACACAACCCATAATCAGGCTCCTCTG +
Preference number: 3 (lower is better)
Translates to: LLNSPMEHRDWH*LSHTTHNQAPL
Trigger: CAGAGGAGCCTGATTATGGGTTGTGTGGCTCAGCCAGTGCCAGTCTCTGTGCTCCATGGGACTGTTTAGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399391.7
3UTR-3UTR CAA 90 bp AACCTTATGTTCATGCCCTTCGGTTCCACGTGGCACAAAGTGGCACAGGGGGTGACCAGGCACCTTTCTTaGGACTACAGGAGATGCGAA +
Preference number: 3 (lower is better)
Translates to: NLMFMPFGSTWHKVAQGVTRHLS*DYRRCE
Trigger: TTCGCATCTCCTGTAGTCCAAAGAAAGGTGCCTGGT...CACCCCCTGTGCCACTTTGTGCCACGTGGAACCGAAGGGCATGAACATAAGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399391.7
3UTR GCA 72 bp AACTCCTTCTGGGCAGCCATCTGCAGGCCTGAGTGTTaGAGGTATAGCCCTCTTTCCTTTTACTGTGTCTGG +
Preference number: 3 (lower is better)
Translates to: NSFWAAICRPEC*RYSPLSFYCVW
Trigger: CCAGACACAGTAAAAGGAAAGAGGGCTATACCTGCAACACTCAGGCCTGCAGATGGCTGCCCAGAAGGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
3UTR GCA 72 bp ATCTTTGTCTTTGGGAACTCCTTCTGGGCAGCCATCTaGAGGCCTGAGTGTTGCAGGTATAGCCCTCTTTCC +
Preference number: 3 (lower is better)
Translates to: IFVFGNSFWAAI*RPECCRYSPLS
Trigger: GGAAAGAGGGCTATACCTGCAACACTCAGGCCTGCAGATGGCTGCCCAGAAGGAGTTCCCAAAGACAAAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399391.7
3UTR CCA 72 bp ACTCTCTTGCTAAACAGTCCCATGGAGCACAGAGACTaGCACTGGCTGAGCCACACAACCCATAATCAGGCT +
Preference number: 3 (lower is better)
Translates to: TLLLNSPMEHRD*HWLSHTTHNQA
Trigger: AGCCTGATTATGGGTTGTGTGGCTCAGCCAGTGCCAGTCTCTGTGCTCCATGGGACTGTTTAGCAAGAGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399391.7
3UTR-3UTR CAA 90 bp CCAGGCACCTTTCTTTGGACTACAGGAGATGCGAAGGTCACTGAGCTCACTCTGACTGTGTCTGGTTTCTaGTGTAGTCAAAAAGGCCAA +
Preference number: 3 (lower is better)
Translates to: PGTFLWTTGDAKVTELTLTVSGF*CSQKGQ
Trigger: TTGGCCTTTTTGACTACACAAGAAACCAGACACAGT...CAGAGTGAGCTCAGTGACCTTCGCATCTCCTGTAGTCCAAAGAAAGGTGCCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399391.7
3UTR CCA 72 bp TACCATATCAATACCAGGACACCAGGCACCTTTCTTTaGACTACAGGAGATGCGAAGGTCACTGAGCTCACT +
Preference number: 3 (lower is better)
Translates to: YHINTRTPGTFL*TTGDAKVTELT
Trigger: AGTGAGCTCAGTGACCTTCGCATCTCCTGTAGTCCAAAGAAAGGTGCCTGGTGTCCTGGTATTGATATGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399391.7
3UTR TCA 72 bp CACCTTTCTTTGGACTACAGGAGATGCGAAGGTCACTaGGCTCACTCTGATTTCACAGATCTTGGTGAGACA +
Preference number: 3 (lower is better)
Translates to: HLSLDYRRCEGH*AHSDFTDLGET
Trigger: TGTCTCACCAAGATCTGTGAAATCAGAGTGAGCTCAGTGACCTTCGCATCTCCTGTAGTCCAAAGAAAGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399391.7
3UTR-3UTR CAA 90 bp ACAGGCTTAGGTCTTCCAAATCCTTTCCTGAATTACCATATCAATACCAGGACAATACCCCCATTCACATaGGGCCAGCTGGAAACAGAA +
Preference number: 3 (lower is better)
Translates to: TGLGLPNPFLNYHINTRTIPPFT*GQLETE
Trigger: TTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTAT...TGTCCTGGTATTGATATGGTAATTCAGGAAAGGATTTGGAAGACCTAAGCCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp CCACGTGGCACAAAGTGGCACAGGGGGTGGGAGACTTGCAGAGTGGGGTGTGGAGTGGCGGGCGCAGTCTaGGATCCAGGATGCCCCGGG +
Preference number: 4 (lower is better)
Translates to: PRGTKWHRGWETCRVGCGVAGAV*DPGCPG
Trigger: CCCGGGGCATCCTGGATCGCAGACTGCGCCCGCCAC...TCCACACCCCACTCTGCAAGTCTCCCACCCCCTGTGCCACTTTGTGCCACGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp AAAGGCCAAGAGAATGGGCCACTGCATCCTGCCCCTGTGCTTGGTCTTGGGTCCCAGGGCCACCAGGCCTaGCTGCCGTGTCCCCCGGTG +
Preference number: 4 (lower is better)
Translates to: KGQENGPLHPAPVLGLGSQGHQA*LPCPPV
Trigger: CACCGGGGGACACGGCAGGCAGGCCTGGTGGCCCTG...GGACCCAAGACCAAGCACAGGGGCAGGATGCAGTGGCCCATTCTCTTGGCCTTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp TACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTGGCGCACAGGCAGGGCTaGCCGCAGCGGCAGGCATCC +
Preference number: 4 (lower is better)
Translates to: YPHSHWASWKQKVGLAEVAHRQG*PQRQAS
Trigger: GGATGCCTGCCGCTGCGGGCAGCCCTGCCTGTGCGC...CACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp TACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTGCGGCACCCAGGGGCGTaGTGCTGCAGTGGTGGCGGG +
Preference number: 4 (lower is better)
Translates to: YPHSHWASWKQKVGLAEVRHPGA*CCSGGG
Trigger: CCCGCCACCACTGCAGCAGCACGCCCCTGGGTGCCG...CACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp GCCAAGAGAATGGGCCACTGCATCCTGCCCCTGTGCTTGGTCTTGGGTCCAGCTGAAGCACTCTGGGCCTaGGTGGGCTGGGGGACCCCT +
Preference number: 4 (lower is better)
Translates to: AKRMGHCILPLCLVLGPAEALWA*VGWGTP
Trigger: AGGGGTCCCCCAGCCCACCCAGGCCCAGAGTGCTTC...AGCTGGACCCAAGACCAAGCACAGGGGCAGGATGCAGTGGCCCATTCTCTTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp ATGTTCATGCCCTTCGGTTCCACGTGGCACAAAGTGGCACAGGGGGTGGGAGACTCAACGGGGAGCCCATaGCGCCGGCACAGGTGGGCG +
Preference number: 4 (lower is better)
Translates to: MFMPFGSTWHKVAQGVGDSTGSP*RRHRWA
Trigger: CGCCCACCTGTGCCGGCGCCATGGGCTCCCCGTTGA...GTCTCCCACCCCCTGTGCCACTTTGTGCCACGTGGAACCGAAGGGCATGAACAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp AAAGGCCAAGAGAATGGGCCACTGCATCCTGCCCCTGTGCTTGGTCTTGGGTCCGGCGTGCTGCTGCAGTaGTGGCGGGCGCAGTCTGCG +
Preference number: 4 (lower is better)
Translates to: KGQENGPLHPAPVLGLGSGVLLQ*WRAQSA
Trigger: CGCAGACTGCGCCCGCCACCACTGCAGCAGCACGCC...GGACCCAAGACCAAGCACAGGGGCAGGATGCAGTGGCCCATTCTCTTGGCCTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp CAGGGCAGTGCTGGGGCCTGCACAACCTTATGTTCATGCCCTTCGGTTCCACGTTGGCAGAGCTGTGCCTaGCTGGGCTCCCTCGGGCTC +
Preference number: 4 (lower is better)
Translates to: QGSAGACTTLCSCPSVPRWQSCA*LGSLGL
Trigger: GAGCCCGAGGGAGCCCAGGCAGGCACAGCTCTGCCA...ACGTGGAACCGAAGGGCATGAACATAAGGTTGTGCAGGCCCCAGCACTGCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp TACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTGGCCAGCCTCCCGAGGTaGCTCCCCGGGCTAAGGCAG +
Preference number: 4 (lower is better)
Translates to: YPHSHWASWKQKVGLAEVASLPR*LPGLRQ
Trigger: CTGCCTTAGCCCGGGGAGGCACCTCGGGAGGCTGGC...CACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000399397.6
CDS-3UTR GCA 90 bp AATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGGCTGCGGCGAGGCGCTaGACCCGCAGGGACTCGGCT +
Preference number: 4 (lower is better)
Translates to: NTPIHIGPAGNRKWGWQRAAARR*TRRDSA
Trigger: AGCCGAGTCCCTGCGGGTGCAGCGCCTCGCCGCAGC...CCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399397.6
CDS-3UTR GCA 90 bp AATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTTGCAAGGGCCGCCCTaGCTGGGCACACGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: NTPIHIGPAGNRKWGWQRLQGPP*LGTRPG
Trigger: GCCCGGGCGTGTGCCCAGGCAGGGCGGCCCTTGCAA...CCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp GGACGCTCTGGTTCAGTGACAAGGATCTCACAAGTGCTCAGGGAGGCTGGGGCTGCGAGGTCCCGCGGGTaGTCGTACTCCTGGTTCGCC +
Preference number: 4 (lower is better)
Translates to: GRSGSVTRISQVLREAGAARSRG*SYSWFA
Trigger: GGCGAACCAGGAGTACGAGCACCCGCGGGACCTCGC...AGCCCCAGCCTCCCTGAGCACTTGTGAGATCCTTGTCACTGAACCAGAGCGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp CAGGGCAGTGCTGGGGCCTGCACAACCTTATGTTCATGCCCTTCGGTTCCACGTGTGGGCCCTGGAGGCTaGTTAGGGGCCTGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: QGSAGACTTLCSCPSVPRVGPGG*LGACSC
Trigger: GCAGGAGCAGGCCCCTAACCAGCCTCCAGGGCCCAC...ACGTGGAACCGAAGGGCATGAACATAAGGTTGTGCAGGCCCCAGCACTGCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR TCA 90 bp GGCTCCTCTGAGCCCGACTCTGTCATGGCCTTGGAGAAAAGGCACACTGCAAAGGCTGGGGGTGCTATGTaGGTGGGTGGGTGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: GSSEPDSVMALEKRHTAKAGGAM*VGGCAW
Trigger: CCAGGCGCACCCACCCACTCACATAGCACCCCCAGC...CTTTGCAGTGTGCCTTTTCTCCAAGGCCATGACAGAGTCGGGCTCAGAGGAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR TCA 90 bp CAGGGCAGTGCTGGGGCCTGCACAACCTTATGTTCATGCCCTTCGGTTCCACGTGTGCTGGGCCCTCACTaGGGGTTTCACTCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: QGSAGACTTLCSCPSVPRVLGPH*GFHSPS
Trigger: GCTGGGGGAGTGAAACCCTCAGTGAGGGCCCAGCAC...ACGTGGAACCGAAGGGCATGAACATAAGGTTGTGCAGGCCCCAGCACTGCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp CCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCGTCCCGGCAGCTGGCTaGCCGTGGGTCCCGGCAGGT +
Preference number: 4 (lower is better)
Translates to: PLIPPFTLGQLETESGAGVPAAG*PWVPAG
Trigger: ACCTGCCGGGACCCACGGGCAGCCAGCTGCCGGGAC...GCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp GGCTCCTCTGAGCCCGACTCTGTCATGGCCTTGGAGAAAAGGCACACTGCAAAGAGGGACTCGGCTGCCTaGTCACCCCAGGGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: GSSEPDSVMALEKRHTAKRDSAA*SPQGSQ
Trigger: CTGGCTGCCCTGGGGTGAGCAGGCAGCCGAGTCCCT...CTTTGCAGTGTGCCTTTTCTCCAAGGCCATGACAGAGTCGGGCTCAGAGGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp CCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCTTGCAAGGGCCGCCCTaGCTGGGCACACGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: PLIPPFTLGQLETESGAGLQGPP*LGTRPG
Trigger: GCCCGGGCGTGTGCCCAGGCAGGGCGGCCCTTGCAA...GCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp CCTGGACCTAAAGCCCATTTTCCATCTCAAACCAGGGACAGAGGTGAGCTCCCTCGGCACCCAGGGGCGTaGTGCTGCAGTGGTGGCGGG +
Preference number: 4 (lower is better)
Translates to: PGPKAHFPSQTRDRGELPRHPGA*CCSGGG
Trigger: CCCGCCACCACTGCAGCAGCACGCCCCTGGGTGCCG...AGGGAGCTCACCTCTGTCCCTGGTTTGAGATGGAAAATGGGCTTTAGGTCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp GGCTCCTCTGAGCCCGACTCTGTCATGGCCTTGGAGAAAAGGCACACTGCAAAGTGCACAGAGCGCCGCTaGAGGCCCACCTCACGGCAG +
Preference number: 4 (lower is better)
Translates to: GSSEPDSVMALEKRHTAKCTERR*RPTSRQ
Trigger: CTGCCGTGAGGTGGGCCTGCAGCGGCGCTCTGTGCA...CTTTGCAGTGTGCCTTTTCTCCAAGGCCATGACAGAGTCGGGCTCAGAGGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp CCACGTGGCACAAAGTGGCACAGGGGGTGGGAGACTTGCAGAGTGGGGTGTGGATCGCCTCCTGGTGGCTaGTGCTGGAGGAAACACGAG +
Preference number: 4 (lower is better)
Translates to: PRGTKWHRGWETCRVGCGSPPGG*CWRKHE
Trigger: CTCGTGTTTCCTCCAGCAGCAGCCACCAGGAGGCGA...TCCACACCCCACTCTGCAAGTCTCCCACCCCCTGTGCCACTTTGTGCCACGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp CTTATGTTCATGCCCTTCGGTTCCACGTGGCACAAAGTGGCACAGGGGGTGGGAAGCGCCACTCGCAGATaGGGTAGGCAGCCCCCGAGG +
Preference number: 4 (lower is better)
Translates to: LMFMPFGSTWHKVAQGVGSATRR*GRQPPR
Trigger: CCTCGGGGGCTGCCTACCCCATCTGCGAGTGGCGCT...TCCCACCCCCTGTGCCACTTTGTGCCACGTGGAACCGAAGGGCATGAACATAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp GCCAAGAGAATGGGCCACTGCATCCTGCCCCTGTGCTTGGTCTTGGGTCCAGCTCACAGCCTTCTACCCTaGGTACGTCCCGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: AKRMGHCILPLCLVLGPAHSLLP*VRPGSW
Trigger: CCAGCTGCCGGGACGTACCCAGGGTAGAAGGCTGTG...AGCTGGACCCAAGACCAAGCACAGGGGCAGGATGCAGTGGCCCATTCTCTTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp AAAGGCCAAGAGAATGGGCCACTGCATCCTGCCCCTGTGCTTGGTCTTGGGTCCGGTCTGGGTGGGGCCTaGAGACACCACTGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: KGQENGPLHPAPVLGLGSGLGGA*RHHWLL
Trigger: GAGGAGCCAGTGGTGTCTCCAGGCCCCACCCAGACC...GGACCCAAGACCAAGCACAGGGGCAGGATGCAGTGGCCCATTCTCTTGGCCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp ATGTTCATGCCCTTCGGTTCCACGTGGCACAAAGTGGCACAGGGGGTGGGAGACTGCTGCAGGGTGGTCTaGGTGGGGCCTGGAGACACC +
Preference number: 4 (lower is better)
Translates to: MFMPFGSTWHKVAQGVGDCCRVV*VGPGDT
Trigger: GGTGTCTCCAGGCCCCACCCAGACCACCCTGCAGCA...GTCTCCCACCCCCTGTGCCACTTTGTGCCACGTGGAACCGAAGGGCATGAACAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp TACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTGTGGGCCTGGGTGGGCTaGGGGACCCCTGTCCTGCTT +
Preference number: 4 (lower is better)
Translates to: YPHSHWASWKQKVGLAEVWAWVG*GTPVLL
Trigger: AAGCAGGACAGGGGTCCCCCAGCCCACCCAGGCCCA...CACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp GGCTCCTCTGAGCCCGACTCTGTCATGGCCTTGGAGAAAAGGCACACTGCAAAGAGGCAGGCGAGCCCATaGGCTGGCTGTGCCCGGCTT +
Preference number: 4 (lower is better)
Translates to: GSSEPDSVMALEKRHTAKRQASP*AGCARL
Trigger: AAGCCGGGCACAGCCAGCCCATGGGCTCGCCTGCCT...CTTTGCAGTGTGCCTTTTCTCCAAGGCCATGACAGAGTCGGGCTCAGAGGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp AAAGGCCAAGAGAATGGGCCACTGCATCCTGCCCCTGTGCTTGGTCTTGGGTCCACCTGGTGGCCATGGTaGTATGCTGGGCTGGGCGGG +
Preference number: 4 (lower is better)
Translates to: KGQENGPLHPAPVLGLGSTWWPW*YAGLGG
Trigger: CCCGCCCAGCCCAGCATACCACCATGGCCACCAGGT...GGACCCAAGACCAAGCACAGGGGCAGGATGCAGTGGCCCATTCTCTTGGCCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp CAACCTTATGTTCATGCCCTTCGGTTCCACGTGGCACAAAGTGGCACAGGGGGTTGGGTGAGGAGGCGGTaGCCTGGGCGGCATGTGGGG +
Preference number: 4 (lower is better)
Translates to: QPYVHALRFHVAQSGTGGWVRRR*PGRHVG
Trigger: CCCCACATGCCGCCCAGGCCACCGCCTCCTCACCCA...ACCCCCTGTGCCACTTTGTGCCACGTGGAACCGAAGGGCATGAACATAAGGTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR TCA 90 bp ATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTGGGGGCCGTCCTGGCTaGGACACGGCTCAGGGCATA +
Preference number: 4 (lower is better)
Translates to: IPPFTLGQLETESGAGRGGGRPG*DTAQGI
Trigger: TATGCCCTGAGCCGTGTCTCAGCCAGGACGGCCCCC...ACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp AATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGGGCTCTGCTGCCAGGTaGGGCCCTGCCGAGGTTCCA +
Preference number: 4 (lower is better)
Translates to: NTPIHIGPAGNRKWGWQRGSAAR*GPAEVP
Trigger: TGGAACCTCGGCAGGGCCTCACCTGGCAGCAGAGCC...CCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp CCACGTGGCACAAAGTGGCACAGGGGGTGGGAGACTTGCAGAGTGGGGTGTGGAGCTGCATTTGCAGGCTaGAGGTACCCCCTCAGCAAC +
Preference number: 4 (lower is better)
Translates to: PRGTKWHRGWETCRVGCGAAFAG*RYPLSN
Trigger: GTTGCTGAGGGGGTACCTTCAGCCTGCAAATGCAGC...TCCACACCCCACTCTGCAAGTCTCCCACCCCCTGTGCCACTTTGTGCCACGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp AATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGCGCCCACCGCCTTCATaGCCACCAGAGCACCACCGG +
Preference number: 4 (lower is better)
Translates to: NTPIHIGPAGNRKWGWQRRPPPS*PPEHHR
Trigger: CCGGTGGTGCTCTGGTGGGCATGAAGGCGGTGGGCG...CCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp ACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCGTCCCGGCAGCTGGCTaGCCGTGGGTCCCGGCAGGT +
Preference number: 4 (lower is better)
Translates to: TTFNTPIHIGPAGNRKWGVPAAG*PWVPAG
Trigger: ACCTGCCGGGACCCACGGGCAGCCAGCTGCCGGGAC...GCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp GGCTCCTCTGAGCCCGACTCTGTCATGGCCTTGGAGAAAAGGCACACTGCAAAGAGCTCCAGTGGCTGCTaGAGGGTGGTCTGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: GSSEPDSVMALEKRHTAKSSSGC*RVVWVG
Trigger: CCCCACCCAGACCACCCTGCAGCAGCCACTGGAGCT...CTTTGCAGTGTGCCTTTTCTCCAAGGCCATGACAGAGTCGGGCTCAGAGGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp CCACGTGGCACAAAGTGGCACAGGGGGTGGGAGACTTGCAGAGTGGGGTGTGGACCAGGTGTGGGTGTCTaGAGTGCAACAGGGAGGGAT +
Preference number: 4 (lower is better)
Translates to: PRGTKWHRGWETCRVGCGPGVGV*SATGRD
Trigger: ATCCCTCCCTGTTGCACTGCAGACACCCACACCTGG...TCCACACCCCACTCTGCAAGTCTCCCACCCCCTGTGCCACTTTGTGCCACGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp CTGAGCCCGACTCTGTCATGGCCTTGGAGAAAAGGCACACTGCAAAGCCTGGAGCCCATGGGCTGGCTGTaGCCGGCTTCGCCCTTCTCT +
Preference number: 4 (lower is better)
Translates to: LSPTLSWPWRKGTLQSLEPMGWL*PASPFS
Trigger: AGAGAAGGGCGAAGCCGGGCACAGCCAGCCCATGGG...CTCCAGGCTTTGCAGTGTGCCTTTTCTCCAAGGCCATGACAGAGTCGGGCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp ATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTTGGCAGAGCTGTGCCTaGCTGGGCTCCCTCGGGCTC +
Preference number: 4 (lower is better)
Translates to: IPPFTLGQLETESGAGRGWQSCA*LGSLGL
Trigger: GAGCCCGAGGGAGCCCAGGCAGGCACAGCTCTGCCA...ACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp CAACCTTATGTTCATGCCCTTCGGTTCCACGTGGCACAAAGTGGCACAGGGGGTGCACTGGCAGAGCTGTaGCTGCCTGGGCTCCCTCGG +
Preference number: 4 (lower is better)
Translates to: QPYVHALRFHVAQSGTGGALAEL*LPGLPR
Trigger: CCGAGGGAGCCCAGGCAGGCACAGCTCTGCCAGTGC...ACCCCCTGTGCCACTTTGTGCCACGTGGAACCGAAGGGCATGAACATAAGGTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp GGGTCCAGCTGTGGTTCCCATGTAAGCACCATGCACCTTCCCATCTTCCCACAGGCCACGCAGGGCTGCTaGACGTACTTGGTGTCCCGG +
Preference number: 4 (lower is better)
Translates to: GSSCGSHVSTMHLPIFPQATQGC*TYLVSR
Trigger: CCGGGACACCAAGTACGTGCAGCAGCCCTGCGTGGC...CTGTGGGAAGATGGGAAGGTGCATGGTGCTTACATGGGAACCACAGCTGGACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp ATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTTCGCCTCCTGGTGGCTaGTGCTGGGTTGCCCGGCTG +
Preference number: 4 (lower is better)
Translates to: IPPFTLGQLETESGAGRGSPPGG*CWVARL
Trigger: CAGCCGGGCAACCCAGCAGCAGCCACCAGGAGGCGA...ACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399397.6
CDS-3UTR GCA 90 bp AATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGCCCACGCCCGGCAAATaGTGTCCCTCTCAGGGCCGG +
Preference number: 4 (lower is better)
Translates to: NTPIHIGPAGNRKWGWQRPTPGK*CPSQGR
Trigger: CCGGCCCTGAGAGGGACAGCATTTGCCGGGCGTGGG...CCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp ATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTCCCACGCCCGGCAAATaGTGTCCCTCTCAGGGCCGG +
Preference number: 4 (lower is better)
Translates to: IPPFTLGQLETESGAGRGPTPGK*CPSQGR
Trigger: CCGGCCCTGAGAGGGACAGCATTTGCCGGGCGTGGG...ACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp TTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGCGCACAGGCAGGGCTaGCCGCAGCGGCAGGCATCC +
Preference number: 4 (lower is better)
Translates to: LIPPFTLGQLETESGAGRAHRQG*PQRQAS
Trigger: GGATGCCTGCCGCTGCGGGCAGCCCTGCCTGTGCGC...TCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp AGGCTGCTGCCCCTGGACCTAAAGCCCATTTTCCATCTCAAACCAGGGACAGAGGGGGCTTGGCACTGGTaGTGGCAGCAGCCGCTGAGG +
Preference number: 4 (lower is better)
Translates to: RLLPLDLKPIFHLKPGTEGAWHW*WQQPLR
Trigger: CCTCAGCGGCTGCTGCCAGCACCAGTGCCAAGCCCC...CTCTGTCCCTGGTTTGAGATGGAAAATGGGCTTTAGGTCCAGGGGCAGCAGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp TACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTGACTGTCTGGCCGGGCTaGATCACACCCAGCTCGCGG +
Preference number: 4 (lower is better)
Translates to: YPHSHWASWKQKVGLAEVTVWPG*ITPSSR
Trigger: CCGCGAGCTGGGTGTGATGCAGCCCGGCCAGACAGT...CACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp ATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTGCGAGGTCCCGCGGGTaGTCGTACTCCTGGTTCGCC +
Preference number: 4 (lower is better)
Translates to: IPPFTLGQLETESGAGRGARSRG*SYSWFA
Trigger: GGCGAACCAGGAGTACGAGCACCCGCGGGACCTCGC...ACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp CCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTCACCCAGGGGCGTGCTaGTGCAGTGGTGGCGGGCGC +
Preference number: 4 (lower is better)
Translates to: PPLIPPFTLGQLETESGAHPGAC*CSGGGR
Trigger: GCGCCCGCCACCACTGCAGCAGCACGCCCCTGGGTG...AGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp TACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTGGGGTCCCGGCAGGTTTaGAAGCAGGGGCTGGCACAG +
Preference number: 4 (lower is better)
Translates to: YPHSHWASWKQKVGLAEVGSRQV*KQGLAQ
Trigger: CTGTGCCAGCCCCTGCTTCCAAACCTGCCGGGACCC...CACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp CCACGTGGCACAAAGTGGCACAGGGGGTGGGAGACTTGCAGAGTGGGGTGTGGACCACTGGCTCCTCAGTaGCTGTCACTGGTGGGTTCA +
Preference number: 4 (lower is better)
Translates to: PRGTKWHRGWETCRVGCGPLAPQ*LSLVGS
Trigger: TGAACCCACCAGTGACAGCCACTGAGGAGCCAGTGG...TCCACACCCCACTCTGCAAGTCTCCCACCCCCTGTGCCACTTTGTGCCACGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp ATGTTCATGCCCTTCGGTTCCACGTGGCACAAAGTGGCACAGGGGGTGGGAGACTGGCTGTTGACAGGCTaGCGGCAGCTGGGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: MFMPFGSTWHKVAQGVGDWLLTG*RQLGSL
Trigger: CAGAGACCCCAGCTGCCGCCAGCCTGTCAACAGCCA...GTCTCCCACCCCCTGTGCCACTTTGTGCCACGTGGAACCGAAGGGCATGAACAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp ATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTGGGCGGAAGCGGGTCTaGCCCACTGAGGTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: IPPFTLGQLETESGAGRGGRKRV*PTEVRE
Trigger: CTCCCTGACCTCAGTGGGCCAGACCCGCTTCCGCCC...ACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp TACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTGCCCTCGCCCAGCACCTaGCAGTGCTCTGGGTCCAGA +
Preference number: 4 (lower is better)
Translates to: YPHSHWASWKQKVGLAEVPSPST*QCSGSR
Trigger: TCTGGACCCAGAGCACTGCCAGGTGCTGGGCGAGGG...CACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp ACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGGAGGAGGCGGTGGCCTaGGCGGCATGTGGGGGCGAG +
Preference number: 4 (lower is better)
Translates to: TFNTPIHIGPAGNRKWGWEEAVA*AACGGE
Trigger: CTCGCCCCCACATGCCGCCCAGGCCACCGCCTCCTC...CCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp CAGGGCAGTGCTGGGGCCTGCACAACCTTATGTTCATGCCCTTCGGTTCCACGTCCCGTGATCAGGATCTaGTCCTGTCGGCAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: QGSAGACTTLCSCPSVPRPVIRI*SCRQLG
Trigger: CCCCAGCTGCCGACAGGACCAGATCCTGATCACGGG...ACGTGGAACCGAAGGGCATGAACATAAGGTTGTGCAGGCCCCAGCACTGCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp GGACGCTCTGGTTCAGTGACAAGGATCTCACAAGTGCTCAGGGAGGCTGGGGCTAGCTCCACCACTGTCTaGCCGGGCTGCATCACACCC +
Preference number: 4 (lower is better)
Translates to: GRSGSVTRISQVLREAGASSTTV*PGCITP
Trigger: GGGTGTGATGCAGCCCGGCCAGACAGTGGTGGAGCT...AGCCCCAGCCTCCCTGAGCACTTGTGAGATCCTTGTCACTGAACCAGAGCGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp CTTATGTTCATGCCCTTCGGTTCCACGTGGCACAAAGTGGCACAGGGGGTGGGAAGGCCTCAGGACCACTaGCAGGCACAGTCGGTGGGC +
Preference number: 4 (lower is better)
Translates to: LMFMPFGSTWHKVAQGVGRPQDH*QAQSVG
Trigger: GCCCACCGACTGTGCCTGCCAGTGGTCCTGAGGCCT...TCCCACCCCCTGTGCCACTTTGTGCCACGTGGAACCGAAGGGCATGAACATAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp GCCAAGAGAATGGGCCACTGCATCCTGCCCCTGTGCTTGGTCTTGGGTCCAGCTCCACGTGGCACAAAGTaGCACAGGGGGTGGGAGACT +
Preference number: 4 (lower is better)
Translates to: AKRMGHCILPLCLVLGPAPRGTK*HRGWET
Trigger: AGTCTCCCACCCCCTGTGCCACTTTGTGCCACGTGG...AGCTGGACCCAAGACCAAGCACAGGGGCAGGATGCAGTGGCCCATTCTCTTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR TCA 90 bp CCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCGCAGGGGCCACGGGCTaGCACGCTCAGGTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: PLIPPFTLGQLETESGAGAGATG*HAQVQQ
Trigger: CTGCTGAACCTGAGCGTGTCAGCCCGTGGCCCCTGC...GCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp GGGTCCAGCTGTGGTTCCCATGTAAGCACCATGCACCTTCCCATCTTCCCACAGATGCATCCCCGTGTCTaGGCAGACCCTGGGGACAGG +
Preference number: 4 (lower is better)
Translates to: GSSCGSHVSTMHLPIFPQMHPRV*ADPGDR
Trigger: CCTGTCCCCAGGGTCTGCTCAGACACGGGGATGCAT...CTGTGGGAAGATGGGAAGGTGCATGGTGCTTACATGGGAACCACAGCTGGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR TCA 90 bp CTGAGCCCGACTCTGTCATGGCCTTGGAGAAAAGGCACACTGCAAAGCCTGGAGCAGGGTGCACTGGAATaGGCCCCGCTGGCACACACA +
Preference number: 4 (lower is better)
Translates to: LSPTLSWPWRKGTLQSLEQGALE*APLAHT
Trigger: TGTGTGTGCCAGCGGGGCTCATTCCAGTGCACCCTG...CTCCAGGCTTTGCAGTGTGCCTTTTCTCCAAGGCCATGACAGAGTCGGGCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR TCA 90 bp ATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTGCTGGCAGCAGCCGCTaGGGGAGCTGTTCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: IPPFTLGQLETESGAGRGAGSSR*GSCSRS
Trigger: AGACCTGGAACAGCTCCCTCAGCGGCTGCTGCCAGC...ACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp GGCCCTAGAATCCACCATCTTTGTCTTTGGGAACTCCTTCTGGGCAGCCATCTGCCCCCAGGCGGCCCGTaGTCAGGATCTGGTCCTGTC +
Preference number: 4 (lower is better)
Translates to: GPRIHHLCLWELLLGSHLPPGGP*SGSGPV
Trigger: GACAGGACCAGATCCTGATCACGGGCCGCCTGGGGG...CAGATGGCTGCCCAGAAGGAGTTCCCAAAGACAAAGATGGTGGATTCTAGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp ATGTTCATGCCCTTCGGTTCCACGTGGCACAAAGTGGCACAGGGGGTGGGAGACAGCTCCAGGTCCGTGTaGAGGTCGCTGCAGTTCACG +
Preference number: 4 (lower is better)
Translates to: MFMPFGSTWHKVAQGVGDSSRSV*RSLQFT
Trigger: CGTGAACTGCAGCGACCTGCACACGGACCTGGAGCT...GTCTCCCACCCCCTGTGCCACTTTGTGCCACGTGGAACCGAAGGGCATGAACAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp CTGAGCCCGACTCTGTCATGGCCTTGGAGAAAAGGCACACTGCAAAGCCTGGAGGGCCCAGCCTGGACGTaGACTGTGGTTCTCTGGTCC +
Preference number: 4 (lower is better)
Translates to: LSPTLSWPWRKGTLQSLEGPAWT*TVVLWS
Trigger: GGACCAGAGAACCACAGTGCACGTCCAGGCTGGGCC...CTCCAGGCTTTGCAGTGTGCCTTTTCTCCAAGGCCATGACAGAGTCGGGCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp CTTATGTTCATGCCCTTCGGTTCCACGTGGCACAAAGTGGCACAGGGGGTGGGATGCCGTGTCCCCCGGTaGAGCAAGAAGGAGGCATGC +
Preference number: 4 (lower is better)
Translates to: LMFMPFGSTWHKVAQGVGCRVPR*SKKEAC
Trigger: GCATGCCTCCTTCTTGCTGCACCGGGGGACACGGCA...TCCCACCCCCTGTGCCACTTTGTGCCACGTGGAACCGAAGGGCATGAACATAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp CTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCCACCAGGCCTGCCTaGCGTGTCCCCCGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: LPPLIPPFTLGQLETESGATRPA*RVPRCS
Trigger: GCTGCACCGGGGGACACGGCAGGCAGGCCTGGTGGC...CCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp GGACGCTCTGGTTCAGTGACAAGGATCTCACAAGTGCTCAGGGAGGCTGGGGCTCCAAACCCTCTACGATaGTCAGGGCTGGGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: GRSGSVTRISQVLREAGAPNPLR*SGLGLS
Trigger: GCTCAGCCCCAGCCCTGAGCATCGTAGAGGGTTTGG...AGCCCCAGCCTCCCTGAGCACTTGTGAGATCCTTGTCACTGAACCAGAGCGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp AATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGCCCAGCACCTGGCAGTaGTCTGGGTCCAGAGGCCCT +
Preference number: 4 (lower is better)
Translates to: NTPIHIGPAGNRKWGWQRPSTWQ*SGSRGP
Trigger: AGGGCCTCTGGACCCAGAGCACTGCCAGGTGCTGGG...CCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp ATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTCCCAGCACCTGGCAGTaGTCTGGGTCCAGAGGCCCT +
Preference number: 4 (lower is better)
Translates to: IPPFTLGQLETESGAGRGPSTWQ*SGSRGP
Trigger: AGGGCCTCTGGACCCAGAGCACTGCCAGGTGCTGGG...ACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp CTGAGCCCGACTCTGTCATGGCCTTGGAGAAAAGGCACACTGCAAAGCCTGGAGGCCGGTGTAAGATGGTaGCCTCGGAGCAGACGCAGC +
Preference number: 4 (lower is better)
Translates to: LSPTLSWPWRKGTLQSLEAGVRW*PRSRRS
Trigger: GCTGCGTCTGCTCCGAGGGCACCATCTTACACCGGC...CTCCAGGCTTTGCAGTGTGCCTTTTCTCCAAGGCCATGACAGAGTCGGGCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp CCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGGGACTCGGCTGCCTaGTCACCCCAGGGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: PLIPPFTLGQLETESGAGRDSAA*SPQGSQ
Trigger: CTGGCTGCCCTGGGGTGAGCAGGCAGCCGAGTCCCT...GCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp ACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCCCGCAGGGACTCGGCTaGCTGCTCACCCCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: TTFNTPIHIGPAGNRKWGPQGLG*LLTPGQ
Trigger: CTGCCCTGGGGTGAGCAGGCAGCCGAGTCCCTGCGG...GCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp GGCTCCTCTGAGCCCGACTCTGTCATGGCCTTGGAGAAAAGGCACACTGCAAAGCGCAAGGGTGCAGGGTaGACTGGAATGAGCCCCGCT +
Preference number: 4 (lower is better)
Translates to: GSSEPDSVMALEKRHTAKRKGAG*TGMSPA
Trigger: AGCGGGGCTCATTCCAGTGCACCCTGCACCCTTGCG...CTTTGCAGTGTGCCTTTTCTCCAAGGCCATGACAGAGTCGGGCTCAGAGGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp AACCTTATGTTCATGCCCTTCGGTTCCACGTGGCACAAAGTGGCACAGGGGGTGCCCTCGGCACCCCCATaGTGTCAGTGCAGGCGCACT +
Preference number: 4 (lower is better)
Translates to: NLMFMPFGSTWHKVAQGVPSAPP*CQCRRT
Trigger: AGTGCGCCTGCACTGACAGCATGGGGGTGCCGAGGG...CACCCCCTGTGCCACTTTGTGCCACGTGGAACCGAAGGGCATGAACATAAGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp CCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCGGGGCTTGGCACTGGTaGTGGCAGCAGCCGCTGAGG +
Preference number: 4 (lower is better)
Translates to: PLIPPFTLGQLETESGAGGAWHW*WQQPLR
Trigger: CCTCAGCGGCTGCTGCCAGCACCAGTGCCAAGCCCC...GCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp GCCAAGAGAATGGGCCACTGCATCCTGCCCCTGTGCTTGGTCTTGGGTCCAGCTTTCTGGGCAGCCATCTaGAGGCCTGAGTGTTGCAGG +
Preference number: 4 (lower is better)
Translates to: AKRMGHCILPLCLVLGPAFWAAI*RPECCR
Trigger: CCTGCAACACTCAGGCCTGCAGATGGCTGCCCAGAA...AGCTGGACCCAAGACCAAGCACAGGGGCAGGATGCAGTGGCCCATTCTCTTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp AACCTTATGTTCATGCCCTTCGGTTCCACGTGGCACAAAGTGGCACAGGGGGTGCAAGGCCGGCCTGCCTaGTGGGAAGGTTGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: NLMFMPFGSTWHKVAQGVQGRPA*WEGCLG
Trigger: CCCAAGGCAACCTTCCCAGCAGGCAGGCCGGCCTTG...CACCCCCTGTGCCACTTTGTGCCACGTGGAACCGAAGGGCATGAACATAAGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp ATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTTGTCTGAGCAGACCCTaGGGACAGGCGCAGCCCGAG +
Preference number: 4 (lower is better)
Translates to: IPPFTLGQLETESGAGRGCLSRP*GQAQPE
Trigger: CTCGGGCTGCGCCTGTCCCCAGGGTCTGCTCAGACA...ACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp TTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGCACTCCCTTGCTGGCTaGGGACTCCGTGGGGCCGGC +
Preference number: 4 (lower is better)
Translates to: FNTPIHIGPAGNRKWGWQHSLAG*GLRGAG
Trigger: GCCGGCCCCACGGAGTCCCCAGCCAGCAAGGGAGTG...CTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp GGACGCTCTGGTTCAGTGACAAGGATCTCACAAGTGCTCAGGGAGGCTGGGGCTGAGGACTCTGGTGTATaGGGGATGGCCAGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: GRSGSVTRISQVLREAGAEDSGV*GMARRL
Trigger: CAGCCTCCTGGCCATCCCCCATACACCAGAGTCCTC...AGCCCCAGCCTCCCTGAGCACTTGTGAGATCCTTGTCACTGAACCAGAGCGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp GGACGCTCTGGTTCAGTGACAAGGATCTCACAAGTGCTCAGGGAGGCTGGGGCTACAGGCAAGGAGCCATaGCCTCGGACTGTCACAGCC +
Preference number: 4 (lower is better)
Translates to: GRSGSVTRISQVLREAGATGKEP*PRTVTA
Trigger: GGCTGTGACAGTCCGAGGCCATGGCTCCTTGCCTGT...AGCCCCAGCCTCCCTGAGCACTTGTGAGATCCTTGTCACTGAACCAGAGCGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp TACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTGGAGACCTGGTGGCCATaGTGGTATGCTGGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: YPHSHWASWKQKVGLAEVETWWP*WYAGLG
Trigger: GCCCAGCCCAGCATACCACCATGGCCACCAGGTCTC...CACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp GGCTCCTCTGAGCCCGACTCTGTCATGGCCTTGGAGAAAAGGCACACTGCAAAGCTGCCAGCCCATCAGTaGCTGTTGACAGGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: GSSEPDSVMALEKRHTAKLPAHQ*LLTGWR
Trigger: CCGCCAGCCTGTCAACAGCCACTGATGGGCTGGCAG...CTTTGCAGTGTGCCTTTTCTCCAAGGCCATGACAGAGTCGGGCTCAGAGGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp ACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCCAGGGGCAGGCTaGTGTCGGGAGGCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: TTFNTPIHIGPAGNRKWGWPGAG*CREAGQ
Trigger: CTGGCCTGCCTCCCGACACCAGCCTGCCCCTGGCCA...GCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp GGCTCCTCTGAGCCCGACTCTGTCATGGCCTTGGAGAAAAGGCACACTGCAAAGAAGGGCGTGAGAGGGTaGCTCGTAGCAGGCGTGAGC +
Preference number: 4 (lower is better)
Translates to: GSSEPDSVMALEKRHTAKKGVRG*LVAGVS
Trigger: GCTCACGCCTGCTACGAGCCACCCTCTCACGCCCTT...CTTTGCAGTGTGCCTTTTCTCCAAGGCCATGACAGAGTCGGGCTCAGAGGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp CCACGTGGCACAAAGTGGCACAGGGGGTGGGAGACTTGCAGAGTGGGGTGTGGAGCTGTCACACATGCCTaGTATGTGGAGTCGCTGGAG +
Preference number: 4 (lower is better)
Translates to: PRGTKWHRGWETCRVGCGAVTHA*YVESLE
Trigger: CTCCAGCGACTCCACATACCAGGCATGTGTGACAGC...TCCACACCCCACTCTGCAAGTCTCCCACCCCCTGTGCCACTTTGTGCCACGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp CTTATGTTCATGCCCTTCGGTTCCACGTGGCACAAAGTGGCACAGGGGGTGGGATCAAATGTCTCCACGTaGTGCTGCCCCCACGCCCGG +
Preference number: 4 (lower is better)
Translates to: LMFMPFGSTWHKVAQGVGSNVST*CCPHAR
Trigger: CCGGGCGTGGGGGCAGCACCACGTGGAGACATTTGA...TCCCACCCCCTGTGCCACTTTGTGCCACGTGGAACCGAAGGGCATGAACATAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp GGGTCCAGCTGTGGTTCCCATGTAAGCACCATGCACCTTCCCATCTTCCCACAGGGAAGTTGTGGGCCCTaGAGGCTGGTTAGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: GSSCGSHVSTMHLPIFPQGSCGP*RLVRGL
Trigger: CAGGCCCCTAACCAGCCTCCAGGGCCCACAACTTCC...CTGTGGGAAGATGGGAAGGTGCATGGTGCTTACATGGGAACCACAGCTGGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp CAGGGCAGTGCTGGGGCCTGCACAACCTTATGTTCATGCCCTTCGGTTCCACGTGTGCATTGCCGGAGCTaGGTCCTCCAGCCTTGCAAG +
Preference number: 4 (lower is better)
Translates to: QGSAGACTTLCSCPSVPRVHCRS*VLQPCK
Trigger: CTTGCAAGGCTGGAGGACCCAGCTCCGGCAATGCAC...ACGTGGAACCGAAGGGCATGAACATAAGGTTGTGCAGGCCCCAGCACTGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp GGGTCCAGCTGTGGTTCCCATGTAAGCACCATGCACCTTCCCATCTTCCCACAGACAGGGACACTCAGCTaGTGCCACGCAGCCCCCATC +
Preference number: 4 (lower is better)
Translates to: GSSCGSHVSTMHLPIFPQTGTLS*CHAAPI
Trigger: GATGGGGGCTGCGTGGCACCAGCTGAGTGTCCCTGT...CTGTGGGAAGATGGGAAGGTGCATGGTGCTTACATGGGAACCACAGCTGGACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp AGGCTGCTGCCCCTGGACCTAAAGCCCATTTTCCATCTCAAACCAGGGACAGAGGGACAGTGCACAGGCTaGCAGGCGGGCGCGGAAATC +
Preference number: 4 (lower is better)
Translates to: RLLPLDLKPIFHLKPGTEGQCTG*QAGAEI
Trigger: GATTTCCGCGCCCGCCTGCCAGCCTGTGCACTGTCC...CTCTGTCCCTGGTTTGAGATGGAAAATGGGCTTTAGGTCCAGGGGCAGCAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp ATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTGTGCTGCTGCAGTGGTaGCGGGCGCAGTCTGCGATC +
Preference number: 4 (lower is better)
Translates to: IPPFTLGQLETESGAGRGVLLQW*RAQSAI
Trigger: GATCGCAGACTGCGCCCGCCACCACTGCAGCAGCAC...ACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp ACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGGGCGTGCTGCTGCAGTaGTGGCGGGCGCAGTCTGCG +
Preference number: 4 (lower is better)
Translates to: TFNTPIHIGPAGNRKWGWGVLLQ*WRAQSA
Trigger: CGCAGACTGCGCCCGCCACCACTGCAGCAGCACGCC...CCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp AATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGGCGGTGGGCAGCTTATaGGAGAGCGGACCAGCACGG +
Preference number: 4 (lower is better)
Translates to: NTPIHIGPAGNRKWGWQRAVGSL*ESGPAR
Trigger: CCGTGCTGGTCCGCTCTCCCATAAGCTGCCCACCGC...CCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp ACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGGCAGGGGCCACGGGCTaGCACGCTCAGGTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: TFNTPIHIGPAGNRKWGWAGATG*HAQVQQ
Trigger: CTGCTGAACCTGAGCGTGTCAGCCCGTGGCCCCTGC...CCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp ATGTTCATGCCCTTCGGTTCCACGTGGCACAAAGTGGCACAGGGGGTGGGAGACGGAGTTGAGATGCAGTaGGCTCCAGTGGCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: MFMPFGSTWHKVAQGVGDGVEMQ*APVAAA
Trigger: TGCAGCAGCCACTGGAGCTCACTGCATCTCAACTCC...GTCTCCCACCCCCTGTGCCACTTTGTGCCACGTGGAACCGAAGGGCATGAACAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR TCA 90 bp ACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGGCTGGGGGTGCTATGTaGGTGGGTGGGTGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: TFNTPIHIGPAGNRKWGWAGGAM*VGGCAW
Trigger: CCAGGCGCACCCACCCACTCACATAGCACCCCCAGC...CCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp ACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGGGGGGCCGTCCTGGCTaGGACACGGCTCAGGGCATA +
Preference number: 4 (lower is better)
Translates to: TFNTPIHIGPAGNRKWGWGGRPG*DTAQGI
Trigger: TATGCCCTGAGCCGTGTCTCAGCCAGGACGGCCCCC...CCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGT
59% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp GGCTCCTCTGAGCCCGACTCTGTCATGGCCTTGGAGAAAAGGCACACTGCAAAGTGGGCCTCAGCCAGCTaGGGCAACAGAACCAGCATG +
Preference number: 4 (lower is better)
Translates to: GSSEPDSVMALEKRHTAKWASAS*GNRTSM
Trigger: CATGCTGGTTCTGTTGCCTCAGCTGGCTGAGGCCCA...CTTTGCAGTGTGCCTTTTCTCCAAGGCCATGACAGAGTCGGGCTCAGAGGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR TCA 90 bp CCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCTCTGCTGCCAGGTaGGGCCCTGCCGAGGTTCCA +
Preference number: 4 (lower is better)
Translates to: PPLIPPFTLGQLETESGAGSAAR*GPAEVP
Trigger: TGGAACCTCGGCAGGGCCTCACCTGGCAGCAGAGCC...AGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp ATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTAGCGGTGGCAGGCACTaGAGGTGCGGTTGGACACCA +
Preference number: 4 (lower is better)
Translates to: IPPFTLGQLETESGAGRGSGGRH*RCGWTP
Trigger: TGGTGTCCAACCGCACCTTCAGTGCCTGCCACCGCT...ACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp AGGCTGCTGCCCCTGGACCTAAAGCCCATTTTCCATCTCAAACCAGGGACAGAGCCTGCGTGTTGCCATTaGAGGTGCCGCAGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: RLLPLDLKPIFHLKPGTEPACCH*RCRRGP
Trigger: TGGGCCTCTGCGGCACCTTCAATGGCAACACGCAGG...CTCTGTCCCTGGTTTGAGATGGAAAATGGGCTTTAGGTCCAGGGGCAGCAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR TCA 90 bp AATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGCAAACATCTCCCCCGTaGGCACGCTGCAGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: NTPIHIGPAGNRKWGWQRQTSPP*ARCRPA
Trigger: TGCAGGCCTGCAGCGTGCTCACGGGGGAGATGTTTG...CCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp GGCTCCTCTGAGCCCGACTCTGTCATGGCCTTGGAGAAAAGGCACACTGCAAAGCCTTCCCCTTCCAAGTaGAGGGGCACTCCTCTGGCA +
Preference number: 4 (lower is better)
Translates to: GSSEPDSVMALEKRHTAKPSPSK*RGTPLA
Trigger: TGCCAGAGGAGTGCCCCTGCACTTGGAAGGGGAAGG...CTTTGCAGTGTGCCTTTTCTCCAAGGCCATGACAGAGTCGGGCTCAGAGGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp ACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCGCCCACCGCCTTCATaGCCACCAGAGCACCACCGG +
Preference number: 4 (lower is better)
Translates to: TFNTPIHIGPAGNRKWGWRPPPS*PPEHHR
Trigger: CCGGTGGTGCTCTGGTGGGCATGAAGGCGGTGGGCG...CCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp ATGTTCATGCCCTTCGGTTCCACGTGGCACAAAGTGGCACAGGGGGTGGGAGACGAAGTTGGGTCTGTCTaGTGCCTCCAGGGACACCAC +
Preference number: 4 (lower is better)
Translates to: MFMPFGSTWHKVAQGVGDEVGSV*CLQGHH
Trigger: GTGGTGTCCCTGGAGGCAGCAGACAGACCCAACTTC...GTCTCCCACCCCCTGTGCCACTTTGTGCCACGTGGAACCGAAGGGCATGAACAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp GGACGCTCTGGTTCAGTGACAAGGATCTCACAAGTGCTCAGGGAGGCTGGGGCTAAGGTGTCACGGCCCTaGCACTTAGCCAGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: GRSGSVTRISQVLREAGAKVSRP*HLASSR
Trigger: TCTGGAGCTGGCTAAGTGGCAGGGCCGTGACACCTT...AGCCCCAGCCTCCCTGAGCACTTGTGAGATCCTTGTCACTGAACCAGAGCGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp AATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGGAAGGCGGAAGAGTGTaGCCCGGCGGAACACCTCTG +
Preference number: 4 (lower is better)
Translates to: NTPIHIGPAGNRKWGWQREGGRV*PGGTPL
Trigger: CAGAGGTGTTCCGCCGGGGCACACTCTTCCGCCTTC...CCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp ATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTGCCTGCTGCTGGGGGTaGTATGTGAGTGGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: IPPFTLGQLETESGAGRGACCWG*YVSGWV
Trigger: CACCCACCCACTCACATAGCACCCCCAGCAGCAGGC...ACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp TACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTGATACCATGGAGGCCGTaGCCTCAGCCACAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: YPHSHWASWKQKVGLAEVIPWRP*PQPQAG
Trigger: TCCTGCCTGTGGCTGAGGGCACGGCCTCCATGGTAT...CACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp CCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGCACTGGCAGAGCTGTaGCTGCCTGGGCTCCCTCGG +
Preference number: 4 (lower is better)
Translates to: PPLIPPFTLGQLETESGAALAEL*LPGLPR
Trigger: CCGAGGGAGCCCAGGCAGGCACAGCTCTGCCAGTGC...AGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp CCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCTGCCAGGTGAGGCCCTaGCGAGGTTCCATGGGCCTC +
Preference number: 4 (lower is better)
Translates to: PLIPPFTLGQLETESGAGCQVRP*RGSMGL
Trigger: GAGGCCCATGGAACCTCGGCAGGGCCTCACCTGGCA...GCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp ACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCTCGTCCACCGGCTCTaGTGCCAGGTGAGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: TFNTPIHIGPAGNRKWGWLVHRL*CQVRPC
Trigger: GCAGGGCCTCACCTGGCAGCAGAGCCGGTGGACGAG...CCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp TACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTGCATGGCCCTGGGCCTTaGTGGTTTTGCTGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: YPHSHWASWKQKVGLAEVHGPGP*WFCWPP
Trigger: TGGAGGCCAGCAAAACCAGCAAGGCCCAGGGCCATG...CACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp AATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGGCCGGTGTAAGATGGTaGCCTCGGAGCAGACGCAGC +
Preference number: 4 (lower is better)
Translates to: NTPIHIGPAGNRKWGWQRAGVRW*PRSRRS
Trigger: GCTGCGTCTGCTCCGAGGGCACCATCTTACACCGGC...CCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp AGGCTGCTGCCCCTGGACCTAAAGCCCATTTTCCATCTCAAACCAGGGACAGAGACTTGGCCTCCGGGATaGAGAGTGCAGAGTGGCGCC +
Preference number: 4 (lower is better)
Translates to: RLLPLDLKPIFHLKPGTETWPPG*RVQSGA
Trigger: GGCGCCACTCTGCACTCTGCATCCCGGAGGCCAAGT...CTCTGTCCCTGGTTTGAGATGGAAAATGGGCTTTAGGTCCAGGGGCAGCAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp AATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGGCTGTGGCTCTGCACTaGCCCACAGAACGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: NTPIHIGPAGNRKWGWQRAVALH*PTERVL
Trigger: CAGCACCCGTTCTGTGGGGCAGTGCAGAGCCACAGC...CCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399397.6
CDS-3UTR GCA 90 bp ATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTCTCTGGCTGTGGCTCTaGACTGCCCCACAGAACGGG +
Preference number: 4 (lower is better)
Translates to: IPPFTLGQLETESGAGRGLWLWL*TAPQNG
Trigger: CCCGTTCTGTGGGGCAGTGCAGAGCCACAGCCAGAG...ACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000399397.6
CDS-3UTR GCA 90 bp AATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGGGCTGGTTAGGGGCCTaGTCCTGCCAGCTGTGCACA +
Preference number: 4 (lower is better)
Translates to: NTPIHIGPAGNRKWGWQRGWLGA*SCQLCT
Trigger: TGTGCACAGCTGGCAGGAGCAGGCCCCTAACCAGCC...CCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp GGCCCTAGAATCCACCATCTTTGTCTTTGGGAACTCCTTCTGGGCAGCCATCTGGGCATACTCCGCCAGTaGCCGGCACCAGGTGGCTAC +
Preference number: 4 (lower is better)
Translates to: GPRIHHLCLWELLLGSHLGILRQ*PAPGGY
Trigger: GTAGCCACCTGGTGCCGGGCACTGGCGGAGTATGCC...CAGATGGCTGCCCAGAAGGAGTTCCCAAAGACAAAGATGGTGGATTCTAGGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp AGCTGTGGTTCCCATGTAAGCACCATGCACCTTCCCATCTTCCCACAGCTCTCATGGGTCAGGGTCACCTaGCTCCGAGGGTCCTGGTGC +
Preference number: 4 (lower is better)
Translates to: SCGSHVSTMHLPIFPQLSWVRVT*LRGSWC
Trigger: GCACCAGGACCCTCGGAGGCAGGTGACCCTGACCCA...TGAGAGCTGTGGGAAGATGGGAAGGTGCATGGTGCTTACATGGGAACCACAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp CTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGCCAGGGGCGTGCTGCTaGAGTGGTGGCGGGCGCAGT +
Preference number: 4 (lower is better)
Translates to: LPPLIPPFTLGQLETESGPGACC*SGGGRS
Trigger: ACTGCGCCCGCCACCACTGCAGCAGCACGCCCCTGG...CCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp CAGGGCAGTGCTGGGGCCTGCACAACCTTATGTTCATGCCCTTCGGTTCCACGTCCTCCTGGTGGCTGCTaGTGGAGGAAACACGAGTCT +
Preference number: 4 (lower is better)
Translates to: QGSAGACTTLCSCPSVPRPPGGC*WRKHES
Trigger: AGACTCGTGTTTCCTCCAGCAGCAGCCACCAGGAGG...ACGTGGAACCGAAGGGCATGAACATAAGGTTGTGCAGGCCCCAGCACTGCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp CAGGGCAGTGCTGGGGCCTGCACAACCTTATGTTCATGCCCTTCGGTTCCACGTTGCATCCTGCCCCTGTaGTTGGTCTTGGGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: QGSAGACTTLCSCPSVPRCILPL*LVLGPA
Trigger: AGCTGGACCCAAGACCAAGCACAGGGGCAGGATGCA...ACGTGGAACCGAAGGGCATGAACATAAGGTTGTGCAGGCCCCAGCACTGCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp GGCTCCTCTGAGCCCGACTCTGTCATGGCCTTGGAGAAAAGGCACACTGCAAAGGCAGGGGCACTCCTCTaGCAGGAAACATGCATCCCC +
Preference number: 4 (lower is better)
Translates to: GSSEPDSVMALEKRHTAKAGALL*QETCIP
Trigger: GGGGATGCATGTTTCCTGCCAGAGGAGTGCCCCTGC...CTTTGCAGTGTGCCTTTTCTCCAAGGCCATGACAGAGTCGGGCTCAGAGGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp TACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTGTTTGGAAGCAGGGGCTaGCACAGGCATCGTAGCGCC +
Preference number: 4 (lower is better)
Translates to: YPHSHWASWKQKVGLAEVFGSRG*HRHRSA
Trigger: GGCGCTACGATGCCTGTGCCAGCCCCTGCTTCCAAA...CACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp TACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTGTGTGGGTGGGGGTCCTaGGGCTTTCCTGTGACAGCT +
Preference number: 4 (lower is better)
Translates to: YPHSHWASWKQKVGLAEVCGWGS*GFPVTA
Trigger: AGCTGTCACAGGAAAGCCCCAGGACCCCCACCCACA...CACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp CTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGCACTCCCTTGCTGGCTaGGGACTCCGTGGGGCCGGC +
Preference number: 4 (lower is better)
Translates to: LPPLIPPFTLGQLETESGHSLAG*GLRGAG
Trigger: GCCGGCCCCACGGAGTCCCCAGCCAGCAAGGGAGTG...CCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp AATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGGGATGGCCAGGAGGCTaGCAGTCACTCCCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: NTPIHIGPAGNRKWGWQRGWPGG*QSLPCW
Trigger: CCAGCAAGGGAGTGACTGCCAGCCTCCTGGCCATCC...CCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp ACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCGAAGCACTCTGGGCCTaGGTGGGCTGGGGGACCCCT +
Preference number: 4 (lower is better)
Translates to: TTFNTPIHIGPAGNRKWGEALWA*VGWGTP
Trigger: AGGGGTCCCCCAGCCCACCCAGGCCCAGAGTGCTTC...GCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp TTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAAGGCAGGCGAGCCCATaGGCTGGCTGTGCCCGGCTT +
Preference number: 4 (lower is better)
Translates to: LIPPFTLGQLETESGAGRRQASP*AGCARL
Trigger: AAGCCGGGCACAGCCAGCCCATGGGCTCGCCTGCCT...TCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp TTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGGGTGGTATGCTGGGCTaGGCGGGGTGGTGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: FNTPIHIGPAGNRKWGWQGGMLG*AGWCRG
Trigger: CCCTCTGCACCACCCCGCCCAGCCCAGCATACCACC...CTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp AATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGAAGGGCGTGAGAGGGTaGCTCGTAGCAGGCGTGAGC +
Preference number: 4 (lower is better)
Translates to: NTPIHIGPAGNRKWGWQRKGVRG*LVAGVS
Trigger: GCTCACGCCTGCTACGAGCCACCCTCTCACGCCCTT...CCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp AATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGACCAGCATGCTGTCTTaGGGGGCCGTCCTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: NTPIHIGPAGNRKWGWQRTSMLS*GAVLAE
Trigger: CTCAGCCAGGACGGCCCCCCAAGACAGCATGCTGGT...CCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp CAACCTTATGTTCATGCCCTTCGGTTCCACGTGGCACAAAGTGGCACAGGGGGTGCCCAGATGGTTCTGTaGTGGCCTCGTCCACCGGCT +
Preference number: 4 (lower is better)
Translates to: QPYVHALRFHVAQSGTGGAQMVL*WPRPPA
Trigger: AGCCGGTGGACGAGGCCACCACAGAACCATCTGGGC...ACCCCCTGTGCCACTTTGTGCCACGTGGAACCGAAGGGCATGAACATAAGGTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp AAAGGCCAAGAGAATGGGCCACTGCATCCTGCCCCTGTGCTTGGTCTTGGGTCCTTCGGGGATGGAGTCTaGACAGTCACCACAGGCGCA +
Preference number: 4 (lower is better)
Translates to: KGQENGPLHPAPVLGLGSFGDGV*TVTTGA
Trigger: TGCGCCTGTGGTGACTGTCCAGACTCCATCCCCGAA...GGACCCAAGACCAAGCACAGGGGCAGGATGCAGTGGCCCATTCTCTTGGCCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp CCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCTTGCCCGGCTGGCTCTaGCTGTGGCTCTGCACTGCC +
Preference number: 4 (lower is better)
Translates to: PLIPPFTLGQLETESGAGLPGWL*LWLCTA
Trigger: GGCAGTGCAGAGCCACAGCCAGAGCCAGCCGGGCAA...GCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399397.6
CDS-3UTR CCA 90 bp CAGGGCAGTGCTGGGGCCTGCACAACCTTATGTTCATGCCCTTCGGTTCCACGTACCCTCATGCCTCCATaGGTGACCTCCTTGGCCAGA +
Preference number: 4 (lower is better)
Translates to: QGSAGACTTLCSCPSVPRTLMPP*VTSLAR
Trigger: TCTGGCCAAGGAGGTCACCCATGGAGGCATGAGGGT...ACGTGGAACCGAAGGGCATGAACATAAGGTTGTGCAGGCCCCAGCACTGCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp ACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCGTGGGCCCTGGAGGCTaGTTAGGGGCCTGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: TTFNTPIHIGPAGNRKWGVGPGG*LGACSC
Trigger: GCAGGAGCAGGCCCCTAACCAGCCTCCAGGGCCCAC...GCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp CTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGAAGGGCCGCCCTGCCTaGGCACACGCCCGGGCATAC +
Preference number: 4 (lower is better)
Translates to: LPPLIPPFTLGQLETESGKGRPA*AHARAY
Trigger: GTATGCCCGGGCGTGTGCCCAGGCAGGGCGGCCCTT...CCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp CCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGGCTGGCCAGGTCCTaGCAGGTACGTCCACACGGG +
Preference number: 4 (lower is better)
Translates to: PPLIPPFTLGQLETESGAGLARS*QVRPHG
Trigger: CCCGTGTGGACGTACCTGCCAGGACCTGGCCAGCCC...AGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp AATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGGGCAGCAGGGGTCCTTaGTGGGTAGGAGCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: NTPIHIGPAGNRKWGWQRGSRGP*WVGARP
Trigger: TGGCCTTGCTCCTACCCACCAAGGACCCCTGCTGCC...CCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp CCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCCTGGGCGGCATGTaGGGGCGAGACCCTCACACA +
Preference number: 4 (lower is better)
Translates to: PPLIPPFTLGQLETESGAGLGGM*GRDPHT
Trigger: TGTGTGAGGGTCTCGCCCCCACATGCCGCCCAGGCC...AGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp TTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGCCTGGGCGGCATGTaGGGGCGAGACCCTCACACA +
Preference number: 4 (lower is better)
Translates to: LIPPFTLGQLETESGAGRGLGGM*GRDPHT
Trigger: TGTGTGAGGGTCTCGCCCCCACATGCCGCCCAGGCC...TCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp AGGCTGCTGCCCCTGGACCTAAAGCCCATTTTCCATCTCAAACCAGGGACAGAGCAGCAGGAGTCCTCCTaGAAGTGGGTGAGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: RLLPLDLKPIFHLKPGTEQQESS*KWVRRR
Trigger: CCGCCTCCTCACCCACTTCCAGGAGGACTCCTGCTG...CTCTGTCCCTGGTTTGAGATGGAAAATGGGCTTTAGGTCCAGGGGCAGCAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp TTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGGAGGGTCGAGCACGGTaGTGCAGCGGGAGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: FNTPIHIGPAGNRKWGWQEGRAR*CSGRCG
Trigger: GCCACACCTCCCGCTGCACCACCGTGCTCGACCCTC...CTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp AAAGGCCAAGAGAATGGGCCACTGCATCCTGCCCCTGTGCTTGGTCTTGGGTCCCCCTGTGCTTGGTCTTaGGTCCAGCTGTGGTTCCCA +
Preference number: 4 (lower is better)
Translates to: KGQENGPLHPAPVLGLGSPCAWS*VQLWFP
Trigger: TGGGAACCACAGCTGGACCCAAGACCAAGCACAGGG...GGACCCAAGACCAAGCACAGGGGCAGGATGCAGTGGCCCATTCTCTTGGCCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR TCA 90 bp CAGCCATCTGCAGGCCTGAGTGTTGCAGGTATAGCCCTCTTTCCTTTTACTGTGGGGCCGGCGGGGAGTTaGGATGCAGTGAGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: QPSAGLSVAGIALFPFTVGPAGS*DAVSSS
Trigger: ACTGGAGCTCACTGCATCTCAACTCCCCGCCGGCCC...CACAGTAAAAGGAAAGAGGGCTATACCTGCAACACTCAGGCCTGCAGATGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR TCA 90 bp ACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGGGGCCGGCGGGGAGTTaGGATGCAGTGAGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: TFNTPIHIGPAGNRKWGWGPAGS*DAVSSS
Trigger: ACTGGAGCTCACTGCATCTCAACTCCCCGCCGGCCC...CCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp CTTATGTTCATGCCCTTCGGTTCCACGTGGCACAAAGTGGCACAGGGGGTGGGAGGACAGTGCTGGGACTaGTTCACGCGAATCAGCTGG +
Preference number: 4 (lower is better)
Translates to: LMFMPFGSTWHKVAQGVGGQCWD*FTRISW
Trigger: CCAGCTGATTCGCGTGAATCAGTCCCAGCACTGTCC...TCCCACCCCCTGTGCCACTTTGTGCCACGTGGAACCGAAGGGCATGAACATAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR TCA 90 bp AGCTGTGGTTCCCATGTAAGCACCATGCACCTTCCCATCTTCCCACAGCTCTCAGGAGCAGGTGTAGGGTaGAGAGCCACACTGCGGGTC +
Preference number: 4 (lower is better)
Translates to: SCGSHVSTMHLPIFPQLSGAGVG*RATLRV
Trigger: GACCCGCAGTGTGGCTCTTCACCCTACACCTGCTCC...TGAGAGCTGTGGGAAGATGGGAAGGTGCATGGTGCTTACATGGGAACCACAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR TCA 90 bp ACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCGCTGCAGGCCTGCACTaGGTAGGAGGCGGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: TTFNTPIHIGPAGNRKWGAAGLH*VGGGLQ
Trigger: CTGCAAGCCGCCTCCTACTCAGTGCAGGCCTGCAGC...GCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp TTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGGCTGCAGGCCTGCACTaGGTAGGAGGCGGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: FNTPIHIGPAGNRKWGWQAAGLH*VGGGLQ
Trigger: CTGCAAGCCGCCTCCTACTCAGTGCAGGCCTGCAGC...CTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp CTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGCCCCCAGGCGGCCCGTaGTCAGGATCTGGTCCTGTC +
Preference number: 4 (lower is better)
Translates to: LPPLIPPFTLGQLETESGPPGGP*SGSGPV
Trigger: GACAGGACCAGATCCTGATCACGGGCCGCCTGGGGG...CCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp ATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTGCACACGCCATCTGCTaGGAGCTCCACCACTGTCTG +
Preference number: 4 (lower is better)
Translates to: IPPFTLGQLETESGAGRGAHAIC*ELHHCL
Trigger: CAGACAGTGGTGGAGCTCTCAGCAGATGGCGTGTGC...ACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp AATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGAGCTCCAGGTCCGTGTaGAGGTCGCTGCAGTTCACG +
Preference number: 4 (lower is better)
Translates to: NTPIHIGPAGNRKWGWQRSSRSV*RSLQFT
Trigger: CGTGAACTGCAGCGACCTGCACACGGACCTGGAGCT...CCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp CAGATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAGCCACCAGGCCTGCCTaGCGTGTCCCCCGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: QISTTFNTPIHIGPAGNRATRPA*RVPRCS
Trigger: GCTGCACCGGGGGACACGGCAGGCAGGCCTGGTGGC...TCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAATCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp CAGATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGACAGGGCCACCAGGCCTaGCTGCCGTGTCCCCCGGTG +
Preference number: 4 (lower is better)
Translates to: QISTTFNTPIHIGPAGNRQGHQA*LPCPPV
Trigger: CACCGGGGGACACGGCAGGCAGGCCTGGTGGCCCTG...TCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAATCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp AGCTGTGGTTCCCATGTAAGCACCATGCACCTTCCCATCTTCCCACAGCTCTCAGAAGGCGGAAGAGTGTaGCCCGGCGGAACACCTCTG +
Preference number: 4 (lower is better)
Translates to: SCGSHVSTMHLPIFPQLSEGGRV*PGGTPL
Trigger: CAGAGGTGTTCCGCCGGGGCACACTCTTCCGCCTTC...TGAGAGCTGTGGGAAGATGGGAAGGTGCATGGTGCTTACATGGGAACCACAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp ATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTGGCGGGGAGTTGAGATaGAGTGAGCTCCAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: IPPFTLGQLETESGAGRGGGELR*SELQWL
Trigger: CAGCCACTGGAGCTCACTGCATCTCAACTCCCCGCC...ACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp TACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTGTGGCACCTGACACCATaGCAGGTGTGGGTGTCTGCA +
Preference number: 4 (lower is better)
Translates to: YPHSHWASWKQKVGLAEVWHLTP*QVWVSA
Trigger: TGCAGACACCCACACCTGGCATGGTGTCAGGTGCCA...CACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp AATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGATACCATGGAGGCCGTaGCCTCAGCCACAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: NTPIHIGPAGNRKWGWQRIPWRP*PQPQAG
Trigger: TCCTGCCTGTGGCTGAGGGCACGGCCTCCATGGTAT...CCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp ATGTTCATGCCCTTCGGTTCCACGTGGCACAAAGTGGCACAGGGGGTGGGAGACCCACCTTCCCTGTGGTaGTCTTTCGTGGGACAACAG +
Preference number: 4 (lower is better)
Translates to: MFMPFGSTWHKVAQGVGDPPSLW*SFVGQQ
Trigger: CTGTTGTCCCACGAAAGAGCACCACAGGGAAGGTGG...GTCTCCCACCCCCTGTGCCACTTTGTGCCACGTGGAACCGAAGGGCATGAACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp TACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTGGGCCTCAGTGGTAGTTaGCAAAGCCTCCGCCAAACC +
Preference number: 4 (lower is better)
Translates to: YPHSHWASWKQKVGLAEVGLSGS*QSLRQT
Trigger: GGTTTGGCGGAGGCTTTGGCAACTACCACTGAGGCC...CACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp TTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGCCACGCAGGGCTGCTaGACGTACTTGGTGTCCCGG +
Preference number: 4 (lower is better)
Translates to: LIPPFTLGQLETESGAGRATQGC*TYLVSR
Trigger: CCGGGACACCAAGTACGTGCAGCAGCCCTGCGTGGC...TCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp CCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGGGCCACGCAGGGCTaGTGCACGTACTTGGTGTCC +
Preference number: 4 (lower is better)
Translates to: PLIPPFTLGQLETESGAGRATQG*CTYLVS
Trigger: GGACACCAAGTACGTGCAGCAGCCCTGCGTGGCCCT...GCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp CCAGGCACCTTTCTTTGGACTACAGGAGATGCGAAGGTCACTGAGCTCACTCTGGTGCCCAGGCCACACTaGACTTGGGGACAGCGGAAG +
Preference number: 4 (lower is better)
Translates to: PGTFLWTTGDAKVTELTLVPRPH*TWGQRK
Trigger: CTTCCGCTGTCCCCAAGTGCAGTGTGGCCTGGGCAC...CAGAGTGAGCTCAGTGACCTTCGCATCTCCTGTAGTCCAAAGAAAGGTGCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp CAGCCATCTGCAGGCCTGAGTGTTGCAGGTATAGCCCTCTTTCCTTTTACTGTGGTCTCCACGTGGTGCTaGCCCCACGCCCGGCAAATG +
Preference number: 4 (lower is better)
Translates to: QPSAGLSVAGIALFPFTVVSTWC*PHARQM
Trigger: CATTTGCCGGGCGTGGGGGCAGCACCACGTGGAGAC...CACAGTAAAAGGAAAGAGGGCTATACCTGCAACACTCAGGCCTGCAGATGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp TTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGTCTCCACGTGGTGCTaGCCCCACGCCCGGCAAATG +
Preference number: 4 (lower is better)
Translates to: LIPPFTLGQLETESGAGRVSTWC*PHARQM
Trigger: CATTTGCCGGGCGTGGGGGCAGCACCACGTGGAGAC...TCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp CAGGGCAGTGCTGGGGCCTGCACAACCTTATGTTCATGCCCTTCGGTTCCACGTTGCTCCTGCCAGCTGTaGACAAACTCAACCACGTCG +
Preference number: 4 (lower is better)
Translates to: QGSAGACTTLCSCPSVPRCSCQL*TNSTTS
Trigger: CGACGTGGTTGAGTTTGTGCACAGCTGGCAGGAGCA...ACGTGGAACCGAAGGGCATGAACATAAGGTTGTGCAGGCCCCAGCACTGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp GGCTCCTCTGAGCCCGACTCTGTCATGGCCTTGGAGAAAAGGCACACTGCAAAGATGGTTCCTGGGTTCTaGTGTAGGCACGGTGGGCGA +
Preference number: 4 (lower is better)
Translates to: GSSEPDSVMALEKRHTAKMVPGF*CRHGGR
Trigger: TCGCCCACCGTGCCTACAGCAGAACCCAGGAACCAT...CTTTGCAGTGTGCCTTTTCTCCAAGGCCATGACAGAGTCGGGCTCAGAGGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp TTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGCATACTCCGCCAGTaGCCGGCACCAGGTGGCTAC +
Preference number: 4 (lower is better)
Translates to: LIPPFTLGQLETESGAGRGILRQ*PAPGGY
Trigger: GTAGCCACCTGGTGCCGGGCACTGGCGGAGTATGCC...TCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp TACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTGGCCTTCTCCTTGCAGTaGACAGTGCATTGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: YPHSHWASWKQKVGLAEVAFSLQ*TVHCRS
Trigger: GCTCCGGCAATGCACTGTGCACTGCAAGGAGAAGGC...CACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp GGCCCTAGAATCCACCATCTTTGTCTTTGGGAACTCCTTCTGGGCAGCCATCTGACTGTCCACACAGGATaGCCGGGGATGGCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: GPRIHHLCLWELLLGSHLTVHTG*PGMAGG
Trigger: GCCTCCTGCCATCCCCGGGCATCCTGTGTGGACAGT...CAGATGGCTGCCCAGAAGGAGTTCCCAAAGACAAAGATGGTGGATTCTAGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp CAGGGCAGTGCTGGGGCCTGCACAACCTTATGTTCATGCCCTTCGGTTCCACGTCTCCGAGGGTCCTGGTaGAGAATCACTGACACTGAC +
Preference number: 4 (lower is better)
Translates to: QGSAGACTTLCSCPSVPRLRGSW*RITDTD
Trigger: GTCAGTGTCAGTGATTCTGCACCAGGACCCTCGGAG...ACGTGGAACCGAAGGGCATGAACATAAGGTTGTGCAGGCCCCAGCACTGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp TTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGATGGGTCAGGGTCACCTaGCTCCGAGGGTCCTGGTGC +
Preference number: 4 (lower is better)
Translates to: LIPPFTLGQLETESGAGRWVRVT*LRGSWC
Trigger: GCACCAGGACCCTCGGAGGCAGGTGACCCTGACCCA...TCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp ATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTGTGGAGGCGCAAGGGTaGAGGGTGCACTGGAATGAG +
Preference number: 4 (lower is better)
Translates to: IPPFTLGQLETESGAGRGVEAQG*RVHWNE
Trigger: CTCATTCCAGTGCACCCTGCACCCTTGCGCCTCCAC...ACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp CCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTCCCTCGGCACCCCCATaGTGTCAGTGCAGGCGCACT +
Preference number: 4 (lower is better)
Translates to: PPLIPPFTLGQLETESGAPSAPP*CQCRRT
Trigger: AGTGCGCCTGCACTGACAGCATGGGGGTGCCGAGGG...AGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp CCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGTCGAGCACGGTGGTaGAGCGGGAGGTGTGGCACA +
Preference number: 4 (lower is better)
Translates to: PPLIPPFTLGQLETESGAGRARW*SGRCGT
Trigger: TGTGCCACACCTCCCGCTGCACCACCGTGCTCGACC...AGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp CAGATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGACACCCAGGGGCGTGCTaGTGCAGTGGTGGCGGGCGC +
Preference number: 4 (lower is better)
Translates to: QISTTFNTPIHIGPAGNRHPGAC*CSGGGR
Trigger: GCGCCCGCCACCACTGCAGCAGCACGCCCCTGGGTG...TCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAATCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp GCCAAGAGAATGGGCCACTGCATCCTGCCCCTGTGCTTGGTCTTGGGTCCAGCTCCTCCTTACAGGTCCTaGAGCATCCTTCCAAGGAAG +
Preference number: 4 (lower is better)
Translates to: AKRMGHCILPLCLVLGPAPPYRS*SILPRK
Trigger: CTTCCTTGGAAGGATGCTGCAGGACCTGTAAGGAGG...AGCTGGACCCAAGACCAAGCACAGGGGCAGGATGCAGTGGCCCATTCTCTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp CTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGTGCACAGAGCGCCGCTaGAGGCCCACCTCACGGCAG +
Preference number: 4 (lower is better)
Translates to: LPPLIPPFTLGQLETESGCTERR*RPTSRQ
Trigger: CTGCCGTGAGGTGGGCCTGCAGCGGCGCTCTGTGCA...CCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp ATGTTCATGCCCTTCGGTTCCACGTGGCACAAAGTGGCACAGGGGGTGGGAGACGGCAGTGCTGGGGCCTaGACAACCTTATGTTCATGC +
Preference number: 4 (lower is better)
Translates to: MFMPFGSTWHKVAQGVGDGSAGA*TTLCSC
Trigger: GCATGAACATAAGGTTGTGCAGGCCCCAGCACTGCC...GTCTCCCACCCCCTGTGCCACTTTGTGCCACGTGGAACCGAAGGGCATGAACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp ATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTGCAGGGGCACTCCTCTaGCAGGAAACATGCATCCCC +
Preference number: 4 (lower is better)
Translates to: IPPFTLGQLETESGAGRGAGALL*QETCIP
Trigger: GGGGATGCATGTTTCCTGCCAGAGGAGTGCCCCTGC...ACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp AATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGCACCGGCTGCCAAGCTaGATAGCTGATAGGGGCCCT +
Preference number: 4 (lower is better)
Translates to: NTPIHIGPAGNRKWGWQRHRLPS*IADRGP
Trigger: AGGGCCCCTATCAGCTATCCAGCTTGGCAGCCGGTG...CCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp CCTGGACCTAAAGCCCATTTTCCATCTCAAACCAGGGACAGAGGTGAGCTCCCTCAGCCCCCGAGGGCTTaGCATCCAGAAGGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: PGPKAHFPSQTRDRGELPQPPRA*HPEGGR
Trigger: TCTTCCGCCTTCTGGATGCCAAGCCCTCGGGGGCTG...AGGGAGCTCACCTCTGTCCCTGGTTTGAGATGGAAAATGGGCTTTAGGTCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp CTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGAGCGCCACTCGCAGATaGGGTAGGCAGCCCCCGAGG +
Preference number: 4 (lower is better)
Translates to: LPPLIPPFTLGQLETESGSATRR*GRQPPR
Trigger: CCTCGGGGGCTGCCTACCCCATCTGCGAGTGGCGCT...CCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp TACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTGTGGGCAACCCTTGACTaGGAGGGAGGGTCTCATTGC +
Preference number: 4 (lower is better)
Translates to: YPHSHWASWKQKVGLAEVWATLD*EGGSHC
Trigger: GCAATGAGACCCTCCCTCCCAGTCAAGGGTTGCCCA...CACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp TACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTGCCTCATCACTGGGAGTaGGCAACCCTTGACTGGGAG +
Preference number: 4 (lower is better)
Translates to: YPHSHWASWKQKVGLAEVPHHWE*ATLDWE
Trigger: CTCCCAGTCAAGGGTTGCCCACTCCCAGTGATGAGG...CACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp CAACCTTATGTTCATGCCCTTCGGTTCCACGTGGCACAAAGTGGCACAGGGGGTGCCTGGAGACACCACTaGCTCCTCAGTGGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: QPYVHALRFHVAQSGTGGAWRHH*LLSGCH
Trigger: GTGACAGCCACTGAGGAGCCAGTGGTGTCTCCAGGC...ACCCCCTGTGCCACTTTGTGCCACGTGGAACCGAAGGGCATGAACATAAGGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp ACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGGGTCTGGGTGGGGCCTaGAGACACCACTGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: TFNTPIHIGPAGNRKWGWGLGGA*RHHWLL
Trigger: GAGGAGCCAGTGGTGTCTCCAGGCCCCACCCAGACC...CCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp ACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCGCAGGGTGGTCTGGGTaGGGCCTGGAGACACCACTG +
Preference number: 4 (lower is better)
Translates to: TTFNTPIHIGPAGNRKWGAGWSG*GLETPL
Trigger: CAGTGGTGTCTCCAGGCCCCACCCAGACCACCCTGC...GCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp CCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTCAGTCACTCCCTTGCTaGCTGGGGACTCCGTGGGGC +
Preference number: 4 (lower is better)
Translates to: PPLIPPFTLGQLETESGAQSLPC*LGTPWG
Trigger: GCCCCACGGAGTCCCCAGCCAGCAAGGGAGTGACTG...AGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp AAAGGCCAAGAGAATGGGCCACTGCATCCTGCCCCTGTGCTTGGTCTTGGGTCCCAGTTAGAGGGGTGCTaGGACTTGAAGCACTCTGGG +
Preference number: 4 (lower is better)
Translates to: KGQENGPLHPAPVLGLGSQLEGC*DLKHSG
Trigger: CCCAGAGTGCTTCAAGTCCCAGCACCCCTCTAACTG...GGACCCAAGACCAAGCACAGGGGCAGGATGCAGTGGCCCATTCTCTTGGCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp CTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGGTGGTATGCTGGGCTaGGCGGGGTGGTGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: LPPLIPPFTLGQLETESGGGMLG*AGWCRG
Trigger: CCCTCTGCACCACCCCGCCCAGCCCAGCATACCACC...CCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp ACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGGCCATGGTGGTATGCTaGGCTGGGCGGGGTGGTGCA +
Preference number: 4 (lower is better)
Translates to: TFNTPIHIGPAGNRKWGWAMVVC*AGRGGA
Trigger: TGCACCACCCCGCCCAGCCCAGCATACCACCATGGC...CCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp TTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGACCTGGTGGCCATGGTaGTATGCTGGGCTGGGCGGG +
Preference number: 4 (lower is better)
Translates to: FNTPIHIGPAGNRKWGWQTWWPW*YAGLGG
Trigger: CCCGCCCAGCCCAGCATACCACCATGGCCACCAGGT...CTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp CCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCCAGATGTGCCCACCTTaGCCAGGGGCAGGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: PLIPPFTLGQLETESGAGQMCPP*PGAGWC
Trigger: ACACCAGCCTGCCCCTGGCCAAGGTGGGCACATCTG...GCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp GGCCCTAGAATCCACCATCTTTGTCTTTGGGAACTCCTTCTGGGCAGCCATCTGGTGGGTGGGTGCGCCTaGGTCATTGCTGCTGGAGTG +
Preference number: 4 (lower is better)
Translates to: GPRIHHLCLWELLLGSHLVGGCA*VIAAGV
Trigger: CACTCCAGCAGCAATGACCCAGGCGCACCCACCCAC...CAGATGGCTGCCCAGAAGGAGTTCCCAAAGACAAAGATGGTGGATTCTAGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp TACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTGGCTGCTGCACGTACTTaGTGTCCCGGATCCACAGCT +
Preference number: 4 (lower is better)
Translates to: YPHSHWASWKQKVGLAEVAAART*CPGSTA
Trigger: AGCTGTGGATCCGGGACACCAAGTACGTGCAGCAGC...CACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp CCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTCCCTCGCCCAGCACCTaGCAGTGCTCTGGGTCCAGA +
Preference number: 4 (lower is better)
Translates to: PPLIPPFTLGQLETESGAPSPST*QCSGSR
Trigger: TCTGGACCCAGAGCACTGCCAGGTGCTGGGCGAGGG...AGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp CAGCCATCTGCAGGCCTGAGTGTTGCAGGTATAGCCCTCTTTCCTTTTACTGTGGGGGCTTCAGCCTGCTaGCCTCCCACGACTGTAGCC +
Preference number: 4 (lower is better)
Translates to: QPSAGLSVAGIALFPFTVGASAC*PPTTVA
Trigger: GGCTACAGTCGTGGGAGGCCAGCAGGCTGAAGCCCC...CACAGTAAAAGGAAAGAGGGCTATACCTGCAACACTCAGGCCTGCAGATGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp ACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCGGGGCTTCAGCCTGCTaGCCTCCCACGACTGTAGCC +
Preference number: 4 (lower is better)
Translates to: TTFNTPIHIGPAGNRKWGGASAC*PPTTVA
Trigger: GGCTACAGTCGTGGGAGGCCAGCAGGCTGAAGCCCC...GCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp CCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCGGAAGTTGTGGGCCCTaGAGGCTGGTTAGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: PLIPPFTLGQLETESGAGGSCGP*RLVRGL
Trigger: CAGGCCCCTAACCAGCCTCCAGGGCCCACAACTTCC...GCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp TCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGAAGGGCCGCCCTGCCTaGGCACACGCCCGGGCATAC +
Preference number: 4 (lower is better)
Translates to: STTFNTPIHIGPAGNRKWKGRPA*AHARAY
Trigger: GTATGCCCGGGCGTGTGCCCAGGCAGGGCGGCCCTT...CCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp CCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGACAGTGCACAGGCTaGCAGGCGGGCGCGGAAATC +
Preference number: 4 (lower is better)
Translates to: PPLIPPFTLGQLETESGAGQCTG*QAGAEI
Trigger: GATTTCCGCGCCCGCCTGCCAGCCTGTGCACTGTCC...AGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp CAGGGCAGTGCTGGGGCCTGCACAACCTTATGTTCATGCCCTTCGGTTCCACGTAGGGGCTATACTCCTTaGAGGCCTCACAGGACAGTG +
Preference number: 4 (lower is better)
Translates to: QGSAGACTTLCSCPSVPRRGYTP*RPHRTV
Trigger: CACTGTCCTGTGAGGCCTCCAAGGAGTATAGCCCCT...ACGTGGAACCGAAGGGCATGAACATAAGGTTGTGCAGGCCCCAGCACTGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp ACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGGGGTGCAGGGTGCACTaGAATGAGCCCCGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: TFNTPIHIGPAGNRKWGWGCRVH*NEPRWH
Trigger: GTGCCAGCGGGGCTCATTCCAGTGCACCCTGCACCC...CCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp CCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCCATAGGCAGTGCAGGTaGAGGCGCAAGGGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: PLIPPFTLGQLETESGAGHRQCR*RRKGAG
Trigger: CCCTGCACCCTTGCGCCTCCACCTGCACTGCCTATG...GCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp AATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGATGGTGTCTGGGGCTTaGCACTGGTGCTGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: NTPIHIGPAGNRKWGWQRMVSGA*HWCWQQ
Trigger: CTGCTGCCAGCACCAGTGCCAAGCCCCAGACACCAT...CCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp AATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGCGGGACAATGGTGTCTaGGGCTTGGCACTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: NTPIHIGPAGNRKWGWQRRDNGV*GLALVL
Trigger: CAGCACCAGTGCCAAGCCCCAGACACCATTGTCCCG...CCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp CTGAGCCCGACTCTGTCATGGCCTTGGAGAAAAGGCACACTGCAAAGCCTGGAGACTCACAGCTGTAGCTaGGGCAGCAGGAGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: LSPTLSWPWRKGTLQSLETHSCS*GSRSPP
Trigger: AGGAGGACTCCTGCTGCCCCAGCTACAGCTGTGAGT...CTCCAGGCTTTGCAGTGTGCCTTTTCTCCAAGGCCATGACAGAGTCGGGCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp CAGGGCAGTGCTGGGGCCTGCACAACCTTATGTTCATGCCCTTCGGTTCCACGTTGGTTCGCCTCACAGTaGATGTCACAGAGCACGGAG +
Preference number: 4 (lower is better)
Translates to: QGSAGACTTLCSCPSVPRWFASQ*MSQSTE
Trigger: CTCCGTGCTCTGTGACATCCACTGTGAGGCGAACCA...ACGTGGAACCGAAGGGCATGAACATAAGGTTGTGCAGGCCCCAGCACTGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp ACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGGTGCTGCTGCAGTGGTaGCGGGCGCAGTCTGCGATC +
Preference number: 4 (lower is better)
Translates to: TFNTPIHIGPAGNRKWGWVLLQW*RAQSAI
Trigger: GATCGCAGACTGCGCCCGCCACCACTGCAGCAGCAC...CCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp CAGCCATCTGCAGGCCTGAGTGTTGCAGGTATAGCCCTCTTTCCTTTTACTGTGGCGGTGGGCAGCTTATaGGAGAGCGGACCAGCACGG +
Preference number: 4 (lower is better)
Translates to: QPSAGLSVAGIALFPFTVAVGSL*ESGPAR
Trigger: CCGTGCTGGTCCGCTCTCCCATAAGCTGCCCACCGC...CACAGTAAAAGGAAAGAGGGCTATACCTGCAACACTCAGGCCTGCAGATGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp CAACCTTATGTTCATGCCCTTCGGTTCCACGTGGCACAAAGTGGCACAGGGGGTGTAGATGCTGGCGGATaGGCACCTCCCATCGCAGGA +
Preference number: 4 (lower is better)
Translates to: QPYVHALRFHVAQSGTGGVDAGG*APPIAG
Trigger: TCCTGCGATGGGAGGTGCCCATCCGCCAGCATCTAC...ACCCCCTGTGCCACTTTGTGCCACGTGGAACCGAAGGGCATGAACATAAGGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp CCACGTGGCACAAAGTGGCACAGGGGGTGGGAGACTTGCAGAGTGGGGTGTGGATCTTGGGTCCAGCTGTaGTTCCCATGTAAGCACCAT +
Preference number: 4 (lower is better)
Translates to: PRGTKWHRGWETCRVGCGSWVQL*FPCKHH
Trigger: ATGGTGCTTACATGGGAACCACAGCTGGACCCAAGA...TCCACACCCCACTCTGCAAGTCTCCCACCCCCTGTGCCACTTTGTGCCACGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp GCCAAGAGAATGGGCCACTGCATCCTGCCCCTGTGCTTGGTCTTGGGTCCAGCTCTTGGTGAGACAACCTaGGCCCTAGAATCCACCATC +
Preference number: 4 (lower is better)
Translates to: AKRMGHCILPLCLVLGPALGETT*ALESTI
Trigger: GATGGTGGATTCTAGGGCCCAGGTTGTCTCACCAAG...AGCTGGACCCAAGACCAAGCACAGGGGCAGGATGCAGTGGCCCATTCTCTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp CCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCCGGCCTGCCTGCTaGGAAGGTTGCCTTGGGGTA +
Preference number: 4 (lower is better)
Translates to: PPLIPPFTLGQLETESGAGRPAC*EGCLGV
Trigger: TACCCCAAGGCAACCTTCCCAGCAGGCAGGCCGGCC...AGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp ATGTTCATGCCCTTCGGTTCCACGTGGCACAAAGTGGCACAGGGGGTGGGAGACATGGAGCACAGAGACTaGCACTGGCTGAGCCACACA +
Preference number: 4 (lower is better)
Translates to: MFMPFGSTWHKVAQGVGDMEHRD*HWLSHT
Trigger: TGTGTGGCTCAGCCAGTGCCAGTCTCTGTGCTCCAT...GTCTCCCACCCCCTGTGCCACTTTGTGCCACGTGGAACCGAAGGGCATGAACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR TCA 90 bp ACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCGGAGTGGGCAACCCTTaGCTGGGAGGGAGGGTCTCA +
Preference number: 4 (lower is better)
Translates to: TTFNTPIHIGPAGNRKWGGVGNP*LGGRVS
Trigger: TGAGACCCTCCCTCCCAGTCAAGGGTTGCCCACTCC...GCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp CCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCCCTGGGGCTTTCCTGTaGCAGCTGTGGCTCCTCATC +
Preference number: 4 (lower is better)
Translates to: PLIPPFTLGQLETESGAGPGAFL*QLWLLI
Trigger: GATGAGGAGCCACAGCTGTCACAGGAAAGCCCCAGG...GCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp AGGCTGCTGCCCCTGGACCTAAAGCCCATTTTCCATCTCAAACCAGGGACAGAGTGCAACAGGGAGGGATaGGGACTCTGGTGTATGGGG +
Preference number: 4 (lower is better)
Translates to: RLLPLDLKPIFHLKPGTECNREG*GLWCMG
Trigger: CCCCATACACCAGAGTCCTCATCCCTCCCTGTTGCA...CTCTGTCCCTGGTTTGAGATGGAAAATGGGCTTTAGGTCCAGGGGCAGCAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR TCA 90 bp GGCTCCTCTGAGCCCGACTCTGTCATGGCCTTGGAGAAAAGGCACACTGCAAAGTGGTTGCAAGGGGACTaGCAGGAACCTGTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: GSSEPDSVMALEKRHTAKWLQGD*QEPVLL
Trigger: CAGCAGAACAGGTTCCTGTCAGTCCCCTTGCAACCA...CTTTGCAGTGTGCCTTTTCTCCAAGGCCATGACAGAGTCGGGCTCAGAGGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR TCA 90 bp CCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCTGGCCTCCACGATCATaGGTCCTGAGCTGTGGAGCC +
Preference number: 4 (lower is better)
Translates to: PLIPPFTLGQLETESGAGWPPRS*VLSCGA
Trigger: GGCTCCACAGCTCAGGACTCATGATCGTGGAGGCCA...GCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp ACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGGGAGCAGGTGTAGGGTaGAGAGCCACACTGCGGGTC +
Preference number: 4 (lower is better)
Translates to: TFNTPIHIGPAGNRKWGWGAGVG*RATLRV
Trigger: GACCCGCAGTGTGGCTCTTCACCCTACACCTGCTCC...CCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp TACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTGGGGTACAGAGTCCCGTaGAACTCACAGGGACACTCA +
Preference number: 4 (lower is better)
Translates to: YPHSHWASWKQKVGLAEVGYRVP*NSQGHS
Trigger: TGAGTGTCCCTGTGAGTTTCACGGGACTCTGTACCC...CACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp CCAACAGACACTCTCTTGCTAAACAGTCCCATGGAGCACAGAGACTGGCACTGGTCTGCAATGTCACGGTaGAGGTGCCCGAAGAGCGGC +
Preference number: 4 (lower is better)
Translates to: PTDTLLLNSPMEHRDWHWSAMSR*RCPKSG
Trigger: GCCGCTCTTCGGGCACCTTCACCGTGACATTGCAGA...CCAGTGCCAGTCTCTGTGCTCCATGGGACTGTTTAGCAAGAGAGTGTCTGTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR TCA 90 bp CCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCTCTGCAATGTCACGGTaGAGGTGCCCGAAGAGCGGC +
Preference number: 4 (lower is better)
Translates to: PLIPPFTLGQLETESGAGSAMSR*RCPKSG
Trigger: GCCGCTCTTCGGGCACCTTCACCGTGACATTGCAGA...GCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp ACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCCAGGGTGCACTGGAATaGGCCCCGCTGGCACACACA +
Preference number: 4 (lower is better)
Translates to: TTFNTPIHIGPAGNRKWGQGALE*APLAHT
Trigger: TGTGTGTGCCAGCGGGGCTCATTCCAGTGCACCCTG...GCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp AATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTCTCCACGCTGTGCATaGACTCCTCATCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: NTPIHIGPAGNRKWGWQRSPRCA*TPHPAG
Trigger: CCCAGCTGGATGAGGAGTTCATGCACAGCGTGGAGA...CCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp AATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTCTGGTAGAAGTTGGTaGGAGGGTCGAGCACGGTGG +
Preference number: 4 (lower is better)
Translates to: NTPIHIGPAGNRKWGWQRSGRSW*EGRARW
Trigger: CCACCGTGCTCGACCCTCTCACCAACTTCTACCAGA...CCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp GGGTCCAGCTGTGGTTCCCATGTAAGCACCATGCACCTTCCCATCTTCCCACAGGAGACTGGCACTGGCTaGGCCACACAACCCATAATC +
Preference number: 4 (lower is better)
Translates to: GSSCGSHVSTMHLPIFPQETGTG*ATQPII
Trigger: GATTATGGGTTGTGTGGCTCAGCCAGTGCCAGTCTC...CTGTGGGAAGATGGGAAGGTGCATGGTGCTTACATGGGAACCACAGCTGGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp CCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCCCGTGTGCAGGTCGCTaGAGTTCACGAAGACCTGGC +
Preference number: 4 (lower is better)
Translates to: PLIPPFTLGQLETESGAGPCAGR*SSRRPG
Trigger: GCCAGGTCTTCGTGAACTGCAGCGACCTGCACACGG...GCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp TACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTGCTCAGGTTCAGCAGTTaGTGCTCACACGTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: YPHSHWASWKQKVGLAEVLRFSS*CSHVLS
Trigger: GGAGAGGACGTGTGAGCAGCAACTGCTGAACCTGAG...CACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp AATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGCAACTGCAGCCCAACTaGTGCCAAACTCCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: NTPIHIGPAGNRKWGWQRQLQPN*CQTPGG
Trigger: ACCCCCAGGAGTTTGGCAGCAGTTGGGCTGCAGTTG...CCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp TACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTGGTCTGGGCACTCAACTaGAGCCCAACTGCTGCCAAA +
Preference number: 4 (lower is better)
Translates to: YPHSHWASWKQKVGLAEVVWALN*SPTAAK
Trigger: TTTGGCAGCAGTTGGGCTGCAGTTGAGTGCCCAGAC...CACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp GGACGCTCTGGTTCAGTGACAAGGATCTCACAAGTGCTCAGGGAGGCTGGGGCTGAAGCTCACAATGTCTaGTGGCGCCACATCCTCTGT +
Preference number: 4 (lower is better)
Translates to: GRSGSVTRISQVLREAGAEAHNV*WRHILC
Trigger: ACAGAGGATGTGGCGCCAGCAGACATTGTGAGCTTC...AGCCCCAGCCTCCCTGAGCACTTGTGAGATCCTTGTCACTGAACCAGAGCGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp AATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGAAGGTGTCACGGCCCTaGCACTTAGCCAGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: NTPIHIGPAGNRKWGWQRKVSRP*HLASSR
Trigger: TCTGGAGCTGGCTAAGTGGCAGGGCCGTGACACCTT...CCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp ACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGCCGTGTCCCCCGGTaGAGCAAGAAGGAGGCATGC +
Preference number: 4 (lower is better)
Translates to: TTFNTPIHIGPAGNRKWGCRVPR*SKKEAC
Trigger: GCATGCCTCCTTCTTGCTGCACCGGGGGACACGGCA...GCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp AATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGCCAGGTGTGGGTGTCTaGAGTGCAACAGGGAGGGAT +
Preference number: 4 (lower is better)
Translates to: NTPIHIGPAGNRKWGWQRPGVGV*SATGRD
Trigger: ATCCCTCCCTGTTGCACTGCAGACACCCACACCTGG...CCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp ATGTTCATGCCCTTCGGTTCCACGTGGCACAAAGTGGCACAGGGGGTGGGAGACGACAGGAACCTGTTCTaGTGCTGTTCCAGCCACAGT +
Preference number: 4 (lower is better)
Translates to: MFMPFGSTWHKVAQGVGDDRNLF*CCSSHS
Trigger: ACTGTGGCTGGAACAGCAGCAGAACAGGTTCCTGTC...GTCTCCCACCCCCTGTGCCACTTTGTGCCACGTGGAACCGAAGGGCATGAACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp CTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGCCCATGGGCTGGCTGTaGCCGGCTTCGCCCTTCTCT +
Preference number: 4 (lower is better)
Translates to: LPPLIPPFTLGQLETESGPMGWL*PASPFS
Trigger: AGAGAAGGGCGAAGCCGGGCACAGCCAGCCCATGGG...CCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp CAACCTTATGTTCATGCCCTTCGGTTCCACGTGGCACAAAGTGGCACAGGGGGTGTGCGCCTGGGTCATTaGTGCTGGAGTGAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: QPYVHALRFHVAQSGTGGVRLGH*CWSERQ
Trigger: CTGCCTTTCACTCCAGCAGCAATGACCCAGGCGCAC...ACCCCCTGTGCCACTTTGTGCCACGTGGAACCGAAGGGCATGAACATAAGGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp CCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCCCAAACCCTCTACGATaGTCAGGGCTGGGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: PLIPPFTLGQLETESGAGPNPLR*SGLGLS
Trigger: GCTCAGCCCCAGCCCTGAGCATCGTAGAGGGTTTGG...GCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp CCAGGCACCTTTCTTTGGACTACAGGAGATGCGAAGGTCACTGAGCTCACTCTGTGGCGGACGCAGTCCTaGTCGGCGATTGGAACACAG +
Preference number: 4 (lower is better)
Translates to: PGTFLWTTGDAKVTELTLWRTQS*SAIGTQ
Trigger: CTGTGTTCCAATCGCCGAGCAGGACTGCGTCCGCCA...CAGAGTGAGCTCAGTGACCTTCGCATCTCCTGTAGTCCAAAGAAAGGTGCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp TACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTGGGTGGCCACACAGGCTaGAAGTCCACAGTCACCTTT +
Preference number: 4 (lower is better)
Translates to: YPHSHWASWKQKVGLAEVGGHTG*KSTVTF
Trigger: AAAGGTGACTGTGGACTTGCAGCCTGTGTGGCCACC...CACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp CCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGGGAGCTGGGCACCTaGCAGCTGTCCAGAAAGGGA +
Preference number: 4 (lower is better)
Translates to: PLIPPFTLGQLETESGAGRELGT*QLSRKG
Trigger: TCCCTTTCTGGACAGCTGGCAGGTGCCCAGCTCCCT...GCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp TTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGGTGCCCAGGCCACACTaGACTTGGGGACAGCGGAAG +
Preference number: 4 (lower is better)
Translates to: FNTPIHIGPAGNRKWGWQVPRPH*TWGQRK
Trigger: CTTCCGCTGTCCCCAAGTGCAGTGTGGCCTGGGCAC...CTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp CAGATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGACCGCAGGGACTCGGCTaGCTGCTCACCCCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: QISTTFNTPIHIGPAGNRPQGLG*LLTPGQ
Trigger: CTGCCCTGGGGTGAGCAGGCAGCCGAGTCCCTGCGG...TCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAATCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp TACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTGTCACAGAAGGCTGGGTaGACACACTCGCCTCCATTG +
Preference number: 4 (lower is better)
Translates to: YPHSHWASWKQKVGLAEVSQKAG*THSPPL
Trigger: CAATGGAGGCGAGTGTGTGCACCCAGCCTTCTGTGA...CACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp TTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAATGTCTCCACGTGGTaGTGCCCCCACGCCCGGCAA +
Preference number: 4 (lower is better)
Translates to: FNTPIHIGPAGNRKWGWQNVSTW*CPHARQ
Trigger: TTGCCGGGCGTGGGGGCAGCACCACGTGGAGACATT...CTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp TACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTGGGTGAAGAGCCACACTaGGGGTCATTGTGTACCTGG +
Preference number: 4 (lower is better)
Translates to: YPHSHWASWKQKVGLAEVGEEPH*GSLCTW
Trigger: CCAGGTACACAATGACCCGCAGTGTGGCTCTTCACC...CACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp CTTATGTTCATGCCCTTCGGTTCCACGTGGCACAAAGTGGCACAGGGGGTGGGATTAGGGGCCTGCTCCTaGCAGCTGTGCACAAACTCA +
Preference number: 4 (lower is better)
Translates to: LMFMPFGSTWHKVAQGVGLGACS*QLCTNS
Trigger: TGAGTTTGTGCACAGCTGGCAGGAGCAGGCCCCTAA...TCCCACCCCCTGTGCCACTTTGTGCCACGTGGAACCGAAGGGCATGAACATAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp CCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCTGGTTAGGGGCCTaGTCCTGCCAGCTGTGCACA +
Preference number: 4 (lower is better)
Translates to: PPLIPPFTLGQLETESGAGWLGA*SCQLCT
Trigger: TGTGCACAGCTGGCAGGAGCAGGCCCCTAACCAGCC...AGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp AATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTGCTCGTACACGCCCTaGATGGTTCCTGGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: NTPIHIGPAGNRKWGWQRCSYTP*MVPGFC
Trigger: GCAGAACCCAGGAACCATGCAGGGCGTGTACGAGCA...CCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp CTTATGTTCATGCCCTTCGGTTCCACGTGGCACAAAGTGGCACAGGGGGTGGGAAGTAGAGCCTCACACTaGTCGTACACGCCCTGCATG +
Preference number: 4 (lower is better)
Translates to: LMFMPFGSTWHKVAQGVGSRASH*SYTPCM
Trigger: CATGCAGGGCGTGTACGAGCAGTGTGAGGCTCTACT...TCCCACCCCCTGTGCCACTTTGTGCCACGTGGAACCGAAGGGCATGAACATAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp ACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCACTGTCCACACAGGATaGCCGGGGATGGCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: TTFNTPIHIGPAGNRKWGTVHTG*PGMAGG
Trigger: GCCTCCTGCCATCCCCGGGCATCCTGTGTGGACAGT...GCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp TACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTGCTCCGAGGGTCCTGGTaGAGAATCACTGACACTGAC +
Preference number: 4 (lower is better)
Translates to: YPHSHWASWKQKVGLAEVLRGSW*RITDTD
Trigger: GTCAGTGTCAGTGATTCTGCACCAGGACCCTCGGAG...CACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp ATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTCATCGCTGGTCCACTTaGAGGTACAGTCGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: IPPFTLGQLETESGAGRGHRWST*RYSRSP
Trigger: AGGGCTCCGACTGTACCTGCAAGTGGACCAGCGATG...ACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp ACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGGAGGCGGCTTGCAGGTaGACATCGCAGGGGTCCAGA +
Preference number: 4 (lower is better)
Translates to: TFNTPIHIGPAGNRKWGWEAACR*TSQGSR
Trigger: TCTGGACCCCTGCGATGTGCACCTGCAAGCCGCCTC...CCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp ACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCGAGGCGGCTTGCAGGTaGACATCGCAGGGGTCCAGA +
Preference number: 4 (lower is better)
Translates to: TTFNTPIHIGPAGNRKWGEAACR*TSQGSR
Trigger: TCTGGACCCCTGCGATGTGCACCTGCAAGCCGCCTC...GCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp TACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTGCCACACACTCGTCTCTaGTCAGGTCATCGCCACCAT +
Preference number: 4 (lower is better)
Translates to: YPHSHWASWKQKVGLAEVPHTRL*SGHRHH
Trigger: ATGGTGGCGATGACCTGAGCAGAGACGAGTGTGTGG...CACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp ACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCGCAAGGGTGCAGGGTaGACTGGAATGAGCCCCGCT +
Preference number: 4 (lower is better)
Translates to: TFNTPIHIGPAGNRKWGWRKGAG*TGMSPA
Trigger: AGCGGGGCTCATTCCAGTGCACCCTGCACCCTTGCG...CCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp CAACCTTATGTTCATGCCCTTCGGTTCCACGTGGCACAAAGTGGCACAGGGGGTGGAGCCCATCAAACGTaGGGTAATGCCGGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: QPYVHALRFHVAQSGTGGGAHQT*GNAGPH
Trigger: ATGGGGACCGGCATTACCGCACGTTTGATGGGCTCC...ACCCCCTGTGCCACTTTGTGCCACGTGGAACCGAAGGGCATGAACATAAGGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp CTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGACTGTCTGGCCGGGCTaGATCACACCCAGCTCGCGG +
Preference number: 4 (lower is better)
Translates to: LPPLIPPFTLGQLETESGTVWPG*ITPSSR
Trigger: CCGCGAGCTGGGTGTGATGCAGCCCGGCCAGACAGT...CCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp CTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGGTCGAGCACGGTGGTaGAGCGGGAGGTGTGGCACA +
Preference number: 4 (lower is better)
Translates to: LPPLIPPFTLGQLETESGGRARW*SGRCGT
Trigger: TGTGCCACACCTCCCGCTGCACCACCGTGCTCGACC...CCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp ACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGGTGGCACAGAAGAGCTaGACAGAGCGCCGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: TFNTPIHIGPAGNRKWGWVAQKS*TERRCR
Trigger: CCTGCAGCGGCGCTCTGTGCAGCTCTTCTGTGCCAC...CCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp GGGTCCAGCTGTGGTTCCCATGTAAGCACCATGCACCTTCCCATCTTCCCACAGTGGCACTTTCCCATGTaGGGAAAATGGGGAGCCCAG +
Preference number: 4 (lower is better)
Translates to: GSSCGSHVSTMHLPIFPQWHFPM*GKWGAQ
Trigger: CTGGGCTCCCCATTTTCCGCACATGGGAAAGTGCCA...CTGTGGGAAGATGGGAAGGTGCATGGTGCTTACATGGGAACCACAGCTGGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp GGCTCCTCTGAGCCCGACTCTGTCATGGCCTTGGAGAAAAGGCACACTGCAAAGCCTGGACGTGCACTGTaGTTCTCTGGTCCCACAAGA +
Preference number: 4 (lower is better)
Translates to: GSSEPDSVMALEKRHTAKPGRAL*FSGPTR
Trigger: TCTTGTGGGACCAGAGAACCACAGTGCACGTCCAGG...CTTTGCAGTGTGCCTTTTCTCCAAGGCCATGACAGAGTCGGGCTCAGAGGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp AATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGAGGATCGAGGGTGTCTaGGCACTCAACTGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: NTPIHIGPAGNRKWGWQRRIEGV*ALNCSP
Trigger: TGGGCTGCAGTTGAGTGCCCAGACACCCTCGATCCT...CCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp ATGTTCATGCCCTTCGGTTCCACGTGGCACAAAGTGGCACAGGGGGTGGGAGACCATAAGCGGAGACGCTaGCACAGAAGCACTCACAGT +
Preference number: 4 (lower is better)
Translates to: MFMPFGSTWHKVAQGVGDHKRRR*HRSTHS
Trigger: ACTGTGAGTGCTTCTGTGCCAGCGTCTCCGCTTATG...GTCTCCCACCCCCTGTGCCACTTTGTGCCACGTGGAACCGAAGGGCATGAACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp GGGTCCAGCTGTGGTTCCCATGTAAGCACCATGCACCTTCCCATCTTCCCACAGGCTCACAATGTCTGCTaGCGCCACATCCTCTGTCCT +
Preference number: 4 (lower is better)
Translates to: GSSCGSHVSTMHLPIFPQAHNVC*RHILCP
Trigger: AGGACAGAGGATGTGGCGCCAGCAGACATTGTGAGC...CTGTGGGAAGATGGGAAGGTGCATGGTGCTTACATGGGAACCACAGCTGGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp CAACCTTATGTTCATGCCCTTCGGTTCCACGTGGCACAAAGTGGCACAGGGGGTCTGGGTCATGGGCCTTaGCCTTGTACAGAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: QPYVHALRFHVAQSGTGGLGHGP*PCTEQL
Trigger: CAGCTGCTCTGTACAAGGCCAAGGCCCATGACCCAG...ACCCCCTGTGCCACTTTGTGCCACGTGGAACCGAAGGGCATGAACATAAGGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp ACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCCAGCCCCCGAGGGCTTaGCATCCAGAAGGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: TTFNTPIHIGPAGNRKWGQPPRA*HPEGGR
Trigger: TCTTCCGCCTTCTGGATGCCAAGCCCTCGGGGGCTG...GCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp CCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCTTTGGAAGCAGGGGCTaGCACAGGCATCGTAGCGCC +
Preference number: 4 (lower is better)
Translates to: PLIPPFTLGQLETESGAGFGSRG*HRHRSA
Trigger: GGCGCTACGATGCCTGTGCCAGCCCCTGCTTCCAAA...GCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp CTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGCAGTCACTCCCTTGCTaGCTGGGGACTCCGTGGGGC +
Preference number: 4 (lower is better)
Translates to: LPPLIPPFTLGQLETESGQSLPC*LGTPWG
Trigger: GCCCCACGGAGTCCCCAGCCAGCAAGGGAGTGACTG...CCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp GGCTCCTCTGAGCCCGACTCTGTCATGGCCTTGGAGAAAAGGCACACTGCAAAGACACCATGCCAGGTGTaGGTGTCTGCAGTGCAACAG +
Preference number: 4 (lower is better)
Translates to: GSSEPDSVMALEKRHTAKTPCQV*VSAVQQ
Trigger: CTGTTGCACTGCAGACACCCACACCTGGCATGGTGT...CTTTGCAGTGTGCCTTTTCTCCAAGGCCATGACAGAGTCGGGCTCAGAGGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp AACCTTATGTTCATGCCCTTCGGTTCCACGTGGCACAAAGTGGCACAGGGGGTGTGTCAAGGAGGGCTGTaGGGGTGTCGTCCTAACAGG +
Preference number: 4 (lower is better)
Translates to: NLMFMPFGSTWHKVAQGVCQGGL*GCRPNR
Trigger: CCTGTTAGGACGACACCCCCACAGCCCTCCTTGACA...CACCCCCTGTGCCACTTTGTGCCACGTGGAACCGAAGGGCATGAACATAAGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp ACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCAGGAGGTGGGGGACCTaGAGATGGCTCCAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: TTFNTPIHIGPAGNRKWGRRWGT*RWLQGK
Trigger: CTTCCCCTGGAGCCATCTCCAGGTCCCCCACCTCCT...GCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp ACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGAGGAGGTGGGGGACCTaGAGATGGCTCCAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: TFNTPIHIGPAGNRKWGWRRWGT*RWLQGK
Trigger: CTTCCCCTGGAGCCATCTCCAGGTCCCCCACCTCCT...CCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp ACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCGTCAGCACAGCCTTGTaGGATCCCGAGGAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: TTFNTPIHIGPAGNRKWGVSTAL*DPEEVG
Trigger: CCCCACCTCCTCGGGATCCCACAAGGCTGTGCTGAC...GCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp ACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGGTCAGCACAGCCTTGTaGGATCCCGAGGAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: TFNTPIHIGPAGNRKWGWVSTAL*DPEEVG
Trigger: CCCCACCTCCTCGGGATCCCACAAGGCTGTGCTGAC...CCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp ATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGGGCGAGCCCATGGGCTaGCTGTGCCCGGCTTCGCCC +
Preference number: 4 (lower is better)
Translates to: ISTTFNTPIHIGPAGNRKGEPMG*LCPASP
Trigger: GGGCGAAGCCGGGCACAGCCAGCCCATGGGCTCGCC...CTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp AGATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAGGCGAGCCCATGGGCTaGCTGTGCCCGGCTTCGCCC +
Preference number: 4 (lower is better)
Translates to: RFLPPLIPPFTLGQLETEGEPMG*LCPASP
Trigger: GGGCGAAGCCGGGCACAGCCAGCCCATGGGCTCGCC...TTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAATCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp AATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGAGGCCAGAGAGGAGCTaGGAGGGACGAGTTGACTCA +
Preference number: 4 (lower is better)
Translates to: NTPIHIGPAGNRKWGWQRRPERS*EGRVDS
Trigger: TGAGTCAACTCGTCCCTCCCAGCTCCTCTCTGGCCT...CCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp TTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGACAGATGTGCCCACCTTaGCCAGGGGCAGGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: LIPPFTLGQLETESGAGRQMCPP*PGAGWC
Trigger: ACACCAGCCTGCCCCTGGCCAAGGTGGGCACATCTG...TCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp ACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGGTGGGTGGGTGCGCCTaGGTCATTGCTGCTGGAGTG +
Preference number: 4 (lower is better)
Translates to: TFNTPIHIGPAGNRKWGWVGGCA*VIAAGV
Trigger: CACTCCAGCAGCAATGACCCAGGCGCACCCACCCAC...CCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp CAACCTTATGTTCATGCCCTTCGGTTCCACGTGGCACAAAGTGGCACAGGGGGTGGACAACAGATACCATaGAGGCCGTGCCCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: QPYVHALRFHVAQSGTGGGQQIP*RPCPQP
Trigger: TGGCTGAGGGCACGGCCTCCATGGTATCTGTTGTCC...ACCCCCTGTGCCACTTTGTGCCACGTGGAACCGAAGGGCATGAACATAAGGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp TACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTGTGGCCACCTTCCCTGTaGTGCTCTTTCGTGGGACAA +
Preference number: 4 (lower is better)
Translates to: YPHSHWASWKQKVGLAEVWPPSL*CSFVGQ
Trigger: TTGTCCCACGAAAGAGCACCACAGGGAAGGTGGCCA...CACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp GGACGCTCTGGTTCAGTGACAAGGATCTCACAAGTGCTCAGGGAGGCTGGGGCTGCAGAGACACTTGCTTaGATAGGATGGCCACCTTCC +
Preference number: 4 (lower is better)
Translates to: GRSGSVTRISQVLREAGAAETLA*IGWPPS
Trigger: GGAAGGTGGCCATCCTATCCAAGCAAGTGTCTCTGC...AGCCCCAGCCTCCCTGAGCACTTGTGAGATCCTTGTCACTGAACCAGAGCGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp AATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGATAGGATGTGGGCACTaGCAGAGCTGTGCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: NTPIHIGPAGNRKWGWQRIGCGH*QSCACL
Trigger: CAGGCAGGCACAGCTCTGCCAGTGCCCACATCCTAT...CCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp CAGCCATCTGCAGGCCTGAGTGTTGCAGGTATAGCCCTCTTTCCTTTTACTGTGACCAGCATGCTGTCTTaGGGGGCCGTCCTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: QPSAGLSVAGIALFPFTVTSMLS*GAVLAE
Trigger: CTCAGCCAGGACGGCCCCCCAAGACAGCATGCTGGT...CACAGTAAAAGGAAAGAGGGCTATACCTGCAACACTCAGGCCTGCAGATGGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp CTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGCCCTCCAGGCAGATGTaGCGGACGCAGTCCTGCTCG +
Preference number: 4 (lower is better)
Translates to: LPPLIPPFTLGQLETESGPSRQM*RTQSCS
Trigger: CGAGCAGGACTGCGTCCGCCACATCTGCCTGGAGGG...CCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp TTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGCCCTGGGCCTTGCTaGTTTTGCTGGCCTCCACGA +
Preference number: 4 (lower is better)
Translates to: LIPPFTLGQLETESGAGRGPGPC*FCWPPR
Trigger: TCGTGGAGGCCAGCAAAACCAGCAAGGCCCAGGGCC...TCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp TCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGTGTGGCGCAGCTGTCTaGGCGGAAGCGGGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: STTFNTPIHIGPAGNRKWCGAAV*AEAGLA
Trigger: GGCCAGACCCGCTTCCGCCCAGACAGCTGCGCCACA...CCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp TTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGGCGAGCAGTCAGTTGTaGCGCAGCTGTCTGGGCGGA +
Preference number: 4 (lower is better)
Translates to: FNTPIHIGPAGNRKWGWQASSQL*RSCLGG
Trigger: TCCGCCCAGACAGCTGCGCCACAACTGACTGCTCGC...CTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp TACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTGCACATGCCTGGTATGTaGAGTCGCTGGAGCACAGGA +
Preference number: 4 (lower is better)
Translates to: YPHSHWASWKQKVGLAEVHMPGM*SRWSTG
Trigger: TCCTGTGCTCCAGCGACTCCACATACCAGGCATGTG...CACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp TACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTGCATCCTGGCATGTCTTaGGTGGCTCACAGGCTGTCA +
Preference number: 4 (lower is better)
Translates to: YPHSHWASWKQKVGLAEVHPGMS*VAHRLS
Trigger: TGACAGCCTGTGAGCCACCCAAGACATGCCAGGATG...CACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp CTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGGCGCCGGTGTAAGATaGTGCCCTCGGAGCAGACGC +
Preference number: 4 (lower is better)
Translates to: LPPLIPPFTLGQLETESGGAGVR*CPRSRR
Trigger: GCGTCTGCTCCGAGGGCACCATCTTACACCGGCGCC...CCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp CTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCAAGGGTCGCCTCCTaGTGGCTGCTGCTGGGTTGC +
Preference number: 4 (lower is better)
Translates to: LPPLIPPFTLGQLETESGARVAS*WLLLGC
Trigger: GCAACCCAGCAGCAGCCACCAGGAGGCGACCCTTGC...CCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399397.6
CDS-3UTR CCA 90 bp ATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTGCATTGTACACCATCTaGCAGCGCGGTCCAGTGGCA +
Preference number: 4 (lower is better)
Translates to: IPPFTLGQLETESGAGRGALYTI*QRGPVA
Trigger: TGCCACTGGACCGCGCTGCCAGATGGTGTACAATGC...ACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp ACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGTCAAATGTCTCCACGTaGTGCTGCCCCCACGCCCGG +
Preference number: 4 (lower is better)
Translates to: TFNTPIHIGPAGNRKWGWSNVST*CCPHAR
Trigger: CCGGGCGTGGGGGCAGCACCACGTGGAGACATTTGA...CCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp CAGGGCAGTGCTGGGGCCTGCACAACCTTATGTTCATGCCCTTCGGTTCCACGTCATTGTGTACCTGGATaGAGAAGCTCTGTCCCTCGG +
Preference number: 4 (lower is better)
Translates to: QGSAGACTTLCSCPSVPRHCVPG*RSSVPR
Trigger: CCGAGGGACAGAGCTTCTCCATCCAGGTACACAATG...ACGTGGAACCGAAGGGCATGAACATAAGGTTGTGCAGGCCCCAGCACTGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp ATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTGCTCCCCATGACATGTaGCAGTTGGACCCTCATGCC +
Preference number: 4 (lower is better)
Translates to: IPPFTLGQLETESGAGRGAPHDM*QLDPHA
Trigger: GGCATGAGGGTCCAACTGCCACATGTCATGGGGAGC...ACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp CCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTACAGGGACACTCAGCTaGTGCCACGCAGCCCCCATC +
Preference number: 4 (lower is better)
Translates to: PPLIPPFTLGQLETESGATGTLS*CHAAPI
Trigger: GATGGGGGCTGCGTGGCACCAGCTGAGTGTCCCTGT...AGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp GGCTCCTCTGAGCCCGACTCTGTCATGGCCTTGGAGAAAAGGCACACTGCAAAGACACAGGCTCCATCTTaGTTCAGGCCACATGGGGCA +
Preference number: 4 (lower is better)
Translates to: GSSEPDSVMALEKRHTAKTQAPS*FRPHGA
Trigger: TGCCCCATGTGGCCTGAACCAAGATGGAGCCTGTGT...CTTTGCAGTGTGCCTTTTCTCCAAGGCCATGACAGAGTCGGGCTCAGAGGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp GCCAAGAGAATGGGCCACTGCATCCTGCCCCTGTGCTTGGTCTTGGGTCCAGCTATCACTGACACTGACTaGACACAGGCTCCATCTTGG +
Preference number: 4 (lower is better)
Translates to: AKRMGHCILPLCLVLGPAITDTD*TQAPSW
Trigger: CCAAGATGGAGCCTGTGTCCAGTCAGTGTCAGTGAT...AGCTGGACCCAAGACCAAGCACAGGGGCAGGATGCAGTGGCCCATTCTCTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp TACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTGTGCCTCCGAGGGTCCTaGTGCAGAATCACTGACACT +
Preference number: 4 (lower is better)
Translates to: YPHSHWASWKQKVGLAEVCLRGS*CRITDT
Trigger: AGTGTCAGTGATTCTGCACCAGGACCCTCGGAGGCA...CACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp AGCTGTGGTTCCCATGTAAGCACCATGCACCTTCCCATCTTCCCACAGCTCTCAAAGTGGCAGGAGCACTaGTTCCGGGGGACACAGAGG +
Preference number: 4 (lower is better)
Translates to: SCGSHVSTMHLPIFPQLSKWQEH*FRGTQR
Trigger: CCTCTGTGTCCCCCGGAACCAGTGCTCCTGCCACTT...TGAGAGCTGTGGGAAGATGGGAAGGTGCATGGTGCTTACATGGGAACCACAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp ACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCATAGGCAGTGCAGGTaGAGGCGCAAGGGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: TFNTPIHIGPAGNRKWGWHRQCR*RRKGAG
Trigger: CCCTGCACCCTTGCGCCTCCACCTGCACTGCCTATG...CCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp TTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGACAGTGCAGGCGCACTTaGCCTCCGGGATGCAGAGTG +
Preference number: 4 (lower is better)
Translates to: LIPPFTLGQLETESGAGRQCRRT*PPGCRV
Trigger: CACTCTGCATCCCGGAGGCCAAGTGCGCCTGCACTG...TCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp CTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGTCTGGGGCTTGGCACTaGTGCTGGCAGCAGCCGCTG +
Preference number: 4 (lower is better)
Translates to: LPPLIPPFTLGQLETESGSGAWH*CWQQPL
Trigger: CAGCGGCTGCTGCCAGCACCAGTGCCAAGCCCCAGA...CCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp AACCTTATGTTCATGCCCTTCGGTTCCACGTGGCACAAAGTGGCACAGGGGGTGGATCCACCGGGACAATaGTGTCTGGGGCTTGGCACT +
Preference number: 4 (lower is better)
Translates to: NLMFMPFGSTWHKVAQGVDPPGQ*CLGLGT
Trigger: AGTGCCAAGCCCCAGACACCATTGTCCCGGTGGATC...CACCCCCTGTGCCACTTTGTGCCACGTGGAACCGAAGGGCATGAACATAAGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp AGATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAGAGGAGGCGGTGGCCTaGGCGGCATGTGGGGGCGAG +
Preference number: 4 (lower is better)
Translates to: RFLPPLIPPFTLGQLETEEEAVA*AACGGE
Trigger: CTCGCCCCCACATGCCGCCCAGGCCACCGCCTCCTC...TTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAATCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp CAGATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGATGGGTGAGGAGGCGGTaGCCTGGGCGGCATGTGGGG +
Preference number: 4 (lower is better)
Translates to: QISTTFNTPIHIGPAGNRWVRRR*PGRHVG
Trigger: CCCCACATGCCGCCCAGGCCACCGCCTCCTCACCCA...TCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAATCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp ACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCCCCGTGATCAGGATCTaGTCCTGTCGGCAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: TTFNTPIHIGPAGNRKWGPVIRI*SCRQLG
Trigger: CCCCAGCTGCCGACAGGACCAGATCCTGATCACGGG...GCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp AATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGGATTTCTCCCACAGATaGCACCGGGGCACCGGGATT +
Preference number: 4 (lower is better)
Translates to: NTPIHIGPAGNRKWGWQRDFSHR*HRGTGI
Trigger: AATCCCGGTGCCCCGGTGCCATCTGTGGGAGAAATC...CCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp ACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCAGCTCCACCACTGTCTaGCCGGGCTGCATCACACCC +
Preference number: 4 (lower is better)
Translates to: TTFNTPIHIGPAGNRKWGSSTTV*PGCITP
Trigger: GGGTGTGATGCAGCCCGGCCAGACAGTGGTGGAGCT...GCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp TCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGAGGGTCGAGCACGGTaGTGCAGCGGGAGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: STTFNTPIHIGPAGNRKWEGRAR*CSGRCG
Trigger: GCCACACCTCCCGCTGCACCACCGTGCTCGACCCTC...CCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp CCAGGCACCTTTCTTTGGACTACAGGAGATGCGAAGGTCACTGAGCTCACTCTGTCCTGCCCCTGTGCTTaGTCTTGGGTCCAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: PGTFLWTTGDAKVTELTLSCPCA*SWVQLW
Trigger: CCACAGCTGGACCCAAGACCAAGCACAGGGGCAGGA...CAGAGTGAGCTCAGTGACCTTCGCATCTCCTGTAGTCCAAAGAAAGGTGCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR TCA 90 bp ATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTGGTCCCACAAGAGGGTaGTGTGCTCCTGTGGGAAAT +
Preference number: 4 (lower is better)
Translates to: IPPFTLGQLETESGAGRGGPTRG*CAPVGN
Trigger: ATTTCCCACAGGAGCACATCACCCTCTTGTGGGACC...ACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp CTTATGTTCATGCCCTTCGGTTCCACGTGGCACAAAGTGGCACAGGGGGTGGGATCTCAAACACCTCACTaGGCAGGATGCTGCACTCCT +
Preference number: 4 (lower is better)
Translates to: LMFMPFGSTWHKVAQGVGSQTPH*AGCCTP
Trigger: AGGAGTGCAGCATCCTGCTCAGTGAGGTGTTTGAGA...TCCCACCCCCTGTGCCACTTTGTGCCACGTGGAACCGAAGGGCATGAACATAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR TCA 90 bp AATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGCCGTTGGCTGTGACGTaGAGGAAGAAGTTGGGTCTG +
Preference number: 4 (lower is better)
Translates to: NTPIHIGPAGNRKWGWQRPLAVT*RKKLGL
Trigger: CAGACCCAACTTCTTCCTTCACGTCACAGCCAACGG...CCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp ACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGACTGGGCTAAGTGTCTaGGCAGGCAGAGTCGTGGCC +
Preference number: 4 (lower is better)
Translates to: TFNTPIHIGPAGNRKWGWTGLSV*AGRVVA
Trigger: GGCCACGACTCTGCCTGCTCAGACACTTAGCCCAGT...CCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp TTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAACTGGGCTAAGTGTCTaGGCAGGCAGAGTCGTGGCC +
Preference number: 4 (lower is better)
Translates to: LIPPFTLGQLETESGAGRTGLSV*AGRVVA
Trigger: GGCCACGACTCTGCCTGCTCAGACACTTAGCCCAGT...TCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp CCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTCAGGTCAGGGAAGATTaGGCACCGGCAGGCACACTC +
Preference number: 4 (lower is better)
Translates to: PPLIPPFTLGQLETESGAQVRED*APAGTL
Trigger: GAGTGTGCCTGCCGGTGCTCAATCTTCCCTGACCTG...AGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp ACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGAGCCCCACCCACCACTaGGCCATCCTTCAGGGTAAG +
Preference number: 4 (lower is better)
Translates to: TFNTPIHIGPAGNRKWGWSPTHH*AILQGK
Trigger: CTTACCCTGAAGGATGGCTCAGTGGTGGGTGGGGCT...CCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp CCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTAGCCCCACCCACCACTaGGCCATCCTTCAGGGTAAG +
Preference number: 4 (lower is better)
Translates to: PPLIPPFTLGQLETESGASPTHH*AILQGK
Trigger: CTTACCCTGAAGGATGGCTCAGTGGTGGGTGGGGCT...AGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp GGCTCCTCTGAGCCCGACTCTGTCATGGCCTTGGAGAAAAGGCACACTGCAAAGCACACTCGCCTCCATTaGAGCAGGAGAACAAGTAGG +
Preference number: 4 (lower is better)
Translates to: GSSEPDSVMALEKRHTAKHTRLH*SRRTSR
Trigger: CCTACTTGTTCTCCTGCTTCAATGGAGGCGAGTGTG...CTTTGCAGTGTGCCTTTTCTCCAAGGCCATGACAGAGTCGGGCTCAGAGGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR TCA 90 bp CCAACAGACACTCTCTTGCTAAACAGTCCCATGGAGCACAGAGACTGGCACTGGGCGGTCCAGTGGCATTaGAGCGTCTGCAGTCACAGA +
Preference number: 4 (lower is better)
Translates to: PTDTLLLNSPMEHRDWHWAVQWH*SVCSHR
Trigger: TCTGTGACTGCAGACGCTTCAATGCCACTGGACCGC...CCAGTGCCAGTCTCTGTGCTCCATGGGACTGTTTAGCAAGAGAGTGTCTGTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR TCA 90 bp CCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCTCATGCCTCCATGGGTaGCCTCCTTGGCCAGATGGA +
Preference number: 4 (lower is better)
Translates to: PLIPPFTLGQLETESGAGSCLHG*PPWPDG
Trigger: TCCATCTGGCCAAGGAGGTCACCCATGGAGGCATGA...GCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp TCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGACGCGCGCTCCCCATaGCATGTGGCAGTTGGACCC +
Preference number: 4 (lower is better)
Translates to: STTFNTPIHIGPAGNRKWDARSP*HVAVGP
Trigger: GGGTCCAACTGCCACATGTCATGGGGAGCGCGCGTC...CCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp CCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCCAGTGTGAAGGCTaGCTGATGCCGCACGATGAC +
Preference number: 4 (lower is better)
Translates to: PPLIPPFTLGQLETESGAGQCEG*LMPHDD
Trigger: GTCATCGTGCGGCATCAGTCAGCCTTCACACTGGCC...AGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp TTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGCCAGTGTGAAGGCTaGCTGATGCCGCACGATGAC +
Preference number: 4 (lower is better)
Translates to: LIPPFTLGQLETESGAGRGQCEG*LMPHDD
Trigger: GTCATCGTGCGGCATCAGTCAGCCTTCACACTGGCC...TCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp ACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCCATCCCAGGCCAGTGTaGAGGCTGACTGATGCCGCA +
Preference number: 4 (lower is better)
Translates to: TTFNTPIHIGPAGNRKWGHPRPV*RLTDAA
Trigger: TGCGGCATCAGTCAGCCTTCACACTGGCCTGGGATG...GCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp ACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCATCCCAGGCCAGTGTaGAGGCTGACTGATGCCGCA +
Preference number: 4 (lower is better)
Translates to: TFNTPIHIGPAGNRKWGWHPRPV*RLTDAA
Trigger: TGCGGCATCAGTCAGCCTTCACACTGGCCTGGGATG...CCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp AATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGAATGTCACCAGTCACTaGGCACTCAGCTGGGCAGAC +
Preference number: 4 (lower is better)
Translates to: NTPIHIGPAGNRKWGWQRNVTSH*ALSWAD
Trigger: GTCTGCCCAGCTGAGTGCTCAGTGACTGGTGACATT...CCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp ACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGGCACACGCCATCTGCTaGGAGCTCCACCACTGTCTG +
Preference number: 4 (lower is better)
Translates to: TFNTPIHIGPAGNRKWGWAHAIC*ELHHCL
Trigger: CAGACAGTGGTGGAGCTCTCAGCAGATGGCGTGTGC...CCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp AAAGGCCAAGAGAATGGGCCACTGCATCCTGCCCCTGTGCTTGGTCTTGGGTCCTTTCACAGATCTTGGTaGGACAACCTGGGCCCTAGA +
Preference number: 4 (lower is better)
Translates to: KGQENGPLHPAPVLGLGSFHRSW*DNLGPR
Trigger: TCTAGGGCCCAGGTTGTCTCACCAAGATCTGTGAAA...GGACCCAAGACCAAGCACAGGGGCAGGATGCAGTGGCCCATTCTCTTGGCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp ACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCCCGTGTGCAGGTCGCTaGAGTTCACGAAGACCTGGC +
Preference number: 4 (lower is better)
Translates to: TTFNTPIHIGPAGNRKWGPCAGR*SSRRPG
Trigger: GCCAGGTCTTCGTGAACTGCAGCGACCTGCACACGG...GCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp AGGCTGCTGCCCCTGGACCTAAAGCCCATTTTCCATCTCAAACCAGGGACAGAGAGGTTCAGCAGTTGCTaGTCACACGTCCTCTCCCTG +
Preference number: 4 (lower is better)
Translates to: RLLPLDLKPIFHLKPGTERFSSC*SHVLSL
Trigger: CAGGGAGAGGACGTGTGAGCAGCAACTGCTGAACCT...CTCTGTCCCTGGTTTGAGATGGAAAATGGGCTTTAGGTCCAGGGGCAGCAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp TTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGCCTTCCCCTTCCAAGTaGAGGGGCACTCCTCTGGCA +
Preference number: 4 (lower is better)
Translates to: FNTPIHIGPAGNRKWGWQPSPSK*RGTPLA
Trigger: TGCCAGAGGAGTGCCCCTGCACTTGGAAGGGGAAGG...CTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp CTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGGCCCAGCCTGGACGTaGACTGTGGTTCTCTGGTCC +
Preference number: 4 (lower is better)
Translates to: LPPLIPPFTLGQLETESGGPAWT*TVVLWS
Trigger: GGACCAGAGAACCACAGTGCACGTCCAGGCTGGGCC...CCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp CCTGGACCTAAAGCCCATTTTCCATCTCAAACCAGGGACAGAGGTGAGCTCCCTTCTGGAGGAGGGACTTaGTGTCAAGGAGGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: PGPKAHFPSQTRDRGELPSGGGT*CQGGLW
Trigger: CCACAGCCCTCCTTGACAGCAAGTCCCTCCTCCAGA...AGGGAGCTCACCTCTGTCCCTGGTTTGAGATGGAAAATGGGCTTTAGGTCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp TACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTGGACAGGAACCTGTTCTaGTGCTGTTCCAGCCACAGT +
Preference number: 4 (lower is better)
Translates to: YPHSHWASWKQKVGLAEVDRNLF*CCSSHS
Trigger: ACTGTGGCTGGAACAGCAGCAGAACAGGTTCCTGTC...CACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp ATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTCTCCAAGCTCCTGGTTaGAAGGGGACTGACAGGAAC +
Preference number: 4 (lower is better)
Translates to: IPPFTLGQLETESGAGRGLQAPG*KGTDRN
Trigger: GTTCCTGTCAGTCCCCTTGCAACCAGGAGCTTGGAG...ACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp ACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGAGGGAGCTGGGCACCTaGCAGCTGTCCAGAAAGGGA +
Preference number: 4 (lower is better)
Translates to: TFNTPIHIGPAGNRKWGWRELGT*QLSRKG
Trigger: TCCCTTTCTGGACAGCTGGCAGGTGCCCAGCTCCCT...CCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp TTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGCCCCACAGAACGGGTaGTGCGGCGAGGCGCTGCAC +
Preference number: 4 (lower is better)
Translates to: FLPPLIPPFTLGQLETESAPQNG*CGEALH
Trigger: GTGCAGCGCCTCGCCGCAGCACCCGTTCTGTGGGGC...ACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399397.6
CDS-3UTR GCA 90 bp ATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTGGTGAAGAGCCACACTaGGGGTCATTGTGTACCTGG +
Preference number: 4 (lower is better)
Translates to: IPPFTLGQLETESGAGRGGEEPH*GSLCTW
Trigger: CCAGGTACACAATGACCCGCAGTGTGGCTCTTCACC...ACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp TTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGCAGTGCACAGTGCATTaGCGGAGCTGGGTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: FNTPIHIGPAGNRKWGWQQCTVH*RSWVLQ
Trigger: CTGGAGGACCCAGCTCCGGCAATGCACTGTGCACTG...CTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp CCTGGACCTAAAGCCCATTTTCCATCTCAAACCAGGGACAGAGGTGAGCTCCCTGCCTTCTCCTTGCAGTaGACAGTGCATTGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: PGPKAHFPSQTRDRGELPAFSLQ*TVHCRS
Trigger: GCTCCGGCAATGCACTGTGCACTGCAAGGAGAAGGC...AGGGAGCTCACCTCTGTCCCTGGTTTGAGATGGAAAATGGGCTTTAGGTCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp ATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTTGCTGCACTCCCACTTaGCTGAGGTGCATGTGCAAG +
Preference number: 4 (lower is better)
Translates to: IPPFTLGQLETESGAGRGCCTPT*LRCMCK
Trigger: CTTGCACATGCACCTCAGGCAAGTGGGAGTGCAGCA...ACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp TTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGACTGGGCAGACAGCTGTaGTGCACTCCCACTTGCCTG +
Preference number: 4 (lower is better)
Translates to: LIPPFTLGQLETESGAGRLGRQL*CTPTCL
Trigger: CAGGCAAGTGGGAGTGCAGCACAGCTGTCTGCCCAG...TCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp ACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGAGCGGCAGGCATCCCTaGGGCACTGCTCAAAGTAGG +
Preference number: 4 (lower is better)
Translates to: TFNTPIHIGPAGNRKWGWSGRHP*GTAQSR
Trigger: CCTACTTTGAGCAGTGCCGCAGGGATGCCTGCCGCT...CCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp AGCTGTGGTTCCCATGTAAGCACCATGCACCTTCCCATCTTCCCACAGCTCTCAGTGCTCTTGACCAGGTaGACTTTGCATGCCCCCACG +
Preference number: 4 (lower is better)
Translates to: SCGSHVSTMHLPIFPQLSVLLTR*TLHAPT
Trigger: CGTGGGGGCATGCAAAGTGCACCTGGTCAAGAGCAC...TGAGAGCTGTGGGAAGATGGGAAGGTGCATGGTGCTTACATGGGAACCACAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp AGATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAGTGGCGGGCGCAGTCTaGGATCCAGGATGCCCCGGG +
Preference number: 4 (lower is better)
Translates to: RFLPPLIPPFTLGQLETEVAGAV*DPGCPG
Trigger: CCCGGGGCATCCTGGATCGCAGACTGCGCCCGCCAC...TTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAATCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp AGCTGTGGTTCCCATGTAAGCACCATGCACCTTCCCATCTTCCCACAGCTCTCAGGATGGTCACCTTCTTaGAGGAGCGCCCATCCTCCT +
Preference number: 4 (lower is better)
Translates to: SCGSHVSTMHLPIFPQLSGWSPS*RSAHPP
Trigger: AGGAGGATGGGCGCTCCTGCAAGAAGGTGACCATCC...TGAGAGCTGTGGGAAGATGGGAAGGTGCATGGTGCTTACATGGGAACCACAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp ATGTTCATGCCCTTCGGTTCCACGTGGCACAAAGTGGCACAGGGGGTGGGAGACCTAGGTTCACAGGGGTaGTGCTCCTGCATTCATTCT +
Preference number: 4 (lower is better)
Translates to: MFMPFGSTWHKVAQGVGDLGSQG*CSCIHS
Trigger: AGAATGAATGCAGGAGCAGCACCCCTGTGAACCTAG...GTCTCCCACCCCCTGTGCCACTTTGTGCCACGTGGAACCGAAGGGCATGAACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp AGGCTGCTGCCCCTGGACCTAAAGCCCATTTTCCATCTCAAACCAGGGACAGAGAAGAGAATGGGCCACTaGATCCTGCCCCTGTGCTTG +
Preference number: 4 (lower is better)
Translates to: RLLPLDLKPIFHLKPGTEKRMGH*ILPLCL
Trigger: CAAGCACAGGGGCAGGATGCAGTGGCCCATTCTCTT...CTCTGTCCCTGGTTTGAGATGGAAAATGGGCTTTAGGTCCAGGGGCAGCAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp TACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTGTGCAGGCCTGAGTGTTaGAGGTATAGCCCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: YPHSHWASWKQKVGLAEVCRPEC*RYSPLS
Trigger: GGAAAGAGGGCTATACCTGCAACACTCAGGCCTGCA...CACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp GGGTCCAGCTGTGGTTCCCATGTAAGCACCATGCACCTTCCCATCTTCCCACAGCAAGGAGACATCACCTaGTCCCCAGGGAAATACTCC +
Preference number: 4 (lower is better)
Translates to: GSSCGSHVSTMHLPIFPQQGDIT*SPGKYS
Trigger: GGAGTATTTCCCTGGGGACCAGGTGATGTCTCCTTG...CTGTGGGAAGATGGGAAGGTGCATGGTGCTTACATGGGAACCACAGCTGGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp CCTGGACCTAAAGCCCATTTTCCATCTCAAACCAGGGACAGAGGTGAGCTCCCTCCCACTCGCCATGTGTaGACCTCCTGCTTGTCATCC +
Preference number: 4 (lower is better)
Translates to: PGPKAHFPSQTRDRGELPPTRHV*TSCLSS
Trigger: GGATGACAAGCAGGAGGTCCACACATGGCGAGTGGG...AGGGAGCTCACCTCTGTCCCTGGTTTGAGATGGAAAATGGGCTTTAGGTCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp AAAGGCCAAGAGAATGGGCCACTGCATCCTGCCCCTGTGCTTGGTCTTGGGTCCGGTGATGTGCTCCTGTaGGAAATGCACCAGTGTGAA +
Preference number: 4 (lower is better)
Translates to: KGQENGPLHPAPVLGLGSGDVLL*EMHQCE
Trigger: TTCACACTGGTGCATTTCCCACAGGAGCACATCACC...GGACCCAAGACCAAGCACAGGGGCAGGATGCAGTGGCCCATTCTCTTGGCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp CTTATGTTCATGCCCTTCGGTTCCACGTGGCACAAAGTGGCACAGGGGGTGGGACTGCTGCCAAACTCCTaGGGGTTAGTTAGCTCTAGG +
Preference number: 4 (lower is better)
Translates to: LMFMPFGSTWHKVAQGVGLLPNS*GLVSSR
Trigger: CCTAGAGCTAACTAACCCCCAGGAGTTTGGCAGCAG...TCCCACCCCCTGTGCCACTTTGTGCCACGTGGAACCGAAGGGCATGAACATAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp AGCTGTGGTTCCCATGTAAGCACCATGCACCTTCCCATCTTCCCACAGCTCTCAAGGATCGAGGGTGTCTaGGCACTCAACTGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: SCGSHVSTMHLPIFPQLSRIEGV*ALNCSP
Trigger: TGGGCTGCAGTTGAGTGCCCAGACACCCTCGATCCT...TGAGAGCTGTGGGAAGATGGGAAGGTGCATGGTGCTTACATGGGAACCACAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp CCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTCACCGGCTGCCAAGCTaGATAGCTGATAGGGGCCCT +
Preference number: 4 (lower is better)
Translates to: PPLIPPFTLGQLETESGAHRLPS*IADRGP
Trigger: AGGGCCCCTATCAGCTATCCAGCTTGGCAGCCGGTG...AGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp CCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAAGGAGGCATGCTGTTaGAAGGTGTCACGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: PLIPPFTLGQLETESGAGKEACC*KVSRPC
Trigger: GCAGGGCCGTGACACCTTCCAACAGCATGCCTCCTT...GCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp AGCTGTGGTTCCCATGTAAGCACCATGCACCTTCCCATCTTCCCACAGCTCTCACCTCATCACTGGGAGTaGGCAACCCTTGACTGGGAG +
Preference number: 4 (lower is better)
Translates to: SCGSHVSTMHLPIFPQLSPHHWE*ATLDWE
Trigger: CTCCCAGTCAAGGGTTGCCCACTCCCAGTGATGAGG...TGAGAGCTGTGGGAAGATGGGAAGGTGCATGGTGCTTACATGGGAACCACAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp TCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGTGCTGCAGGGTGGTCTaGGTGGGGCCTGGAGACACC +
Preference number: 4 (lower is better)
Translates to: STTFNTPIHIGPAGNRKWCCRVV*VGPGDT
Trigger: GGTGTCTCCAGGCCCCACCCAGACCACCCTGCAGCA...CCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp ACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCCTGGTGTATGGGGGATaGCCAGGAGGCTGGCAGTCA +
Preference number: 4 (lower is better)
Translates to: TTFNTPIHIGPAGNRKWGLVYGG*PGGWQS
Trigger: TGACTGCCAGCCTCCTGGCCATCCCCCATACACCAG...GCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp CCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGAGGACTCTGGTGTATaGGGGATGGCCAGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: PPLIPPFTLGQLETESGAEDSGV*GMARRL
Trigger: CAGCCTCCTGGCCATCCCCCATACACCAGAGTCCTC...AGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp CAACCTTATGTTCATGCCCTTCGGTTCCACGTGGCACAAAGTGGCACAGGGGGTCCCTTGTTGTCTCCATaGCACCTGACACCATGCCAG +
Preference number: 4 (lower is better)
Translates to: QPYVHALRFHVAQSGTGGPLLSP*HLTPCQ
Trigger: CTGGCATGGTGTCAGGTGCCATGGAGACAACAAGGG...ACCCCCTGTGCCACTTTGTGCCACGTGGAACCGAAGGGCATGAACATAAGGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp ACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGGAGCTGGAGACCTGGTaGCCATGGTGGTATGCTGGG +
Preference number: 4 (lower is better)
Translates to: TFNTPIHIGPAGNRKWGWELETW*PWWYAG
Trigger: CCCAGCATACCACCATGGCCACCAGGTCTCCAGCTC...CCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp TTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTTGGCCAGGGGCAGGCTaGTGTCGGGAGGCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: FLPPLIPPFTLGQLETESWPGAG*CREAGQ
Trigger: CTGGCCTGCCTCCCGACACCAGCCTGCCCCTGGCCA...ACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp CCAGGCACCTTTCTTTGGACTACAGGAGATGCGAAGGTCACTGAGCTCACTCTGTGCTATGTGAGTGGGTaGGTGCGCCTGGGTCATTGC +
Preference number: 4 (lower is better)
Translates to: PGTFLWTTGDAKVTELTLCYVSG*VRLGHC
Trigger: GCAATGACCCAGGCGCACCCACCCACTCACATAGCA...CAGAGTGAGCTCAGTGACCTTCGCATCTCCTGTAGTCCAAAGAAAGGTGCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp CTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGGGGTGCTATGTGAGTaGGTGGGTGCGCCTGGGTCA +
Preference number: 4 (lower is better)
Translates to: LPPLIPPFTLGQLETESGGVLCE*VGAPGS
Trigger: TGACCCAGGCGCACCCACCCACTCACATAGCACCCC...CCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAG
56% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp AATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGCTTGCTTGGATAGGATaGCCACCTTCCCTGTGGTGC +
Preference number: 4 (lower is better)
Translates to: NTPIHIGPAGNRKWGWQRLAWIG*PPSLWC
Trigger: GCACCACAGGGAAGGTGGCCATCCTATCCAAGCAAG...CCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp TACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTGGCAGAGACACTTGCTTaGATAGGATGGCCACCTTCC +
Preference number: 4 (lower is better)
Translates to: YPHSHWASWKQKVGLAEVAETLA*IGWPPS
Trigger: GGAAGGTGGCCATCCTATCCAAGCAAGTGTCTCTGC...CACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp CCAACAGACACTCTCTTGCTAAACAGTCCCATGGAGCACAGAGACTGGCACTGGATAGGATGTGGGCACTaGCAGAGCTGTGCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: PTDTLLLNSPMEHRDWHWIGCGH*QSCACL
Trigger: CAGGCAGGCACAGCTCTGCCAGTGCCCACATCCTAT...CCAGTGCCAGTCTCTGTGCTCCATGGGACTGTTTAGCAAGAGAGTGTCTGTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp ATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTCTGGCATGTCTTGGGTaGCTCACAGGCTGTCACACA +
Preference number: 4 (lower is better)
Translates to: IPPFTLGQLETESGAGRGLACLG*LTGCHT
Trigger: TGTGTGACAGCCTGTGAGCCACCCAAGACATGCCAG...ACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp ATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTATGCAGAGTGCAGAGTaGCGCCGGTGTAAGATGGTG +
Preference number: 4 (lower is better)
Translates to: IPPFTLGQLETESGAGRGMQSAE*RRCKMV
Trigger: CACCATCTTACACCGGCGCCACTCTGCACTCTGCAT...ACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp ATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTAGGCCACACTGCACTTaGGGACAGCGGAAGTTCTCA +
Preference number: 4 (lower is better)
Translates to: IPPFTLGQLETESGAGRGRPHCT*GQRKFS
Trigger: TGAGAACTTCCGCTGTCCCCAAGTGCAGTGTGGCCT...ACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp TCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGCATGGCCACGGAGTCTaGGGCTTCAGCCTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: STTFNTPIHIGPAGNRKWHGHGV*GFSLLA
Trigger: GGCCAGCAGGCTGAAGCCCCAGACTCCGTGGCCATG...CCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp CCAACAGACACTCTCTTGCTAAACAGTCCCATGGAGCACAGAGACTGGCACTGGAGGATGGTGCACACTTaGCCCGATGGAGCCGCCTTT +
Preference number: 4 (lower is better)
Translates to: PTDTLLLNSPMEHRDWHWRMVHT*PDGAAF
Trigger: AAAGGCGGCTCCATCGGGCCAAGTGTGCACCATCCT...CCAGTGCCAGTCTCTGTGCTCCATGGGACTGTTTAGCAAGAGAGTGTCTGTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp CCAGGCACCTTTCTTTGGACTACAGGAGATGCGAAGGTCACTGAGCTCACTCTGGCATTGTACACCATCTaGCAGCGCGGTCCAGTGGCA +
Preference number: 4 (lower is better)
Translates to: PGTFLWTTGDAKVTELTLALYTI*QRGPVA
Trigger: TGCCACTGGACCGCGCTGCCAGATGGTGTACAATGC...CAGAGTGAGCTCAGTGACCTTCGCATCTCCTGTAGTCCAAAGAAAGGTGCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp GGCTCCTCTGAGCCCGACTCTGTCATGGCCTTGGAGAAAAGGCACACTGCAAAGGGGTCATTGTGTACCTaGATGGAGAAGCTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: GSSEPDSVMALEKRHTAKGSLCT*MEKLCP
Trigger: GGGACAGAGCTTCTCCATCCAGGTACACAATGACCC...CTTTGCAGTGTGCCTTTTCTCCAAGGCCATGACAGAGTCGGGCTCAGAGGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp TTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGTGCATTGCCGGAGCTaGGTCCTCCAGCCTTGCAAG +
Preference number: 4 (lower is better)
Translates to: LIPPFTLGQLETESGAGRVHCRS*VLQPCK
Trigger: CTTGCAAGGCTGGAGGACCCAGCTCCGGCAATGCAC...TCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp GCCAAGAGAATGGGCCACTGCATCCTGCCCCTGTGCTTGGTCTTGGGTCCAGCTGGCATCATCTGTGTATaGCGGGATGATCTTGTACTG +
Preference number: 4 (lower is better)
Translates to: AKRMGHCILPLCLVLGPAGIICV*RDDLVL
Trigger: CAGTACAAGATCATCCCGCCATACACAGATGATGCC...AGCTGGACCCAAGACCAAGCACAGGGGCAGGATGCAGTGGCCCATTCTCTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp AATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTCCTCCACCCATCGCTaGTCCACTTGCAGGTACAGT +
Preference number: 4 (lower is better)
Translates to: NTPIHIGPAGNRKWGWQRSSTHR*STCRYS
Trigger: ACTGTACCTGCAAGTGGACCAGCGATGGGTGGAGGA...CCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp AGATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAATCAACGGGGAGCCCATaGCGCCGGCACAGGTGGGCG +
Preference number: 4 (lower is better)
Translates to: RFLPPLIPPFTLGQLETESTGSP*RRHRWA
Trigger: CGCCCACCTGTGCCGGCGCCATGGGCTCCCCGTTGA...TTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAATCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp TCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGCACAGGCCTCAGGGCTaGCCAGGTCCTGGCAGGTAC +
Preference number: 4 (lower is better)
Translates to: STTFNTPIHIGPAGNRKWHRPQG*PGPGRY
Trigger: GTACCTGCCAGGACCTGGCCAGCCCTGAGGCCTGTG...CCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp CTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGCAGATAGGTGTCCGGTaGGCAGGCACAGCCCTCCAC +
Preference number: 4 (lower is better)
Translates to: LPPLIPPFTLGQLETESGQIGVR*AGTALH
Trigger: GTGGAGGGCTGTGCCTGCCCACCGGACACCTATCTG...CCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp ACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGAAGTGGCAGGAGCACTaGTTCCGGGGGACACAGAGG +
Preference number: 4 (lower is better)
Translates to: TFNTPIHIGPAGNRKWGWKWQEH*FRGTQR
Trigger: CCTCTGTGTCCCCCGGAACCAGTGCTCCTGCCACTT...CCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp ACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTCCACTCCCTGGAAGTaGCAGGAGCACTGGTTCCGG +
Preference number: 4 (lower is better)
Translates to: TTFNTPIHIGPAGNRKWGSTPWK*QEHWFR
Trigger: CCGGAACCAGTGCTCCTGCCACTTCCAGGGAGTGGA...GCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp ACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGATGGTGTCTGGGGCTTaGCACTGGTGCTGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: TFNTPIHIGPAGNRKWGWMVSGA*HWCWQQ
Trigger: CTGCTGCCAGCACCAGTGCCAAGCCCCAGACACCAT...CCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp CTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGGCAGCAGGGGTCCTTaGTGGGTAGGAGCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: LPPLIPPFTLGQLETESGGSRGP*WVGARP
Trigger: TGGCCTTGCTCCTACCCACCAAGGACCCCTGCTGCC...CCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp ATGTTCATGCCCTTCGGTTCCACGTGGCACAAAGTGGCACAGGGGGTGGGAGACCCCTCACACAGAGTCTaGTTACACACACAGACAGTC +
Preference number: 4 (lower is better)
Translates to: MFMPFGSTWHKVAQGVGDPSHRV*LHTQTV
Trigger: GACTGTCTGTGTGTGTAACCAGACTCTGTGTGAGGG...GTCTCCCACCCCCTGTGCCACTTTGTGCCACGTGGAACCGAAGGGCATGAACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp CCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCACTCACAGCTGTAGCTaGGGCAGCAGGAGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: PLIPPFTLGQLETESGAGTHSCS*GSRSPP
Trigger: AGGAGGACTCCTGCTGCCCCAGCTACAGCTGTGAGT...GCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp CAACCTTATGTTCATGCCCTTCGGTTCCACGTGGCACAAAGTGGCACAGGGGGTGGATGGTCATGCGGATaGTCACCTTCTTGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: QPYVHALRFHVAQSGTGGGWSCG*SPSCRS
Trigger: GCTCCTGCAAGAAGGTGACCATCCGCATGACCATCC...ACCCCCTGTGCCACTTTGTGCCACGTGGAACCGAAGGGCATGAACATAAGGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp TTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGGTAGATGCTGGCGGATaGGCACCTCCCATCGCAGGA +
Preference number: 4 (lower is better)
Translates to: FNTPIHIGPAGNRKWGWQVDAGG*APPIAG
Trigger: TCCTGCGATGGGAGGTGCCCATCCGCCAGCATCTAC...CTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp TTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGACCTGGTGGCTGCTGCTaGAGGAAACACGAGTCTGCG +
Preference number: 4 (lower is better)
Translates to: LIPPFTLGQLETESGAGRPGGCC*RKHESA
Trigger: CGCAGACTCGTGTTTCCTCCAGCAGCAGCCACCAGG...TCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp GGCTCCTCTGAGCCCGACTCTGTCATGGCCTTGGAGAAAAGGCACACTGCAAAGAGCCCGACTCTGTCATaGCCTTGGAGAAAAGGCACA +
Preference number: 4 (lower is better)
Translates to: GSSEPDSVMALEKRHTAKSPTLS*PWRKGT
Trigger: TGTGCCTTTTCTCCAAGGCCATGACAGAGTCGGGCT...CTTTGCAGTGTGCCTTTTCTCCAAGGCCATGACAGAGTCGGGCTCAGAGGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR TCA 90 bp CCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGAGTTGAGATGCAGTaGGCTCCAGTGGCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: PPLIPPFTLGQLETESGAGVEMQ*APVAAA
Trigger: TGCAGCAGCCACTGGAGCTCACTGCATCTCAACTCC...AGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp CCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTTGCAACAGGGAGGGATaGGGACTCTGGTGTATGGGG +
Preference number: 4 (lower is better)
Translates to: PPLIPPFTLGQLETESGACNREG*GLWCMG
Trigger: CCCCATACACCAGAGTCCTCATCCCTCCCTGTTGCA...AGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp ACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGTTGACTCAAGGGACATaGAGGGTGTGGCTGCCAGCC +
Preference number: 4 (lower is better)
Translates to: TFNTPIHIGPAGNRKWGWLTQGT*RVWLPA
Trigger: GGCTGGCAGCCACACCCTTCATGTCCCTTGAGTCAA...CCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp ACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCGGACAGTGCTGGGACTaGTTCACGCGAATCAGCTGG +
Preference number: 4 (lower is better)
Translates to: TTFNTPIHIGPAGNRKWGGQCWD*FTRISW
Trigger: CCAGCTGATTCGCGTGAATCAGTCCCAGCACTGTCC...GCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp GGCCCTAGAATCCACCATCTTTGTCTTTGGGAACTCCTTCTGGGCAGCCATCTGTGTAGATGGCCTCCTTaGACAGAGCTACGTGGCTCC +
Preference number: 4 (lower is better)
Translates to: GPRIHHLCLWELLLGSHLCRWPP*TELRGS
Trigger: GGAGCCACGTAGCTCTGTTCAAGGAGGCCATCTACA...CAGATGGCTGCCCAGAAGGAGTTCCCAAAGACAAAGATGGTGGATTCTAGGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR TCA 90 bp CCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGCGGTCCAGTGGCATTaGAGCGTCTGCAGTCACAGA +
Preference number: 4 (lower is better)
Translates to: PPLIPPFTLGQLETESGAAVQWH*SVCSHR
Trigger: TCTGTGACTGCAGACGCTTCAATGCCACTGGACCGC...AGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp ACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTCATGCCTCCATGGGTaGCCTCCTTGGCCAGATGGA +
Preference number: 4 (lower is better)
Translates to: TTFNTPIHIGPAGNRKWGSCLHG*PPWPDG
Trigger: TCCATCTGGCCAAGGAGGTCACCCATGGAGGCATGA...GCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp CAGATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAGACGCGCGCTCCCCATaGCATGTGGCAGTTGGACCC +
Preference number: 4 (lower is better)
Translates to: QISTTFNTPIHIGPAGNRDARSP*HVAVGP
Trigger: GGGTCCAACTGCCACATGTCATGGGGAGCGCGCGTC...TCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAATCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp CCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTACTGATGCCGCACGATaGCATAGCCGGCAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: PPLIPPFTLGQLETESGATDAAR*HSRQAA
Trigger: AGCAGCTTGCCGGCTATGTCATCGTGCGGCATCAGT...AGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp CCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCGGGTACAGAGTCCCGTaGAACTCACAGGGACACTCA +
Preference number: 4 (lower is better)
Translates to: PLIPPFTLGQLETESGAGGYRVP*NSQGHS
Trigger: TGAGTGTCCCTGTGAGTTTCACGGGACTCTGTACCC...GCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp ATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTGCACTCCCACTTGCCTaGGGTGCATGTGCAAGTATT +
Preference number: 4 (lower is better)
Translates to: IPPFTLGQLETESGAGRGALPLA*GACASI
Trigger: AATACTTGCACATGCACCTCAGGCAAGTGGGAGTGC...ACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp TTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGTTGGCCAGGATGTACTaGCATGTGGCGGGGAACGTG +
Preference number: 4 (lower is better)
Translates to: FNTPIHIGPAGNRKWGWQLARMY*HVAGNV
Trigger: CACGTTCCCCGCCACATGTCAGTACATCCTGGCCAA...CTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp CCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCTGCCATTGGGGAAGGTaGAGAGACAGGACACGTTCC +
Preference number: 4 (lower is better)
Translates to: PLIPPFTLGQLETESGAGCHWGR*RDRTRS
Trigger: GGAACGTGTCCTGTCTCTTCACCTTCCCCAATGGCA...GCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp ACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCCAACTGCAGCCCAACTaGTGCCAAACTCCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: TTFNTPIHIGPAGNRKWGQLQPN*CQTPGG
Trigger: ACCCCCAGGAGTTTGGCAGCAGTTGGGCTGCAGTTG...GCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp TTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGATCAACAGCCACCCCATaGTGGCAACACTGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: LIPPFTLGQLETESGAGRSTATP*WQHWWA
Trigger: TGCCCACCAGTGTTGCCAGCATGGGGTGGCTGTTGA...TCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp ACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTCAACAGCCACCCCATaGTGGCAACACTGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: TTFNTPIHIGPAGNRKWGSTATP*WQHWWA
Trigger: TGCCCACCAGTGTTGCCAGCATGGGGTGGCTGTTGA...GCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp CAGCCATCTGCAGGCCTGAGTGTTGCAGGTATAGCCCTCTTTCCTTTTACTGTGGTTGGGTCTGTCTGCTaGCTCCAGGGACACCACATC +
Preference number: 4 (lower is better)
Translates to: QPSAGLSVAGIALFPFTVVGSVC*LQGHHI
Trigger: GATGTGGTGTCCCTGGAGGCAGCAGACAGACCCAAC...CACAGTAAAAGGAAAGAGGGCTATACCTGCAACACTCAGGCCTGCAGATGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp CCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGTTGGGTCTGTCTGCTaGCTCCAGGGACACCACATC +
Preference number: 4 (lower is better)
Translates to: PPLIPPFTLGQLETESGAVGSVC*LQGHHI
Trigger: GATGTGGTGTCCCTGGAGGCAGCAGACAGACCCAAC...AGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp CCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGAAGTTGGGTCTGTCTaGTGCCTCCAGGGACACCAC +
Preference number: 4 (lower is better)
Translates to: PPLIPPFTLGQLETESGAEVGSV*CLQGHH
Trigger: GTGGTGTCCCTGGAGGCAGCAGACAGACCCAACTTC...AGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp CAGCCATCTGCAGGCCTGAGTGTTGCAGGTATAGCCCTCTTTCCTTTTACTGTGGAGGGAGGGTCTCATTaGCAAGGGCCTCTGTGGGAA +
Preference number: 4 (lower is better)
Translates to: QPSAGLSVAGIALFPFTVEGGSH*QGPLWE
Trigger: TTCCCACAGAGGCCCTTGGCAATGAGACCCTCCCTC...CACAGTAAAAGGAAAGAGGGCTATACCTGCAACACTCAGGCCTGCAGATGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp CAGATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAGCTCCAGTGGCTGCTaGAGGGTGGTCTGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: QISTTFNTPIHIGPAGNRSSSGC*RVVWVG
Trigger: CCCCACCCAGACCACCCTGCAGCAGCCACTGGAGCT...TCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAATCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp CTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGGCGGGGAGTTGAGATaGAGTGAGCTCCAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: LPPLIPPFTLGQLETESGGGELR*SELQWL
Trigger: CAGCCACTGGAGCTCACTGCATCTCAACTCCCCGCC...CCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp CCAACAGACACTCTCTTGCTAAACAGTCCCATGGAGCACAGAGACTGGCACTGGCTCCAAGCTCCTGGTTaGAAGGGGACTGACAGGAAC +
Preference number: 4 (lower is better)
Translates to: PTDTLLLNSPMEHRDWHWLQAPG*KGTDRN
Trigger: GTTCCTGTCAGTCCCCTTGCAACCAGGAGCTTGGAG...CCAGTGCCAGTCTCTGTGCTCCATGGGACTGTTTAGCAAGAGAGTGTCTGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp TTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGGTGCGCCTGGGTCATTaGTGCTGGAGTGAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: FNTPIHIGPAGNRKWGWQVRLGH*CWSERQ
Trigger: CTGCCTTTCACTCCAGCAGCAATGACCCAGGCGCAC...CTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp TTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTCTCGTCCACCGGCTCTaGTGCCAGGTGAGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: FLPPLIPPFTLGQLETESLVHRL*CQVRPC
Trigger: GCAGGGCCTCACCTGGCAGCAGAGCCGGTGGACGAG...ACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp ACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCGGCCTCAGTGGTAGTTaGCAAAGCCTCCGCCAAACC +
Preference number: 4 (lower is better)
Translates to: TTFNTPIHIGPAGNRKWGGLSGS*QSLRQT
Trigger: GGTTTGGCGGAGGCTTTGGCAACTACCACTGAGGCC...GCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp CCAACAGACACTCTCTTGCTAAACAGTCCCATGGAGCACAGAGACTGGCACTGGGGTGGCCACACAGGCTaGAAGTCCACAGTCACCTTT +
Preference number: 4 (lower is better)
Translates to: PTDTLLLNSPMEHRDWHWGGHTG*KSTVTF
Trigger: AAAGGTGACTGTGGACTTGCAGCCTGTGTGGCCACC...CCAGTGCCAGTCTCTGTGCTCCATGGGACTGTTTAGCAAGAGAGTGTCTGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp ATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTACAGGCTGTCACACATaGCTGGTATGTGGAGTCGCT +
Preference number: 4 (lower is better)
Translates to: IPPFTLGQLETESGAGRGTGCHT*LVCGVA
Trigger: AGCGACTCCACATACCAGGCATGTGTGACAGCCTGT...ACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp TCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGACTTGGCCTCCGGGATaGAGAGTGCAGAGTGGCGCC +
Preference number: 4 (lower is better)
Translates to: STTFNTPIHIGPAGNRKWTWPPG*RVQSGA
Trigger: GGCGCCACTCTGCACTCTGCATCCCGGAGGCCAAGT...CCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp TTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGTCCGTGGTATTCCTGTaGACAGTGAGCGCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: FNTPIHIGPAGNRKWGWQSVVFL*TVSASP
Trigger: AGGGGAGGCGCTCACTGTGCACAGGAATACCACGGA...CTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp TTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGCATCGCTGGTCCACTTaGAGGTACAGTCGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: FNTPIHIGPAGNRKWGWQHRWST*RYSRSP
Trigger: AGGGCTCCGACTGTACCTGCAAGTGGACCAGCGATG...CTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp TACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTGCAAAAAGTTGTGGGGTaGTCTCAGGTACACCCACTG +
Preference number: 4 (lower is better)
Translates to: YPHSHWASWKQKVGLAEVQKVVG*SQVHPL
Trigger: CAGTGGGTGTACCTGAGAGCACCCCACAACTTTTTG...CACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp TTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGCCTCACAGGACAGTaGACAGGCTGGCAGGCGGGC +
Preference number: 4 (lower is better)
Translates to: FLPPLIPPFTLGQLETESGLTGQ*TGWQAG
Trigger: GCCCGCCTGCCAGCCTGTGCACTGTCCTGTGAGGCC...ACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp CCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCCCACACACTCGTCTCTaGTCAGGTCATCGCCACCAT +
Preference number: 4 (lower is better)
Translates to: PLIPPFTLGQLETESGAGPHTRL*SGHRHH
Trigger: ATGGTGGCGATGACCTGAGCAGAGACGAGTGTGTGG...GCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp CTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGTGGAGGCGCAAGGGTaGAGGGTGCACTGGAATGAG +
Preference number: 4 (lower is better)
Translates to: LPPLIPPFTLGQLETESGVEAQG*RVHWNE
Trigger: CTCATTCCAGTGCACCCTGCACCCTTGCGCCTCCAC...CCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp TTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGGGATGGTCACCTTCTTaGAGGAGCGCCCATCCTCCT +
Preference number: 4 (lower is better)
Translates to: FNTPIHIGPAGNRKWGWQGWSPS*RSAHPP
Trigger: AGGAGGATGGGCGCTCCTGCAAGAAGGTGACCATCC...CTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp TACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTGTCCTGCATTCATTCTTaGGGATGGTCATGCGGATGG +
Preference number: 4 (lower is better)
Translates to: YPHSHWASWKQKVGLAEVSCIHS*GWSCGW
Trigger: CCATCCGCATGACCATCCGCAAGAATGAATGCAGGA...CACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp ATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTGGTTCACAGGGGTGCTaGTCCTGCATTCATTCTTGC +
Preference number: 4 (lower is better)
Translates to: IPPFTLGQLETESGAGRGGSQGC*SCIHSC
Trigger: GCAAGAATGAATGCAGGAGCAGCACCCCTGTGAACC...ACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp CCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCCCTCACGGCAGCACTTaGAGAATCGGGCATAGGTGT +
Preference number: 4 (lower is better)
Translates to: PLIPPFTLGQLETESGAGPHGST*RIGHRC
Trigger: ACACCTATGCCCGATTCTGCAAGTGCTGCCGTGAGG...GCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp TTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTCTCTCACCGAGGCGCTaGACCCGCAGGGACTCGGCT +
Preference number: 4 (lower is better)
Translates to: FLPPLIPPFTLGQLETESLSPRR*TRRDSA
Trigger: AGCCGAGTCCCTGCGGGTGCAGCGCCTCGGTGAGAG...ACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp TTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGGCCTGCTGGGAAGGTTaGCTTGGGGTAAGGGTACAG +
Preference number: 4 (lower is better)
Translates to: FNTPIHIGPAGNRKWGWQACWEG*LGVRVQ
Trigger: CTGTACCCTTACCCCAAGGCAACCTTCCCAGCAGGC...CTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp CTTATGTTCATGCCCTTCGGTTCCACGTGGCACAAAGTGGCACAGGGGGTGGGATGCAAAGCCTGGAGCTaGATTTGCAGGCTGAAGGTA +
Preference number: 4 (lower is better)
Translates to: LMFMPFGSTWHKVAQGVGCKAWS*ICRLKV
Trigger: TACCTTCAGCCTGCAAATGCAGCTCCAGGCTTTGCA...TCCCACCCCCTGTGCCACTTTGTGCCACGTGGAACCGAAGGGCATGAACATAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp TACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTGATCCAGGAAGCTCTCTaGACTAGGATTTCCGGAGTC +
Preference number: 4 (lower is better)
Translates to: YPHSHWASWKQKVGLAEVIQEAL*TRISGV
Trigger: GACTCCGGAAATCCTAGTCCAGAGAGCTTCCTGGAT...CACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp ATGTTCATGCCCTTCGGTTCCACGTGGCACAAAGTGGCACAGGGGGTGGGAGACACATCAACCACAGGGTaGCAGATCTCAAACACCTCA +
Preference number: 4 (lower is better)
Translates to: MFMPFGSTWHKVAQGVGDTSTTG*QISNTS
Trigger: TGAGGTGTTTGAGATCTGCCACCCTGTGGTTGATGT...GTCTCCCACCCCCTGTGCCACTTTGTGCCACGTGGAACCGAAGGGCATGAACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp CAGATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAGGGTCCCGGCAGGTTTaGAAGCAGGGGCTGGCACAG +
Preference number: 4 (lower is better)
Translates to: QISTTFNTPIHIGPAGNRGSRQV*KQGLAQ
Trigger: CTGTGCCAGCCCCTGCTTCCAAACCTGCCGGGACCC...TCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAATCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp CCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCGGGAACCCAAACTGCTaGCTCCACACAGTCCTCCAA +
Preference number: 4 (lower is better)
Translates to: PLIPPFTLGQLETESGAGGNPNC*LHTVLQ
Trigger: TTGGAGGACTGTGTGGAGCCAGCAGTTTGGGTTCCC...GCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp TTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGTGGGCAACCCTTGACTaGGAGGGAGGGTCTCATTGC +
Preference number: 4 (lower is better)
Translates to: FNTPIHIGPAGNRKWGWQWATLD*EGGSHC
Trigger: GCAATGAGACCCTCCCTCCCAGTCAAGGGTTGCCCA...CTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp CCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGTGGCTCCTCATCACTaGGAGTGGGCAACCCTTGAC +
Preference number: 4 (lower is better)
Translates to: PPLIPPFTLGQLETESGAVAPHH*EWATLD
Trigger: GTCAAGGGTTGCCCACTCCCAGTGATGAGGAGCCAC...AGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp CTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGTGTGGGTGGGGGTCCTaGGGCTTTCCTGTGACAGCT +
Preference number: 4 (lower is better)
Translates to: LPPLIPPFTLGQLETESGCGWGS*GFPVTA
Trigger: AGCTGTCACAGGAAAGCCCCAGGACCCCCACCCACA...CCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp CCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTCCACTGGCTCCTCAGTaGCTGTCACTGGTGGGTTCA +
Preference number: 4 (lower is better)
Translates to: PPLIPPFTLGQLETESGAPLAPQ*LSLVGS
Trigger: TGAACCCACCAGTGACAGCCACTGAGGAGCCAGTGG...AGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp CTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCCTGGAGACACCACTaGCTCCTCAGTGGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: LPPLIPPFTLGQLETESGAWRHH*LLSGCH
Trigger: GTGACAGCCACTGAGGAGCCAGTGGTGTCTCCAGGC...CCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp ACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCGGGAAGCCACAGGTCTaGAGGAGGGACTTGCTGTCA +
Preference number: 4 (lower is better)
Translates to: TTFNTPIHIGPAGNRKWGGKPQV*RRDLLS
Trigger: TGACAGCAAGTCCCTCCTCCAGACCTGTGGCTTCCC...GCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp CCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGGAAGCCACAGGTCTaGAGGAGGGACTTGCTGTCA +
Preference number: 4 (lower is better)
Translates to: PPLIPPFTLGQLETESGAGKPQV*RRDLLS
Trigger: TGACAGCAAGTCCCTCCTCCAGACCTGTGGCTTCCC...AGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp TTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTTGGGCCTGGGTGGGCTaGGGGACCCCTGTCCTGCTT +
Preference number: 4 (lower is better)
Translates to: FLPPLIPPFTLGQLETESWAWVG*GTPVLL
Trigger: AAGCAGGACAGGGGTCCCCCAGCCCACCCAGGCCCA...ACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp ACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCAGGCCAGAGAGGAGCTaGGAGGGACGAGTTGACTCA +
Preference number: 4 (lower is better)
Translates to: TTFNTPIHIGPAGNRKWGRPERS*EGRVDS
Trigger: TGAGTCAACTCGTCCCTCCCAGCTCCTCTCTGGCCT...GCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp CCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTCAGAGTCGTGGCCTGTaGCTGGAGTGGAGTGGTGAT +
Preference number: 4 (lower is better)
Translates to: PPLIPPFTLGQLETESGAQSRGL*LEWSGD
Trigger: ATCACCACTCCACTCCAGCCACAGGCCACGACTCTG...AGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp TTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGCAGAGTCGTGGCCTGTaGCTGGAGTGGAGTGGTGAT +
Preference number: 4 (lower is better)
Translates to: FNTPIHIGPAGNRKWGWQQSRGL*LEWSGD
Trigger: ATCACCACTCCACTCCAGCCACAGGCCACGACTCTG...CTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp TTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGATGCTATGTGAGTGGGTaGGTGCGCCTGGGTCATTGC +
Preference number: 4 (lower is better)
Translates to: LIPPFTLGQLETESGAGRCYVSG*VRLGHC
Trigger: GCAATGACCCAGGCGCACCCACCCACTCACATAGCA...TCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp TCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGGGTGCTATGTGAGTaGGTGGGTGCGCCTGGGTCA +
Preference number: 4 (lower is better)
Translates to: STTFNTPIHIGPAGNRKWGVLCE*VGAPGS
Trigger: TGACCCAGGCGCACCCACCCACTCACATAGCACCCC...CCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp TTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGATTCACGCGAATCAGCTaGCCCTCCAGGCAGATGTGG +
Preference number: 4 (lower is better)
Translates to: LIPPFTLGQLETESGAGRFTRIS*PSRQMW
Trigger: CCACATCTGCCTGGAGGGCCAGCTGATTCGCGTGAA...TCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp CAACCTTATGTTCATGCCCTTCGGTTCCACGTGGCACAAAGTGGCACAGGGGGTTTGAACAGAGCTACGTaGCTCCCATCGAAGGTCACG +
Preference number: 4 (lower is better)
Translates to: QPYVHALRFHVAQSGTGGLNRAT*LPSKVT
Trigger: CGTGACCTTCGATGGGAGCCACGTAGCTCTGTTCAA...ACCCCCTGTGCCACTTTGTGCCACGTGGAACCGAAGGGCATGAACATAAGGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp CCAGGCACCTTTCTTTGGACTACAGGAGATGCGAAGGTCACTGAGCTCACTCTGGAGCTGTGGAGCCACTaGATCTGGATGTCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: PGTFLWTTGDAKVTELTLELWSH*IWMSEG
Trigger: TCCCTCAGACATCCAGATCCAGTGGCTCCACAGCTC...CAGAGTGAGCTCAGTGACCTTCGCATCTCCTGTAGTCCAAAGAAAGGTGCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp TCCATGCTCAACACGTGCCAGATTTCTACCACCTTTAATACCCCCATTCACATTGGGCGGAAGCGGGTCTaGCCCACTGAGGTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: SMLNTCQISTTFNTPIHIGRKRV*PTEVRE
Trigger: CTCCCTGACCTCAGTGGGCCAGACCCGCTTCCGCCC...AATGTGAATGGGGGTATTAAAGGTGGTAGAAATCTGGCACGTGTTGAGCATGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp AGATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAATGTGGCGCAGCTGTCTaGGCGGAAGCGGGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: RFLPPLIPPFTLGQLETECGAAV*AEAGLA
Trigger: GGCCAGACCCGCTTCCGCCCAGACAGCTGCGCCACA...TTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp AGCTGTGGTTCCCATGTAAGCACCATGCACCTTCCCATCTTCCCACAGCTCTCACACATGCCTGGTATGTaGAGTCGCTGGAGCACAGGA +
Preference number: 4 (lower is better)
Translates to: SCGSHVSTMHLPIFPQLSHMPGM*SRWSTG
Trigger: TCCTGTGCTCCAGCGACTCCACATACCAGGCATGTG...TGAGAGCTGTGGGAAGATGGGAAGGTGCATGGTGCTTACATGGGAACCACAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp CCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCGCTGTCACACATGCCTaGTATGTGGAGTCGCTGGAG +
Preference number: 4 (lower is better)
Translates to: PLIPPFTLGQLETESGAGAVTHA*YVESLE
Trigger: CTCCAGCGACTCCACATACCAGGCATGTGTGACAGC...GCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp CCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCCTGGCATGTCTTGGGTaGCTCACAGGCTGTCACACA +
Preference number: 4 (lower is better)
Translates to: PLIPPFTLGQLETESGAGLACLG*LTGCHT
Trigger: TGTGTGACAGCCTGTGAGCCACCCAAGACATGCCAG...GCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp ATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTCTTGACATTCGGGGATaGAGTCTGGACAGTCACCAC +
Preference number: 4 (lower is better)
Translates to: IPPFTLGQLETESGAGRGLDIRG*SLDSHH
Trigger: GTGGTGACTGTCCAGACTCCATCCCCGAATGTCAAG...ACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp AATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGGGAGAACAAGTAGGATaGTGCACACTTGGCCCGATG +
Preference number: 4 (lower is better)
Translates to: NTPIHIGPAGNRKWGWQRGEQVG*CTLGPM
Trigger: CATCGGGCCAAGTGTGCACCATCCTACTTGTTCTCC...CCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp CCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCACCTCCTTGGCCAGATaGATCTCCTGCTCACCCACA +
Preference number: 4 (lower is better)
Translates to: PLIPPFTLGQLETESGAGTSLAR*ISCSPT
Trigger: TGTGGGTGAGCAGGAGATCCATCTGGCCAAGGAGGT...GCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp AATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGATGACATGTGGCAGTTaGACCCTCATGCCTCCATGG +
Preference number: 4 (lower is better)
Translates to: NTPIHIGPAGNRKWGWQRMTCGS*TLMPPW
Trigger: CCATGGAGGCATGAGGGTCCAACTGCCACATGTCAT...CCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp AGCTGTGGTTCCCATGTAAGCACCATGCACCTTCCCATCTTCCCACAGCTCTCACACCACAGAGCCAGGTaGGTACAGAGTCCCGTGAAA +
Preference number: 4 (lower is better)
Translates to: SCGSHVSTMHLPIFPQLSHHRAR*VQSPVK
Trigger: TTTCACGGGACTCTGTACCCACCTGGCTCTGTGGTG...TGAGAGCTGTGGGAAGATGGGAAGGTGCATGGTGCTTACATGGGAACCACAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp ATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGGGGCTGGCCAGGTCCTaGCAGGTACGTCCACACGGG +
Preference number: 4 (lower is better)
Translates to: ISTTFNTPIHIGPAGNRKGLARS*QVRPHG
Trigger: CCCGTGTGGACGTACCTGCCAGGACCTGGCCAGCCC...CTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp TCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGCAGTGCAGGCGCACTTaGCCTCCGGGATGCAGAGTG +
Preference number: 4 (lower is better)
Translates to: STTFNTPIHIGPAGNRKWQCRRT*PPGCRV
Trigger: CACTCTGCATCCCGGAGGCCAAGTGCGCCTGCACTG...CCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp CCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGATCCACCGGGACAATaGTGTCTGGGGCTTGGCACT +
Preference number: 4 (lower is better)
Translates to: PPLIPPFTLGQLETESGADPPGQ*CLGLGT
Trigger: AGTGCCAAGCCCCAGACACCATTGTCCCGGTGGATC...AGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp CCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCGGATGGTCATGCGGATaGTCACCTTCTTGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: PLIPPFTLGQLETESGAGGWSCG*SPSCRS
Trigger: GCTCCTGCAAGAAGGTGACCATCCGCATGACCATCC...GCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp AATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTGTAGTTGTAGATGCTaGCGGATGGGCACCTCCCAT +
Preference number: 4 (lower is better)
Translates to: NTPIHIGPAGNRKWGWQRCSCRC*RMGTSH
Trigger: ATGGGAGGTGCCCATCCGCCAGCATCTACAACTACA...CCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp TTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGCACCCAGGTGGCATTaGTGGCACAGAAGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: LIPPFTLGQLETESGAGRAPRWH*WHRRAA
Trigger: TGCAGCTCTTCTGTGCCACCAATGCCACCTGGGTGC...TCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp CTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGGCAGGCACAGTCGGTaGGCTCCTGCACTGTATAGG +
Preference number: 4 (lower is better)
Translates to: LPPLIPPFTLGQLETESGGRHSR*APALYR
Trigger: CCTATACAGTGCAGGAGCCCACCGACTGTGCCTGCC...CCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp TTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGACCCATGTGCGGAAAATaGGGAGCCCAGAAAGGGAGC +
Preference number: 4 (lower is better)
Translates to: LIPPFTLGQLETESGAGRPMCGK*GAQKGS
Trigger: GCTCCCTTTCTGGGCTCCCCATTTTCCGCACATGGG...TCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp AGGCTGCTGCCCCTGGACCTAAAGCCCATTTTCCATCTCAAACCAGGGACAGAGCTGGGAAGGTTGCCTTaGGGTAAGGGTACAGGCTTA +
Preference number: 4 (lower is better)
Translates to: RLLPLDLKPIFHLKPGTELGRLP*GKGTGL
Trigger: TAAGCCTGTACCCTTACCCCAAGGCAACCTTCCCAG...CTCTGTCCCTGGTTTGAGATGGAAAATGGGCTTTAGGTCCAGGGGCAGCAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp GGACGCTCTGGTTCAGTGACAAGGATCTCACAAGTGCTCAGGGAGGCTGGGGCTACTCTGTCATGGCCTTaGAGAAAAGGCACACTGCAA +
Preference number: 4 (lower is better)
Translates to: GRSGSVTRISQVLREAGATLSWP*RKGTLQ
Trigger: TTGCAGTGTGCCTTTTCTCCAAGGCCATGACAGAGT...AGCCCCAGCCTCCCTGAGCACTTGTGAGATCCTTGTCACTGAACCAGAGCGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR TCA 90 bp CAGATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAATGCATCCCCGTGTCTaGGCAGACCCTGGGGACAGG +
Preference number: 4 (lower is better)
Translates to: QISTTFNTPIHIGPAGNRMHPRV*ADPGDR
Trigger: CCTGTCCCCAGGGTCTGCTCAGACACGGGGATGCAT...TCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAATCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp AATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGGGAAATGCACCAGTGTaGAAAATCCCACTCGCCATG +
Preference number: 4 (lower is better)
Translates to: NTPIHIGPAGNRKWGWQRGNAPV*KIPLAM
Trigger: CATGGCGAGTGGGATTTTTCACACTGGTGCATTTCC...CCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp ATGTTCATGCCCTTCGGTTCCACGTGGCACAAAGTGGCACAGGGGGTGGGAGACGTCTGTCAGGCAGTTTaGGTAAAACCAAGTGACATC +
Preference number: 4 (lower is better)
Translates to: MFMPFGSTWHKVAQGVGDVCQAV*VKPSDI
Trigger: GATGTCACTTGGTTTTACTCAAACTGCCTGACAGAC...GTCTCCCACCCCCTGTGCCACTTTGTGCCACGTGGAACCGAAGGGCATGAACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR TCA 90 bp CAGATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGATCACAGCCTTGGTCATaGGCGGGAAGCGAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: QISTTFNTPIHIGPAGNRSQPWS*AGSEGQ
Trigger: CTGCCCCTCGCTTCCCGCTCATGACCAAGGCTGTGA...TCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAATCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp ACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGTTGCAAGGGGACTaGCAGGAACCTGTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: TTFNTPIHIGPAGNRKWGWLQGD*QEPVLL
Trigger: CAGCAGAACAGGTTCCTGTCAGTCCCCTTGCAACCA...GCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp CTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGCTGGGAGGGACGAGTTaGCTCAAGGGACATGAAGGG +
Preference number: 4 (lower is better)
Translates to: LPPLIPPFTLGQLETESGLGGTS*LKGHEG
Trigger: CCCTTCATGTCCCTTGAGTCAACTCGTCCCTCCCAG...CCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp TCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGCAGGTCAGGGAAGATTaGGCACCGGCAGGCACACTC +
Preference number: 4 (lower is better)
Translates to: STTFNTPIHIGPAGNRKWQVRED*APAGTL
Trigger: GAGTGTGCCTGCCGGTGCTCAATCTTCCCTGACCTG...CCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp AATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGCTGTGTCCTCAATTCTaGATCCATACCTGCTCACCG +
Preference number: 4 (lower is better)
Translates to: NTPIHIGPAGNRKWGWQRLCPQF*IHTCSP
Trigger: CGGTGAGCAGGTATGGATTCAGAATTGAGGACACAG...CCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp CCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTCACGATCATGAGTCCTaGGCTGTGGAGCCACTGGAT +
Preference number: 4 (lower is better)
Translates to: PPLIPPFTLGQLETESGAHDHES*AVEPLD
Trigger: ATCCAGTGGCTCCACAGCTCAGGACTCATGATCGTG...AGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp CTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGACTGATGCCGCACGATaGCATAGCCGGCAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: LPPLIPPFTLGQLETESGTDAAR*HSRQAA
Trigger: AGCAGCTTGCCGGCTATGTCATCGTGCGGCATCAGT...CCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp TTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGCTCTGGACTCATCTTaGTGTAGACAGCCGAGGCAC +
Preference number: 4 (lower is better)
Translates to: LIPPFTLGQLETESGAGRALDSS*CRQPRH
Trigger: GTGCCTCGGCTGTCTACATCAAGATGAGTCCAGAGC...TCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp ACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCGCTCTGGACTCATCTTaGTGTAGACAGCCGAGGCAC +
Preference number: 4 (lower is better)
Translates to: TTFNTPIHIGPAGNRKWGALDSS*CRQPRH
Trigger: GTGCCTCGGCTGTCTACATCAAGATGAGTCCAGAGC...GCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp AAAGGCCAAGAGAATGGGCCACTGCATCCTGCCCCTGTGCTTGGTCTTGGGTCCTCAAAGGTTGTGAAGTaGATGTCACCAGTCACTGAG +
Preference number: 4 (lower is better)
Translates to: KGQENGPLHPAPVLGLGSSKVVK*MSPVTE
Trigger: CTCAGTGACTGGTGACATTCACTTCACAACCTTTGA...GGACCCAAGACCAAGCACAGGGGCAGGATGCAGTGGCCCATTCTCTTGGCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR TCA 90 bp ATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGGCTGGCAGCAGCCGCTaGGGGAGCTGTTCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: ISTTFNTPIHIGPAGNRKAGSSR*GSCSRS
Trigger: AGACCTGGAACAGCTCCCTCAGCGGCTGCTGCCAGC...CTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp TTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGCACACTCAGTCTCATTaGGCGGTGGGCAGCTTATGG +
Preference number: 4 (lower is better)
Translates to: FNTPIHIGPAGNRKWGWQHTQSH*AVGSLW
Trigger: CCATAAGCTGCCCACCGCTCAATGAGACTGAGTGTG...CTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp TTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTAGCCCCCGACCTCCCTaGGTCCACAACCCTCTCACC +
Preference number: 4 (lower is better)
Translates to: FLPPLIPPFTLGQLETESSPRPP*VHNPLT
Trigger: GGTGAGAGGGTTGTGGACTCAGGGAGGTCGGGGGCT...ACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp ACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGTGGGAACCCAAACTaGTGGCTCCACACAGTCCTC +
Preference number: 4 (lower is better)
Translates to: TTFNTPIHIGPAGNRKWGCGNPN*WLHTVL
Trigger: GAGGACTGTGTGGAGCCAGCAGTTTGGGTTCCCACA...GCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp CCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTCGCCTGGGTCATTGCTaGTGGAGTGAAAGGCAGTAC +
Preference number: 4 (lower is better)
Translates to: PPLIPPFTLGQLETESGARLGHC*WSERQY
Trigger: GTACTGCCTTTCACTCCAGCAGCAATGACCCAGGCG...AGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp TTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGACCACCTTCCCTGTGGTaGTCTTTCGTGGGACAACAG +
Preference number: 4 (lower is better)
Translates to: LIPPFTLGQLETESGAGRPPSLW*SFVGQQ
Trigger: CTGTTGTCCCACGAAAGAGCACCACAGGGAAGGTGG...TCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp CCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCTGTGGGCCCACCCTCTaGAGAACCATACATGGAAGT +
Preference number: 4 (lower is better)
Translates to: PLIPPFTLGQLETESGAGCGPTL*RTIHGS
Trigger: ACTTCCATGTATGGTTCTGCAGAGGGTGGGCCCACA...GCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp TTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTTGCCAGGTGAGGCCCTaGCGAGGTTCCATGGGCCTC +
Preference number: 4 (lower is better)
Translates to: FLPPLIPPFTLGQLETESCQVRP*RGSMGL
Trigger: GAGGCCCATGGAACCTCGGCAGGGCCTCACCTGGCA...ACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp CCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCCCAGGTTGGCACTTTTaGAGTCCAGTACATGGACGG +
Preference number: 4 (lower is better)
Translates to: PLIPPFTLGQLETESGAGPGWHF*SPVHGR
Trigger: CCGTCCATGTACTGGACTGCAAAAGTGCCAACCTGG...GCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp CCAACAGACACTCTCTTGCTAAACAGTCCCATGGAGCACAGAGACTGGCACTGGACAGGCTGTCACACATaGCTGGTATGTGGAGTCGCT +
Preference number: 4 (lower is better)
Translates to: PTDTLLLNSPMEHRDWHWTGCHT*LVCGVA
Trigger: AGCGACTCCACATACCAGGCATGTGTGACAGCCTGT...CCAGTGCCAGTCTCTGTGCTCCATGGGACTGTTTAGCAAGAGAGTGTCTGTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp CTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGTCCGTGGTATTCCTGTaGACAGTGAGCGCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: LPPLIPPFTLGQLETESGSVVFL*TVSASP
Trigger: AGGGGAGGCGCTCACTGTGCACAGGAATACCACGGA...CCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp GGCCCTAGAATCCACCATCTTTGTCTTTGGGAACTCCTTCTGGGCAGCCATCTGGAACAAGTAGGATGGTaGACACTTGGCCCGATGGAG +
Preference number: 4 (lower is better)
Translates to: GPRIHHLCLWELLLGSHLEQVGW*TLGPME
Trigger: CTCCATCGGGCCAAGTGTGCACCATCCTACTTGTTC...CAGATGGCTGCCCAGAAGGAGTTCCCAAAGACAAAGATGGTGGATTCTAGGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp CCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCGAACAAGTAGGATGGTaGACACTTGGCCCGATGGAG +
Preference number: 4 (lower is better)
Translates to: PLIPPFTLGQLETESGAGEQVGW*TLGPME
Trigger: CTCCATCGGGCCAAGTGTGCACCATCCTACTTGTTC...GCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp TTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGATGCTGCACTCCCACTTaGCTGAGGTGCATGTGCAAG +
Preference number: 4 (lower is better)
Translates to: LIPPFTLGQLETESGAGRCCTPT*LRCMCK
Trigger: CTTGCACATGCACCTCAGGCAAGTGGGAGTGCAGCA...TCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp CCAGGCACCTTTCTTTGGACTACAGGAGATGCGAAGGTCACTGAGCTCACTCTGCCACATGGGGCATTCTaGAATGTCACGGTGAAGGTG +
Preference number: 4 (lower is better)
Translates to: PGTFLWTTGDAKVTELTLPHGAF*NVTVKV
Trigger: CACCTTCACCGTGACATTGCAGAATGCCCCATGTGG...CAGAGTGAGCTCAGTGACCTTCGCATCTCCTGTAGTCCAAAGAAAGGTGCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp AACCTTATGTTCATGCCCTTCGGTTCCACGTGGCACAAAGTGGCACAGGGGGTGACATTCTCCACGCTGTaGATGAACTCCTCATCCAGC +
Preference number: 4 (lower is better)
Translates to: NLMFMPFGSTWHKVAQGVTFSTL*MNSSSS
Trigger: GCTGGATGAGGAGTTCATGCACAGCGTGGAGAATGT...CACCCCCTGTGCCACTTTGTGCCACGTGGAACCGAAGGGCATGAACATAAGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp TTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGCAGGGGTGCTGCTCCTaGATTCATTCTTGCGGATGG +
Preference number: 4 (lower is better)
Translates to: FNTPIHIGPAGNRKWGWQQGCCS*IHSCGW
Trigger: CCATCCGCAAGAATGAATGCAGGAGCAGCACCCCTG...CTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp ATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTCTAGGTTCACAGGGGTaGTGCTCCTGCATTCATTCT +
Preference number: 4 (lower is better)
Translates to: IPPFTLGQLETESGAGRGLGSQG*CSCIHS
Trigger: AGAATGAATGCAGGAGCAGCACCCCTGTGAACCTAG...ACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp TTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTTGTCTGAGCAGACCCTaGGGACAGGCGCAGCCCGAG +
Preference number: 4 (lower is better)
Translates to: FLPPLIPPFTLGQLETESCLSRP*GQAQPE
Trigger: CTCGGGCTGCGCCTGTCCCCAGGGTCTGCTCAGACA...ACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp CCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCTGCACTGTGGTTCTCTaGTCCCACAAGAGGGTGATG +
Preference number: 4 (lower is better)
Translates to: PLIPPFTLGQLETESGAGCTVVL*SHKRVM
Trigger: CATCACCCTCTTGTGGGACCAGAGAACCACAGTGCA...GCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp CTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGTGGCTCCTCATCACTaGGAGTGGGCAACCCTTGAC +
Preference number: 4 (lower is better)
Translates to: LPPLIPPFTLGQLETESGVAPHH*EWATLD
Trigger: GTCAAGGGTTGCCCACTCCCAGTGATGAGGAGCCAC...CCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp ATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGGCAGGGTGGTCTGGGTaGGGCCTGGAGACACCACTG +
Preference number: 4 (lower is better)
Translates to: ISTTFNTPIHIGPAGNRKAGWSG*GLETPL
Trigger: CAGTGGTGTCTCCAGGCCCCACCCAGACCACCCTGC...CTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp TTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGCCCTTGTTGTCTCCATaGCACCTGACACCATGCCAG +
Preference number: 4 (lower is better)
Translates to: FNTPIHIGPAGNRKWGWQPLLSP*HLTPCQ
Trigger: CTGGCATGGTGTCAGGTGCCATGGAGACAACAAGGG...CTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp CAACCTTATGTTCATGCCCTTCGGTTCCACGTGGCACAAAGTGGCACAGGGGGTCTTCGCCCTTCTCTGTaGATAGCACTATCTCCAAGC +
Preference number: 4 (lower is better)
Translates to: QPYVHALRFHVAQSGTGGLRPSL*IALSPS
Trigger: GCTTGGAGATAGTGCTATCCACAGAGAAGGGCGAAG...ACCCCCTGTGCCACTTTGTGCCACGTGGAACCGAAGGGCATGAACATAAGGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp ATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGGCCATGGTGGTATGCTaGGCTGGGCGGGGTGGTGCA +
Preference number: 4 (lower is better)
Translates to: ISTTFNTPIHIGPAGNRKAMVVC*AGRGGA
Trigger: TGCACCACCCCGCCCAGCCCAGCATACCACCATGGC...CTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp TCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGAGCTGGAGACCTGGTaGCCATGGTGGTATGCTGGG +
Preference number: 4 (lower is better)
Translates to: STTFNTPIHIGPAGNRKWELETW*PWWYAG
Trigger: CCCAGCATACCACCATGGCCACCAGGTCTCCAGCTC...CCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp CTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCAGAGCTGGAGACCTaGTGGCCATGGTGGTATGCT +
Preference number: 4 (lower is better)
Translates to: LPPLIPPFTLGQLETESGAELET*WPWWYA
Trigger: AGCATACCACCATGGCCACCAGGTCTCCAGCTCTGC...CCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp CAGATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGACTGCCAGCCCATCAGTaGCTGTTGACAGGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: QISTTFNTPIHIGPAGNRLPAHQ*LLTGWR
Trigger: CCGCCAGCCTGTCAACAGCCACTGATGGGCTGGCAG...TCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAATCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp TTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGCCGGGTGTGGCCACTaGGGCAGATGTGCCCACCTT +
Preference number: 4 (lower is better)
Translates to: FLPPLIPPFTLGQLETESAGCGH*GRCAHL
Trigger: AAGGTGGGCACATCTGCCCCAGTGGCCACACCCGGC...ACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp AGATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAGCCGGGTGTGGCCACTaGGGCAGATGTGCCCACCTT +
Preference number: 4 (lower is better)
Translates to: RFLPPLIPPFTLGQLETEAGCGH*GRCAHL
Trigger: AAGGTGGGCACATCTGCCCCAGTGGCCACACCCGGC...TTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp AATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGAGTGAAAGGCAGTACTaGGCTAAGTGTCTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: NTPIHIGPAGNRKWGWQRSERQY*AKCLSR
Trigger: CCTGCTCAGACACTTAGCCCAGTACTGCCTTTCACT...CCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp ACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGTGGCCACCTTCCCTGTaGTGCTCTTTCGTGGGACAA +
Preference number: 4 (lower is better)
Translates to: TFNTPIHIGPAGNRKWGWWPPSL*CSFVGQ
Trigger: TTGTCCCACGAAAGAGCACCACAGGGAAGGTGGCCA...CCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp TTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGACTTGCTTGGATAGGATaGCCACCTTCCCTGTGGTGC +
Preference number: 4 (lower is better)
Translates to: LIPPFTLGQLETESGAGRLAWIG*PPSLWC
Trigger: GCACCACAGGGAAGGTGGCCATCCTATCCAAGCAAG...TCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp TACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTGCTGCAGAACCATACATaGAAGTGGGCAGAGACACTT +
Preference number: 4 (lower is better)
Translates to: YPHSHWASWKQKVGLAEVLQNHT*KWAETL
Trigger: AAGTGTCTCTGCCCACTTCCATGTATGGTTCTGCAG...CACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp AATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGCGATTGGAACACAGGTaGTGGATGTATTGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: NTPIHIGPAGNRKWGWQRRLEHR*WMYWPQ
Trigger: CTGAGGCCAATACATCCACCACCTGTGTTCCAATCG...CCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp AGATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAACCCTCCAGGCAGATGTaGCGGACGCAGTCCTGCTCG +
Preference number: 4 (lower is better)
Translates to: RFLPPLIPPFTLGQLETEPSRQM*RTQSCS
Trigger: CGAGCAGGACTGCGTCCGCCACATCTGCCTGGAGGG...TTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp AATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGGGTGAGCATTTCATCTaGGCTCTGGCTGAGGATGTA +
Preference number: 4 (lower is better)
Translates to: NTPIHIGPAGNRKWGWQRGEHFI*ALAEDV
Trigger: TACATCCTCAGCCAGAGCCCAGATGAAATGCTCACC...CCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp TTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGATGCAGAGTGCAGAGTaGCGCCGGTGTAAGATGGTG +
Preference number: 4 (lower is better)
Translates to: FNTPIHIGPAGNRKWGWQMQSAE*RRCKMV
Trigger: CACCATCTTACACCGGCGCCACTCTGCACTCTGCAT...CTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp CCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCGGAGAACAAGTAGGATaGTGCACACTTGGCCCGATG +
Preference number: 4 (lower is better)
Translates to: PLIPPFTLGQLETESGAGGEQVG*CTLGPM
Trigger: CATCGGGCCAAGTGTGCACCATCCTACTTGTTCTCC...GCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp TTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAACCTCCTTGGCCAGATaGATCTCCTGCTCACCCACA +
Preference number: 4 (lower is better)
Translates to: LIPPFTLGQLETESGAGRTSLAR*ISCSPT
Trigger: TGTGGGTGAGCAGGAGATCCATCTGGCCAAGGAGGT...TCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp CCAACAGACACTCTCTTGCTAAACAGTCCCATGGAGCACAGAGACTGGCACTGGTCAGCTTCCCAGAGCTaGTCACCAGATCATCCTTGG +
Preference number: 4 (lower is better)
Translates to: PTDTLLLNSPMEHRDWHWSASQS*SPDHPW
Trigger: CCAAGGATGATCTGGTGACCAGCTCTGGGAAGCTGA...CCAGTGCCAGTCTCTGTGCTCCATGGGACTGTTTAGCAAGAGAGTGTCTGTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp CCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCTCAGCTTCCCAGAGCTaGTCACCAGATCATCCTTGG +
Preference number: 4 (lower is better)
Translates to: PLIPPFTLGQLETESGAGSASQS*SPDHPW
Trigger: CCAAGGATGATCTGGTGACCAGCTCTGGGAAGCTGA...GCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp CCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGTGCCCGGCACCAGGTaGCTACATCACCCATTGATT +
Preference number: 4 (lower is better)
Translates to: PPLIPPFTLGQLETESGAVPGTR*LHHPLI
Trigger: AATCAATGGGTGATGTAGCCACCTGGTGCCGGGCAC...AGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp ACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCACCACAGAGCCAGGTaGGTACAGAGTCCCGTGAAA +
Preference number: 4 (lower is better)
Translates to: TFNTPIHIGPAGNRKWGWHHRAR*VQSPVK
Trigger: TTTCACGGGACTCTGTACCCACCTGGCTCTGTGGTG...CCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp AATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTTGGTTCAGGCCACATaGGGCATTCTGCAATGTCAC +
Preference number: 4 (lower is better)
Translates to: NTPIHIGPAGNRKWGWQRLVQAT*GILQCH
Trigger: GTGACATTGCAGAATGCCCCATGTGGCCTGAACCAA...CCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp AATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGATCACTGACACTGACTaGACACAGGCTCCATCTTGG +
Preference number: 4 (lower is better)
Translates to: NTPIHIGPAGNRKWGWQRITDTD*TQAPSW
Trigger: CCAAGATGGAGCCTGTGTCCAGTCAGTGTCAGTGAT...CCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp ACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGTCCTCCACCCATCGCTaGTCCACTTGCAGGTACAGT +
Preference number: 4 (lower is better)
Translates to: TFNTPIHIGPAGNRKWGWSSTHR*STCRYS
Trigger: ACTGTACCTGCAAGTGGACCAGCGATGGGTGGAGGA...CCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp TCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGTCCACTCCCTGGAAGTaGCAGGAGCACTGGTTCCGG +
Preference number: 4 (lower is better)
Translates to: STTFNTPIHIGPAGNRKWSTPWK*QEHWFR
Trigger: CCGGAACCAGTGCTCCTGCCACTTCCAGGGAGTGGA...CCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp TTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGATCTTTGCAGTGGCAGTaGCCCAGGGATGGGATGTCA +
Preference number: 4 (lower is better)
Translates to: LIPPFTLGQLETESGAGRSLQWQ*PRDGMS
Trigger: TGACATCCCATCCCTGGGCCACTGCCACTGCAAAGA...TCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp TTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGTGCAGGGTGCACTaGAATGAGCCCCGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: FLPPLIPPFTLGQLETESGCRVH*NEPRWH
Trigger: GTGCCAGCGGGGCTCATTCCAGTGCACCCTGCACCC...ACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp AGATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAATCTGGGGCTTGGCACTaGTGCTGGCAGCAGCCGCTG +
Preference number: 4 (lower is better)
Translates to: RFLPPLIPPFTLGQLETESGAWH*CWQQPL
Trigger: CAGCGGCTGCTGCCAGCACCAGTGCCAAGCCCCAGA...TTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp ACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGTGGTTCGCCTCACAGTaGATGTCACAGAGCACGGAG +
Preference number: 4 (lower is better)
Translates to: TFNTPIHIGPAGNRKWGWWFASQ*MSQSTE
Trigger: CTCCGTGCTCTGTGACATCCACTGTGAGGCGAACCA...CCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp TTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGTCTCATTGAGCGGTaGGCAGCTTATGGGAGAGCG +
Preference number: 4 (lower is better)
Translates to: FNTPIHIGPAGNRKWGWQSLIER*AAYGRA
Trigger: CGCTCTCCCATAAGCTGCCCACCGCTCAATGAGACT...CTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp CCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTAGTCTCATTGAGCGGTaGGCAGCTTATGGGAGAGCG +
Preference number: 4 (lower is better)
Translates to: PPLIPPFTLGQLETESGASLIER*AAYGRA
Trigger: CGCTCTCCCATAAGCTGCCCACCGCTCAATGAGACT...AGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp CTTATGTTCATGCCCTTCGGTTCCACGTGGCACAAAGTGGCACAGGGGGTGGGAATTCATTCTTGCGGATaGTCATGCGGATGGTCACCT +
Preference number: 4 (lower is better)
Translates to: LMFMPFGSTWHKVAQGVGIHSCG*SCGWSP
Trigger: AGGTGACCATCCGCATGACCATCCGCAAGAATGAAT...TCCCACCCCCTGTGCCACTTTGTGCCACGTGGAACCGAAGGGCATGAACATAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp TTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTAGGCCTCAGGACCACTaGCAGGCACAGTCGGTGGGC +
Preference number: 4 (lower is better)
Translates to: FLPPLIPPFTLGQLETESRPQDH*QAQSVG
Trigger: GCCCACCGACTGTGCCTGCCAGTGGTCCTGAGGCCT...ACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp ACTGTGTCTGGTTTCTTGTGTAGTCAAAAAGGCCAAGAGAATGGGCCACTGCATGCAAGGGTCGCCTCCTaGTGGCTGCTGCTGGAGGAA +
Preference number: 4 (lower is better)
Translates to: TVSGFLCSQKGQENGPLHARVAS*WLLLEE
Trigger: TTCCTCCAGCAGCAGCCACCAGGAGGCGACCCTTGC...ATGCAGTGGCCCATTCTCTTGGCCTTTTTGACTACACAAGAAACCAGACACAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp CAACCTTATGTTCATGCCCTTCGGTTCCACGTGGCACAAAGTGGCACAGGGGGTCCAGGCACCTTTCTTTaGACTACAGGAGATGCGAAG +
Preference number: 4 (lower is better)
Translates to: QPYVHALRFHVAQSGTGGPGTFL*TTGDAK
Trigger: CTTCGCATCTCCTGTAGTCCAAAGAAAGGTGCCTGG...ACCCCCTGTGCCACTTTGTGCCACGTGGAACCGAAGGGCATGAACATAAGGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp TCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGCCCTTCGGTTCCACGTaGCACAAAGTGGCACAGGGG +
Preference number: 4 (lower is better)
Translates to: STTFNTPIHIGPAGNRKWPFGST*HKVAQG
Trigger: CCCCTGTGCCACTTTGTGCCACGTGGAACCGAAGGG...CCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR TCA 90 bp ATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTTTGAGTAAAACCAAGTaGCATCAACCACAGGGTGGC +
Preference number: 4 (lower is better)
Translates to: IPPFTLGQLETESGAGRGLSKTK*HQPQGG
Trigger: GCCACCCTGTGGTTGATGTCACTTGGTTTTACTCAA...ACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp TTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGACACATCTCTGTGTaGCTTCATCCAGGACCTGGG +
Preference number: 4 (lower is better)
Translates to: FNTPIHIGPAGNRKWGWQRHISV*LHPGPG
Trigger: CCCAGGTCCTGGATGAAGTCACACAGAGATGTGTCT...CTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp TTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGAGTGGGCAACCCTTaGCTGGGAGGGAGGGTCTCA +
Preference number: 4 (lower is better)
Translates to: FLPPLIPPFTLGQLETESGVGNP*LGGRVS
Trigger: TGAGACCCTCCCTCCCAGTCAAGGGTTGCCCACTCC...ACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp TTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTTCACAGCCTTGGTCATaGGCGGGAAGCGAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: FLPPLIPPFTLGQLETESSQPWS*AGSEGQ
Trigger: CTGCCCCTCGCTTCCCGCTCATGACCAAGGCTGTGA...ACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp CAGATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGATGGCCTCCACGATCATaGGTCCTGAGCTGTGGAGCC +
Preference number: 4 (lower is better)
Translates to: QISTTFNTPIHIGPAGNRWPPRS*VLSCGA
Trigger: GGCTCCACAGCTCAGGACTCATGATCGTGGAGGCCA...TCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAATCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp TCCATGCTCAACACGTGCCAGATTTCTACCACCTTTAATACCCCCATTCACATTAGCGGTGGCAGGCACTaGAGGTGCGGTTGGACACCA +
Preference number: 4 (lower is better)
Translates to: SMLNTCQISTTFNTPIHISGGRH*RCGWTP
Trigger: TGGTGTCCAACCGCACCTTCAGTGCCTGCCACCGCT...AATGTGAATGGGGGTATTAAAGGTGGTAGAAATCTGGCACGTGTTGAGCATGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR TCA 90 bp TCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGCCACAGCTCACAGAATaGCTCCGGAGGCACAAAGCG +
Preference number: 4 (lower is better)
Translates to: STTFNTPIHIGPAGNRKWPQLTE*LRRHKA
Trigger: CGCTTTGTGCCTCCGGAGTCATTCTGTGAGCTGTGG...CCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp TCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGTTGGCCAGGATGTACTaGCATGTGGCGGGGAACGTG +
Preference number: 4 (lower is better)
Translates to: STTFNTPIHIGPAGNRKWLARMY*HVAGNV
Trigger: CACGTTCCCCGCCACATGTCAGTACATCCTGGCCAA...CCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp ATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGCCTGCGTGTTGCCATTaGAGGTGCCGCAGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: ISTTFNTPIHIGPAGNRKPACCH*RCRRGP
Trigger: TGGGCCTCTGCGGCACCTTCAATGGCAACACGCAGG...CTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp TCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGTCTGGTAGAAGTTGGTaGGAGGGTCGAGCACGGTGG +
Preference number: 4 (lower is better)
Translates to: STTFNTPIHIGPAGNRKWSGRSW*EGRARW
Trigger: CCACCGTGCTCGACCCTCTCACCAACTTCTACCAGA...CCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp CTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGCTCTGGCAGGAAACATaGATCCCCGTGTCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: LPPLIPPFTLGQLETESGLWQET*IPVSEQ
Trigger: CTGCTCAGACACGGGGATGCATGTTTCCTGCCAGAG...CCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp CCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTCATGTGTGGACCTCCTaGTTGTCATCCAGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: PPLIPPFTLGQLETESGAHVWTS*LSSRKL
Trigger: GAGCTTCCTGGATGACAAGCAGGAGGTCCACACATG...AGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp CAACCTTATGTTCATGCCCTTCGGTTCCACGTGGCACAAAGTGGCACAGGGGGTTGCTCCTGTGGGAAATaGACCAGTGTGAAAAATCCC +
Preference number: 4 (lower is better)
Translates to: QPYVHALRFHVAQSGTGGCSCGK*TSVKNP
Trigger: GGGATTTTTCACACTGGTGCATTTCCCACAGGAGCA...ACCCCCTGTGCCACTTTGTGCCACGTGGAACCGAAGGGCATGAACATAAGGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp TTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGCCACAGTTAGAGGGGTaGTGGGACTTGAAGCACTCT +
Preference number: 4 (lower is better)
Translates to: FNTPIHIGPAGNRKWGWQPQLEG*WDLKHS
Trigger: AGAGTGCTTCAAGTCCCAGCACCCCTCTAACTGTGG...CTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp TTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGCCTGCTGCTGGGGGTaGTATGTGAGTGGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: FLPPLIPPFTLGQLETESACCWG*YVSGWV
Trigger: CACCCACCCACTCACATAGCACCCCCAGCAGCAGGC...ACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp CAGATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGATGCGGTTGGACACCATaGGAAGGCAGGGCGAGCAGT +
Preference number: 4 (lower is better)
Translates to: QISTTFNTPIHIGPAGNRCGWTP*EGRASS
Trigger: ACTGCTCGCCCTGCCTTCGCATGGTGTCCAACCGCA...TCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAATCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp CTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGTCACAGAAGGCTGGGTaGACACACTCGCCTCCATTG +
Preference number: 4 (lower is better)
Translates to: LPPLIPPFTLGQLETESGSQKAG*THSPPL
Trigger: CAATGGAGGCGAGTGTGTGCACCCAGCCTTCTGTGA...CCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp CAGCCATCTGCAGGCCTGAGTGTTGCAGGTATAGCCCTCTTTCCTTTTACTGTGGCCAGATGGATCTCCTaGTCACCCACAAAGAAGAGG +
Preference number: 4 (lower is better)
Translates to: QPSAGLSVAGIALFPFTVARWIS*SPTKKR
Trigger: CCTCTTCTTTGTGGGTGAGCAGGAGATCCATCTGGC...CACAGTAAAAGGAAAGAGGGCTATACCTGCAACACTCAGGCCTGCAGATGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp CCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGCCAGATGGATCTCCTaGTCACCCACAAAGAAGAGG +
Preference number: 4 (lower is better)
Translates to: PPLIPPFTLGQLETESGAARWIS*SPTKKR
Trigger: CCTCTTCTTTGTGGGTGAGCAGGAGATCCATCTGGC...AGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp TCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGTGCTCGTACACGCCCTaGATGGTTCCTGGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: STTFNTPIHIGPAGNRKWCSYTP*MVPGFC
Trigger: GCAGAACCCAGGAACCATGCAGGGCGTGTACGAGCA...CCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp CAGATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAGCGGCAGGCATCCCTaGGGCACTGCTCAAAGTAGG +
Preference number: 4 (lower is better)
Translates to: QISTTFNTPIHIGPAGNRSGRHP*GTAQSR
Trigger: CCTACTTTGAGCAGTGCCGCAGGGATGCCTGCCGCT...TCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAATCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp ACAGGCTTAGGTCTTCCAAATCCTTTCCTGAATTACCATATCAATACCAGGACAGGCCTCACAGGACAGTaGACAGGCTGGCAGGCGGGC +
Preference number: 4 (lower is better)
Translates to: TGLGLPNPFLNYHINTRTGLTGQ*TGWQAG
Trigger: GCCCGCCTGCCAGCCTGTGCACTGTCCTGTGAGGCC...TGTCCTGGTATTGATATGGTAATTCAGGAAAGGATTTGGAAGACCTAAGCCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp TCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGAGCCCATCAAACGTaGGGTAATGCCGGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: STTFNTPIHIGPAGNRKWGAHQT*GNAGPH
Trigger: ATGGGGACCGGCATTACCGCACGTTTGATGGGCTCC...CCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp TCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGTGCTCTTGACCAGGTaGACTTTGCATGCCCCCACG +
Preference number: 4 (lower is better)
Translates to: STTFNTPIHIGPAGNRKWVLLTR*TLHAPT
Trigger: CGTGGGGGCATGCAAAGTGCACCTGGTCAAGAGCAC...CCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp TTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGACCTCCTTACAGGTCCTaGAGCATCCTTCCAAGGAAG +
Preference number: 4 (lower is better)
Translates to: LIPPFTLGQLETESGAGRPPYRS*SILPRK
Trigger: CTTCCTTGGAAGGATGCTGCAGGACCTGTAAGGAGG...TCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp CCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTTCTTGCGGATGGTCATaGGGATGGTCACCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: PPLIPPFTLGQLETESGASCGWS*GWSPSC
Trigger: GCAAGAAGGTGACCATCCGCATGACCATCCGCAAGA...AGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp TTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGTGTTGTAGTTGTAGATaGTGGCGGATGGGCACCTCC +
Preference number: 4 (lower is better)
Translates to: FNTPIHIGPAGNRKWGWQCCSCR*WRMGTS
Trigger: GGAGGTGCCCATCCGCCAGCATCTACAACTACAACA...CTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp TTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGTGGCACAGAAGAGCTaGACAGAGCGCCGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: FLPPLIPPFTLGQLETESVAQKS*TERRCR
Trigger: CCTGCAGCGGCGCTCTGTGCAGCTCTTCTGTGCCAC...ACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp TCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGCAAGGATCTCACAAGTaGTCAGGGAGGCTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: STTFNTPIHIGPAGNRKWQGSHK*SGRLGL
Trigger: CAGCCCCAGCCTCCCTGAGCACTTGTGAGATCCTTG...CCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp TCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGCCCACTCGCCATGTGTaGACCTCCTGCTTGTCATCC +
Preference number: 4 (lower is better)
Translates to: STTFNTPIHIGPAGNRKWPTRHV*TSCLSS
Trigger: GGATGACAAGCAGGAGGTCCACACATGGCGAGTGGG...CCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp TTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGCTGCTGCCAAACTCCTaGGGGTTAGTTAGCTCTAGG +
Preference number: 4 (lower is better)
Translates to: FNTPIHIGPAGNRKWGWQLLPNS*GLVSSR
Trigger: CCTAGAGCTAACTAACCCCCAGGAGTTTGGCAGCAG...CTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp CCAGGCACCTTTCTTTGGACTACAGGAGATGCGAAGGTCACTGAGCTCACTCTGTGCTGCACTCCTTCTTaGCAAATGGTTCTCGGAGAG +
Preference number: 4 (lower is better)
Translates to: PGTFLWTTGDAKVTELTLCCTPS*QMVLGE
Trigger: CTCTCCGAGAACCATTTGCCAAGAAGGAGTGCAGCA...CAGAGTGAGCTCAGTGACCTTCGCATCTCCTGTAGTCCAAAGAAAGGTGCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp ACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCCATAAGCGGAGACGCTaGCACAGAAGCACTCACAGT +
Preference number: 4 (lower is better)
Translates to: TTFNTPIHIGPAGNRKWGHKRRR*HRSTHS
Trigger: ACTGTGAGTGCTTCTGTGCCAGCGTCTCCGCTTATG...GCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp TCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGCTGGGTCATGGGCCTTaGCCTTGTACAGAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: STTFNTPIHIGPAGNRKWLGHGP*PCTEQL
Trigger: CAGCTGCTCTGTACAAGGCCAAGGCCCATGACCCAG...CCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp TTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGACCACATCTGGGTCATaGGCCTTGGCCTTGTACAGA +
Preference number: 4 (lower is better)
Translates to: FNTPIHIGPAGNRKWGWQTTSGS*ALALYR
Trigger: TCTGTACAAGGCCAAGGCCCATGACCCAGATGTGGT...CTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp TTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGCGTGAAGGAAGAAGTTaGGTCTGTCTGCTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: FNTPIHIGPAGNRKWGWQREGRS*VCLLPP
Trigger: TGGAGGCAGCAGACAGACCCAACTTCTTCCTTCACG...CTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp ATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGCACAGCCTTCTACCCTaGGTACGTCCCGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: ISTTFNTPIHIGPAGNRKHSLLP*VRPGSW
Trigger: CCAGCTGCCGGGACGTACCCAGGGTAGAAGGCTGTG...CTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp CTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGGGAACCCAAACTGCTaGCTCCACACAGTCCTCCAA +
Preference number: 4 (lower is better)
Translates to: LPPLIPPFTLGQLETESGGNPNC*LHTVLQ
Trigger: TTGGAGGACTGTGTGGAGCCAGCAGTTTGGGTTCCC...CCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp AGATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAGGATGGCCAGGAGGCTaGCAGTCACTCCCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: RFLPPLIPPFTLGQLETEGWPGG*QSLPCW
Trigger: CCAGCAAGGGAGTGACTGCCAGCCTCCTGGCCATCC...TTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAATCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp CAGATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAACAGGCAAGGAGCCATaGCCTCGGACTGTCACAGCC +
Preference number: 4 (lower is better)
Translates to: QISTTFNTPIHIGPAGNRTGKEP*PRTVTA
Trigger: GGCTGTGACAGTCCGAGGCCATGGCTCCTTGCCTGT...TCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAATCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp ATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGCTGTTGACAGGCTaGCGGCAGCTGGGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: ISTTFNTPIHIGPAGNRKWLLTG*RQLGSL
Trigger: CAGAGACCCCAGCTGCCGCCAGCCTGTCAACAGCCA...CTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp AGATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAGCCCAGATGGTTCTGTaGTGGCCTCGTCCACCGGCT +
Preference number: 4 (lower is better)
Translates to: RFLPPLIPPFTLGQLETEAQMVL*WPRPPA
Trigger: AGCCGGTGGACGAGGCCACCACAGAACCATCTGGGC...TTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAATCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp ACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGTTGAACAGAGCTACGTaGCTCCCATCGAAGGTCACG +
Preference number: 4 (lower is better)
Translates to: TFNTPIHIGPAGNRKWGWLNRAT*LPSKVT
Trigger: CGTGACCTTCGATGGGAGCCACGTAGCTCTGTTCAA...CCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp CCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCGGTGAGCATTTCATCTaGGCTCTGGCTGAGGATGTA +
Preference number: 4 (lower is better)
Translates to: PLIPPFTLGQLETESGAGGEHFI*ALAEDV
Trigger: TACATCCTCAGCCAGAGCCCAGATGAAATGCTCACC...GCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp AGATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAGGCCCTGGGCCTTGCTaGTTTTGCTGGCCTCCACGA +
Preference number: 4 (lower is better)
Translates to: RFLPPLIPPFTLGQLETEGPGPC*FCWPPR
Trigger: TCGTGGAGGCCAGCAAAACCAGCAAGGCCCAGGGCC...TTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAATCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp TCCATGCTCAACACGTGCCAGATTTCTACCACCTTTAATACCCCCATTCACATTGCGAGCAGTCAGTTGTaGCGCAGCTGTCTGGGCGGA +
Preference number: 4 (lower is better)
Translates to: SMLNTCQISTTFNTPIHIASSQL*RSCLGG
Trigger: TCCGCCCAGACAGCTGCGCCACAACTGACTGCTCGC...AATGTGAATGGGGGTATTAAAGGTGGTAGAAATCTGGCACGTGTTGAGCATGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp CCAACAGACACTCTCTTGCTAAACAGTCCCATGGAGCACAGAGACTGGCACTGGTTCTCACACACACACTaGTACAGAGGGCAGCAGAGT +
Preference number: 4 (lower is better)
Translates to: PTDTLLLNSPMEHRDWHWFSHTH*YRGQQS
Trigger: ACTCTGCTGCCCTCTGTACCAGTGTGTGTGTGAGAA...CCAGTGCCAGTCTCTGTGCTCCATGGGACTGTTTAGCAAGAGAGTGTCTGTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp ACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCCATTGTGTACCTGGATaGAGAAGCTCTGTCCCTCGG +
Preference number: 4 (lower is better)
Translates to: TTFNTPIHIGPAGNRKWGHCVPG*RSSVPR
Trigger: CCGAGGGACAGAGCTTCTCCATCCAGGTACACAATG...GCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp TTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGGGGTCATTGTGTACCTaGATGGAGAAGCTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: FNTPIHIGPAGNRKWGWQGSLCT*MEKLCP
Trigger: GGGACAGAGCTTCTCCATCCAGGTACACAATGACCC...CTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp CCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTATGACATGTGGCAGTTaGACCCTCATGCCTCCATGG +
Preference number: 4 (lower is better)
Translates to: PPLIPPFTLGQLETESGAMTCGS*TLMPPW
Trigger: CCATGGAGGCATGAGGGTCCAACTGCCACATGTCAT...AGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp TTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGACTCAGGTACACCCACTaGAGACAGGAAGTCATCCTG +
Preference number: 4 (lower is better)
Translates to: LIPPFTLGQLETESGAGRLRYTH*RQEVIL
Trigger: CAGGATGACTTCCTGTCTCCAGTGGGTGTACCTGAG...TCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp TTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGCTCAGGTACACCCACTaGAGACAGGAAGTCATCCTG +
Preference number: 4 (lower is better)
Translates to: FNTPIHIGPAGNRKWGWQLRYTH*RQEVIL
Trigger: CAGGATGACTTCCTGTCTCCAGTGGGTGTACCTGAG...CTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp CTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGAGGGGCTATACTCCTTaGAGGCCTCACAGGACAGTG +
Preference number: 4 (lower is better)
Translates to: LPPLIPPFTLGQLETESGRGYTP*RPHRTV
Trigger: CACTGTCCTGTGAGGCCTCCAAGGAGTATAGCCCCT...CCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp TCCATGCTCAACACGTGCCAGATTTCTACCACCTTTAATACCCCCATTCACATTGCAGTGGCCCAGGGATaGGATGTCACTGTCTCCGGG +
Preference number: 4 (lower is better)
Translates to: SMLNTCQISTTFNTPIHIAVAQG*DVTVSG
Trigger: CCCGGAGACAGTGACATCCCATCCCTGGGCCACTGC...AATGTGAATGGGGGTATTAAAGGTGGTAGAAATCTGGCACGTGTTGAGCATGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp TTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGCAGTGGCCCAGGGATaGGATGTCACTGTCTCCGGG +
Preference number: 4 (lower is better)
Translates to: FLPPLIPPFTLGQLETESAVAQG*DVTVSG
Trigger: CCCGGAGACAGTGACATCCCATCCCTGGGCCACTGC...ACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp ACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGTGGCACACACAGGTATaGCAAGGAGACATCACCTGG +
Preference number: 4 (lower is better)
Translates to: TFNTPIHIGPAGNRKWGWWHTQV*QGDITW
Trigger: CCAGGTGATGTCTCCTTGCCATACCTGTGTGTGCCA...CCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp AGATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAACAGCAGGAGTCCTCCTaGAAGTGGGTGAGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: RFLPPLIPPFTLGQLETEQQESS*KWVRRR
Trigger: CCGCCTCCTCACCCACTTCCAGGAGGACTCCTGCTG...TTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAATCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp CCAACAGACACTCTCTTGCTAAACAGTCCCATGGAGCACAGAGACTGGCACTGGTCACACACTCGTACTTaGCGCAGCCACACACATTCT +
Preference number: 4 (lower is better)
Translates to: PTDTLLLNSPMEHRDWHWSHTRT*RSHTHS
Trigger: AGAATGTGTGTGGCTGCGCCAAGTACGAGTGTGTGA...CCAGTGCCAGTCTCTGTGCTCCATGGGACTGTTTAGCAAGAGAGTGTCTGTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp ATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTATTCATTCTTGCGGATaGTCATGCGGATGGTCACCT +
Preference number: 4 (lower is better)
Translates to: IPPFTLGQLETESGAGRGIHSCG*SCGWSP
Trigger: AGGTGACCATCCGCATGACCATCCGCAAGAATGAAT...ACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp CAGCCATCTGCAGGCCTGAGTGTTGCAGGTATAGCCCTCTTTCCTTTTACTGTGTGTAGTTGTAGATGCTaGCGGATGGGCACCTCCCAT +
Preference number: 4 (lower is better)
Translates to: QPSAGLSVAGIALFPFTVCSCRC*RMGTSH
Trigger: ATGGGAGGTGCCCATCCGCCAGCATCTACAACTACA...CACAGTAAAAGGAAAGAGGGCTATACCTGCAACACTCAGGCCTGCAGATGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp AGGCCTGAGTGTTGCAGGTATAGCCCTCTTTCCTTTTACTGTGTCTGGTTTCTTGGCAGGCACAGTCGGTaGGCTCCTGCACTGTATAGG +
Preference number: 4 (lower is better)
Translates to: RPECCRYSPLSFYCVWFLGRHSR*APALYR
Trigger: CCTATACAGTGCAGGAGCCCACCGACTGTGCCTGCC...AAGAAACCAGACACAGTAAAAGGAAAGAGGGCTATACCTGCAACACTCAGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp TTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGATCACATTGGGCCAGCTaGAAACAGAAAGTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: LIPPFTLGQLETESGAGRSHWAS*KQKVGL
Trigger: CAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGA...TCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp AGGCTGCTGCCCCTGGACCTAAAGCCCATTTTCCATCTCAAACCAGGGACAGAGTACCCCCATTCACATTaGGCCAGCTGGAAACAGAAA +
Preference number: 4 (lower is better)
Translates to: RLLPLDLKPIFHLKPGTEYPHSH*ASWKQK
Trigger: TTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTA...CTCTGTCCCTGGTTTGAGATGGAAAATGGGCTTTAGGTCCAGGGGCAGCAGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR TCA 90 bp CCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGAAATGCACCAGTGTaGAAAATCCCACTCGCCATG +
Preference number: 4 (lower is better)
Translates to: PPLIPPFTLGQLETESGAGNAPV*KIPLAM
Trigger: CATGGCGAGTGGGATTTTTCACACTGGTGCATTTCC...AGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp TCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGTCCCACAAGAGGGTaGTGTGCTCCTGTGGGAAAT +
Preference number: 4 (lower is better)
Translates to: STTFNTPIHIGPAGNRKWGPTRG*CAPVGN
Trigger: ATTTCCCACAGGAGCACATCACCCTCTTGTGGGACC...CCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp CAGGGCAGTGCTGGGGCCTGCACAACCTTATGTTCATGCCCTTCGGTTCCACGTGGGTCCTCATCTCATTaGTGGTTTTTAAGTCAAAGT +
Preference number: 4 (lower is better)
Translates to: QGSAGACTTLCSCPSVPRGSSSH*WFLSQS
Trigger: ACTTTGACTTAAAAACCATCAATGAGATGAGGACCC...ACGTGGAACCGAAGGGCATGAACATAAGGTTGTGCAGGCCCCAGCACTGCCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR TCA 90 bp TCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGAGACCCGTTGGCTGTaGCGTGAAGGAAGAAGTTGG +
Preference number: 4 (lower is better)
Translates to: STTFNTPIHIGPAGNRKWETRWL*REGRSW
Trigger: CCAACTTCTTCCTTCACGTCACAGCCAACGGGTCTC...CCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp TTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTCCTGGGGCTTTCCTGTaGCAGCTGTGGCTCCTCATC +
Preference number: 4 (lower is better)
Translates to: FLPPLIPPFTLGQLETESPGAFL*QLWLLI
Trigger: GATGAGGAGCCACAGCTGTCACAGGAAAGCCCCAGG...ACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp ACTGTGTCTGGTTTCTTGTGTAGTCAAAAAGGCCAAGAGAATGGGCCACTGCATTTGACTCAAGGGACATaGAGGGTGTGGCTGCCAGCC +
Preference number: 4 (lower is better)
Translates to: TVSGFLCSQKGQENGPLHLTQGT*RVWLPA
Trigger: GGCTGGCAGCCACACCCTTCATGTCCCTTGAGTCAA...ATGCAGTGGCCCATTCTCTTGGCCTTTTTGACTACACAAGAAACCAGACACAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR TCA 90 bp AGATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAATGGGCCTCAGCCAGCTaGGGCAACAGAACCAGCATG +
Preference number: 4 (lower is better)
Translates to: RFLPPLIPPFTLGQLETEWASAS*GNRTSM
Trigger: CATGCTGGTTCTGTTGCCTCAGCTGGCTGAGGCCCA...TTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp CCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTCTGTGTCCTCAATTCTaGATCCATACCTGCTCACCG +
Preference number: 4 (lower is better)
Translates to: PPLIPPFTLGQLETESGALCPQF*IHTCSP
Trigger: CGGTGAGCAGGTATGGATTCAGAATTGAGGACACAG...AGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp ACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCCTGGATCTGGATGTCTaGGGGAGTCAGGATCATGTA +
Preference number: 4 (lower is better)
Translates to: TTFNTPIHIGPAGNRKWGLDLDV*GSQDHV
Trigger: TACATGATCCTGACTCCCTCAGACATCCAGATCCAG...GCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp CTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGCACACTCGCCTCCATTaGAGCAGGAGAACAAGTAGG +
Preference number: 4 (lower is better)
Translates to: LPPLIPPFTLGQLETESGHTRLH*SRRTSR
Trigger: CCTACTTGTTCTCCTGCTTCAATGGAGGCGAGTGTG...CCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp CTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCACTCCCACTTGCCTaGGGTGCATGTGCAAGTATT +
Preference number: 4 (lower is better)
Translates to: LPPLIPPFTLGQLETESGALPLA*GACASI
Trigger: AATACTTGCACATGCACCTCAGGCAAGTGGGAGTGC...CCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp TCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGAATGTCACCAGTCACTaGGCACTCAGCTGGGCAGAC +
Preference number: 4 (lower is better)
Translates to: STTFNTPIHIGPAGNRKWNVTSH*ALSWAD
Trigger: GTCTGCCCAGCTGAGTGCTCAGTGACTGGTGACATT...CCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp ACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGTGCTATCACAGCTCATaGCTCCATCTTTGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: TFNTPIHIGPAGNRKWGWCYHSS*LHLCSG
Trigger: GCCACTGCAAAGATGGAGTCATGAGCTGTGATAGCA...CCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp CAGCCATCTGCAGGCCTGAGTGTTGCAGGTATAGCCCTCTTTCCTTTTACTGTGAGAGAAGCTGACATCTaGTGTGCTCTTGACCAGGTG +
Preference number: 4 (lower is better)
Translates to: QPSAGLSVAGIALFPFTVREADI*CALDQV
Trigger: CACCTGGTCAAGAGCACATCAGATGTCAGCTTCTCT...CACAGTAAAAGGAAAGAGGGCTATACCTGCAACACTCAGGCCTGCAGATGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR TCA 90 bp ACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCAGAGAAGCTGACATCTaGTGTGCTCTTGACCAGGTG +
Preference number: 4 (lower is better)
Translates to: TTFNTPIHIGPAGNRKWGREADI*CALDQV
Trigger: CACCTGGTCAAGAGCACATCAGATGTCAGCTTCTCT...GCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp ACTGTGTCTGGTTTCTTGTGTAGTCAAAAAGGCCAAGAGAATGGGCCACTGCATCAGGATGGGCAGGGGTaGCCCTTTCTGGTTACTCCT +
Preference number: 4 (lower is better)
Translates to: TVSGFLCSQKGQENGPLHQDGQG*PFLVTP
Trigger: AGGAGTAACCAGAAAGGGTCACCCCTGCCCATCCTG...ATGCAGTGGCCCATTCTCTTGGCCTTTTTGACTACACAAGAAACCAGACACAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp CTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGCACAAGAGGGTGATGTaGTCCTGTGGGAAATGCACC +
Preference number: 4 (lower is better)
Translates to: LPPLIPPFTLGQLETESGHKRVM*SCGKCT
Trigger: GGTGCATTTCCCACAGGAGCACATCACCCTCTTGTG...CCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp TCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGAGTCACCACCCTGGCTaGAGCCACATGTGTCTGTCA +
Preference number: 4 (lower is better)
Translates to: STTFNTPIHIGPAGNRKWSHHPG*SHMCLS
Trigger: TGACAGACACATGTGGCTGCAGCCAGGGTGGTGACT...CCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp CAGATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGATGGCACCTGACACCATaGCAGGTGTGGGTGTCTGCA +
Preference number: 4 (lower is better)
Translates to: QISTTFNTPIHIGPAGNRWHLTP*QVWVSA
Trigger: TGCAGACACCCACACCTGGCATGGTGTCAGGTGCCA...TCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAATCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp CAGATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGATCTGGAGGAGGGACTTaGTGTCAAGGAGGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: QISTTFNTPIHIGPAGNRSGGGT*CQGGLW
Trigger: CCACAGCCCTCCTTGACAGCAAGTCCCTCCTCCAGA...TCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAATCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp TTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTTGGCGGACGCAGTCCTaGTCGGCGATTGGAACACAG +
Preference number: 4 (lower is better)
Translates to: FLPPLIPPFTLGQLETESWRTQS*SAIGTQ
Trigger: CTGTGTTCCAATCGCCGAGCAGGACTGCGTCCGCCA...ACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp TTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTCATGGCCCTGGGCCTTaGTGGTTTTGCTGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: FLPPLIPPFTLGQLETESHGPGP*WFCWPP
Trigger: TGGAGGCCAGCAAAACCAGCAAGGCCCAGGGCCATG...ACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp TCCATGCTCAACACGTGCCAGATTTCTACCACCTTTAATACCCCCATTCACATTTGCGGTTGGACACCATaGGAAGGCAGGGCGAGCAGT +
Preference number: 4 (lower is better)
Translates to: SMLNTCQISTTFNTPIHICGWTP*EGRASS
Trigger: ACTGCTCGCCCTGCCTTCGCATGGTGTCCAACCGCA...AATGTGAATGGGGGTATTAAAGGTGGTAGAAATCTGGCACGTGTTGAGCATGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp CTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGAGCGCCGCCACTCGATaGACACATGAAATTTGTGGC +
Preference number: 4 (lower is better)
Translates to: LPPLIPPFTLGQLETESGSAATR*THEICG
Trigger: GCCACAAATTTCATGTGTGCATCGAGTGGCGGCGCT...CCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp TCCATGCTCAACACGTGCCAGATTTCTACCACCTTTAATACCCCCATTCACATTCAGTGCACAGTGCATTaGCGGAGCTGGGTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: SMLNTCQISTTFNTPIHIQCTVH*RSWVLQ
Trigger: CTGGAGGACCCAGCTCCGGCAATGCACTGTGCACTG...AATGTGAATGGGGGTATTAAAGGTGGTAGAAATCTGGCACGTGTTGAGCATGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp CTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGCCACATGGGGCATTCTaGAATGTCACGGTGAAGGTG +
Preference number: 4 (lower is better)
Translates to: LPPLIPPFTLGQLETESGPHGAF*NVTVKV
Trigger: CACCTTCACCGTGACATTGCAGAATGCCCCATGTGG...CCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp TTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTCAGAAGGACATCCCCTaGCTGGGTCAGGGTCACCTG +
Preference number: 4 (lower is better)
Translates to: FLPPLIPPFTLGQLETESQKDIP*LGQGHL
Trigger: CAGGTGACCCTGACCCAGGCAGGGGATGTCCTTCTG...ACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp ATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGCAGAAGGACATCCCCTaGCTGGGTCAGGGTCACCTG +
Preference number: 4 (lower is better)
Translates to: ISTTFNTPIHIGPAGNRKQKDIP*LGQGHL
Trigger: CAGGTGACCCTGACCCAGGCAGGGGATGTCCTTCTG...CTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp TTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGACAAAAAGTTGTGGGGTaGTCTCAGGTACACCCACTG +
Preference number: 4 (lower is better)
Translates to: LIPPFTLGQLETESGAGRQKVVG*SQVHPL
Trigger: CAGTGGGTGTACCTGAGAGCACCCCACAACTTTTTG...TCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp CCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTACATTCTCCACGCTGTaGATGAACTCCTCATCCAGC +
Preference number: 4 (lower is better)
Translates to: PPLIPPFTLGQLETESGATFSTL*MNSSSS
Trigger: GCTGGATGAGGAGTTCATGCACAGCGTGGAGAATGT...AGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp ATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGGTCTGCGATCCAGGATaGCCCGGGCAAGAACAGGGA +
Preference number: 4 (lower is better)
Translates to: ISTTFNTPIHIGPAGNRKVCDPG*PGQEQG
Trigger: TCCCTGTTCTTGCCCGGGGCATCCTGGATCGCAGAC...CTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp AGATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAATGGGCCACTGCATCCTaGCCCTGTGCTTGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: RFLPPLIPPFTLGQLETEWATAS*PCAWSW
Trigger: CCAAGACCAAGCACAGGGGCAGGATGCAGTGGCCCA...TTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp ACTGTGTCTGGTTTCTTGTGTAGTCAAAAAGGCCAAGAGAATGGGCCACTGCATGCCTGGAGCTGCATTTaGAGGCTGAAGGTACCCCCT +
Preference number: 4 (lower is better)
Translates to: TVSGFLCSQKGQENGPLHAWSCI*RLKVPP
Trigger: AGGGGGTACCTTCAGCCTGCAAATGCAGCTCCAGGC...ATGCAGTGGCCCATTCTCTTGGCCTTTTTGACTACACAAGAAACCAGACACAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp CAGCCATCTGCAGGCCTGAGTGTTGCAGGTATAGCCCTCTTTCCTTTTACTGTGACAACCTTATGTTCATaGCCTTCGGTTCCACGTGGC +
Preference number: 4 (lower is better)
Translates to: QPSAGLSVAGIALFPFTVTTLCS*PSVPRG
Trigger: GCCACGTGGAACCGAAGGGCATGAACATAAGGTTGT...CACAGTAAAAGGAAAGAGGGCTATACCTGCAACACTCAGGCCTGCAGATGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp AGATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAACAGTTCACGAAGACCTaGCCTGCTGGGCAGGCAGCA +
Preference number: 4 (lower is better)
Translates to: RFLPPLIPPFTLGQLETEQFTKT*PAGQAA
Trigger: TGCTGCCTGCCCAGCAGGCCAGGTCTTCGTGAACTG...TTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp ACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCGGTGATGTGCTCCTGTaGGAAATGCACCAGTGTGAA +
Preference number: 4 (lower is better)
Translates to: TTFNTPIHIGPAGNRKWGGDVLL*EMHQCE
Trigger: TTCACACTGGTGCATTTCCCACAGGAGCACATCACC...GCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp TCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGCCTGGACGTGCACTGTaGTTCTCTGGTCCCACAAGA +
Preference number: 4 (lower is better)
Translates to: STTFNTPIHIGPAGNRKWPGRAL*FSGPTR
Trigger: TCTTGTGGGACCAGAGAACCACAGTGCACGTCCAGG...CCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp TTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTCTGGTGTATGGGGGATaGCCAGGAGGCTGGCAGTCA +
Preference number: 4 (lower is better)
Translates to: FLPPLIPPFTLGQLETESLVYGG*PGGWQS
Trigger: TGACTGCCAGCCTCCTGGCCATCCCCCATACACCAG...ACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp TTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGTGAAAGGCAGTACTaGGCTAAGTGTCTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: FNTPIHIGPAGNRKWGWQSERQY*AKCLSR
Trigger: CCTGCTCAGACACTTAGCCCAGTACTGCCTTTCACT...CTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp CAGATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAGGACAACAGATACCATaGAGGCCGTGCCCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: QISTTFNTPIHIGPAGNRGQQIP*RPCPQP
Trigger: TGGCTGAGGGCACGGCCTCCATGGTATCTGTTGTCC...TCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAATCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp TTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTCAGATGGTTCTGTGGTaGCCTCGTCCACCGGCTCTG +
Preference number: 4 (lower is better)
Translates to: FLPPLIPPFTLGQLETESQMVLW*PRPPAL
Trigger: CAGAGCCGGTGGACGAGGCCACCACAGAACCATCTG...ACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp AGATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAACAGATGGTTCTGTGGTaGCCTCGTCCACCGGCTCTG +
Preference number: 4 (lower is better)
Translates to: RFLPPLIPPFTLGQLETEQMVLW*PRPPAL
Trigger: CAGAGCCGGTGGACGAGGCCACCACAGAACCATCTG...TTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp CCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTCGATTGGAACACAGGTaGTGGATGTATTGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: PPLIPPFTLGQLETESGARLEHR*WMYWPQ
Trigger: CTGAGGCCAATACATCCACCACCTGTGTTCCAATCG...AGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp ACTGTGTCTGGTTTCTTGTGTAGTCAAAAAGGCCAAGAGAATGGGCCACTGCATTTCACGCGAATCAGCTaGCCCTCCAGGCAGATGTGG +
Preference number: 4 (lower is better)
Translates to: TVSGFLCSQKGQENGPLHFTRIS*PSRQMW
Trigger: CCACATCTGCCTGGAGGGCCAGCTGATTCGCGTGAA...ATGCAGTGGCCCATTCTCTTGGCCTTTTTGACTACACAAGAAACCAGACACAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp AACCTTATGTTCATGCCCTTCGGTTCCACGTGGCACAAAGTGGCACAGGGGGTGAGGATCATGTACATGTaGCCTGTGTCCTCAATTCTG +
Preference number: 4 (lower is better)
Translates to: NLMFMPFGSTWHKVAQGVRIMYM*PVSSIL
Trigger: CAGAATTGAGGACACAGGCCACATGTACATGATCCT...CACCCCCTGTGCCACTTTGTGCCACGTGGAACCGAAGGGCATGAACATAAGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp AATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGAGGATCATGTACATGTaGCCTGTGTCCTCAATTCTG +
Preference number: 4 (lower is better)
Translates to: NTPIHIGPAGNRKWGWQRRIMYM*PVSSIL
Trigger: CAGAATTGAGGACACAGGCCACATGTACATGATCCT...CCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp TCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGAGCTGTGGAGCCACTaGATCTGGATGTCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: STTFNTPIHIGPAGNRKWELWSH*IWMSEG
Trigger: TCCCTCAGACATCCAGATCCAGTGGCTCCACAGCTC...CCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp ACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGTTCTCACACACACACTaGTACAGAGGGCAGCAGAGT +
Preference number: 4 (lower is better)
Translates to: TFNTPIHIGPAGNRKWGWFSHTH*YRGQQS
Trigger: ACTCTGCTGCCCTCTGTACCAGTGTGTGTGTGAGAA...CCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp TACAGGCTTAGGTCTTCCAAATCCTTTCCTGAATTACCATATCAATACCAGGACCATGGCCACGGAGTCTaGGGCTTCAGCCTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: YRLRSSKSFPELPYQYQDHGHGV*GFSLLA
Trigger: GGCCAGCAGGCTGAAGCCCCAGACTCCGTGGCCATG...GTCCTGGTATTGATATGGTAATTCAGGAAAGGATTTGGAAGACCTAAGCCTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp ATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGGCAGTCACAGAAGGCTaGGTGCACACACTCGCCTCC +
Preference number: 4 (lower is better)
Translates to: ISTTFNTPIHIGPAGNRKAVTEG*VHTLAS
Trigger: GGAGGCGAGTGTGTGCACCCAGCCTTCTGTGACTGC...CTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp ACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCCAGCCCAGAAGCTCTaGACTCATCTTGATGTAGAC +
Preference number: 4 (lower is better)
Translates to: TFNTPIHIGPAGNRKWGWPAQKL*THLDVD
Trigger: GTCTACATCAAGATGAGTCCAGAGCTTCTGGGCTGG...CCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp CAGATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGATTCCCACACAGCCCATaGGTCCAGCCCAGAAGCTCT +
Preference number: 4 (lower is better)
Translates to: QISTTFNTPIHIGPAGNRFPHSP*VQPRSS
Trigger: AGAGCTTCTGGGCTGGACCCATGGGCTGTGTGGGAA...TCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAATCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp TCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGACACAGGCTCCATCTTaGTTCAGGCCACATGGGGCA +
Preference number: 4 (lower is better)
Translates to: STTFNTPIHIGPAGNRKWTQAPS*FRPHGA
Trigger: TGCCCCATGTGGCCTGAACCAAGATGGAGCCTGTGT...CCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp ACAGGCTTAGGTCTTCCAAATCCTTTCCTGAATTACCATATCAATACCAGGACACACAGGCCTCAGGGCTaGCCAGGTCCTGGCAGGTAC +
Preference number: 4 (lower is better)
Translates to: TGLGLPNPFLNYHINTRTHRPQG*PGPGRY
Trigger: GTACCTGCCAGGACCTGGCCAGCCCTGAGGCCTGTG...TGTCCTGGTATTGATATGGTAATTCAGGAAAGGATTTGGAAGACCTAAGCCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp TCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGTCTTTGCAGTGGCAGTaGCCCAGGGATGGGATGTCA +
Preference number: 4 (lower is better)
Translates to: STTFNTPIHIGPAGNRKWSLQWQ*PRDGMS
Trigger: TGACATCCCATCCCTGGGCCACTGCCACTGCAAAGA...CCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp TTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTCGGGACAATGGTGTCTaGGGCTTGGCACTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: FLPPLIPPFTLGQLETESRDNGV*GLALVL
Trigger: CAGCACCAGTGCCAAGCCCCAGACACCATTGTCCCG...ACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp TCCATGCTCAACACGTGCCAGATTTCTACCACCTTTAATACCCCCATTCACATTAGCAGGGGTCCTTGGTaGGTAGGAGCAAGGCCACCT +
Preference number: 4 (lower is better)
Translates to: SMLNTCQISTTFNTPIHISRGPW*VGARPP
Trigger: AGGTGGCCTTGCTCCTACCCACCAAGGACCCCTGCT...AATGTGAATGGGGGTATTAAAGGTGGTAGAAATCTGGCACGTGTTGAGCATGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp AGATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGCAGGGGTCCTTGGTaGGTAGGAGCAAGGCCACCT +
Preference number: 4 (lower is better)
Translates to: RFLPPLIPPFTLGQLETESRGPW*VGARPP
Trigger: AGGTGGCCTTGCTCCTACCCACCAAGGACCCCTGCT...TTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp ACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCCCTCACACAGAGTCTaGTTACACACACAGACAGTC +
Preference number: 4 (lower is better)
Translates to: TFNTPIHIGPAGNRKWGWPSHRV*LHTQTV
Trigger: GACTGTCTGTGTGTGTAACCAGACTCTGTGTGAGGG...CCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp TTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGATCACACACTCGTACTTaGCGCAGCCACACACATTCT +
Preference number: 4 (lower is better)
Translates to: LIPPFTLGQLETESGAGRSHTRT*RSHTHS
Trigger: AGAATGTGTGTGGCTGCGCCAAGTACGAGTGTGTGA...TCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp TCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGAGGGCCTTGAAGGCATaGGCTGTCAACCAGCATCCT +
Preference number: 4 (lower is better)
Translates to: STTFNTPIHIGPAGNRKWRALKA*AVNQHP
Trigger: AGGATGCTGGTTGACAGCCCATGCCTTCAAGGCCCT...CCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR TCA 90 bp CAGATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGACCGTTGGCTGTGACGTaGAGGAAGAAGTTGGGTCTG +
Preference number: 4 (lower is better)
Translates to: QISTTFNTPIHIGPAGNRPLAVT*RKKLGL
Trigger: CAGACCCAACTTCTTCCTTCACGTCACAGCCAACGG...TCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAATCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp CAGATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAGAGACCCGTTGGCTGTaGCGTGAAGGAAGAAGTTGG +
Preference number: 4 (lower is better)
Translates to: QISTTFNTPIHIGPAGNRETRWL*REGRSW
Trigger: CCAACTTCTTCCTTCACGTCACAGCCAACGGGTCTC...TCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAATCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp AGATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAACTGGGAGGGACGAGTTaGCTCAAGGGACATGAAGGG +
Preference number: 4 (lower is better)
Translates to: RFLPPLIPPFTLGQLETELGGTS*LKGHEG
Trigger: CCCTTCATGTCCCTTGAGTCAACTCGTCCCTCCCAG...TTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp CTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGCTGGATCTGGATGTCTaGGGGAGTCAGGATCATGTA +
Preference number: 4 (lower is better)
Translates to: LPPLIPPFTLGQLETESGLDLDV*GSQDHV
Trigger: TACATGATCCTGACTCCCTCAGACATCCAGATCCAG...CCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp CAGATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGACACGATCATGAGTCCTaGGCTGTGGAGCCACTGGAT +
Preference number: 4 (lower is better)
Translates to: QISTTFNTPIHIGPAGNRHDHES*AVEPLD
Trigger: ATCCAGTGGCTCCACAGCTCAGGACTCATGATCGTG...TCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAATCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp AGATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAACCACAGCTCACAGAATaGCTCCGGAGGCACAAAGCG +
Preference number: 4 (lower is better)
Translates to: RFLPPLIPPFTLGQLETEPQLTE*LRRHKA
Trigger: CGCTTTGTGCCTCCGGAGTCATTCTGTGAGCTGTGG...TTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp CTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGCACTCGATGCACACATaGAATTTGTGGCACATGGCC +
Preference number: 4 (lower is better)
Translates to: LPPLIPPFTLGQLETESGHSMHT*NLWHMA
Trigger: GGCCATGTGCCACAAATTTCATGTGTGCATCGAGTG...CCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp TACAGGCTTAGGTCTTCCAAATCCTTTCCTGAATTACCATATCAATACCAGGACCAAACATCTCCCCCGTaGGCACGCTGCAGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: YRLRSSKSFPELPYQYQDQTSPP*ARCRPA
Trigger: TGCAGGCCTGCAGCGTGCTCACGGGGGAGATGTTTG...GTCCTGGTATTGATATGGTAATTCAGGAAAGGATTTGGAAGACCTAAGCCTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp ACTGTGTCTGGTTTCTTGTGTAGTCAAAAAGGCCAAGAGAATGGGCCACTGCATCTCAGGTTCAGCAGTTaGTGCTCACACGTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: TVSGFLCSQKGQENGPLHLRFSS*CSHVLS
Trigger: GGAGAGGACGTGTGAGCAGCAACTGCTGAACCTGAG...ATGCAGTGGCCCATTCTCTTGGCCTTTTTGACTACACAAGAAACCAGACACAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp TTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGTGCTCCTGTGGGAAATaGACCAGTGTGAAAAATCCC +
Preference number: 4 (lower is better)
Translates to: FNTPIHIGPAGNRKWGWQCSCGK*TSVKNP
Trigger: GGGATTTTTCACACTGGTGCATTTCCCACAGGAGCA...CTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp TCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGAAGCTCACAATGTCTaGTGGCGCCACATCCTCTGT +
Preference number: 4 (lower is better)
Translates to: STTFNTPIHIGPAGNRKWEAHNV*WRHILC
Trigger: ACAGAGGATGTGGCGCCAGCAGACATTGTGAGCTTC...CCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp AGATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAGAGGGAGGGTCTCATTaGCAAGGGCCTCTGTGGGAA +
Preference number: 4 (lower is better)
Translates to: RFLPPLIPPFTLGQLETEEGGSH*QGPLWE
Trigger: TTCCCACAGAGGCCCTTGGCAATGAGACCCTCCCTC...TTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp CCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGATGTTAGGGCTTCCTaGAAAGATCACAGTCACCCT +
Preference number: 4 (lower is better)
Translates to: PPLIPPFTLGQLETESGADVRAS*KDHSHP
Trigger: AGGGTGACTGTGATCTTTGCAGGAAGCCCTAACATC...AGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp CAGATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAGTGGGCAGAGACACTTaGTTGGATAGGATGGCCACC +
Preference number: 4 (lower is better)
Translates to: QISTTFNTPIHIGPAGNRVGRDT*LDRMAT
Trigger: GGTGGCCATCCTATCCAAGCAAGTGTCTCTGCCCAC...TCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAATCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp ACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCGGTAAGGTCATTGGCTaGATCTCCATCACAGATACC +
Preference number: 4 (lower is better)
Translates to: TTFNTPIHIGPAGNRKWGGKVIG*ISITDT
Trigger: GGTATCTGTGATGGAGATGCAGCCAATGACCTTACC...GCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp CCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGTAAGGTCATTGGCTaGATCTCCATCACAGATACC +
Preference number: 4 (lower is better)
Translates to: PPLIPPFTLGQLETESGAGKVIG*ISITDT
Trigger: GGTATCTGTGATGGAGATGCAGCCAATGACCTTACC...AGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp TACAGGCTTAGGTCTTCCAAATCCTTTCCTGAATTACCATATCAATACCAGGACAGGGCCACGCAGGGCTaGTGCACGTACTTGGTGTCC +
Preference number: 4 (lower is better)
Translates to: YRLRSSKSFPELPYQYQDRATQG*CTYLVS
Trigger: GGACACCAAGTACGTGCAGCAGCCCTGCGTGGCCCT...GTCCTGGTATTGATATGGTAATTCAGGAAAGGATTTGGAAGACCTAAGCCTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp CAGATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGATTAGGGGCCTGCTCCTaGCAGCTGTGCACAAACTCA +
Preference number: 4 (lower is better)
Translates to: QISTTFNTPIHIGPAGNRLGACS*QLCTNS
Trigger: TGAGTTTGTGCACAGCTGGCAGGAGCAGGCCCCTAA...TCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAATCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp TTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTATGGTTCCTGGGTTCTaGTGTAGGCACGGTGGGCGA +
Preference number: 4 (lower is better)
Translates to: FLPPLIPPFTLGQLETESMVPGF*CRHGGR
Trigger: TCGCCCACCGTGCCTACAGCAGAACCCAGGAACCAT...ACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp CCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCTGCATGTGCAAGTATTaGAGTCTTCCTTCACCACAG +
Preference number: 4 (lower is better)
Translates to: PLIPPFTLGQLETESGAGCMCKY*SLPSPQ
Trigger: CTGTGGTGAAGGAAGACTGCAATACTTGCACATGCA...GCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp TCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGTTCACAGGGGTGCTaGTCCTGCATTCATTCTTGC +
Preference number: 4 (lower is better)
Translates to: STTFNTPIHIGPAGNRKWGSQGC*SCIHSC
Trigger: GCAAGAATGAATGCAGGAGCAGCACCCCTGTGAACC...CCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp ACTGTGTCTGGTTTCTTGTGTAGTCAAAAAGGCCAAGAGAATGGGCCACTGCATCCTCACGGCAGCACTTaGAGAATCGGGCATAGGTGT +
Preference number: 4 (lower is better)
Translates to: TVSGFLCSQKGQENGPLHPHGST*RIGHRC
Trigger: ACACCTATGCCCGATTCTGCAAGTGCTGCCGTGAGG...ATGCAGTGGCCCATTCTCTTGGCCTTTTTGACTACACAAGAAACCAGACACAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp CCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCTCCATGCTCAACACGTaGCAGATTTCTACCACCTTT +
Preference number: 4 (lower is better)
Translates to: PLIPPFTLGQLETESGAGSMLNT*QISTTF
Trigger: AAAGGTGGTAGAAATCTGGCACGTGTTGAGCATGGA...GCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp CTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGATCCAGGAAGCTCTCTaGACTAGGATTTCCGGAGTC +
Preference number: 4 (lower is better)
Translates to: LPPLIPPFTLGQLETESGIQEAL*TRISGV
Trigger: GACTCCGGAAATCCTAGTCCAGAGAGCTTCCTGGAT...CCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp ACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGACATCAACCACAGGGTaGCAGATCTCAAACACCTCA +
Preference number: 4 (lower is better)
Translates to: TFNTPIHIGPAGNRKWGWTSTTG*QISNTS
Trigger: TGAGGTGTTTGAGATCTGCCACCCTGTGGTTGATGT...CCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp CAGATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAGCTCACAATGTCTGCTaGCGCCACATCCTCTGTCCT +
Preference number: 4 (lower is better)
Translates to: QISTTFNTPIHIGPAGNRAHNVC*RHILCP
Trigger: AGGACAGAGGATGTGGCGCCAGCAGACATTGTGAGC...TCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAATCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp ATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGAAGGAGGCATGCTGTTaGAAGGTGTCACGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: ISTTFNTPIHIGPAGNRKKEACC*KVSRPC
Trigger: GCAGGGCCGTGACACCTTCCAACAGCATGCCTCCTT...CTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp CAGATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAACACCATGCCAGGTGTaGGTGTCTGCAGTGCAACAG +
Preference number: 4 (lower is better)
Translates to: QISTTFNTPIHIGPAGNRTPCQV*VSAVQQ
Trigger: CTGTTGCACTGCAGACACCCACACCTGGCATGGTGT...TCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAATCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp ATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGTCAAGGAGGGCTGTaGGGGTGTCGTCCTAACAGG +
Preference number: 4 (lower is better)
Translates to: ISTTFNTPIHIGPAGNRKCQGGL*GCRPNR
Trigger: CCTGTTAGGACGACACCCCCACAGCCCTCCTTGACA...CTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp TACAGGCTTAGGTCTTCCAAATCCTTTCCTGAATTACCATATCAATACCAGGACGAGACCTGGTGGCCATaGTGGTATGCTGGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: YRLRSSKSFPELPYQYQDETWWP*WYAGLG
Trigger: GCCCAGCCCAGCATACCACCATGGCCACCAGGTCTC...GTCCTGGTATTGATATGGTAATTCAGGAAAGGATTTGGAAGACCTAAGCCTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp TTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGCAGAGCTGGAGACCTaGTGGCCATGGTGGTATGCT +
Preference number: 4 (lower is better)
Translates to: FLPPLIPPFTLGQLETESAELET*WPWWYA
Trigger: AGCATACCACCATGGCCACCAGGTCTCCAGCTCTGC...ACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp ACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGTGGTGCTCTTTCGTaGGACAACAGATACCATGGA +
Preference number: 4 (lower is better)
Translates to: TTFNTPIHIGPAGNRKWGCGALS*DNRYHG
Trigger: TCCATGGTATCTGTTGTCCCACGAAAGAGCACCACA...GCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp ACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGAACCATACATGGAAGTaGGCAGAGACACTTGCTTGG +
Preference number: 4 (lower is better)
Translates to: TFNTPIHIGPAGNRKWGWNHTWK*AETLAW
Trigger: CCAAGCAAGTGTCTCTGCCCACTTCCATGTATGGTT...CCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp AGATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAGCTGCTGCACGTACTTaGTGTCCCGGATCCACAGCT +
Preference number: 4 (lower is better)
Translates to: RFLPPLIPPFTLGQLETEAAART*CPGSTA
Trigger: AGCTGTGGATCCGGGACACCAAGTACGTGCAGCAGC...TTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp ACTGTGTCTGGTTTCTTGTGTAGTCAAAAAGGCCAAGAGAATGGGCCACTGCATCATCCTGGCATGTCTTaGGTGGCTCACAGGCTGTCA +
Preference number: 4 (lower is better)
Translates to: TVSGFLCSQKGQENGPLHHPGMS*VAHRLS
Trigger: TGACAGCCTGTGAGCCACCCAAGACATGCCAGGATG...ATGCAGTGGCCCATTCTCTTGGCCTTTTTGACTACACAAGAAACCAGACACAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp ATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTTCGGGGATGGAGTCTaGACAGTCACCACAGGCGCA +
Preference number: 4 (lower is better)
Translates to: ISTTFNTPIHIGPAGNRKFGDGV*TVTTGA
Trigger: TGCGCCTGTGGTGACTGTCCAGACTCCATCCCCGAA...CTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp TTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTAGGATGGTGCACACTTaGCCCGATGGAGCCGCCTTT +
Preference number: 4 (lower is better)
Translates to: FLPPLIPPFTLGQLETESRMVHT*PDGAAF
Trigger: AAAGGCGGCTCCATCGGGCCAAGTGTGCACCATCCT...ACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp ATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGACCCTCATGCCTCCATaGGTGACCTCCTTGGCCAGA +
Preference number: 4 (lower is better)
Translates to: ISTTFNTPIHIGPAGNRKTLMPP*VTSLAR
Trigger: TCTGGCCAAGGAGGTCACCCATGGAGGCATGAGGGT...CTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp TCCATGCTCAACACGTGCCAGATTTCTACCACCTTTAATACCCCCATTCACATTGCTCCCCATGACATGTaGCAGTTGGACCCTCATGCC +
Preference number: 4 (lower is better)
Translates to: SMLNTCQISTTFNTPIHIAPHDM*QLDPHA
Trigger: GGCATGAGGGTCCAACTGCCACATGTCATGGGGAGC...AATGTGAATGGGGGTATTAAAGGTGGTAGAAATCTGGCACGTGTTGAGCATGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp CTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGCCAGCCCAGAAGCTCTaGACTCATCTTGATGTAGAC +
Preference number: 4 (lower is better)
Translates to: LPPLIPPFTLGQLETESGPAQKL*THLDVD
Trigger: GTCTACATCAAGATGAGTCCAGAGCTTCTGGGCTGG...CCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp ACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTCACCAGATCATCCTTaGGGTCAGCATTGTTGTTCC +
Preference number: 4 (lower is better)
Translates to: TTFNTPIHIGPAGNRKWGSPDHP*GQHCCS
Trigger: GGAACAACAATGCTGACCCCAAGGATGATCTGGTGA...GCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp CTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGTTGGTTCAGGCCACATaGGGCATTCTGCAATGTCAC +
Preference number: 4 (lower is better)
Translates to: LPPLIPPFTLGQLETESGLVQAT*GILQCH
Trigger: GTGACATTGCAGAATGCCCCATGTGGCCTGAACCAA...CCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp GGCCCTAGAATCCACCATCTTTGTCTTTGGGAACTCCTTCTGGGCAGCCATCTGGGGATGATCTTGTACTaGTCAAACAGAAGGACATCC +
Preference number: 4 (lower is better)
Translates to: GPRIHHLCLWELLLGSHLGMILY*SNRRTS
Trigger: GGATGTCCTTCTGTTTGACCAGTACAAGATCATCCC...CAGATGGCTGCCCAGAAGGAGTTCCCAAAGACAAAGATGGTGGATTCTAGGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp CCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTATTGCCAAAAAGTTGTaGGGTGCTCTCAGGTACACC +
Preference number: 4 (lower is better)
Translates to: PPLIPPFTLGQLETESGAIAKKL*GALRYT
Trigger: GGTGTACCTGAGAGCACCCCACAACTTTTTGGCAAT...AGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp TTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGATTTCTCCCACAGATaGCACCGGGGCACCGGGATT +
Preference number: 4 (lower is better)
Translates to: FLPPLIPPFTLGQLETESDFSHR*HRGTGI
Trigger: AATCCCGGTGCCCCGGTGCCATCTGTGGGAGAAATC...ACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp AGATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAGCACCCAGGTGGCATTaGTGGCACAGAAGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: RFLPPLIPPFTLGQLETEAPRWH*WHRRAA
Trigger: TGCAGCTCTTCTGTGCCACCAATGCCACCTGGGTGC...TTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp TCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGTATAGGGCACCCAGGTaGCATTGGTGGCACAGAAGA +
Preference number: 4 (lower is better)
Translates to: STTFNTPIHIGPAGNRKWYRAPR*HWWHRR
Trigger: TCTTCTGTGCCACCAATGCCACCTGGGTGCCCTATA...CCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp TCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGTCACATTGGGCCAGCTaGAAACAGAAAGTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: STTFNTPIHIGPAGNRKWSHWAS*KQKVGL
Trigger: CAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGA...CCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp ACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGTACCCCCATTCACATTaGGCCAGCTGGAAACAGAAA +
Preference number: 4 (lower is better)
Translates to: TFNTPIHIGPAGNRKWGWYPHSH*ASWKQK
Trigger: TTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTA...CCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp CAGATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGACTGAGCCCTCAACTGTaGCACTTTCCCATGTGCGGA +
Preference number: 4 (lower is better)
Translates to: QISTTFNTPIHIGPAGNRLSPQL*HFPMCG
Trigger: TCCGCACATGGGAAAGTGCCACAGTTGAGGGCTCAG...TCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAATCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR TCA 90 bp ACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCGTCTGTCAGGCAGTTTaGGTAAAACCAAGTGACATC +
Preference number: 4 (lower is better)
Translates to: TTFNTPIHIGPAGNRKWGVCQAV*VKPSDI
Trigger: GATGTCACTTGGTTTTACTCAAACTGCCTGACAGAC...GCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp CAGATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAGACACATCTCTGTGTaGCTTCATCCAGGACCTGGG +
Preference number: 4 (lower is better)
Translates to: QISTTFNTPIHIGPAGNRRHISV*LHPGPG
Trigger: CCCAGGTCCTGGATGAAGTCACACAGAGATGTGTCT...TCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAATCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp ATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGTAGATGGCCTCCTTaGACAGAGCTACGTGGCTCC +
Preference number: 4 (lower is better)
Translates to: ISTTFNTPIHIGPAGNRKCRWPP*TELRGS
Trigger: GGAGCCACGTAGCTCTGTTCAAGGAGGCCATCTACA...CTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp ACTGTGTCTGGTTTCTTGTGTAGTCAAAAAGGCCAAGAGAATGGGCCACTGCATCCAGTACATGGACGGTaGGCATTTCATCTGGGCTCT +
Preference number: 4 (lower is better)
Translates to: TVSGFLCSQKGQENGPLHPVHGR*AFHLGS
Trigger: AGAGCCCAGATGAAATGCTCACCGTCCATGTACTGG...ATGCAGTGGCCCATTCTCTTGGCCTTTTTGACTACACAAGAAACCAGACACAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR TCA 90 bp TTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGATCAAAGGTTGTGAAGTaGATGTCACCAGTCACTGAG +
Preference number: 4 (lower is better)
Translates to: LIPPFTLGQLETESGAGRSKVVK*MSPVTE
Trigger: CTCAGTGACTGGTGACATTCACTTCACAACCTTTGA...TCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp CTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGGCCATCAAAGGTTGTaGAGTGAATGTCACCAGTCA +
Preference number: 4 (lower is better)
Translates to: LPPLIPPFTLGQLETESGGHQRL*SECHQS
Trigger: TGACTGGTGACATTCACTTCACAACCTTTGATGGCC...CCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp AGATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAATGCCATTGGGGAAGGTaGAGAGACAGGACACGTTCC +
Preference number: 4 (lower is better)
Translates to: RFLPPLIPPFTLGQLETECHWGR*RDRTRS
Trigger: GGAACGTGTCCTGTCTCTTCACCTTCCCCAATGGCA...TTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp TTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTCACACTCAGTCTCATTaGGCGGTGGGCAGCTTATGG +
Preference number: 4 (lower is better)
Translates to: FLPPLIPPFTLGQLETESHTQSH*AVGSLW
Trigger: CCATAAGCTGCCCACCGCTCAATGAGACTGAGTGTG...ACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp CCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTATCGGGCATAGGTGTTaGTGTTGTAGTTGTAGATGC +
Preference number: 4 (lower is better)
Translates to: PPLIPPFTLGQLETESGAIGHRC*CCSCRC
Trigger: GCATCTACAACTACAACATCAACACCTATGCCCGAT...AGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp ACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCATCGGGCATAGGTGTTaGTGTTGTAGTTGTAGATGC +
Preference number: 4 (lower is better)
Translates to: TTFNTPIHIGPAGNRKWGIGHRC*CCSCRC
Trigger: GCATCTACAACTACAACATCAACACCTATGCCCGAT...GCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp TCCATGCTCAACACGTGCCAGATTTCTACCACCTTTAATACCCCCATTCACATTAGTCACCACCCTGGCTaGAGCCACATGTGTCTGTCA +
Preference number: 4 (lower is better)
Translates to: SMLNTCQISTTFNTPIHISHHPG*SHMCLS
Trigger: TGACAGACACATGTGGCTGCAGCCAGGGTGGTGACT...AATGTGAATGGGGGTATTAAAGGTGGTAGAAATCTGGCACGTGTTGAGCATGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp TTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTTGTGGGAACCCAAACTaGTGGCTCCACACAGTCCTC +
Preference number: 4 (lower is better)
Translates to: FLPPLIPPFTLGQLETESCGNPN*WLHTVL
Trigger: GAGGACTGTGTGGAGCCAGCAGTTTGGGTTCCCACA...ACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp TTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGATATGACCTTAGTTACTaGAGGTGTCAGCACAGCCTT +
Preference number: 4 (lower is better)
Translates to: LIPPFTLGQLETESGAGRYDLSY*RCQHSL
Trigger: AAGGCTGTGCTGACACCTGCAGTAACTAAGGTCATA...TCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp TTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTCGCCTGGGTCATTGCTaGTGGAGTGAAAGGCAGTAC +
Preference number: 4 (lower is better)
Translates to: FLPPLIPPFTLGQLETESRLGHC*WSERQY
Trigger: GTACTGCCTTTCACTCCAGCAGCAATGACCCAGGCG...ACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp AGGCCTGAGTGTTGCAGGTATAGCCCTCTTTCCTTTTACTGTGTCTGGTTTCTTCCAGGTTGGCACTTTTaGAGTCCAGTACATGGACGG +
Preference number: 4 (lower is better)
Translates to: RPECCRYSPLSFYCVWFLPGWHF*SPVHGR
Trigger: CCGTCCATGTACTGGACTGCAAAAGTGCCAACCTGG...AAGAAACCAGACACAGTAAAAGGAAAGAGGGCTATACCTGCAACACTCAGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp AGATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAATGCTCCTGCCAGCTGTaGACAAACTCAACCACGTCG +
Preference number: 4 (lower is better)
Translates to: RFLPPLIPPFTLGQLETECSCQL*TNSTTS
Trigger: CGACGTGGTTGAGTTTGTGCACAGCTGGCAGGAGCA...TTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp ATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGAGTAGAGCCTCACACTaGTCGTACACGCCCTGCATG +
Preference number: 4 (lower is better)
Translates to: ISTTFNTPIHIGPAGNRKSRASH*SYTPCM
Trigger: CATGCAGGGCGTGTACGAGCAGTGTGAGGCTCTACT...CTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp CCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTTGCATGTGCAAGTATTaGAGTCTTCCTTCACCACAG +
Preference number: 4 (lower is better)
Translates to: PPLIPPFTLGQLETESGACMCKY*SLPSPQ
Trigger: CTGTGGTGAAGGAAGACTGCAATACTTGCACATGCA...AGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp ACAGGCTTAGGTCTTCCAAATCCTTTCCTGAATTACCATATCAATACCAGGACACTGGGCAGACAGCTGTaGTGCACTCCCACTTGCCTG +
Preference number: 4 (lower is better)
Translates to: TGLGLPNPFLNYHINTRTLGRQL*CTPTCL
Trigger: CAGGCAAGTGGGAGTGCAGCACAGCTGTCTGCCCAG...TGTCCTGGTATTGATATGGTAATTCAGGAAAGGATTTGGAAGACCTAAGCCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp ATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGCAGGTGCACTTTGCATaGCCCCACGAAGTCAAACGG +
Preference number: 4 (lower is better)
Translates to: ISTTFNTPIHIGPAGNRKQVHFA*PHEVKR
Trigger: CCGTTTGACTTCGTGGGGGCATGCAAAGTGCACCTG...CTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp ACAGGCTTAGGTCTTCCAAATCCTTTCCTGAATTACCATATCAATACCAGGACAGTCTGCGATCCAGGATaGCCCGGGCAAGAACAGGGA +
Preference number: 4 (lower is better)
Translates to: TGLGLPNPFLNYHINTRTVCDPG*PGQEQG
Trigger: TCCCTGTTCTTGCCCGGGGCATCCTGGATCGCAGAC...TGTCCTGGTATTGATATGGTAATTCAGGAAAGGATTTGGAAGACCTAAGCCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp ATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGCAGGGGTGCTGCTCCTaGATTCATTCTTGCGGATGG +
Preference number: 4 (lower is better)
Translates to: ISTTFNTPIHIGPAGNRKQGCCS*IHSCGW
Trigger: CCATCCGCAAGAATGAATGCAGGAGCAGCACCCCTG...CTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp ACTGTGTCTGGTTTCTTGTGTAGTCAAAAAGGCCAAGAGAATGGGCCACTGCATTGTTGTAGTTGTAGATaGTGGCGGATGGGCACCTCC +
Preference number: 4 (lower is better)
Translates to: TVSGFLCSQKGQENGPLHCCSCR*WRMGTS
Trigger: GGAGGTGCCCATCCGCCAGCATCTACAACTACAACA...ATGCAGTGGCCCATTCTCTTGGCCTTTTTGACTACACAAGAAACCAGACACAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp CAGATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGACAAGGAGACATCACCTaGTCCCCAGGGAAATACTCC +
Preference number: 4 (lower is better)
Translates to: QISTTFNTPIHIGPAGNRQGDIT*SPGKYS
Trigger: GGAGTATTTCCCTGGGGACCAGGTGATGTCTCCTTG...TCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAATCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp AGGCCTGAGTGTTGCAGGTATAGCCCTCTTTCCTTTTACTGTGTCTGGTTTCTTCGTGAAGGAAGAAGTTaGGTCTGTCTGCTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: RPECCRYSPLSFYCVWFLREGRS*VCLLPP
Trigger: TGGAGGCAGCAGACAGACCCAACTTCTTCCTTCACG...AAGAAACCAGACACAGTAAAAGGAAAGAGGGCTATACCTGCAACACTCAGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp ATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGCAGTTAGAGGGGTGCTaGGACTTGAAGCACTCTGGG +
Preference number: 4 (lower is better)
Translates to: ISTTFNTPIHIGPAGNRKQLEGC*DLKHSG
Trigger: CCCAGAGTGCTTCAAGTCCCAGCACCCCTCTAACTG...CTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp TCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGTTGGAACACAGGTGGTaGATGTATTGGCCTCAGTGG +
Preference number: 4 (lower is better)
Translates to: STTFNTPIHIGPAGNRKWLEHRW*MYWPQW
Trigger: CCACTGAGGCCAATACATCCACCACCTGTGTTCCAA...CCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp ACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTTGCAGTCCAGTACATaGACGGTGAGCATTTCATCT +
Preference number: 4 (lower is better)
Translates to: TTFNTPIHIGPAGNRKWGLQSST*TVSISS
Trigger: AGATGAAATGCTCACCGTCCATGTACTGGACTGCAA...GCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp AGGCCTGAGTGTTGCAGGTATAGCCCTCTTTCCTTTTACTGTGTCTGGTTTCTTCTTGACATTCGGGGATaGAGTCTGGACAGTCACCAC +
Preference number: 4 (lower is better)
Translates to: RPECCRYSPLSFYCVWFLLDIRG*SLDSHH
Trigger: GTGGTGACTGTCCAGACTCCATCCCCGAATGTCAAG...AAGAAACCAGACACAGTAAAAGGAAAGAGGGCTATACCTGCAACACTCAGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp TACAGGCTTAGGTCTTCCAAATCCTTTCCTGAATTACCATATCAATACCAGGACGCAGTCACAGAAGGCTaGGTGCACACACTCGCCTCC +
Preference number: 4 (lower is better)
Translates to: YRLRSSKSFPELPYQYQDAVTEG*VHTLAS
Trigger: GGAGGCGAGTGTGTGCACCCAGCCTTCTGTGACTGC...GTCCTGGTATTGATATGGTAATTCAGGAAAGGATTTGGAAGACCTAAGCCTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp CTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGTCACCAGATCATCCTTaGGGTCAGCATTGTTGTTCC +
Preference number: 4 (lower is better)
Translates to: LPPLIPPFTLGQLETESGSPDHP*GQHCCS
Trigger: GGAACAACAATGCTGACCCCAAGGATGATCTGGTGA...CCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp CCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCACATCACCCATTGATTaGCAGAGATCACTGGTACAA +
Preference number: 4 (lower is better)
Translates to: PLIPPFTLGQLETESGAGTSPID*QRSLVQ
Trigger: TTGTACCAGTGATCTCTGCCAATCAATGGGTGATGT...GCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp TCCATGCTCAACACGTGCCAGATTTCTACCACCTTTAATACCCCCATTCACATTGTGCCCGGCACCAGGTaGCTACATCACCCATTGATT +
Preference number: 4 (lower is better)
Translates to: SMLNTCQISTTFNTPIHIVPGTR*LHHPLI
Trigger: AATCAATGGGTGATGTAGCCACCTGGTGCCGGGCAC...AATGTGAATGGGGGTATTAAAGGTGGTAGAAATCTGGCACGTGTTGAGCATGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp TTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTCCGAAGAGCGGCTCTTaGCCAGGATGTACTGACATG +
Preference number: 4 (lower is better)
Translates to: FLPPLIPPFTLGQLETESPKSGS*PGCTDM
Trigger: CATGTCAGTACATCCTGGCCAAGAGCCGCTCTTCGG...ACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp ATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGCCTCCGAGGGTCCTaGTGCAGAATCACTGACACT +
Preference number: 4 (lower is better)
Translates to: ISTTFNTPIHIGPAGNRKCLRGS*CRITDT
Trigger: AGTGTCAGTGATTCTGCACCAGGACCCTCGGAGGCA...CTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp TTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGGATGATCTTGTACTaGTCAAACAGAAGGACATCC +
Preference number: 4 (lower is better)
Translates to: LIPPFTLGQLETESGAGRGMILY*SNRRTS
Trigger: GGATGTCCTTCTGTTTGACCAGTACAAGATCATCCC...TCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp AGATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAATGGAATGAGCCCCGCTaGCACACACAGGTATGGCAA +
Preference number: 4 (lower is better)
Translates to: RFLPPLIPPFTLGQLETEWNEPR*HTQVWQ
Trigger: TTGCCATACCTGTGTGTGCCAGCGGGGCTCATTCCA...TTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp ATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTCTCAAACACCTCACTaGGCAGGATGCTGCACTCCT +
Preference number: 4 (lower is better)
Translates to: ISTTFNTPIHIGPAGNRKSQTPH*AGCCTP
Trigger: AGGAGTGCAGCATCCTGCTCAGTGAGGTGTTTGAGA...CTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp TTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTCCAGTACATGGACGGTaGGCATTTCATCTGGGCTCT +
Preference number: 4 (lower is better)
Translates to: FLPPLIPPFTLGQLETESPVHGR*AFHLGS
Trigger: AGAGCCCAGATGAAATGCTCACCGTCCATGTACTGG...ACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp TACAGGCTTAGGTCTTCCAAATCCTTTCCTGAATTACCATATCAATACCAGGACTCTCCACGCTGTGCATaGACTCCTCATCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: YRLRSSKSFPELPYQYQDSPRCA*TPHPAG
Trigger: CCCAGCTGGATGAGGAGTTCATGCACAGCGTGGAGA...GTCCTGGTATTGATATGGTAATTCAGGAAAGGATTTGGAAGACCTAAGCCTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR TCA 90 bp CAGATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGATTCTGGTTACTCCTGTaGCCTCTTCCCACCATTCCA +
Preference number: 4 (lower is better)
Translates to: QISTTFNTPIHIGPAGNRFWLLL*PLPTIP
Trigger: TGGAATGGTGGGAAGAGGTCACAGGAGTAACCAGAA...TCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAATCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp ATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGCACAAGAGGGTGATGTaGTCCTGTGGGAAATGCACC +
Preference number: 4 (lower is better)
Translates to: ISTTFNTPIHIGPAGNRKHKRVM*SCGKCT
Trigger: GGTGCATTTCCCACAGGAGCACATCACCCTCTTGTG...CTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp TTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTAGCAAGAAGGAGGCATaGTGTTGGAAGGTGTCACGG +
Preference number: 4 (lower is better)
Translates to: FLPPLIPPFTLGQLETESSKKEA*CWKVSR
Trigger: CCGTGACACCTTCCAACAGCATGCCTCCTTCTTGCT...ACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp ATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGTGGGCCCACCCTCTaGAGAACCATACATGGAAGT +
Preference number: 4 (lower is better)
Translates to: ISTTFNTPIHIGPAGNRKCGPTL*RTIHGS
Trigger: ACTTCCATGTATGGTTCTGCAGAGGGTGGGCCCACA...CTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp TTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTTCTTGCGGATGGTCATaGGGATGGTCACCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: FLPPLIPPFTLGQLETESSCGWS*GWSPSC
Trigger: GCAAGAAGGTGACCATCCGCATGACCATCCGCAAGA...ACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp ATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGCACTGTGGTTCTCTaGTCCCACAAGAGGGTGATG +
Preference number: 4 (lower is better)
Translates to: ISTTFNTPIHIGPAGNRKCTVVL*SHKRVM
Trigger: CATCACCCTCTTGTGGGACCAGAGAACCACAGTGCA...CTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp CAGATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGATGCTGCACTCCTTCTTaGCAAATGGTTCTCGGAGAG +
Preference number: 4 (lower is better)
Translates to: QISTTFNTPIHIGPAGNRCCTPS*QMVLGE
Trigger: CTCTCCGAGAACCATTTGCCAAGAAGGAGTGCAGCA...TCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAATCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp AGATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAACCACATCTGGGTCATaGGCCTTGGCCTTGTACAGA +
Preference number: 4 (lower is better)
Translates to: RFLPPLIPPFTLGQLETETTSGS*ALALYR
Trigger: TCTGTACAAGGCCAAGGCCCATGACCCAGATGTGGT...TTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp AGGCCTGAGTGTTGCAGGTATAGCCCTCTTTCCTTTTACTGTGTCTGGTTTCTTTTGGAACACAGGTGGTaGATGTATTGGCCTCAGTGG +
Preference number: 4 (lower is better)
Translates to: RPECCRYSPLSFYCVWFLLEHRW*MYWPQW
Trigger: CCACTGAGGCCAATACATCCACCACCTGTGTTCCAA...AAGAAACCAGACACAGTAAAAGGAAAGAGGGCTATACCTGCAACACTCAGGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp ATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGATGAGTCCTGAGCTGTaGAGCCACTGGATCTGGATG +
Preference number: 4 (lower is better)
Translates to: ISTTFNTPIHIGPAGNRKMSPEL*SHWIWM
Trigger: CATCCAGATCCAGTGGCTCCACAGCTCAGGACTCAT...CTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp TCCATGCTCAACACGTGCCAGATTTCTACCACCTTTAATACCCCCATTCACATTCCTAGTATCCCATCCTaGCATGTCTTGGGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: SMLNTCQISTTFNTPIHIPSIPS*HVLGGS
Trigger: TGAGCCACCCAAGACATGCCAGGATGGGATACTAGG...AATGTGAATGGGGGTATTAAAGGTGGTAGAAATCTGGCACGTGTTGAGCATGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp ATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGCCTAGTATCCCATCCTaGCATGTCTTGGGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: ISTTFNTPIHIGPAGNRKPSIPS*HVLGGS
Trigger: TGAGCCACCCAAGACATGCCAGGATGGGATACTAGG...CTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp ACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCACATCACCCATTGATTaGCAGAGATCACTGGTACAA +
Preference number: 4 (lower is better)
Translates to: TTFNTPIHIGPAGNRKWGTSPID*QRSLVQ
Trigger: TTGTACCAGTGATCTCTGCCAATCAATGGGTGATGT...GCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp TCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGATTGCCAAAAAGTTGTaGGGTGCTCTCAGGTACACC +
Preference number: 4 (lower is better)
Translates to: STTFNTPIHIGPAGNRKWIAKKL*GALRYT
Trigger: GGTGTACCTGAGAGCACCCCACAACTTTTTGGCAAT...CCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp AGATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAATATAGGGCACCCAGGTaGCATTGGTGGCACAGAAGA +
Preference number: 4 (lower is better)
Translates to: RFLPPLIPPFTLGQLETEYRAPR*HWWHRR
Trigger: TCTTCTGTGCCACCAATGCCACCTGGGTGCCCTATA...TTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp CAGATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGACTGTGTATGGCGGGATaGTCTTGTACTGGTCAAACA +
Preference number: 4 (lower is better)
Translates to: QISTTFNTPIHIGPAGNRLCMAG*SCTGQT
Trigger: TGTTTGACCAGTACAAGATCATCCCGCCATACACAG...TCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAATCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp ACAGGCTTAGGTCTTCCAAATCCTTTCCTGAATTACCATATCAATACCAGGACAGTCTGGGCACTCAACTaGAGCCCAACTGCTGCCAAA +
Preference number: 4 (lower is better)
Translates to: TGLGLPNPFLNYHINTRTVWALN*SPTAAK
Trigger: TTTGGCAGCAGTTGGGCTGCAGTTGAGTGCCCAGAC...TGTCCTGGTATTGATATGGTAATTCAGGAAAGGATTTGGAAGACCTAAGCCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp AGATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAACCCACTTGCCTGAGGTaGATGTGCAAGTATTGCAGT +
Preference number: 4 (lower is better)
Translates to: RFLPPLIPPFTLGQLETEPTCLR*MCKYCS
Trigger: ACTGCAATACTTGCACATGCACCTCAGGCAAGTGGG...TTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp TACAGGCTTAGGTCTTCCAAATCCTTTCCTGAATTACCATATCAATACCAGGACCAGGTGCACTTTGCATaGCCCCACGAAGTCAAACGG +
Preference number: 4 (lower is better)
Translates to: YRLRSSKSFPELPYQYQDQVHFA*PHEVKR
Trigger: CCGTTTGACTTCGTGGGGGCATGCAAAGTGCACCTG...GTCCTGGTATTGATATGGTAATTCAGGAAAGGATTTGGAAGACCTAAGCCTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp ATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGCTTCGCCCTTCTCTGTaGATAGCACTATCTCCAAGC +
Preference number: 4 (lower is better)
Translates to: ISTTFNTPIHIGPAGNRKLRPSL*IALSPS
Trigger: GCTTGGAGATAGTGCTATCCACAGAGAAGGGCGAAG...CTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp TACAGGCTTAGGTCTTCCAAATCCTTTCCTGAATTACCATATCAATACCAGGACAGGCCACACTGCACTTaGGGACAGCGGAAGTTCTCA +
Preference number: 4 (lower is better)
Translates to: YRLRSSKSFPELPYQYQDRPHCT*GQRKFS
Trigger: TGAGAACTTCCGCTGTCCCCAAGTGCAGTGTGGCCT...GTCCTGGTATTGATATGGTAATTCAGGAAAGGATTTGGAAGACCTAAGCCTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp TACAGGCTTAGGTCTTCCAAATCCTTTCCTGAATTACCATATCAATACCAGGACTGGAATGAGCCCCGCTaGCACACACAGGTATGGCAA +
Preference number: 4 (lower is better)
Translates to: YRLRSSKSFPELPYQYQDWNEPR*HTQVWQ
Trigger: TTGCCATACCTGTGTGTGCCAGCGGGGCTCATTCCA...GTCCTGGTATTGATATGGTAATTCAGGAAAGGATTTGGAAGACCTAAGCCTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp ACAGGCTTAGGTCTTCCAAATCCTTTCCTGAATTACCATATCAATACCAGGACACACAGAGACTGGCACTaGCTGAGCCACACAACCCAT +
Preference number: 4 (lower is better)
Translates to: TGLGLPNPFLNYHINTRTHRDWH*LSHTTH
Trigger: ATGGGTTGTGTGGCTCAGCCAGTGCCAGTCTCTGTG...TGTCCTGGTATTGATATGGTAATTCAGGAAAGGATTTGGAAGACCTAAGCCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp TACAGGCTTAGGTCTTCCAAATCCTTTCCTGAATTACCATATCAATACCAGGACCATGTGTGGACCTCCTaGTTGTCATCCAGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: YRLRSSKSFPELPYQYQDHVWTS*LSSRKL
Trigger: GAGCTTCCTGGATGACAAGCAGGAGGTCCACACATG...GTCCTGGTATTGATATGGTAATTCAGGAAAGGATTTGGAAGACCTAAGCCTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp CAGATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGATATGACCTTAGTTACTaGAGGTGTCAGCACAGCCTT +
Preference number: 4 (lower is better)
Translates to: QISTTFNTPIHIGPAGNRYDLSY*RCQHSL
Trigger: AAGGCTGTGCTGACACCTGCAGTAACTAAGGTCATA...TCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAATCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR GCA 90 bp ACAGGCTTAGGTCTTCCAAATCCTTTCCTGAATTACCATATCAATACCAGGACACCACAGTTAGAGGGGTaGTGGGACTTGAAGCACTCT +
Preference number: 4 (lower is better)
Translates to: TGLGLPNPFLNYHINTRTPQLEG*WDLKHS
Trigger: AGAGTGCTTCAAGTCCCAGCACCCCTCTAACTGTGG...TGTCCTGGTATTGATATGGTAATTCAGGAAAGGATTTGGAAGACCTAAGCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp TTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTCTCCTTCTTGGCAAATaGTTCTCGGAGAGGATTCAG +
Preference number: 4 (lower is better)
Translates to: FLPPLIPPFTLGQLETESLLLGK*FSERIQ
Trigger: CTGAATCCTCTCCGAGAACCATTTGCCAAGAAGGAG...ACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp ATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGCTGCAGAACCATACATaGAAGTGGGCAGAGACACTT +
Preference number: 4 (lower is better)
Translates to: ISTTFNTPIHIGPAGNRKLQNHT*KWAETL
Trigger: AAGTGTCTCTGCCCACTTCCATGTATGGTTCTGCAG...CTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CCA 90 bp ACAGGCTTAGGTCTTCCAAATCCTTTCCTGAATTACCATATCAATACCAGGACAATGAGTCCTGAGCTGTaGAGCCACTGGATCTGGATG +
Preference number: 4 (lower is better)
Translates to: TGLGLPNPFLNYHINTRTMSPEL*SHWIWM
Trigger: CATCCAGATCCAGTGGCTCCACAGCTCAGGACTCAT...TGTCCTGGTATTGATATGGTAATTCAGGAAAGGATTTGGAAGACCTAAGCCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp ATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGGGCATCATCTGTGTATaGCGGGATGATCTTGTACTG +
Preference number: 4 (lower is better)
Translates to: ISTTFNTPIHIGPAGNRKGIICV*RDDLVL
Trigger: CAGTACAAGATCATCCCGCCATACACAGATGATGCC...CTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp ACAGGCTTAGGTCTTCCAAATCCTTTCCTGAATTACCATATCAATACCAGGACATGCTATCACAGCTCATaGCTCCATCTTTGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: TGLGLPNPFLNYHINTRTCYHSS*LHLCSG
Trigger: GCCACTGCAAAGATGGAGTCATGAGCTGTGATAGCA...TGTCCTGGTATTGATATGGTAATTCAGGAAAGGATTTGGAAGACCTAAGCCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp TACAGGCTTAGGTCTTCCAAATCCTTTCCTGAATTACCATATCAATACCAGGACCCCACTTGCCTGAGGTaGATGTGCAAGTATTGCAGT +
Preference number: 4 (lower is better)
Translates to: YRLRSSKSFPELPYQYQDPTCLR*MCKYCS
Trigger: ACTGCAATACTTGCACATGCACCTCAGGCAAGTGGG...GTCCTGGTATTGATATGGTAATTCAGGAAAGGATTTGGAAGACCTAAGCCTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp TTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTTTGCAGTCCAGTACATaGACGGTGAGCATTTCATCT +
Preference number: 4 (lower is better)
Translates to: FLPPLIPPFTLGQLETESLQSST*TVSISS
Trigger: AGATGAAATGCTCACCGTCCATGTACTGGACTGCAA...ACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp TCCATGCTCAACACGTGCCAGATTTCTACCACCTTTAATACCCCCATTCACATTATCAAAGACAATGAGTaGGTTCCCAACGTTGATGGA +
Preference number: 4 (lower is better)
Translates to: SMLNTCQISTTFNTPIHIIKDNE*VPNVDG
Trigger: TCCATCAACGTTGGGAACTCACTCATTGTCTTTGAT...AATGTGAATGGGGGTATTAAAGGTGGTAGAAATCTGGCACGTGTTGAGCATGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR TCA 90 bp CAGATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAGGGTCCTCATCTCATTaGTGGTTTTTAAGTCAAAGT +
Preference number: 4 (lower is better)
Translates to: QISTTFNTPIHIGPAGNRGSSSH*WFLSQS
Trigger: ACTTTGACTTAAAAACCATCAATGAGATGAGGACCC...TCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAATCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR TCA 90 bp ACAGGCTTAGGTCTTCCAAATCCTTTCCTGAATTACCATATCAATACCAGGACATTGAGTAAAACCAAGTaGCATCAACCACAGGGTGGC +
Preference number: 4 (lower is better)
Translates to: TGLGLPNPFLNYHINTRTLSKTK*HQPQGG
Trigger: GCCACCCTGTGGTTGATGTCACTTGGTTTTACTCAA...TGTCCTGGTATTGATATGGTAATTCAGGAAAGGATTTGGAAGACCTAAGCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR TCA 90 bp TACAGGCTTAGGTCTTCCAAATCCTTTCCTGAATTACCATATCAATACCAGGACGGCCATCAAAGGTTGTaGAGTGAATGTCACCAGTCA +
Preference number: 4 (lower is better)
Translates to: YRLRSSKSFPELPYQYQDGHQRL*SECHQS
Trigger: TGACTGGTGACATTCACTTCACAACCTTTGATGGCC...GTCCTGGTATTGATATGGTAATTCAGGAAAGGATTTGGAAGACCTAAGCCTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR TCA 90 bp TACAGGCTTAGGTCTTCCAAATCCTTTCCTGAATTACCATATCAATACCAGGACCTGTGTATGGCGGGATaGTCTTGTACTGGTCAAACA +
Preference number: 4 (lower is better)
Translates to: YRLRSSKSFPELPYQYQDLCMAG*SCTGQT
Trigger: TGTTTGACCAGTACAAGATCATCCCGCCATACACAG...GTCCTGGTATTGATATGGTAATTCAGGAAAGGATTTGGAAGACCTAAGCCTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR GCA 90 bp TACAGGCTTAGGTCTTCCAAATCCTTTCCTGAATTACCATATCAATACCAGGACGATGTTAGGGCTTCCTaGAAAGATCACAGTCACCCT +
Preference number: 4 (lower is better)
Translates to: YRLRSSKSFPELPYQYQDDVRAS*KDHSHP
Trigger: AGGGTGACTGTGATCTTTGCAGGAAGCCCTAACATC...GTCCTGGTATTGATATGGTAATTCAGGAAAGGATTTGGAAGACCTAAGCCTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp ACAGGCTTAGGTCTTCCAAATCCTTTCCTGAATTACCATATCAATACCAGGACACTCCTTCTTGGCAAATaGTTCTCGGAGAGGATTCAG +
Preference number: 4 (lower is better)
Translates to: TGLGLPNPFLNYHINTRTLLLGK*FSERIQ
Trigger: CTGAATCCTCTCCGAGAACCATTTGCCAAGAAGGAG...TGTCCTGGTATTGATATGGTAATTCAGGAAAGGATTTGGAAGACCTAAGCCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CCA 90 bp ACAGGCTTAGGTCTTCCAAATCCTTTCCTGAATTACCATATCAATACCAGGACAAACCATACATGGAAGTaGGCAGAGACACTTGCTTGG +
Preference number: 4 (lower is better)
Translates to: TGLGLPNPFLNYHINTRTNHTWK*AETLAW
Trigger: CCAAGCAAGTGTCTCTGCCCACTTCCATGTATGGTT...TGTCCTGGTATTGATATGGTAATTCAGGAAAGGATTTGGAAGACCTAAGCCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS GCA 90 bp CGAGCCCCCGACCTCCCTGAGTCCACAACCCTCTCACCGAGGCGCTaGACCCGCAGGGACTCGGCTGCCTGCTCACCCCAGGGCAGCCAG +
Preference number: 5 (lower is better)
Translates to: RAPDLPESTTLSPRR*TRRDSAACSPQGSQ
Trigger: CTGGCTGCCCTGGGGTGAGCAGGCAGCCGAGTCCCTGCGGGTGCAGCGCCTCGGTGAGAGGGTTGTGGACTCAGGGAGGTCGGGGGCTCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS CCA 90 bp CATTGCCGGAGCTGGGTCCTCCAGCCTTGCAAGGGCCGCCCTGCCTaGGCACACGCCCGGGCATACTCCGCCAGTGCCCGGCACCAGGTG +
Preference number: 5 (lower is better)
Translates to: HCRSWVLQPCKGRPA*AHARAYSASARHQV
Trigger: CACCTGGTGCCGGGCACTGGCGGAGTATGCCCGGGCGTGTGCCCAGGCAGGGCGGCCCTTGCAAGGCTGGAGGACCCAGCTCCGGCAATG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399391.7
ENST00000399397.6
ENST00000498332.5
CDS GCA 90 bp AGTGCATTGCCGGAGCTGGGTCCTCCAGCCTTGCAAGGGCCGCCCTaGCTGGGCACACGCCCGGGCATACTCCGCCAGTGCCCGGCACCA +
Preference number: 5 (lower is better)
Translates to: SALPELGPPALQGPP*LGTRPGILRQCPAP
Trigger: TGGTGCCGGGCACTGGCGGAGTATGCCCGGGCGTGTGCCCAGGCAGGGCGGCCCTTGCAAGGCTGGAGGACCCAGCTCCGGCAATGCACT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399391.7
ENST00000399397.6
ENST00000498332.5
CDS GCA 90 bp GGCAGCTTATGGGAGAGCGGACCAGCACGGCACCCAGGGGCGTGCTaGTGCAGTGGTGGCGGGCGCAGTCTGCGATCCAGGATGCCCCGG +
Preference number: 5 (lower is better)
Translates to: GSLWESGPARHPGAC*CSGGGRSLRSRMPR
Trigger: CCGGGGCATCCTGGATCGCAGACTGCGCCCGCCACCACTGCAGCAGCACGCCCCTGGGTGCCGTGCTGGTCCGCTCTCCCATAAGCTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS TCA 90 bp GCAGACGCCAGGACTCCCATAGGGACACGAGGGGACCGGAGGACTTaGGCGCAGGGCCAGCCTCCCGAGGTGCCTCCCCGGGCTAAGGCA +
Preference number: 5 (lower is better)
Translates to: ADARTPIGTRGDRRT*AQGQPPEVPPRAKA
Trigger: TGCCTTAGCCCGGGGAGGCACCTCGGGAGGCTGGCCCTGCGCTCAAGTCCTCCGGTCCCCTCGTGTCCCTATGGGAGTCCTGGCGTCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399397.6
CDS GCA 90 bp AGCTTATGGGAGAGCGGACCAGCACGGCACCCAGGGGCGTGCTGCTaGAGTGGTGGCGGGCGCAGTCTGCGATCCAGGATGCCCCGGGCA +
Preference number: 5 (lower is better)
Translates to: SLWESGPARHPGACC*SGGGRSLRSRMPRA
Trigger: TGCCCGGGGCATCCTGGATCGCAGACTGCGCCCGCCACCACTGCAGCAGCACGCCCCTGGGTGCCGTGCTGGTCCGCTCTCCCATAAGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS GCA 90 bp GTGGGCAGCTTATGGGAGAGCGGACCAGCACGGCACCCAGGGGCGTaGTGCTGCAGTGGTGGCGGGCGCAGTCTGCGATCCAGGATGCCC +
Preference number: 5 (lower is better)
Translates to: VGSLWESGPARHPGA*CCSGGGRSLRSRMP
Trigger: GGGCATCCTGGATCGCAGACTGCGCCCGCCACCACTGCAGCAGCACGCCCCTGGGTGCCGTGCTGGTCCGCTCTCCCATAAGCTGCCCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS CCA 90 bp GGCAGCTGGCTGCCCGTGGGTCCCGGCAGGTTTGGAAGCAGGGGCTaGCACAGGCATCGTAGCGCCACTCGCAGATGGGGTAGGCAGCCC +
Preference number: 5 (lower is better)
Translates to: GSWLPVGPGRFGSRG*HRHRSATRRWGRQP
Trigger: GGGCTGCCTACCCCATCTGCGAGTGGCGCTACGATGCCTGTGCCAGCCCCTGCTTCCAAACCTGCCGGGACCCACGGGCAGCCAGCTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS CCA 90 bp ATGGGAGAGCGGACCAGCACGGCACCCAGGGGCGTGCTGCTGCAGTaGTGGCGGGCGCAGTCTGCGATCCAGGATGCCCCGGGCAAGAAC +
Preference number: 5 (lower is better)
Translates to: MGERTSTAPRGVLLQ*WRAQSAIQDAPGKN
Trigger: GTTCTTGCCCGGGGCATCCTGGATCGCAGACTGCGCCCGCCACCACTGCAGCAGCACGCCCCTGGGTGCCGTGCTGGTCCGCTCTCCCAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS GCA 90 bp TCCTTGCAGTGCACAGTGCATTGCCGGAGCTGGGTCCTCCAGCCTTaGAAGGGCCGCCCTGCCTGGGCACACGCCCGGGCATACTCCGCC +
Preference number: 5 (lower is better)
Translates to: SLQCTVHCRSWVLQP*KGRPAWAHARAYSA
Trigger: GGCGGAGTATGCCCGGGCGTGTGCCCAGGCAGGGCGGCCCTTGCAAGGCTGGAGGACCCAGCTCCGGCAATGCACTGTGCACTGCAAGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399391.7
ENST00000399397.6
ENST00000498332.5
CDS CCA 90 bp CCTGCCTGGGCTCCCTCGGGCTCAGCCACCAAGGGCGTGAGAGGGTaGCTCGTAGCAGGCGTGAGCTCTGTGGGCCCACCCTCTGCAGAA +
Preference number: 5 (lower is better)
Translates to: PAWAPSGSATKGVRG*LVAGVSSVGPPSAE
Trigger: TTCTGCAGAGGGTGGGCCCACAGAGCTCACGCCTGCTACGAGCCACCCTCTCACGCCCTTGGTGGCTGAGCCCGAGGGAGCCCAGGCAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS CCA 90 bp CTACGATGCTCAGGGCTGGGGCTGAGCGCCCAGATGGTTCTGTGGTaGCCTCGTCCACCGGCTCTGCTGCCAGGTGAGGCCCTGCCGAGG +
Preference number: 5 (lower is better)
Translates to: LRCSGLGLSAQMVLW*PRPPALLPGEALPR
Trigger: CCTCGGCAGGGCCTCACCTGGCAGCAGAGCCGGTGGACGAGGCCACCACAGAACCATCTGGGCGCTCAGCCCCAGCCCTGAGCATCGTAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS CCA 90 bp CCTGGCAGGTACGTCCACACGGGGCCACGCAGGGGCTATACTCCTTaGAGGCCTCACAGGACAGTGCACAGGCTGGCAGGCGGGCGCGGA +
Preference number: 5 (lower is better)
Translates to: PGRYVHTGPRRGYTP*RPHRTVHRLAGGRG
Trigger: TCCGCGCCCGCCTGCCAGCCTGTGCACTGTCCTGTGAGGCCTCCAAGGAGTATAGCCCCTGCGTGGCCCCGTGTGGACGTACCTGCCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS TCA 90 bp CAGACCCTGGGGACAGGCGCAGCCCGAGAGGCAGGGGCCACGGGCTaGCACGCTCAGGTTCAGCAGTTGCTGCTCACACGTCCTCTCCCT +
Preference number: 5 (lower is better)
Translates to: QTLGTGAAREAGATG*HAQVQQLLLTRPLP
Trigger: AGGGAGAGGACGTGTGAGCAGCAACTGCTGAACCTGAGCGTGTCAGCCCGTGGCCCCTGCCTCTCGGGCTGCGCCTGTCCCCAGGGTCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS CCA 90 bp CCCAGATCCACCGGGACAATGGTGTCTGGGGCTTGGCACTGGTGCTaGCAGCAGCCGCTGAGGGAGCTGTTCCAGGTCTCCCCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: PRSTGTMVSGAWHWC*QQPLRELFQVSPRA
Trigger: GGCCCTGGGGGAGACCTGGAACAGCTCCCTCAGCGGCTGCTGCCAGCACCAGTGCCAAGCCCCAGACACCATTGTCCCGGTGGATCTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS CCA 90 bp GGGCAGCCCAGATCCACCGGGACAATGGTGTCTGGGGCTTGGCACTaGTGCTGGCAGCAGCCGCTGAGGGAGCTGTTCCAGGTCTCCCCC +
Preference number: 5 (lower is better)
Translates to: GQPRSTGTMVSGAWH*CWQQPLRELFQVSP
Trigger: GGGGGAGACCTGGAACAGCTCCCTCAGCGGCTGCTGCCAGCACCAGTGCCAAGCCCCAGACACCATTGTCCCGGTGGATCTGGGCTGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS CCA 90 bp AGGGCGGGGACTGGGGCAGCCCAGATCCACCGGGACAATGGTGTCTaGGGCTTGGCACTGGTGCTGGCAGCAGCCGCTGAGGGAGCTGTT +
Preference number: 5 (lower is better)
Translates to: RAGTGAAQIHRDNGV*GLALVLAAAAEGAV
Trigger: AACAGCTCCCTCAGCGGCTGCTGCCAGCACCAGTGCCAAGCCCCAGACACCATTGTCCCGGTGGATCTGGGCTGCCCCAGTCCCCGCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS CCA 90 bp CGGGAGGTGTGGCACACGCCATCTGCTGAGAGCTCCACCACTGTCTaGCCGGGCTGCATCACACCCAGCTCGCGGCTCAGACACACCGGG +
Preference number: 5 (lower is better)
Translates to: REVWHTPSAESSTTV*PGCITPSSRLRHTG
Trigger: CCCGGTGTGTCTGAGCCGCGAGCTGGGTGTGATGCAGCCCGGCCAGACAGTGGTGGAGCTCTCAGCAGATGGCGTGTGCCACACCTCCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS TCA 90 bp GCACGGGGCTCAGGAACGCAGAGCAGGGCGCAAACATCTCCCCCGTaGGCACGCTGCAGGCCTGCACTGAGTAGGAGGCGGCTTGCAGGT +
Preference number: 5 (lower is better)
Translates to: ARGSGTQSRAQTSPP*ARCRPALSRRRLAG
Trigger: ACCTGCAAGCCGCCTCCTACTCAGTGCAGGCCTGCAGCGTGCTCACGGGGGAGATGTTTGCGCCCTGCTCTGCGTTCCTGAGCCCCGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS TCA 90 bp GTCGAGCACGGTGGTGCAGCGGGAGGTGTGGCACACGCCATCTGCTaGGAGCTCCACCACTGTCTGGCCGGGCTGCATCACACCCAGCTC +
Preference number: 5 (lower is better)
Translates to: VEHGGAAGGVAHAIC*ELHHCLAGLHHTQL
Trigger: GAGCTGGGTGTGATGCAGCCCGGCCAGACAGTGGTGGAGCTCTCAGCAGATGGCGTGTGCCACACCTCCCGCTGCACCACCGTGCTCGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS GCA 90 bp CAGCCCAGATCCACCGGGACAATGGTGTCTGGGGCTTGGCACTGGTaGTGGCAGCAGCCGCTGAGGGAGCTGTTCCAGGTCTCCCCCAGG +
Preference number: 5 (lower is better)
Translates to: QPRSTGTMVSGAWHW*WQQPLRELFQVSPR
Trigger: CCTGGGGGAGACCTGGAACAGCTCCCTCAGCGGCTGCTGCCAGCACCAGTGCCAAGCCCCAGACACCATTGTCCCGGTGGATCTGGGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS CCA 90 bp GACACAGCCTTCTACCCTGGGTACGTCCCGGCAGCTGGCTGCCCGTaGGTCCCGGCAGGTTTGGAAGCAGGGGCTGGCACAGGCATCGTA +
Preference number: 5 (lower is better)
Translates to: DTAFYPGYVPAAGCP*VPAGLEAGAGTGIV
Trigger: TACGATGCCTGTGCCAGCCCCTGCTTCCAAACCTGCCGGGACCCACGGGCAGCCAGCTGCCGGGACGTACCCAGGGTAGAAGGCTGTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS CCA 90 bp GAGGGGAGTGGGTGTGGCTGTGGGGAGGCAGGCGAGCCCATGGGCTaGCTGTGCCCGGCTTCGCCCTTCTCTGTGGATAGCACTATCTCC +
Preference number: 5 (lower is better)
Translates to: EGSGCGCGEAGEPMG*LCPASPFSVDSTIS
Trigger: GGAGATAGTGCTATCCACAGAGAAGGGCGAAGCCGGGCACAGCCAGCCCATGGGCTCGCCTGCCTCCCCACAGCCACACCCACTCCCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS CCA 90 bp ACTTGGCCTCCGGGATGCAGAGTGCAGAGTGGCGCCGGTGTAAGATaGTGCCCTCGGAGCAGACGCAGCCCTCGCCCAGCACCTGGCAGT +
Preference number: 5 (lower is better)
Translates to: TWPPGCRVQSGAGVR*CPRSRRSPRPAPGS
Trigger: ACTGCCAGGTGCTGGGCGAGGGCTGCGTCTGCTCCGAGGGCACCATCTTACACCGGCGCCACTCTGCACTCTGCATCCCGGAGGCCAAGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS CCA 90 bp CAGTCACCACAGGCGCACTTGGCCTCCGGGATGCAGAGTGCAGAGTaGCGCCGGTGTAAGATGGTGCCCTCGGAGCAGACGCAGCCCTCG +
Preference number: 5 (lower is better)
Translates to: QSPQAHLASGMQSAE*RRCKMVPSEQTQPS
Trigger: CGAGGGCTGCGTCTGCTCCGAGGGCACCATCTTACACCGGCGCCACTCTGCACTCTGCATCCCGGAGGCCAAGTGCGCCTGTGGTGACTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342528.2
CDS CCA 90 bp CTGTCAGTGCAGGCGCACTTGGCCTCCGGGATGCAGAGTGCAGAGTaGCGCCGGTGTAAGATGGTGCCCTCGGAGCAGACGCAGCCCTCG +
Preference number: 5 (lower is better)
Translates to: LSVQAHLASGMQSAE*RRCKMVPSEQTQPS
Trigger: CGAGGGCTGCGTCTGCTCCGAGGGCACCATCTTACACCGGCGCCACTCTGCACTCTGCATCCCGGAGGCCAAGTGCGCCTGCACTGACAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS CCA 90 bp GGACTGGGGCAGCCCAGATCCACCGGGACAATGGTGTCTGGGGCTTaGCACTGGTGCTGGCAGCAGCCGCTGAGGGAGCTGTTCCAGGTC +
Preference number: 5 (lower is better)
Translates to: GLGQPRSTGTMVSGA*HWCWQQPLRELFQV
Trigger: GACCTGGAACAGCTCCCTCAGCGGCTGCTGCCAGCACCAGTGCCAAGCCCCAGACACCATTGTCCCGGTGGATCTGGGCTGCCCCAGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS TCA 90 bp TGCCAAAGCCTCCGCCAAACCCTCTACGATGCTCAGGGCTGGGGCTaGGCGCCCAGATGGTTCTGTGGTGGCCTCGTCCACCGGCTCTGC +
Preference number: 5 (lower is better)
Translates to: CQSLRQTLYDAQGWG*APRWFCGGLVHRLC
Trigger: GCAGAGCCGGTGGACGAGGCCACCACAGAACCATCTGGGCGCTCAGCCCCAGCCCTGAGCATCGTAGAGGGTTTGGCGGAGGCTTTGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS TCA 90 bp ATCCCACAGCGAGGGGGAGCAGCACCCTGGGGACAGTGCTGGGACTaGTTCACGCGAATCAGCTGGCCCTCCAGGCAGATGTGGCGGACG +
Preference number: 5 (lower is better)
Translates to: IPQRGGAAPWGQCWD*FTRISWPSRQMWRT
Trigger: CGTCCGCCACATCTGCCTGGAGGGCCAGCTGATTCGCGTGAATCAGTCCCAGCACTGTCCCCAGGGTGCTGCTCCCCCTCGCTGTGGGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS GCA 90 bp TTCTGTGGTGGCCTCGTCCACCGGCTCTGCTGCCAGGTGAGGCCCTaGCGAGGTTCCATGGGCCTCAGCCAGCTGAGGCAACAGAACCAG +
Preference number: 5 (lower is better)
Translates to: FCGGLVHRLCCQVRP*RGSMGLSQLRQQNQ
Trigger: CTGGTTCTGTTGCCTCAGCTGGCTGAGGCCCATGGAACCTCGGCAGGGCCTCACCTGGCAGCAGAGCCGGTGGACGAGGCCACCACAGAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS GCA 90 bp GCCGGTCCCCATAGGCAGTGCAGGTGGAGGCGCAAGGGTGCAGGGTaGACTGGAATGAGCCCCGCTGGCACACACAGGTATGGCAAGGAG +
Preference number: 5 (lower is better)
Translates to: AGPHRQCRWRRKGAG*TGMSPAGTHRYGKE
Trigger: CTCCTTGCCATACCTGTGTGTGCCAGCGGGGCTCATTCCAGTGCACCCTGCACCCTTGCGCCTCCACCTGCACTGCCTATGGGGACCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS CCA 90 bp CCTGCCTGCCGTGTCCCCCGGTGCAGCAAGAAGGAGGCATGCTGTTaGAAGGTGTCACGGCCCTGCCACTTAGCCAGCTCCAGAGACCCG +
Preference number: 5 (lower is better)
Translates to: PACRVPRCSKKEACC*KVSRPCHLASSRDP
Trigger: CGGGTCTCTGGAGCTGGCTAAGTGGCAGGGCCGTGACACCTTCCAACAGCATGCCTCCTTCTTGCTGCACCGGGGGACACGGCAGGCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS CCA 90 bp AGGTGCGGTTGGACACCATGCGAAGGCAGGGCGAGCAGTCAGTTGTaGCGCAGCTGTCTGGGCGGAAGCGGGTCTGGCCCACTGAGGTCA +
Preference number: 5 (lower is better)
Translates to: RCGWTPCEGRASSQL*RSCLGGSGSGPLRS
Trigger: TGACCTCAGTGGGCCAGACCCGCTTCCGCCCAGACAGCTGCGCCACAACTGACTGCTCGCCCTGCCTTCGCATGGTGTCCAACCGCACCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS CCA 90 bp GCCCATCAAACGTGCGGTAATGCCGGTCCCCATAGGCAGTGCAGGTaGAGGCGCAAGGGTGCAGGGTGCACTGGAATGAGCCCCGCTGGC +
Preference number: 5 (lower is better)
Translates to: AHQTCGNAGPHRQCR*RRKGAGCTGMSPAG
Trigger: GCCAGCGGGGCTCATTCCAGTGCACCCTGCACCCTTGCGCCTCCACCTGCACTGCCTATGGGGACCGGCATTACCGCACGTTTGATGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS CCA 90 bp GGCAGGCACAGTCGGTGGGCTCCTGCACTGTATAGGGCACCCAGGTaGCATTGGTGGCACAGAAGAGCTGCACAGAGCGCCGCTGCAGGC +
Preference number: 5 (lower is better)
Translates to: GRHSRWAPALYRAPR*HWWHRRAAQSAAAG
Trigger: GCCTGCAGCGGCGCTCTGTGCAGCTCTTCTGTGCCACCAATGCCACCTGGGTGCCCTATACAGTGCAGGAGCCCACCGACTGTGCCTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS CCA 90 bp CCCACGACTGTAGCCTTGTCCCCCATGGCAAGGGTCGCCTCCTGGTaGCTGCTGCTGGAGGAAACACGAGTCTGCGCGGGCCCATTCCTC +
Preference number: 5 (lower is better)
Translates to: PTTVALSPMARVASW*LLLEETRVCAGPFL
Trigger: GAGGAATGGGCCCGCGCAGACTCGTGTTTCCTCCAGCAGCAGCCACCAGGAGGCGACCCTTGCCATGGGGGACAAGGCTACAGTCGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS CCA 90 bp CCTCCCACGACTGTAGCCTTGTCCCCCATGGCAAGGGTCGCCTCCTaGTGGCTGCTGCTGGAGGAAACACGAGTCTGCGCGGGCCCATTC +
Preference number: 5 (lower is better)
Translates to: PPTTVALSPMARVAS*WLLLEETRVCAGPF
Trigger: GAATGGGCCCGCGCAGACTCGTGTTTCCTCCAGCAGCAGCCACCAGGAGGCGACCCTTGCCATGGGGGACAAGGCTACAGTCGTGGGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS GCA 90 bp ACCAGGCCTGCCTGCCGTGTCCCCCGGTGCAGCAAGAAGGAGGCATaGTGTTGGAAGGTGTCACGGCCCTGCCACTTAGCCAGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: TRPACRVPRCSKKEA*CWKVSRPCHLASSR
Trigger: TCTGGAGCTGGCTAAGTGGCAGGGCCGTGACACCTTCCAACAGCATGCCTCCTTCTTGCTGCACCGGGGGACACGGCAGGCAGGCCTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS GCA 90 bp AGTGGGTGTGGCTGTGGGGAGGCAGGCGAGCCCATGGGCTGGCTGTaGCCGGCTTCGCCCTTCTCTGTGGATAGCACTATCTCCAAGCTC +
Preference number: 5 (lower is better)
Translates to: SGCGCGEAGEPMGWL*PASPFSVDSTISKL
Trigger: GAGCTTGGAGATAGTGCTATCCACAGAGAAGGGCGAAGCCGGGCACAGCCAGCCCATGGGCTCGCCTGCCTCCCCACAGCCACACCCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS GCA 90 bp ATGGTGCCCTCGGAGCAGACGCAGCCCTCGCCCAGCACCTGGCAGTaGTCTGGGTCCAGAGGCCCTAGTATCCCATCCTGGCATGTCTTG +
Preference number: 5 (lower is better)
Translates to: MVPSEQTQPSPSTWQ*SGSRGPSIPSWHVL
Trigger: CAAGACATGCCAGGATGGGATACTAGGGCCTCTGGACCCAGAGCACTGCCAGGTGCTGGGCGAGGGCTGCGTCTGCTCCGAGGGCACCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS GCA 90 bp GCCCATCAAATGTCTCCACGTGGTGCTGCCCCCACGCCCGGCAAATaGTGTCCCTCTCAGGGCCGGCATTGTACACCATCTGGCAGCGCG +
Preference number: 5 (lower is better)
Translates to: AHQMSPRGAAPTPGK*CPSQGRHCTPSGSA
Trigger: CGCGCTGCCAGATGGTGTACAATGCCGGCCCTGAGAGGGACAGCATTTGCCGGGCGTGGGGGCAGCACCACGTGGAGACATTTGATGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399391.7
ENST00000399397.6
ENST00000428619.1
ENST00000498332.5
CDS GCA 90 bp GATAGGTGTCCGGTGGGCAGGCACAGCCCTCCACACACTCGTCTCTaGTCAGGTCATCGCCACCATCAACCCCACAGGCCTCAGGGCTGG +
Preference number: 5 (lower is better)
Translates to: DRCPVGRHSPPHTRL*SGHRHHQPHRPQGW
Trigger: CCAGCCCTGAGGCCTGTGGGGTTGATGGTGGCGATGACCTGAGCAGAGACGAGTGTGTGGAGGGCTGTGCCTGCCCACCGGACACCTATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS CCA 90 bp TTTGGAAGCAGGGGCTGGCACAGGCATCGTAGCGCCACTCGCAGATaGGGTAGGCAGCCCCCGAGGGCTTGGCATCCAGAAGGCGGAAGA +
Preference number: 5 (lower is better)
Translates to: FGSRGWHRHRSATRR*GRQPPRAWHPEGGR
Trigger: TCTTCCGCCTTCTGGATGCCAAGCCCTCGGGGGCTGCCTACCCCATCTGCGAGTGGCGCTACGATGCCTGTGCCAGCCCCTGCTTCCAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS CCA 90 bp ATGGTGCACACTTGGCCCGATGGAGCCGCCTTTCCCAGGAAGACATaGCCACGGAGTCTGGGGCTTCAGCCTGCTGGCCTCCCACGACTG +
Preference number: 5 (lower is better)
Translates to: MVHTWPDGAAFPRKT*PRSLGLQPAGLPRL
Trigger: CAGTCGTGGGAGGCCAGCAGGCTGAAGCCCCAGACTCCGTGGCCATGTCTTCCTGGGAAAGGCGGCTCCATCGGGCCAAGTGTGCACCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399391.7
ENST00000399397.6
ENST00000498332.5
CDS CCA 90 bp CCGGGGGACACAGAGGTCAGCCTGGGTGTCCAGATAGGTGTCCGGTaGGCAGGCACAGCCCTCCACACACTCGTCTCTGCTCAGGTCATC +
Preference number: 5 (lower is better)
Translates to: PGDTEVSLGVQIGVR*AGTALHTLVSAQVI
Trigger: GATGACCTGAGCAGAGACGAGTGTGTGGAGGGCTGTGCCTGCCCACCGGACACCTATCTGGACACCCAGGCTGACCTCTGTGTCCCCCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS CCA 90 bp CACAGTCGGTGGGCTCCTGCACTGTATAGGGCACCCAGGTGGCATTaGTGGCACAGAAGAGCTGCACAGAGCGCCGCTGCAGGCCCACCT +
Preference number: 5 (lower is better)
Translates to: HSRWAPALYRAPRWH*WHRRAAQSAAAGPP
Trigger: AGGTGGGCCTGCAGCGGCGCTCTGTGCAGCTCTTCTGTGCCACCAATGCCACCTGGGTGCCCTATACAGTGCAGGAGCCCACCGACTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS TCA 90 bp AGGATGCCCCGGGCAAGAACAGGGAGGTGGTGCCATTGGGGAAGGTaGAGAGACAGGACACGTTCCTGCAGGAGCCGCAGCAGGCAGCGA +
Preference number: 5 (lower is better)
Translates to: RMPRARTGRWCHWGR*RDRTRSCRSRSRQR
Trigger: TCGCTGCCTGCTGCGGCTCCTGCAGGAACGTGTCCTGTCTCTTCACCTTCCCCAATGGCACCACCTCCCTGTTCTTGCCCGGGGCATCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS CCA 90 bp TGGGCTAAGTGTCTGAGCAGGCAGAGTCGTGGCCTGTGGCTGGAGTaGAGTGGTGATGACAGAGGCTTTGGGGCCGGGTGTGGCCACTGG +
Preference number: 5 (lower is better)
Translates to: WAKCLSRQSRGLWLE*SGDDRGFGAGCGHW
Trigger: CCAGTGGCCACACCCGGCCCCAAAGCCTCTGTCATCACCACTCCACTCCAGCCACAGGCCACGACTCTGCCTGCTCAGACACTTAGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS CCA 90 bp CAGGCCTGGAGCTGTGCCTGCTGCTGGGGGTGCTATGTGAGTGGGTaGGTGCGCCTGGGTCATTGCTGCTGGAGTGAAAGGCAGTACTGG +
Preference number: 5 (lower is better)
Translates to: QAWSCACCWGCYVSG*VRLGHCCWSERQYW
Trigger: CCAGTACTGCCTTTCACTCCAGCAGCAATGACCCAGGCGCACCCACCCACTCACATAGCACCCCCAGCAGCAGGCACAGCTCCAGGCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS CCA 90 bp TACCACGGAACCCCCAACCTTGGCACACTCAGTCTCATTGAGCGGTaGGCAGCTTATGGGAGAGCGGACCAGCACGGCACCCAGGGGCGT +
Preference number: 5 (lower is better)
Translates to: YHGTPNLGTLSLIER*AAYGRADQHGTQGR
Trigger: ACGCCCCTGGGTGCCGTGCTGGTCCGCTCTCCCATAAGCTGCCCACCGCTCAATGAGACTGAGTGTGCCAAGGTTGGGGGTTCCGTGGTA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS TCA 90 bp CAGGGCCGGCATTGTACACCATCTGGCAGCGCGGTCCAGTGGCATTaGAGCGTCTGCAGTCACAGAAGGCTGGGTGCACACACTCGCCTC +
Preference number: 5 (lower is better)
Translates to: QGRHCTPSGSAVQWH*SVCSHRRLGAHTRL
Trigger: GAGGCGAGTGTGTGCACCCAGCCTTCTGTGACTGCAGACGCTTCAATGCCACTGGACCGCGCTGCCAGATGGTGTACAATGCCGGCCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399391.7
ENST00000399397.6
ENST00000428619.1
ENST00000498332.5
CDS GCA 90 bp GTTGTGGGCCCTGGAGGCTGGTTAGGGGCCTGCTCCTGCCAGCTGTaGACAAACTCAACCACGTCGTCAGTCAGCTTCCCAGAGCTGGTC +
Preference number: 5 (lower is better)
Translates to: VVGPGGWLGACSCQL*TNSTTSSVSFPELV
Trigger: GACCAGCTCTGGGAAGCTGACTGACGACGTGGTTGAGTTTGTGCACAGCTGGCAGGAGCAGGCCCCTAACCAGCCTCCAGGGCCCACAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399391.7
ENST00000399397.6
ENST00000498332.5
CDS GCA 90 bp GCCCGTGATCAGGATCTGGTCCTGTCGGCAGCTGGGGACCAGCTCTaGCTCACAGAGATCTGGGTCACACTCACAGCTGTAGCTGGGGCA +
Preference number: 5 (lower is better)
Translates to: ARDQDLVLSAAGDQL*LTEIWVTLTAVAGA
Trigger: TGCCCCAGCTACAGCTGTGAGTGTGACCCAGATCTCTGTGAGGCAGAGCTGGTCCCCAGCTGCCGACAGGACCAGATCCTGATCACGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS CCA 90 bp GGAAGCCACAGGTCTGGAGGAGGGACTTGCTGTCAAGGAGGGCTGTaGGGGTGTCGTCCTAACAGGCAAGGAGCCATGGCCTCGGACTGT +
Preference number: 5 (lower is better)
Translates to: GSHRSGGGTCCQGGL*GCRPNRQGAMASDC
Trigger: ACAGTCCGAGGCCATGGCTCCTTGCCTGTTAGGACGACACCCCCACAGCCCTCCTTGACAGCAAGTCCCTCCTCCAGACCTGTGGCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS CCA 90 bp GGGTGGGTGCGCCTGGGTCATTGCTGCTGGAGTGAAAGGCAGTACTaGGCTAAGTGTCTGAGCAGGCAGAGTCGTGGCCTGTGGCTGGAG +
Preference number: 5 (lower is better)
Translates to: GWVRLGHCCWSERQY*AKCLSRQSRGLWLE
Trigger: CTCCAGCCACAGGCCACGACTCTGCCTGCTCAGACACTTAGCCCAGTACTGCCTTTCACTCCAGCAGCAATGACCCAGGCGCACCCACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS CCA 90 bp GGCATGTCTTGGGTGGCTCACAGGCTGTCACACATGCCTGGTATGTaGAGTCGCTGGAGCACAGGAAGGGGCAGTAGTCAGAGCGCCGCC +
Preference number: 5 (lower is better)
Translates to: GMSWVAHRLSHMPGM*SRWSTGRGSSQSAA
Trigger: GGCGGCGCTCTGACTACTGCCCCTTCCTGTGCTCCAGCGACTCCACATACCAGGCATGTGTGACAGCCTGTGAGCCACCCAAGACATGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS CCA 90 bp GCCAGGTGGGTACAGAGTCCCGTGAAACTCACAGGGACACTCAGCTaGTGCCACGCAGCCCCCATCCTCGAAGATGAGCCCATTGGGGCA +
Preference number: 5 (lower is better)
Translates to: ARWVQSPVKLTGTLS*CHAAPILEDEPIGA
Trigger: TGCCCCAATGGGCTCATCTTCGAGGATGGGGGCTGCGTGGCACCAGCTGAGTGTCCCTGTGAGTTTCACGGGACTCTGTACCCACCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399391.7
ENST00000399397.6
ENST00000498332.5
CDS TCA 90 bp TCCTGTGACAGCTGTGGCTCCTCATCACTGGGAGTGGGCAACCCTTaGCTGGGAGGGAGGGTCTCATTGCCAAGGGCCTCTGTGGGAACC +
Preference number: 5 (lower is better)
Translates to: SCDSCGSSSLGVGNP*LGGRVSLPRASVGT
Trigger: GGTTCCCACAGAGGCCCTTGGCAATGAGACCCTCCCTCCCAGTCAAGGGTTGCCCACTCCCAGTGATGAGGAGCCACAGCTGTCACAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS TCA 90 bp GGCCATGGCCCTGGGCCTTGCTGGTTTTGCTGGCCTCCACGATCATaGGTCCTGAGCTGTGGAGCCACTGGATCTGGATGTCTGAGGGAG +
Preference number: 5 (lower is better)
Translates to: GHGPGPCWFCWPPRS*VLSCGATGSGCLRE
Trigger: CTCCCTCAGACATCCAGATCCAGTGGCTCCACAGCTCAGGACTCATGATCGTGGAGGCCAGCAAAACCAGCAAGGCCCAGGGCCATGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS TCA 90 bp GTCACGGTGAAGGTGCCCGAAGAGCGGCTCTTGGCCAGGATGTACTaGCATGTGGCGGGGAACGTGTACCGGCGGCCATCAAAGGTTGTG +
Preference number: 5 (lower is better)
Translates to: VTVKVPEERLLARMY*HVAGNVYRRPSKVV
Trigger: CACAACCTTTGATGGCCGCCGGTACACGTTCCCCGCCACATGTCAGTACATCCTGGCCAAGAGCCGCTCTTCGGGCACCTTCACCGTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399391.7
ENST00000399397.6
ENST00000498332.5
CDS TCA 90 bp CCTCATTCCTTTAACGTTTCTCATTCCTCGAGCCCCCGACCTCCCTaGGTCCACAACCCTCTCACCGAGGCGCTGCACCCGCAGGGACTC +
Preference number: 5 (lower is better)
Translates to: PHSFNVSHSSSPRPP*VHNPLTEALHPQGL
Trigger: GAGTCCCTGCGGGTGCAGCGCCTCGGTGAGAGGGTTGTGGACTCAGGGAGGTCGGGGGCTCGAGGAATGAGAAACGTTAAAGGAATGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS GCA 90 bp AGGGAGGAAGTTGTGGGCCCTGGAGGCTGGTTAGGGGCCTGCTCCTaGCAGCTGTGCACAAACTCAACCACGTCGTCAGTCAGCTTCCCA +
Preference number: 5 (lower is better)
Translates to: REEVVGPGGWLGACS*QLCTNSTTSSVSFP
Trigger: TGGGAAGCTGACTGACGACGTGGTTGAGTTTGTGCACAGCTGGCAGGAGCAGGCCCCTAACCAGCCTCCAGGGCCCACAACTTCCTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399391.7
ENST00000399397.6
ENST00000498332.5
CDS GCA 90 bp GCACTTTGCATGCCCCCACGAAGTCAAACGGGAGCCCATCAAACGTaGGGTAATGCCGGTCCCCATAGGCAGTGCAGGTGGAGGCGCAAG +
Preference number: 5 (lower is better)
Translates to: ALCMPPRSQTGAHQT*GNAGPHRQCRWRRK
Trigger: CTTGCGCCTCCACCTGCACTGCCTATGGGGACCGGCATTACCGCACGTTTGATGGGCTCCCGTTTGACTTCGTGGGGGCATGCAAAGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS CCA 90 bp TCCTGGGGCTTTCCTGTGACAGCTGTGGCTCCTCATCACTGGGAGTaGGCAACCCTTGACTGGGAGGGAGGGTCTCATTGCCAAGGGCCT +
Preference number: 5 (lower is better)
Translates to: SWGFPVTAVAPHHWE*ATLDWEGGSHCQGP
Trigger: AGGCCCTTGGCAATGAGACCCTCCCTCCCAGTCAAGGGTTGCCCACTCCCAGTGATGAGGAGCCACAGCTGTCACAGGAAAGCCCCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS CCA 90 bp TGGGGGTCCTGGGGCTTTCCTGTGACAGCTGTGGCTCCTCATCACTaGGAGTGGGCAACCCTTGACTGGGAGGGAGGGTCTCATTGCCAA +
Preference number: 5 (lower is better)
Translates to: WGSWGFPVTAVAPHH*EWATLDWEGGSHCQ
Trigger: TTGGCAATGAGACCCTCCCTCCCAGTCAAGGGTTGCCCACTCCCAGTGATGAGGAGCCACAGCTGTCACAGGAAAGCCCCAGGACCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS CCA 90 bp AGGCAGTACTGGGCTAAGTGTCTGAGCAGGCAGAGTCGTGGCCTGTaGCTGGAGTGGAGTGGTGATGACAGAGGCTTTGGGGCCGGGTGT +
Preference number: 5 (lower is better)
Translates to: RQYWAKCLSRQSRGL*LEWSGDDRGFGAGC
Trigger: ACACCCGGCCCCAAAGCCTCTGTCATCACCACTCCACTCCAGCCACAGGCCACGACTCTGCCTGCTCAGACACTTAGCCCAGTACTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS CCA 90 bp TGGCCACGTACACAGTCAGGGCCACGCAGGGCTGCTGCACGTACTTaGTGTCCCGGATCCACAGCTCACAGAATGACTCCGGAGGCACAA +
Preference number: 5 (lower is better)
Translates to: WPRTQSGPRRAAART*CPGSTAHRMTPEAQ
Trigger: TTGTGCCTCCGGAGTCATTCTGTGAGCTGTGGATCCGGGACACCAAGTACGTGCAGCAGCCCTGCGTGGCCCTGACTGTGTACGTGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS CCA 90 bp AGGACATCCCCTGCCTGGGTCAGGGTCACCTGCCTCCGAGGGTCCTaGTGCAGAATCACTGACACTGACTGGACACAGGCTCCATCTTGG +
Preference number: 5 (lower is better)
Translates to: RTSPAWVRVTCLRGS*CRITDTDWTQAPSW
Trigger: CCAAGATGGAGCCTGTGTCCAGTCAGTGTCAGTGATTCTGCACCAGGACCCTCGGAGGCAGGTGACCCTGACCCAGGCAGGGGATGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399391.7
ENST00000399397.6
ENST00000498332.5
CDS-3UTR CAA 90 bp CAACCTTATGTTCATGCCCTTCGGTTCCACGTGGCACAAAGTGGCACAGGGGGTGCAGCCCCCGAGGGCTaGGCATCCAGAAGGCGGAAG +
Preference number: 5 (lower is better)
Translates to: QPYVHALRFHVAQSGTGGAAPEG*ASRRRK
Trigger: CTTCCGCCTTCTGGATGCCAAGCCCTCGGGGGCTGC...ACCCCCTGTGCCACTTTGTGCCACGTGGAACCGAAGGGCATGAACATAAGGTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CAA 90 bp CCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCCTGGGTCCTCCAGCCTaGCAAGGGCCGCCCTGCCTG +
Preference number: 5 (lower is better)
Translates to: PLIPPFTLGQLETESGAGLGPPA*QGPPCL
Trigger: CAGGCAGGGCGGCCCTTGCAAGGCTGGAGGACCCAG...GCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CAA 90 bp GGCTCCTCTGAGCCCGACTCTGTCATGGCCTTGGAGAAAAGGCACACTGCAAAGAGGCAGCAGGGGTCCTaGGTGGGTAGGAGCAAGGCC +
Preference number: 5 (lower is better)
Translates to: GSSEPDSVMALEKRHTAKRQQGS*VGRSKA
Trigger: GGCCTTGCTCCTACCCACCAAGGACCCCTGCTGCCT...CTTTGCAGTGTGCCTTTTCTCCAAGGCCATGACAGAGTCGGGCTCAGAGGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS TCA 90 bp CTTGATGTAGACAGCCGAGGCACCATCCCAGGCCAGTGTGAAGGCTaGCTGATGCCGCACGATGACATAGCCGGCAAGCTGCTGCAGACG +
Preference number: 5 (lower is better)
Translates to: LDVDSRGTIPGQCEG*LMPHDDIAGKLLQT
Trigger: CGTCTGCAGCAGCTTGCCGGCTATGTCATCGTGCGGCATCAGTCAGCCTTCACACTGGCCTGGGATGGTGCCTCGGCTGTCTACATCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399391.7
ENST00000399397.6
ENST00000485669.1
ENST00000498332.5
CDS TCA 90 bp TTGCAGTCTTCCTTCACCACAGAGCCAGGTGGGTACAGAGTCCCGTaGAACTCACAGGGACACTCAGCTGGTGCCACGCAGCCCCCATCC +
Preference number: 5 (lower is better)
Translates to: LQSSFTTEPGGYRVP*NSQGHSAGATQPPS
Trigger: GGATGGGGGCTGCGTGGCACCAGCTGAGTGTCCCTGTGAGTTTCACGGGACTCTGTACCCACCTGGCTCTGTGGTGAAGGAAGACTGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399391.7
ENST00000399397.6
ENST00000498332.5
CDS TCA 90 bp CAGGTACACCCACTGGAGACAGGAAGTCATCCTGCGTGTTGCCATTaGAGGTGCCGCAGAGGCCCACGGTATCCTCCACCCATCGCTGGT +
Preference number: 5 (lower is better)
Translates to: QVHPLETGSHPACCH*RCRRGPRYPPPIAG
Trigger: ACCAGCGATGGGTGGAGGATACCGTGGGCCTCTGCGGCACCTTCAATGGCAACACGCAGGATGACTTCCTGTCTCCAGTGGGTGTACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS GCA 90 bp CTGACACGCTCAGGTTCAGCAGTTGCTGCTCACACGTCCTCTCCCTaGTCAGCTCCAGGTCCGTGTGCAGGTCGCTGCAGTTCACGAAGA +
Preference number: 5 (lower is better)
Translates to: LTRSGSAVAAHTSSP*SAPGPCAGRCSSRR
Trigger: TCTTCGTGAACTGCAGCGACCTGCACACGGACCTGGAGCTGAGCAGGGAGAGGACGTGTGAGCAGCAACTGCTGAACCTGAGCGTGTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS GCA 90 bp TGCTGGGGGTGCTATGTGAGTGGGTGGGTGCGCCTGGGTCATTGCTaGTGGAGTGAAAGGCAGTACTGGGCTAAGTGTCTGAGCAGGCAG +
Preference number: 5 (lower is better)
Translates to: CWGCYVSGWVRLGHC*WSERQYWAKCLSRQ
Trigger: CTGCCTGCTCAGACACTTAGCCCAGTACTGCCTTTCACTCCAGCAGCAATGACCCAGGCGCACCCACCCACTCACATAGCACCCCCAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS GCA 90 bp TTGTGGCACATGGCCACGTACACAGTCAGGGCCACGCAGGGCTGCTaGACGTACTTGGTGTCCCGGATCCACAGCTCACAGAATGACTCC +
Preference number: 5 (lower is better)
Translates to: LWHMATYTVRATQGC*TYLVSRIHSSQNDS
Trigger: GGAGTCATTCTGTGAGCTGTGGATCCGGGACACCAAGTACGTGCAGCAGCCCTGCGTGGCCCTGACTGTGTACGTGGCCATGTGCCACAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS GCA 90 bp ACATCCCCTGCCTGGGTCAGGGTCACCTGCCTCCGAGGGTCCTGGTaGAGAATCACTGACACTGACTGGACACAGGCTCCATCTTGGTTC +
Preference number: 5 (lower is better)
Translates to: TSPAWVRVTCLRGSW*RITDTDWTQAPSWF
Trigger: GAACCAAGATGGAGCCTGTGTCCAGTCAGTGTCAGTGATTCTGCACCAGGACCCTCGGAGGCAGGTGACCCTGACCCAGGCAGGGGATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399391.7
ENST00000399397.6
ENST00000498332.5
CDS CCA 90 bp GTGACAGCTGTGGCTCCTCATCACTGGGAGTGGGCAACCCTTGACTaGGAGGGAGGGTCTCATTGCCAAGGGCCTCTGTGGGAACCCAAA +
Preference number: 5 (lower is better)
Translates to: VTAVAPHHWEWATLD*EGGSHCQGPLWEPK
Trigger: TTTGGGTTCCCACAGAGGCCCTTGGCAATGAGACCCTCCCTCCCAGTCAAGGGTTGCCCACTCCCAGTGATGAGGAGCCACAGCTGTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS CCA 90 bp GGCAGTTGGACCCTCATGCCTCCATGGGTGACCTCCTTGGCCAGATaGATCTCCTGCTCACCCACAAAGAAGAGGCTGACAGCCCTGGAG +
Preference number: 5 (lower is better)
Translates to: GSWTLMPPWVTSLAR*ISCSPTKKRLTALE
Trigger: CTCCAGGGCTGTCAGCCTCTTCTTTGTGGGTGAGCAGGAGATCCATCTGGCCAAGGAGGTCACCCATGGAGGCATGAGGGTCCAACTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399391.7
ENST00000399397.6
ENST00000485669.1
ENST00000498332.5
CDS-3UTR CAA 90 bp CCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCGGGGCCGGCGGGGAGTaGAGATGCAGTGAGCTCCAG +
Preference number: 5 (lower is better)
Translates to: PLIPPFTLGQLETESGAGGAGGE*RCSELQ
Trigger: CTGGAGCTCACTGCATCTCAACTCCCCGCCGGCCCC...GCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CAA 90 bp GGCTCCTCTGAGCCCGACTCTGTCATGGCCTTGGAGAAAAGGCACACTGCAAAGGTGATGACAGAGGCTTaGGGGCCGGGTGTGGCCACT +
Preference number: 5 (lower is better)
Translates to: GSSEPDSVMALEKRHTAKVMTEA*GPGVAT
Trigger: AGTGGCCACACCCGGCCCCAAAGCCTCTGTCATCAC...CTTTGCAGTGTGCCTTTTCTCCAAGGCCATGACAGAGTCGGGCTCAGAGGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CAA 90 bp ATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTCCATGGCCCTGGGCCTaGCTGGTTTTGCTGGCCTCC +
Preference number: 5 (lower is better)
Translates to: IPPFTLGQLETESGAGRGPWPWA*LVLLAS
Trigger: GGAGGCCAGCAAAACCAGCAAGGCCCAGGGCCATGG...ACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CAA 90 bp GGACGCTCTGGTTCAGTGACAAGGATCTCACAAGTGCTCAGGGAGGCTGGGGCTGCACTGAAGGTGCGGTaGGACACCATGCGAAGGCAG +
Preference number: 5 (lower is better)
Translates to: GRSGSVTRISQVLREAGAALKVR*DTMRRQ
Trigger: CTGCCTTCGCATGGTGTCCAACCGCACCTTCAGTGC...AGCCCCAGCCTCCCTGAGCACTTGTGAGATCCTTGTCACTGAACCAGAGCGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CAA 90 bp CTGAGCCCGACTCTGTCATGGCCTTGGAGAAAAGGCACACTGCAAAGCCTGGAGGGCTGCTGCACGTACTaGGTGTCCCGGATCCACAGC +
Preference number: 5 (lower is better)
Translates to: LSPTLSWPWRKGTLQSLEGCCTY*VSRIHS
Trigger: GCTGTGGATCCGGGACACCAAGTACGTGCAGCAGCC...CTCCAGGCTTTGCAGTGTGCCTTTTCTCCAAGGCCATGACAGAGTCGGGCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CAA 90 bp GGACGCTCTGGTTCAGTGACAAGGATCTCACAAGTGCTCAGGGAGGCTGGGGCTGAGCGCCTCCCCTTCTaGACATTCGGGGATGGAGTC +
Preference number: 5 (lower is better)
Translates to: GRSGSVTRISQVLREAGAERLPF*TFGDGV
Trigger: GACTCCATCCCCGAATGTCAAGAAGGGGAGGCGCTC...AGCCCCAGCCTCCCTGAGCACTTGTGAGATCCTTGTCACTGAACCAGAGCGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CAA 90 bp TACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTGCTCTCAGGGCCGGCATaGTACACCATCTGGCAGCGC +
Preference number: 5 (lower is better)
Translates to: YPHSHWASWKQKVGLAEVLSGPA*YTIWQR
Trigger: GCGCTGCCAGATGGTGTACAATGCCGGCCCTGAGAG...CACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CAA 90 bp ACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCTGGGTCCTCCAGCCTaGCAAGGGCCGCCCTGCCTG +
Preference number: 5 (lower is better)
Translates to: TFNTPIHIGPAGNRKWGWLGPPA*QGPPCL
Trigger: CAGGCAGGGCGGCCCTTGCAAGGCTGGAGGACCCAG...CCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS TCA 90 bp CCAGCTGTCCAGAAAGGGAGCAGGGTCCTCAGCCCCACCCACCACTaGGCCATCCTTCAGGGTAAGGTCATTGGCTGCATCTCCATCACA +
Preference number: 5 (lower is better)
Translates to: PAVQKGSRVLSPTHH*AILQGKVIGCISIT
Trigger: TGTGATGGAGATGCAGCCAATGACCTTACCCTGAAGGATGGCTCAGTGGTGGGTGGGGCTGAGGACCCTGCTCCCTTTCTGGACAGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS TCA 90 bp GCAGGCCCACCTCACGGCAGCACTTGCAGAATCGGGCATAGGTGTTaGTGTTGTAGTTGTAGATGCTGGCGGATGGGCACCTCCCATCGC +
Preference number: 5 (lower is better)
Translates to: AGPPHGSTCRIGHRC*CCSCRCWRMGTSHR
Trigger: GCGATGGGAGGTGCCCATCCGCCAGCATCTACAACTACAACATCAACACCTATGCCCGATTCTGCAAGTGCTGCCGTGAGGTGGGCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS GCA 90 bp CATCCTCTGTCCTCACTAGGACTATGTCATCGCCCACCGCCTTCATaGCCACCAGAGCACCACCGGCTGCCAAGCTGGATAGCTGATAGG +
Preference number: 5 (lower is better)
Translates to: HPLSSLGLCHRPPPS*PPEHHRLPSWIADR
Trigger: CCTATCAGCTATCCAGCTTGGCAGCCGGTGGTGCTCTGGTGGGCATGAAGGCGGTGGGCGATGACATAGTCCTAGTGAGGACAGAGGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS GCA 90 bp GGCGATTGGAACACAGGTGGTGGATGTATTGGCCTCAGTGGTAGTTaGCAAAGCCTCCGCCAAACCCTCTACGATGCTCAGGGCTGGGGC +
Preference number: 5 (lower is better)
Translates to: GDWNTGGGCIGLSGS*QSLRQTLYDAQGWG
Trigger: GCCCCAGCCCTGAGCATCGTAGAGGGTTTGGCGGAGGCTTTGGCAACTACCACTGAGGCCAATACATCCACCACCTGTGTTCCAATCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS GCA 90 bp CGCTGGAGCACAGGAAGGGGCAGTAGTCAGAGCGCCGCCACTCGATaGACACATGAAATTTGTGGCACATGGCCACGTACACAGTCAGGG +
Preference number: 5 (lower is better)
Translates to: RWSTGRGSSQSAATR*THEICGTWPRTQSG
Trigger: CCCTGACTGTGTACGTGGCCATGTGCCACAAATTTCATGTGTGCATCGAGTGGCGGCGCTCTGACTACTGCCCCTTCCTGTGCTCCAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS GCA 90 bp AGGTGGGTACAGAGTCCCGTGAAACTCACAGGGACACTCAGCTGGTaGCACGCAGCCCCCATCCTCGAAGATGAGCCCATTGGGGCAATA +
Preference number: 5 (lower is better)
Translates to: RWVQSPVKLTGTLSW*HAAPILEDEPIGAI
Trigger: TATTGCCCCAATGGGCTCATCTTCGAGGATGGGGGCTGCGTGGCACCAGCTGAGTGTCCCTGTGAGTTTCACGGGACTCTGTACCCACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399391.7
ENST00000399397.6
ENST00000498332.5
CDS CCA 90 bp GCAACCCTTGACTGGGAGGGAGGGTCTCATTGCCAAGGGCCTCTGTaGGAACCCAAACTGCTGGCTCCACACAGTCCTCCAAGTAGACAC +
Preference number: 5 (lower is better)
Translates to: ATLDWEGGSHCQGPL*EPKLLAPHSPPSRH
Trigger: GTGTCTACTTGGAGGACTGTGTGGAGCCAGCAGTTTGGGTTCCCACAGAGGCCCTTGGCAATGAGACCCTCCCTCCCAGTCAAGGGTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS CCA 90 bp GTCCTGCTTATGACCTTAGTTACTGCAGGTGTCAGCACAGCCTTGTaGGATCCCGAGGAGGTGGGGGACCTGGAGATGGCTCCAGGGGAA +
Preference number: 5 (lower is better)
Translates to: VLLMTLVTAGVSTAL*DPEEVGDLEMAPGE
Trigger: TTCCCCTGGAGCCATCTCCAGGTCCCCCACCTCCTCGGGATCCCACAAGGCTGTGCTGACACCTGCAGTAACTAAGGTCATAAGCAGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS CCA 90 bp TGGGGGTGCTATGTGAGTGGGTGGGTGCGCCTGGGTCATTGCTGCTaGAGTGAAAGGCAGTACTGGGCTAAGTGTCTGAGCAGGCAGAGT +
Preference number: 5 (lower is better)
Translates to: WGCYVSGWVRLGHCC*SERQYWAKCLSRQS
Trigger: ACTCTGCCTGCTCAGACACTTAGCCCAGTACTGCCTTTCACTCCAGCAGCAATGACCCAGGCGCACCCACCCACTCACATAGCACCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS CCA 90 bp AGTCAGAGCGCCGCCACTCGATGCACACATGAAATTTGTGGCACATaGCCACGTACACAGTCAGGGCCACGCAGGGCTGCTGCACGTACT +
Preference number: 5 (lower is better)
Translates to: SQSAATRCTHEICGT*PRTQSGPRRAAART
Trigger: AGTACGTGCAGCAGCCCTGCGTGGCCCTGACTGTGTACGTGGCCATGTGCCACAAATTTCATGTGTGCATCGAGTGGCGGCGCTCTGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS CCA 90 bp AGTGCTCTGGGTCCAGAGGCCCTAGTATCCCATCCTGGCATGTCTTaGGTGGCTCACAGGCTGTCACACATGCCTGGTATGTGGAGTCGC +
Preference number: 5 (lower is better)
Translates to: SALGPEALVSHPGMS*VAHRLSHMPGMWSR
Trigger: GCGACTCCACATACCAGGCATGTGTGACAGCCTGTGAGCCACCCAAGACATGCCAGGATGGGATACTAGGGCCTCTGGACCCAGAGCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS CCA 90 bp GTCACCTGCCTCCGAGGGTCCTGGTGCAGAATCACTGACACTGACTaGACACAGGCTCCATCTTGGTTCAGGCCACATGGGGCATTCTGC +
Preference number: 5 (lower is better)
Translates to: VTCLRGSWCRITDTD*TQAPSWFRPHGAFC
Trigger: GCAGAATGCCCCATGTGGCCTGAACCAAGATGGAGCCTGTGTCCAGTCAGTGTCAGTGATTCTGCACCAGGACCCTCGGAGGCAGGTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399391.7
ENST00000399397.6
ENST00000498332.5
CDS CCA 90 bp GGCGGGATGATCTTGTACTGGTCAAACAGAAGGACATCCCCTGCCTaGGTCAGGGTCACCTGCCTCCGAGGGTCCTGGTGCAGAATCACT +
Preference number: 5 (lower is better)
Translates to: GGMILYWSNRRTSPA*VRVTCLRGSWCRIT
Trigger: AGTGATTCTGCACCAGGACCCTCGGAGGCAGGTGACCCTGACCCAGGCAGGGGATGTCCTTCTGTTTGACCAGTACAAGATCATCCCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399391.7
ENST00000399397.6
ENST00000498332.5
CDS CCA 90 bp CAGGGGTGCTGCTCCTGCATTCATTCTTGCGGATGGTCATGCGGATaGTCACCTTCTTGCAGGAGCGCCCATCCTCCTTACAGGTCCTGC +
Preference number: 5 (lower is better)
Translates to: QGCCSCIHSCGWSCG*SPSCRSAHPPYRSC
Trigger: GCAGGACCTGTAAGGAGGATGGGCGCTCCTGCAAGAAGGTGACCATCCGCATGACCATCCGCAAGAATGAATGCAGGAGCAGCACCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CAA 90 bp TTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGCAGCCCCCGAGGGCTaGGCATCCAGAAGGCGGAAG +
Preference number: 5 (lower is better)
Translates to: LIPPFTLGQLETESGAGRAAPEG*ASRRRK
Trigger: CTTCCGCCTTCTGGATGCCAAGCCCTCGGGGGCTGC...TCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CAA 90 bp AGCTGTGGTTCCCATGTAAGCACCATGCACCTTCCCATCTTCCCACAGCTCTCATGGGTCCCGGCAGGTTaGGAAGCAGGGGCTGGCACA +
Preference number: 5 (lower is better)
Translates to: SCGSHVSTMHLPIFPQLSWVPAG*EAGAGT
Trigger: TGTGCCAGCCCCTGCTTCCAAACCTGCCGGGACCCA...TGAGAGCTGTGGGAAGATGGGAAGGTGCATGGTGCTTACATGGGAACCACAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CAA 90 bp CCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGGGCCGGCGGGGAGTaGAGATGCAGTGAGCTCCAG +
Preference number: 5 (lower is better)
Translates to: PPLIPPFTLGQLETESGAGAGGE*RCSELQ
Trigger: CTGGAGCTCACTGCATCTCAACTCCCCGCCGGCCCC...AGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CAA 90 bp CCAACAGACACTCTCTTGCTAAACAGTCCCATGGAGCACAGAGACTGGCACTGGGCCCATCAGTGGCTGTaGACAGGCTGGCGGCAGCTG +
Preference number: 5 (lower is better)
Translates to: PTDTLLLNSPMEHRDWHWAHQWL*TGWRQL
Trigger: CAGCTGCCGCCAGCCTGTCAACAGCCACTGATGGGC...CCAGTGCCAGTCTCTGTGCTCCATGGGACTGTTTAGCAAGAGAGTGTCTGTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CAA 90 bp TACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTGCGCGGTCCAGTGGCATaGAAGCGTCTGCAGTCACAG +
Preference number: 5 (lower is better)
Translates to: YPHSHWASWKQKVGLAEVRGPVA*KRLQSQ
Trigger: CTGTGACTGCAGACGCTTCAATGCCACTGGACCGCG...CACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CAA 90 bp CAACCTTATGTTCATGCCCTTCGGTTCCACGTGGCACAAAGTGGCACAGGGGGTCTCTCAGGGCCGGCATaGTACACCATCTGGCAGCGC +
Preference number: 5 (lower is better)
Translates to: QPYVHALRFHVAQSGTGGLSGPA*YTIWQR
Trigger: GCGCTGCCAGATGGTGTACAATGCCGGCCCTGAGAG...ACCCCCTGTGCCACTTTGTGCCACGTGGAACCGAAGGGCATGAACATAAGGTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CAA 90 bp ATGTTCATGCCCTTCGGTTCCACGTGGCACAAAGTGGCACAGGGGGTGGGAGACGTGCTGCACTCCCACTaGCCTGAGGTGCATGTGCAA +
Preference number: 5 (lower is better)
Translates to: MFMPFGSTWHKVAQGVGDVLHSH*PEVHVQ
Trigger: TTGCACATGCACCTCAGGCAAGTGGGAGTGCAGCAC...GTCTCCCACCCCCTGTGCCACTTTGTGCCACGTGGAACCGAAGGGCATGAACAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CAA 90 bp ATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTTCCTGCGTGTTGCCATaGAAGGTGCCGCAGAGGCCC +
Preference number: 5 (lower is better)
Translates to: IPPFTLGQLETESGAGRGSCVLP*KVPQRP
Trigger: GGGCCTCTGCGGCACCTTCAATGGCAACACGCAGGA...ACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS TCA 90 bp TGGGTCATTGCTGCTGGAGTGAAAGGCAGTACTGGGCTAAGTGTCTaGGCAGGCAGAGTCGTGGCCTGTGGCTGGAGTGGAGTGGTGATG +
Preference number: 5 (lower is better)
Translates to: WVIAAGVKGSTGLSV*AGRVVACGWSGVVM
Trigger: CATCACCACTCCACTCCAGCCACAGGCCACGACTCTGCCTGCTCAGACACTTAGCCCAGTACTGCCTTTCACTCCAGCAGCAATGACCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS TCA 90 bp CAGAGTTCCGTGGTATTCCTGTGCACAGTGAGCGCCTCCCCTTCTTaGCATTCGGGGATGGAGTCTGGACAGTCACCACAGGCGCACTTG +
Preference number: 5 (lower is better)
Translates to: QSSVVFLCTVSASPS*HSGMESGQSPQAHL
Trigger: CAAGTGCGCCTGTGGTGACTGTCCAGACTCCATCCCCGAATGTCAAGAAGGGGAGGCGCTCACTGTGCACAGGAATACCACGGAACTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342528.2
CDS TCA 90 bp CATGTGGCGGGGAACGTGTACCGGCGGCCATCAAAGGTTGTGAAGTaGATGTCACCAGTCACTGAGCACTCAGCTGGGCAGACAGCTGTG +
Preference number: 5 (lower is better)
Translates to: HVAGNVYRRPSKVVK*MSPVTEHSAGQTAV
Trigger: CACAGCTGTCTGCCCAGCTGAGTGCTCAGTGACTGGTGACATTCACTTCACAACCTTTGATGGCCGCCGGTACACGTTCCCCGCCACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399391.7
ENST00000399397.6
ENST00000498332.5
CDS TCA 90 bp CAGAGTTCCGTGGTATTCCTGTGCACAGTGAGCGCCTCCCCTTCTTaGCATTCGGGGATGGAGTCTGGACAGTCACCACAGGCGCAGAAG +
Preference number: 5 (lower is better)
Translates to: QSSVVFLCTVSASPS*HSGMESGQSPQAQK
Trigger: CTTCTGCGCCTGTGGTGACTGTCCAGACTCCATCCCCGAATGTCAAGAAGGGGAGGCGCTCACTGTGCACAGGAATACCACGGAACTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS TCA 90 bp CACACTCGTACTTGGCGCAGCCACACACATTCTCCACGCTGTGCATaGACTCCTCATCCAGCTGGGATTTCTCCCACAGATGGCACCGGG +
Preference number: 5 (lower is better)
Translates to: HTRTWRSHTHSPRCA*TPHPAGISPTDGTG
Trigger: CCCGGTGCCATCTGTGGGAGAAATCCCAGCTGGATGAGGAGTTCATGCACAGCGTGGAGAATGTGTGTGGCTGCGCCAAGTACGAGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS GCA 90 bp AGACCCGTTGGCTGTGACGTGAAGGAAGAAGTTGGGTCTGTCTGCTaGCTCCAGGGACACCACATCTGGGTCATGGGCCTTGGCCTTGTA +
Preference number: 5 (lower is better)
Translates to: RPVGCDVKEEVGSVC*LQGHHIWVMGLGLV
Trigger: TACAAGGCCAAGGCCCATGACCCAGATGTGGTGTCCCTGGAGGCAGCAGACAGACCCAACTTCTTCCTTCACGTCACAGCCAACGGGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS GCA 90 bp CTTGTTGTCTCCATGGCACCTGACACCATGCCAGGTGTGGGTGTCTaGAGTGCAACAGGGAGGGATGAGGACTCTGGTGTATGGGGGATG +
Preference number: 5 (lower is better)
Translates to: LVVSMAPDTMPGVGV*SATGRDEDSGVWGM
Trigger: CATCCCCCATACACCAGAGTCCTCATCCCTCCCTGTTGCACTGCAGACACCCACACCTGGCATGGTGTCAGGTGCCATGGAGACAACAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS GCA 90 bp TGGGCAGAGACACTTGCTTGGATAGGATGGCCACCTTCCCTGTGGTaGTCTTTCGTGGGACAACAGATACCATGGAGGCCGTGCCCTCAG +
Preference number: 5 (lower is better)
Translates to: WAETLAWIGWPPSLW*SFVGQQIPWRPCPQ
Trigger: CTGAGGGCACGGCCTCCATGGTATCTGTTGTCCCACGAAAGAGCACCACAGGGAAGGTGGCCATCCTATCCAAGCAAGTGTCTCTGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS GCA 90 bp GGCCCACCCTCTGCAGAACCATACATGGAAGTGGGCAGAGACACTTaGTTGGATAGGATGGCCACCTTCCCTGTGGTGCTCTTTCGTGGG +
Preference number: 5 (lower is better)
Translates to: GPPSAEPYMEVGRDT*LDRMATFPVVLFRG
Trigger: CCCACGAAAGAGCACCACAGGGAAGGTGGCCATCCTATCCAAGCAAGTGTCTCTGCCCACTTCCATGTATGGTTCTGCAGAGGGTGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS GCA 90 bp AATTTGTGGCACATGGCCACGTACACAGTCAGGGCCACGCAGGGCTaGTGCACGTACTTGGTGTCCCGGATCCACAGCTCACAGAATGAC +
Preference number: 5 (lower is better)
Translates to: NLWHMATYTVRATQG*CTYLVSRIHSSQND
Trigger: GTCATTCTGTGAGCTGTGGATCCGGGACACCAAGTACGTGCAGCAGCCCTGCGTGGCCCTGACTGTGTACGTGGCCATGTGCCACAAATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS GCA 90 bp TATCCCATCCTGGCATGTCTTGGGTGGCTCACAGGCTGTCACACATaGCTGGTATGTGGAGTCGCTGGAGCACAGGAAGGGGCAGTAGTC +
Preference number: 5 (lower is better)
Translates to: YPILACLGWLTGCHT*LVCGVAGAQEGAVV
Trigger: GACTACTGCCCCTTCCTGTGCTCCAGCGACTCCACATACCAGGCATGTGTGACAGCCTGTGAGCCACCCAAGACATGCCAGGATGGGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS GCA 90 bp AGAAGCTCTGTCCCTCGGGCTCATGGCGACCCACCAGGGTGTAGCTaGCCTTTCCGGAGAGGTAGTAGTAGAGCCCATCAAATGTCTCCA +
Preference number: 5 (lower is better)
Translates to: RSSVPRAHGDPPGCS*PFRRGSSRAHQMSP
Trigger: TGGAGACATTTGATGGGCTCTACTACTACCTCTCCGGAAAGGGCAGCTACACCCTGGTGGGTCGCCATGAGCCCGAGGGACAGAGCTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399391.7
ENST00000399397.6
ENST00000498332.5
CDS GCA 90 bp GTATGGCGGGATGATCTTGTACTGGTCAAACAGAAGGACATCCCCTaGCTGGGTCAGGGTCACCTGCCTCCGAGGGTCCTGGTGCAGAAT +
Preference number: 5 (lower is better)
Translates to: VWRDDLVLVKQKDIP*LGQGHLPPRVLVQN
Trigger: ATTCTGCACCAGGACCCTCGGAGGCAGGTGACCCTGACCCAGGCAGGGGATGTCCTTCTGTTTGACCAGTACAAGATCATCCCGCCATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399391.7
ENST00000399397.6
ENST00000498332.5
CDS GCA 90 bp GGTTCACAGGGGTGCTGCTCCTGCATTCATTCTTGCGGATGGTCATaGGGATGGTCACCTTCTTGCAGGAGCGCCCATCCTCCTTACAGG +
Preference number: 5 (lower is better)
Translates to: GSQGCCSCIHSCGWS*GWSPSCRSAHPPYR
Trigger: CCTGTAAGGAGGATGGGCGCTCCTGCAAGAAGGTGACCATCCGCATGACCATCCGCAAGAATGAATGCAGGAGCAGCACCCCTGTGAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS GCA 90 bp CGCAGGACACTAGGTTCACAGGGGTGCTGCTCCTGCATTCATTCTTaGGGATGGTCATGCGGATGGTCACCTTCTTGCAGGAGCGCCCAT +
Preference number: 5 (lower is better)
Translates to: RRTLGSQGCCSCIHS*GWSCGWSPSCRSAH
Trigger: ATGGGCGCTCCTGCAAGAAGGTGACCATCCGCATGACCATCCGCAAGAATGAATGCAGGAGCAGCACCCCTGTGAACCTAGTGTCCTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS CCA 90 bp GCAGCGCGGTCCAGTGGCATTGAAGCGTCTGCAGTCACAGAAGGCTaGGTGCACACACTCGCCTCCATTGAAGCAGGAGAACAAGTAGGA +
Preference number: 5 (lower is better)
Translates to: AARSSGIEASAVTEG*VHTLASIEAGEQVG
Trigger: TCCTACTTGTTCTCCTGCTTCAATGGAGGCGAGTGTGTGCACCCAGCCTTCTGTGACTGCAGACGCTTCAATGCCACTGGACCGCGCTGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399391.7
ENST00000399397.6
ENST00000428619.1
ENST00000498332.5
CDS CCA 90 bp AGCATTGTTGTTCCCACACAGCCCATGGGTCCAGCCCAGAAGCTCTaGACTCATCTTGATGTAGACAGCCGAGGCACCATCCCAGGCCAG +
Preference number: 5 (lower is better)
Translates to: SIVVPTQPMGPAQKL*THLDVDSRGTIPGQ
Trigger: CTGGCCTGGGATGGTGCCTCGGCTGTCTACATCAAGATGAGTCCAGAGCTTCTGGGCTGGACCCATGGGCTGTGTGGGAACAACAATGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399391.7
ENST00000399397.6
ENST00000485669.1
ENST00000498332.5
CDS-3UTR CAA 90 bp TTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGATGGGTCCCGGCAGGTTaGGAAGCAGGGGCTGGCACA +
Preference number: 5 (lower is better)
Translates to: LIPPFTLGQLETESGAGRWVPAG*EAGAGT
Trigger: TGTGCCAGCCCCTGCTTCCAAACCTGCCGGGACCCA...TCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CAA 90 bp ACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCGGGAGTGGGCAACCCTaGACTGGGAGGGAGGGTCTC +
Preference number: 5 (lower is better)
Translates to: TTFNTPIHIGPAGNRKWGGSGQP*TGREGL
Trigger: GAGACCCTCCCTCCCAGTCAAGGGTTGCCCACTCCC...GCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CAA 90 bp ATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTCGGACTGTCACAGCCTaGGTCATGAGCGGGAAGCGA +
Preference number: 5 (lower is better)
Translates to: IPPFTLGQLETESGAGRGRTVTA*VMSGKR
Trigger: TCGCTTCCCGCTCATGACCAAGGCTGTGACAGTCCG...ACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CAA 90 bp ATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTGTCTGGAGGAGGGACTaGCTGTCAAGGAGGGCTGTG +
Preference number: 5 (lower is better)
Translates to: IPPFTLGQLETESGAGRGVWRRD*LSRRAV
Trigger: CACAGCCCTCCTTGACAGCAAGTCCCTCCTCCAGAC...ACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CAA 90 bp AGCTGTGGTTCCCATGTAAGCACCATGCACCTTCCCATCTTCCCACAGCTCTCAGGTGTCAGCACAGCCTaGTGGGATCCCGAGGAGGTG +
Preference number: 5 (lower is better)
Translates to: SCGSHVSTMHLPIFPQLSGVSTA*WDPEEV
Trigger: CACCTCCTCGGGATCCCACAAGGCTGTGCTGACACC...TGAGAGCTGTGGGAAGATGGGAAGGTGCATGGTGCTTACATGGGAACCACAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CAA 90 bp ACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCGCCCATCAGTGGCTGTaGACAGGCTGGCGGCAGCTG +
Preference number: 5 (lower is better)
Translates to: TTFNTPIHIGPAGNRKWGAHQWL*TGWRQL
Trigger: CAGCTGCCGCCAGCCTGTCAACAGCCACTGATGGGC...GCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CAA 90 bp AATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGGCAGGACTCCAGAGGTaGGCAATGTGGCTCCCAGCA +
Preference number: 5 (lower is better)
Translates to: NTPIHIGPAGNRKWGWQRAGLQR*AMWLPA
Trigger: TGCTGGGAGCCACATTGCCAACCTCTGGAGTCCTGC...CCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CAA 90 bp AATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGGAGCGCCTCCCCTTCTaGACATTCGGGGATGGAGTC +
Preference number: 5 (lower is better)
Translates to: NTPIHIGPAGNRKWGWQRERLPF*TFGDGV
Trigger: GACTCCATCCCCGAATGTCAAGAAGGGGAGGCGCTC...CCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CAA 90 bp CCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCCCCACGACTGTAGCCTaGTCCCCCATGGCAAGGGTC +
Preference number: 5 (lower is better)
Translates to: PLIPPFTLGQLETESGAGPTTVA*SPMARV
Trigger: GACCCTTGCCATGGGGGACAAGGCTACAGTCGTGGG...GCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CAA 90 bp AGGCTGCTGCCCCTGGACCTAAAGCCCATTTTCCATCTCAAACCAGGGACAGAGCGCGGTCCAGTGGCATaGAAGCGTCTGCAGTCACAG +
Preference number: 5 (lower is better)
Translates to: RLLPLDLKPIFHLKPGTERGPVA*KRLQSQ
Trigger: CTGTGACTGCAGACGCTTCAATGCCACTGGACCGCG...CTCTGTCCCTGGTTTGAGATGGAAAATGGGCTTTAGGTCCAGGGGCAGCAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CAA 90 bp ATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTGACACAGGCTCCATCTaGGTTCAGGCCACATGGGGC +
Preference number: 5 (lower is better)
Translates to: IPPFTLGQLETESGAGRGDTGSI*VQATWG
Trigger: GCCCCATGTGGCCTGAACCAAGATGGAGCCTGTGTC...ACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CAA 90 bp CCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCCCATCGCTGGTCCACTaGCAGGTACAGTCGGAGCCC +
Preference number: 5 (lower is better)
Translates to: PLIPPFTLGQLETESGAGPSLVH*QVQSEP
Trigger: GGGCTCCGACTGTACCTGCAAGTGGACCAGCGATGG...GCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CAA 90 bp TACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTGCAGGGGCTATACTCCTaGGAGGCCTCACAGGACAGT +
Preference number: 5 (lower is better)
Translates to: YPHSHWASWKQKVGLAEVQGLYS*EASQDS
Trigger: ACTGTCCTGTGAGGCCTCCAAGGAGTATAGCCCCTG...CACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CAA 90 bp GGCTCCTCTGAGCCCGACTCTGTCATGGCCTTGGAGAAAAGGCACACTGCAAAGCTCATGACTCCATCTTaGCAGTGGCAGTGGCCCAGG +
Preference number: 5 (lower is better)
Translates to: GSSEPDSVMALEKRHTAKLMTPS*QWQWPR
Trigger: CCTGGGCCACTGCCACTGCAAAGATGGAGTCATGAG...CTTTGCAGTGTGCCTTTTCTCCAAGGCCATGACAGAGTCGGGCTCAGAGGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CAA 90 bp TTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGCAGCAGGGGTCCTaGGTGGGTAGGAGCAAGGCC +
Preference number: 5 (lower is better)
Translates to: FNTPIHIGPAGNRKWGWQRQQGS*VGRSKA
Trigger: GGCCTTGCTCCTACCCACCAAGGACCCCTGCTGCCT...CTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CAA 90 bp CAGGGCAGTGCTGGGGCCTGCACAACCTTATGTTCATGCCCTTCGGTTCCACGTGCACACTCAGTCTCATaGAGCGGTGGGCAGCTTATG +
Preference number: 5 (lower is better)
Translates to: QGSAGACTTLCSCPSVPRAHSVS*SGGQLM
Trigger: CATAAGCTGCCCACCGCTCAATGAGACTGAGTGTGC...ACGTGGAACCGAAGGGCATGAACATAAGGTTGTGCAGGCCCCAGCACTGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CAA 90 bp GCCAAGAGAATGGGCCACTGCATCCTGCCCCTGTGCTTGGTCTTGGGTCCAGCTCCACCATCTTTGTCTTaGGGAACTCCTTCTGGGCAG +
Preference number: 5 (lower is better)
Translates to: AKRMGHCILPLCLVLGPAPPSLS*GTPSGQ
Trigger: CTGCCCAGAAGGAGTTCCCAAAGACAAAGATGGTGG...AGCTGGACCCAAGACCAAGCACAGGGGCAGGATGCAGTGGCCCATTCTCTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS TCA 90 bp ACTGGTACAGAGGGCAGCAGAGTTCCGTGGTATTCCTGTGCACAGTaGGCGCCTCCCCTTCTTGACATTCGGGGATGGAGTCTGGACAGT +
Preference number: 5 (lower is better)
Translates to: TGTEGSRVPWYSCAQ*APPLLDIRGWSLDS
Trigger: ACTGTCCAGACTCCATCCCCGAATGTCAAGAAGGGGAGGCGCTCACTGTGCACAGGAATACCACGGAACTCTGCTGCCCTCTGTACCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS TCA 90 bp ACTGACATGTGGCGGGGAACGTGTACCGGCGGCCATCAAAGGTTGTaGAGTGAATGTCACCAGTCACTGAGCACTCAGCTGGGCAGACAG +
Preference number: 5 (lower is better)
Translates to: TDMWRGTCTGGHQRL*SECHQSLSTQLGRQ
Trigger: CTGTCTGCCCAGCTGAGTGCTCAGTGACTGGTGACATTCACTTCACAACCTTTGATGGCCGCCGGTACACGTTCCCCGCCACATGTCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399391.7
ENST00000399397.6
ENST00000498332.5
CDS TCA 90 bp CTCCATCTTGGTTCAGGCCACATGGGGCATTCTGCAATGTCACGGTaGAGGTGCCCGAAGAGCGGCTCTTGGCCAGGATGTACTGACATG +
Preference number: 5 (lower is better)
Translates to: LHLGSGHMGHSAMSR*RCPKSGSWPGCTDM
Trigger: CATGTCAGTACATCCTGGCCAAGAGCCGCTCTTCGGGCACCTTCACCGTGACATTGCAGAATGCCCCATGTGGCCTGAACCAAGATGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399391.7
ENST00000399397.6
ENST00000498332.5
CDS CCA 90 bp CAGTCACCCTTGTTGTCTCCATGGCACCTGACACCATGCCAGGTGTaGGTGTCTGCAGTGCAACAGGGAGGGATGAGGACTCTGGTGTAT +
Preference number: 5 (lower is better)
Translates to: QSPLLSPWHLTPCQV*VSAVQQGGMRTLVY
Trigger: ATACACCAGAGTCCTCATCCCTCCCTGTTGCACTGCAGACACCCACACCTGGCATGGTGTCAGGTGCCATGGAGACAACAAGGGTGACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS CCA 90 bp ACACTAGGTTCACAGGGGTGCTGCTCCTGCATTCATTCTTGCGGATaGTCATGCGGATGGTCACCTTCTTGCAGGAGCGCCCATCCTCCT +
Preference number: 5 (lower is better)
Translates to: TLGSQGCCSCIHSCG*SCGWSPSCRSAHPP
Trigger: AGGAGGATGGGCGCTCCTGCAAGAAGGTGACCATCCGCATGACCATCCGCAAGAATGAATGCAGGAGCAGCACCCCTGTGAACCTAGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS CCA 90 bp ATACCCAGCCCTAAGGGGCCCATTTCCCCTCTTCTTCGGGTTCCGTaGCAGGGCTACGTACAGGAAGTCATCCTGCGTGTTGCCATTGAA +
Preference number: 5 (lower is better)
Translates to: IPSPKGPISPLLRVP*QGYVQEVILRVAIE
Trigger: TTCAATGGCAACACGCAGGATGACTTCCTGTACGTAGCCCTGCCACGGAACCCGAAGAAGAGGGGAAATGGGCCCCTTAGGGCTGGGTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498332.5
CDS-3UTR CAA 90 bp AGGCTGCTGCCCCTGGACCTAAAGCCCATTTTCCATCTCAAACCAGGGACAGAGTCATGGGCCTTGGCCTaGTACAGAGCAGCTGTCAGC +
Preference number: 5 (lower is better)
Translates to: RLLPLDLKPIFHLKPGTESWALA*YRAAVS
Trigger: GCTGACAGCTGCTCTGTACAAGGCCAAGGCCCATGA...CTCTGTCCCTGGTTTGAGATGGAAAATGGGCTTTAGGTCCAGGGGCAGCAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CAA 90 bp ACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCGGAGGGAGGGTCTCATaGCCAAGGGCCTCTGTGGGA +
Preference number: 5 (lower is better)
Translates to: TTFNTPIHIGPAGNRKWGGGRVS*PRASVG
Trigger: TCCCACAGAGGCCCTTGGCAATGAGACCCTCCCTCC...GCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CAA 90 bp ATGTTCATGCCCTTCGGTTCCACGTGGCACAAAGTGGCACAGGGGGTGGGAGACAGATCACAGTCACCCTaGTTGTCTCCATGGCACCTG +
Preference number: 5 (lower is better)
Translates to: MFMPFGSTWHKVAQGVGDRSQSP*LSPWHL
Trigger: CAGGTGCCATGGAGACAACAAGGGTGACTGTGATCT...GTCTCCCACCCCCTGTGCCACTTTGTGCCACGTGGAACCGAAGGGCATGAACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CAA 90 bp AGCTGTGGTTCCCATGTAAGCACCATGCACCTTCCCATCTTCCCACAGCTCTCAGTCTGGAGGAGGGACTaGCTGTCAAGGAGGGCTGTG +
Preference number: 5 (lower is better)
Translates to: SCGSHVSTMHLPIFPQLSVWRRD*LSRRAV
Trigger: CACAGCCCTCCTTGACAGCAAGTCCCTCCTCCAGAC...TGAGAGCTGTGGGAAGATGGGAAGGTGCATGGTGCTTACATGGGAACCACAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CAA 90 bp CTTATGTTCATGCCCTTCGGTTCCACGTGGCACAAAGTGGCACAGGGGGTGGGAGGCAGAGACACTTGCTaGGATAGGATGGCCACCTTC +
Preference number: 5 (lower is better)
Translates to: LMFMPFGSTWHKVAQGVGGRDTC*DRMATF
Trigger: GAAGGTGGCCATCCTATCCAAGCAAGTGTCTCTGCC...TCCCACCCCCTGTGCCACTTTGTGCCACGTGGAACCGAAGGGCATGAACATAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CAA 90 bp GGCTCCTCTGAGCCCGACTCTGTCATGGCCTTGGAGAAAAGGCACACTGCAAAGCAGGTGGTGGATGTATaGGCCTCAGTGGTAGTTGCC +
Preference number: 5 (lower is better)
Translates to: GSSEPDSVMALEKRHTAKQVVDV*ASVVVA
Trigger: GGCAACTACCACTGAGGCCAATACATCCACCACCTG...CTTTGCAGTGTGCCTTTTCTCCAAGGCCATGACAGAGTCGGGCTCAGAGGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CAA 90 bp GGCTCCTCTGAGCCCGACTCTGTCATGGCCTTGGAGAAAAGGCACACTGCAAAGCCCAGGTTGGCACTTTaGCAGTCCAGTACATGGACG +
Preference number: 5 (lower is better)
Translates to: GSSEPDSVMALEKRHTAKPRLAL*QSSTWT
Trigger: CGTCCATGTACTGGACTGCAAAAGTGCCAACCTGGG...CTTTGCAGTGTGCCTTTTCTCCAAGGCCATGACAGAGTCGGGCTCAGAGGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CAA 90 bp ATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTTGGGCCTTGCTGGTTTaGCTGGCCTCCACGATCATG +
Preference number: 5 (lower is better)
Translates to: IPPFTLGQLETESGAGRGWALLV*LASTIM
Trigger: CATGATCGTGGAGGCCAGCAAAACCAGCAAGGCCCA...ACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CAA 90 bp ACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCGGCTGCTGCACGTACTaGGTGTCCCGGATCCACAGC +
Preference number: 5 (lower is better)
Translates to: TTFNTPIHIGPAGNRKWGGCCTY*VSRIHS
Trigger: GCTGTGGATCCGGGACACCAAGTACGTGCAGCAGCC...GCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CAA 90 bp CCAACAGACACTCTCTTGCTAAACAGTCCCATGGAGCACAGAGACTGGCACTGGCAGGCCACACTGCACTaGGGGACAGCGGAAGTTCTC +
Preference number: 5 (lower is better)
Translates to: PTDTLLLNSPMEHRDWHWQATLH*GTAEVL
Trigger: GAGAACTTCCGCTGTCCCCAAGTGCAGTGTGGCCTG...CCAGTGCCAGTCTCTGTGCTCCATGGGACTGTTTAGCAAGAGAGTGTCTGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CAA 90 bp CAGATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAGTGGCTGCTGCTGGGTaGCCCGGCTGGCTCTGGCTG +
Preference number: 5 (lower is better)
Translates to: QISTTFNTPIHIGPAGNRVAAAG*PGWLWL
Trigger: CAGCCAGAGCCAGCCGGGCAACCCAGCAGCAGCCAC...TCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAATCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399397.6
CDS-3UTR CAA 90 bp ACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGGCAGTGCACAGTGCATaGCCGGAGCTGGGTCCTCCA +
Preference number: 5 (lower is better)
Translates to: TFNTPIHIGPAGNRKWGWAVHSA*PELGPP
Trigger: TGGAGGACCCAGCTCCGGCAATGCACTGTGCACTGC...CCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CAA 90 bp AATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGGTGCTGCACTCCCACTaGCCTGAGGTGCATGTGCAA +
Preference number: 5 (lower is better)
Translates to: NTPIHIGPAGNRKWGWQRVLHSH*PEVHVQ
Trigger: TTGCACATGCACCTCAGGCAAGTGGGAGTGCAGCAC...CCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CAA 90 bp TTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGACCATCGCTGGTCCACTaGCAGGTACAGTCGGAGCCC +
Preference number: 5 (lower is better)
Translates to: LIPPFTLGQLETESGAGRPSLVH*QVQSEP
Trigger: GGGCTCCGACTGTACCTGCAAGTGGACCAGCGATGG...TCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CAA 90 bp CCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTTCCTGCGTGTTGCCATaGAAGGTGCCGCAGAGGCCC +
Preference number: 5 (lower is better)
Translates to: PPLIPPFTLGQLETESGASCVLP*KVPQRP
Trigger: GGGCCTCTGCGGCACCTTCAATGGCAACACGCAGGA...AGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CAA 90 bp AGGCTGCTGCCCCTGGACCTAAAGCCCATTTTCCATCTCAAACCAGGGACAGAGCAGGGGCTATACTCCTaGGAGGCCTCACAGGACAGT +
Preference number: 5 (lower is better)
Translates to: RLLPLDLKPIFHLKPGTEQGLYS*EASQDS
Trigger: ACTGTCCTGTGAGGCCTCCAAGGAGTATAGCCCCTG...CTCTGTCCCTGGTTTGAGATGGAAAATGGGCTTTAGGTCCAGGGGCAGCAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CAA 90 bp ATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTCTCATGACTCCATCTTaGCAGTGGCAGTGGCCCAGG +
Preference number: 5 (lower is better)
Translates to: IPPFTLGQLETESGAGRGLMTPS*QWQWPR
Trigger: CCTGGGCCACTGCCACTGCAAAGATGGAGTCATGAG...ACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CAA 90 bp ACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTCAGTGCAGGCGCACTaGGCCTCCGGGATGCAGAGT +
Preference number: 5 (lower is better)
Translates to: TTFNTPIHIGPAGNRKWGSVQAH*ASGMQS
Trigger: ACTCTGCATCCCGGAGGCCAAGTGCGCCTGCACTGA...GCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CAA 90 bp ATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTACCGGGGCACCGGGATaGTGTCACAGTCACATTCAC +
Preference number: 5 (lower is better)
Translates to: IPPFTLGQLETESGAGRGTGAPG*CHSHIH
Trigger: GTGAATGTGACTGTGACACAATCCCGGTGCCCCGGT...ACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CAA 90 bp GGCCCTAGAATCCACCATCTTTGTCTTTGGGAACTCCTTCTGGGCAGCCATCTGAGCCTGGAGCTGCATTaGCAGGCTGAAGGTACCCCC +
Preference number: 5 (lower is better)
Translates to: GPRIHHLCLWELLLGSHLSLELH*QAEGTP
Trigger: GGGGGTACCTTCAGCCTGCAAATGCAGCTCCAGGCT...CAGATGGCTGCCCAGAAGGAGTTCCCAAAGACAAAGATGGTGGATTCTAGGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS GCA 90 bp GTGGTTCTCTGGTCCCACAAGAGGGTGATGTGCTCCTGTGGGAAATaGACCAGTGTGAAAAATCCCACTCGCCATGTGTGGACCTCCTGC +
Preference number: 5 (lower is better)
Translates to: VVLWSHKRVMCSCGK*TSVKNPTRHVWTSC
Trigger: GCAGGAGGTCCACACATGGCGAGTGGGATTTTTCACACTGGTGCATTTCCCACAGGAGCACATCACCCTCTTGTGGGACCAGAGAACCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS CCA 90 bp GCCTTGCTGGTTTTGCTGGCCTCCACGATCATGAGTCCTGAGCTGTaGAGCCACTGGATCTGGATGTCTGAGGGAGTCAGGATCATGTAC +
Preference number: 5 (lower is better)
Translates to: ALLVLLASTIMSPEL*SHWIWMSEGVRIMY
Trigger: GTACATGATCCTGACTCCCTCAGACATCCAGATCCAGTGGCTCCACAGCTCAGGACTCATGATCGTGGAGGCCAGCAAAACCAGCAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS CCA 90 bp GGTGCATGTGCAAGTATTGCAGTCTTCCTTCACCACAGAGCCAGGTaGGTACAGAGTCCCGTGAAACTCACAGGGACACTCAGCTGGTGC +
Preference number: 5 (lower is better)
Translates to: GACASIAVFLHHRAR*VQSPVKLTGTLSWC
Trigger: GCACCAGCTGAGTGTCCCTGTGAGTTTCACGGGACTCTGTACCCACCTGGCTCTGTGGTGAAGGAAGACTGCAATACTTGCACATGCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399391.7
ENST00000399397.6
ENST00000498332.5
CDS-3UTR CAA 90 bp CCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCGCTCAGGTTCAGCAGTaGCTGCTCACACGTCCTCTC +
Preference number: 5 (lower is better)
Translates to: PLIPPFTLGQLETESGAGAQVQQ*LLTRPL
Trigger: GAGAGGACGTGTGAGCAGCAACTGCTGAACCTGAGC...GCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CAA 90 bp TCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGGAGTGGGCAACCCTaGACTGGGAGGGAGGGTCTC +
Preference number: 5 (lower is better)
Translates to: STTFNTPIHIGPAGNRKWGSGQP*TGREGL
Trigger: GAGACCCTCCCTCCCAGTCAAGGGTTGCCCACTCCC...CCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CAA 90 bp CAGCCATCTGCAGGCCTGAGTGTTGCAGGTATAGCCCTCTTTCCTTTTACTGTGGCAGGACTCCAGAGGTaGGCAATGTGGCTCCCAGCA +
Preference number: 5 (lower is better)
Translates to: QPSAGLSVAGIALFPFTVAGLQR*AMWLPA
Trigger: TGCTGGGAGCCACATTGCCAACCTCTGGAGTCCTGC...CACAGTAAAAGGAAAGAGGGCTATACCTGCAACACTCAGGCCTGCAGATGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CAA 90 bp AATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGGGCAGAGACACTTGCTaGGATAGGATGGCCACCTTC +
Preference number: 5 (lower is better)
Translates to: NTPIHIGPAGNRKWGWQRGRDTC*DRMATF
Trigger: GAAGGTGGCCATCCTATCCAAGCAAGTGTCTCTGCC...CCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CAA 90 bp AATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGCCCAGGTTGGCACTTTaGCAGTCCAGTACATGGACG +
Preference number: 5 (lower is better)
Translates to: NTPIHIGPAGNRKWGWQRPRLAL*QSSTWT
Trigger: CGTCCATGTACTGGACTGCAAAAGTGCCAACCTGGG...CCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CAA 90 bp AGCTGTGGTTCCCATGTAAGCACCATGCACCTTCCCATCTTCCCACAGCTCTCATGGGCCTTGCTGGTTTaGCTGGCCTCCACGATCATG +
Preference number: 5 (lower is better)
Translates to: SCGSHVSTMHLPIFPQLSWALLV*LASTIM
Trigger: CATGATCGTGGAGGCCAGCAAAACCAGCAAGGCCCA...TGAGAGCTGTGGGAAGATGGGAAGGTGCATGGTGCTTACATGGGAACCACAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CAA 90 bp TTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGACAGGCCACACTGCACTaGGGGACAGCGGAAGTTCTC +
Preference number: 5 (lower is better)
Translates to: LIPPFTLGQLETESGAGRQATLH*GTAEVL
Trigger: GAGAACTTCCGCTGTCCCCAAGTGCAGTGTGGCCTG...TCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CAA 90 bp CTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGCCCACGACTGTAGCCTaGTCCCCCATGGCAAGGGTC +
Preference number: 5 (lower is better)
Translates to: LPPLIPPFTLGQLETESGPTTVA*SPMARV
Trigger: GACCCTTGCCATGGGGGACAAGGCTACAGTCGTGGG...CCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CAA 90 bp ATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTCCACACTGCGGGTCATaGTGTACCTGGATGGAGAAG +
Preference number: 5 (lower is better)
Translates to: IPPFTLGQLETESGAGRGPHCGS*CTWMEK
Trigger: CTTCTCCATCCAGGTACACAATGACCCGCAGTGTGG...ACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CAA 90 bp AACCTTATGTTCATGCCCTTCGGTTCCACGTGGCACAAAGTGGCACAGGGGGTGTTGACCAGGTGCACTTaGCATGCCCCCACGAAGTCA +
Preference number: 5 (lower is better)
Translates to: NLMFMPFGSTWHKVAQGVLTRCT*HAPTKS
Trigger: TGACTTCGTGGGGGCATGCAAAGTGCACCTGGTCAA...CACCCCCTGTGCCACTTTGTGCCACGTGGAACCGAAGGGCATGAACATAAGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CAA 90 bp TACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTGTTCACACACTCGTACTaGGCGCAGCCACACACATTC +
Preference number: 5 (lower is better)
Translates to: YPHSHWASWKQKVGLAEVFTHSY*AQPHTF
Trigger: GAATGTGTGTGGCTGCGCCAAGTACGAGTGTGTGAA...CACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CAA 90 bp AATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGACGGAACCCCCAACCTaGGCACACTCAGTCTCATTG +
Preference number: 5 (lower is better)
Translates to: NTPIHIGPAGNRKWGWQRTEPPT*AHSVSL
Trigger: CAATGAGACTGAGTGTGCCAAGGTTGGGGGTTCCGT...CCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CAA 90 bp AGCTGTGGTTCCCATGTAAGCACCATGCACCTTCCCATCTTCCCACAGCTCTCATGCCTGCTGGGAAGGTaGCCTTGGGGTAAGGGTACA +
Preference number: 5 (lower is better)
Translates to: SCGSHVSTMHLPIFPQLSCLLGR*PWGKGT
Trigger: TGTACCCTTACCCCAAGGCAACCTTCCCAGCAGGCA...TGAGAGCTGTGGGAAGATGGGAAGGTGCATGGTGCTTACATGGGAACCACAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CAA 90 bp GGGTCCAGCTGTGGTTCCCATGTAAGCACCATGCACCTTCCCATCTTCCCACAGGACTCTGTCATGGCCTaGGAGAAAAGGCACACTGCA +
Preference number: 5 (lower is better)
Translates to: GSSCGSHVSTMHLPIFPQDSVMA*EKRHTA
Trigger: TGCAGTGTGCCTTTTCTCCAAGGCCATGACAGAGTC...CTGTGGGAAGATGGGAAGGTGCATGGTGCTTACATGGGAACCACAGCTGGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS TCA 90 bp TCTCTGTGGATAGCACTATCTCCAAGCTCCTGGTTGCAAGGGGACTaGCAGGAACCTGTTCTGCTGCTGTTCCAGCCACAGTTAGAGGGG +
Preference number: 5 (lower is better)
Translates to: SLWIALSPSSWLQGD*QEPVLLLFQPQLEG
Trigger: CCCCTCTAACTGTGGCTGGAACAGCAGCAGAACAGGTTCCTGTCAGTCCCCTTGCAACCAGGAGCTTGGAGATAGTGCTATCCACAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS TCA 90 bp CTGAGGGAGTCAGGATCATGTACATGTGGCCTGTGTCCTCAATTCTaGATCCATACCTGCTCACCGGTGGCCACACAGGCTGCAAGTCCA +
Preference number: 5 (lower is better)
Translates to: LRESGSCTCGLCPQF*IHTCSPVATQAASP
Trigger: TGGACTTGCAGCCTGTGTGGCCACCGGTGAGCAGGTATGGATTCAGAATTGAGGACACAGGCCACATGTACATGATCCTGACTCCCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS GCA 90 bp TTCACACACTCGTACTTGGCGCAGCCACACACATTCTCCACGCTGTaGATGAACTCCTCATCCAGCTGGGATTTCTCCCACAGATGGCAC +
Preference number: 5 (lower is better)
Translates to: FTHSYLAQPHTFSTL*MNSSSSWDFSHRWH
Trigger: GTGCCATCTGTGGGAGAAATCCCAGCTGGATGAGGAGTTCATGCACAGCGTGGAGAATGTGTGTGGCTGCGCCAAGTACGAGTGTGTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS CCA 90 bp CACCCTCTGCAGAACCATACATGGAAGTGGGCAGAGACACTTGCTTaGATAGGATGGCCACCTTCCCTGTGGTGCTCTTTCGTGGGACAA +
Preference number: 5 (lower is better)
Translates to: HPLQNHTWKWAETLA*IGWPPSLWCSFVGQ
Trigger: TTGTCCCACGAAAGAGCACCACAGGGAAGGTGGCCATCCTATCCAAGCAAGTGTCTCTGCCCACTTCCATGTATGGTTCTGCAGAGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS CCA 90 bp GTTTTGCTGGCCTCCACGATCATGAGTCCTGAGCTGTGGAGCCACTaGATCTGGATGTCTGAGGGAGTCAGGATCATGTACATGTGGCCT +
Preference number: 5 (lower is better)
Translates to: VLLASTIMSPELWSH*IWMSEGVRIMYMWP
Trigger: AGGCCACATGTACATGATCCTGACTCCCTCAGACATCCAGATCCAGTGGCTCCACAGCTCAGGACTCATGATCGTGGAGGCCAGCAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS CCA 90 bp CGGATCTCAAAGGCATCATCTGTGTATGGCGGGATGATCTTGTACTaGTCAAACAGAAGGACATCCCCTGCCTGGGTCAGGGTCACCTGC +
Preference number: 5 (lower is better)
Translates to: RISKASSVYGGMILY*SNRRTSPAWVRVTC
Trigger: GCAGGTGACCCTGACCCAGGCAGGGGATGTCCTTCTGTTTGACCAGTACAAGATCATCCCGCCATACACAGATGATGCCTTTGAGATCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399391.7
ENST00000399397.6
ENST00000498332.5
CDS-3UTR CAA 90 bp TTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGTCATGGGCCTTGGCCTaGTACAGAGCAGCTGTCAGC +
Preference number: 5 (lower is better)
Translates to: FNTPIHIGPAGNRKWGWQSWALA*YRAAVS
Trigger: GCTGACAGCTGCTCTGTACAAGGCCAAGGCCCATGA...CTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CAA 90 bp CCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTTCTGGGTCATGGGCCTaGGCCTTGTACAGAGCAGCT +
Preference number: 5 (lower is better)
Translates to: PPLIPPFTLGQLETESGASGSWA*ALYRAA
Trigger: AGCTGCTCTGTACAAGGCCAAGGCCCATGACCCAGA...AGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CAA 90 bp TCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGAGGGAGGGTCTCATaGCCAAGGGCCTCTGTGGGA +
Preference number: 5 (lower is better)
Translates to: STTFNTPIHIGPAGNRKWGGRVS*PRASVG
Trigger: TCCCACAGAGGCCCTTGGCAATGAGACCCTCCCTCC...CCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CAA 90 bp TCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGTGATGACAGAGGCTTaGGGGCCGGGTGTGGCCACT +
Preference number: 5 (lower is better)
Translates to: STTFNTPIHIGPAGNRKWVMTEA*GPGVAT
Trigger: AGTGGCCACACCCGGCCCCAAAGCCTCTGTCATCAC...CCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CAA 90 bp CCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTTCAGGTCAGGGAAGATaGAGCACCGGCAGGCACACT +
Preference number: 5 (lower is better)
Translates to: PPLIPPFTLGQLETESGASGQGR*STGRHT
Trigger: AGTGTGCCTGCCGGTGCTCAATCTTCCCTGACCTGA...AGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CAA 90 bp CAGATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGACCATGGCCCTGGGCCTaGCTGGTTTTGCTGGCCTCC +
Preference number: 5 (lower is better)
Translates to: QISTTFNTPIHIGPAGNRPWPWA*LVLLAS
Trigger: GGAGGCCAGCAAAACCAGCAAGGCCCAGGGCCATGG...TCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAATCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CAA 90 bp CCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCCCACACTGCGGGTCATaGTGTACCTGGATGGAGAAG +
Preference number: 5 (lower is better)
Translates to: PLIPPFTLGQLETESGAGPHCGS*CTWMEK
Trigger: CTTCTCCATCCAGGTACACAATGACCCGCAGTGTGG...GCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CAA 90 bp AGGCTGCTGCCCCTGGACCTAAAGCCCATTTTCCATCTCAAACCAGGGACAGAGGTAAAGGCCTTCTCCTaGCAGTGCACAGTGCATTGC +
Preference number: 5 (lower is better)
Translates to: RLLPLDLKPIFHLKPGTEVKAFS*QCTVHC
Trigger: GCAATGCACTGTGCACTGCAAGGAGAAGGCCTTTAC...CTCTGTCCCTGGTTTGAGATGGAAAATGGGCTTTAGGTCCAGGGGCAGCAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CAA 90 bp CAGGGCAGTGCTGGGGCCTGCACAACCTTATGTTCATGCCCTTCGGTTCCACGTTATGGCGGGATGATCTaGTACTGGTCAAACAGAAGG +
Preference number: 5 (lower is better)
Translates to: QGSAGACTTLCSCPSVPRYGGMI*YWSNRR
Trigger: CCTTCTGTTTGACCAGTACAAGATCATCCCGCCATA...ACGTGGAACCGAAGGGCATGAACATAAGGTTGTGCAGGCCCCAGCACTGCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CAA 90 bp ATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTTTCACACACTCGTACTaGGCGCAGCCACACACATTC +
Preference number: 5 (lower is better)
Translates to: IPPFTLGQLETESGAGRGFTHSY*AQPHTF
Trigger: GAATGTGTGTGGCTGCGCCAAGTACGAGTGTGTGAA...ACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CAA 90 bp ATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTCTCCTGCATTCATTCTaGCGGATGGTCATGCGGATG +
Preference number: 5 (lower is better)
Translates to: IPPFTLGQLETESGAGRGLLHSF*RMVMRM
Trigger: CATCCGCATGACCATCCGCAAGAATGAATGCAGGAG...ACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS CCA 90 bp AGCCACTGGATCTGGATGTCTGAGGGAGTCAGGATCATGTACATGTaGCCTGTGTCCTCAATTCTGAATCCATACCTGCTCACCGGTGGC +
Preference number: 5 (lower is better)
Translates to: SHWIWMSEGVRIMYM*PVSSILNPYLLTGG
Trigger: GCCACCGGTGAGCAGGTATGGATTCAGAATTGAGGACACAGGCCACATGTACATGATCCTGACTCCCTCAGACATCCAGATCCAGTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CAA 90 bp CCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCTCACAGTCACCCTTGTaGTCTCCATGGCACCTGACA +
Preference number: 5 (lower is better)
Translates to: PLIPPFTLGQLETESGAGSQSPL*SPWHLT
Trigger: TGTCAGGTGCCATGGAGACAACAAGGGTGACTGTGA...GCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CAA 90 bp CAGATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAGGTGTCAGCACAGCCTaGTGGGATCCCGAGGAGGTG +
Preference number: 5 (lower is better)
Translates to: QISTTFNTPIHIGPAGNRGVSTA*WDPEEV
Trigger: CACCTCCTCGGGATCCCACAAGGCTGTGCTGACACC...TCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAATCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CAA 90 bp CCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTCAGGTGGTGGATGTATaGGCCTCAGTGGTAGTTGCC +
Preference number: 5 (lower is better)
Translates to: PPLIPPFTLGQLETESGAQVVDV*ASVVVA
Trigger: GGCAACTACCACTGAGGCCAATACATCCACCACCTG...AGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CAA 90 bp TCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGCACTGAAGGTGCGGTaGGACACCATGCGAAGGCAG +
Preference number: 5 (lower is better)
Translates to: STTFNTPIHIGPAGNRKWALKVR*DTMRRQ
Trigger: CTGCCTTCGCATGGTGTCCAACCGCACCTTCAGTGC...CCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CAA 90 bp ACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCCATGACATGTGGCAGTaGGACCCTCATGCCTCCATG +
Preference number: 5 (lower is better)
Translates to: TTFNTPIHIGPAGNRKWGHDMWQ*DPHASM
Trigger: CATGGAGGCATGAGGGTCCAACTGCCACATGTCATG...GCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CAA 90 bp CAGATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAGCAGTGCACAGTGCATaGCCGGAGCTGGGTCCTCCA +
Preference number: 5 (lower is better)
Translates to: QISTTFNTPIHIGPAGNRAVHSA*PELGPP
Trigger: TGGAGGACCCAGCTCCGGCAATGCACTGTGCACTGC...TCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAATCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CAA 90 bp ACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGAAGTCATCCTGCGTGTaGCCATTGAAGGTGCCGCAG +
Preference number: 5 (lower is better)
Translates to: TFNTPIHIGPAGNRKWGWKSSCV*PLKVPQ
Trigger: CTGCGGCACCTTCAATGGCAACACGCAGGATGACTT...CCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CAA 90 bp CAACCTTATGTTCATGCCCTTCGGTTCCACGTGGCACAAAGTGGCACAGGGGGTGGAATTGCCAAAAAGTaGTGGGGTGCTCTCAGGTAC +
Preference number: 5 (lower is better)
Translates to: QPYVHALRFHVAQSGTGGGIAKK*WGALRY
Trigger: GTACCTGAGAGCACCCCACAACTTTTTGGCAATTCC...ACCCCCTGTGCCACTTTGTGCCACGTGGAACCGAAGGGCATGAACATAAGGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CAA 90 bp ACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTTGACCAGGTGCACTTaGCATGCCCCCACGAAGTCA +
Preference number: 5 (lower is better)
Translates to: TTFNTPIHIGPAGNRKWGLTRCT*HAPTKS
Trigger: TGACTTCGTGGGGGCATGCAAAGTGCACCTGGTCAA...GCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CAA 90 bp TTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAACGGAACCCCCAACCTaGGCACACTCAGTCTCATTG +
Preference number: 5 (lower is better)
Translates to: LIPPFTLGQLETESGAGRTEPPT*AHSVSL
Trigger: CAATGAGACTGAGTGTGCCAAGGTTGGGGGTTCCGT...TCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CAA 90 bp AATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGATACCCCCATTCACATaGGGCCAGCTGGAAACAGAA +
Preference number: 5 (lower is better)
Translates to: NTPIHIGPAGNRKWGWQRIPPFT*GQLETE
Trigger: TTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTAT...CCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CAA 90 bp ACTGTGTCTGGTTTCTTGTGTAGTCAAAAAGGCCAAGAGAATGGGCCACTGCATCCCCTGTGCTTGGTCTaGGGTCCAGCTGTGGTTCCC +
Preference number: 5 (lower is better)
Translates to: TVSGFLCSQKGQENGPLHPLCLV*GPAVVP
Trigger: GGGAACCACAGCTGGACCCAAGACCAAGCACAGGGG...ATGCAGTGGCCCATTCTCTTGGCCTTTTTGACTACACAAGAAACCAGACACAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS CCA 90 bp CTCAAACACCTCACTGAGCAGGATGCTGCACTCCTTCTTGGCAAATaGTTCTCGGAGAGGATTCAGGACACACATATCCCGAGGATCGAG +
Preference number: 5 (lower is better)
Translates to: LKHLTEQDAALLLGK*FSERIQDTHIPRIE
Trigger: CTCGATCCTCGGGATATGTGTGTCCTGAATCCTCTCCGAGAACCATTTGCCAAGAAGGAGTGCAGCATCCTGCTCAGTGAGGTGTTTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS CCA 90 bp GTTGGCACTTTTGCAGTCCAGTACATGGACGGTGAGCATTTCATCTaGGCTCTGGCTGAGGATGTAGATGGCCTCCTTGAACAGAGCTAC +
Preference number: 5 (lower is better)
Translates to: VGTFAVQYMDGEHFI*ALAEDVDGLLEQSY
Trigger: GTAGCTCTGTTCAAGGAGGCCATCTACATCCTCAGCCAGAGCCCAGATGAAATGCTCACCGTCCATGTACTGGACTGCAAAAGTGCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CAA 90 bp CCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCATGCTGCACTCCTTCTaGGCAAATGGTTCTCGGAGA +
Preference number: 5 (lower is better)
Translates to: PLIPPFTLGQLETESGAGMLHSF*ANGSRR
Trigger: TCTCCGAGAACCATTTGCCAAGAAGGAGTGCAGCAT...GCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CAA 90 bp ACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGTCACAGTCACCCTTGTaGTCTCCATGGCACCTGACA +
Preference number: 5 (lower is better)
Translates to: TFNTPIHIGPAGNRKWGWSQSPL*SPWHLT
Trigger: TGTCAGGTGCCATGGAGACAACAAGGGTGACTGTGA...CCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CAA 90 bp AGGCCTGAGTGTTGCAGGTATAGCCCTCTTTCCTTTTACTGTGTCTGGTTTCTTCGGACTGTCACAGCCTaGGTCATGAGCGGGAAGCGA +
Preference number: 5 (lower is better)
Translates to: RPECCRYSPLSFYCVWFLRTVTA*VMSGKR
Trigger: TCGCTTCCCGCTCATGACCAAGGCTGTGACAGTCCG...AAGAAACCAGACACAGTAAAAGGAAAGAGGGCTATACCTGCAACACTCAGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CAA 90 bp CAACCTTATGTTCATGCCCTTCGGTTCCACGTGGCACAAAGTGGCACAGGGGGTACAGTCACCTTTCGGTaGAAGCGATCAATAGTGACC +
Preference number: 5 (lower is better)
Translates to: QPYVHALRFHVAQSGTGGTVTFR*KRSIVT
Trigger: GGTCACTATTGATCGCTTCAACCGAAAGGTGACTGT...ACCCCCTGTGCCACTTTGTGCCACGTGGAACCGAAGGGCATGAACATAAGGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CAA 90 bp ATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGTTATGGCGGGATGATCTaGTACTGGTCAAACAGAAGG +
Preference number: 5 (lower is better)
Translates to: IPPFTLGQLETESGAGRGYGGMI*YWSNRR
Trigger: CCTTCTGTTTGACCAGTACAAGATCATCCCGCCATA...ACCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CAA 90 bp AGGCTGCTGCCCCTGGACCTAAAGCCCATTTTCCATCTCAAACCAGGGACAGAGACATCTGATGTGCTCTaGACCAGGTGCACTTTGCAT +
Preference number: 5 (lower is better)
Translates to: RLLPLDLKPIFHLKPGTETSDVL*TRCTLH
Trigger: ATGCAAAGTGCACCTGGTCAAGAGCACATCAGATGT...CTCTGTCCCTGGTTTGAGATGGAAAATGGGCTTTAGGTCCAGGGGCAGCAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CAA 90 bp AATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGACATCTGATGTGCTCTaGACCAGGTGCACTTTGCAT +
Preference number: 5 (lower is better)
Translates to: NTPIHIGPAGNRKWGWQRTSDVL*TRCTLH
Trigger: ATGCAAAGTGCACCTGGTCAAGAGCACATCAGATGT...CCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CAA 90 bp ATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTCAGTGCAGGCGCACTaGGCCTCCGGGATGCAGAGT +
Preference number: 5 (lower is better)
Translates to: ISTTFNTPIHIGPAGNRKSVQAH*ASGMQS
Trigger: ACTCTGCATCCCGGAGGCCAAGTGCGCCTGCACTGA...CTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CAA 90 bp CTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCACACTCAGTCTCATaGAGCGGTGGGCAGCTTATG +
Preference number: 5 (lower is better)
Translates to: LPPLIPPFTLGQLETESGAHSVS*SGGQLM
Trigger: CATAAGCTGCCCACCGCTCAATGAGACTGAGTGTGC...CCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CAA 90 bp AAAGGCCAAGAGAATGGGCCACTGCATCCTGCCCCTGTGCTTGGTCTTGGGTCCACTGTGTCTGGTTTCTaGTGTAGTCAAAAAGGCCAA +
Preference number: 5 (lower is better)
Translates to: KGQENGPLHPAPVLGLGSTVSGF*CSQKGQ
Trigger: TTGGCCTTTTTGACTACACAAGAAACCAGACACAGT...GGACCCAAGACCAAGCACAGGGGCAGGATGCAGTGGCCCATTCTCTTGGCCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CAA 90 bp GGCCCTAGAATCCACCATCTTTGTCTTTGGGAACTCCTTCTGGGCAGCCATCTGACCAGGCACCTTTCTTaGGACTACAGGAGATGCGAA +
Preference number: 5 (lower is better)
Translates to: GPRIHHLCLWELLLGSHLTRHLS*DYRRCE
Trigger: TTCGCATCTCCTGTAGTCCAAAGAAAGGTGCCTGGT...CAGATGGCTGCCCAGAAGGAGTTCCCAAAGACAAAGATGGTGGATTCTAGGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS GCA 90 bp AAATGCACCAGTGTGAAAAATCCCACTCGCCATGTGTGGACCTCCTaGTTGTCATCCAGGAAGCTCTCTGGACTAGGATTTCCGGAGTCA +
Preference number: 5 (lower is better)
Translates to: KCTSVKNPTRHVWTS*LSSRKLSGLGFPES
Trigger: TGACTCCGGAAATCCTAGTCCAGAGAGCTTCCTGGATGACAAGCAGGAGGTCCACACATGGCGAGTGGGATTTTTCACACTGGTGCATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS CCA 90 bp TCCTGTGGGAAATGCACCAGTGTGAAAAATCCCACTCGCCATGTGTaGACCTCCTGCTTGTCATCCAGGAAGCTCTCTGGACTAGGATTT +
Preference number: 5 (lower is better)
Translates to: SCGKCTSVKNPTRHV*TSCLSSRKLSGLGF
Trigger: AAATCCTAGTCCAGAGAGCTTCCTGGATGACAAGCAGGAGGTCCACACATGGCGAGTGGGATTTTTCACACTGGTGCATTTCCCACAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CAA 90 bp CAGATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAGCTCAGGTTCAGCAGTaGCTGCTCACACGTCCTCTC +
Preference number: 5 (lower is better)
Translates to: QISTTFNTPIHIGPAGNRAQVQQ*LLTRPL
Trigger: GAGAGGACGTGTGAGCAGCAACTGCTGAACCTGAGC...TCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAATCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CAA 90 bp AGGCCTGAGTGTTGCAGGTATAGCCCTCTTTCCTTTTACTGTGTCTGGTTTCTTTCAGGTCAGGGAAGATaGAGCACCGGCAGGCACACT +
Preference number: 5 (lower is better)
Translates to: RPECCRYSPLSFYCVWFLSGQGR*STGRHT
Trigger: AGTGTGCCTGCCGGTGCTCAATCTTCCCTGACCTGA...AAGAAACCAGACACAGTAAAAGGAAAGAGGGCTATACCTGCAACACTCAGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CAA 90 bp AGATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAACCATCCTGGCATGTCTaGGGTGGCTCACAGGCTGTC +
Preference number: 5 (lower is better)
Translates to: RFLPPLIPPFTLGQLETEPSWHV*GGSQAV
Trigger: GACAGCCTGTGAGCCACCCAAGACATGCCAGGATGG...TTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CAA 90 bp TTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGTCACCAGATCATCCTaGGGGTCAGCATTGTTGTTC +
Preference number: 5 (lower is better)
Translates to: LIPPFTLGQLETESGAGRVTRSS*GSALLF
Trigger: GAACAACAATGCTGACCCCAAGGATGATCTGGTGAC...TCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CAA 90 bp ACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGGTCACCAGATCATCCTaGGGGTCAGCATTGTTGTTC +
Preference number: 5 (lower is better)
Translates to: TFNTPIHIGPAGNRKWGWVTRSS*GSALLF
Trigger: GAACAACAATGCTGACCCCAAGGATGATCTGGTGAC...CCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CAA 90 bp CAGCCATCTGCAGGCCTGAGTGTTGCAGGTATAGCCCTCTTTCCTTTTACTGTGATACCCCCATTCACATaGGGCCAGCTGGAAACAGAA +
Preference number: 5 (lower is better)
Translates to: QPSAGLSVAGIALFPFTVIPPFT*GQLETE
Trigger: TTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTAT...CACAGTAAAAGGAAAGAGGGCTATACCTGCAACACTCAGGCCTGCAGATGGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CAA 90 bp AATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGCAGAGGGGGGTCCTCATCTCATaGATGGTTTTTAAGTCAAAG +
Preference number: 5 (lower is better)
Translates to: NTPIHIGPAGNRKWGWQRGVLIS*MVFKSK
Trigger: CTTTGACTTAAAAACCATCAATGAGATGAGGACCCC...CCTCTGCCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CAA 90 bp ATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTCTGGGTCATGGGCCTaGGCCTTGTACAGAGCAGCT +
Preference number: 5 (lower is better)
Translates to: ISTTFNTPIHIGPAGNRKSGSWA*ALYRAA
Trigger: AGCTGCTCTGTACAAGGCCAAGGCCCATGACCCAGA...CTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CAA 90 bp ACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTGGGGCTGGACAGTCACCTTTCGGTaGAAGCGATCAATAGTGACC +
Preference number: 5 (lower is better)
Translates to: TFNTPIHIGPAGNRKWGWTVTFR*KRSIVT
Trigger: GGTCACTATTGATCGCTTCAACCGAAAGGTGACTGT...CCAGCCCCACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CAA 90 bp TTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGTACCGGGGCACCGGGATaGTGTCACAGTCACATTCAC +
Preference number: 5 (lower is better)
Translates to: FLPPLIPPFTLGQLETESTGAPG*CHSHIH
Trigger: GTGAATGTGACTGTGACACAATCCCGGTGCCCCGGT...ACTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CAA 90 bp GGCCCTAGAATCCACCATCTTTGTCTTTGGGAACTCCTTCTGGGCAGCCATCTGGGGGTCCTCATCTCATaGATGGTTTTTAAGTCAAAG +
Preference number: 5 (lower is better)
Translates to: GPRIHHLCLWELLLGSHLGVLIS*MVFKSK
Trigger: CTTTGACTTAAAAACCATCAATGAGATGAGGACCCC...CAGATGGCTGCCCAGAAGGAGTTCCCAAAGACAAAGATGGTGGATTCTAGGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CAA 90 bp AGATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAACATGACATGTGGCAGTaGGACCCTCATGCCTCCATG +
Preference number: 5 (lower is better)
Translates to: RFLPPLIPPFTLGQLETEHDMWQ*DPHASM
Trigger: CATGGAGGCATGAGGGTCCAACTGCCACATGTCATG...TTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CAA 90 bp ATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGAAGTCATCCTGCGTGTaGCCATTGAAGGTGCCGCAG +
Preference number: 5 (lower is better)
Translates to: ISTTFNTPIHIGPAGNRKKSSCV*PLKVPQ
Trigger: CTGCGGCACCTTCAATGGCAACACGCAGGATGACTT...CTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CAA 90 bp AGCTGTGGTTCCCATGTAAGCACCATGCACCTTCCCATCTTCCCACAGCTCTCACCCTTACCTAGCACTTaGTTAAAGAAGTCACAGTCA +
Preference number: 5 (lower is better)
Translates to: SCGSHVSTMHLPIFPQLSPLPST*LKKSQS
Trigger: TGACTGTGACTTCTTTAACAAAGTGCTAGGTAAGGG...TGAGAGCTGTGGGAAGATGGGAAGGTGCATGGTGCTTACATGGGAACCACAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CAA 90 bp ATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAAGAGATCACAGTCACCCTaGTTGTCTCCATGGCACCTG +
Preference number: 5 (lower is better)
Translates to: ISTTFNTPIHIGPAGNRKRSQSP*LSPWHL
Trigger: CAGGTGCCATGGAGACAACAAGGGTGACTGTGATCT...CTTTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CAA 90 bp AGATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAGTAAAGGCCTTCTCCTaGCAGTGCACAGTGCATTGC +
Preference number: 5 (lower is better)
Translates to: RFLPPLIPPFTLGQLETEVKAFS*QCTVHC
Trigger: GCAATGCACTGTGCACTGCAAGGAGAAGGCCTTTAC...TTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CAA 90 bp TCCATGCTCAACACGTGCCAGATTTCTACCACCTTTAATACCCCCATTCACATTCTCCTGCATTCATTCTaGCGGATGGTCATGCGGATG +
Preference number: 5 (lower is better)
Translates to: SMLNTCQISTTFNTPIHILLHSF*RMVMRM
Trigger: CATCCGCATGACCATCCGCAAGAATGAATGCAGGAG...AATGTGAATGGGGGTATTAAAGGTGGTAGAAATCTGGCACGTGTTGAGCATGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CAA 90 bp AGATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAACTGATTTCACAGATCTaGGTGAGACAACCTGGGCCC +
Preference number: 5 (lower is better)
Translates to: RFLPPLIPPFTLGQLETELISQI*VRQPGP
Trigger: GGGCCCAGGTTGTCTCACCAAGATCTGTGAAATCAG...TTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS-3UTR CAA 90 bp AGATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGAAGGAATTGCCAAAAAGTaGTGGGGTGCTCTCAGGTAC +
Preference number: 5 (lower is better)
Translates to: RFLPPLIPPFTLGQLETEGIAKK*WGALRY
Trigger: GTACCTGAGAGCACCCCACAACTTTTTGGCAATTCC...TTCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS TCA 90 bp GCTCTCTGGACTAGGATTTCCGGAGTCATCATCAAAGACAATGAGTaGGTTCCCAACGTTGATGGAAATAAATTTCCTGCAGATCATGCC +
Preference number: 5 (lower is better)
Translates to: ALWTRISGVIIKDNE*VPNVDGNKFPADHA
Trigger: GGCATGATCTGCAGGAAATTTATTTCCATCAACGTTGGGAACTCACTCATTGTCTTTGATGATGACTCCGGAAATCCTAGTCCAGAGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS-3UTR CAA 90 bp CAGATTTCTACCACCTTTAATACCCCCATTCACATTGGGCCAGCTGGAAACAGACCCTTACCTAGCACTTaGTTAAAGAAGTCACAGTCA +
Preference number: 5 (lower is better)
Translates to: QISTTFNTPIHIGPAGNRPLPST*LKKSQS
Trigger: TGACTGTGACTTCTTTAACAAAGTGCTAGGTAAGGG...TCTGTTTCCAGCTGGCCCAATGTGAATGGGGGTATTAAAGGTGGTAGAAATCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS GCA 72 bp CCGGAGCTGGGTCCTCCAGCCTTGCAAGGGCCGCCCTaGCTGGGCACACGCCCGGGCATACTCCGCCAGTGC +
Preference number: 6 (lower is better)
Translates to: PELGPPALQGPP*LGTRPGILRQC
Trigger: GCACTGGCGGAGTATGCCCGGGCGTGTGCCCAGGCAGGGCGGCCCTTGCAAGGCTGGAGGACCCAGCTCCGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399391.7
ENST00000399397.6
ENST00000498332.5
CDS CCA 72 bp AGCTGGGTCCTCCAGCCTTGCAAGGGCCGCCCTGCCTaGGCACACGCCCGGGCATACTCCGCCAGTGCCCGG +
Preference number: 6 (lower is better)
Translates to: SWVLQPCKGRPA*AHARAYSASAR
Trigger: CCGGGCACTGGCGGAGTATGCCCGGGCGTGTGCCCAGGCAGGGCGGCCCTTGCAAGGCTGGAGGACCCAGCT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399391.7
ENST00000399397.6
ENST00000498332.5
CDS GCA 72 bp TGGGAGAGCGGACCAGCACGGCACCCAGGGGCGTGCTaGTGCAGTGGTGGCGGGCGCAGTCTGCGATCCAGG +
Preference number: 6 (lower is better)
Translates to: WESGPARHPGAC*CSGGGRSLRSR
Trigger: CCTGGATCGCAGACTGCGCCCGCCACCACTGCAGCAGCACGCCCCTGGGTGCCGTGCTGGTCCGCTCTCCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS GCA 72 bp GAGAGCGGACCAGCACGGCACCCAGGGGCGTGCTGCTaGAGTGGTGGCGGGCGCAGTCTGCGATCCAGGATG +
Preference number: 6 (lower is better)
Translates to: ESGPARHPGACC*SGGGRSLRSRM
Trigger: CATCCTGGATCGCAGACTGCGCCCGCCACCACTGCAGCAGCACGCCCCTGGGTGCCGTGCTGGTCCGCTCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS CCA 72 bp GGAGTGGGTGTGGCTGTGGGGAGGCAGGCGAGCCCATaGGCTGGCTGTGCCCGGCTTCGCCCTTCTCTGTGG +
Preference number: 6 (lower is better)
Translates to: GVGVAVGRQASP*AGCARLRPSLW
Trigger: CCACAGAGAAGGGCGAAGCCGGGCACAGCCAGCCCATGGGCTCGCCTGCCTCCCCACAGCCACACCCACTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS CCA 72 bp GCTCCCTCGGGCTCAGCCACCAAGGGCGTGAGAGGGTaGCTCGTAGCAGGCGTGAGCTCTGTGGGCCCACCC +
Preference number: 6 (lower is better)
Translates to: APSGSATKGVRG*LVAGVSSVGPP
Trigger: GGGTGGGCCCACAGAGCTCACGCCTGCTACGAGCCACCCTCTCACGCCCTTGGTGGCTGAGCCCGAGGGAGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS CAA 90 bp CCTGGGTACGTCCCGGCAGCTGGCTGCCCGTGGGTCCCGGCAGGTTaGGAAGCAGGGGCTGGCACAGGCATCGTAGCGCCACTCGCAGAT +
Preference number: 6 (lower is better)
Translates to: PGYVPAAGCPWVPAG*EAGAGTGIVAPLAD
Trigger: ATCTGCGAGTGGCGCTACGATGCCTGTGCCAGCCCCTGCTTCCAAACCTGCCGGGACCCACGGGCAGCCAGCTGCCGGGACGTACCCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS CAA 90 bp CTCCTTGCAGTGCACAGTGCATTGCCGGAGCTGGGTCCTCCAGCCTaGCAAGGGCCGCCCTGCCTGGGCACACGCCCGGGCATACTCCGC +
Preference number: 6 (lower is better)
Translates to: LLAVHSALPELGPPA*QGPPCLGTRPGILR
Trigger: GCGGAGTATGCCCGGGCGTGTGCCCAGGCAGGGCGGCCCTTGCAAGGCTGGAGGACCCAGCTCCGGCAATGCACTGTGCACTGCAAGGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399391.7
ENST00000399397.6
ENST00000498332.5
CDS TCA 72 bp GGGACTCCGTGGGGCCGGCGGGGAGTTGAGATGCAGTaGGCTCCAGTGGCTGCTGCAGGGTGGTCTGGGTGG +
Preference number: 6 (lower is better)
Translates to: GTPWGRRGVEMQ*APVAAAGWSGW
Trigger: CCACCCAGACCACCCTGCAGCAGCCACTGGAGCTCACTGCATCTCAACTCCCCGCCGGCCCCACGGAGTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS GCA 72 bp GGCCTCGTCCACCGGCTCTGCTGCCAGGTGAGGCCCTaGCGAGGTTCCATGGGCCTCAGCCAGCTGAGGCAA +
Preference number: 6 (lower is better)
Translates to: GLVHRLCCQVRP*RGSMGLSQLRQ
Trigger: TTGCCTCAGCTGGCTGAGGCCCATGGAACCTCGGCAGGGCCTCACCTGGCAGCAGAGCCGGTGGACGAGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS GCA 72 bp CAGGGGCGTGCTGCTGCAGTGGTGGCGGGCGCAGTCTaGGATCCAGGATGCCCCGGGCAAGAACAGGGAGGT +
Preference number: 6 (lower is better)
Translates to: QGRAAAVVAGAV*DPGCPGQEQGG
Trigger: ACCTCCCTGTTCTTGCCCGGGGCATCCTGGATCGCAGACTGCGCCCGCCACCACTGCAGCAGCACGCCCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS CCA 72 bp GGGTGTGGCTGTGGGGAGGCAGGCGAGCCCATGGGCTaGCTGTGCCCGGCTTCGCCCTTCTCTGTGGATAGC +
Preference number: 6 (lower is better)
Translates to: GCGCGEAGEPMG*LCPASPFSVDS
Trigger: GCTATCCACAGAGAAGGGCGAAGCCGGGCACAGCCAGCCCATGGGCTCGCCTGCCTCCCCACAGCCACACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS CCA 72 bp TCAGGGCTGGGGCTGAGCGCCCAGATGGTTCTGTGGTaGCCTCGTCCACCGGCTCTGCTGCCAGGTGAGGCC +
Preference number: 6 (lower is better)
Translates to: SGLGLSAQMVLW*PRPPALLPGEA
Trigger: GGCCTCACCTGGCAGCAGAGCCGGTGGACGAGGCCACCACAGAACCATCTGGGCGCTCAGCCCCAGCCCTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS TCA 72 bp GGGACAGGCGCAGCCCGAGAGGCAGGGGCCACGGGCTaGCACGCTCAGGTTCAGCAGTTGCTGCTCACACGT +
Preference number: 6 (lower is better)
Translates to: GTGAAREAGATG*HAQVQQLLLTR
Trigger: ACGTGTGAGCAGCAACTGCTGAACCTGAGCGTGTCAGCCCGTGGCCCCTGCCTCTCGGGCTGCGCCTGTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS GCA 72 bp ACAGCCTTCTACCCTGGGTACGTCCCGGCAGCTGGCTaGCCGTGGGTCCCGGCAGGTTTGGAAGCAGGGGCT +
Preference number: 6 (lower is better)
Translates to: TAFYPGYVPAAG*PWVPAGLEAGA
Trigger: AGCCCCTGCTTCCAAACCTGCCGGGACCCACGGGCAGCCAGCTGCCGGGACGTACCCAGGGTAGAAGGCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS GCA 72 bp GGCTCAGGGCATAGGATGTGGGCACTGGCAGAGCTGTaGCTGCCTGGGCTCCCTCGGGCTCAGCCACCAAGG +
Preference number: 6 (lower is better)
Translates to: GSGHRMWALAEL*LPGLPRAQPPR
Trigger: CCTTGGTGGCTGAGCCCGAGGGAGCCCAGGCAGGCACAGCTCTGCCAGTGCCCACATCCTATGCCCTGAGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS GCA 72 bp CCCAGATGGTTCTGTGGTGGCCTCGTCCACCGGCTCTaGTGCCAGGTGAGGCCCTGCCGAGGTTCCATGGGC +
Preference number: 6 (lower is better)
Translates to: PRWFCGGLVHRL*CQVRPCRGSMG
Trigger: GCCCATGGAACCTCGGCAGGGCCTCACCTGGCAGCAGAGCCGGTGGACGAGGCCACCACAGAACCATCTGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS GCA 72 bp AGCAGCGGTCGGGGCTCCACACCTCCACCAGGGCAGTaGCCAGGCCACACTGCACTTGGGGACAGCGGAAGT +
Preference number: 6 (lower is better)
Translates to: SSGRGSTPPPGQ*PGHTALGDSGS
Trigger: ACTTCCGCTGTCCCCAAGTGCAGTGTGGCCTGGGCACTGCCCTGGTGGAGGTGTGGAGCCCCGACCGCTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS CCA 72 bp CCGGGATGCAGAGTGCAGAGTGGCGCCGGTGTAAGATaGTGCCCTCGGAGCAGACGCAGCCCTCGCCCAGCA +
Preference number: 6 (lower is better)
Translates to: PGCRVQSGAGVR*CPRSRRSPRPA
Trigger: TGCTGGGCGAGGGCTGCGTCTGCTCCGAGGGCACCATCTTACACCGGCGCCACTCTGCACTCTGCATCCCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS CCA 72 bp ACTGTAGCCTTGTCCCCCATGGCAAGGGTCGCCTCCTaGTGGCTGCTGCTGGGTTGCCCGGCTGGCTCTGGC +
Preference number: 6 (lower is better)
Translates to: TVALSPMARVAS*WLLLGCPAGSG
Trigger: GCCAGAGCCAGCCGGGCAACCCAGCAGCAGCCACCAGGAGGCGACCCTTGCCATGGGGGACAAGGCTACAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399397.6
ENST00000498332.5
CDS CCA 72 bp CAGCAGGAGTCCCCCAGGCGGCCCGTGATCAGGATCTaGTCCTGTCGGCAGCTGGGGACCAGCTCTGCCTCA +
Preference number: 6 (lower is better)
Translates to: QQESPRRPVIRI*SCRQLGTSSAS
Trigger: TGAGGCAGAGCTGGTCCCCAGCTGCCGACAGGACCAGATCCTGATCACGGGCCGCCTGGGGGACTCCTGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS CAA 90 bp GGGACTGGGGCAGCCCAGATCCACCGGGACAATGGTGTCTGGGGCTaGGCACTGGTGCTGGCAGCAGCCGCTGAGGGAGCTGTTCCAGGT +
Preference number: 6 (lower is better)
Translates to: GTGAAQIHRDNGVWG*ALVLAAAAEGAVPG
Trigger: ACCTGGAACAGCTCCCTCAGCGGCTGCTGCCAGCACCAGTGCCAAGCCCCAGACACCATTGTCCCGGTGGATCTGGGCTGCCCCAGTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS TCA 72 bp GGTGGTGCAGCGGGAGGTGTGGCACACGCCATCTGCTaGGAGCTCCACCACTGTCTGGCCGGGCTGCATCAC +
Preference number: 6 (lower is better)
Translates to: GGAAGGVAHAIC*ELHHCLAGLHH
Trigger: GTGATGCAGCCCGGCCAGACAGTGGTGGAGCTCTCAGCAGATGGCGTGTGCCACACCTCCCGCTGCACCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS GCA 72 bp GGCTGTGGGGAGGCAGGCGAGCCCATGGGCTGGCTGTaGCCGGCTTCGCCCTTCTCTGTGGATAGCACTATC +
Preference number: 6 (lower is better)
Translates to: GCGEAGEPMGWL*PASPFSVDSTI
Trigger: GATAGTGCTATCCACAGAGAAGGGCGAAGCCGGGCACAGCCAGCCCATGGGCTCGCCTGCCTCCCCACAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS GCA 72 bp GGATGCAGAGTGCAGAGTGGCGCCGGTGTAAGATGGTaGCCTCGGAGCAGACGCAGCCCTCGCCCAGCACCT +
Preference number: 6 (lower is better)
Translates to: GCRVQSGAGVRW*PRSRRSPRPAP
Trigger: AGGTGCTGGGCGAGGGCTGCGTCTGCTCCGAGGGCACCATCTTACACCGGCGCCACTCTGCACTCTGCATCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS GCA 72 bp CTGCAGGAGCCGCAGCAGGCAGCGAGGTCCCGCGGGTaGTCGTACTCCTGGTTCGCCTCACAGTGGATGTCA +
Preference number: 6 (lower is better)
Translates to: LQEPQQAARSRG*SYSWFASQWMS
Trigger: TGACATCCACTGTGAGGCGAACCAGGAGTACGAGCACCCGCGGGACCTCGCTGCCTGCTGCGGCTCCTGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS GCA 72 bp TGTCCCCCATGGCAAGGGTCGCCTCCTGGTGGCTGCTaGTGGAGGAAACACGAGTCTGCGCGGGCCCATTCC +
Preference number: 6 (lower is better)
Translates to: CPPWQGSPPGGC*WRKHESARAHS
Trigger: GGAATGGGCCCGCGCAGACTCGTGTTTCCTCCAGCAGCAGCCACCAGGAGGCGACCCTTGCCATGGGGGACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS GCA 72 bp CCTTGTCCCCCATGGCAAGGGTCGCCTCCTGGTGGCTaGTGCTGGAGGAAACACGAGTCTGCGCGGGCCCAT +
Preference number: 6 (lower is better)
Translates to: PCPPWQGSPPGG*CWRKHESARAH
Trigger: ATGGGCCCGCGCAGACTCGTGTTTCCTCCAGCAGCAGCCACCAGGAGGCGACCCTTGCCATGGGGGACAAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS CCA 72 bp AGGGGCTGGCACAGGCATCGTAGCGCCACTCGCAGATaGGGTAGGCAGCCCCCGAGGGCTTGGCATCCAGAA +
Preference number: 6 (lower is better)
Translates to: RGWHRHRSATRR*GRQPPRAWHPE
Trigger: TTCTGGATGCCAAGCCCTCGGGGGCTGCCTACCCCATCTGCGAGTGGCGCTACGATGCCTGTGCCAGCCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS CCA 72 bp CTGCAGGGTGGTCTGGGTGGGGCCTGGAGACACCACTaGCTCCTCAGTGGCTGTCACTGGTGGGTTCAGGGC +
Preference number: 6 (lower is better)
Translates to: LQGGLGGAWRHH*LLSGCHWWVQG
Trigger: GCCCTGAACCCACCAGTGACAGCCACTGAGGAGCCAGTGGTGTCTCCAGGCCCCACCCAGACCACCCTGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS CCA 72 bp TGGACACCATGCGAAGGCAGGGCGAGCAGTCAGTTGTaGCGCAGCTGTCTGGGCGGAAGCGGGTCTGGCCCA +
Preference number: 6 (lower is better)
Translates to: WTPCEGRASSQL*RSCLGGSGSGP
Trigger: TGGGCCAGACCCGCTTCCGCCCAGACAGCTGCGCCACAACTGACTGCTCGCCCTGCCTTCGCATGGTGTCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS CCA 72 bp CAGGCGCACTTGGCCTCCGGGATGCAGAGTGCAGAGTaGCGCCGGTGTAAGATGGTGCCCTCGGAGCAGACG +
Preference number: 6 (lower is better)
Translates to: QAHLASGMQSAE*RRCKMVPSEQT
Trigger: CGTCTGCTCCGAGGGCACCATCTTACACCGGCGCCACTCTGCACTCTGCATCCCGGAGGCCAAGTGCGCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS CCA 72 bp GCCTTCTCCTTGCAGTGCACAGTGCATTGCCGGAGCTaGGTCCTCCAGCCTTGCAAGGGCCGCCCTGCCTGG +
Preference number: 6 (lower is better)
Translates to: AFSLQCTVHCRS*VLQPCKGRPAW
Trigger: CCAGGCAGGGCGGCCCTTGCAAGGCTGGAGGACCCAGCTCCGGCAATGCACTGTGCACTGCAAGGAGAAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399391.7
ENST00000399397.6
ENST00000498332.5
CDS CCA 72 bp ACTGGGGCAGCCCAGATCCACCGGGACAATGGTGTCTaGGGCTTGGCACTGGTGCTGGCAGCAGCCGCTGAG +
Preference number: 6 (lower is better)
Translates to: TGAAQIHRDNGV*GLALVLAAAAE
Trigger: CTCAGCGGCTGCTGCCAGCACCAGTGCCAAGCCCCAGACACCATTGTCCCGGTGGATCTGGGCTGCCCCAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS CCA 72 bp CCCCCATGGCAAGGGTCGCCTCCTGGTGGCTGCTGCTaGAGGAAACACGAGTCTGCGCGGGCCCATTCCTCA +
Preference number: 6 (lower is better)
Translates to: PPWQGSPPGGCC*RKHESARAHSS
Trigger: TGAGGAATGGGCCCGCGCAGACTCGTGTTTCCTCCAGCAGCAGCCACCAGGAGGCGACCCTTGCCATGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS TCA 72 bp CTCCGCCAAACCCTCTACGATGCTCAGGGCTGGGGCTaGGCGCCCAGATGGTTCTGTGGTGGCCTCGTCCAC +
Preference number: 6 (lower is better)
Translates to: LRQTLYDAQGWG*APRWFCGGLVH
Trigger: GTGGACGAGGCCACCACAGAACCATCTGGGCGCTCAGCCCCAGCCCTGAGCATCGTAGAGGGTTTGGCGGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS GCA 72 bp TCTCCCTGCTCAGCTCCAGGTCCGTGTGCAGGTCGCTaGAGTTCACGAAGACCTGGCCTGCTGGGCAGGCAG +
Preference number: 6 (lower is better)
Translates to: SPCSAPGPCAGR*SSRRPGLLGRQ
Trigger: CTGCCTGCCCAGCAGGCCAGGTCTTCGTGAACTGCAGCGACCTGCACACGGACCTGGAGCTGAGCAGGGAGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS GCA 72 bp GCCTGCCGTGTCCCCCGGTGCAGCAAGAAGGAGGCATaGTGTTGGAAGGTGTCACGGCCCTGCCACTTAGCC +
Preference number: 6 (lower is better)
Translates to: ACRVPRCSKKEA*CWKVSRPCHLA
Trigger: GGCTAAGTGGCAGGGCCGTGACACCTTCCAACAGCATGCCTCCTTCTTGCTGCACCGGGGGACACGGCAGGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS GCA 72 bp CCGGTGGGCAGGCACAGCCCTCCACACACTCGTCTCTaGTCAGGTCATCGCCACCATCAACCCCACAGGCCT +
Preference number: 6 (lower is better)
Translates to: PVGRHSPPHTRL*SGHRHHQPHRP
Trigger: AGGCCTGTGGGGTTGATGGTGGCGATGACCTGAGCAGAGACGAGTGTGTGGAGGGCTGTGCCTGCCCACCGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS CCA 72 bp GAGCCGCCTTTCCCAGGAAGACATGGCCACGGAGTCTaGGGCTTCAGCCTGCTGGCCTCCCACGACTGTAGC +
Preference number: 6 (lower is better)
Translates to: EPPFPGRHGHGV*GFSLLASHDCS
Trigger: GCTACAGTCGTGGGAGGCCAGCAGGCTGAAGCCCCAGACTCCGTGGCCATGTCTTCCTGGGAAAGGCGGCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399391.7
ENST00000399397.6
ENST00000498332.5
CDS CCA 72 bp GTGCCGCAGAGGCCCACGGTATCCTCCACCCATCGCTaGTCCACTTGCAGGTACAGTCGGAGCCCTTCACGG +
Preference number: 6 (lower is better)
Translates to: VPQRPTVSSTHR*STCRYSRSPSR
Trigger: CCGTGAAGGGCTCCGACTGTACCTGCAAGTGGACCAGCGATGGGTGGAGGATACCGTGGGCCTCTGCGGCAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399391.7
ENST00000399397.6
ENST00000498332.5
CDS CCA 72 bp ACCGGGACAATGGTGTCTGGGGCTTGGCACTGGTGCTaGCAGCAGCCGCTGAGGGAGCTGTTCCAGGTCTCC +
Preference number: 6 (lower is better)
Translates to: TGTMVSGAWHWC*QQPLRELFQVS
Trigger: GGAGACCTGGAACAGCTCCCTCAGCGGCTGCTGCCAGCACCAGTGCCAAGCCCCAGACACCATTGTCCCGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS CCA 72 bp TGGCACACGCCATCTGCTGAGAGCTCCACCACTGTCTaGCCGGGCTGCATCACACCCAGCTCGCGGCTCAGA +
Preference number: 6 (lower is better)
Translates to: WHTPSAESSTTV*PGCITPSSRLR
Trigger: TCTGAGCCGCGAGCTGGGTGTGATGCAGCCCGGCCAGACAGTGGTGGAGCTCTCAGCAGATGGCGTGTGCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS CCA 72 bp GTGAGAGGGTCGAGCACGGTGGTGCAGCGGGAGGTGTaGCACACGCCATCTGCTGAGAGCTCCACCACTGTC +
Preference number: 6 (lower is better)
Translates to: VRGSSTVVQREV*HTPSAESSTTV
Trigger: GACAGTGGTGGAGCTCTCAGCAGATGGCGTGTGCCACACCTCCCGCTGCACCACCGTGCTCGACCCTCTCAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS CCA 72 bp ACTTGGCCCGATGGAGCCGCCTTTCCCAGGAAGACATaGCCACGGAGTCTGGGGCTTCAGCCTGGCCTCCCA +
Preference number: 6 (lower is better)
Translates to: TWPDGAAFPRKT*PRSLGLQPGLP
Trigger: TGGGAGGCCAGGCTGAAGCCCCAGACTCCGTGGCCATGTCTTCCTGGGAAAGGCGGCTCCATCGGGCCAAGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428619.1
CDS GCA 72 bp GGCTCCAGGGGAAGCCACAGGTCTGGAGGAGGGACTTaGTGTCAAGGAGGGCTGTGGGGGTGTCGTCCTAAC +
Preference number: 6 (lower is better)
Translates to: GSRGSHRSGGGT*CQGGLWGCRPN
Trigger: GTTAGGACGACACCCCCACAGCCCTCCTTGACAGCAAGTCCCTCCTCCAGACCTGTGGCTTCCCCTGGAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS GCA 72 bp CTGGACAGTCACCACAGGCGCACTTGGCCTCCGGGATaGAGAGTGCAGAGTGGCGCCGGTGTAAGATGGTGC +
Preference number: 6 (lower is better)
Translates to: LDSHHRRTWPPG*RVQSGAGVRWC
Trigger: GCACCATCTTACACCGGCGCCACTCTGCACTCTGCATCCCGGAGGCCAAGTGCGCCTGTGGTGACTGTCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342528.2
CDS GCA 72 bp CCATGCTGTCAGTGCAGGCGCACTTGGCCTCCGGGATaGAGAGTGCAGAGTGGCGCCGGTGTAAGATGGTGC +
Preference number: 6 (lower is better)
Translates to: PCCQCRRTWPPG*RVQSGAGVRWC
Trigger: GCACCATCTTACACCGGCGCCACTCTGCACTCTGCATCCCGGAGGCCAAGTGCGCCTGCACTGACAGCATGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS GCA 72 bp GCATTGGTGGCACAGAAGAGCTGCACAGAGCGCCGCTaGAGGCCCACCTCACGGCAGCACTTGCAGAATCGG +
Preference number: 6 (lower is better)
Translates to: ALVAQKSCTERR*RPTSRQHLQNR
Trigger: CCGATTCTGCAAGTGCTGCCGTGAGGTGGGCCTGCAGCGGCGCTCTGTGCAGCTCTTCTGTGCCACCAATGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS CCA 72 bp GGCAAGCTGCTGCAGACGCGCGCTCCCCATGACATGTaGCAGTTGGACCCTCATGCCTCCATGGGTGACCTC +
Preference number: 6 (lower is better)
Translates to: GKLLQTRAPHDM*QLDPHASMGDL
Trigger: GAGGTCACCCATGGAGGCATGAGGGTCCAACTGCCACATGTCATGGGGAGCGCGCGTCTGCAGCAGCTTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399391.7
ENST00000399397.6
ENST00000485669.1
ENST00000498332.5
CDS CCA 72 bp ACGTGCGGTAATGCCGGTCCCCATAGGCAGTGCAGGTaGAGGCGCAAGGGTGCAGGGTGCACTGGAATGAGC +
Preference number: 6 (lower is better)
Translates to: TCGNAGPHRQCR*RRKGAGCTGMS
Trigger: GCTCATTCCAGTGCACCCTGCACCCTTGCGCCTCCACCTGCACTGCCTATGGGGACCGGCATTACCGCACGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS CCA 72 bp AGATCCACCGGGACAATGGTGTCTGGGGCTTGGCACTaGTGCTGGCAGCAGCCGCTGAGGGAGCTGTTCCAG +
Preference number: 6 (lower is better)
Translates to: RSTGTMVSGAWH*CWQQPLRELFQ
Trigger: CTGGAACAGCTCCCTCAGCGGCTGCTGCCAGCACCAGTGCCAAGCCCCAGACACCATTGTCCCGGTGGATCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS CCA 72 bp ACTGTAGCCTTGTCCCCCATGGCAAGGGTCGCCTCCTaGTGGCTGCTGCTGGAGGAAACACGAGTCTGCGCG +
Preference number: 6 (lower is better)
Translates to: TVALSPMARVAS*WLLLEETRVCA
Trigger: CGCGCAGACTCGTGTTTCCTCCAGCAGCAGCCACCAGGAGGCGACCCTTGCCATGGGGGACAAGGCTACAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS CAA 90 bp AATGACTCCGGAGGCACAAAGCGGTGGCAGGCACTGAAGGTGCGGTaGGACACCATGCGAAGGCAGGGCGAGCAGTCAGTTGTGGCGCAG +
Preference number: 6 (lower is better)
Translates to: NDSGGTKRWQALKVR*DTMRRQGEQSVVAQ
Trigger: CTGCGCCACAACTGACTGCTCGCCCTGCCTTCGCATGGTGTCCAACCGCACCTTCAGTGCCTGCCACCGCTTTGTGCCTCCGGAGTCATT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS TCA 72 bp AGAATGACTCCGGAGGCACAAAGCGGTGGCAGGCACTaGAGGTGCGGTTGGACACCATGCGAAGGCAGGGCG +
Preference number: 6 (lower is better)
Translates to: RMTPEAQSGGRH*RCGWTPCEGRA
Trigger: CGCCCTGCCTTCGCATGGTGTCCAACCGCACCTTCAGTGCCTGCCACCGCTTTGTGCCTCCGGAGTCATTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS TCA 72 bp GACAGCCGAGGCACCATCCCAGGCCAGTGTGAAGGCTaGCTGATGCCGCACGATGACATAGCCGGCAAGCTG +
Preference number: 6 (lower is better)
Translates to: DSRGTIPGQCEG*LMPHDDIAGKL
Trigger: CAGCTTGCCGGCTATGTCATCGTGCGGCATCAGTCAGCCTTCACACTGGCCTGGGATGGTGCCTCGGCTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399391.7
ENST00000399397.6
ENST00000485669.1
ENST00000498332.5
CDS TCA 72 bp AAGGTGCCCGAAGAGCGGCTCTTGGCCAGGATGTACTaGCATGTGGCGGGGAACGTGTACCGGCGGCCATCA +
Preference number: 6 (lower is better)
Translates to: KVPEERLLARMY*HVAGNVYRRPS
Trigger: TGATGGCCGCCGGTACACGTTCCCCGCCACATGTCAGTACATCCTGGCCAAGAGCCGCTCTTCGGGCACCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399391.7
ENST00000399397.6
ENST00000498332.5
CDS GCA 72 bp ATGGCCACGTACACAGTCAGGGCCACGCAGGGCTGCTaGACGTACTTGGTGTCCCGGATCCACAGCTCACAG +
Preference number: 6 (lower is better)
Translates to: MATYTVRATQGC*TYLVSRIHSSQ
Trigger: CTGTGAGCTGTGGATCCGGGACACCAAGTACGTGCAGCAGCCCTGCGTGGCCCTGACTGTGTACGTGGCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS GCA 72 bp CACATGGCCACGTACACAGTCAGGGCCACGCAGGGCTaGTGCACGTACTTGGTGTCCCGGATCCACAGCTCA +
Preference number: 6 (lower is better)
Translates to: HMATYTVRATQG*CTYLVSRIHSS
Trigger: TGAGCTGTGGATCCGGGACACCAAGTACGTGCAGCAGCCCTGCGTGGCCCTGACTGTGTACGTGGCCATGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS GCA 72 bp CTCCACACCTCCACCAGGGCAGTGCCCAGGCCACACTaGACTTGGGGACAGCGGAAGTTCTCACACACACAC +
Preference number: 6 (lower is better)
Translates to: LHTSTRAVPRPH*TWGQRKFSHTH
Trigger: GTGTGTGTGTGAGAACTTCCGCTGTCCCCAAGTGCAGTGTGGCCTGGGCACTGCCCTGGTGGAGGTGTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS GCA 72 bp ATGTCTCCACGTGGTGCTGCCCCCACGCCCGGCAAATaGTGTCCCTCTCAGGGCCGGCATTGTACACCATCT +
Preference number: 6 (lower is better)
Translates to: MSPRGAAPTPGK*CPSQGRHCTPS
Trigger: AGATGGTGTACAATGCCGGCCCTGAGAGGGACAGCATTTGCCGGGCGTGGGGGCAGCACCACGTGGAGACAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000399391.7
ENST00000399397.6
ENST00000428619.1
ENST00000498332.5
CDS GCA 72 bp GCCTGGGTCAGGGTCACCTGCCTCCGAGGGTCCTGGTaGAGAATCACTGACACTGACTGGACACAGGCTCCA +
Preference number: 6 (lower is better)
Translates to: AWVRVTCLRGSW*RITDTDWTQAP
Trigger: TGGAGCCTGTGTCCAGTCAGTGTCAGTGATTCTGCACCAGGACCCTCGGAGGCAGGTGACCCTGACCCAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399391.7
ENST00000399397.6
ENST00000498332.5
CDS CCA 72 bp GTGGCTCCTCATCACTGGGAGTGGGCAACCCTTGACTaGGAGGGAGGGTCTCATTGCCAAGGGCCTCTGTGG +
Preference number: 6 (lower is better)
Translates to: VAPHHWEWATLD*EGGSHCQGPLW
Trigger: CCACAGAGGCCCTTGGCAATGAGACCCTCCCTCCCAGTCAAGGGTTGCCCACTCCCAGTGATGAGGAGCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS CCA 72 bp GTTCTGCTGCTGTTCCAGCCACAGTTAGAGGGGTGCTaGGACTTGAAGCACTCTGGGCCTGGGTGGGCTGGG +
Preference number: 6 (lower is better)
Translates to: VLLLFQPQLEGC*DLKHSGPGWAG
Trigger: CCCAGCCCACCCAGGCCCAGAGTGCTTCAAGTCCCAGCACCCCTCTAACTGTGGCTGGAACAGCAGCAGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS CCA 72 bp GAGCGCCTCCCCTTCTTGACATTCGGGGATGGAGTCTaGACAGTCACCACAGGCGCACTTGGCCTCCGGGAT +
Preference number: 6 (lower is better)
Translates to: ERLPFLTFGDGV*TVTTGALGLRD
Trigger: ATCCCGGAGGCCAAGTGCGCCTGTGGTGACTGTCCAGACTCCATCCCCGAATGTCAAGAAGGGGAGGCGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342528.2
CDS CCA 72 bp ACGCCCGGGCATACTCCGCCAGTGCCCGGCACCAGGTaGCTACATCACCCATTGATTGGCAGAGATCACTGG +
Preference number: 6 (lower is better)
Translates to: TPGHTPPVPGTR*LHHPLIGRDHW
Trigger: CCAGTGATCTCTGCCAATCAATGGGTGATGTAGCCACCTGGTGCCGGGCACTGGCGGAGTATGCCCGGGCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399391.7
ENST00000399397.6
ENST00000498332.5
CDS CCA 72 bp ACAGAGGTCAGCCTGGGTGTCCAGATAGGTGTCCGGTaGGCAGGCACAGCCCTCCACACACTCGTCTCTGCT +
Preference number: 6 (lower is better)
Translates to: TEVSLGVQIGVR*AGTALHTLVSA
Trigger: AGCAGAGACGAGTGTGTGGAGGGCTGTGCCTGCCCACCGGACACCTATCTGGACACCCAGGCTGACCTCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS CCA 72 bp ACCCCCAACCTTGGCACACTCAGTCTCATTGAGCGGTaGGCAGCTTATGGGAGAGCGGACCAGCACGGCACC +
Preference number: 6 (lower is better)
Translates to: TPNLGTLSLIER*AAYGRADQHGT
Trigger: GGTGCCGTGCTGGTCCGCTCTCCCATAAGCTGCCCACCGCTCAATGAGACTGAGTGTGCCAAGGTTGGGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS CCA 72 bp TGGGCTCCTGCACTGTATAGGGCACCCAGGTGGCATTaGTGGCACAGAAGAGCTGCACAGAGCGCCGCTGCA +
Preference number: 6 (lower is better)
Translates to: WAPALYRAPRWH*WHRRAAQSAAA
Trigger: TGCAGCGGCGCTCTGTGCAGCTCTTCTGTGCCACCAATGCCACCTGGGTGCCCTATACAGTGCAGGAGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS CCA 72 bp AGTCGGTGGGCTCCTGCACTGTATAGGGCACCCAGGTaGCATTGGTGGCACAGAAGAGCTGCACAGAGCGCC +
Preference number: 6 (lower is better)
Translates to: SRWAPALYRAPR*HWWHRRAAQSA
Trigger: GGCGCTCTGTGCAGCTCTTCTGTGCCACCAATGCCACCTGGGTGCCCTATACAGTGCAGGAGCCCACCGACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS CAA 90 bp CCATCACAGATACCGCACAGGCCATGGCCCTGGGCCTTGCTGGTTTaGCTGGCCTCCACGATCATGAGTCCTGAGCTGTGGAGCCACTGG +
Preference number: 6 (lower is better)
Translates to: PSQIPHRPWPWALLV*LASTIMSPELWSHW
Trigger: CCAGTGGCTCCACAGCTCAGGACTCATGATCGTGGAGGCCAGCAAAACCAGCAAGGCCCAGGGCCATGGCCTGTGCGGTATCTGTGATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS CAA 90 bp ATGGCCACGTACACAGTCAGGGCCACGCAGGGCTGCTGCACGTACTaGGTGTCCCGGATCCACAGCTCACAGAATGACTCCGGAGGCACA +
Preference number: 6 (lower is better)
Translates to: MATYTVRATQGCCTY*VSRIHSSQNDSGGT
Trigger: TGTGCCTCCGGAGTCATTCTGTGAGCTGTGGATCCGGGACACCAAGTACGTGCAGCAGCCCTGCGTGGCCCTGACTGTGTACGTGGCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS CAA 90 bp TCAGGGCCGGCATTGTACACCATCTGGCAGCGCGGTCCAGTGGCATaGAAGCGTCTGCAGTCACAGAAGGCTGGGTGCACACACTCGCCT +
Preference number: 6 (lower is better)
Translates to: SGPALYTIWQRGPVA*KRLQSQKAGCTHSP
Trigger: AGGCGAGTGTGTGCACCCAGCCTTCTGTGACTGCAGACGCTTCAATGCCACTGGACCGCGCTGCCAGATGGTGTACAATGCCGGCCCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399391.7
ENST00000399397.6
ENST00000428619.1
ENST00000498332.5
CDS CAA 90 bp TTCCGTGGCAGGGCTACGTACAGGAAGTCATCCTGCGTGTTGCCATaGAAGGTGCCGCAGAGGCCCACGGTATCCTCCACCCATCGCTGG +
Preference number: 6 (lower is better)
Translates to: FRGRATYRKSSCVLP*KVPQRPTVSSTHRW
Trigger: CCAGCGATGGGTGGAGGATACCGTGGGCCTCTGCGGCACCTTCAATGGCAACACGCAGGATGACTTCCTGTACGTAGCCCTGCCACGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498332.5
CDS TCA 72 bp AGCTGTGGCTCCTCATCACTGGGAGTGGGCAACCCTTaGCTGGGAGGGAGGGTCTCATTGCCAAGGGCCTCT +
Preference number: 6 (lower is better)
Translates to: SCGSSSLGVGNP*LGGRVSLPRAS
Trigger: AGAGGCCCTTGGCAATGAGACCCTCCCTCCCAGTCAAGGGTTGCCCACTCCCAGTGATGAGGAGCCACAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS TCA 72 bp CCACTGGAGACAGGAAGTCATCCTGCGTGTTGCCATTaGAGGTGCCGCAGAGGCCCACGGTATCCTCCACCC +
Preference number: 6 (lower is better)
Translates to: PLETGSHPACCH*RCRRGPRYPPP
Trigger: GGGTGGAGGATACCGTGGGCCTCTGCGGCACCTTCAATGGCAACACGCAGGATGACTTCCTGTCTCCAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS TCA 72 bp CCACGGAACCCCCAACCTTGGCACACTCAGTCTCATTaGGCGGTGGGCAGCTTATGGGAGAGCGGACCAGCA +
Preference number: 6 (lower is better)
Translates to: PRNPQPWHTQSH*AVGSLWESGPA
Trigger: TGCTGGTCCGCTCTCCCATAAGCTGCCCACCGCTCAATGAGACTGAGTGTGCCAAGGTTGGGGGTTCCGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS TCA 72 bp TTTAACGTTTCTCATTCCTCGAGCCCCCGACCTCCCTaGGTCCACAACCCTCTCACCGAGGCGCTGCACCCG +
Preference number: 6 (lower is better)
Translates to: FNVSHSSSPRPP*VHNPLTEALHP
Trigger: CGGGTGCAGCGCCTCGGTGAGAGGGTTGTGGACTCAGGGAGGTCGGGGGCTCGAGGAATGAGAAACGTTAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399391.7
CDS GCA 72 bp TCAGGTTCAGCAGTTGCTGCTCACACGTCCTCTCCCTaGTCAGCTCCAGGTCCGTGTGCAGGTCGCTGCAGT +
Preference number: 6 (lower is better)
Translates to: SGSAVAAHTSSP*SAPGPCAGRCS
Trigger: ACTGCAGCGACCTGCACACGGACCTGGAGCTGAGCAGGGAGAGGACGTGTGAGCAGCAACTGCTGAACCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS GCA 72 bp CCTGTTCTGCTGCTGTTCCAGCCACAGTTAGAGGGGTaGTGGGACTTGAAGCACTCTGGGCCTGGGTGGGCT +
Preference number: 6 (lower is better)
Translates to: PVLLLFQPQLEG*WDLKHSGPGWA
Trigger: AGCCCACCCAGGCCCAGAGTGCTTCAAGTCCCAGCACCCCTCTAACTGTGGCTGGAACAGCAGCAGAACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS GCA 72 bp AGCTGGCCCTCCAGGCAGATGTGGCGGACGCAGTCCTaGTCGGCGATTGGAACACAGGTGGTGGATGTATTG +
Preference number: 6 (lower is better)
Translates to: SWPSRQMWRTQS*SAIGTQVVDVL
Trigger: CAATACATCCACCACCTGTGTTCCAATCGCCGAGCAGGACTGCGTCCGCCACATCTGCCTGGAGGGCCAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS GCA 72 bp GTCCCTCGGGCTCATGGCGACCCACCAGGGTGTAGCTaGCCTTTCCGGAGAGGTAGTAGTAGAGCCCATCAA +
Preference number: 6 (lower is better)
Translates to: VPRAHGDPPGCS*PFRRGSSRAHQ
Trigger: TTGATGGGCTCTACTACTACCTCTCCGGAAAGGGCAGCTACACCCTGGTGGGTCGCCATGAGCCCGAGGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399391.7
ENST00000399397.6
ENST00000498332.5
CDS GCA 72 bp ATGCCCCCACGAAGTCAAACGGGAGCCCATCAAACGTaGGGTAATGCCGGTCCCCATAGGCAGTGCAGGTGG +
Preference number: 6 (lower is better)
Translates to: MPPRSQTGAHQT*GNAGPHRQCRW
Trigger: CCACCTGCACTGCCTATGGGGACCGGCATTACCGCACGTTTGATGGGCTCCCGTTTGACTTCGTGGGGGCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS CCA 72 bp CCTTCATGCCCACCAGAGCACCACCGGCTGCCAAGCTaGATAGCTGATAGGGGCCCTTACCTAGCAGGCAGA +
Preference number: 6 (lower is better)
Translates to: PSCPPEHHRLPS*IADRGPYLAGR
Trigger: TCTGCCTGCTAGGTAAGGGCCCCTATCAGCTATCCAGCTTGGCAGCCGGTGGTGCTCTGGTGGGCATGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342528.2
CDS CCA 72 bp GACTGGGAGGGAGGGTCTCATTGCCAAGGGCCTCTGTaGGAACCCAAACTGCTGGCTCCACACAGTCCTCCA +
Preference number: 6 (lower is better)
Translates to: DWEGGSHCQGPL*EPKLLAPHSPP
Trigger: TGGAGGACTGTGTGGAGCCAGCAGTTTGGGTTCCCACAGAGGCCCTTGGCAATGAGACCCTCCCTCCCAGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS CCA 72 bp CCATGGGCTGGCTGTGCCCGGCTTCGCCCTTCTCTGTaGATAGCACTATCTCCAAGCTCCTGGTTGCAAGGG +
Preference number: 6 (lower is better)
Translates to: PWAGCARLRPSL*IALSPSSWLQG
Trigger: CCCTTGCAACCAGGAGCTTGGAGATAGTGCTATCCACAGAGAAGGGCGAAGCCGGGCACAGCCAGCCCATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS CCA 72 bp ACACAGTCAGGGCCACGCAGGGCTGCTGCACGTACTTaGTGTCCCGGATCCACAGCTCACAGAATGACTCCG +
Preference number: 6 (lower is better)
Translates to: TQSGPRRAAART*CPGSTAHRMTP
Trigger: CGGAGTCATTCTGTGAGCTGTGGATCCGGGACACCAAGTACGTGCAGCAGCCCTGCGTGGCCCTGACTGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS CCA 72 bp GTACAGAGTCCCGTGAAACTCACAGGGACACTCAGCTaGTGCCACGCAGCCCCCATCCTCGAAGATGAGCCC +
Preference number: 6 (lower is better)
Translates to: VQSPVKLTGTLS*CHAAPILEDEP
Trigger: GGGCTCATCTTCGAGGATGGGGGCTGCGTGGCACCAGCTGAGTGTCCCTGTGAGTTTCACGGGACTCTGTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399391.7
ENST00000399397.6
ENST00000498332.5
CDS CCA 72 bp CCGAAGAGCGGCTCTTGGCCAGGATGTACTGACATGTaGCGGGGAACGTGTACCGGCGGCCATCAAAGGTTG +
Preference number: 6 (lower is better)
Translates to: PKSGSWPGCTDM*RGTCTGGHQRL
Trigger: CAACCTTTGATGGCCGCCGGTACACGTTCCCCGCCACATGTCAGTACATCCTGGCCAAGAGCCGCTCTTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399391.7
ENST00000399397.6
ENST00000498332.5
CDS CAA 72 bp CACCTCCACCAGGGCAGTGCCCAGGCCACACTGCACTaGGGGACAGCGGAAGTTCTCACACACACACTGGTA +
Preference number: 6 (lower is better)
Translates to: HLHQGSAQATLH*GTAEVLTHTLV
Trigger: TACCAGTGTGTGTGTGAGAACTTCCGCTGTCCCCAAGTGCAGTGTGGCCTGGGCACTGCCCTGGTGGAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS CAA 72 bp CCCACTGGAGACAGGAAGTCATCCTGCGTGTTGCCATaGAAGGTGCCGCAGAGGCCCACGGTATCCTCCACC +
Preference number: 6 (lower is better)
Translates to: PTGDRKSSCVLP*KVPQRPTVSST
Trigger: GGTGGAGGATACCGTGGGCCTCTGCGGCACCTTCAATGGCAACACGCAGGATGACTTCCTGTCTCCAGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS CAA 72 bp ACCACGGAACCCCCAACCTTGGCACACTCAGTCTCATaGAGCGGTGGGCAGCTTATGGGAGAGCGGACCAGC +
Preference number: 6 (lower is better)
Translates to: TTEPPTLAHSVS*SGGQLMGERTS
Trigger: GCTGGTCCGCTCTCCCATAAGCTGCCCACCGCTCAATGAGACTGAGTGTGCCAAGGTTGGGGGTTCCGTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS CAA 90 bp CCTGTCCTGCTTATGACCTTAGTTACTGCAGGTGTCAGCACAGCCTaGTGGGATCCCGAGGAGGTGGGGGACCTGGAGATGGCTCCAGGG +
Preference number: 6 (lower is better)
Translates to: PVLLMTLVTAGVSTA*WDPEEVGDLEMAPG
Trigger: CCCTGGAGCCATCTCCAGGTCCCCCACCTCCTCGGGATCCCACAAGGCTGTGCTGACACCTGCAGTAACTAAGGTCATAAGCAGGACAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS CAA 90 bp TCCTCAGCCCCACCCACCACTGAGCCATCCTTCAGGGTAAGGTCATaGGCTGCATCTCCATCACAGATACCGCACAGGCCATGGCCCTGG +
Preference number: 6 (lower is better)
Translates to: SSAPPTTEPSFRVRS*AASPSQIPHRPWPW
Trigger: CCAGGGCCATGGCCTGTGCGGTATCTGTGATGGAGATGCAGCCAATGACCTTACCCTGAAGGATGGCTCAGTGGTGGGTGGGGCTGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS CAA 90 bp TCAGGTACACCCACTGGAGACAGGAAGTCATCCTGCGTGTTGCCATaGAAGGTGCCGCAGAGGCCCACGGTATCCTCCACCCATCGCTGG +
Preference number: 6 (lower is better)
Translates to: SGTPTGDRKSSCVLP*KVPQRPTVSSTHRW
Trigger: CCAGCGATGGGTGGAGGATACCGTGGGCCTCTGCGGCACCTTCAATGGCAACACGCAGGATGACTTCCTGTCTCCAGTGGGTGTACCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS CAA 90 bp TTCGGGTTCCGTGGCAGGGCTACGTACAGGAAGTCATCCTGCGTGTaGCCATTGAAGGTGCCGCAGAGGCCCACGGTATCCTCCACCCAT +
Preference number: 6 (lower is better)
Translates to: FGFRGRATYRKSSCV*PLKVPQRPTVSSTH
Trigger: ATGGGTGGAGGATACCGTGGGCCTCTGCGGCACCTTCAATGGCAACACGCAGGATGACTTCCTGTACGTAGCCCTGCCACGGAACCCGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498332.5
CDS TCA 72 bp AGAGGAGCTGGGAGGGACGAGTTGACTCAAGGGACATaGAGGGTGTGGCTGCCAGCCCATCAGTGGCTGTTG +
Preference number: 6 (lower is better)
Translates to: RGAGRDELTQGT*RVWLPAHQWLL
Trigger: CAACAGCCACTGATGGGCTGGCAGCCACACCCTTCATGTCCCTTGAGTCAACTCGTCCCTCCCAGCTCCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS TCA 72 bp GCTGCTGGAGTGAAAGGCAGTACTGGGCTAAGTGTCTaGGCAGGCAGAGTCGTGGCCTGTGGCTGGAGTGGA +
Preference number: 6 (lower is better)
Translates to: AAGVKGSTGLSV*AGRVVACGWSG
Trigger: TCCACTCCAGCCACAGGCCACGACTCTGCCTGCTCAGACACTTAGCCCAGTACTGCCTTTCACTCCAGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS GCA 72 bp TCCTCACTAGGACTATGTCATCGCCCACCGCCTTCATaGCCACCAGAGCACCACCGGCTGCCAAGCTGGATA +
Preference number: 6 (lower is better)
Translates to: SSLGLCHRPPPS*PPEHHRLPSWI
Trigger: TATCCAGCTTGGCAGCCGGTGGTGCTCTGGTGGGCATGAAGGCGGTGGGCGATGACATAGTCCTAGTGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS GCA 72 bp AAGAAGGAGGCATGCTGTTGGAAGGTGTCACGGCCCTaGCACTTAGCCAGCTCCAGAGACCCGTTGGCTGTG +
Preference number: 6 (lower is better)
Translates to: KKEACCWKVSRP*HLASSRDPLAV
Trigger: CACAGCCAACGGGTCTCTGGAGCTGGCTAAGTGGCAGGGCCGTGACACCTTCCAACAGCATGCCTCCTTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS GCA 72 bp CTGGCATGTCTTGGGTGGCTCACAGGCTGTCACACATaGCTGGTATGTGGAGTCGCTGGAGCACAGGAAGGG +
Preference number: 6 (lower is better)
Translates to: LACLGWLTGCHT*LVCGVAGAQEG
Trigger: CCCTTCCTGTGCTCCAGCGACTCCACATACCAGGCATGTGTGACAGCCTGTGAGCCACCCAAGACATGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS GCA 72 bp CACCAGTCACTGAGCACTCAGCTGGGCAGACAGCTGTaGTGCACTCCCACTTGCCTGAGGTGCATGTGCAAG +
Preference number: 6 (lower is better)
Translates to: HQSLSTQLGRQL*CTPTCLRCMCK
Trigger: CTTGCACATGCACCTCAGGCAAGTGGGAGTGCAGCACAGCTGTCTGCCCAGCTGAGTGCTCAGTGACTGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399391.7
ENST00000399397.6
ENST00000498332.5
CDS GCA 72 bp CAGGCTCCATCTTGGTTCAGGCCACATGGGGCATTCTaGAATGTCACGGTGAAGGTGCCCGAAGAGCGGCTC +
Preference number: 6 (lower is better)
Translates to: QAPSWFRPHGAF*NVTVKVPEERL
Trigger: GAGCCGCTCTTCGGGCACCTTCACCGTGACATTGCAGAATGCCCCATGTGGCCTGAACCAAGATGGAGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399391.7
ENST00000399397.6
ENST00000498332.5
CDS CCA 72 bp GGGCACTCAACTGCAGCCCAACTGCTGCCAAACTCCTaGGGGTTAGTTAGCTCTAGGTTCTCCGGGGTCCTC +
Preference number: 6 (lower is better)
Translates to: GHSTAAQLLPNS*GLVSSRFSGVL
Trigger: GAGGACCCCGGAGAACCTAGAGCTAACTAACCCCCAGGAGTTTGGCAGCAGTTGGGCTGCAGTTGAGTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS CCA 72 bp TGGGCTAAGTGTCTGAGCAGGCAGAGTCGTGGCCTGTaGCTGGAGTGGAGTGGTGATGACAGAGGCTTTGGG +
Preference number: 6 (lower is better)
Translates to: WAKCLSRQSRGL*LEWSGDDRGFG
Trigger: CCCAAAGCCTCTGTCATCACCACTCCACTCCAGCCACAGGCCACGACTCTGCCTGCTCAGACACTTAGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS CCA 72 bp CGCCTGGGTCATTGCTGCTGGAGTGAAAGGCAGTACTaGGCTAAGTGTCTGAGCAGGCAGAGTCGTGGCCTG +
Preference number: 6 (lower is better)
Translates to: RLGHCCWSERQY*AKCLSRQSRGL
Trigger: CAGGCCACGACTCTGCCTGCTCAGACACTTAGCCCAGTACTGCCTTTCACTCCAGCAGCAATGACCCAGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS CCA 72 bp CATGTCTTGGGTGGCTCACAGGCTGTCACACATGCCTaGTATGTGGAGTCGCTGGAGCACAGGAAGGGGCAG +
Preference number: 6 (lower is better)
Translates to: HVLGGSQAVTHA*YVESLEHRKGQ
Trigger: CTGCCCCTTCCTGTGCTCCAGCGACTCCACATACCAGGCATGTGTGACAGCCTGTGAGCCACCCAAGACATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS CCA 72 bp CGGGTCATTGTGTACCTGAGTAGGGAGTTCAGAGGCTaGTTTGCAGGCTCCTGCCACAGGCCTGACCCTGAG +
Preference number: 6 (lower is better)
Translates to: RVIVYLSREFRG*FAGSCHRPDPE
Trigger: CTCAGGGTCAGGCCTGTGGCAGGAGCCTGCAAACCAGCCTCTGAACTCCCTACTCAGGTACACAATGACCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485669.1
CDS CAA 72 bp TACACAGTCAGGGCCACGCAGGGCTGCTGCACGTACTaGGTGTCCCGGATCCACAGCTCACAGAATGACTCC +
Preference number: 6 (lower is better)
Translates to: YTVRATQGCCTY*VSRIHSSQNDS
Trigger: GGAGTCATTCTGTGAGCTGTGGATCCGGGACACCAAGTACGTGCAGCAGCCCTGCGTGGCCCTGACTGTGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS CAA 72 bp AGGGCTACGTACAGGAAGTCATCCTGCGTGTTGCCATaGAAGGTGCCGCAGAGGCCCACGGTATCCTCCACC +
Preference number: 6 (lower is better)
Translates to: RATYRKSSCVLP*KVPQRPTVSST
Trigger: GGTGGAGGATACCGTGGGCCTCTGCGGCACCTTCAATGGCAACACGCAGGATGACTTCCTGTACGTAGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498332.5
CDS CAA 90 bp GCAGAGTTCCGTGGTATTCCTGTGCACAGTGAGCGCCTCCCCTTCTaGACATTCGGGGATGGAGTCTGGACAGTCACCACAGGCGCACTT +
Preference number: 6 (lower is better)
Translates to: AEFRGIPVHSERLPF*TFGDGVWTVTTGAL
Trigger: AAGTGCGCCTGTGGTGACTGTCCAGACTCCATCCCCGAATGTCAAGAAGGGGAGGCGCTCACTGTGCACAGGAATACCACGGAACTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342528.2
CDS CAA 90 bp GCAGAGTTCCGTGGTATTCCTGTGCACAGTGAGCGCCTCCCCTTCTaGACATTCGGGGATGGAGTCTGGACAGTCACCACAGGCGCAGAA +
Preference number: 6 (lower is better)
Translates to: AEFRGIPVHSERLPF*TFGDGVWTVTTGAE
Trigger: TTCTGCGCCTGTGGTGACTGTCCAGACTCCATCCCCGAATGTCAAGAAGGGGAGGCGCTCACTGTGCACAGGAATACCACGGAACTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS CAA 90 bp TCGCAGGACACTAGGTTCACAGGGGTGCTGCTCCTGCATTCATTCTaGCGGATGGTCATGCGGATGGTCACCTTCTTGCAGGAGCGCCCA +
Preference number: 6 (lower is better)
Translates to: SQDTRFTGVLLLHSF*RMVMRMVTFLQERP
Trigger: TGGGCGCTCCTGCAAGAAGGTGACCATCCGCATGACCATCCGCAAGAATGAATGCAGGAGCAGCACCCCTGTGAACCTAGTGTCCTGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS TCA 72 bp CCTGGGCCTTGCTGGTTTTGCTGGCCTCCACGATCATaGGTCCTGAGCTGTGGAGCCACTGGATCTGGATGT +
Preference number: 6 (lower is better)
Translates to: PGPCWFCWPPRS*VLSCGATGSGC
Trigger: ACATCCAGATCCAGTGGCTCCACAGCTCAGGACTCATGATCGTGGAGGCCAGCAAAACCAGCAAGGCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS TCA 72 bp CACGTACTTGGTGTCCCGGATCCACAGCTCACAGAATaGCTCCGGAGGCACAAAGCGGTGGCAGGCACTGAA +
Preference number: 6 (lower is better)
Translates to: HVLGVPDPQLTE*LRRHKAVAGTE
Trigger: TTCAGTGCCTGCCACCGCTTTGTGCCTCCGGAGTCATTCTGTGAGCTGTGGATCCGGGACACCAAGTACGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS TCA 72 bp CATTGTACACCATCTGGCAGCGCGGTCCAGTGGCATTaGAGCGTCTGCAGTCACAGAAGGCTGGGTGCACAC +
Preference number: 6 (lower is better)
Translates to: HCTPSGSAVQWH*SVCSHRRLGAH
Trigger: GTGTGCACCCAGCCTTCTGTGACTGCAGACGCTTCAATGCCACTGGACCGCGCTGCCAGATGGTGTACAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399391.7
ENST00000399397.6
ENST00000428619.1
ENST00000498332.5
CDS GCA 72 bp GGCTGTGACGTGAAGGAAGAAGTTGGGTCTGTCTGCTaGCTCCAGGGACACCACATCTGGGTCATGGGCCTT +
Preference number: 6 (lower is better)
Translates to: GCDVKEEVGSVC*LQGHHIWVMGL
Trigger: AAGGCCCATGACCCAGATGTGGTGTCCCTGGAGGCAGCAGACAGACCCAACTTCTTCCTTCACGTCACAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS GCA 72 bp TCCATGGCACCTGACACCATGCCAGGTGTGGGTGTCTaGAGTGCAACAGGGAGGGATGAGGACTCTGGTGTA +
Preference number: 6 (lower is better)
Translates to: SMAPDTMPGVGV*SATGRDEDSGV
Trigger: TACACCAGAGTCCTCATCCCTCCCTGTTGCACTGCAGACACCCACACCTGGCATGGTGTCAGGTGCCATGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS GCA 72 bp CTGGGGGACCCCTGTCCTGCTTATGACCTTAGTTACTaGAGGTGTCAGCACAGCCTTGTGGGATCCCGAGGA +
Preference number: 6 (lower is better)
Translates to: LGDPCPAYDLSY*RCQHSLVGSRG
Trigger: TCCTCGGGATCCCACAAGGCTGTGCTGACACCTGCAGTAACTAAGGTCATAAGCAGGACAGGGGTCCCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS GCA 72 bp GATGATCTTGTACTGGTCAAACAGAAGGACATCCCCTaGCTGGGTCAGGGTCACCTGCCTCCGAGGGTCCTG +
Preference number: 6 (lower is better)
Translates to: DDLVLVKQKDIP*LGQGHLPPRVL
Trigger: CAGGACCCTCGGAGGCAGGTGACCCTGACCCAGGCAGGGGATGTCCTTCTGTTTGACCAGTACAAGATCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399391.7
ENST00000399397.6
ENST00000498332.5
CDS GCA 72 bp CATTCTTGCGGATGGTCATGCGGATGGTCACCTTCTTaGAGGAGCGCCCATCCTCCTTACAGGTCCTGCAGC +
Preference number: 6 (lower is better)
Translates to: HSCGWSCGWSPS*RSAHPPYRSCS
Trigger: GCTGCAGGACCTGTAAGGAGGATGGGCGCTCCTGCAAGAAGGTGACCATCCGCATGACCATCCGCAAGAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS GCA 72 bp GGGTGCTGCTCCTGCATTCATTCTTGCGGATGGTCATaGGGATGGTCACCTTCTTGCAGGAGCGCCCATCCT +
Preference number: 6 (lower is better)
Translates to: GCCSCIHSCGWS*GWSPSCRSAHP
Trigger: AGGATGGGCGCTCCTGCAAGAAGGTGACCATCCGCATGACCATCCGCAAGAATGAATGCAGGAGCAGCACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS CCA 72 bp GTTCCCACACAGCCCATGGGTCCAGCCCAGAAGCTCTaGACTCATCTTGATGTAGACAGCCGAGGCACCATC +
Preference number: 6 (lower is better)
Translates to: VPTQPMGPAQKL*THLDVDSRGTI
Trigger: GATGGTGCCTCGGCTGTCTACATCAAGATGAGTCCAGAGCTTCTGGGCTGGACCCATGGGCTGTGTGGGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399391.7
ENST00000399397.6
ENST00000485669.1
ENST00000498332.5
CDS CCA 72 bp CTCCGAGGGTCCTGGTGCAGAATCACTGACACTGACTaGACACAGGCTCCATCTTGGTTCAGGCCACATGGG +
Preference number: 6 (lower is better)
Translates to: LRGSWCRITDTD*TQAPSWFRPHG
Trigger: CCCATGTGGCCTGAACCAAGATGGAGCCTGTGTCCAGTCAGTGTCAGTGATTCTGCACCAGGACCCTCGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399391.7
ENST00000399397.6
ENST00000498332.5
CDS CCA 72 bp CCTTCATGCCCACCAGAGCACCACCGGCTGCCAAGCTaGATAGCTGATAGGGGCCCTTACCTAGCACTTTGT +
Preference number: 6 (lower is better)
Translates to: PSCPPEHHRLPS*IADRGPYLALC
Trigger: ACAAAGTGCTAGGTAAGGGCCCCTATCAGCTATCCAGCTTGGCAGCCGGTGGTGCTCTGGTGGGCATGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS CCA 72 bp TCACAGGGGTGCTGCTCCTGCATTCATTCTTGCGGATaGTCATGCGGATGGTCACCTTCTTGCAGGAGCGCC +
Preference number: 6 (lower is better)
Translates to: SQGCCSCIHSCG*SCGWSPSCRSA
Trigger: GGCGCTCCTGCAAGAAGGTGACCATCCGCATGACCATCCGCAAGAATGAATGCAGGAGCAGCACCCCTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS CCA 72 bp CCTAAGGGGCCCATTTCCCCTCTTCTTCGGGTTCCGTaGCAGGGCTACGTACAGGAAGTCATCCTGCGTGTT +
Preference number: 6 (lower is better)
Translates to: PKGPISPLLRVP*QGYVQEVILRV
Trigger: AACACGCAGGATGACTTCCTGTACGTAGCCCTGCCACGGAACCCGAAGAAGAGGGGAAATGGGCCCCTTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498332.5
CDS CAA 72 bp GCATTGTACACCATCTGGCAGCGCGGTCCAGTGGCATaGAAGCGTCTGCAGTCACAGAAGGCTGGGTGCACA +
Preference number: 6 (lower is better)
Translates to: ALYTIWQRGPVA*KRLQSQKAGCT
Trigger: TGTGCACCCAGCCTTCTGTGACTGCAGACGCTTCAATGCCACTGGACCGCGCTGCCAGATGGTGTACAATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399391.7
ENST00000399397.6
ENST00000428619.1
ENST00000498332.5
CDS TCA 72 bp TGGCGGGGAACGTGTACCGGCGGCCATCAAAGGTTGTaGAGTGAATGTCACCAGTCACTGAGCACTCAGCTG +
Preference number: 6 (lower is better)
Translates to: WRGTCTGGHQRL*SECHQSLSTQL
Trigger: CAGCTGAGTGCTCAGTGACTGGTGACATTCACTTCACAACCTTTGATGGCCGCCGGTACACGTTCCCCGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399391.7
ENST00000399397.6
ENST00000498332.5
CDS GCA 72 bp GGGCGACCGGGAGGAGACTGTGATGTTAGGGCTTCCTaGAAAGATCACAGTCACCCTTGTTGTCTCCATGGC +
Preference number: 6 (lower is better)
Translates to: GRPGGDCDVRAS*KDHSHPCCLHG
Trigger: GCCATGGAGACAACAAGGGTGACTGTGATCTTTGCAGGAAGCCCTAACATCACAGTCTCCTCCCGGTCGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS GCA 72 bp TGCTATGTGAGTGGGTGGGTGCGCCTGGGTCATTGCTaGTGGAGTGAAAGGCAGTACTGGGCTAAGTGTCTG +
Preference number: 6 (lower is better)
Translates to: CYVSGWVRLGHC*WSERQYWAKCL
Trigger: CAGACACTTAGCCCAGTACTGCCTTTCACTCCAGCAGCAATGACCCAGGCGCACCCACCCACTCACATAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS CCA 72 bp TTGTTGTCTCCATGGCACCTGACACCATGCCAGGTGTaGGTGTCTGCAGTGCAACAGGGAGGGATGAGGACT +
Preference number: 6 (lower is better)
Translates to: LLSPWHLTPCQV*VSAVQQGGMRT
Trigger: AGTCCTCATCCCTCCCTGTTGCACTGCAGACACCCACACCTGGCATGGTGTCAGGTGCCATGGAGACAACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS CCA 72 bp ACCCTCATGCCTCCATGGGTGACCTCCTTGGCCAGATaGATCTCCTGCTCACCCACAAAGAAGAGGCTGACA +
Preference number: 6 (lower is better)
Translates to: TLMPPWVTSLAR*ISCSPTKKRLT
Trigger: TGTCAGCCTCTTCTTTGTGGGTGAGCAGGAGATCCATCTGGCCAAGGAGGTCACCCATGGAGGCATGAGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399391.7
ENST00000399397.6
ENST00000485669.1
ENST00000498332.5
CDS CAA 72 bp TCCAGGGACACCACATCTGGGTCATGGGCCTTGGCCTaGTACAGAGCAGCTGTCAGCAGGAAGCTCACAATG +
Preference number: 6 (lower is better)
Translates to: SRDTTSGSWALA*YRAAVSRKLTM
Trigger: CATTGTGAGCTTCCTGCTGACAGCTGCTCTGTACAAGGCCAAGGCCCATGACCCAGATGTGGTGTCCCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS CAA 72 bp TCATTCTTGCGGATGGTCATGCGGATGGTCACCTTCTaGCAGGAGCGCCCATCCTCCTTACAGGTCCTGCAG +
Preference number: 6 (lower is better)
Translates to: SFLRMVMRMVTF*QERPSSLQVLQ
Trigger: CTGCAGGACCTGTAAGGAGGATGGGCGCTCCTGCAAGAAGGTGACCATCCGCATGACCATCCGCAAGAATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS CAA 90 bp CCACCCTCTGCAGAACCATACATGGAAGTGGGCAGAGACACTTGCTaGGATAGGATGGCCACCTTCCCTGTGGTGCTCTTTCGTGGGACA +
Preference number: 6 (lower is better)
Translates to: PPSAEPYMEVGRDTC*DRMATFPVVLFRGT
Trigger: TGTCCCACGAAAGAGCACCACAGGGAAGGTGGCCATCCTATCCAAGCAAGTGTCTCTGCCCACTTCCATGTATGGTTCTGCAGAGGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS CAA 90 bp ATGACATGTGGCAGTTGGACCCTCATGCCTCCATGGGTGACCTCCTaGGCCAGATGGATCTCCTGCTCACCCACAAAGAAGAGGCTGACA +
Preference number: 6 (lower is better)
Translates to: MTCGSWTLMPPWVTS*ARWISCSPTKKRLT
Trigger: TGTCAGCCTCTTCTTTGTGGGTGAGCAGGAGATCCATCTGGCCAAGGAGGTCACCCATGGAGGCATGAGGGTCCAACTGCCACATGTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399391.7
ENST00000399397.6
ENST00000485669.1
ENST00000498332.5
CDS TCA 72 bp CCTCACGGCAGCACTTGCAGAATCGGGCATAGGTGTTaGTGTTGTAGTTGTAGATGCTGGCGGATGGGCACC +
Preference number: 6 (lower is better)
Translates to: PHGSTCRIGHRC*CCSCRCWRMGT
Trigger: GGTGCCCATCCGCCAGCATCTACAACTACAACATCAACACCTATGCCCGATTCTGCAAGTGCTGCCGTGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS GCA 72 bp CGCTGGCACAGAAGCACTCACAGTCACCACCCTGGCTaGAGCCACATGTGTCTGTCAGGCAGTTTGAGTAAA +
Preference number: 6 (lower is better)
Translates to: RWHRSTHSHHPG*SHMCLSGSLSK
Trigger: TTTACTCAAACTGCCTGACAGACACATGTGGCTGCAGCCAGGGTGGTGACTGTGAGTGCTTCTGTGCCAGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS GCA 72 bp GGTCTCATTGCCAAGGGCCTCTGTGGGAACCCAAACTaGTGGCTCCACACAGTCCTCCAAGTAGACACATCT +
Preference number: 6 (lower is better)
Translates to: GLIAKGLCGNPN*WLHTVLQVDTS
Trigger: AGATGTGTCTACTTGGAGGACTGTGTGGAGCCAGCAGTTTGGGTTCCCACAGAGGCCCTTGGCAATGAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS GCA 72 bp ACACTTGCTTGGATAGGATGGCCACCTTCCCTGTGGTaGTCTTTCGTGGGACAACAGATACCATGGAGGCCG +
Preference number: 6 (lower is better)
Translates to: TLAWIGWPPSLW*SFVGQQIPWRP
Trigger: CGGCCTCCATGGTATCTGTTGTCCCACGAAAGAGCACCACAGGGAAGGTGGCCATCCTATCCAAGCAAGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS GCA 72 bp ACAGGAAGGGGCAGTAGTCAGAGCGCCGCCACTCGATaGACACATGAAATTTGTGGCACATGGCCACGTACA +
Preference number: 6 (lower is better)
Translates to: TGRGSSQSAATR*THEICGTWPRT
Trigger: TGTACGTGGCCATGTGCCACAAATTTCATGTGTGCATCGAGTGGCGGCGCTCTGACTACTGCCCCTTCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS GCA 72 bp TCGTACTTGGCGCAGCCACACACATTCTCCACGCTGTaGATGAACTCCTCATCCAGCTGGGATTTCTCCCAC +
Preference number: 6 (lower is better)
Translates to: SYLAQPHTFSTL*MNSSSSWDFSH
Trigger: GTGGGAGAAATCCCAGCTGGATGAGGAGTTCATGCACAGCGTGGAGAATGTGTGTGGCTGCGCCAAGTACGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS GCA 72 bp CTAGGTTCACAGGGGTGCTGCTCCTGCATTCATTCTTaGGGATGGTCATGCGGATGGTCACCTTCTTGCAGG +
Preference number: 6 (lower is better)
Translates to: LGSQGCCSCIHS*GWSCGWSPSCR
Trigger: CCTGCAAGAAGGTGACCATCCGCATGACCATCCGCAAGAATGAATGCAGGAGCAGCACCCCTGTGAACCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS GCA 72 bp CATCGCAGGACACTAGGTTCACAGGGGTGCTGCTCCTaGATTCATTCTTGCGGATGGTCATGCGGATGGTCA +
Preference number: 6 (lower is better)
Translates to: HRRTLGSQGCCS*IHSCGWSCGWS
Trigger: TGACCATCCGCATGACCATCCGCAAGAATGAATGCAGGAGCAGCACCCCTGTGAACCTAGTGTCCTGCGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS CCA 72 bp TGCTCCTGCATTCATTCTTGCGGATGGTCATGCGGATaGTCACCTTCTTGCAGGAGCGCCCATCCTCCTTAC +
Preference number: 6 (lower is better)
Translates to: CSCIHSCGWSCG*SPSCRSAHPPY
Trigger: GTAAGGAGGATGGGCGCTCCTGCAAGAAGGTGACCATCCGCATGACCATCCGCAAGAATGAATGCAGGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS CAA 72 bp AACGGGGGCCAGTTCAGGTGCCCCAGGTTGGCACTTTaGCAGTCCAGTACATGGACGGTGAGCATTTCATCT +
Preference number: 6 (lower is better)
Translates to: NGGQFRCPRLAL*QSSTWTVSISS
Trigger: AGATGAAATGCTCACCGTCCATGTACTGGACTGCAAAAGTGCCAACCTGGGGCACCTGAACTGGCCCCCGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS TCA 72 bp ATAGCACTATCTCCAAGCTCCTGGTTGCAAGGGGACTaGCAGGAACCTGTTCTGCTGCTGTTCCAGCCACAG +
Preference number: 6 (lower is better)
Translates to: IALSPSSWLQGD*QEPVLLLFQPQ
Trigger: CTGTGGCTGGAACAGCAGCAGAACAGGTTCCTGTCAGTCCCCTTGCAACCAGGAGCTTGGAGATAGTGCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS TCA 72 bp AGTCACAGAAGGCTGGGTGCACACACTCGCCTCCATTaGAGCAGGAGAACAAGTAGGATGGTGCACACTTGG +
Preference number: 6 (lower is better)
Translates to: SHRRLGAHTRLH*SRRTSRMVHTW
Trigger: CCAAGTGTGCACCATCCTACTTGTTCTCCTGCTTCAATGGAGGCGAGTGTGTGCACCCAGCCTTCTGTGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399391.7
ENST00000399397.6
ENST00000428619.1
ENST00000498332.5
CDS TCA 72 bp ACTTGGCGCAGCCACACACATTCTCCACGCTGTGCATaGACTCCTCATCCAGCTGGGATTTCTCCCACAGAT +
Preference number: 6 (lower is better)
Translates to: TWRSHTHSPRCA*TPHPAGISPTD
Trigger: ATCTGTGGGAGAAATCCCAGCTGGATGAGGAGTTCATGCACAGCGTGGAGAATGTGTGTGGCTGCGCCAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS GCA 72 bp TGGTCCCACAAGAGGGTGATGTGCTCCTGTGGGAAATaGACCAGTGTGAAAAATCCCACTCGCCATGTGTGG +
Preference number: 6 (lower is better)
Translates to: WSHKRVMCSCGK*TSVKNPTRHVW
Trigger: CCACACATGGCGAGTGGGATTTTTCACACTGGTGCATTTCCCACAGGAGCACATCACCCTCTTGTGGGACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS GCA 72 bp TCTGCAGAACCATACATGGAAGTGGGCAGAGACACTTaGTTGGATAGGATGGCCACCTTCCCTGTGGTGCTC +
Preference number: 6 (lower is better)
Translates to: SAEPYMEVGRDT*LDRMATFPVVL
Trigger: GAGCACCACAGGGAAGGTGGCCATCCTATCCAAGCAAGTGTCTCTGCCCACTTCCATGTATGGTTCTGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS GCA 72 bp AACACAGGTGGTGGATGTATTGGCCTCAGTGGTAGTTaGCAAAGCCTCCGCCAAACCCTCTACGATGCTCAG +
Preference number: 6 (lower is better)
Translates to: NTGGGCIGLSGS*QSLRQTLYDAQ
Trigger: CTGAGCATCGTAGAGGGTTTGGCGGAGGCTTTGGCAACTACCACTGAGGCCAATACATCCACCACCTGTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS CCA 72 bp GGTTCTCTGGTCCCACAAGAGGGTGATGTGCTCCTGTaGGAAATGCACCAGTGTGAAAAATCCCACTCGCCA +
Preference number: 6 (lower is better)
Translates to: GSLVPQEGDVLL*EMHQCEKSHSP
Trigger: TGGCGAGTGGGATTTTTCACACTGGTGCATTTCCCACAGGAGCACATCACCCTCTTGTGGGACCAGAGAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS CCA 72 bp GAGACACTTGCTTGGATAGGATGGCCACCTTCCCTGTaGTGCTCTTTCGTGGGACAACAGATACCATGGAGG +
Preference number: 6 (lower is better)
Translates to: ETLAWIGWPPSL*CSFVGQQIPWR
Trigger: CCTCCATGGTATCTGTTGTCCCACGAAAGAGCACCACAGGGAAGGTGGCCATCCTATCCAAGCAAGTGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS CCA 72 bp GCAAGTATTGCAGTCTTCCTTCACCACAGAGCCAGGTaGGTACAGAGTCCCGTGAAACTCACAGGGACACTC +
Preference number: 6 (lower is better)
Translates to: ASIAVFLHHRAR*VQSPVKLTGTL
Trigger: GAGTGTCCCTGTGAGTTTCACGGGACTCTGTACCCACCTGGCTCTGTGGTGAAGGAAGACTGCAATACTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399391.7
ENST00000399397.6
ENST00000498332.5
CDS CAA 72 bp ACTAGGTTCACAGGGGTGCTGCTCCTGCATTCATTCTaGCGGATGGTCATGCGGATGGTCACCTTCTTGCAG +
Preference number: 6 (lower is better)
Translates to: TRFTGVLLLHSF*RMVMRMVTFLQ
Trigger: CTGCAAGAAGGTGACCATCCGCATGACCATCCGCAAGAATGAATGCAGGAGCAGCACCCCTGTGAACCTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS CAA 90 bp AGCCTACGGATCTCAAAGGCATCATCTGTGTATGGCGGGATGATCTaGTACTGGTCAAACAGAAGGACATCCCCTGCCTGGGTCAGGGTC +
Preference number: 6 (lower is better)
Translates to: SLRISKASSVYGGMI*YWSNRRTSPAWVRV
Trigger: GACCCTGACCCAGGCAGGGGATGTCCTTCTGTTTGACCAGTACAAGATCATCCCGCCATACACAGATGATGCCTTTGAGATCCGTAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399391.7
ENST00000399397.6
ENST00000498332.5
CDS CCA 72 bp CAGAACCATACATGGAAGTGGGCAGAGACACTTGCTTaGATAGGATGGCCACCTTCCCTGTGGTGCTCTTTC +
Preference number: 6 (lower is better)
Translates to: QNHTWKWAETLA*IGWPPSLWCSF
Trigger: GAAAGAGCACCACAGGGAAGGTGGCCATCCTATCCAAGCAAGTGTCTCTGCCCACTTCCATGTATGGTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS CCA 72 bp AAGGCATCATCTGTGTATGGCGGGATGATCTTGTACTaGTCAAACAGAAGGACATCCCCTGCCTGGGTCAGG +
Preference number: 6 (lower is better)
Translates to: KASSVYGGMILY*SNRRTSPAWVR
Trigger: CCTGACCCAGGCAGGGGATGTCCTTCTGTTTGACCAGTACAAGATCATCCCGCCATACACAGATGATGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399391.7
ENST00000399397.6
ENST00000498332.5
CDS CAA 72 bp GCAGAACCATACATGGAAGTGGGCAGAGACACTTGCTaGGATAGGATGGCCACCTTCCCTGTGGTGCTCTTT +
Preference number: 6 (lower is better)
Translates to: AEPYMEVGRDTC*DRMATFPVVLF
Trigger: AAAGAGCACCACAGGGAAGGTGGCCATCCTATCCAAGCAAGTGTCTCTGCCCACTTCCATGTATGGTTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS CAA 90 bp TGCACCAGTGTGAAAAATCCCACTCGCCATGTGTGGACCTCCTGCTaGTCATCCAGGAAGCTCTCTGGACTAGGATTTCCGGAGTCATCA +
Preference number: 6 (lower is better)
Translates to: CTSVKNPTRHVWTSC*SSRKLSGLGFPESS
Trigger: TGATGACTCCGGAAATCCTAGTCCAGAGAGCTTCCTGGATGACAAGCAGGAGGTCCACACATGGCGAGTGGGATTTTTCACACTGGTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS CAA 90 bp TGGCAGATCTCAAACACCTCACTGAGCAGGATGCTGCACTCCTTCTaGGCAAATGGTTCTCGGAGAGGATTCAGGACACACATATCCCGA +
Preference number: 6 (lower is better)
Translates to: WQISNTSLSRMLHSF*ANGSRRGFRTHISR
Trigger: TCGGGATATGTGTGTCCTGAATCCTCTCCGAGAACCATTTGCCAAGAAGGAGTGCAGCATCCTGCTCAGTGAGGTGTTTGAGATCTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS TCA 72 bp CATCAACCACAGGGTGGCAGATCTCAAACACCTCACTaGGCAGGATGCTGCACTCCTTCTTGGCAAATGGTT +
Preference number: 6 (lower is better)
Translates to: HQPQGGRSQTPH*AGCCTPSWQMV
Trigger: AACCATTTGCCAAGAAGGAGTGCAGCATCCTGCTCAGTGAGGTGTTTGAGATCTGCCACCCTGTGGTTGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS CCA 72 bp AAATGCACCAGTGTGAAAAATCCCACTCGCCATGTGTaGACCTCCTGCTTGTCATCCAGGAAGCTCTCTGGA +
Preference number: 6 (lower is better)
Translates to: KCTSVKNPTRHV*TSCLSSRKLSG
Trigger: TCCAGAGAGCTTCCTGGATGACAAGCAGGAGGTCCACACATGGCGAGTGGGATTTTTCACACTGGTGCATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS CCA 72 bp TTTGCAGTCCAGTACATGGACGGTGAGCATTTCATCTaGGCTCTGGCTGAGGATGTAGATGGCCTCCTTGAA +
Preference number: 6 (lower is better)
Translates to: FAVQYMDGEHFI*ALAEDVDGLLE
Trigger: TTCAAGGAGGCCATCTACATCCTCAGCCAGAGCCCAGATGAAATGCTCACCGTCCATGTACTGGACTGCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS CAA 72 bp TCAAACACCTCACTGAGCAGGATGCTGCACTCCTTCTaGGCAAATGGTTCTCGGAGAGGATTCAGGACACAC +
Preference number: 6 (lower is better)
Translates to: SNTSLSRMLHSF*ANGSRRGFRTH
Trigger: GTGTGTCCTGAATCCTCTCCGAGAACCATTTGCCAAGAAGGAGTGCAGCATCCTGCTCAGTGAGGTGTTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS GCA 72 bp AGTGTGAAAAATCCCACTCGCCATGTGTGGACCTCCTaGTTGTCATCCAGGAAGCTCTCTGGACTAGGATTT +
Preference number: 6 (lower is better)
Translates to: SVKNPTRHVWTS*LSSRKLSGLGF
Trigger: AAATCCTAGTCCAGAGAGCTTCCTGGATGACAAGCAGGAGGTCCACACATGGCGAGTGGGATTTTTCACACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS CAA 72 bp ATCTCAAAGGCATCATCTGTGTATGGCGGGATGATCTaGTACTGGTCAAACAGAAGGACATCCCCTGCCTGG +
Preference number: 6 (lower is better)
Translates to: ISKASSVYGGMI*YWSNRRTSPAW
Trigger: CCAGGCAGGGGATGTCCTTCTGTTTGACCAGTACAAGATCATCCCGCCATACACAGATGATGCCTTTGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399391.7
ENST00000399397.6
ENST00000498332.5
CDS TCA 72 bp TACGGATCTCAAAGGCATCATCTGTGTATGGCGGGATaGTCTTGTACTGGTCAAACAGAAGGACATCCCCTG +
Preference number: 6 (lower is better)
Translates to: YGSQRHHLCMAG*SCTGQTEGHPL
Trigger: CAGGGGATGTCCTTCTGTTTGACCAGTACAAGATCATCCCGCCATACACAGATGATGCCTTTGAGATCCGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399391.7
ENST00000399397.6
ENST00000498332.5
CDS CCA 72 bp ATCTGGATGTCTGAGGGAGTCAGGATCATGTACATGTaGCCTGTGTCCTCAATTCTGAATCCATACCTGCTC +
Preference number: 6 (lower is better)
Translates to: IWMSEGVRIMYM*PVSSILNPYLL
Trigger: GAGCAGGTATGGATTCAGAATTGAGGACACAGGCCACATGTACATGATCCTGACTCCCTCAGACATCCAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS CCA 72 bp AGCAGAAAGTGTTTTCCAGGAATTGCCAAAAAGTTGTaGGGTGCTCTCAGGTACACCCACTGGAGACAGGAA +
Preference number: 6 (lower is better)
Translates to: SRKCFPGIAKKL*GALRYTHWRQE
Trigger: TTCCTGTCTCCAGTGGGTGTACCTGAGAGCACCCCACAACTTTTTGGCAATTCCTGGAAAACACTTTCTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399391.7
ENST00000399397.6
CDS CAA 72 bp TTAGTTAGCTCTAGGTTCTCCGGGGTCCTCATCTCATaGATGGTTTTTAAGTCAAAGTTCCCACAGAGGCCC +
Preference number: 6 (lower is better)
Translates to: LVSSRFSGVLIS*MVFKSKFPQRP
Trigger: GGGCCTCTGTGGGAACTTTGACTTAAAAACCATCAATGAGATGAGGACCCCGGAGAACCTAGAGCTAACTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS TCA 72 bp TGTAGCAGTTCACATTCTCTACAATCACAGAGAAGCTaGCATCTGATGTGCTCAGGTATGGCAAGGAGACAT +
Preference number: 6 (lower is better)
Translates to: CSSSHSLQSQRS*HLMCSGMARRH
Trigger: ATGTCTCCTTGCCATACCTGAGCACATCAGATGTCAGCTTCTCTGTGATTGTAGAGAATGTGAACTGCTACA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342528.2
CDS CAA 72 bp GAGTCATCATCAAAGACAATGAGTGAGTTCCCAACGTaGATGGAAATAAATTTCCTGCAGATCATGCCAGAG +
Preference number: 6 (lower is better)
Translates to: ESSSKTMSEFPT*MEINFLQIMPE
Trigger: CTCTGGCATGATCTGCAGGAAATTTATTTCCATCAACGTTGGGAACTCACTCATTGTCTTTGATGATGACTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6
CDS TCA 72 bp ACTAGGATTTCCGGAGTCATCATCAAAGACAATGAGTaGGTTCCCAACGTTGATGGAAATAAATTTCCTGCA +
Preference number: 6 (lower is better)
Translates to: TRISGVIIKDNE*VPNVDGNKFPA
Trigger: TGCAGGAAATTTATTTCCATCAACGTTGGGAACTCACTCATTGTCTTTGATGATGACTCCGGAAATCCTAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342528.2
ENST00000399391.7
ENST00000399397.6