RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OTOF (Homo sapiens)

Ensembl gene IDs: ENSG00000115155

Ensembl transcript IDs: ENST00000272371.7, ENST00000338581.10, ENST00000339598.8, ENST00000402415.8, ENST00000403946.7, ENST00000426958.1, ENST00000464574.1

Found 1442 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGCAGGGTCTaGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTCA +
Preference number: 1 (lower is better)
Translates to: PAVAEAAALGLVGRV*PLLRIKDRCYLQGS
Trigger: TGACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGACCCTGCCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
3UTR CCA 90 bp ACCCATGGTCCTTGGTTAATTTCACTAAAGCTTCAATCCTGTACTTaGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTGG +
Preference number: 1 (lower is better)
Translates to: THGPWLISLKLQSCT*KTWGGFQESSSGAW
Trigger: CCAGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAACCAAGGACCATGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
3UTR CCA 90 bp ACCTTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATaGTCCTTGGTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAA +
Preference number: 1 (lower is better)
Translates to: TFCSFILFKALGTDP*SLVNFTKASILYLE
Trigger: TTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAACCAAGGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAAGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
3UTR-3UTR CCA 90 bp TCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCAGGGGAGAGCGGCTGGCGGGAGCTaGCGGCCTTCATGCCCCAAG +
Preference number: 2 (lower is better)
Translates to: SAQGMKSGRWAPQAPQGRAAGGS*RPSCPK
Trigger: CTTGGGGCATGAAGGCCGCCAGCTCCCGCCAGCCGC...TCTCCCCTGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
3UTR-3UTR CCA 90 bp GGGCAGCACTTGACGGGCCAGCTCCCAGCTGCAGCTGAAAGGGCTGGAAGGGCAGGGCAAGCCGCAGCCTaGGGCAGTGAGGACAGGCGG +
Preference number: 2 (lower is better)
Translates to: GQHLTGQLPAAAERAGRAGQAAA*GSEDRR
Trigger: CCGCCTGTCCTCACTGCCCCAGGCTGCGGCTTGCCC...TGCCCTTCCAGCCCTTTCAGCTGCAGCTGGGAGCTGGCCCGTCAAGTGCTGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
3UTR-3UTR CCA 90 bp TGGGCAGGGTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTGCGGCTGGCGGGAGCTaGCGGCCTTCATGCCCCAAG +
Preference number: 2 (lower is better)
Translates to: WAGSGPCCGSKTGAICRGAAGGS*RPSCPK
Trigger: CTTGGGGCATGAAGGCCGCCAGCTCCCGCCAGCCGC...ACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGACCCTGCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
3UTR-3UTR CCA 90 bp CAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGGGCAAGCCGCAGCCTaGGGCAGTGAGGACAGGCGG +
Preference number: 2 (lower is better)
Translates to: QATPWEVRGAKWSPAVAEGQAAA*GSEDRR
Trigger: CCGCCTGTCCTCACTGCCCCAGGCTGCGGCTTGCCC...TTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
3UTR-3UTR CCA 90 bp AGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTCAGAGGGGCGGGACTaGGCAAGCCGCAGCCTGGGG +
Preference number: 2 (lower is better)
Translates to: SERSQVEPSSGRSSRAGTSEGRD*ASRSLG
Trigger: CCCCAGGCTGCGGCTTGCCCAGTCCCGCCCCTCTGA...AGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
3UTR-3UTR CCA 90 bp GGGCAGCACTTGACGGGCCAGCTCCCAGCTGCAGCTGAAAGGGCTGGAAGGGCAGGGCCTGAAGAAGGGTaGCGCCTCAGCCAGGTGGGG +
Preference number: 2 (lower is better)
Translates to: GQHLTGQLPAAAERAGRAGPEEG*RLSQVG
Trigger: CCCCACCTGGCTGAGGCGCCACCCTTCTTCAGGCCC...TGCCCTTCCAGCCCTTTCAGCTGCAGCTGGGAGCTGGCCCGTCAAGTGCTGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
3UTR-3UTR TCA 90 bp TGGGCAGGGTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTGCTCGGCCCAAGGCATaGAGAGTGGACGCTGGGCTC +
Preference number: 2 (lower is better)
Translates to: WAGSGPCCGSKTGAICRGARPKA*RVDAGL
Trigger: GAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGC...ACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGACCCTGCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
3UTR-3UTR TCA 90 bp GAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTTCTGGAGCCTGGGCCTaGAGAAGGGTGGCGCCTCAG +
Preference number: 2 (lower is better)
Translates to: ERSQVEPSSGRSSRAGTCSGAWA*RRVAPQ
Trigger: CTGAGGCGCCACCCTTCTTCAGGCCCAGGCTCCAGA...ACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
3UTR-3UTR GCA 90 bp GGGCAGCACTTGACGGGCCAGCTCCCAGCTGCAGCTGAAAGGGCTGGAAGGGCAGGGTCTGGCCCCTGCTaGGGATCAAAGACCGGTGCT +
Preference number: 2 (lower is better)
Translates to: GQHLTGQLPAAAERAGRAGSGPC*GSKTGA
Trigger: AGCACCGGTCTTTGATCCGCAGCAGGGGCCAGACCC...TGCCCTTCCAGCCCTTTCAGCTGCAGCTGGGAGCTGGCCCGTCAAGTGCTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
3UTR-3UTR TCA 90 bp TGGAAACCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGTCTGGAGCCTGGGCCTaGAGAAGGGTGGCGCCTCAG +
Preference number: 2 (lower is better)
Translates to: WKPTGRTGDPLGSERSQVSGAWA*RRVAPQ
Trigger: CTGAGGCGCCACCCTTCTTCAGGCCCAGGCTCCAGA...CACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGGTTTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
3UTR-3UTR GCA 90 bp GAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGTCTGGCCCCTGCTaGGGATCAAAGACCGGTGCT +
Preference number: 2 (lower is better)
Translates to: ERSQVEPSSGRSSRAGTCGSGPC*GSKTGA
Trigger: AGCACCGGTCTTTGATCCGCAGCAGGGGCCAGACCC...ACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
3UTR-3UTR GCA 90 bp GAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGCAGGGTCTGGCCCCTaGTGCGGATCAAAGACCGGT +
Preference number: 2 (lower is better)
Translates to: ERSQVEPSSGRSSRAGTCAGSGP*CGSKTG
Trigger: ACCGGTCTTTGATCCGCAGCAGGGGCCAGACCCTGC...ACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
3UTR-3UTR CCA 90 bp AGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGCCAAGGCATGAAGAGTaGACGCTGGGCTCCTCAGGC +
Preference number: 2 (lower is better)
Translates to: RSQVEPSSGRSSRAGTCGPRHEE*TLGSSG
Trigger: GCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGG...CCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
3UTR-3UTR CCA 90 bp AGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTGGCGCCTCAGCCAGGTaGGGCAAGAGAGACCCATTC +
Preference number: 2 (lower is better)
Translates to: SERSQVEPSSGRSSRAGTGASAR*GKRDPF
Trigger: GAATGGGTCTCTCTTGCCCCACCTGGCTGAGGCGCC...AGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
3UTR-3UTR CCA 90 bp GAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGCGCCTCAGCCAGGTaGGGCAAGAGAGACCCATTC +
Preference number: 2 (lower is better)
Translates to: ERSQVEPSSGRSSRAGTCGASAR*GKRDPF
Trigger: GAATGGGTCTCTCTTGCCCCACCTGGCTGAGGCGCC...ACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
3UTR-3UTR TCA 90 bp AGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGCCCCAAGGAGCTTTTTaGCCATGTAGCCAGGGAGGC +
Preference number: 2 (lower is better)
Translates to: RSQVEPSSGRSSRAGTCGPQGAF*PCSQGG
Trigger: GCCTCCCTGGCTACATGGTCAAAAAGCTCCTTGGGG...CCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
3UTR-3UTR GCA 90 bp GGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCAAGCTGGCGGCCTTCATaGCCCAAGGAGCTTTTTGAC +
Preference number: 2 (lower is better)
Translates to: GRLGPRHEEWTLGSSGSPSWRPS*PKELFD
Trigger: GTCAAAAAGCTCCTTGGGGCATGAAGGCCGCCAGCT...TGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
3UTR-3UTR CCA 90 bp GAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTCCAAGGCATGAAGAGTaGACGCTGGGCTCCTCAGGC +
Preference number: 2 (lower is better)
Translates to: ERSQVEPSSGRSSRAGTCPRHEE*TLGSSG
Trigger: GCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGG...ACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
3UTR-3UTR GCA 90 bp TGGAAACCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGAAGACCGGTGCTATCTaGAGGGGTCACGGCGGGGAT +
Preference number: 2 (lower is better)
Translates to: WKPTGRTGDPLGSERSQVKTGAI*RGHGGD
Trigger: ATCCCCGCCGTGACCCCTGCAGATAGCACCGGTCTT...CACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGGTTTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
3UTR-3UTR GCA 90 bp GAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTCGGATCAAAGACCGGTaGTATCTGCAGGGGTCACGG +
Preference number: 2 (lower is better)
Translates to: ERSQVEPSSGRSSRAGTCRIKDR*YLQGSR
Trigger: CCGTGACCCCTGCAGATAGCACCGGTCTTTGATCCG...ACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
3UTR-3UTR GCA 90 bp TGGGCAGGGTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTAGCTGGCGGCCTTCATaGCCCAAGGAGCTTTTTGAC +
Preference number: 2 (lower is better)
Translates to: WAGSGPCCGSKTGAICRGSWRPS*PKELFD
Trigger: GTCAAAAAGCTCCTTGGGGCATGAAGGCCGCCAGCT...ACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGACCCTGCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
3UTR-3UTR CCA 90 bp GGGCAGCACTTGACGGGCCAGCTCCCAGCTGCAGCTGAAAGGGCTGGAAGGGCATGTACTTGGAAGACCTaGGGAGGGTTTCAGGAGTCT +
Preference number: 2 (lower is better)
Translates to: GQHLTGQLPAAAERAGRACTWKT*GGFQES
Trigger: AGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACA...TGCCCTTCCAGCCCTTTCAGCTGCAGCTGGGAGCTGGCCCGTCAAGTGCTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
3UTR-3UTR CCA 90 bp AGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGTGTACTTGGAAGACCTaGGGAGGGTTTCAGGAGTCT +
Preference number: 2 (lower is better)
Translates to: RSQVEPSSGRSSRAGTCGCTWKT*GGFQES
Trigger: AGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACA...CCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
3UTR-3UTR TCA 90 bp GCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCAGGCCCCAAGGAGCTTTTTaGCCATGTAGCCAGGGAGGC +
Preference number: 2 (lower is better)
Translates to: APQGRWERVQATERKCGRPQGAF*PCSQGG
Trigger: GCCTCCCTGGCTACATGGTCAAAAAGCTCCTTGGGG...CCTGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
3UTR-3UTR CCA 90 bp AGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGTTCTTTTTAAAGCCCTaGGCACTGACCCATGGTCCT +
Preference number: 2 (lower is better)
Translates to: RSQVEPSSGRSSRAGTCGFFLKP*ALTHGP
Trigger: AGGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAA...CCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
3UTR-3UTR CCA 90 bp ATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTGGCTCCCCAGGGGAGATaGGAAAGAGTCCAAGCCACT +
Preference number: 2 (lower is better)
Translates to: ILYLEDLGRVSGVFLWSLAPQGR*ERVQAT
Trigger: AGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGC...CAGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
3UTR-3UTR CCA 90 bp TGGAAACCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGCTGGGCACTGACCCATaGTCCTTGGTTAATTTCACT +
Preference number: 2 (lower is better)
Translates to: WKPTGRTGDPLGSERSQVLGTDP*SLVNFT
Trigger: AGTGAAATTAACCAAGGACCATGGGTCAGTGCCCAG...CACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGGTTTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
3UTR-3UTR CCA 90 bp TGGAAACCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGTTCTTTTTAAAGCCCTaGGCACTGACCCATGGTCCT +
Preference number: 2 (lower is better)
Translates to: WKPTGRTGDPLGSERSQVFFLKP*ALTHGP
Trigger: AGGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAA...CACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGGTTTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
3UTR CAA 90 bp AGGAAGAGCCCCAACATGAGCAGCCCCAACAGCGCCAGCACGATCTaGATGATGAGCCACTTGTACCGGGTGCAGATGAGGTACTTGATG +
Preference number: 2 (lower is better)
Translates to: RKSPNMSSPNSASTI*MMSHLYRVQMRYLM
Trigger: CATCAAGTACCTCATCTGCACCCGGTACAAGTGGCTCATCATCAAGATCGTGCTGGCGCTGTTGGGGCTGCTCATGTTGGGGCTCTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
3UTR-3UTR TCA 90 bp ATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTGAAGAGTCCAAGCCACTaGAAGGAAATGCGGCAGGGC +
Preference number: 2 (lower is better)
Translates to: ILYLEDLGRVSGVFLWSLKSPSH*KEMRQG
Trigger: GCCCTGCCGCATTTCCTTTCAGTGGCTTGGACTCTT...CAGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
3UTR-3UTR CCA 90 bp GGGCAGCACTTGACGGGCCAGCTCCCAGCTGCAGCTGAAAGGGCTGGAAGGGCACTGACCCATGGTCCTTaGTTAATTTCACTAAAGCTT +
Preference number: 2 (lower is better)
Translates to: GQHLTGQLPAAAERAGRALTHGP*LISLKL
Trigger: AAGCTTTAGTGAAATTAACCAAGGACCATGGGTCAG...TGCCCTTCCAGCCCTTTCAGCTGCAGCTGGGAGCTGGCCCGTCAAGTGCTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
3UTR CAA 90 bp ATGAGCAGCCCCAACAGCGCCAGCACGATCTTGATGATGAGCCACTaGTACCGGGTGCAGATGAGGTACTTGATGGACTTGAGAGGGTTG +
Preference number: 2 (lower is better)
Translates to: MSSPNSASTILMMSH*YRVQMRYLMDLRGL
Trigger: CAACCCTCTCAAGTCCATCAAGTACCTCATCTGCACCCGGTACAAGTGGCTCATCATCAAGATCGTGCTGGCGCTGTTGGGGCTGCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
3UTR-3UTR TCA 90 bp TCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTGGAAGAGCCCCAACATaGGCAGCCCCAACAGCGCCA +
Preference number: 2 (lower is better)
Translates to: SLKLQSCTWKTWGGFQESGRAPT*AAPTAP
Trigger: TGGCGCTGTTGGGGCTGCTCATGTTGGGGCTCTTCC...AGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
3UTR-3UTR TCA 90 bp GATACCTTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCGGAAGAGCCCCAACATaGGCAGCCCCAACAGCGCCA +
Preference number: 2 (lower is better)
Translates to: DTFCSFILFKALGTDPWSGRAPT*AAPTAP
Trigger: TGGCGCTGTTGGGGCTGCTCATGTTGGGGCTCTTCC...GGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAAGGTATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
3UTR-3UTR TCA 90 bp TTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCTTGGTTGCTCGGCCCAAGGCATaGAGAGTGGACGCTGGGCTC +
Preference number: 2 (lower is better)
Translates to: FCSFILFKALGTDPWSLVARPKA*RVDAGL
Trigger: GAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGC...AACCAAGGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
3UTR-3UTR TCA 90 bp GACCCATGGTCCTTGGTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACGCTCGGCCCAAGGCATaGAGAGTGGACGCTGGGCTC +
Preference number: 2 (lower is better)
Translates to: DPWSLVNFTKASILYLEDARPKA*RVDAGL
Trigger: GAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGC...GTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAACCAAGGACCATGGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
3UTR-3UTR CCA 90 bp TCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTGCTCCCCAGGGGAGATaGGAAAGAGTCCAAGCCACT +
Preference number: 2 (lower is better)
Translates to: SLKLQSCTWKTWGGFQESAPQGR*ERVQAT
Trigger: AGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGC...AGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
3UTR-3UTR CCA 90 bp GATACCTTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCGCTCCCCAGGGGAGATaGGAAAGAGTCCAAGCCACT +
Preference number: 2 (lower is better)
Translates to: DTFCSFILFKALGTDPWSAPQGR*ERVQAT
Trigger: AGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGC...GGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAAGGTATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
3UTR-3UTR CCA 90 bp AATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGACCAAGGCATGAAGAGTaGACGCTGGGCTCCTCAGGC +
Preference number: 2 (lower is better)
Translates to: NFTKASILYLEDLGRVSGPRHEE*TLGSSG
Trigger: GCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGG...TCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
3UTR CAA 90 bp GACCCATGGTCCTTGGTTAATTTCACTAAAGCTTCAATCCTGTACTaGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTG +
Preference number: 2 (lower is better)
Translates to: DPWSLVNFTKASILY*EDLGRVSGVFLWSL
Trigger: CAGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAACCAAGGACCATGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
3UTR-3UTR CCA 90 bp GACCCATGGTCCTTGGTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCCAAGGCATGAAGAGTaGACGCTGGGCTCCTCAGGC +
Preference number: 2 (lower is better)
Translates to: DPWSLVNFTKASILYLEDPRHEE*TLGSSG
Trigger: GCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGG...GTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAACCAAGGACCATGGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
3UTR-3UTR GCA 90 bp GACCCATGGTCCTTGGTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACAGCTGGCGGCCTTCATaGCCCAAGGAGCTTTTTGAC +
Preference number: 2 (lower is better)
Translates to: DPWSLVNFTKASILYLEDSWRPS*PKELFD
Trigger: GTCAAAAAGCTCCTTGGGGCATGAAGGCCGCCAGCT...GTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAACCAAGGACCATGGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
3UTR CAA 90 bp TGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCTaGGTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTG +
Preference number: 2 (lower is better)
Translates to: CSFILFKALGTDPWS*VNFTKASILYLEDL
Trigger: CAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAACCAAGGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
3UTR CCA 72 bp CCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTaGGACTTGTGGGCAGGGTCTGGCCCCTGCTGCGGA +
Preference number: 3 (lower is better)
Translates to: PSGAQQWQKQPR*DLWAGSGPCCG
Trigger: TCCGCAGCAGGGGCCAGACCCTGCCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
3UTR CCA 72 bp GCAGAAGCAGCCGCGCTGGGACTTGTGGGCAGGGTCTaGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTG +
Preference number: 3 (lower is better)
Translates to: AEAAALGLVGRV*PLLRIKDRCYL
Trigger: CAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGACCCTGCCCACAAGTCCCAGCGCGGCTGCTTCTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
3UTR-3UTR CAA 90 bp CCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCGCTTCAATCCTGTACTaGGAAGACCTGGGGAGGGTT +
Preference number: 3 (lower is better)
Translates to: PTGRTGDPLGSERSQVEPASILY*EDLGRV
Trigger: AACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGC...GGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
3UTR-3UTR CAA 90 bp GTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTCACGGCGGTTGATGATGAGCCACTaGTACCGGGTGCAGATGAGG +
Preference number: 3 (lower is better)
Translates to: VWPLLRIKDRCYLQGSRRLMMSH*YRVQMR
Trigger: CCTCATCTGCACCCGGTACAAGTGGCTCATCATCAA...CCGCCGTGACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
3UTR-3UTR CAA 90 bp TCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCAGGGGAGAGTGCAGATGAGGTACTaGATGGACTTGAGAGGGTTG +
Preference number: 3 (lower is better)
Translates to: SAQGMKSGRWAPQAPQGRVQMRY*MDLRGL
Trigger: CAACCCTCTCAAGTCCATCAAGTACCTCATCTGCAC...TCTCCCCTGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
3UTR-3UTR CAA 90 bp CAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAATTGATGATGAGCCACTaGTACCGGGTGCAGATGAGG +
Preference number: 3 (lower is better)
Translates to: QATPWEVRGAKWSPAVAELMMSH*YRVQMR
Trigger: CCTCATCTGCACCCGGTACAAGTGGCTCATCATCAA...TTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
3UTR-3UTR CAA 90 bp TGGGCAGGGTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTTTGATGATGAGCCACTaGTACCGGGTGCAGATGAGG +
Preference number: 3 (lower is better)
Translates to: WAGSGPCCGSKTGAICRGLMMSH*YRVQMR
Trigger: CCTCATCTGCACCCGGTACAAGTGGCTCATCATCAA...ACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGACCCTGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
3UTR-3UTR CAA 90 bp TGGGCAGGGTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTAGCGCCAGCACGATCTaGATGATGAGCCACTTGTAC +
Preference number: 3 (lower is better)
Translates to: WAGSGPCCGSKTGAICRGSASTI*MMSHLY
Trigger: GTACAAGTGGCTCATCATCAAGATCGTGCTGGCGCT...ACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGACCCTGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
3UTR-3UTR CAA 90 bp CAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAAGGTACTTGATGGACTaGAGAGGGTTGAGGAACCAG +
Preference number: 3 (lower is better)
Translates to: QATPWEVRGAKWSPAVAERYLMD*RGLRNQ
Trigger: CTGGTTCCTCAACCCTCTCAAGTCCATCAAGTACCT...TTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
3UTR-3UTR CAA 90 bp TGGGCAGGGTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTGTGCAGATGAGGTACTaGATGGACTTGAGAGGGTTG +
Preference number: 3 (lower is better)
Translates to: WAGSGPCCGSKTGAICRGVQMRY*MDLRGL
Trigger: CAACCCTCTCAAGTCCATCAAGTACCTCATCTGCAC...ACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGACCCTGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
3UTR-3UTR CAA 90 bp TGGAAACCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGAGGTACTTGATGGACTaGAGAGGGTTGAGGAACCAG +
Preference number: 3 (lower is better)
Translates to: WKPTGRTGDPLGSERSQVRYLMD*RGLRNQ
Trigger: CTGGTTCCTCAACCCTCTCAAGTCCATCAAGTACCT...CACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGGTTTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
3UTR-3UTR CAA 90 bp GAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTACTGACCCATGGTCCTaGGTTAATTTCACTAAAGCT +
Preference number: 3 (lower is better)
Translates to: ERSQVEPSSGRSSRAGTCTDPWS*VNFTKA
Trigger: AGCTTTAGTGAAATTAACCAAGGACCATGGGTCAGT...ACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
3UTR GCA 72 bp TGGACACACAATCAAGCTCAGCCCCCGACAGTCACATaGCAAAGGAGGCTCTTAGTGTCCTTTTCTCTCGGG +
Preference number: 3 (lower is better)
Translates to: WTHNQAQPPTVT*QRRLLVSFSLG
Trigger: CCCGAGAGAAAAGGACACTAAGAGCCTCCTTTGGCATGTGACTGTCGGGGGCTGAGCTTGATTGTGTGTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426958.1
3UTR-3UTR CAA 90 bp AATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTAGCGCCAGCACGATCTaGATGATGAGCCACTTGTAC +
Preference number: 3 (lower is better)
Translates to: NPVLGRPGEGFRSLPLEPSASTI*MMSHLY
Trigger: GTACAAGTGGCTCATCATCAAGATCGTGCTGGCGCT...AGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
3UTR CCA 72 bp ATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTaGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTGG +
Preference number: 3 (lower is better)
Translates to: ISLKLQSCTWKT*GGFQESSSGAW
Trigger: CCAGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
3UTR-3UTR CAA 90 bp TCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTAGGTACTTGATGGACTaGAGAGGGTTGAGGAACCAG +
Preference number: 3 (lower is better)
Translates to: SLKLQSCTWKTWGGFQESRYLMD*RGLRNQ
Trigger: CTGGTTCCTCAACCCTCTCAAGTCCATCAAGTACCT...AGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
3UTR-3UTR CAA 90 bp TTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCTTGGTTGCTTCAATCCTGTACTaGGAAGACCTGGGGAGGGTT +
Preference number: 3 (lower is better)
Translates to: FCSFILFKALGTDPWSLVASILY*EDLGRV
Trigger: AACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGC...AACCAAGGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
3UTR-3UTR CAA 90 bp GTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAAGCGCCAGCACGATCTaGATGATGAGCCACTTGTAC +
Preference number: 3 (lower is better)
Translates to: VNFTKASILYLEDLGRVSSASTI*MMSHLY
Trigger: GTACAAGTGGCTCATCATCAAGATCGTGCTGGCGCT...TGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
3UTR CCA 72 bp CCTTGGTTAATTTCACTAAAGCTTCAATCCTGTACTTaGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCT +
Preference number: 3 (lower is better)
Translates to: PWLISLKLQSCT*KTWGGFQESSS
Trigger: AGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAACCAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGCCGATCCGGTCGCCCCTaGCCCGCAGCTCCGAGACTG +
Preference number: 4 (lower is better)
Translates to: GAKWSPAVAEAAALGLVGRSGRP*PAAPRL
Trigger: CAGTCTCGGAGCTGCGGGGCAGGGGCGACCGGATCG...GCCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR GCA 90 bp GGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGCCACCAGGCGGCAGCCTaGGCGGGGGATGTCCTCCCA +
Preference number: 4 (lower is better)
Translates to: GAKWSPAVAEAAALGLVGHQAAA*AGDVLP
Trigger: TGGGAGGACATCCCCCGCGCAGGCTGCCGCCTGGTG...GCCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GAGGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCGGGGGCCGAGCGGTCTaGGGGCCGGTAGATGAAGCG +
Preference number: 4 (lower is better)
Translates to: EAGSAQGMKSGRWAPQAPGGRAV*GPVDEA
Trigger: CGCTTCATCTACCGGCCCCCAGACCGCTCGGCCCCC...GGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp CCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCCCGTGGTGTTCCAGCTaGGGGCCGAGCGGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: PTGRTGDPLGSERSQVEPPWCSS*GPSGLG
Trigger: CCCCAGACCGCTCGGCCCCCAGCTGGAACACCACGG...GGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GAGGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCCGTGGTGTTCCAGCTaGGGGCCGAGCGGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: EAGSAQGMKSGRWAPQAPPWCSS*GPSGLG
Trigger: CCCCAGACCGCTCGGCCCCCAGCTGGAACACCACGG...GGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCAGCGGCTGGCGGGAGCTaGCGGCCTTCATGCCCCAAG +
Preference number: 4 (lower is better)
Translates to: GRLGPRHEEWTLGSSGSPAAGGS*RPSCPK
Trigger: CTTGGGGCATGAAGGCCGCCAGCTCCCGCCAGCCGC...TGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGCGGGCAAGCCGCAGCCTaGGGCAGTGAGGACAGGCGG +
Preference number: 4 (lower is better)
Translates to: GAKWSPAVAEAAALGLVGGQAAA*GSEDRR
Trigger: CCGCCTGTCCTCACTGCCCCAGGCTGCGGCTTGCCC...GCCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GAGGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCGGGCAAGCCGCAGCCTaGGGCAGTGAGGACAGGCGG +
Preference number: 4 (lower is better)
Translates to: EAGSAQGMKSGRWAPQAPGQAAA*GSEDRR
Trigger: CCGCCTGTCCTCACTGCCCCAGGCTGCGGCTTGCCC...GGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCCTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCATCAGAGGGGCGGGACTaGGCAAGCCGCAGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: GRLGPRHEEWTLGSSGSPSEGRD*ASRSLG
Trigger: CCCCAGGCTGCGGCTTGCCCAGTCCCGCCCCTCTGA...TGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp CCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCCCGGCTTGTCGGGGTTaGGCAGCGGCCTCGTCTCCA +
Preference number: 4 (lower is better)
Translates to: PTGRTGDPLGSERSQVEPPACRG*AAASSP
Trigger: TGGAGACGAGGCCGCTGCTCAACCCCGACAAGCCGG...GGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCATTGTCCCGCACCGTGTaGCGCTTCACCTGGGCCCGC +
Preference number: 4 (lower is better)
Translates to: GRLGPRHEEWTLGSSGSPLSRTV*RFTWAR
Trigger: GCGGGCCCAGGTGAAGCGGCACACGGTGCGGGACAA...TGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GAGGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCGAAGCTCTTCTCTCCTaGGGGCCGGGAGCTGGGCCG +
Preference number: 4 (lower is better)
Translates to: EAGSAQGMKSGRWAPQAPEALLS*GPGAGP
Trigger: CGGCCCAGCTCCCGGCCCCCAGGAGAGAAGAGCTTC...GGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CCA 90 bp GGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCAGTGTGCCGCTTCACCTaGGCCCGCAGCATCCTGGCC +
Preference number: 4 (lower is better)
Translates to: GRLGPRHEEWTLGSSGSPVCRFT*ARSILA
Trigger: GGCCAGGATGCTGCGGGCCCAGGTGAAGCGGCACAC...TGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGCCTCGATGTCCACCCGTaGCCGGTCCACCTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: GAKWSPAVAEAAALGLVGLDVHP*PVHLGQ
Trigger: CTGGCCCAGGTGGACCGGCCACGGGTGGACATCGAG...GCCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp CCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCCCAGGGGGCCCAAAGTaGGGGCCGTCCACTTTGCCG +
Preference number: 4 (lower is better)
Translates to: PTGRTGDPLGSERSQVEPPGGPK*GPSTLP
Trigger: CGGCAAAGTGGACGGCCCCCACTTTGGGCCCCCTGG...GGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp AGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGGCGGCTGGCGGGAGCTaGCGGCCTTCATGCCCCAAG +
Preference number: 4 (lower is better)
Translates to: RSQVEPSSGRSSRAGTCGAAGGS*RPSCPK
Trigger: CTTGGGGCATGAAGGCCGCCAGCTCCCGCCAGCCGC...CCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTCACGGCGGGCGGCTGGCGGGAGCTaGCGGCCTTCATGCCCCAAG +
Preference number: 4 (lower is better)
Translates to: VWPLLRIKDRCYLQGSRRAAGGS*RPSCPK
Trigger: CTTGGGGCATGAAGGCCGCCAGCTCCCGCCAGCCGC...CCGCCGTGACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp TCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCAGGGGAGATCAGAGGGGCGGGACTaGGCAAGCCGCAGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: SAQGMKSGRWAPQAPQGRSEGRD*ASRSLG
Trigger: CCCCAGGCTGCGGCTTGCCCAGTCCCGCCCCTCTGA...TCTCCCCTGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTCACGGCGGTCAGAGGGGCGGGACTaGGCAAGCCGCAGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: VWPLLRIKDRCYLQGSRRSEGRD*ASRSLG
Trigger: CCCCAGGCTGCGGCTTGCCCAGTCCCGCCCCTCTGA...CCGCCGTGACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp GGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCACCCTCATGCAGGACTTaGGGCGCTCCCGGTCAAGCC +
Preference number: 4 (lower is better)
Translates to: GRLGPRHEEWTLGSSGSPPSCRT*GAPGQA
Trigger: GGCTTGACCGGGAGCGCCTCAAGTCCTGCATGAGGG...TGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp GTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTCACGGCGGGCGGGCAAAGGGGTCTaGGAGTCCGCTGCTGTCGGC +
Preference number: 4 (lower is better)
Translates to: VWPLLRIKDRCYLQGSRRAGKGV*ESAAVG
Trigger: GCCGACAGCAGCGGACTCTCAGACCCCTTTGCCCGC...CCGCCGTGACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp GGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGCCCATGGGCACGGGCATaGTGGGACCTCGGTCCACGT +
Preference number: 4 (lower is better)
Translates to: GAKWSPAVAEAAALGLVGPWARA*WDLGPR
Trigger: ACGTGGACCGAGGTCCCATCATGCCCGTGCCCATGG...GCCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp CCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCCCACTCGGTACTTGCTaGGCACGGGCCGGATGCCCA +
Preference number: 4 (lower is better)
Translates to: PTGRTGDPLGSERSQVEPPLGTC*ARAGCP
Trigger: TGGGCATCCGGCCCGTGCTCAGCAAGTACCGAGTGG...GGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp GGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGCCCCAGATCTGCAGGGTaGGCCGCGCGGGGATCTTGT +
Preference number: 4 (lower is better)
Translates to: GAKWSPAVAEAAALGLVGPRSAG*AARGSC
Trigger: ACAAGATCCCCGCGCGGCTCACCCTGCAGATCTGGG...GCCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp CCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCCCCAGATCTGCAGGGTaGGCCGCGCGGGGATCTTGT +
Preference number: 4 (lower is better)
Translates to: PTGRTGDPLGSERSQVEPPRSAG*AARGSC
Trigger: ACAAGATCCCCGCGCGGCTCACCCTGCAGATCTGGG...GGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGG
68% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp GAGGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCTCTGGAGCCTGGGCCTaGAGAAGGGTGGCGCCTCAG +
Preference number: 4 (lower is better)
Translates to: EAGSAQGMKSGRWAPQAPSGAWA*RRVAPQ
Trigger: CTGAGGCGCCACCCTTCTTCAGGCCCAGGCTCCAGA...GGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp GGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGCCGACCCCCTGGGAAGTaGGAGGAGCCAAGTGGAGCC +
Preference number: 4 (lower is better)
Translates to: GAKWSPAVAEAAALGLVGRPPGK*EEPSGA
Trigger: GGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCG...GCCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp GAGGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCGACCCCCTGGGAAGTaGGAGGAGCCAAGTGGAGCC +
Preference number: 4 (lower is better)
Translates to: EAGSAQGMKSGRWAPQAPRPPGK*EEPSGA
Trigger: GGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCG...GGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp CCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCCCCGGTCAAGCCTGGTaGGGGATGAGTGGCCCTGGT +
Preference number: 4 (lower is better)
Translates to: PTGRTGDPLGSERSQVEPPGQAW*GMSGPG
Trigger: ACCAGGGCCACTCATCCCGCACCAGGCTTGACCGGG...GGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGG
68% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GAGGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCCCGGTCAAGCCTGGTaGGGGATGAGTGGCCCTGGT +
Preference number: 4 (lower is better)
Translates to: EAGSAQGMKSGRWAPQAPPGQAW*GMSGPG
Trigger: ACCAGGGCCACTCATCCCGCACCAGGCTTGACCGGG...GGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCCTC
68% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTCACGGCGGTTGTCCCGCACCGTGTaGCGCTTCACCTGGGCCCGC +
Preference number: 4 (lower is better)
Translates to: VWPLLRIKDRCYLQGSRRLSRTV*RFTWAR
Trigger: GCGGGCCCAGGTGAAGCGGCACACGGTGCGGGACAA...CCGCCGTGACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp CCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCCTGCACTGTCCAGCCTaGCGAGCCGAAGCCCCGCTT +
Preference number: 4 (lower is better)
Translates to: PTGRTGDPLGSERSQVEPLHCPA*RAEAPL
Trigger: AAGCGGGGCTTCGGCTCGGCAGGCTGGACAGTGCAG...GGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GAGGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCTGCACTGTCCAGCCTaGCGAGCCGAAGCCCCGCTT +
Preference number: 4 (lower is better)
Translates to: EAGSAQGMKSGRWAPQAPLHCPA*RAEAPL
Trigger: AAGCGGGGCTTCGGCTCGGCAGGCTGGACAGTGCAG...GGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCACGGCGGCAAAGAGGCTaGGGGCCTGGTACATGTGCG +
Preference number: 4 (lower is better)
Translates to: GRLGPRHEEWTLGSSGSPRRQRG*GPGTCA
Trigger: CGCACATGTACCAGGCCCGCAGCCTCTTTGCCGCCG...TGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGCAGTAGGTCTGGGCGATaGCGCAGGTGGCGCGGTGCT +
Preference number: 4 (lower is better)
Translates to: GAKWSPAVAEAAALGLVGSRSGR*RRWRGA
Trigger: AGCACCGCGCCACCTGCGGCATCGCCCAGACCTACT...GCCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGCGGGGGCCGTCCACTTTaGCGTCTTTGCAGAGGCGGG +
Preference number: 4 (lower is better)
Translates to: GAKWSPAVAEAAALGLVGGGRPL*RLCRGG
Trigger: CCCGCCTCTGCAAAGACGGCAAAGTGGACGGCCCCC...GCCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp CAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAACACCAGGCGGCAGCCTaGGCGGGGGATGTCCTCCCA +
Preference number: 4 (lower is better)
Translates to: QATPWEVRGAKWSPAVAEHQAAA*AGDVLP
Trigger: TGGGAGGACATCCCCCGCGCAGGCTGCCGCCTGGTG...TTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp AGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTCACCAGGCGGCAGCCTaGGCGGGGGATGTCCTCCCA +
Preference number: 4 (lower is better)
Translates to: SERSQVEPSSGRSSRAGTHQAAA*AGDVLP
Trigger: TGGGAGGACATCCCCCGCGCAGGCTGCCGCCTGGTG...AGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp AGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGTCCGCATCCCAGATCTaGAGGGTGAGCCGCGCGGGG +
Preference number: 4 (lower is better)
Translates to: RSQVEPSSGRSSRAGTCGSASQI*RVSRAG
Trigger: CCCCGCGCGGCTCACCCTGCAGATCTGGGATGCGGA...CCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp CCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCGGGGGTCAGGTTCATTaGGGGCCAGGCCCACTGGGT +
Preference number: 4 (lower is better)
Translates to: PTGRTGDPLGSERSQVEPGGQVH*GPGPLG
Trigger: ACCCAGTGGGCCTGGCCCGCAATGAACCTGACCCCC...GGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GGGCAGCACTTGACGGGCCAGCTCCCAGCTGCAGCTGAAAGGGCTGGAAGGGCAGCTGGGCCGGGAGCCTaGGAGCAGTCCATCCGTCTC +
Preference number: 4 (lower is better)
Translates to: GQHLTGQLPAAAERAGRAAGPGA*EQSIRL
Trigger: GAGACGGATGGACTGCTCCCAGGCTCCCGGCCCAGC...TGCCCTTCCAGCCCTTTCAGCTGCAGCTGGGAGCTGGCCCGTCAAGTGCTGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CCA 90 bp CCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCGCTCCCGGTCAAGCCTaGTGCGGGATGAGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: PTGRTGDPLGSERSQVEPAPGQA*CGMSGP
Trigger: AGGGCCACTCATCCCGCACCAGGCTTGACCGGGAGC...GGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCAGCTCCCGGTCAAGCCTaGTGCGGGATGAGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: GRLGPRHEEWTLGSSGSPAPGQA*CGMSGP
Trigger: AGGGCCACTCATCCCGCACCAGGCTTGACCGGGAGC...TGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp TCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCAGGGGAGAGTGTGCCGCTTCACCTaGGCCCGCAGCATCCTGGCC +
Preference number: 4 (lower is better)
Translates to: SAQGMKSGRWAPQAPQGRVCRFT*ARSILA
Trigger: GGCCAGGATGCTGCGGGCCCAGGTGAAGCGGCACAC...TCTCCCCTGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGCGCTGCCTTGACCTCCTaGAAGCCACAGGGCAGGCCG +
Preference number: 4 (lower is better)
Translates to: GAKWSPAVAEAAALGLVGAALTS*KPQGRP
Trigger: CGGCCTGCCCTGTGGCTTCCAGGAGGTCAAGGCAGC...GCCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp CCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCAGGTGGGAAGCGGGGTaGGCAGTACGCCTCGTCTGC +
Preference number: 4 (lower is better)
Translates to: PTGRTGDPLGSERSQVEPRWEAG*AVRLVC
Trigger: GCAGACGAGGCGTACTGCCCACCCCGCTTCCCACCT...GGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GAGGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCAGGTGGGAAGCGGGGTaGGCAGTACGCCTCGTCTGC +
Preference number: 4 (lower is better)
Translates to: EAGSAQGMKSGRWAPQAPRWEAG*AVRLVC
Trigger: GCAGACGAGGCGTACTGCCCACCCCGCTTCCCACCT...GGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GGGCAGCACTTGACGGGCCAGCTCCCAGCTGCAGCTGAAAGGGCTGGAAGGGCACTCGATGTCCACCCGTaGCCGGTCCACCTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: GQHLTGQLPAAAERAGRALDVHP*PVHLGQ
Trigger: CTGGCCCAGGTGGACCGGCCACGGGTGGACATCGAG...TGCCCTTCCAGCCCTTTCAGCTGCAGCTGGGAGCTGGCCCGTCAAGTGCTGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp AGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTGGGGGCCGAGCGGTCTaGGGGCCGGTAGATGAAGCG +
Preference number: 4 (lower is better)
Translates to: SERSQVEPSSGRSSRAGTGGRAV*GPVDEA
Trigger: CGCTTCATCTACCGGCCCCCAGACCGCTCGGCCCCC...AGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCAGGGTCAGGATCTGGCTaGGCTTCATGGGGTCCCGCC +
Preference number: 4 (lower is better)
Translates to: GRLGPRHEEWTLGSSGSPGSGSG*ASWGPA
Trigger: GGCGGGACCCCATGAAGCCCAGCCAGATCCTGACCC...TGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCACGTCTCCACATGCTCTaGCACCAGGCGGCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: GRLGPRHEEWTLGSSGSPRLHML*HQAAAC
Trigger: GCAGGCTGCCGCCTGGTGCCAGAGCATGTGGAGACG...TGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp AGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTGCGGCTGGCGGGAGCTaGCGGCCTTCATGCCCCAAG +
Preference number: 4 (lower is better)
Translates to: SERSQVEPSSGRSSRAGTAAGGS*RPSCPK
Trigger: CTTGGGGCATGAAGGCCGCCAGCTCCCGCCAGCCGC...AGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp TCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCAGGGGAGAGGGCCTGAAGAAGGGTaGCGCCTCAGCCAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: SAQGMKSGRWAPQAPQGRGPEEG*RLSQVG
Trigger: CCCCACCTGGCTGAGGCGCCACCCTTCTTCAGGCCC...TCTCCCCTGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp CCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCAGTGGAGCCCAGCAGTaGCAGAAGCAGCCGCGCTGG +
Preference number: 4 (lower is better)
Translates to: PTGRTGDPLGSERSQVEPSGAQQ*QKQPRW
Trigger: CCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACT...GGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGCAGGGTGTGCCCGGGATaGGGAGTCCCCTCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: GAKWSPAVAEAAALGLVGRVCPG*GVPSAA
Trigger: AGCAGCAGAGGGGACTCCCCATCCCGGGCACACCCT...GCCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp CCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCAAGCCTGGTGCGGGATaGGTGGCCCTGGTCCTTGTC +
Preference number: 4 (lower is better)
Translates to: PTGRTGDPLGSERSQVEPKPGAG*VALVLV
Trigger: GACAAGGACCAGGGCCACTCATCCCGCACCAGGCTT...GGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp TGGGCAGGGTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTGCGGGCAAAGGGGTCTaGGAGTCCGCTGCTGTCGGC +
Preference number: 4 (lower is better)
Translates to: WAGSGPCCGSKTGAICRGAGKGV*ESAAVG
Trigger: GCCGACAGCAGCGGACTCTCAGACCCCTTTGCCCGC...ACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGACCCTGCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp AGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTGCGGGCAAAGGGGTCTaGGAGTCCGCTGCTGTCGGC +
Preference number: 4 (lower is better)
Translates to: SERSQVEPSSGRSSRAGTAGKGV*ESAAVG
Trigger: GCCGACAGCAGCGGACTCTCAGACCCCTTTGCCCGC...AGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp AGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGCCATGGGCACGGGCATaGTGGGACCTCGGTCCACGT +
Preference number: 4 (lower is better)
Translates to: RSQVEPSSGRSSRAGTCGPWARA*WDLGPR
Trigger: ACGTGGACCGAGGTCCCATCATGCCCGTGCCCATGG...CCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp GGGCAGCACTTGACGGGCCAGCTCCCAGCTGCAGCTGAAAGGGCTGGAAGGGCACCACTCGGTACTTGCTaGGCACGGGCCGGATGCCCA +
Preference number: 4 (lower is better)
Translates to: GQHLTGQLPAAAERAGRAPLGTC*ARAGCP
Trigger: TGGGCATCCGGCCCGTGCTCAGCAAGTACCGAGTGG...TGCCCTTCCAGCCCTTTCAGCTGCAGCTGGGAGCTGGCCCGTCAAGTGCTGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp CCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCCGCAGAGGGAGCCCTTaGAGCGTCCCACAATGCGCT +
Preference number: 4 (lower is better)
Translates to: PTGRTGDPLGSERSQVEPRRGSP*SVPQCA
Trigger: AGCGCATTGTGGGACGCTTCAAGGGCTCCCTCTGCG...GGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp GGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCATCTCAGAGGGCCCAGTaGAGACGCGGTTGGCCACCT +
Preference number: 4 (lower is better)
Translates to: GRLGPRHEEWTLGSSGSPSQRAQ*RRGWPP
Trigger: AGGTGGCCAACCGCGTCTTCACTGGGCCCTCTGAGA...TGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp TGGGCAGGGTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTCCGGCTTGTCGGGGTTaGGCAGCGGCCTCGTCTCCA +
Preference number: 4 (lower is better)
Translates to: WAGSGPCCGSKTGAICRGPACRG*AAASSP
Trigger: TGGAGACGAGGCCGCTGCTCAACCCCGACAAGCCGG...ACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGACCCTGCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp AGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTCCGGCTTGTCGGGGTTaGGCAGCGGCCTCGTCTCCA +
Preference number: 4 (lower is better)
Translates to: SERSQVEPSSGRSSRAGTPACRG*AAASSP
Trigger: TGGAGACGAGGCCGCTGCTCAACCCCGACAAGCCGG...AGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp GGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGCCTTGGGCTTCCGAGGTaGGATGTCCAGAGGCGTCCC +
Preference number: 4 (lower is better)
Translates to: GAKWSPAVAEAAALGLVGLGLPR*DVQRRP
Trigger: GGGACGCCTCTGGACATCTCACCTCGGAAGCCCAAG...GCCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp GTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTCACGGCGGCCCAGATCTGCAGGGTaGGCCGCGCGGGGATCTTGT +
Preference number: 4 (lower is better)
Translates to: VWPLLRIKDRCYLQGSRRPRSAG*AARGSC
Trigger: ACAAGATCCCCGCGCGGCTCACCCTGCAGATCTGGG...CCGCCGTGACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp GGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGCGGAAGAGCCCCAACATaGGCAGCCCCAACAGCGCCA +
Preference number: 4 (lower is better)
Translates to: GAKWSPAVAEAAALGLVGGRAPT*AAPTAP
Trigger: TGGCGCTGTTGGGGCTGCTCATGTTGGGGCTCTTCC...GCCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp GGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCAGGAAGAGCCCCAACATaGGCAGCCCCAACAGCGCCA +
Preference number: 4 (lower is better)
Translates to: GRLGPRHEEWTLGSSGSPGRAPT*AAPTAP
Trigger: TGGCGCTGTTGGGGCTGCTCATGTTGGGGCTCTTCC...TGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp TCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCAGGGGAGAGCTCGGCCCAAGGCATaGAGAGTGGACGCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: SAQGMKSGRWAPQAPQGRARPKA*RVDAGL
Trigger: GAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGC...TCTCCCCTGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp TCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCAGGGGAGACGACCCCCTGGGAAGTaGGAGGAGCCAAGTGGAGCC +
Preference number: 4 (lower is better)
Translates to: SAQGMKSGRWAPQAPQGRRPPGK*EEPSGA
Trigger: GGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCG...TCTCCCCTGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp GAGGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCGCCACCTCTGGGCTGTaGGTCTGTGGCTCTGGTGAG +
Preference number: 4 (lower is better)
Translates to: EAGSAQGMKSGRWAPQAPATSGL*VCGSGE
Trigger: CTCACCAGAGCCACAGACTCACAGCCCAGAGGTGGC...GGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
CDS-3UTR TCA 90 bp GGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGCAATCAGGAGTGTGGGTaGTGCTGGGCCACAGCCCCG +
Preference number: 4 (lower is better)
Translates to: GAKWSPAVAEAAALGLVGNQECG*CWATAP
Trigger: CGGGGCTGTGGCCCAGCATCACCCACACTCCTGATT...GCCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402415.8
CDS-3UTR GCA 90 bp GAGGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCGTGGCCTGCTCCACCTaGACCTCTGTGGAGCTGGTG +
Preference number: 4 (lower is better)
Translates to: EAGSAQGMKSGRWAPQAPVACST*TSVELV
Trigger: CACCAGCTCCACAGAGGTGCAGGTGGAGCAGGCCAC...GGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR GCA 90 bp GGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCAGAGATGGGCGTGGCCTaGTCCACCTGCACCTCTGTG +
Preference number: 4 (lower is better)
Translates to: GRLGPRHEEWTLGSSGSPEMGVA*STCTSV
Trigger: CACAGAGGTGCAGGTGGAGCAGGCCACGCCCATCTC...TGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR GCA 90 bp CCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCGAGATGGGCGTGGCCTaGTCCACCTGCACCTCTGTG +
Preference number: 4 (lower is better)
Translates to: PTGRTGDPLGSERSQVEPEMGVA*STCTSV
Trigger: CACAGAGGTGCAGGTGGAGCAGGCCACGCCCATCTC...GGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR GCA 90 bp GTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTCACGGCGGCCCGGTCAAGCCTGGTaGGGGATGAGTGGCCCTGGT +
Preference number: 4 (lower is better)
Translates to: VWPLLRIKDRCYLQGSRRPGQAW*GMSGPG
Trigger: ACCAGGGCCACTCATCCCGCACCAGGCTTGACCGGG...CCGCCGTGACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp AGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTTGTCCCGCACCGTGTaGCGCTTCACCTGGGCCCGC +
Preference number: 4 (lower is better)
Translates to: SERSQVEPSSGRSSRAGTLSRTV*RFTWAR
Trigger: GCGGGCCCAGGTGAAGCGGCACACGGTGCGGGACAA...AGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp TGGGCAGGGTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTTTGTCCCGCACCGTGTaGCGCTTCACCTGGGCCCGC +
Preference number: 4 (lower is better)
Translates to: WAGSGPCCGSKTGAICRGLSRTV*RFTWAR
Trigger: GCGGGCCCAGGTGAAGCGGCACACGGTGCGGGACAA...ACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGACCCTGCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GAGGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCATGTCGGGAATGCTGTaGTGGGGCTCGTCCGCCAGG +
Preference number: 4 (lower is better)
Translates to: EAGSAQGMKSGRWAPQAPMSGML*WGSSAR
Trigger: CCTGGCGGACGAGCCCCAGCACAGCATTCCCGACAT...GGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp AGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGCTGCACTGTCCAGCCTaGCGAGCCGAAGCCCCGCTT +
Preference number: 4 (lower is better)
Translates to: RSQVEPSSGRSSRAGTCGLHCPA*RAEAPL
Trigger: AAGCGGGGCTTCGGCTCGGCAGGCTGGACAGTGCAG...CCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GAGGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCAGCTCCACCTTGGCCTaGACTGTCCAGCCTGCCGAG +
Preference number: 4 (lower is better)
Translates to: EAGSAQGMKSGRWAPQAPSSTLA*TVQPAE
Trigger: CTCGGCAGGCTGGACAGTGCAGGCCAAGGTGGAGCT...GGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTCACGGCGGCGGCGGCAAAGAGGCTaGGGGCCTGGTACATGTGCG +
Preference number: 4 (lower is better)
Translates to: VWPLLRIKDRCYLQGSRRRRQRG*GPGTCA
Trigger: CGCACATGTACCAGGCCCGCAGCCTCTTTGCCGCCG...CCGCCGTGACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCAGGTCTGAGAGTCCGCTaGTGTCGGCGGCAAAGAGGC +
Preference number: 4 (lower is better)
Translates to: GRLGPRHEEWTLGSSGSPGLRVR*CRRQRG
Trigger: GCCTCTTTGCCGCCGACAGCAGCGGACTCTCAGACC...TGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCACCTGCTGGTCCAATCTaGAGCAGCTCGAAGGCCGCC +
Preference number: 4 (lower is better)
Translates to: GRLGPRHEEWTLGSSGSPPAGPI*SSSKAA
Trigger: GGCGGCCTTCGAGCTGCTGCAGATTGGACCAGCAGG...TGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGCCTGCACCCCCTTCCCTaGACACTCGATGTCCACCCG +
Preference number: 4 (lower is better)
Translates to: GAKWSPAVAEAAALGLVGLHPLP*TLDVHP
Trigger: CGGGTGGACATCGAGTGTGCAGGGAAGGGGGTGCAG...GCCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTCACGGCGGAGGAGGAGCCCCCATTaGACAGCACACGGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: VWPLLRIKDRCYLQGSRRRRSPH*TAHGSA
Trigger: GGCGCTGCCGTGTGCTGTGCAATGGGGGCTCCTCCT...CCGCCGTGACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GAGGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCTTGATGTCAGCAGGGTaGAGGTCCGTGGCCCGGACC +
Preference number: 4 (lower is better)
Translates to: EAGSAQGMKSGRWAPQAPLMSAG*RSVART
Trigger: GGTCCGGGCCACGGACCTGCACCCTGCTGACATCAA...GGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGCTTGATGTCAGCAGGGTaGAGGTCCGTGGCCCGGACC +
Preference number: 4 (lower is better)
Translates to: GAKWSPAVAEAAALGLVGLMSAG*RSVART
Trigger: GGTCCGGGCCACGGACCTGCACCCTGCTGACATCAA...GCCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GGGCAGCACTTGACGGGCCAGCTCCCAGCTGCAGCTGAAAGGGCTGGAAGGGCAAGTAGGTCTGGGCGATaGCGCAGGTGGCGCGGTGCT +
Preference number: 4 (lower is better)
Translates to: GQHLTGQLPAAAERAGRASRSGR*RRWRGA
Trigger: AGCACCGCGCCACCTGCGGCATCGCCCAGACCTACT...TGCCCTTCCAGCCCTTTCAGCTGCAGCTGGGAGCTGGCCCGTCAAGTGCTGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GGGCAGCACTTGACGGGCCAGCTCCCAGCTGCAGCTGAAAGGGCTGGAAGGGCAGGGGGCCGTCCACTTTaGCGTCTTTGCAGAGGCGGG +
Preference number: 4 (lower is better)
Translates to: GQHLTGQLPAAAERAGRAGGRPL*RLCRGG
Trigger: CCCGCCTCTGCAAAGACGGCAAAGTGGACGGCCCCC...TGCCCTTCCAGCCCTTTCAGCTGCAGCTGGGAGCTGGCCCGTCAAGTGCTGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp TCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCAGGGGAGAGGGGGCCGTCCACTTTaGCGTCTTTGCAGAGGCGGG +
Preference number: 4 (lower is better)
Translates to: SAQGMKSGRWAPQAPQGRGGRPL*RLCRGG
Trigger: CCCGCCTCTGCAAAGACGGCAAAGTGGACGGCCCCC...TCTCCCCTGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTCACGGCGGGGGATGTCCTCCCAGTaGCTCAGGGCCAACAGCGCC +
Preference number: 4 (lower is better)
Translates to: VWPLLRIKDRCYLQGSRRGMSSQ*LRANSA
Trigger: GGCGCTGTTGGCCCTGAGGCACTGGGAGGACATCCC...CCGCCGTGACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp AGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGGGCCTCGTCTCCACATaGTCTGGCACCAGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: RSQVEPSSGRSSRAGTCGGLVST*SGTRRQ
Trigger: CTGCCGCCTGGTGCCAGAGCATGTGGAGACGAGGCC...CCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp CAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAATCCGCATCCCAGATCTaGAGGGTGAGCCGCGCGGGG +
Preference number: 4 (lower is better)
Translates to: QATPWEVRGAKWSPAVAESASQI*RVSRAG
Trigger: CCCCGCGCGGCTCACCCTGCAGATCTGGGATGCGGA...TTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp TCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCAGGGGAGAGGGGGTCAGGTTCATTaGGGGCCAGGCCCACTGGGT +
Preference number: 4 (lower is better)
Translates to: SAQGMKSGRWAPQAPQGRGGQVH*GPGPLG
Trigger: ACCCAGTGGGCCTGGCCCGCAATGAACCTGACCCCC...TCTCCCCTGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp CCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCGGGTCTGGCCCCTGCTaGGGATCAAAGACCGGTGCT +
Preference number: 4 (lower is better)
Translates to: PTGRTGDPLGSERSQVEPGSGPC*GSKTGA
Trigger: AGCACCGGTCTTTGATCCGCAGCAGGGGCCAGACCC...GGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GAGGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCGGGTCTGGCCCCTGCTaGGGATCAAAGACCGGTGCT +
Preference number: 4 (lower is better)
Translates to: EAGSAQGMKSGRWAPQAPGSGPC*GSKTGA
Trigger: AGCACCGGTCTTTGATCCGCAGCAGGGGCCAGACCC...GGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GAGGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCGAAGGAGCTAGCCGGTaGAGCACGGCTCACACGCCT +
Preference number: 4 (lower is better)
Translates to: EAGSAQGMKSGRWAPQAPEGASR*STAHTP
Trigger: AGGCGTGTGAGCCGTGCTCCACCGGCTAGCTCCTTC...GGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CCA 90 bp GGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGCCACAGCTCTCCGAGATaGGCGTGGCCTGCTCCACCT +
Preference number: 4 (lower is better)
Translates to: GAKWSPAVAEAAALGLVGHSSPR*AWPAPP
Trigger: AGGTGGAGCAGGCCACGCCCATCTCGGAGAGCTGTG...GCCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CCA 90 bp CCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCCGGGATGAGTGGCCCTaGTCCTTGTCAGCGAGGGAG +
Preference number: 4 (lower is better)
Translates to: PTGRTGDPLGSERSQVEPRDEWP*SLSARE
Trigger: CTCCCTCGCTGACAAGGACCAGGGCCACTCATCCCG...GGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCACGGGATGAGTGGCCCTaGTCCTTGTCAGCGAGGGAG +
Preference number: 4 (lower is better)
Translates to: GRLGPRHEEWTLGSSGSPRDEWP*SLSARE
Trigger: CTCCCTCGCTGACAAGGACCAGGGCCACTCATCCCG...TGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGCCTGGTGCGGGATGAGTaGCCCTGGTCCTTGTCAGCG +
Preference number: 4 (lower is better)
Translates to: GAKWSPAVAEAAALGLVGLVRDE*PWSLSA
Trigger: CGCTGACAAGGACCAGGGCCACTCATCCCGCACCAG...GCCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp TGGGCAGGGTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTGTGTGCCGCTTCACCTaGGCCCGCAGCATCCTGGCC +
Preference number: 4 (lower is better)
Translates to: WAGSGPCCGSKTGAICRGVCRFT*ARSILA
Trigger: GGCCAGGATGCTGCGGGCCCAGGTGAAGCGGCACAC...ACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGACCCTGCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGTGTGCCGCTTCACCTaGGCCCGCAGCATCCTGGCC +
Preference number: 4 (lower is better)
Translates to: ERSQVEPSSGRSSRAGTCVCRFT*ARSILA
Trigger: GGCCAGGATGCTGCGGGCCCAGGTGAAGCGGCACAC...ACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp CCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCTCGGGAATGCTGTGCTaGGGCTCGTCCGCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: PTGRTGDPLGSERSQVEPSGMLC*GSSARK
Trigger: CTTCCTGGCGGACGAGCCCCAGCACAGCATTCCCGA...GGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTCACGGCGGGCTGCCTTGACCTCCTaGAAGCCACAGGGCAGGCCG +
Preference number: 4 (lower is better)
Translates to: VWPLLRIKDRCYLQGSRRAALTS*KPQGRP
Trigger: CGGCCTGCCCTGTGGCTTCCAGGAGGTCAAGGCAGC...CCGCCGTGACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GGGCAGCACTTGACGGGCCAGCTCCCAGCTGCAGCTGAAAGGGCTGGAAGGGCAGACCAGGCTGACGGGTaGGAAGGCATGCAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: GQHLTGQLPAAAERAGRADQADG*EGMQAQ
Trigger: CTGGGCCTGCATGCCTTCCCACCCGTCAGCCTGGTC...TGCCCTTCCAGCCCTTTCAGCTGCAGCTGGGAGCTGGCCCGTCAAGTGCTGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp TCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCAGGGGAGAGACCAGGCTGACGGGTaGGAAGGCATGCAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: SAQGMKSGRWAPQAPQGRDQADG*EGMQAQ
Trigger: CTGGGCCTGCATGCCTTCCCACCCGTCAGCCTGGTC...TCTCCCCTGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCAAAGAGGCTGCGGGCCTaGTACATGTGCGCTCGGAGC +
Preference number: 4 (lower is better)
Translates to: GRLGPRHEEWTLGSSGSPKRLRA*YMCARS
Trigger: GCTCCGAGCGCACATGTACCAGGCCCGCAGCCTCTT...TGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGCAAGAGGCTGCGGGCCTaGTACATGTGCGCTCGGAGC +
Preference number: 4 (lower is better)
Translates to: GAKWSPAVAEAAALGLVGKRLRA*YMCARS
Trigger: GCTCCGAGCGCACATGTACCAGGCCCGCAGCCTCTT...GCCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp AGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGCGTGGCCGGTCCACCTaGGCCAGGTTCACCCGCTTT +
Preference number: 4 (lower is better)
Translates to: RSQVEPSSGRSSRAGTCGRGRST*ARFTRF
Trigger: AAAGCGGGTGAACCTGGCCCAGGTGGACCGGCCACG...CCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGCCAGGGTGCAGGTCCGTaGCCCGGACCACATAGACTC +
Preference number: 4 (lower is better)
Translates to: GAKWSPAVAEAAALGLVGQGAGP*PGPHRL
Trigger: GAGTCTATGTGGTCCGGGCCACGGACCTGCACCCTG...GCCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp CCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCAGGCGGGTCAGGATCTaGCTGGGCTTCATGGGGTCC +
Preference number: 4 (lower is better)
Translates to: PTGRTGDPLGSERSQVEPRRVRI*LGFMGS
Trigger: GGACCCCATGAAGCCCAGCCAGATCCTGACCCGCCT...GGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp CCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCCCATGGTGCACTGCTTaGCTGTCTTTGCGCCCCGCG +
Preference number: 4 (lower is better)
Translates to: PTGRTGDPLGSERSQVEPPWCTA*LSLRPA
Trigger: CGCGGGGCGCAAAGACAGCCAAGCAGTGCACCATGG...GGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp CAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAACGGCCAGGAGGCCACTaGGCTCAGGCCCCGAGGATT +
Preference number: 4 (lower is better)
Translates to: QATPWEVRGAKWSPAVAERPGGH*AQAPRI
Trigger: AATCCTCGGGGCCTGAGCCCAGTGGCCTCCTGGCCG...TTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
CDS-3UTR CCA 90 bp TGGAAACCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGGGCAAGCCGCAGCCTaGGGCAGTGAGGACAGGCGG +
Preference number: 4 (lower is better)
Translates to: WKPTGRTGDPLGSERSQVGQAAA*GSEDRR
Trigger: CCGCCTGTCCTCACTGCCCCAGGCTGCGGCTTGCCC...CACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGGTTTCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTCACGGCGGAGTGGAGCCCAGCAGTaGCAGAAGCAGCCGCGCTGG +
Preference number: 4 (lower is better)
Translates to: VWPLLRIKDRCYLQGSRRSGAQQ*QKQPRW
Trigger: CCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACT...CCGCCGTGACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGCGGACAGGCGACCCCCTaGGAAGTGAGAGGAGCCAAG +
Preference number: 4 (lower is better)
Translates to: GAKWSPAVAEAAALGLVGGQATP*EVRGAK
Trigger: CTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCC...GCCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTCACGGCGGTCACAGCTCCTCAGCTaGGCCTGGAGGCGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: VWPLLRIKDRCYLQGSRRSQLLS*AWRRWL
Trigger: CAGCCAGCGCCTCCAGGCCCAGCTGAGGAGCTGTGA...CCGCCGTGACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp GGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGCTGGGGCTCCTCCTTGTaGGACCGGTTTTTGCCGAGC +
Preference number: 4 (lower is better)
Translates to: GAKWSPAVAEAAALGLVGWGSSL*DRFLPS
Trigger: GCTCGGCAAAAACCGGTCTCACAAGGAGGAGCCCCA...GCCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR TCA 90 bp GGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGCCGATGGCCACGTCGTTaGCCTTGTCCGAGTCTCGGA +
Preference number: 4 (lower is better)
Translates to: GAKWSPAVAEAAALGLVGRWPRR*PCPSLG
Trigger: TCCGAGACTCGGACAAGGTCAACGACGTGGCCATCG...GCCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR TCA 90 bp GAGGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCTCTCCGGTCGATCATTaGGGCCTCCAGGAAGGCTCC +
Preference number: 4 (lower is better)
Translates to: EAGSAQGMKSGRWAPQAPSPVDH*GLQEGS
Trigger: GGAGCCTTCCTGGAGGCCTCAATGATCGACCGGAGA...GGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR TCA 90 bp CAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAACCCTCATGCAGGACTTaGGGCGCTCCCGGTCAAGCC +
Preference number: 4 (lower is better)
Translates to: QATPWEVRGAKWSPAVAEPSCRT*GAPGQA
Trigger: GGCTTGACCGGGAGCGCCTCAAGTCCTGCATGAGGG...TTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp GGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCACCTTGCGCTGTTTGCTaGGGCCCAGCCACAGGTACA +
Preference number: 4 (lower is better)
Translates to: GRLGPRHEEWTLGSSGSPPCAVC*GPATGT
Trigger: TGTACCTGTGGCTGGGCCTCAGCAAACAGCGCAAGG...TGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp AGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTCCATGGGCACGGGCATaGTGGGACCTCGGTCCACGT +
Preference number: 4 (lower is better)
Translates to: SERSQVEPSSGRSSRAGTPWARA*WDLGPR
Trigger: ACGTGGACCGAGGTCCCATCATGCCCGTGCCCATGG...AGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp CCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCCTCCTTGCCCTTCATTaGCCCCTTCAGGCCCTCGGT +
Preference number: 4 (lower is better)
Translates to: PTGRTGDPLGSERSQVEPLLALH*PLQALG
Trigger: ACCGAGGGCCTGAAGGGGTCAATGAAGGGCAAGGAG...GGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp AGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGCGCAGAGGGAGCCCTTaGAGCGTCCCACAATGCGCT +
Preference number: 4 (lower is better)
Translates to: RSQVEPSSGRSSRAGTCGRRGSP*SVPQCA
Trigger: AGCGCATTGTGGGACGCTTCAAGGGCTCCCTCTGCG...CCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp GGGCAGCACTTGACGGGCCAGCTCCCAGCTGCAGCTGAAAGGGCTGGAAGGGCACGCAGAGGGAGCCCTTaGAGCGTCCCACAATGCGCT +
Preference number: 4 (lower is better)
Translates to: GQHLTGQLPAAAERAGRARRGSP*SVPQCA
Trigger: AGCGCATTGTGGGACGCTTCAAGGGCTCCCTCTGCG...TGCCCTTCCAGCCCTTTCAGCTGCAGCTGGGAGCTGGCCCGTCAAGTGCTGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp TCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCAGGGGAGATCTCAGAGGGCCCAGTaGAGACGCGGTTGGCCACCT +
Preference number: 4 (lower is better)
Translates to: SAQGMKSGRWAPQAPQGRSQRAQ*RRGWPP
Trigger: AGGTGGCCAACCGCGTCTTCACTGGGCCCTCTGAGA...TCTCCCCTGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp GTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTCACGGCGGTCTCAGAGGGCCCAGTaGAGACGCGGTTGGCCACCT +
Preference number: 4 (lower is better)
Translates to: VWPLLRIKDRCYLQGSRRSQRAQ*RRGWPP
Trigger: AGGTGGCCAACCGCGTCTTCACTGGGCCCTCTGAGA...CCGCCGTGACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp GTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTCACGGCGGCTTGGGCTTCCGAGGTaGGATGTCCAGAGGCGTCCC +
Preference number: 4 (lower is better)
Translates to: VWPLLRIKDRCYLQGSRRLGLPR*DVQRRP
Trigger: GGGACGCCTCTGGACATCTCACCTCGGAAGCCCAAG...CCGCCGTGACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp TGGGCAGGGTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTCCCAGATCTGCAGGGTaGGCCGCGCGGGGATCTTGT +
Preference number: 4 (lower is better)
Translates to: WAGSGPCCGSKTGAICRGPRSAG*AARGSC
Trigger: ACAAGATCCCCGCGCGGCTCACCCTGCAGATCTGGG...ACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGACCCTGCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp AGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTGCTCGGCCCAAGGCATaGAGAGTGGACGCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: SERSQVEPSSGRSSRAGTARPKA*RVDAGL
Trigger: GAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGC...AGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp AGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGAGTCTGTGGCTCTGGTaGGCTCACAGGGCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: RSQVEPSSGRSSRAGTCGSLWLW*AHRAWA
Trigger: TGCCCAGGCCCTGTGAGCTCACCAGAGCCACAGACT...CCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
CDS-3UTR GCA 90 bp AGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGCCCAGGAGCCCACTGTaGCGTCAGTGGCCTGATACC +
Preference number: 4 (lower is better)
Translates to: RSQVEPSSGRSSRAGTCGPRSPL*RQWPDT
Trigger: GGTATCAGGCCACTGACGGCACAGTGGGCTCCTGGG...CCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR GCA 90 bp GTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTCACGGCGGTTCAAGCCCACCAGCTaGCGGGCCTCGATCACCGTG +
Preference number: 4 (lower is better)
Translates to: VWPLLRIKDRCYLQGSRRFKPTS*RASITV
Trigger: CACGGTGATCGAGGCCCGGCAGCTGGTGGGCTTGAA...CCGCCGTGACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR GCA 90 bp TCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCAGGGGAGATTCAAGCCCACCAGCTaGCGGGCCTCGATCACCGTG +
Preference number: 4 (lower is better)
Translates to: SAQGMKSGRWAPQAPQGRFKPTS*RASITV
Trigger: CACGGTGATCGAGGCCCGGCAGCTGGTGGGCTTGAA...TCTCCCCTGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR GCA 90 bp GGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCACCACCAGGGTGCCACTaGGCAGCAGGTTCTTGGAGT +
Preference number: 4 (lower is better)
Translates to: GRLGPRHEEWTLGSSGSPPPGCH*AAGSWS
Trigger: ACTCCAAGAACCTGCTGCGCAGTGGCACCCTGGTGG...TGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR GCA 90 bp AGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGAGGAGCCCACCAGGGTaGCACTGCGCAGCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: RSQVEPSSGRSSRAGTCGRSPPG*HCAAGS
Trigger: AGAACCTGCTGCGCAGTGGCACCCTGGTGGGCTCCT...CCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR GCA 90 bp GAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTCCCGGTCAAGCCTGGTaGGGGATGAGTGGCCCTGGT +
Preference number: 4 (lower is better)
Translates to: ERSQVEPSSGRSSRAGTCPGQAW*GMSGPG
Trigger: ACCAGGGCCACTCATCCCGCACCAGGCTTGACCGGG...ACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGCCGCAGCATCCTGGCCTaGTGCCCCATGTTTTCCAGC +
Preference number: 4 (lower is better)
Translates to: GAKWSPAVAEAAALGLVGRSILA*CPMFSS
Trigger: GCTGGAAAACATGGGGCAGCAGGCCAGGATGCTGCG...GCCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTCACGGCGGATGTCGGGAATGCTGTaGTGGGGCTCGTCCGCCAGG +
Preference number: 4 (lower is better)
Translates to: VWPLLRIKDRCYLQGSRRMSGML*WGSSAR
Trigger: CCTGGCGGACGAGCCCCAGCACAGCATTCCCGACAT...CCGCCGTGACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCACCTTGGCGCAGTCCTTaGCAGTCTCCTCCTCCACGA +
Preference number: 4 (lower is better)
Translates to: GRLGPRHEEWTLGSSGSPPWRSP*QSPPPR
Trigger: TCGTGGAGGAGGAGACTGGCAAGGACTGCGCCAAGG...TGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp CAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAACTGCACTGTCCAGCCTaGCGAGCCGAAGCCCCGCTT +
Preference number: 4 (lower is better)
Translates to: QATPWEVRGAKWSPAVAELHCPA*RAEAPL
Trigger: AAGCGGGGCTTCGGCTCGGCAGGCTGGACAGTGCAG...TTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTCACGGCGGAGCTCCACCTTGGCCTaGACTGTCCAGCCTGCCGAG +
Preference number: 4 (lower is better)
Translates to: VWPLLRIKDRCYLQGSRRSSTLA*TVQPAE
Trigger: CTCGGCAGGCTGGACAGTGCAGGCCAAGGTGGAGCT...CCGCCGTGACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp AGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGCCTGCTGGTCCAATCTaGAGCAGCTCGAAGGCCGCC +
Preference number: 4 (lower is better)
Translates to: RSQVEPSSGRSSRAGTCGPAGPI*SSSKAA
Trigger: GGCGGCCTTCGAGCTGCTGCAGATTGGACCAGCAGG...CCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp TCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCAGGGGAGACCTGCTGGTCCAATCTaGAGCAGCTCGAAGGCCGCC +
Preference number: 4 (lower is better)
Translates to: SAQGMKSGRWAPQAPQGRPAGPI*SSSKAA
Trigger: GGCGGCCTTCGAGCTGCTGCAGATTGGACCAGCAGG...TCTCCCCTGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTCACGGCGGCTGCACCCCCTTCCCTaGACACTCGATGTCCACCCG +
Preference number: 4 (lower is better)
Translates to: VWPLLRIKDRCYLQGSRRLHPLP*TLDVHP
Trigger: CGGGTGGACATCGAGTGTGCAGGGAAGGGGGTGCAG...CCGCCGTGACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp CAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAAGTAGGTCTGGGCGATaGCGCAGGTGGCGCGGTGCT +
Preference number: 4 (lower is better)
Translates to: QATPWEVRGAKWSPAVAESRSGR*RRWRGA
Trigger: AGCACCGCGCCACCTGCGGCATCGCCCAGACCTACT...TTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp CAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGGGGGCCGTCCACTTTaGCGTCTTTGCAGAGGCGGG +
Preference number: 4 (lower is better)
Translates to: QATPWEVRGAKWSPAVAEGGRPL*RLCRGG
Trigger: CCCGCCTCTGCAAAGACGGCAAAGTGGACGGCCCCC...TTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp TGGGCAGGGTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTGGGATGTCCTCCCAGTaGCTCAGGGCCAACAGCGCC +
Preference number: 4 (lower is better)
Translates to: WAGSGPCCGSKTGAICRGGMSSQ*LRANSA
Trigger: GGCGCTGTTGGCCCTGAGGCACTGGGAGGACATCCC...ACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGACCCTGCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp CAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGGGATGTCCTCCCAGTaGCTCAGGGCCAACAGCGCC +
Preference number: 4 (lower is better)
Translates to: QATPWEVRGAKWSPAVAEGMSSQ*LRANSA
Trigger: GGCGCTGTTGGCCCTGAGGCACTGGGAGGACATCCC...TTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GGGCAGCACTTGACGGGCCAGCTCCCAGCTGCAGCTGAAAGGGCTGGAAGGGCATCCTGCTTGTCCTCCTaGTGGCCCTTCAGCCACCCC +
Preference number: 4 (lower is better)
Translates to: GQHLTGQLPAAAERAGRASCLSS*WPFSHP
Trigger: GGGGTGGCTGAAGGGCCAGCAGGAGGACAAGCAGGA...TGCCCTTCCAGCCCTTTCAGCTGCAGCTGGGAGCTGGCCCGTCAAGTGCTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp TCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCAGGGGAGATCCTGCTTGTCCTCCTaGTGGCCCTTCAGCCACCCC +
Preference number: 4 (lower is better)
Translates to: SAQGMKSGRWAPQAPQGRSCLSS*WPFSHP
Trigger: GGGGTGGCTGAAGGGCCAGCAGGAGGACAAGCAGGA...TCTCCCCTGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp CCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCTGGACGTCTGTGTCCTaGTTGTCCTCCTGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: PTGRTGDPLGSERSQVEPWTSVS*LSSCWP
Trigger: GGGCCAGCAGGAGGACAAGCAGGACACAGACGTCCA...GGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp TGGAAACCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGTCCGCATCCCAGATCTaGAGGGTGAGCCGCGCGGGG +
Preference number: 4 (lower is better)
Translates to: WKPTGRTGDPLGSERSQVSASQI*RVSRAG
Trigger: CCCCGCGCGGCTCACCCTGCAGATCTGGGATGCGGA...CACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGGTTTCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTCACGGCGGCTGCTTGGCTGTCTTTaGGCCCCGCGGGAACCGGTT +
Preference number: 4 (lower is better)
Translates to: VWPLLRIKDRCYLQGSRRLLGCL*APREPV
Trigger: AACCGGTTCCCGCGGGGCGCAAAGACAGCCAAGCAG...CCGCCGTGACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GGGCAGCACTTGACGGGCCAGCTCCCAGCTGCAGCTGAAAGGGCTGGAAGGGCACTGCTTGGCTGTCTTTaGGCCCCGCGGGAACCGGTT +
Preference number: 4 (lower is better)
Translates to: GQHLTGQLPAAAERAGRALLGCL*APREPV
Trigger: AACCGGTTCCCGCGGGGCGCAAAGACAGCCAAGCAG...TGCCCTTCCAGCCCTTTCAGCTGCAGCTGGGAGCTGGCCCGTCAAGTGCTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp CCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCACTCATCGTTCTCATTaGGGGCCAGGAGGGGCCACC +
Preference number: 4 (lower is better)
Translates to: PTGRTGDPLGSERSQVEPTHRSH*GPGGAT
Trigger: GGTGGCCCCTCCTGGCCCGCAATGAGAACGATGAGT...GGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GAGGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCACTCATCGTTCTCATTaGGGGCCAGGAGGGGCCACC +
Preference number: 4 (lower is better)
Translates to: EAGSAQGMKSGRWAPQAPTHRSH*GPGGAT
Trigger: GGTGGCCCCTCCTGGCCCGCAATGAGAACGATGAGT...GGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp CAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGGGGGTCAGGTTCATTaGGGGCCAGGCCCACTGGGT +
Preference number: 4 (lower is better)
Translates to: QATPWEVRGAKWSPAVAEGGQVH*GPGPLG
Trigger: ACCCAGTGGGCCTGGCCCGCAATGAACCTGACCCCC...TTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCAAAGACCGGTGCTATCTaGAGGGGTCACGGCGGGGAT +
Preference number: 4 (lower is better)
Translates to: GRLGPRHEEWTLGSSGSPKTGAI*RGHGGD
Trigger: ATCCCCGCCGTGACCCCTGCAGATAGCACCGGTCTT...TGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTCACGGCGGGCAGGGTCTGGCCCCTaGTGCGGATCAAAGACCGGT +
Preference number: 4 (lower is better)
Translates to: VWPLLRIKDRCYLQGSRRAGSGP*CGSKTG
Trigger: ACCGGTCTTTGATCCGCAGCAGGGGCCAGACCCTGC...CCGCCGTGACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp AGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGAAGGCCATGCTGGTGTaGGCTGCCTGGCACTGCCAG +
Preference number: 4 (lower is better)
Translates to: RSQVEPSSGRSSRAGTCGKAMLV*AAWHCQ
Trigger: CTGGCAGTGCCAGGCAGCCCACACCAGCATGGCCTT...CCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CCA 90 bp AGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGCACAGCTCTCCGAGATaGGCGTGGCCTGCTCCACCT +
Preference number: 4 (lower is better)
Translates to: RSQVEPSSGRSSRAGTCGHSSPR*AWPAPP
Trigger: AGGTGGAGCAGGCCACGCCCATCTCGGAGAGCTGTG...CCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CCA 90 bp GAGGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCTTCCTGTCGGTGACCTaGGGCCGCATTGGTGGAGTG +
Preference number: 4 (lower is better)
Translates to: EAGSAQGMKSGRWAPQAPFLSVT*GRIGGV
Trigger: CACTCCACCAATGCGGCCCCAGGTCACCGACAGGAA...GGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CCA 90 bp GGGCAGCACTTGACGGGCCAGCTCCCAGCTGCAGCTGAAAGGGCTGGAAGGGCACGGGATGAGTGGCCCTaGTCCTTGTCAGCGAGGGAG +
Preference number: 4 (lower is better)
Translates to: GQHLTGQLPAAAERAGRARDEWP*SLSARE
Trigger: CTCCCTCGCTGACAAGGACCAGGGCCACTCATCCCG...TGCCCTTCCAGCCCTTTCAGCTGCAGCTGGGAGCTGGCCCGTCAAGTGCTGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGCTCCCGGTCAAGCCTaGTGCGGGATGAGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: ERSQVEPSSGRSSRAGTCAPGQA*CGMSGP
Trigger: AGGGCCACTCATCCCGCACCAGGCTTGACCGGGAGC...ACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp AGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGTCGGGAATGCTGTGCTaGGGCTCGTCCGCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: RSQVEPSSGRSSRAGTCGSGMLC*GSSARK
Trigger: CTTCCTGGCGGACGAGCCCCAGCACAGCATTCCCGA...CCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp TCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCAGGGGAGATCGGGAATGCTGTGCTaGGGCTCGTCCGCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: SAQGMKSGRWAPQAPQGRSGMLC*GSSARK
Trigger: CTTCCTGGCGGACGAGCCCCAGCACAGCATTCCCGA...TCTCCCCTGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp CAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCTGCCTTGACCTCCTaGAAGCCACAGGGCAGGCCG +
Preference number: 4 (lower is better)
Translates to: QATPWEVRGAKWSPAVAEAALTS*KPQGRP
Trigger: CGGCCTGCCCTGTGGCTTCCAGGAGGTCAAGGCAGC...TTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTAGGTGGGAAGCGGGGTaGGCAGTACGCCTCGTCTGC +
Preference number: 4 (lower is better)
Translates to: ERSQVEPSSGRSSRAGTCRWEAG*AVRLVC
Trigger: GCAGACGAGGCGTACTGCCCACCCCGCTTCCCACCT...ACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp AGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTCGTGGCCGGTCCACCTaGGCCAGGTTCACCCGCTTT +
Preference number: 4 (lower is better)
Translates to: SERSQVEPSSGRSSRAGTRGRST*ARFTRF
Trigger: AAAGCGGGTGAACCTGGCCCAGGTGGACCGGCCACG...AGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GGGCAGCACTTGACGGGCCAGCTCCCAGCTGCAGCTGAAAGGGCTGGAAGGGCACCACAACCTCCCCTGTaGAGTGAGAGGAGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: GQHLTGQLPAAAERAGRAPQPPL*SERRSP
Trigger: GGGGCTCCTCCTCTCACTCCACAGGGGAGGTTGTGG...TGCCCTTCCAGCCCTTTCAGCTGCAGCTGGGAGCTGGCCCGTCAAGTGCTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp AGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGCAGGGTGCAGGTCCGTaGCCCGGACCACATAGACTC +
Preference number: 4 (lower is better)
Translates to: RSQVEPSSGRSSRAGTCGQGAGP*PGPHRL
Trigger: GAGTCTATGTGGTCCGGGCCACGGACCTGCACCCTG...CCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp TGGGCAGGGTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTGGGCGATGCCGCAGGTaGCGCGGTGCTTGCTGTAGA +
Preference number: 4 (lower is better)
Translates to: WAGSGPCCGSKTGAICRGGRCRR*RGACCR
Trigger: TCTACAGCAAGCACCGCGCCACCTGCGGCATCGCCC...ACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGACCCTGCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp AGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTGGGCGATGCCGCAGGTaGCGCGGTGCTTGCTGTAGA +
Preference number: 4 (lower is better)
Translates to: SERSQVEPSSGRSSRAGTGRCRR*RGACCR
Trigger: TCTACAGCAAGCACCGCGCCACCTGCGGCATCGCCC...AGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp CAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGGGCGATGCCGCAGGTaGCGCGGTGCTTGCTGTAGA +
Preference number: 4 (lower is better)
Translates to: QATPWEVRGAKWSPAVAEGRCRR*RGACCR
Trigger: TCTACAGCAAGCACCGCGCCACCTGCGGCATCGCCC...TTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp TCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCAGGGGAGAAGGCGGGTCAGGATCTaGCTGGGCTTCATGGGGTCC +
Preference number: 4 (lower is better)
Translates to: SAQGMKSGRWAPQAPQGRRRVRI*LGFMGS
Trigger: GGACCCCATGAAGCCCAGCCAGATCCTGACCCGCCT...TCTCCCCTGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp TGGAAACCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGCCAGGGGGCCCAAAGTaGGGGCCGTCCACTTTGCCG +
Preference number: 4 (lower is better)
Translates to: WKPTGRTGDPLGSERSQVPGGPK*GPSTLP
Trigger: CGGCAAAGTGGACGGCCCCCACTTTGGGCCCCCTGG...CACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGGTTTCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp AGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTCGTCTCCACATGCTCTaGCACCAGGCGGCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: SERSQVEPSSGRSSRAGTRLHML*HQAAAC
Trigger: GCAGGCTGCCGCCTGGTGCCAGAGCATGTGGAGACG...AGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTCGTCTCCACATGCTCTaGCACCAGGCGGCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: ERSQVEPSSGRSSRAGTCRLHML*HQAAAC
Trigger: GCAGGCTGCCGCCTGGTGCCAGAGCATGTGGAGACG...ACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GGGCAGCACTTGACGGGCCAGCTCCCAGCTGCAGCTGAAAGGGCTGGAAGGGCATGCTTGTCCTCCTGCTaGCCCTTCAGCCACCCCCTC +
Preference number: 4 (lower is better)
Translates to: GQHLTGQLPAAAERAGRACLSSC*PFSHPL
Trigger: GAGGGGGTGGCTGAAGGGCCAGCAGGAGGACAAGCA...TGCCCTTCCAGCCCTTTCAGCTGCAGCTGGGAGCTGGCCCGTCAAGTGCTGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCATCAGGTCCAGCTCGATaGCCCCCAGGAAGTCGTCAG +
Preference number: 4 (lower is better)
Translates to: GRLGPRHEEWTLGSSGSPSGPAR*PPGSRQ
Trigger: CTGACGACTTCCTGGGGGCCATCGAGCTGGACCTGA...TGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp TCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCAGGGGAGACCATGGTGCACTGCTTaGCTGTCTTTGCGCCCCGCG +
Preference number: 4 (lower is better)
Translates to: SAQGMKSGRWAPQAPQGRPWCTA*LSLRPA
Trigger: CGCGGGGCGCAAAGACAGCCAAGCAGTGCACCATGG...TCTCCCCTGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGCTCGTGTCGGGCCGGTTaGGTTTCTCTAGGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: GAKWSPAVAEAAALGLVGSCRAG*VSLGGQ
Trigger: CTGACCCCCTAGAGAAACCCAACCGGCCCGACACGA...GCCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
CDS-3UTR CCA 90 bp GGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCATCGTGTCGGGCCGGTTaGGTTTCTCTAGGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: GRLGPRHEEWTLGSSGSPSCRAG*VSLGGQ
Trigger: CTGACCCCCTAGAGAAACCCAACCGGCCCGACACGA...TGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
CDS-3UTR CCA 90 bp TGGAAACCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGCGGCCAGGAGGCCACTaGGCTCAGGCCCCGAGGATT +
Preference number: 4 (lower is better)
Translates to: WKPTGRTGDPLGSERSQVRPGGH*AQAPRI
Trigger: AATCCTCGGGGCCTGAGCCCAGTGGCCTCCTGGCCG...CACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGGTTTCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
CDS-3UTR CCA 90 bp GGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCACCAAGGCATGAAGAGTaGACGCTGGGCTCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: GRLGPRHEEWTLGSSGSPPRHEE*TLGSSG
Trigger: GCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGG...TGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GAGGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCCAAGGCATGAAGAGTaGACGCTGGGCTCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: EAGSAQGMKSGRWAPQAPPRHEE*TLGSSG
Trigger: GCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGG...GGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp AGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGCAGAAGCAGCCGCGCTaGGACTTGTGGGCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: RSQVEPSSGRSSRAGTCGQKQPR*DLWAGS
Trigger: AGACCCTGCCCACAAGTCCCAGCGCGGCTGCTTCTG...CCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp TGGGCAGGGTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTAGTGGAGCCCAGCAGTaGCAGAAGCAGCCGCGCTGG +
Preference number: 4 (lower is better)
Translates to: WAGSGPCCGSKTGAICRGSGAQQ*QKQPRW
Trigger: CCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACT...ACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGACCCTGCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTCACGGCGGGGACAGGCGACCCCCTaGGAAGTGAGAGGAGCCAAG +
Preference number: 4 (lower is better)
Translates to: VWPLLRIKDRCYLQGSRRGQATP*EVRGAK
Trigger: CTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCC...CCGCCGTGACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp TGGGCAGGGTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTTCACAGCTCCTCAGCTaGGCCTGGAGGCGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: WAGSGPCCGSKTGAICRGSQLLS*AWRRWL
Trigger: CAGCCAGCGCCTCCAGGCCCAGCTGAGGAGCTGTGA...ACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGACCCTGCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp CAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAAGGGTGTGCCCGGGATaGGGAGTCCCCTCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: QATPWEVRGAKWSPAVAERVCPG*GVPSAA
Trigger: AGCAGCAGAGGGGACTCCCCATCCCGGGCACACCCT...TTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp AGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTAGGGTGTGCCCGGGATaGGGAGTCCCCTCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: SERSQVEPSSGRSSRAGTRVCPG*GVPSAA
Trigger: AGCAGCAGAGGGGACTCCCCATCCCGGGCACACCCT...AGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp TCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCAGGGGAGACCGTGTCGGGCCGGTTaGGTTTCTCTAGGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: SAQGMKSGRWAPQAPQGRPCRAG*VSLGGQ
Trigger: CTGACCCCCTAGAGAAACCCAACCGGCCCGACACGG...TCTCCCCTGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339598.8
ENST00000403946.7
CDS-3UTR TCA 90 bp GGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGCGCTGCTCTTCTGCACTaGAGTCTTGCCCTTCTGGCC +
Preference number: 4 (lower is better)
Translates to: GAKWSPAVAEAAALGLVGAALLH*SLALLA
Trigger: GGCCAGAAGGGCAAGACTTCAGTGCAGAAGAGCAGC...GCCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR TCA 90 bp TCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCAGGGGAGACGATGGCCACGTCGTTaGCCTTGTCCGAGTCTCGGA +
Preference number: 4 (lower is better)
Translates to: SAQGMKSGRWAPQAPQGRRWPRR*PCPSLG
Trigger: TCCGAGACTCGGACAAGGTCAACGACGTGGCCATCG...TCTCCCCTGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR TCA 90 bp CCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCCCGGCCACCAGCTCTTaGTGTAGATGCAGGGCTTTC +
Preference number: 4 (lower is better)
Translates to: PTGRTGDPLGSERSQVEPPATSS*CRCRAF
Trigger: GAAAGCCCTGCATCTACATCAAGAGCTGGTGGCCGG...GGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR TCA 90 bp GGGCAGCACTTGACGGGCCAGCTCCCAGCTGCAGCTGAAAGGGCTGGAAGGGCATGGTGTAGACCAGGCTaGCGGGTGGGAAGGCATGCA +
Preference number: 4 (lower is better)
Translates to: GQHLTGQLPAAAERAGRAWCRPG*RVGRHA
Trigger: TGCATGCCTTCCCACCCGTCAGCCTGGTCTACACCA...TGCCCTTCCAGCCCTTTCAGCTGCAGCTGGGAGCTGGCCCGTCAAGTGCTGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp TCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCAGGGGAGATGGTGTAGACCAGGCTaGCGGGTGGGAAGGCATGCA +
Preference number: 4 (lower is better)
Translates to: SAQGMKSGRWAPQAPQGRWCRPG*RVGRHA
Trigger: TGCATGCCTTCCCACCCGTCAGCCTGGTCTACACCA...TCTCCCCTGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp GTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTCACGGCGGCGAAGGTCCGGCCCATaGAGTCAGCTTTGCCCATGG +
Preference number: 4 (lower is better)
Translates to: VWPLLRIKDRCYLQGSRRRRSGP*SQLCPW
Trigger: CCATGGGCAAAGCTGACTTCATGGGCCGGACCTTCG...CCGCCGTGACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp GGGCAGCACTTGACGGGCCAGCTCCCAGCTGCAGCTGAAAGGGCTGGAAGGGCACGAAGGTCCGGCCCATaGAGTCAGCTTTGCCCATGG +
Preference number: 4 (lower is better)
Translates to: GQHLTGQLPAAAERAGRARRSGP*SQLCPW
Trigger: CCATGGGCAAAGCTGACTTCATGGGCCGGACCTTCG...TGCCCTTCCAGCCCTTTCAGCTGCAGCTGGGAGCTGGCCCGTCAAGTGCTGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp GAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTCGCAGAGGGAGCCCTTaGAGCGTCCCACAATGCGCT +
Preference number: 4 (lower is better)
Translates to: ERSQVEPSSGRSSRAGTCRRGSP*SVPQCA
Trigger: AGCGCATTGTGGGACGCTTCAAGGGCTCCCTCTGCG...ACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp GGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGCCTCGGACCAGCACATTaGTGGGGTCATTGCTCGGGA +
Preference number: 4 (lower is better)
Translates to: GAKWSPAVAEAAALGLVGLGPAH*WGHCSG
Trigger: TCCCGAGCAATGACCCCATCAATGTGCTGGTCCGAG...GCCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp CCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCGGTCAGCTTTGCCGTTaGTGTCAGCAGGGTGCAGGT +
Preference number: 4 (lower is better)
Translates to: PTGRTGDPLGSERSQVEPGQLCR*CQQGAG
Trigger: ACCTGCACCCTGCTGACATCAACGGCAAAGCTGACC...GGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp CAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAACTTGGGCTTCCGAGGTaGGATGTCCAGAGGCGTCCC +
Preference number: 4 (lower is better)
Translates to: QATPWEVRGAKWSPAVAELGLPR*DVQRRP
Trigger: GGGACGCCTCTGGACATCTCACCTCGGAAGCCCAAG...TTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp AGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTGGAAGAGCCCCAACATaGGCAGCCCCAACAGCGCCA +
Preference number: 4 (lower is better)
Translates to: SERSQVEPSSGRSSRAGTGRAPT*AAPTAP
Trigger: TGGCGCTGTTGGGGCTGCTCATGTTGGGGCTCTTCC...AGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp GGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGCCCCCAAGGAGCTTTTTaGCCATGTAGCCAGGGAGGC +
Preference number: 4 (lower is better)
Translates to: GAKWSPAVAEAAALGLVGPQGAF*PCSQGG
Trigger: GCCTCCCTGGCTACATGGTCAAAAAGCTCCTTGGGG...GCCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp TGGAAACCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGCGACCCCCTGGGAAGTaGGAGGAGCCAAGTGGAGCC +
Preference number: 4 (lower is better)
Translates to: WKPTGRTGDPLGSERSQVRPPGK*EEPSGA
Trigger: GGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCG...CACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGGTTTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp GAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTAGTCTGTGGCTCTGGTaGGCTCACAGGGCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: ERSQVEPSSGRSSRAGTCSLWLW*AHRAWA
Trigger: TGCCCAGGCCCTGTGAGCTCACCAGAGCCACAGACT...ACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
CDS-3UTR TCA 90 bp CAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCCACCTCTGGGCTGTaGGTCTGTGGCTCTGGTGAG +
Preference number: 4 (lower is better)
Translates to: QATPWEVRGAKWSPAVAEATSGL*VCGSGE
Trigger: CTCACCAGAGCCACAGACTCACAGCCCAGAGGTGGC...TTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
CDS-3UTR TCA 90 bp GGAGGGAGCTGTTTGGACACACAATCAAGCTCAGCCCCCGACAGTCACATGCCACAGCCAGCAGGGGGCTaGCCCCACCCGCCTTACCGC +
Preference number: 4 (lower is better)
Translates to: GGSCLDTQSSSAPDSHMPQPAGG*PHPPYR
Trigger: GCGGTAAGGCGGGTGGGGTCAGCCCCCTGCTGGCTG...TGGCATGTGACTGTCGGGGGCTGAGCTTGATTGTGTGTCCAAACAGCTCCCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000426958.1
CDS-3UTR GCA 90 bp GGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGCCATTTCTGTCGATGCTaGTGGCCACCGGCCACCGAA +
Preference number: 4 (lower is better)
Translates to: GAKWSPAVAEAAALGLVGHFCRC*WPPATE
Trigger: TTCGGTGGCCGGTGGCCAGCAGCATCGACAGAAATG...GCCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR GCA 90 bp CCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCTCTCATTTCTGTCGATaGTGCTGGCCACCGGCCACC +
Preference number: 4 (lower is better)
Translates to: PTGRTGDPLGSERSQVEPSHFCR*CWPPAT
Trigger: GGTGGCCGGTGGCCAGCAGCATCGACAGAAATGAGA...GGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR GCA 90 bp CCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCAGCATCCTGGCCTGCTaGCCCATGTTTTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: PTGRTGDPLGSERSQVEPSILAC*PMFSSS
Trigger: GGAGCTGGAAAACATGGGGCAGCAGGCCAGGATGCT...GGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp AGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTGGTCTGAGAGTCCGCTaGTGTCGGCGGCAAAGAGGC +
Preference number: 4 (lower is better)
Translates to: SERSQVEPSSGRSSRAGTGLRVR*CRRQRG
Trigger: GCCTCTTTGCCGCCGACAGCAGCGGACTCTCAGACC...AGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCACAGGTCAGCCTTCCCTaGTGGTCCAATCTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: GRLGPRHEEWTLGSSGSPQVSLP*WSNLQQ
Trigger: CTGCTGCAGATTGGACCAGCAGGGAAGGCTGACCTG...TGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GAGGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCAGGTCAGCCTTCCCTaGTGGTCCAATCTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: EAGSAQGMKSGRWAPQAPQVSLP*WSNLQQ
Trigger: CTGCTGCAGATTGGACCAGCAGGGAAGGCTGACCTG...GGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp AGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTCTGCACCCCCTTCCCTaGACACTCGATGTCCACCCG +
Preference number: 4 (lower is better)
Translates to: SERSQVEPSSGRSSRAGTLHPLP*TLDVHP
Trigger: CGGGTGGACATCGAGTGTGCAGGGAAGGGGGTGCAG...AGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp TGGGCAGGGTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTCTGCACCCCCTTCCCTaGACACTCGATGTCCACCCG +
Preference number: 4 (lower is better)
Translates to: WAGSGPCCGSKTGAICRGLHPLP*TLDVHP
Trigger: CGGGTGGACATCGAGTGTGCAGGGAAGGGGGTGCAG...ACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGACCCTGCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGCACCACCAGTCCAGCATaGTCTCGTCTGGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: GAKWSPAVAEAAALGLVGTTSPA*SRLAPP
Trigger: AGGAGGAGCCAGACGAGAGCATGCTGGACTGGTGGT...GCCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCAGGTCATTGCTCGGGATaGCCTGGAACATGCCGTAGG +
Preference number: 4 (lower is better)
Translates to: GRLGPRHEEWTLGSSGSPGHCSG*PGTCRR
Trigger: CCTACGGCATGTTCCAGGGCATCCCGAGCAATGACC...TGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp CCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCCGCGGATGTCAGTCTTaGCTAGCCGGATGGCGATGT +
Preference number: 4 (lower is better)
Translates to: PTGRTGDPLGSERSQVEPRGCQS*LAGWRC
Trigger: ACATCGCCATCCGGCTAGGCAAGACTGACATCCGCG...GGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GGGCAGCACTTGACGGGCCAGCTCCCAGCTGCAGCTGAAAGGGCTGGAAGGGCAGCCAACAGCGCCACATaGTCGTCTGTGGGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: GQHLTGQLPAAAERAGRAANSAT*SSVGFL
Trigger: GAGGAAGCCCACAGACGAGCATGTGGCGCTGTTGGC...TGCCCTTCCAGCCCTTTCAGCTGCAGCTGGGAGCTGGCCCGTCAAGTGCTGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp AGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGACTCATCGTTCTCATTaGGGGCCAGGAGGGGCCACC +
Preference number: 4 (lower is better)
Translates to: RSQVEPSSGRSSRAGTCGTHRSH*GPGGAT
Trigger: GGTGGCCCCTCCTGGCCCGCAATGAGAACGATGAGT...CCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp AGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGAAGACCGGTGCTATCTaGAGGGGTCACGGCGGGGAT +
Preference number: 4 (lower is better)
Translates to: RSQVEPSSGRSSRAGTCGKTGAI*RGHGGD
Trigger: ATCCCCGCCGTGACCCCTGCAGATAGCACCGGTCTT...CCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp CAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGGGTCTGGCCCCTGCTaGGGATCAAAGACCGGTGCT +
Preference number: 4 (lower is better)
Translates to: QATPWEVRGAKWSPAVAEGSGPC*GSKTGA
Trigger: AGCACCGGTCTTTGATCCGCAGCAGGGGCCAGACCC...TTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp TCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCAGGGGAGACTCGGAAAGTCACTTTaGCGATCCGGTCGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: SAQGMKSGRWAPQAPQGRLGKSL*RSGRPC
Trigger: GCAGGGGCGACCGGATCGCCAAAGTGACTTTCCGAG...TCTCCCCTGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CCA 90 bp GTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTCACGGCGGCCACTGTGCCGTCAGTaGCCTGATACCGGACCTCCA +
Preference number: 4 (lower is better)
Translates to: VWPLLRIKDRCYLQGSRRPLCRQ*PDTGPP
Trigger: TGGAGGTCCGGTATCAGGCCACTGACGGCACAGTGG...CCGCCGTGACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CCA 90 bp TCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCAGGGGAGACGCAGGTCAATGAAGTaGGTGCCGATGGCCACGTCG +
Preference number: 4 (lower is better)
Translates to: SAQGMKSGRWAPQAPQGRRRSMK*VPMATS
Trigger: CGACGTGGCCATCGGCACCCACTTCATTGACCTGCG...TCTCCCCTGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CCA 90 bp GGGCAGCACTTGACGGGCCAGCTCCCAGCTGCAGCTGAAAGGGCTGGAAGGGCACGCAGGTCAATGAAGTaGGTGCCGATGGCCACGTCG +
Preference number: 4 (lower is better)
Translates to: GQHLTGQLPAAAERAGRARRSMK*VPMATS
Trigger: CGACGTGGCCATCGGCACCCACTTCATTGACCTGCG...TGCCCTTCCAGCCCTTTCAGCTGCAGCTGGGAGCTGGCCCGTCAAGTGCTGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CCA 90 bp TCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCAGGGGAGAGCCGCATTGGTGGAGTaGAGGAGACTGAGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: SAQGMKSGRWAPQAPQGRAALVE*RRLRPG
Trigger: ACCTGGCCTCAGTCTCCTCCACTCCACCAATGCGGC...TCTCCCCTGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CCA 90 bp TGGGCAGGGTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTCTGGTGCGGGATGAGTaGCCCTGGTCCTTGTCAGCG +
Preference number: 4 (lower is better)
Translates to: WAGSGPCCGSKTGAICRGLVRDE*PWSLSA
Trigger: CGCTGACAAGGACCAGGGCCACTCATCCCGCACCAG...ACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGACCCTGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp CAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAACTGGTGCGGGATGAGTaGCCCTGGTCCTTGTCAGCG +
Preference number: 4 (lower is better)
Translates to: QATPWEVRGAKWSPAVAELVRDE*PWSLSA
Trigger: CGCTGACAAGGACCAGGGCCACTCATCCCGCACCAG...TTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp CCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCAGAAGAGCAGGTCCTTaGAGGGCACACGGGCATAGG +
Preference number: 4 (lower is better)
Translates to: PTGRTGDPLGSERSQVEPRRAGP*RAHGHR
Trigger: CCTATGCCCGTGTGCCCTCCAAGGACCTGCTCTTCT...GGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GAGGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCATGTGCGCTCGGAGCTaGAACGCCTGCTTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: EAGSAQGMKSGRWAPQAPMCARS*NACFLV
Trigger: CACCAAGAAGCAGGCGTTCCAGCTCCGAGCGCACAT...GGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTAAGAGGCTGCGGGCCTaGTACATGTGCGCTCGGAGC +
Preference number: 4 (lower is better)
Translates to: ERSQVEPSSGRSSRAGTCKRLRA*YMCARS
Trigger: GCTCCGAGCGCACATGTACCAGGCCCGCAGCCTCTT...ACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp TGGGCAGGGTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTAAGAGGCTGCGGGCCTaGTACATGTGCGCTCGGAGC +
Preference number: 4 (lower is better)
Translates to: WAGSGPCCGSKTGAICRGKRLRA*YMCARS
Trigger: GCTCCGAGCGCACATGTACCAGGCCCGCAGCCTCTT...ACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGACCCTGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGCGCAGGTCTCCAGCTGTaGCGTTGCCACGGTAGATCT +
Preference number: 4 (lower is better)
Translates to: GAKWSPAVAEAAALGLVGAGLQL*RCHGRS
Trigger: AGATCTACCGTGGCAACGCCACAGCTGGAGACCTGC...GCCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp AGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGCAGCATGCTCTCGTCTaGCTCCTCCTCCTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: RSQVEPSSGRSSRAGTCGQHALV*LLLLWL
Trigger: GAGCCAGAGGAGGAGGAGCCAGACGAGAGCATGCTG...CCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GGGCAGCACTTGACGGGCCAGCTCCCAGCTGCAGCTGAAAGGGCTGGAAGGGCATGCGCTCCTCCTCGGTaGAGCCATCCTCATCATCCC +
Preference number: 4 (lower is better)
Translates to: GQHLTGQLPAAAERAGRACAPPR*SHPHHP
Trigger: GGGATGATGAGGATGGCTCCACCGAGGAGGAGCGCA...TGCCCTTCCAGCCCTTTCAGCTGCAGCTGGGAGCTGGCCCGTCAAGTGCTGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GAGGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCCGGGACACGTCCTCTaGGAGTGGCACTTTGTACAC +
Preference number: 4 (lower is better)
Translates to: EAGSAQGMKSGRWAPQAPPGHVL*EWHFVH
Trigger: GTGTACAAAGTGCCACTCCCAGAGGACGTGTCCCGG...GGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTCACGGCGGGGAACATGCCGTAGGTaGAGTCGTAGCCGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: VWPLLRIKDRCYLQGSRRGTCRR*SRSRLP
Trigger: GGGAAGCCGGCTACGACTCCACCTACGGCATGTTCC...CCGCCGTGACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp CAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAACAGGGTGCAGGTCCGTaGCCCGGACCACATAGACTC +
Preference number: 4 (lower is better)
Translates to: QATPWEVRGAKWSPAVAEQGAGP*PGPHRL
Trigger: GAGTCTATGTGGTCCGGGCCACGGACCTGCACCCTG...TTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GAGGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCAGCCACCGTCAGCATaGATTCCATGGGGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: EAGSAQGMKSGRWAPQAPQPPSA*IPWGRR
Trigger: CCTCCTTCCCCATGGAATCCATGCTGACGGTGGCTG...GGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTCACGGCGGAGGCGTCCCAGGGGCTaGCATGTCCATGGGGAACAT +
Preference number: 4 (lower is better)
Translates to: VWPLLRIKDRCYLQGSRRRRPRG*HVHGEH
Trigger: ATGTTCCCCATGGACATGCCAGCCCCTGGGACGCCT...CCGCCGTGACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp CAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAACCATGGTGCACTGCTTaGCTGTCTTTGCGCCCCGCG +
Preference number: 4 (lower is better)
Translates to: QATPWEVRGAKWSPAVAEPWCTA*LSLRPA
Trigger: CGCGGGGCGCAAAGACAGCCAAGCAGTGCACCATGG...TTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGCCGGTGGCCATCTCCATaGTGCACTGCTTGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: GAKWSPAVAEAAALGLVGRWPSP*CTAWLS
Trigger: AGACAGCCAAGCAGTGCACCATGGAGATGGCCACCG...GCCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GAGGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCGGTGGCCATCTCCATaGTGCACTGCTTGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: EAGSAQGMKSGRWAPQAPRWPSP*CTAWLS
Trigger: AGACAGCCAAGCAGTGCACCATGGAGATGGCCACCG...GGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCAGCTCCCCAGGGGAGATaGGAAAGAGTCCAAGCCACT +
Preference number: 4 (lower is better)
Translates to: GRLGPRHEEWTLGSSGSPAPQGR*ERVQAT
Trigger: AGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGC...TGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCAGGTCAGAGGGGCGGGACTaGGCAAGCCGCAGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: APQGRWERVQATERKCGRSEGRD*ASRSLG
Trigger: CCCCAGGCTGCGGCTTGCCCAGTCCCGCCCCTCTGA...CCTGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp CAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGGCGCCTCAGCCAGGTaGGGCAAGAGAGACCCATTC +
Preference number: 4 (lower is better)
Translates to: QATPWEVRGAKWSPAVAEGASAR*GKRDPF
Trigger: GAATGGGTCTCTCTTGCCCCACCTGGCTGAGGCGCC...TTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GGGCAGCACTTGACGGGCCAGCTCCCAGCTGCAGCTGAAAGGGCTGGAAGGGCACTTGTGGGCAGGGTCTaGCCCCTGCTGCGGATCAAA +
Preference number: 4 (lower is better)
Translates to: GQHLTGQLPAAAERAGRALVGRV*PLLRIK
Trigger: TTTGATCCGCAGCAGGGGCCAGACCCTGCCCACAAG...TGCCCTTCCAGCCCTTTCAGCTGCAGCTGGGAGCTGGCCCGTCAAGTGCTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GGGCAGCACTTGACGGGCCAGCTCCCAGCTGCAGCTGAAAGGGCTGGAAGGGCAGGGCAGAGGGAGCTCTaGGAAGCCATGGAAACCCAC +
Preference number: 4 (lower is better)
Translates to: GQHLTGQLPAAAERAGRAGQREL*EAMETH
Trigger: GTGGGTTTCCATGGCTTCCCAGAGCTCCCTCTGCCC...TGCCCTTCCAGCCCTTTCAGCTGCAGCTGGGAGCTGGCCCGTCAAGTGCTGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp TCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCAGGGGAGATTCCCACGTCCATTTTaGAGGAGCCCACCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: SAQGMKSGRWAPQAPQGRFPRPF*RSPPGC
Trigger: GCACCCTGGTGGGCTCCTTCAAAATGGACGTGGGAA...TCTCCCCTGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR TCA 90 bp AGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGTTCCCACGTCCATTTTaGAGGAGCCCACCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: RSQVEPSSGRSSRAGTCGFPRPF*RSPPGC
Trigger: GCACCCTGGTGGGCTCCTTCAAAATGGACGTGGGAA...CCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR TCA 90 bp GAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTCGAAGGTCCGGCCCATaGAGTCAGCTTTGCCCATGG +
Preference number: 4 (lower is better)
Translates to: ERSQVEPSSGRSSRAGTCRRSGP*SQLCPW
Trigger: CCATGGGCAAAGCTGACTTCATGGGCCGGACCTTCG...ACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp CAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAACTCCTTGCCCTTCATTaGCCCCTTCAGGCCCTCGGT +
Preference number: 4 (lower is better)
Translates to: QATPWEVRGAKWSPAVAELLALH*PLQALG
Trigger: ACCGAGGGCCTGAAGGGGTCAATGAAGGGCAAGGAG...TTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp GGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGCTGCCCCGAAGCAAGTTaGAAGTGTGCAGCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: GAKWSPAVAEAAALGLVGCPEAS*KCAASP
Trigger: AGGACTGGCTGCACACTTTCAACTTGCTTCGGGGCA...GCCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp GAGGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCTGCCCCGAAGCAAGTTaGAAGTGTGCAGCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: EAGSAQGMKSGRWAPQAPCPEAS*KCAASP
Trigger: AGGACTGGCTGCACACTTTCAACTTGCTTCGGGGCA...GGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp TCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCAGGGGAGACTCGGACCAGCACATTaGTGGGGTCATTGCTCGGGA +
Preference number: 4 (lower is better)
Translates to: SAQGMKSGRWAPQAPQGRLGPAH*WGHCSG
Trigger: TCCCGAGCAATGACCCCATCAATGTGCTGGTCCGAG...TCTCCCCTGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp GGGCAGCACTTGACGGGCCAGCTCCCAGCTGCAGCTGAAAGGGCTGGAAGGGCAGGTCAGCTTTGCCGTTaGTGTCAGCAGGGTGCAGGT +
Preference number: 4 (lower is better)
Translates to: GQHLTGQLPAAAERAGRAGQLCR*CQQGAG
Trigger: ACCTGCACCCTGCTGACATCAACGGCAAAGCTGACC...TGCCCTTCCAGCCCTTTCAGCTGCAGCTGGGAGCTGGCCCGTCAAGTGCTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp GCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCAGGCCGGCTTGTCGGGGTTaGGCAGCGGCCTCGTCTCCA +
Preference number: 4 (lower is better)
Translates to: APQGRWERVQATERKCGRPACRG*AAASSP
Trigger: TGGAGACGAGGCCGCTGCTCAACCCCGACAAGCCGG...CCTGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp GAGGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCTGGACTTCTCCCCTGTaGAGAAGTCGTCGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: EAGSAQGMKSGRWAPQAPWTSPL*RSRRPP
Trigger: TGGAGGACGACGACTTCTTCACAGGGGAGAAGTCCA...GGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp CAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAAGTTGCCCTCGCCAGTaGGGGAGTGGTAGTGGACGT +
Preference number: 4 (lower is better)
Translates to: QATPWEVRGAKWSPAVAESCPRQ*GSGSGR
Trigger: ACGTCCACTACCACTCCCTCACTGGCGAGGGCAACT...TTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp GGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGCACTCCTTCTTGGAGATaGCGATCTTCTCCTCCGCCG +
Preference number: 4 (lower is better)
Translates to: GAKWSPAVAEAAALGLVGTPSWR*RSSPPP
Trigger: CGGCGGAGGAGAAGATCGTCATCTCCAAGAAGGAGT...GCCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp GAGGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCAGTAGCGAGCCGACTTaGGAGGGTTCAGGAACCAGA +
Preference number: 4 (lower is better)
Translates to: EAGSAQGMKSGRWAPQAPSSEPT*EGSGTR
Trigger: TCTGGTTCCTGAACCCTCTCAAGTCGGCTCGCTACT...GGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
CDS-3UTR TCA 90 bp TCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCAGGGGAGAGGAGCAGCAACAGTTTaGGGAGCAGCCAGCGATACG +
Preference number: 4 (lower is better)
Translates to: SAQGMKSGRWAPQAPQGRGAATV*GAASDT
Trigger: CGTATCGCTGGCTGCTCCTCAAACTGTTGCTGCTCC...TCTCCCCTGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
CDS-3UTR TCA 90 bp AGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGCCCCGAGGATTTTCTTaGCCAGGTAGCCAGGCACAG +
Preference number: 4 (lower is better)
Translates to: RSQVEPSSGRSSRAGTCGPRGFS*PGSQAQ
Trigger: CTGTGCCTGGCTACCTGGTCAAGAAAATCCTCGGGG...CCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
CDS-3UTR TCA 90 bp GGGCAGCACTTGACGGGCCAGCTCCCAGCTGCAGCTGAAAGGGCTGGAAGGGCACCCCGAGGATTTTCTTaGCCAGGTAGCCAGGCACAG +
Preference number: 4 (lower is better)
Translates to: GQHLTGQLPAAAERAGRAPRGFS*PGSQAQ
Trigger: CTGTGCCTGGCTACCTGGTCAAGAAAATCCTCGGGG...TGCCCTTCCAGCCCTTTCAGCTGCAGCTGGGAGCTGGCCCGTCAAGTGCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
CDS-3UTR GCA 90 bp GGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGCTCCTCTACCACCTTCTaGAGCACCATGCGGAAGGTC +
Preference number: 4 (lower is better)
Translates to: GAKWSPAVAEAAALGLVGSSTTF*STMRKV
Trigger: GACCTTCCGCATGGTGCTGCAGAAGGTGGTAGAGGA...GCCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR GCA 90 bp CAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAACGCAGCATCCTGGCCTaGTGCCCCATGTTTTCCAGC +
Preference number: 4 (lower is better)
Translates to: QATPWEVRGAKWSPAVAERSILA*CPMFSS
Trigger: GCTGGAAAACATGGGGCAGCAGGCCAGGATGCTGCG...TTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCAAGGAAGCGCAGCTTCTaGAGGAAGTTCTGGCACAGC +
Preference number: 4 (lower is better)
Translates to: GRLGPRHEEWTLGSSGSPRKRSF*RKFWHS
Trigger: GCTGTGCCAGAACTTCCTGCAGAAGCTGCGCTTCCT...TGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp CCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCAGGAAGCGCAGCTTCTaGAGGAAGTTCTGGCACAGC +
Preference number: 4 (lower is better)
Translates to: PTGRTGDPLGSERSQVEPRKRSF*RKFWHS
Trigger: GCTGTGCCAGAACTTCCTGCAGAAGCTGCGCTTCCT...GGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp AGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTCCTTGGCGCAGTCCTTaGCAGTCTCCTCCTCCACGA +
Preference number: 4 (lower is better)
Translates to: SERSQVEPSSGRSSRAGTPWRSP*QSPPPR
Trigger: TCGTGGAGGAGGAGACTGGCAAGGACTGCGCCAAGG...AGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp TGGAAACCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGGTCTGAGAGTCCGCTaGTGTCGGCGGCAAAGAGGC +
Preference number: 4 (lower is better)
Translates to: WKPTGRTGDPLGSERSQVGLRVR*CRRQRG
Trigger: GCCTCTTTGCCGCCGACAGCAGCGGACTCTCAGACC...CACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGGTTTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp CCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCGCAGTACGCCTCGTCTaGCATCTTCACCAGGGGTTT +
Preference number: 4 (lower is better)
Translates to: PTGRTGDPLGSERSQVEPAVRLV*HLHQGF
Trigger: AAACCCCTGGTGAAGATGGCAGACGAGGCGTACTGC...GGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTCACGGCGGCAGGTCAGCCTTCCCTaGTGGTCCAATCTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: VWPLLRIKDRCYLQGSRRQVSLP*WSNLQQ
Trigger: CTGCTGCAGATTGGACCAGCAGGGAAGGCTGACCTG...CCGCCGTGACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp TGGGCAGGGTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTTGGATCAGGGACGACTaGACCCCCTTCCCTGCACAC +
Preference number: 4 (lower is better)
Translates to: WAGSGPCCGSKTGAICRGWIRDD*TPFPAH
Trigger: GTGTGCAGGGAAGGGGGTGCAGTCGTCCCTGATCCA...ACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGACCCTGCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp AGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGGGATGCCCTGGAACATaGCGTAGGTGGAGTCGTAGC +
Preference number: 4 (lower is better)
Translates to: RSQVEPSSGRSSRAGTCGGCPGT*RRWSRS
Trigger: GCTACGACTCCACCTACGGCATGTTCCAGGGCATCC...CCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GGGCAGCACTTGACGGGCCAGCTCCCAGCTGCAGCTGAAAGGGCTGGAAGGGCAGGATGCCCTGGAACATaGCGTAGGTGGAGTCGTAGC +
Preference number: 4 (lower is better)
Translates to: GQHLTGQLPAAAERAGRAGCPGT*RRWSRS
Trigger: GCTACGACTCCACCTACGGCATGTTCCAGGGCATCC...TGCCCTTCCAGCCCTTTCAGCTGCAGCTGGGAGCTGGCCCGTCAAGTGCTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp AGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGGGTCATTGCTCGGGATaGCCTGGAACATGCCGTAGG +
Preference number: 4 (lower is better)
Translates to: RSQVEPSSGRSSRAGTCGGHCSG*PGTCRR
Trigger: CCTACGGCATGTTCCAGGGCATCCCGAGCAATGACC...CCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp TGGAAACCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGTTGATGTCAGCAGGGTaGAGGTCCGTGGCCCGGACC +
Preference number: 4 (lower is better)
Translates to: WKPTGRTGDPLGSERSQVLMSAG*RSVART
Trigger: GGTCCGGGCCACGGACCTGCACCCTGCTGACATCAA...CACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGGTTTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTCACGGCGGCGCGGATGTCAGTCTTaGCTAGCCGGATGGCGATGT +
Preference number: 4 (lower is better)
Translates to: VWPLLRIKDRCYLQGSRRRGCQS*LAGWRC
Trigger: ACATCGCCATCCGGCTAGGCAAGACTGACATCCGCG...CCGCCGTGACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGCCCACTTTGCCGTCTTTaGAGAGGCGGGTCAGGATCT +
Preference number: 4 (lower is better)
Translates to: GAKWSPAVAEAAALGLVGPLCRL*RGGSGS
Trigger: AGATCCTGACCCGCCTCTGCAAAGACGGCAAAGTGG...GCCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp TGGAAACCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGTCCTGCTTGTCCTCCTaGTGGCCCTTCAGCCACCCC +
Preference number: 4 (lower is better)
Translates to: WKPTGRTGDPLGSERSQVSCLSS*WPFSHP
Trigger: GGGGTGGCTGAAGGGCCAGCAGGAGGACAAGCAGGA...CACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGGTTTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp CCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCAGCTGGCGGCCTTCATaGCCCAAGGAGCTTTTTGAC +
Preference number: 4 (lower is better)
Translates to: PTGRTGDPLGSERSQVEPSWRPS*PKELFD
Trigger: GTCAAAAAGCTCCTTGGGGCATGAAGGCCGCCAGCT...GGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GAGGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCAGCTGGCGGCCTTCATaGCCCAAGGAGCTTTTTGAC +
Preference number: 4 (lower is better)
Translates to: EAGSAQGMKSGRWAPQAPSWRPS*PKELFD
Trigger: GTCAAAAAGCTCCTTGGGGCATGAAGGCCGCCAGCT...GGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTCACGGCGGCGGATCAAAGACCGGTaGTATCTGCAGGGGTCACGG +
Preference number: 4 (lower is better)
Translates to: VWPLLRIKDRCYLQGSRRRIKDR*YLQGSR
Trigger: CCGTGACCCCTGCAGATAGCACCGGTCTTTGATCCG...CCGCCGTGACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp TGGAAACCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGAAGGCCATGCTGGTGTaGGCTGCCTGGCACTGCCAG +
Preference number: 4 (lower is better)
Translates to: WKPTGRTGDPLGSERSQVKAMLV*AAWHCQ
Trigger: CTGGCAGTGCCAGGCAGCCCACACCAGCATGGCCTT...CACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGGTTTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CCA 90 bp CCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCTTTTGCCGAGCTTCATaGCGGAGAACACGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: PTGRTGDPLGSERSQVEPFCRAS*RRTRSS
Trigger: GGAGGAGCGTGTTCTCCGCCATGAAGCTCGGCAAAA...GGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CCA 90 bp TGGAAACCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGTCGGGAATGCTGTGCTaGGGCTCGTCCGCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: WKPTGRTGDPLGSERSQVSGMLC*GSSARK
Trigger: CTTCCTGGCGGACGAGCCCCAGCACAGCATTCCCGA...CACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGGTTTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp AGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGGAAGCCCCGCTTCCCTaGCAGCTTAAGGAAGAGCGT +
Preference number: 4 (lower is better)
Translates to: RSQVEPSSGRSSRAGTCGEAPLP*QLKEER
Trigger: ACGCTCTTCCTTAAGCTGCCAGGGAAGCGGGGCTTC...CCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCAGCATCTGGTCCCAGGTaGGACACAGGGTCTCATTCA +
Preference number: 4 (lower is better)
Translates to: GRLGPRHEEWTLGSSGSPASGPR*DTGSHS
Trigger: TGAATGAGACCCTGTGTCCCACCTGGGACCAGATGC...TGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GGGCAGCACTTGACGGGCCAGCTCCCAGCTGCAGCTGAAAGGGCTGGAAGGGCATCGAACACCAGCATCTaGTCCCAGGTGGGACACAGG +
Preference number: 4 (lower is better)
Translates to: GQHLTGQLPAAAERAGRASNTSI*SQVGHR
Trigger: CCTGTGTCCCACCTGGGACCAGATGCTGGTGTTCGA...TGCCCTTCCAGCCCTTTCAGCTGCAGCTGGGAGCTGGCCCGTCAAGTGCTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp AGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGGCAGGTCTCCAGCTGTaGCGTTGCCACGGTAGATCT +
Preference number: 4 (lower is better)
Translates to: RSQVEPSSGRSSRAGTCGAGLQL*RCHGRS
Trigger: AGATCTACCGTGGCAACGCCACAGCTGGAGACCTGC...CCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCAGGCTCGATGTCCACCCGTaGCCGGTCCACCTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: APQGRWERVQATERKCGRLDVHP*PVHLGQ
Trigger: CTGGCCCAGGTGGACCGGCCACGGGTGGACATCGAG...CCTGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp AGGAAGAGCCCCAACATGAGCAGCCCCAACAGCGCCAGCACGATCTTGATGATGCCGTGGTGTTCCAGCTaGGGGCCGAGCGGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: RKSPNMSSPNSASTILMMPWCSS*GPSGLG
Trigger: CCCCAGACCGCTCGGCCCCCAGCTGGAACACCACGG...CATCATCAAGATCGTGCTGGCGCTGTTGGGGCTGCTCATGTTGGGGCTCTTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
CDS-3UTR CCA 90 bp CAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGGAACATGCCGTAGGTaGAGTCGTAGCCGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: QATPWEVRGAKWSPAVAEGTCRR*SRSRLP
Trigger: GGGAAGCCGGCTACGACTCCACCTACGGCATGTTCC...TTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCATCTTGCCTAGCCGGATaGCGATGTAGGGGTCAGCTT +
Preference number: 4 (lower is better)
Translates to: GRLGPRHEEWTLGSSGSPSCLAG*RCRGQL
Trigger: AAGCTGACCCCTACATCGCCATCCGGCTAGGCAAGA...TGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp AGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGCAGCCACCGTCAGCATaGATTCCATGGGGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: RSQVEPSSGRSSRAGTCGQPPSA*IPWGRR
Trigger: CCTCCTTCCCCATGGAATCCATGCTGACGGTGGCTG...CCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp TGGAAACCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGTGCTTGTCCTCCTGCTaGCCCTTCAGCCACCCCCTC +
Preference number: 4 (lower is better)
Translates to: WKPTGRTGDPLGSERSQVCLSSC*PFSHPL
Trigger: GAGGGGGTGGCTGAAGGGCCAGCAGGAGGACAAGCA...CACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGGTTTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp TGGGCAGGGTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTTCAGGTCCAGCTCGATaGCCCCCAGGAAGTCGTCAG +
Preference number: 4 (lower is better)
Translates to: WAGSGPCCGSKTGAICRGSGPAR*PPGSRQ
Trigger: CTGACGACTTCCTGGGGGCCATCGAGCTGGACCTGA...ACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGACCCTGCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCATCAGGAGTCTTCCTCTaGAGCCTGGGCCTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: GRLGPRHEEWTLGSSGSPSGVFL*SLGLKK
Trigger: CTTCTTCAGGCCCAGGCTCCAGAGGAAGACTCCTGA...TGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GAGGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCTCAGGAGTCTTCCTCTaGAGCCTGGGCCTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: EAGSAQGMKSGRWAPQAPSGVFL*SLGLKK
Trigger: CTTCTTCAGGCCCAGGCTCCAGAGGAAGACTCCTGA...GGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp AGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTCTTGTGGGCAGGGTCTaGCCCCTGCTGCGGATCAAA +
Preference number: 4 (lower is better)
Translates to: SERSQVEPSSGRSSRAGTLVGRV*PLLRIK
Trigger: TTTGATCCGCAGCAGGGGCCAGACCCTGCCCACAAG...AGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp TGGGCAGGGTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTCTTGTGGGCAGGGTCTaGCCCCTGCTGCGGATCAAA +
Preference number: 4 (lower is better)
Translates to: WAGSGPCCGSKTGAICRGLVGRV*PLLRIK
Trigger: TTTGATCCGCAGCAGGGGCCAGACCCTGCCCACAAG...ACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGACCCTGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTCACGGCGGGTGAGAGGAGCCAAGTaGAGCCCAGCAGTGGCAGAA +
Preference number: 4 (lower is better)
Translates to: VWPLLRIKDRCYLQGSRRVRGAK*SPAVAE
Trigger: TTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCAC...CCGCCGTGACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp TGGGCAGGGTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTGGGCAGAGGGAGCTCTaGGAAGCCATGGAAACCCAC +
Preference number: 4 (lower is better)
Translates to: WAGSGPCCGSKTGAICRGGQREL*EAMETH
Trigger: GTGGGTTTCCATGGCTTCCCAGAGCTCCCTCTGCCC...ACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGACCCTGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp AGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTGGGCAGAGGGAGCTCTaGGAAGCCATGGAAACCCAC +
Preference number: 4 (lower is better)
Translates to: SERSQVEPSSGRSSRAGTGQREL*EAMETH
Trigger: GTGGGTTTCCATGGCTTCCCAGAGCTCCCTCTGCCC...AGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp TCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCAGGGGAGAGGAAGAAGCCACCTCTaGGCTGTGAGTCTGTGGCTC +
Preference number: 4 (lower is better)
Translates to: SAQGMKSGRWAPQAPQGRGRSHL*AVSLWL
Trigger: GAGCCACAGACTCACAGCCCAGAGGTGGCTTCTTCC...TCTCCCCTGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
CDS-3UTR CCA 90 bp GTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTCACGGCGGGGAAGAAGCCACCTCTaGGCTGTGAGTCTGTGGCTC +
Preference number: 4 (lower is better)
Translates to: VWPLLRIKDRCYLQGSRRGRSHL*AVSLWL
Trigger: GAGCCACAGACTCACAGCCCAGAGGTGGCTTCTTCC...CCGCCGTGACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
CDS-3UTR CCA 90 bp CCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCTGTGAATCAGGAGTGTaGGTGATGCTGGGCCACAGC +
Preference number: 4 (lower is better)
Translates to: PTGRTGDPLGSERSQVEPCESGV*VMLGHS
Trigger: GCTGTGGCCCAGCATCACCCACACTCCTGATTCACA...GGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000402415.8
CDS-3UTR TCA 90 bp GAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTAGGATGGCCCACTTGTaGTGGAACTGGTGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: ERSQVEPSSGRSSRAGTCRMAHL*WNWCSG
Trigger: GCCAGAGCACCAGTTCCATCACAAGTGGGCCATCCT...ACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR TCA 90 bp CAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAAGGATGGCCCACTTGTaGTGGAACTGGTGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: QATPWEVRGAKWSPAVAERMAHL*WNWCSG
Trigger: GCCAGAGCACCAGTTCCATCACAAGTGGGCCATCCT...TTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR TCA 90 bp CAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAACCTTGTGGGGCGTCTTaGTGTTGTCCCCTTTGCCCA +
Preference number: 4 (lower is better)
Translates to: QATPWEVRGAKWSPAVAEPCGAS*CCPLCP
Trigger: TGGGCAAAGGGGACAACATCAAGACGCCCCACAAGG...TTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR TCA 90 bp TGGGCAGGGTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTTCTTGCGCAGGTCAATaGAGTGGGTGCCGATGGCCA +
Preference number: 4 (lower is better)
Translates to: WAGSGPCCGSKTGAICRGSCAGQ*SGCRWP
Trigger: TGGCCATCGGCACCCACTTCATTGACCTGCGCAAGA...ACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGACCCTGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR TCA 90 bp GAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTCCGGCCACCAGCTCTTaGTGTAGATGCAGGGCTTTC +
Preference number: 4 (lower is better)
Translates to: ERSQVEPSSGRSSRAGTCPATSS*CRCRAF
Trigger: GAAAGCCCTGCATCTACATCAAGAGCTGGTGGCCGG...ACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR TCA 90 bp CCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCCGGCAATGTGGTCCATaGTGTTGGCATTGTAGAGGC +
Preference number: 4 (lower is better)
Translates to: PTGRTGDPLGSERSQVEPRQCGP*CWHCRG
Trigger: GCCTCTACAATGCCAACATCATGGACCACATTGCCG...GGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR TCA 90 bp GCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCAGGCCCTCATGCAGGACTTaGGGCGCTCCCGGTCAAGCC +
Preference number: 4 (lower is better)
Translates to: APQGRWERVQATERKCGRPSCRT*GAPGQA
Trigger: GGCTTGACCGGGAGCGCCTCAAGTCCTGCATGAGGG...CCTGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp TGGAAACCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGCCTTGCGCTGTTTGCTaGGGCCCAGCCACAGGTACA +
Preference number: 4 (lower is better)
Translates to: WKPTGRTGDPLGSERSQVPCAVC*GPATGT
Trigger: TGTACCTGTGGCTGGGCCTCAGCAAACAGCGCAAGG...CACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGGTTTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp GGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGCCAGCCACATCCACCTTaGCAACAGCTTCAGAAGTCG +
Preference number: 4 (lower is better)
Translates to: GAKWSPAVAEAAALGLVGQPHPP*QQLQKS
Trigger: CGACTTCTGAAGCTGTTGTCAAGGTGGATGTGGCTG...GCCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp TCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCAGGGGAGATGCCCCGAAGCAAGTTaGAAGTGTGCAGCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: SAQGMKSGRWAPQAPQGRCPEAS*KCAASP
Trigger: AGGACTGGCTGCACACTTTCAACTTGCTTCGGGGCA...TCTCCCCTGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp GAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTCTCGGACCAGCACATTaGTGGGGTCATTGCTCGGGA +
Preference number: 4 (lower is better)
Translates to: ERSQVEPSSGRSSRAGTCLGPAH*WGHCSG
Trigger: TCCCGAGCAATGACCCCATCAATGTGCTGGTCCGAG...ACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp AGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTGGTCAGCTTTGCCGTTaGTGTCAGCAGGGTGCAGGT +
Preference number: 4 (lower is better)
Translates to: SERSQVEPSSGRSSRAGTGQLCR*CQQGAG
Trigger: ACCTGCACCCTGCTGACATCAACGGCAAAGCTGACC...AGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp CCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCTCTTGGTTTCCCCAATaGGGTCATCAGTGCCCACCA +
Preference number: 4 (lower is better)
Translates to: PTGRTGDPLGSERSQVEPSWFPQ*GHQCPP
Trigger: TGGTGGGCACTGATGACCTCATTGGGGAAACCAAGA...GGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp TGGAAACCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGAGTTGCCCTCGCCAGTaGGGGAGTGGTAGTGGACGT +
Preference number: 4 (lower is better)
Translates to: WKPTGRTGDPLGSERSQVSCPRQ*GSGSGR
Trigger: ACGTCCACTACCACTCCCTCACTGGCGAGGGCAACT...CACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGGTTTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp TCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCAGGGGAGACCTCCACCTTGCCCGTaGGCTCAAACTCATCGTTCT +
Preference number: 4 (lower is better)
Translates to: SAQGMKSGRWAPQAPQGRPPPCP*AQTHRS
Trigger: AGAACGATGAGTTTGAGCTCACGGGCAAGGTGGAGG...TCTCCCCTGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp GAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGAGCAGCAACAGTTTaGGGAGCAGCCAGCGATACG +
Preference number: 4 (lower is better)
Translates to: ERSQVEPSSGRSSRAGTCGAATV*GAASDT
Trigger: CGTATCGCTGGCTGCTCCTCAAACTGTTGCTGCTCC...ACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
CDS-3UTR TCA 90 bp GGGCAGCACTTGACGGGCCAGCTCCCAGCTGCAGCTGAAAGGGCTGGAAGGGCAAAGAGTCCAAGCCACTaGAAGGAAATGCGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: GQHLTGQLPAAAERAGRAKSPSH*KEMRQG
Trigger: GCCCTGCCGCATTTCCTTTCAGTGGCTTGGACTCTT...TGCCCTTCCAGCCCTTTCAGCTGCAGCTGGGAGCTGGCCCGTCAAGTGCTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp GCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCAGGGCTCGGCCCAAGGCATaGAGAGTGGACGCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: APQGRWERVQATERKCGRARPKA*RVDAGL
Trigger: GAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGC...CCTGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp GTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTCACGGCGGTCGCTAGGGCCATCCTaGGTATCGGTCATCATGAGG +
Preference number: 4 (lower is better)
Translates to: VWPLLRIKDRCYLQGSRRSLGPS*VSVIMR
Trigger: CCTCATGATGACCGATACTCAGGATGGCCCTAGCGA...CCGCCGTGACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
CDS-3UTR TCA 90 bp CCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCCAGGCCTTCTTCCTGTaGATCAGGAGTGTGGGTGAT +
Preference number: 4 (lower is better)
Translates to: PTGRTGDPLGSERSQVEPQAFFL*IRSVGD
Trigger: ATCACCCACACTCCTGATTCACAGGAAGAAGGCCTG...GGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000402415.8
CDS-3UTR GCA 90 bp GAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTCATTTCTGTCGATGCTaGTGGCCACCGGCCACCGAA +
Preference number: 4 (lower is better)
Translates to: ERSQVEPSSGRSSRAGTCHFCRC*WPPATE
Trigger: TTCGGTGGCCGGTGGCCAGCAGCATCGACAGAAATG...ACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR GCA 90 bp TCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCAGGGGAGATCCTCTACCACCTTCTaGAGCACCATGCGGAAGGTC +
Preference number: 4 (lower is better)
Translates to: SAQGMKSGRWAPQAPQGRSSTTF*STMRKV
Trigger: GACCTTCCGCATGGTGCTGCAGAAGGTGGTAGAGGA...TCTCCCCTGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR GCA 90 bp GGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGCTGTGAGACCGGTTTTTaGCGAGCTTCATGGCGGAGA +
Preference number: 4 (lower is better)
Translates to: GAKWSPAVAEAAALGLVGCETGF*RASWRR
Trigger: TCTCCGCCATGAAGCTCGGCAAAAACCGGTCTCACA...GCCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR GCA 90 bp GAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTAGCATCCTGGCCTGCTaGCCCATGTTTTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: ERSQVEPSSGRSSRAGTCSILAC*PMFSSS
Trigger: GGAGCTGGAAAACATGGGGCAGCAGGCCAGGATGCT...ACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCAGGCGGCGGCAAAGAGGCTaGGGGCCTGGTACATGTGCG +
Preference number: 4 (lower is better)
Translates to: APQGRWERVQATERKCGRRRQRG*GPGTCA
Trigger: CGCACATGTACCAGGCCCGCAGCCTCTTTGCCGCCG...CCTGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTCACGGCGGGCAGTACGCCTCGTCTaGCATCTTCACCAGGGGTTT +
Preference number: 4 (lower is better)
Translates to: VWPLLRIKDRCYLQGSRRAVRLV*HLHQGF
Trigger: AAACCCCTGGTGAAGATGGCAGACGAGGCGTACTGC...CCGCCGTGACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp AGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGCTCCAGCTGTGGCGTTaGCACGGTAGATCTGGTAGT +
Preference number: 4 (lower is better)
Translates to: RSQVEPSSGRSSRAGTCGLQLWR*HGRSGS
Trigger: ACTACCAGATCTACCGTGGCAACGCCACAGCTGGAG...CCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTCACGGCGGCTCCAGCTGTGGCGTTaGCACGGTAGATCTGGTAGT +
Preference number: 4 (lower is better)
Translates to: VWPLLRIKDRCYLQGSRRLQLWR*HGRSGS
Trigger: ACTACCAGATCTACCGTGGCAACGCCACAGCTGGAG...CCGCCGTGACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp TGGGCAGGGTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTATGTTCAAGGGCGGGTaGAGCAGCTCGTTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: WAGSGPCCGSKTGAICRGMFKGG*SSSFSG
Trigger: CCCAGAGAACGAGCTGCTGCACCCGCCCTTGAACAT...ACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGACCCTGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp CAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAATGTTCAAGGGCGGGTaGAGCAGCTCGTTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: QATPWEVRGAKWSPAVAEMFKGG*SSSFSG
Trigger: CCCAGAGAACGAGCTGCTGCACCCGCCCTTGAACAT...TTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTACCACCAGTCCAGCATaGTCTCGTCTGGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: ERSQVEPSSGRSSRAGTCTTSPA*SRLAPP
Trigger: AGGAGGAGCCAGACGAGAGCATGCTGGACTGGTGGT...ACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGATGCCCTGGAACATaGCGTAGGTGGAGTCGTAGC +
Preference number: 4 (lower is better)
Translates to: ERSQVEPSSGRSSRAGTCGCPGT*RRWSRS
Trigger: GCTACGACTCCACCTACGGCATGTTCCAGGGCATCC...ACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp TGGGCAGGGTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTCGCGGATGTCAGTCTTaGCTAGCCGGATGGCGATGT +
Preference number: 4 (lower is better)
Translates to: WAGSGPCCGSKTGAICRGRGCQS*LAGWRC
Trigger: ACATCGCCATCCGGCTAGGCAAGACTGACATCCGCG...ACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGACCCTGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp TGGAAACCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGCCAACAGCGCCACATaGTCGTCTGTGGGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: WKPTGRTGDPLGSERSQVANSAT*SSVGFL
Trigger: GAGGAAGCCCACAGACGAGCATGTGGCGCTGTTGGC...CACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGGTTTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCAGGGGCCTCGTCTCCACATaGTCTGGCACCAGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: APQGRWERVQATERKCGRGLVST*SGTRRQ
Trigger: CTGCCGCCTGGTGCCAGAGCATGTGGAGACGAGGCC...CCTGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp TGGAAACCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGTGGACGTCTGTGTCCTaGTTGTCCTCCTGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: WKPTGRTGDPLGSERSQVWTSVS*LSSCWP
Trigger: GGGCCAGCAGGAGGACAAGCAGGACACAGACGTCCA...CACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGGTTTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp AGGCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCATCCGCATCCCAGATCTaGAGGGTGAGCCGCGCGGGG +
Preference number: 4 (lower is better)
Translates to: RLPRGDGKESKPLKGNAASASQI*RVSRAG
Trigger: CCCCGCGCGGCTCACCCTGCAGATCTGGGATGCGGA...TGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTCACGGCGGATCTCCATGGTGCACTaGTTGGCTGTCTTTGCGCCC +
Preference number: 4 (lower is better)
Translates to: VWPLLRIKDRCYLQGSRRISMVH*LAVFAP
Trigger: GGGCGCAAAGACAGCCAAGCAGTGCACCATGGAGAT...CCGCCGTGACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp TCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCAGGGGAGAATCTCCATGGTGCACTaGTTGGCTGTCTTTGCGCCC +
Preference number: 4 (lower is better)
Translates to: SAQGMKSGRWAPQAPQGRISMVH*LAVFAP
Trigger: GGGCGCAAAGACAGCCAAGCAGTGCACCATGGAGAT...TCTCCCCTGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp CCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCTGGCCATCTCCATGGTaGACTGCTTGGCTGTCTTTG +
Preference number: 4 (lower is better)
Translates to: PTGRTGDPLGSERSQVEPWPSPW*TAWLSL
Trigger: CAAAGACAGCCAAGCAGTGCACCATGGAGATGGCCA...GGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GAGGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCTGGCCATCTCCATGGTaGACTGCTTGGCTGTCTTTG +
Preference number: 4 (lower is better)
Translates to: EAGSAQGMKSGRWAPQAPWPSPW*TAWLSL
Trigger: CAAAGACAGCCAAGCAGTGCACCATGGAGATGGCCA...GGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTCACGGCGGAGCTGGCGGCCTTCATaGCCCAAGGAGCTTTTTGAC +
Preference number: 4 (lower is better)
Translates to: VWPLLRIKDRCYLQGSRRSWRPS*PKELFD
Trigger: GTCAAAAAGCTCCTTGGGGCATGAAGGCCGCCAGCT...CCGCCGTGACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp CAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAACGGATCAAAGACCGGTaGTATCTGCAGGGGTCACGG +
Preference number: 4 (lower is better)
Translates to: QATPWEVRGAKWSPAVAERIKDR*YLQGSR
Trigger: CCGTGACCCCTGCAGATAGCACCGGTCTTTGATCCG...TTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp AGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGATGGAACTGGTGCTCTaGCTGCGAGTACACGGTTCC +
Preference number: 4 (lower is better)
Translates to: RSQVEPSSGRSSRAGTCGMELVL*LRVHGS
Trigger: GGAACCGTGTACTCGCAGCCAGAGCACCAGTTCCAT...CCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CCA 90 bp GTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTCACGGCGGCGGGGTCAGACAGGATaGCCCACTTGTGATGGAACT +
Preference number: 4 (lower is better)
Translates to: VWPLLRIKDRCYLQGSRRRGQTG*PTCDGT
Trigger: AGTTCCATCACAAGTGGGCCATCCTGTCTGACCCCG...CCGCCGTGACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CCA 90 bp CCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCGTCTCATTGGCCTTGTaGGGCGTCTTGATGTTGTCC +
Preference number: 4 (lower is better)
Translates to: PTGRTGDPLGSERSQVEPVSLAL*GVLMLS
Trigger: GGACAACATCAAGACGCCCCACAAGGCCAATGAGAC...GGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CCA 90 bp GCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCAGGGCTCCCGGTCAAGCCTaGTGCGGGATGAGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: APQGRWERVQATERKCGRAPGQA*CGMSGP
Trigger: AGGGCCACTCATCCCGCACCAGGCTTGACCGGGAGC...CCTGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCATTCTGCAGGAAGTTCTaGCACAGCCTCAGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: GRLGPRHEEWTLGSSGSPFCRKF*HSLSLS
Trigger: GGACAAGCTGAGGCTGTGCCAGAACTTCCTGCAGAA...TGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp AGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTAGAAGAGCAGGTCCTTaGAGGGCACACGGGCATAGG +
Preference number: 4 (lower is better)
Translates to: SERSQVEPSSGRSSRAGTRRAGP*RAHGHR
Trigger: CCTATGCCCGTGTGCCCTCCAAGGACCTGCTCTTCT...AGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp TGGGCAGGGTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTAGAAGAGCAGGTCCTTaGAGGGCACACGGGCATAGG +
Preference number: 4 (lower is better)
Translates to: WAGSGPCCGSKTGAICRGRRAGP*RAHGHR
Trigger: CCTATGCCCGTGTGCCCTCCAAGGACCTGCTCTTCT...ACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGACCCTGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp TGGGCAGGGTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTGAAGCCCCGCTTCCCTaGCAGCTTAAGGAAGAGCGT +
Preference number: 4 (lower is better)
Translates to: WAGSGPCCGSKTGAICRGEAPLP*QLKEER
Trigger: ACGCTCTTCCTTAAGCTGCCAGGGAAGCGGGGCTTC...ACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGACCCTGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCAGGGCTGCCTTGACCTCCTaGAAGCCACAGGGCAGGCCG +
Preference number: 4 (lower is better)
Translates to: APQGRWERVQATERKCGRAALTS*KPQGRP
Trigger: CGGCCTGCCCTGTGGCTTCCAGGAGGTCAAGGCAGC...CCTGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp TCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCAGGGGAGAGCATCTGGTCCCAGGTaGGACACAGGGTCTCATTCA +
Preference number: 4 (lower is better)
Translates to: SAQGMKSGRWAPQAPQGRASGPR*DTGSHS
Trigger: TGAATGAGACCCTGTGTCCCACCTGGGACCAGATGC...TCTCCCCTGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTTCGAACACCAGCATCTaGTCCCAGGTGGGACACAGG +
Preference number: 4 (lower is better)
Translates to: ERSQVEPSSGRSSRAGTCSNTSI*SQVGHR
Trigger: CCTGTGTCCCACCTGGGACCAGATGCTGGTGTTCGA...ACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCAGGAGGTGGGAAGCGGGGTaGGCAGTACGCCTCGTCTGC +
Preference number: 4 (lower is better)
Translates to: APQGRWERVQATERKCGRRWEAG*AVRLVC
Trigger: GCAGACGAGGCGTACTGCCCACCCCGCTTCCCACCT...CCTGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCAGGCGTGGCCGGTCCACCTaGGCCAGGTTCACCCGCTTT +
Preference number: 4 (lower is better)
Translates to: APQGRWERVQATERKCGRRGRST*ARFTRF
Trigger: AAAGCGGGTGAACCTGGCCCAGGTGGACCGGCCACG...CCTGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp CTGTTTGGACACACAATCAAGCTCAGCCCCCGACAGTCACATGCCAAAGGAGGCCCGTGGTGTTCCAGCTaGGGGCCGAGCGGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: LFGHTIKLSPRQSHAKGGPWCSS*GPSGLG
Trigger: CCCCAGACCGCTCGGCCCCCAGCTGGAACACCACGG...GCCTCCTTTGGCATGTGACTGTCGGGGGCTGAGCTTGATTGTGTGTCCAAACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426958.1
CDS-3UTR CCA 90 bp TGGAAACCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGCAGCATGCTCTCGTCTaGCTCCTCCTCCTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: WKPTGRTGDPLGSERSQVQHALV*LLLLWL
Trigger: GAGCCAGAGGAGGAGGAGCCAGACGAGAGCATGCTG...CACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGGTTTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp TGGAAACCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGTGCGCTCCTCCTCGGTaGAGCCATCCTCATCATCCC +
Preference number: 4 (lower is better)
Translates to: WKPTGRTGDPLGSERSQVCAPPR*SHPHHP
Trigger: GGGATGATGAGGATGGCTCCACCGAGGAGGAGCGCA...CACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGGTTTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTCACGGCGGCACGTCCTCTGGGAGTaGCACTTTGTACACGCAGAG +
Preference number: 4 (lower is better)
Translates to: VWPLLRIKDRCYLQGSRRHVLWE*HFVHAE
Trigger: CTCTGCGTGTACAAAGTGCCACTCCCAGAGGACGTG...CCGCCGTGACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp AGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGCACGTCCTCTGGGAGTaGCACTTTGTACACGCAGAG +
Preference number: 4 (lower is better)
Translates to: RSQVEPSSGRSSRAGTCGHVLWE*HFVHAE
Trigger: CTCTGCGTGTACAAAGTGCCACTCCCAGAGGACGTG...CCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp CCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCTCAGCATGGATTCCATaGGGAAGGAGGCCTCGATGT +
Preference number: 4 (lower is better)
Translates to: PTGRTGDPLGSERSQVEPSAWIP*GRRPRC
Trigger: ACATCGAGGCCTCCTTCCCCATGGAATCCATGCTGA...GGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp AGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGTCTGGCTGGGCTTCATaGGGTCCCGCCAGATATTGT +
Preference number: 4 (lower is better)
Translates to: RSQVEPSSGRSSRAGTCGSGWAS*GPARYC
Trigger: ACAATATCTGGCGGGACCCCATGAAGCCCAGCCAGA...CCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp TCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCAGGGGAGATCTGGCTGGGCTTCATaGGGTCCCGCCAGATATTGT +
Preference number: 4 (lower is better)
Translates to: SAQGMKSGRWAPQAPQGRSGWAS*GPARYC
Trigger: ACAATATCTGGCGGGACCCCATGAAGCCCAGCCAGA...TCTCCCCTGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCAGGGGGTCAGGATCTGGCTaGGCTTCATGGGGTCCCGCC +
Preference number: 4 (lower is better)
Translates to: APQGRWERVQATERKCGRGSGSG*ASWGPA
Trigger: GGCGGGACCCCATGAAGCCCAGCCAGATCCTGACCC...CCTGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp TCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCAGGGGAGACCACATGCTCGTCTGTaGGCTTCCTCTGACCGTTCT +
Preference number: 4 (lower is better)
Translates to: SAQGMKSGRWAPQAPQGRPHARL*ASSDRS
Trigger: AGAACGGTCAGAGGAAGCCCACAGACGAGCATGTGG...TCTCCCCTGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp CCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCGCAGCTCGTACTTCTTaGGCTTCCGAGGTGAGATGT +
Preference number: 4 (lower is better)
Translates to: PTGRTGDPLGSERSQVEPAARTS*ASEVRC
Trigger: ACATCTCACCTCGGAAGCCCAAGAAGTACGAGCTGC...GGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp TGGGCAGGGTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTCGGTGGCCATCTCCATaGTGCACTGCTTGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: WAGSGPCCGSKTGAICRGRWPSP*CTAWLS
Trigger: AGACAGCCAAGCAGTGCACCATGGAGATGGCCACCG...ACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGACCCTGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGCTCCCCAGGGGAGATaGGAAAGAGTCCAAGCCACT +
Preference number: 4 (lower is better)
Translates to: ERSQVEPSSGRSSRAGTCAPQGR*ERVQAT
Trigger: AGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGC...ACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp AGGCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCAGGGCCTGAAGAAGGGTaGCGCCTCAGCCAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: RLPRGDGKESKPLKGNAAGPEEG*RLSQVG
Trigger: CCCCACCTGGCTGAGGCGCCACCCTTCTTCAGGCCC...TGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp AGGAAGAGCCCCAACATGAGCAGCCCCAACAGCGCCAGCACGATCTTGATGATGGGGCCTGAAGAAGGGTaGCGCCTCAGCCAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: RKSPNMSSPNSASTILMMGPEEG*RLSQVG
Trigger: CCCCACCTGGCTGAGGCGCCACCCTTCTTCAGGCCC...CATCATCAAGATCGTGCTGGCGCTGTTGGGGCTGCTCATGTTGGGGCTCTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
CDS-3UTR CCA 90 bp GTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTCACGGCGGTCAGGAGTCTTCCTCTaGAGCCTGGGCCTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: VWPLLRIKDRCYLQGSRRSGVFL*SLGLKK
Trigger: CTTCTTCAGGCCCAGGCTCCAGAGGAAGACTCCTGA...CCGCCGTGACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCAGGAGGGTGTGCCCGGGATaGGGAGTCCCCTCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: APQGRWERVQATERKCGRRVCPG*GVPSAA
Trigger: AGCAGCAGAGGGGACTCCCCATCCCGGGCACACCCT...CCTGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGCTTCTTCCTCATGATCTaGGAGCTCTCGCTAGGGCCA +
Preference number: 4 (lower is better)
Translates to: GAKWSPAVAEAAALGLVGFFLMI*ELSLGP
Trigger: TGGCCCTAGCGAGAGCTCCCAGATCATGAGGAAGAA...GCCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338581.10
ENST00000339598.8
CDS-3UTR TCA 90 bp AGGAAGAGCCCCAACATGAGCAGCCCCAACAGCGCCAGCACGATCTTGATGATGGTGCCGTCAGTGGCCTaGTACCGGACCTCCACGCAC +
Preference number: 4 (lower is better)
Translates to: RKSPNMSSPNSASTILMMVPSVA*YRTSTH
Trigger: GTGCGTGGAGGTCCGGTATCAGGCCACTGACGGCAC...CATCATCAAGATCGTGCTGGCGCTGTTGGGGCTGCTCATGTTGGGGCTCTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272371.7
CDS-3UTR TCA 90 bp AGGAAGAGCCCCAACATGAGCAGCCCCAACAGCGCCAGCACGATCTTGATGATGCCACTCGGTACTTGCTaGGCACGGGCCGGATGCCCA +
Preference number: 4 (lower is better)
Translates to: RKSPNMSSPNSASTILMMPLGTC*ARAGCP
Trigger: TGGGCATCCGGCCCGTGCTCAGCAAGTACCGAGTGG...CATCATCAAGATCGTGCTGGCGCTGTTGGGGCTGCTCATGTTGGGGCTCTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
CDS-3UTR TCA 90 bp TCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCAGGGGAGACAGCCACATCCACCTTaGCAACAGCTTCAGAAGTCG +
Preference number: 4 (lower is better)
Translates to: SAQGMKSGRWAPQAPQGRQPHPP*QQLQKS
Trigger: CGACTTCTGAAGCTGTTGTCAAGGTGGATGTGGCTG...TCTCCCCTGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp CAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAATGCCCCGAAGCAAGTTaGAAGTGTGCAGCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: QATPWEVRGAKWSPAVAECPEAS*KCAASP
Trigger: AGGACTGGCTGCACACTTTCAACTTGCTTCGGGGCA...TTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp GTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTCACGGCGGTCTTGGTTTCCCCAATaGGGTCATCAGTGCCCACCA +
Preference number: 4 (lower is better)
Translates to: VWPLLRIKDRCYLQGSRRSWFPQ*GHQCPP
Trigger: TGGTGGGCACTGATGACCTCATTGGGGAAACCAAGA...CCGCCGTGACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp CAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAATGGACTTCTCCCCTGTaGAGAAGTCGTCGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: QATPWEVRGAKWSPAVAEWTSPL*RSRRPP
Trigger: TGGAGGACGACGACTTCTTCACAGGGGAGAAGTCCA...TTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp AGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTACTCCTTCTTGGAGATaGCGATCTTCTCCTCCGCCG +
Preference number: 4 (lower is better)
Translates to: SERSQVEPSSGRSSRAGTTPSWR*RSSPPP
Trigger: CGGCGGAGGAGAAGATCGTCATCTCCAAGAAGGAGT...AGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp TGGAAACCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGCCCCAAGGAGCTTTTTaGCCATGTAGCCAGGGAGGC +
Preference number: 4 (lower is better)
Translates to: WKPTGRTGDPLGSERSQVPQGAF*PCSQGG
Trigger: GCCTCCCTGGCTACATGGTCAAAAAGCTCCTTGGGG...CACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGGTTTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp GAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTAAGAGTCCAAGCCACTaGAAGGAAATGCGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: ERSQVEPSSGRSSRAGTCKSPSH*KEMRQG
Trigger: GCCCTGCCGCATTTCCTTTCAGTGGCTTGGACTCTT...ACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp AGGAAGAGCCCCAACATGAGCAGCCCCAACAGCGCCAGCACGATCTTGATGATGTCTGGAGCCTGGGCCTaGAGAAGGGTGGCGCCTCAG +
Preference number: 4 (lower is better)
Translates to: RKSPNMSSPNSASTILMMSGAWA*RRVAPQ
Trigger: CTGAGGCGCCACCCTTCTTCAGGCCCAGGCTCCAGA...CATCATCAAGATCGTGCTGGCGCTGTTGGGGCTGCTCATGTTGGGGCTCTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
CDS-3UTR TCA 90 bp AGGCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCATCTGGAGCCTGGGCCTaGAGAAGGGTGGCGCCTCAG +
Preference number: 4 (lower is better)
Translates to: RLPRGDGKESKPLKGNAASGAWA*RRVAPQ
Trigger: CTGAGGCGCCACCCTTCTTCAGGCCCAGGCTCCAGA...TGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp GCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCAGGGCCACCTCTGGGCTGTaGGTCTGTGGCTCTGGTGAG +
Preference number: 4 (lower is better)
Translates to: APQGRWERVQATERKCGRATSGL*VCGSGE
Trigger: CTCACCAGAGCCACAGACTCACAGCCCAGAGGTGGC...CCTGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
CDS-3UTR TCA 90 bp CAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAATCGCTAGGGCCATCCTaGGTATCGGTCATCATGAGG +
Preference number: 4 (lower is better)
Translates to: QATPWEVRGAKWSPAVAESLGPS*VSVIMR
Trigger: CCTCATGATGACCGATACTCAGGATGGCCCTAGCGA...TTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
CDS-3UTR GCA 90 bp GTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTCACGGCGGTGTGAGACCGGTTTTTaGCGAGCTTCATGGCGGAGA +
Preference number: 4 (lower is better)
Translates to: VWPLLRIKDRCYLQGSRRCETGF*RASWRR
Trigger: TCTCCGCCATGAAGCTCGGCAAAAACCGGTCTCACA...CCGCCGTGACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR GCA 90 bp TCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCAGGGGAGATCCGAGTCTCGGATCTaGACCTTCATGCGTTTGCAG +
Preference number: 4 (lower is better)
Translates to: SAQGMKSGRWAPQAPQGRSESRI*TFMRLQ
Trigger: CTGCAAACGCATGAAGGTGCAGATCCGAGACTCGGA...TCTCCCCTGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR GCA 90 bp GGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGCGGCCTCGTCATCACTTaGGTTCTGAATCAGGTCTAC +
Preference number: 4 (lower is better)
Translates to: GAKWSPAVAEAAALGLVGGLVIT*VLNQVY
Trigger: GTAGACCTGATTCAGAACGCAAGTGATGACGAGGCC...GCCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR GCA 90 bp AGGCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCACCCGGTCAAGCCTGGTaGGGGATGAGTGGCCCTGGT +
Preference number: 4 (lower is better)
Translates to: RLPRGDGKESKPLKGNAAPGQAW*GMSGPG
Trigger: ACCAGGGCCACTCATCCCGCACCAGGCTTGACCGGG...TGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp ATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTGTTGTCCCGCACCGTGTaGCGCTTCACCTGGGCCCGC +
Preference number: 4 (lower is better)
Translates to: ILYLEDLGRVSGVFLWSLLSRTV*RFTWAR
Trigger: GCGGGCCCAGGTGAAGCGGCACACGGTGCGGGACAA...CAGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTAGGAAGCGCAGCTTCTaGAGGAAGTTCTGGCACAGC +
Preference number: 4 (lower is better)
Translates to: ERSQVEPSSGRSSRAGTCRKRSF*RKFWHS
Trigger: GCTGTGCCAGAACTTCCTGCAGAAGCTGCGCTTCCT...ACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp AGGAAGAGCCCCAACATGAGCAGCCCCAACAGCGCCAGCACGATCTTGATGATGCGGCGGCAAAGAGGCTaGGGGCCTGGTACATGTGCG +
Preference number: 4 (lower is better)
Translates to: RKSPNMSSPNSASTILMMRRQRG*GPGTCA
Trigger: CGCACATGTACCAGGCCCGCAGCCTCTTTGCCGCCG...CATCATCAAGATCGTGCTGGCGCTGTTGGGGCTGCTCATGTTGGGGCTCTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
CDS-3UTR GCA 90 bp TGGAAACCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGATGTTCAAGGGCGGGTaGAGCAGCTCGTTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: WKPTGRTGDPLGSERSQVMFKGG*SSSFSG
Trigger: CCCAGAGAACGAGCTGCTGCACCCGCCCTTGAACAT...CACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGGTTTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GGGCAGCACTTGACGGGCCAGCTCCCAGCTGCAGCTGAAAGGGCTGGAAGGGCACTCTTTGGCAGCCCTTaGCTTCTCCTTGCCCTTCAT +
Preference number: 4 (lower is better)
Translates to: GQHLTGQLPAAAERAGRALFGSP*LLLALH
Trigger: ATGAAGGGCAAGGAGAAGGCAAGGGCTGCCAAAGAG...TGCCCTTCCAGCCCTTTCAGCTGCAGCTGGGAGCTGGCCCGTCAAGTGCTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp AGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTCCACTTTGCCGTCTTTaGAGAGGCGGGTCAGGATCT +
Preference number: 4 (lower is better)
Translates to: SERSQVEPSSGRSSRAGTPLCRL*RGGSGS
Trigger: AGATCCTGACCCGCCTCTGCAAAGACGGCAAAGTGG...AGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp CAACATGAGCAGCCCCAACAGCGCCAGCACGATCTTGATGATGAGCCACTTGTACACCAGGCGGCAGCCTaGGCGGGGGATGTCCTCCCA +
Preference number: 4 (lower is better)
Translates to: QHEQPQQRQHDLDDEPLVHQAAA*AGDVLP
Trigger: TGGGAGGACATCCCCCGCGCAGGCTGCCGCCTGGTG...TACAAGTGGCTCATCATCAAGATCGTGCTGGCGCTGTTGGGGCTGCTCATGTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
CDS-3UTR GCA 90 bp AGGAAGAGCCCCAACATGAGCAGCCCCAACAGCGCCAGCACGATCTTGATGATGGGCCTCGTCTCCACATaGTCTGGCACCAGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: RKSPNMSSPNSASTILMMGLVST*SGTRRQ
Trigger: CTGCCGCCTGGTGCCAGAGCATGTGGAGACGAGGCC...CATCATCAAGATCGTGCTGGCGCTGTTGGGGCTGCTCATGTTGGGGCTCTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
CDS-3UTR GCA 90 bp TGGGCAGGGTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTATCTCCATGGTGCACTaGTTGGCTGTCTTTGCGCCC +
Preference number: 4 (lower is better)
Translates to: WAGSGPCCGSKTGAICRGISMVH*LAVFAP
Trigger: GGGCGCAAAGACAGCCAAGCAGTGCACCATGGAGAT...ACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGACCCTGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp CAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAAGCTGGCGGCCTTCATaGCCCAAGGAGCTTTTTGAC +
Preference number: 4 (lower is better)
Translates to: QATPWEVRGAKWSPAVAESWRPS*PKELFD
Trigger: GTCAAAAAGCTCCTTGGGGCATGAAGGCCGCCAGCT...TTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTAGCTGGCGGCCTTCATaGCCCAAGGAGCTTTTTGAC +
Preference number: 4 (lower is better)
Translates to: ERSQVEPSSGRSSRAGTCSWRPS*PKELFD
Trigger: GTCAAAAAGCTCCTTGGGGCATGAAGGCCGCCAGCT...ACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp TGGAAACCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGCGGATCAAAGACCGGTaGTATCTGCAGGGGTCACGG +
Preference number: 4 (lower is better)
Translates to: WKPTGRTGDPLGSERSQVRIKDR*YLQGSR
Trigger: CCGTGACCCCTGCAGATAGCACCGGTCTTTGATCCG...CACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGGTTTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GGGCAGCACTTGACGGGCCAGCTCCCAGCTGCAGCTGAAAGGGCTGGAAGGGCAGAGACTGTCTTGAGGTaGATGAGCAAGGCCATGCTG +
Preference number: 4 (lower is better)
Translates to: GQHLTGQLPAAAERAGRAETVLR*MSKAML
Trigger: CAGCATGGCCTTGCTCATCCACCTCAAGACAGTCTC...TGCCCTTCCAGCCCTTTCAGCTGCAGCTGGGAGCTGGCCCGTCAAGTGCTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CCA 90 bp ATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTGGAAGCTCTTCTCTCCTaGGGGCCGGGAGCTGGGCCG +
Preference number: 4 (lower is better)
Translates to: ILYLEDLGRVSGVFLWSLEALLS*GPGAGP
Trigger: CGGCCCAGCTCCCGGCCCCCAGGAGAGAAGAGCTTC...CAGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CCA 90 bp GTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTCACGGCGGAGCCGAATGGCCAGATaGTCAAGGTCTTCCATCTCC +
Preference number: 4 (lower is better)
Translates to: VWPLLRIKDRCYLQGSRRSRMAR*SRSSIS
Trigger: GGAGATGGAAGACCTTGACCATCTGGCCATTCGGCT...CCGCCGTGACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CCA 90 bp GAGGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCATCTCCTAGCCGAATaGCCAGATGGTCAAGGTCTT +
Preference number: 4 (lower is better)
Translates to: EAGSAQGMKSGRWAPQAPHLLAE*PDGQGL
Trigger: AAGACCTTGACCATCTGGCCATTCGGCTAGGAGATG...GGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CCA 90 bp GGGCAGCACTTGACGGGCCAGCTCCCAGCTGCAGCTGAAAGGGCTGGAAGGGCAGTCTCATTGGCCTTGTaGGGCGTCTTGATGTTGTCC +
Preference number: 4 (lower is better)
Translates to: GQHLTGQLPAAAERAGRAVSLAL*GVLMLS
Trigger: GGACAACATCAAGACGCCCCACAAGGCCAATGAGAC...TGCCCTTCCAGCCCTTTCAGCTGCAGCTGGGAGCTGGCCCGTCAAGTGCTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CCA 90 bp CCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCGAAGTCTTGCCCTTCTaGCCAGCAAAGAAGACTTGC +
Preference number: 4 (lower is better)
Translates to: PTGRTGDPLGSERSQVEPEVLPF*PAKKTC
Trigger: GCAAGTCTTCTTTGCTGGCCAGAAGGGCAAGACTTC...GGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CCA 90 bp GGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGCCATGCGTTTGCAGAGTaGGGGGAAGAGGTCTGTAAA +
Preference number: 4 (lower is better)
Translates to: GAKWSPAVAEAAALGLVGHAFAE*GEEVCK
Trigger: TTTACAGACCTCTTCCCCCCACTCTGCAAACGCATG...GCCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CCA 90 bp GTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTCACGGCGGGCGTGTAGTTACGTGTaGAGCCGTACATGTTCACCC +
Preference number: 4 (lower is better)
Translates to: VWPLLRIKDRCYLQGSRRACSYV*SRTCSP
Trigger: GGGTGAACATGTACGGCTCCACACGTAACTACACGC...CCGCCGTGACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CCA 90 bp GCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCAGGTCTCCGAGATGGGCGTaGCCTGCTCCACCTGCACCT +
Preference number: 4 (lower is better)
Translates to: APQGRWERVQATERKCGRSPRWA*PAPPAP
Trigger: AGGTGCAGGTGGAGCAGGCCACGCCCATCTCGGAGA...CCTGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CCA 90 bp GCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCAGGCGGGATGAGTGGCCCTaGTCCTTGTCAGCGAGGGAG +
Preference number: 4 (lower is better)
Translates to: APQGRWERVQATERKCGRRDEWP*SLSARE
Trigger: CTCCCTCGCTGACAAGGACCAGGGCCACTCATCCCG...CCTGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCAGGCTGGTGCGGGATGAGTaGCCCTGGTCCTTGTCAGCG +
Preference number: 4 (lower is better)
Translates to: APQGRWERVQATERKCGRLVRDE*PWSLSA
Trigger: CGCTGACAAGGACCAGGGCCACTCATCCCGCACCAG...CCTGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp TGGAAACCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAAGCCCCGCTTCCCTaGCAGCTTAAGGAAGAGCGT +
Preference number: 4 (lower is better)
Translates to: WKPTGRTGDPLGSERSQVEAPLP*QLKEER
Trigger: ACGCTCTTCCTTAAGCTGCCAGGGAAGCGGGGCTTC...CACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGGTTTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp AGGAAGAGCCCCAACATGAGCAGCCCCAACAGCGCCAGCACGATCTTGATGATGGACCAGGCTGACGGGTaGGAAGGCATGCAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: RKSPNMSSPNSASTILMMDQADG*EGMQAQ
Trigger: CTGGGCCTGCATGCCTTCCCACCCGTCAGCCTGGTC...CATCATCAAGATCGTGCTGGCGCTGTTGGGGCTGCTCATGTTGGGGCTCTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
CDS-3UTR CCA 90 bp GGGAGCTGTTTGGACACACAATCAAGCTCAGCCCCCGACAGTCACATGCCAAAGCTCGATGTCCACCCGTaGCCGGTCCACCTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: GSCLDTQSSSAPDSHMPKLDVHP*PVHLGQ
Trigger: CTGGCCCAGGTGGACCGGCCACGGGTGGACATCGAG...CTTTGGCATGTGACTGTCGGGGGCTGAGCTTGATTGTGTGTCCAAACAGCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426958.1
CDS-3UTR CCA 90 bp TCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCAGGGGAGACAGCAGCTCGTTCTCTaGGAGGTCCACTTCAAACCA +
Preference number: 4 (lower is better)
Translates to: SAQGMKSGRWAPQAPQGRQQLVL*EVHFKP
Trigger: TGGTTTGAAGTGGACCTCCCAGAGAACGAGCTGCTG...TCTCCCCTGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp AATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTCCGTGGTGTTCCAGCTaGGGGCCGAGCGGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: NPVLGRPGEGFRSLPLEPPWCSS*GPSGLG
Trigger: CCCCAGACCGCTCGGCCCCCAGCTGGAACACCACGG...AGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp TGGAAACCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGCCGGGACACGTCCTCTaGGAGTGGCACTTTGTACAC +
Preference number: 4 (lower is better)
Translates to: WKPTGRTGDPLGSERSQVPGHVL*EWHFVH
Trigger: GTGTACAAAGTGCCACTCCCAGAGGACGTGTCCCGG...CACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGGTTTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp CAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAATCTTGCCTAGCCGGATaGCGATGTAGGGGTCAGCTT +
Preference number: 4 (lower is better)
Translates to: QATPWEVRGAKWSPAVAESCLAG*RCRGQL
Trigger: AAGCTGACCCCTACATCGCCATCCGGCTAGGCAAGA...TTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp AGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTCTTGCCTAGCCGGATaGCGATGTAGGGGTCAGCTT +
Preference number: 4 (lower is better)
Translates to: SERSQVEPSSGRSSRAGTSCLAG*RCRGQL
Trigger: AAGCTGACCCCTACATCGCCATCCGGCTAGGCAAGA...AGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp TCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCAGGGGAGATCAGCATGGATTCCATaGGGAAGGAGGCCTCGATGT +
Preference number: 4 (lower is better)
Translates to: SAQGMKSGRWAPQAPQGRSAWIP*GRRPRC
Trigger: ACATCGAGGCCTCCTTCCCCATGGAATCCATGCTGA...TCTCCCCTGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp TGGAAACCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGCAGCCACCGTCAGCATaGATTCCATGGGGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: WKPTGRTGDPLGSERSQVQPPSA*IPWGRR
Trigger: CCTCCTTCCCCATGGAATCCATGCTGACGGTGGCTG...CACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGGTTTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp CCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCTATTGTAGCCATGTGTaGAGTAGGTCTGGGCGATGC +
Preference number: 4 (lower is better)
Translates to: PTGRTGDPLGSERSQVEPYCSHV*SRSGRC
Trigger: GCATCGCCCAGACCTACTCCACACATGGCTACAATA...GGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp ATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTGCCAGGGGGCCCAAAGTaGGGGCCGTCCACTTTGCCG +
Preference number: 4 (lower is better)
Translates to: ILYLEDLGRVSGVFLWSLPGGPK*GPSTLP
Trigger: CGGCAAAGTGGACGGCCCCCACTTTGGGCCCCCTGG...CAGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTCCACATGCTCGTCTGTaGGCTTCCTCTGACCGTTCT +
Preference number: 4 (lower is better)
Translates to: ERSQVEPSSGRSSRAGTCPHARL*ASSDRS
Trigger: AGAACGGTCAGAGGAAGCCCACAGACGAGCATGTGG...ACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp CAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAACCACATGCTCGTCTGTaGGCTTCCTCTGACCGTTCT +
Preference number: 4 (lower is better)
Translates to: QATPWEVRGAKWSPAVAEPHARL*ASSDRS
Trigger: AGAACGGTCAGAGGAAGCCCACAGACGAGCATGTGG...TTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp TGGGCAGGGTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTCCACATGCTCGTCTGTaGGCTTCCTCTGACCGTTCT +
Preference number: 4 (lower is better)
Translates to: WAGSGPCCGSKTGAICRGPHARL*ASSDRS
Trigger: AGAACGGTCAGAGGAAGCCCACAGACGAGCATGTGG...ACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGACCCTGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp AGGAAGAGCCCCAACATGAGCAGCCCCAACAGCGCCAGCACGATCTTGATGATGCGTCTCCACATGCTCTaGCACCAGGCGGCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: RKSPNMSSPNSASTILMMRLHML*HQAAAC
Trigger: GCAGGCTGCCGCCTGGTGCCAGAGCATGTGGAGACG...CATCATCAAGATCGTGCTGGCGCTGTTGGGGCTGCTCATGTTGGGGCTCTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
CDS-3UTR CCA 90 bp AGGCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCACGTCTCCACATGCTCTaGCACCAGGCGGCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: RLPRGDGKESKPLKGNAARLHML*HQAAAC
Trigger: GCAGGCTGCCGCCTGGTGCCAGAGCATGTGGAGACG...TGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCAGGGGCGCCTCAGCCAGGTaGGGCAAGAGAGACCCATTC +
Preference number: 4 (lower is better)
Translates to: APQGRWERVQATERKCGRGASAR*GKRDPF
Trigger: GAATGGGTCTCTCTTGCCCCACCTGGCTGAGGCGCC...CCTGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp AGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTCAGGAGTCTTCCTCTaGAGCCTGGGCCTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: SERSQVEPSSGRSSRAGTSGVFL*SLGLKK
Trigger: CTTCTTCAGGCCCAGGCTCCAGAGGAAGACTCCTGA...AGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp CCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCTGTACTTGGAAGACCTaGGGAGGGTTTCAGGAGTCT +
Preference number: 4 (lower is better)
Translates to: PTGRTGDPLGSERSQVEPCTWKT*GGFQES
Trigger: AGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACA...GGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp AGGAAGAGCCCCAACATGAGCAGCCCCAACAGCGCCAGCACGATCTTGATGATGAGTGGAGCCCAGCAGTaGCAGAAGCAGCCGCGCTGG +
Preference number: 4 (lower is better)
Translates to: RKSPNMSSPNSASTILMMSGAQQ*QKQPRW
Trigger: CCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACT...CATCATCAAGATCGTGCTGGCGCTGTTGGGGCTGCTCATGTTGGGGCTCTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
CDS-3UTR CCA 90 bp TCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCAGGGGAGATTCTTCCTCATGATCTaGGAGCTCTCGCTAGGGCCA +
Preference number: 4 (lower is better)
Translates to: SAQGMKSGRWAPQAPQGRFFLMI*ELSLGP
Trigger: TGGCCCTAGCGAGAGCTCCCAGATCATGAGGAAGAA...TCTCCCCTGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338581.10
ENST00000339598.8
CDS-3UTR TCA 90 bp ATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTGCCCTCATGCAGGACTTaGGGCGCTCCCGGTCAAGCC +
Preference number: 4 (lower is better)
Translates to: ILYLEDLGRVSGVFLWSLPSCRT*GAPGQA
Trigger: GGCTTGACCGGGAGCGCCTCAAGTCCTGCATGAGGG...CAGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp GCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCAGGTGGTGTAGACCAGGCTaGCGGGTGGGAAGGCATGCA +
Preference number: 4 (lower is better)
Translates to: APQGRWERVQATERKCGRWCRPG*RVGRHA
Trigger: TGCATGCCTTCCCACCCGTCAGCCTGGTCTACACCA...CCTGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp AATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTGCGGGCAAAGGGGTCTaGGAGTCCGCTGCTGTCGGC +
Preference number: 4 (lower is better)
Translates to: NPVLGRPGEGFRSLPLEPAGKGV*ESAAVG
Trigger: GCCGACAGCAGCGGACTCTCAGACCCCTTTGCCCGC...AGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp AGGCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCACTTGGGCTTCCGAGGTaGGATGTCCAGAGGCGTCCC +
Preference number: 4 (lower is better)
Translates to: RLPRGDGKESKPLKGNAALGLPR*DVQRRP
Trigger: GGGACGCCTCTGGACATCTCACCTCGGAAGCCCAAG...TGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp GCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCAGGAGTTGCCCTCGCCAGTaGGGGAGTGGTAGTGGACGT +
Preference number: 4 (lower is better)
Translates to: APQGRWERVQATERKCGRSCPRQ*GSGSGR
Trigger: ACGTCCACTACCACTCCCTCACTGGCGAGGGCAACT...CCTGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp TGGAAACCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGAGTAGCGAGCCGACTTaGGAGGGTTCAGGAACCAGA +
Preference number: 4 (lower is better)
Translates to: WKPTGRTGDPLGSERSQVSSEPT*EGSGTR
Trigger: TCTGGTTCCTGAACCCTCTCAAGTCGGCTCGCTACT...CACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGGTTTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
CDS-3UTR TCA 90 bp ATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTGCGACCCCCTGGGAAGTaGGAGGAGCCAAGTGGAGCC +
Preference number: 4 (lower is better)
Translates to: ILYLEDLGRVSGVFLWSLRPPGK*EEPSGA
Trigger: GGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCG...CAGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp TGGAAACCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGTCGCTAGGGCCATCCTaGGTATCGGTCATCATGAGG +
Preference number: 4 (lower is better)
Translates to: WKPTGRTGDPLGSERSQVSLGPS*VSVIMR
Trigger: CCTCATGATGACCGATACTCAGGATGGCCCTAGCGA...CACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGGTTTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
CDS-3UTR GCA 90 bp AGGCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCACCCAGGAGCCCACTGTaGCGTCAGTGGCCTGATACC +
Preference number: 4 (lower is better)
Translates to: RLPRGDGKESKPLKGNAAPRSPL*RQWPDT
Trigger: GGTATCAGGCCACTGACGGCACAGTGGGCTCCTGGG...TGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR GCA 90 bp GAGGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCTTCTTCCATTTTACCTaGACAGCTCTCCGAGATGGG +
Preference number: 4 (lower is better)
Translates to: EAGSAQGMKSGRWAPQAPFFHFT*TALRDG
Trigger: CCCATCTCGGAGAGCTGTGCAGGTAAAATGGAAGAA...GGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR GCA 90 bp AGGCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCAATGTCGGGAATGCTGTaGTGGGGCTCGTCCGCCAGG +
Preference number: 4 (lower is better)
Translates to: RLPRGDGKESKPLKGNAAMSGML*WGSSAR
Trigger: CCTGGCGGACGAGCCCCAGCACAGCATTCCCGACAT...TGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCAGGTGGATCAGGGACGACTaGACCCCCTTCCCTGCACAC +
Preference number: 4 (lower is better)
Translates to: APQGRWERVQATERKCGRWIRDD*TPFPAH
Trigger: GTGTGCAGGGAAGGGGGTGCAGTCGTCCCTGATCCA...CCTGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTCTCTTTGGCAGCCCTTaGCTTCTCCTTGCCCTTCAT +
Preference number: 4 (lower is better)
Translates to: ERSQVEPSSGRSSRAGTCLFGSP*LLLALH
Trigger: ATGAAGGGCAAGGAGAAGGCAAGGGCTGCCAAAGAG...ACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp AGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTCTCTTTGGCAGCCCTTaGCTTCTCCTTGCCCTTCAT +
Preference number: 4 (lower is better)
Translates to: SERSQVEPSSGRSSRAGTLFGSP*LLLALH
Trigger: ATGAAGGGCAAGGAGAAGGCAAGGGCTGCCAAAGAG...AGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp TGGAAACCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGCCACTTTGCCGTCTTTaGAGAGGCGGGTCAGGATCT +
Preference number: 4 (lower is better)
Translates to: WKPTGRTGDPLGSERSQVPLCRL*RGGSGS
Trigger: AGATCCTGACCCGCCTCTGCAAAGACGGCAAAGTGG...CACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGGTTTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCAGGGCCAACAGCGCCACATaGTCGTCTGTGGGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: APQGRWERVQATERKCGRANSAT*SSVGFL
Trigger: GAGGAAGCCCACAGACGAGCATGTGGCGCTGTTGGC...CCTGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp ATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTGGGGATGTCCTCCCAGTaGCTCAGGGCCAACAGCGCC +
Preference number: 4 (lower is better)
Translates to: ILYLEDLGRVSGVFLWSLGMSSQ*LRANSA
Trigger: GGCGCTGTTGGCCCTGAGGCACTGGGAGGACATCCC...CAGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp CAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAATGGCCATCTCCATGGTaGACTGCTTGGCTGTCTTTG +
Preference number: 4 (lower is better)
Translates to: QATPWEVRGAKWSPAVAEWPSPW*TAWLSL
Trigger: CAAAGACAGCCAAGCAGTGCACCATGGAGATGGCCA...TTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp TGGGCAGGGTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTTGGCCATCTCCATGGTaGACTGCTTGGCTGTCTTTG +
Preference number: 4 (lower is better)
Translates to: WAGSGPCCGSKTGAICRGWPSPW*TAWLSL
Trigger: CAAAGACAGCCAAGCAGTGCACCATGGAGATGGCCA...ACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGACCCTGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GGGCAGCACTTGACGGGCCAGCTCCCAGCTGCAGCTGAAAGGGCTGGAAGGGCACCTTTGACGCGCTTTTaGTTGAAGATGGACACGAGG +
Preference number: 4 (lower is better)
Translates to: GQHLTGQLPAAAERAGRAPLTRF*LKMDTR
Trigger: CCTCGTGTCCATCTTCAAGCAAAAGCGCGTCAAAGG...TGCCCTTCCAGCCCTTTCAGCTGCAGCTGGGAGCTGGCCCGTCAAGTGCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTCACGGCGGCATCTCCTAGCCGAATaGCCAGATGGTCAAGGTCTT +
Preference number: 4 (lower is better)
Translates to: VWPLLRIKDRCYLQGSRRHLLAE*PDGQGL
Trigger: AAGACCTTGACCATCTGGCCATTCGGCTAGGAGATG...CCGCCGTGACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CCA 90 bp GGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCATGCGCAGCAGGTTCTTaGAGTGAATCACCGAAATCT +
Preference number: 4 (lower is better)
Translates to: GRLGPRHEEWTLGSSGSPCAAGS*SESPKS
Trigger: AGATTTCGGTGATTCACTCCAAGAACCTGCTGCGCA...TGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CCA 90 bp ATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTGGCTGCCTTGACCTCCTaGAAGCCACAGGGCAGGCCG +
Preference number: 4 (lower is better)
Translates to: ILYLEDLGRVSGVFLWSLAALTS*KPQGRP
Trigger: CGGCCTGCCCTGTGGCTTCCAGGAGGTCAAGGCAGC...CAGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp CAGGATAGTATTAGGAGGGAGCTGTTTGGACACACAATCAAGCTCAGCCCCCGAGGGGGCCGAGCGGTCTaGGGGCCGGTAGATGAAGCG +
Preference number: 4 (lower is better)
Translates to: QDSIRRELFGHTIKLSPRGGRAV*GPVDEA
Trigger: CGCTTCATCTACCGGCCCCCAGACCGCTCGGCCCCC...TCGGGGGCTGAGCTTGATTGTGTGTCCAAACAGCTCCCTCCTAATACTATCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000426958.1
CDS-3UTR CCA 90 bp GAGGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCCTTCATGGTGTCAATaGAGGCAAAGTACTTGGACC +
Preference number: 4 (lower is better)
Translates to: EAGSAQGMKSGRWAPQAPPSWCQ*RQSTWT
Trigger: GGTCCAAGTACTTTGCCTCCATTGACACCATGAAGG...GGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GGGCAGCACTTGACGGGCCAGCTCCCAGCTGCAGCTGAAAGGGCTGGAAGGGCATCTTCTTCTCCTCTTTaGCAGCCCTTGCCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: GQHLTGQLPAAAERAGRASSSPL*QPLPSP
Trigger: AGGAGAAGGCAAGGGCTGCCAAAGAGGAGAAGAAGA...TGCCCTTCCAGCCCTTTCAGCTGCAGCTGGGAGCTGGCCCGTCAAGTGCTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp AGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTCAGCATGGATTCCATaGGGAAGGAGGCCTCGATGT +
Preference number: 4 (lower is better)
Translates to: SERSQVEPSSGRSSRAGTSAWIP*GRRPRC
Trigger: ACATCGAGGCCTCCTTCCCCATGGAATCCATGCTGA...AGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp ATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTGGGGCGATGCCGCAGGTaGCGCGGTGCTTGCTGTAGA +
Preference number: 4 (lower is better)
Translates to: ILYLEDLGRVSGVFLWSLGRCRR*RGACCR
Trigger: TCTACAGCAAGCACCGCGCCACCTGCGGCATCGCCC...CAGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTCACGGCGGTATTGTAGCCATGTGTaGAGTAGGTCTGGGCGATGC +
Preference number: 4 (lower is better)
Translates to: VWPLLRIKDRCYLQGSRRYCSHV*SRSGRC
Trigger: GCATCGCCCAGACCTACTCCACACATGGCTACAATA...CCGCCGTGACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp TGGAAACCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGTCTGGCTGGGCTTCATaGGGTCCCGCCAGATATTGT +
Preference number: 4 (lower is better)
Translates to: WKPTGRTGDPLGSERSQVSGWAS*GPARYC
Trigger: ACAATATCTGGCGGGACCCCATGAAGCCCAGCCAGA...CACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGGTTTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp ATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTGGGGTCAGGATCTGGCTaGGCTTCATGGGGTCCCGCC +
Preference number: 4 (lower is better)
Translates to: ILYLEDLGRVSGVFLWSLGSGSG*ASWGPA
Trigger: GGCGGGACCCCATGAAGCCCAGCCAGATCCTGACCC...CAGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp AATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTGGGCCTGAAGAAGGGTaGCGCCTCAGCCAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: NPVLGRPGEGFRSLPLEPGPEEG*RLSQVG
Trigger: CCCCACCTGGCTGAGGCGCCACCCTTCTTCAGGCCC...AGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCACTTCAATCCTGTACTTaGAAGACCTGGGGAGGGTTT +
Preference number: 4 (lower is better)
Translates to: GRLGPRHEEWTLGSSGSPLQSCT*KTWGGF
Trigger: AAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAG...TGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp CCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCCTGGGCACTGACCCATaGTCCTTGGTTAATTTCACT +
Preference number: 4 (lower is better)
Translates to: PTGRTGDPLGSERSQVEPLGTDP*SLVNFT
Trigger: AGTGAAATTAACCAAGGACCATGGGTCAGTGCCCAG...GGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp AGGAAGAGCCCCAACATGAGCAGCCCCAACAGCGCCAGCACGATCTTGATGATGGGACAGGCGACCCCCTaGGAAGTGAGAGGAGCCAAG +
Preference number: 4 (lower is better)
Translates to: RKSPNMSSPNSASTILMMGQATP*EVRGAK
Trigger: CTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCC...CATCATCAAGATCGTGCTGGCGCTGTTGGGGCTGCTCATGTTGGGGCTCTTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
CDS-3UTR CCA 90 bp GCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCAGGGGGCAGAGGGAGCTCTaGGAAGCCATGGAAACCCAC +
Preference number: 4 (lower is better)
Translates to: APQGRWERVQATERKCGRGQREL*EAMETH
Trigger: GTGGGTTTCCATGGCTTCCCAGAGCTCCCTCTGCCC...CCTGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp CAACATGAGCAGCCCCAACAGCGCCAGCACGATCTTGATGATGAGCCACTTGTACCACAACCTCCCCCGTaGTGTTCCAGCTGGGGGCCG +
Preference number: 4 (lower is better)
Translates to: QHEQPQQRQHDLDDEPLVPQPPP*CSSWGP
Trigger: CGGCCCCCAGCTGGAACACCACGGGGGAGGTTGTGG...TACAAGTGGCTCATCATCAAGATCGTGCTGGCGCTGTTGGGGCTGCTCATGTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000338581.10
CDS-3UTR CCA 90 bp AATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTCCACAACCTCCCCCGTaGTGTTCCAGCTGGGGGCCG +
Preference number: 4 (lower is better)
Translates to: NPVLGRPGEGFRSLPLEPPQPPP*CSSWGP
Trigger: CGGCCCCCAGCTGGAACACCACGGGGGAGGTTGTGG...AGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000338581.10
ENST00000339598.8
CDS-3UTR CCA 90 bp GTATTAGGAGGGAGCTGTTTGGACACACAATCAAGCTCAGCCCCCGACAGTCACCCACAACCTCCCCCGTaGTGTTCCAGCTGGGGGCCG +
Preference number: 4 (lower is better)
Translates to: VLGGSCLDTQSSSAPDSHPQPPP*CSSWGP
Trigger: CGGCCCCCAGCTGGAACACCACGGGGGAGGTTGTGG...GTGACTGTCGGGGGCTGAGCTTGATTGTGTGTCCAAACAGCTCCCTCCTAATAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000426958.1
CDS-3UTR TCA 90 bp AGGAAGAGCCCCAACATGAGCAGCCCCAACAGCGCCAGCACGATCTTGATGATGAGTAGTTCCTGTCGGTaGCCTGGGGCCGCATTGGTG +
Preference number: 4 (lower is better)
Translates to: RKSPNMSSPNSASTILMMSSSCR*PGAALV
Trigger: CACCAATGCGGCCCCAGGTCACCGACAGGAACTACT...CATCATCAAGATCGTGCTGGCGCTGTTGGGGCTGCTCATGTTGGGGCTCTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000272371.7
CDS-3UTR TCA 90 bp GGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGCAGGACTTCTCCGTTTTaGTCATCTCCTGTATGTCGT +
Preference number: 4 (lower is better)
Translates to: GAKWSPAVAEAAALGLVGRTSPF*SSPVCR
Trigger: ACGACATACAGGAGATGATCAAAACGGAGAAGTCCT...GCCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp GAGGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCAGGACTTCTCCGTTTTaGTCATCTCCTGTATGTCGT +
Preference number: 4 (lower is better)
Translates to: EAGSAQGMKSGRWAPQAPRTSPF*SSPVCR
Trigger: ACGACATACAGGAGATGATCAAAACGGAGAAGTCCT...GGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp GGGCAGCACTTGACGGGCCAGCTCCCAGCTGCAGCTGAAAGGGCTGGAAGGGCATGCTCATCATCCAGATaGAGATGTCGGGAATGCTGT +
Preference number: 4 (lower is better)
Translates to: GQHLTGQLPAAAERAGRACSSSR*RCRECC
Trigger: ACAGCATTCCCGACATCTTCATCTGGATGATGAGCA...TGCCCTTCCAGCCCTTTCAGCTGCAGCTGGGAGCTGGCCCGTCAAGTGCTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp AATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTCCATGGGCACGGGCATaGTGGGACCTCGGTCCACGT +
Preference number: 4 (lower is better)
Translates to: NPVLGRPGEGFRSLPLEPPWARA*WDLGPR
Trigger: ACGTGGACCGAGGTCCCATCATGCCCGTGCCCATGG...AGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp AATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTCCACTCGGTACTTGCTaGGCACGGGCCGGATGCCCA +
Preference number: 4 (lower is better)
Translates to: NPVLGRPGEGFRSLPLEPPLGTC*ARAGCP
Trigger: TGGGCATCCGGCCCGTGCTCAGCAAGTACCGAGTGG...AGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp AGGCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCACTCCTTGCCCTTCATTaGCCCCTTCAGGCCCTCGGT +
Preference number: 4 (lower is better)
Translates to: RLPRGDGKESKPLKGNAALLALH*PLQALG
Trigger: ACCGAGGGCCTGAAGGGGTCAATGAAGGGCAAGGAG...TGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp TGGGCAGGGTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTCCAGAGCCAGAGCTCTaGGTTTTCTTCTTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: WAGSGPCCGSKTGAICRGPEPEL*VFFFFS
Trigger: GGAGAAGAAGAAGAAAACTCAGAGCTCTGGCTCTGG...ACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGACCCTGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp GCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCAGGGGTCAGCTTTGCCGTTaGTGTCAGCAGGGTGCAGGT +
Preference number: 4 (lower is better)
Translates to: APQGRWERVQATERKCGRGQLCR*CQQGAG
Trigger: ACCTGCACCCTGCTGACATCAACGGCAAAGCTGACC...CCTGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp AGGAAGAGCCCCAACATGAGCAGCCCCAACAGCGCCAGCACGATCTTGATGATGAGTTGCCCTCGCCAGTaGGGGAGTGGTAGTGGACGT +
Preference number: 4 (lower is better)
Translates to: RKSPNMSSPNSASTILMMSCPRQ*GSGSGR
Trigger: ACGTCCACTACCACTCCCTCACTGGCGAGGGCAACT...CATCATCAAGATCGTGCTGGCGCTGTTGGGGCTGCTCATGTTGGGGCTCTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
CDS-3UTR TCA 90 bp ATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTGGGAAGAGCCCCAACATaGGCAGCCCCAACAGCGCCA +
Preference number: 4 (lower is better)
Translates to: ILYLEDLGRVSGVFLWSLGRAPT*AAPTAP
Trigger: TGGCGCTGTTGGGGCTGCTCATGTTGGGGCTCTTCC...CAGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp ATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTGAGCTCCACCTTGGCCTaGACTGTCCAGCCTGCCGAG +
Preference number: 4 (lower is better)
Translates to: ILYLEDLGRVSGVFLWSLSSTLA*TVQPAE
Trigger: CTCGGCAGGCTGGACAGTGCAGGCCAAGGTGGAGCT...CAGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GGAGCTGTTTGGACACACAATCAAGCTCAGCCCCCGACAGTCACATGCCAAAGGCTGCACCCCCTTCCCTaGACACTCGATGTCCACCCG +
Preference number: 4 (lower is better)
Translates to: GAVWTHNQAQPPTVTCQRLHPLP*TLDVHP
Trigger: CGGGTGGACATCGAGTGTGCAGGGAAGGGGGTGCAG...CCTTTGGCATGTGACTGTCGGGGGCTGAGCTTGATTGTGTGTCCAAACAGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000426958.1
CDS-3UTR GCA 90 bp TGGAAACCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGCTCTTTGGCAGCCCTTaGCTTCTCCTTGCCCTTCAT +
Preference number: 4 (lower is better)
Translates to: WKPTGRTGDPLGSERSQVLFGSP*LLLALH
Trigger: ATGAAGGGCAAGGAGAAGGCAAGGGCTGCCAAAGAG...CACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGGTTTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp CAACATGAGCAGCCCCAACAGCGCCAGCACGATCTTGATGATGAGCCACTTGTAAGTAGGTCTGGGCGATaGCGCAGGTGGCGCGGTGCT +
Preference number: 4 (lower is better)
Translates to: QHEQPQQRQHDLDDEPLVSRSGR*RRWRGA
Trigger: AGCACCGCGCCACCTGCGGCATCGCCCAGACCTACT...TACAAGTGGCTCATCATCAAGATCGTGCTGGCGCTGTTGGGGCTGCTCATGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
CDS-3UTR GCA 90 bp AATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTGGCCTCGTCTCCACATaGTCTGGCACCAGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: NPVLGRPGEGFRSLPLEPGLVST*SGTRRQ
Trigger: CTGCCGCCTGGTGCCAGAGCATGTGGAGACGAGGCC...AGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp AGGCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCATGGACGTCTGTGTCCTaGTTGTCCTCCTGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: RLPRGDGKESKPLKGNAAWTSVS*LSSCWP
Trigger: GGGCCAGCAGGAGGACAAGCAGGACACAGACGTCCA...TGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTCCTTTGACGCGCTTTTaGTTGAAGATGGACACGAGG +
Preference number: 4 (lower is better)
Translates to: ERSQVEPSSGRSSRAGTCPLTRF*LKMDTR
Trigger: CCTCGTGTCCATCTTCAAGCAAAAGCGCGTCAAAGG...ACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp AGGCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCAACTCATCGTTCTCATTaGGGGCCAGGAGGGGCCACC +
Preference number: 4 (lower is better)
Translates to: RLPRGDGKESKPLKGNAATHRSH*GPGGAT
Trigger: GGTGGCCCCTCCTGGCCCGCAATGAGAACGATGAGT...TGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp AGGCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCAAAGACCGGTGCTATCTaGAGGGGTCACGGCGGGGAT +
Preference number: 4 (lower is better)
Translates to: RLPRGDGKESKPLKGNAAKTGAI*RGHGGD
Trigger: ATCCCCGCCGTGACCCCTGCAGATAGCACCGGTCTT...TGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp CAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGAAGTCTTGCCCTTCTaGCCAGCAAAGAAGACTTGC +
Preference number: 4 (lower is better)
Translates to: QATPWEVRGAKWSPAVAEEVLPF*PAKKTC
Trigger: GCAAGTCTTCTTTGCTGGCCAGAAGGGCAAGACTTC...TTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CCA 90 bp TCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCAGGGGAGAAGCTTGTCGGCAATGTaGTCCATGATGTTGGCATTG +
Preference number: 4 (lower is better)
Translates to: SAQGMKSGRWAPQAPQGRSLSAM*SMMLAL
Trigger: CAATGCCAACATCATGGACCACATTGCCGACAAGCT...TCTCCCCTGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CCA 90 bp ATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTGCTGGTGCGGGATGAGTaGCCCTGGTCCTTGTCAGCG +
Preference number: 4 (lower is better)
Translates to: ILYLEDLGRVSGVFLWSLLVRDE*PWSLSA
Trigger: CGCTGACAAGGACCAGGGCCACTCATCCCGCACCAG...CAGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp AATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTGCTCCCGGTCAAGCCTaGTGCGGGATGAGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: NPVLGRPGEGFRSLPLEPAPGQA*CGMSGP
Trigger: AGGGCCACTCATCCCGCACCAGGCTTGACCGGGAGC...AGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp ATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTGTCGGGAATGCTGTGCTaGGGCTCGTCCGCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: ILYLEDLGRVSGVFLWSLSGMLC*GSSARK
Trigger: CTTCCTGGCGGACGAGCCCCAGCACAGCATTCCCGA...CAGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCAGGGCAGGTCTCCAGCTGTaGCGTTGCCACGGTAGATCT +
Preference number: 4 (lower is better)
Translates to: APQGRWERVQATERKCGRAGLQL*RCHGRS
Trigger: AGATCTACCGTGGCAACGCCACAGCTGGAGACCTGC...CCTGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp TGGAAACCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGCAGCAGCTCGTTCTCTaGGAGGTCCACTTCAAACCA +
Preference number: 4 (lower is better)
Translates to: WKPTGRTGDPLGSERSQVQQLVL*EVHFKP
Trigger: TGGTTTGAAGTGGACCTCCCAGAGAACGAGCTGCTG...CACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGGTTTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp CCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCGAAGTTGCTCCTTCATaGTGTCAATGGAGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: PTGRTGDPLGSERSQVEPEVAPS*CQWRQS
Trigger: ACTTTGCCTCCATTGACACCATGAAGGAGCAACTTC...GGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp AGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTCTTCTTCTCCTCTTTaGCAGCCCTTGCCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: SERSQVEPSSGRSSRAGTSSSPL*QPLPSP
Trigger: AGGAGAAGGCAAGGGCTGCCAAAGAGGAGAAGAAGA...AGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp ATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTGCAGGGTGCAGGTCCGTaGCCCGGACCACATAGACTC +
Preference number: 4 (lower is better)
Translates to: ILYLEDLGRVSGVFLWSLQGAGP*PGPHRL
Trigger: GAGTCTATGTGGTCCGGGCCACGGACCTGCACCCTG...CAGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp CAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAATATTGTAGCCATGTGTaGAGTAGGTCTGGGCGATGC +
Preference number: 4 (lower is better)
Translates to: QATPWEVRGAKWSPAVAEYCSHV*SRSGRC
Trigger: GCATCGCCCAGACCTACTCCACACATGGCTACAATA...TTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp AGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTATTGTAGCCATGTGTaGAGTAGGTCTGGGCGATGC +
Preference number: 4 (lower is better)
Translates to: SERSQVEPSSGRSSRAGTYCSHV*SRSGRC
Trigger: GCATCGCCCAGACCTACTCCACACATGGCTACAATA...AGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp AATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTGGGTCAGGATCTGGCTaGGCTTCATGGGGTCCCGCC +
Preference number: 4 (lower is better)
Translates to: NPVLGRPGEGFRSLPLEPGSGSG*ASWGPA
Trigger: GGCGGGACCCCATGAAGCCCAGCCAGATCCTGACCC...AGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCAGGGCTCCCCAGGGGAGATaGGAAAGAGTCCAAGCCACT +
Preference number: 4 (lower is better)
Translates to: APQGRWERVQATERKCGRAPQGR*ERVQAT
Trigger: AGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGC...CCTGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp CAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAATGTACTTGGAAGACCTaGGGAGGGTTTCAGGAGTCT +
Preference number: 4 (lower is better)
Translates to: QATPWEVRGAKWSPAVAECTWKT*GGFQES
Trigger: AGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACA...TTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTCACGGCGGCTTCAATCCTGTACTTaGAAGACCTGGGGAGGGTTT +
Preference number: 4 (lower is better)
Translates to: VWPLLRIKDRCYLQGSRRLQSCT*KTWGGF
Trigger: AAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAG...CCGCCGTGACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTCACGGCGGCTGGGCACTGACCCATaGTCCTTGGTTAATTTCACT +
Preference number: 4 (lower is better)
Translates to: VWPLLRIKDRCYLQGSRRLGTDP*SLVNFT
Trigger: AGTGAAATTAACCAAGGACCATGGGTCAGTGCCCAG...CCGCCGTGACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GGGCAGCACTTGACGGGCCAGCTCCCAGCTGCAGCTGAAAGGGCTGGAAGGGCATTCTTTTTAAAGCCCTaGGCACTGACCCATGGTCCT +
Preference number: 4 (lower is better)
Translates to: GQHLTGQLPAAAERAGRAFFLKP*ALTHGP
Trigger: AGGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAA...TGCCCTTCCAGCCCTTTCAGCTGCAGCTGGGAGCTGGCCCGTCAAGTGCTGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp ATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTGCAGAAGCAGCCGCGCTaGGACTTGTGGGCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: ILYLEDLGRVSGVFLWSLQKQPR*DLWAGS
Trigger: AGACCCTGCCCACAAGTCCCAGCGCGGCTGCTTCTG...CAGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp AATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTAGTGGAGCCCAGCAGTaGCAGAAGCAGCCGCGCTGG +
Preference number: 4 (lower is better)
Translates to: NPVLGRPGEGFRSLPLEPSGAQQ*QKQPRW
Trigger: CCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACT...AGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCAGGGTGAGAGGAGCCAAGTaGAGCCCAGCAGTGGCAGAA +
Preference number: 4 (lower is better)
Translates to: APQGRWERVQATERKCGRVRGAK*SPAVAE
Trigger: TTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCAC...CCTGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp CAACATGAGCAGCCCCAACAGCGCCAGCACGATCTTGATGATGAGCCACTTGTATCACAGCTCCTCAGCTaGGCCTGGAGGCGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: QHEQPQQRQHDLDDEPLVSQLLS*AWRRWL
Trigger: CAGCCAGCGCCTCCAGGCCCAGCTGAGGAGCTGTGA...TACAAGTGGCTCATCATCAAGATCGTGCTGGCGCTGTTGGGGCTGCTCATGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
CDS-3UTR CCA 90 bp GGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGCTCTGTTCTCAGAACCTaGAGATGTTGGTGTTCATGG +
Preference number: 4 (lower is better)
Translates to: GAKWSPAVAEAAALGLVGSVLRT*RCWCSW
Trigger: CCATGAACACCAACATCTCCAGGTTCTGAGAACAGA...GCCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
CDS-3UTR CCA 90 bp GGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCATCTGTTCTCAGAACCTaGAGATGTTGGTGTTCATGG +
Preference number: 4 (lower is better)
Translates to: GRLGPRHEEWTLGSSGSPSVLRT*RCWCSW
Trigger: CCATGAACACCAACATCTCCAGGTTCTGAGAACAGA...TGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
CDS-3UTR TCA 90 bp GGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCAAGACTTTGCTGTAGTTaGAAACCTGAATCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: GRLGPRHEEWTLGSSGSPRLCCS*KPESPA
Trigger: TGCTGGAGATTCAGGTTTTCAACTACAGCAAAGTCT...TGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR TCA 90 bp GTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTCACGGCGGTCATCACTTGCGTTCTaGATCAGGTCTACTTCTTCC +
Preference number: 4 (lower is better)
Translates to: VWPLLRIKDRCYLQGSRRSSLAF*IRSTSS
Trigger: GGAAGAAGTAGACCTGATTCAGAACGCAAGTGATGA...CCGCCGTGACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR TCA 90 bp ATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTGAGTAGTTCCTGTCGGTaGCCTGGGGCCGCATTGGTG +
Preference number: 4 (lower is better)
Translates to: ILYLEDLGRVSGVFLWSLSSSCR*PGAALV
Trigger: CACCAATGCGGCCCCAGGTCACCGACAGGAACTACT...CAGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR TCA 90 bp GTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTCACGGCGGAGGACTTCTCCGTTTTaGTCATCTCCTGTATGTCGT +
Preference number: 4 (lower is better)
Translates to: VWPLLRIKDRCYLQGSRRRTSPF*SSPVCR
Trigger: ACGACATACAGGAGATGATCAAAACGGAGAAGTCCT...CCGCCGTGACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp ATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTGCGAAGGTCCGGCCCATaGAGTCAGCTTTGCCCATGG +
Preference number: 4 (lower is better)
Translates to: ILYLEDLGRVSGVFLWSLRRSGP*SQLCPW
Trigger: CCATGGGCAAAGCTGACTTCATGGGCCGGACCTTCG...CAGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp ATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTGCTCCTTGCCCTTCATTaGCCCCTTCAGGCCCTCGGT +
Preference number: 4 (lower is better)
Translates to: ILYLEDLGRVSGVFLWSLLLALH*PLQALG
Trigger: ACCGAGGGCCTGAAGGGGTCAATGAAGGGCAAGGAG...CAGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp AGGCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCACTCGGACCAGCACATTaGTGGGGTCATTGCTCGGGA +
Preference number: 4 (lower is better)
Translates to: RLPRGDGKESKPLKGNAALGPAH*WGHCSG
Trigger: TCCCGAGCAATGACCCCATCAATGTGCTGGTCCGAG...TGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp GGGCAGCACTTGACGGGCCAGCTCCCAGCTGCAGCTGAAAGGGCTGGAAGGGCAGAGTATCGGTCATCATaGGGAAGTCATCAATTTCCC +
Preference number: 4 (lower is better)
Translates to: GQHLTGQLPAAAERAGRAEYRSS*GSHQFP
Trigger: GGGAAATTGATGACTTCCTCATGATGACCGATACTC...TGCCCTTCCAGCCCTTTCAGCTGCAGCTGGGAGCTGGCCCGTCAAGTGCTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
CDS-3UTR TCA 90 bp GTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTCACGGCGGGAGTATCGGTCATCATaGGGAAGTCATCAATTTCCC +
Preference number: 4 (lower is better)
Translates to: VWPLLRIKDRCYLQGSRREYRSS*GSHQFP
Trigger: GGGAAATTGATGACTTCCTCATGATGACCGATACTC...CCGCCGTGACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
CDS-3UTR GCA 90 bp GATACCTTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCCGATCCGGTCGCCCCTaGCCCGCAGCTCCGAGACTG +
Preference number: 4 (lower is better)
Translates to: DTFCSFILFKALGTDPWSRSGRP*PAAPRL
Trigger: CAGTCTCGGAGCTGCGGGGCAGGGGCGACCGGATCG...GGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAAGGTATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR GCA 90 bp CAACATGAGCAGCCCCAACAGCGCCAGCACGATCTTGATGATGAGCCACTTGTACTGCACCCCCTTCCCTaGACACTCGATGTCCACCCG +
Preference number: 4 (lower is better)
Translates to: QHEQPQQRQHDLDDEPLVLHPLP*TLDVHP
Trigger: CGGGTGGACATCGAGTGTGCAGGGAAGGGGGTGCAG...TACAAGTGGCTCATCATCAAGATCGTGCTGGCGCTGTTGGGGCTGCTCATGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
CDS-3UTR GCA 90 bp ATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTGTGGATCAGGGACGACTaGACCCCCTTCCCTGCACAC +
Preference number: 4 (lower is better)
Translates to: ILYLEDLGRVSGVFLWSLWIRDD*TPFPAH
Trigger: GTGTGCAGGGAAGGGGGTGCAGTCGTCCCTGATCCA...CAGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GAGGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCAGCAAGTTGAAAGTGTaGAGCCAGTCCTCAAAGTTA +
Preference number: 4 (lower is better)
Translates to: EAGSAQGMKSGRWAPQAPSKLKV*SQSSKL
Trigger: TAACTTTGAGGACTGGCTGCACACTTTCAACTTGCT...GGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCAAGCAAGTTGAAAGTGTaGAGCCAGTCCTCAAAGTTA +
Preference number: 4 (lower is better)
Translates to: GRLGPRHEEWTLGSSGSPSKLKV*SQSSKL
Trigger: TAACTTTGAGGACTGGCTGCACACTTTCAACTTGCT...TGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp AGGAAGAGCCCCAACATGAGCAGCCCCAACAGCGCCAGCACGATCTTGATGATGCGCGGATGTCAGTCTTaGCTAGCCGGATGGCGATGT +
Preference number: 4 (lower is better)
Translates to: RKSPNMSSPNSASTILMMRGCQS*LAGWRC
Trigger: ACATCGCCATCCGGCTAGGCAAGACTGACATCCGCG...CATCATCAAGATCGTGCTGGCGCTGTTGGGGCTGCTCATGTTGGGGCTCTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
CDS-3UTR GCA 90 bp ATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTGGCCAACAGCGCCACATaGTCGTCTGTGGGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: ILYLEDLGRVSGVFLWSLANSAT*SSVGFL
Trigger: GAGGAAGCCCACAGACGAGCATGTGGCGCTGTTGGC...CAGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp AATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTGCAGGGTCTGGCCCCTaGTGCGGATCAAAGACCGGT +
Preference number: 4 (lower is better)
Translates to: NPVLGRPGEGFRSLPLEPAGSGP*CGSKTG
Trigger: ACCGGTCTTTGATCCGCAGCAGGGGCCAGACCCTGC...AGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp AGGAAGAGCCCCAACATGAGCAGCCCCAACAGCGCCAGCACGATCTTGATGATGATGGGGAGTCCCCTCTaGTGCTTCTCACAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: RKSPNMSSPNSASTILMMMGSPL*CFSQLL
Trigger: GAGGAGCTGTGAGAAGCAGCAGAGGGGACTCCCCAT...CATCATCAAGATCGTGCTGGCGCTGTTGGGGCTGCTCATGTTGGGGCTCTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
CDS-3UTR CCA 90 bp AATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTGAAGGAGCTAGCCGGTaGAGCACGGCTCACACGCCT +
Preference number: 4 (lower is better)
Translates to: NPVLGRPGEGFRSLPLEPEGASR*STAHTP
Trigger: AGGCGTGTGAGCCGTGCTCCACCGGCTAGCTCCTTC...AGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CCA 90 bp GAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTACATCCGGAGAGACATaGAAGTCGAAGACGAAGTAC +
Preference number: 4 (lower is better)
Translates to: ERSQVEPSSGRSSRAGTCTSGET*KSKTKY
Trigger: GTACTTCGTCTTCGACTTCCATGTCTCTCCGGATGT...ACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CCA 90 bp CAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAATGCGCAGCAGGTTCTTaGAGTGAATCACCGAAATCT +
Preference number: 4 (lower is better)
Translates to: QATPWEVRGAKWSPAVAECAAGS*SESPKS
Trigger: AGATTTCGGTGATTCACTCCAAGAACCTGCTGCGCA...TTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CCA 90 bp ATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTGTTCCTGTCGGTGACCTaGGGCCGCATTGGTGGAGTG +
Preference number: 4 (lower is better)
Translates to: ILYLEDLGRVSGVFLWSLFLSVT*GRIGGV
Trigger: CACTCCACCAATGCGGCCCCAGGTCACCGACAGGAA...CAGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CCA 90 bp AATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTCGGGATGAGTGGCCCTaGTCCTTGTCAGCGAGGGAG +
Preference number: 4 (lower is better)
Translates to: NPVLGRPGEGFRSLPLEPRDEWP*SLSARE
Trigger: CTCCCTCGCTGACAAGGACCAGGGCCACTCATCCCG...AGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp AGGCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCAATGTGCGCTCGGAGCTaGAACGCCTGCTTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: RLPRGDGKESKPLKGNAAMCARS*NACFLV
Trigger: CACCAAGAAGCAGGCGTTCCAGCTCCGAGCGCACAT...TGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp AGGAAGAGCCCCAACATGAGCAGCCCCAACAGCGCCAGCACGATCTTGATGATGGCAGGTCTCCAGCTGTaGCGTTGCCACGGTAGATCT +
Preference number: 4 (lower is better)
Translates to: RKSPNMSSPNSASTILMMAGLQL*RCHGRS
Trigger: AGATCTACCGTGGCAACGCCACAGCTGGAGACCTGC...CATCATCAAGATCGTGCTGGCGCTGTTGGGGCTGCTCATGTTGGGGCTCTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
CDS-3UTR CCA 90 bp CAGGATAGTATTAGGAGGGAGCTGTTTGGACACACAATCAAGCTCAGCCCCCGACGTGGCCGGTCCACCTaGGCCAGGTTCACCCGCTTT +
Preference number: 4 (lower is better)
Translates to: QDSIRRELFGHTIKLSPRRGRST*ARFTRF
Trigger: AAAGCGGGTGAACCTGGCCCAGGTGGACCGGCCACG...TCGGGGGCTGAGCTTGATTGTGTGTCCAAACAGCTCCCTCCTAATACTATCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426958.1
CDS-3UTR CCA 90 bp AGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGGAAGTTGCTCCTTCATaGTGTCAATGGAGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: RSQVEPSSGRSSRAGTCGEVAPS*CQWRQS
Trigger: ACTTTGCCTCCATTGACACCATGAAGGAGCAACTTC...CCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCAGGCACGTCCTCTGGGAGTaGCACTTTGTACACGCAGAG +
Preference number: 4 (lower is better)
Translates to: APQGRWERVQATERKCGRHVLWE*HFVHAE
Trigger: CTCTGCGTGTACAAAGTGCCACTCCCAGAGGACGTG...CCTGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCAGGTCTTGCCTAGCCGGATaGCGATGTAGGGGTCAGCTT +
Preference number: 4 (lower is better)
Translates to: APQGRWERVQATERKCGRSCLAG*RCRGQL
Trigger: AAGCTGACCCCTACATCGCCATCCGGCTAGGCAAGA...CCTGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp CAACATGAGCAGCCCCAACAGCGCCAGCACGATCTTGATGATGAGCCACTTGTAAGGCGGGTCAGGATCTaGCTGGGCTTCATGGGGTCC +
Preference number: 4 (lower is better)
Translates to: QHEQPQQRQHDLDDEPLVRRVRI*LGFMGS
Trigger: GGACCCCATGAAGCCCAGCCAGATCCTGACCCGCCT...TACAAGTGGCTCATCATCAAGATCGTGCTGGCGCTGTTGGGGCTGCTCATGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
CDS-3UTR CCA 90 bp ATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTGAGGCGTCCCAGGGGCTaGCATGTCCATGGGGAACAT +
Preference number: 4 (lower is better)
Translates to: ILYLEDLGRVSGVFLWSLRRPRG*HVHGEH
Trigger: ATGTTCCCCATGGACATGCCAGCCCCTGGGACGCCT...CAGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp AGGCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCATCGTCAGCGGAGAAGTaGTCCGCATCCCAGATCTGC +
Preference number: 4 (lower is better)
Translates to: RLPRGDGKESKPLKGNAASSAEK*SASQIC
Trigger: GCAGATCTGGGATGCGGACCACTTCTCCGCTGACGA...TGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp AATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTCCATGGTGCACTGCTTaGCTGTCTTTGCGCCCCGCG +
Preference number: 4 (lower is better)
Translates to: NPVLGRPGEGFRSLPLEPPWCTA*LSLRPA
Trigger: CGCGGGGCGCAAAGACAGCCAAGCAGTGCACCATGG...AGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp AGGCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCACGGTGGCCATCTCCATaGTGCACTGCTTGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: RLPRGDGKESKPLKGNAARWPSP*CTAWLS
Trigger: AGACAGCCAAGCAGTGCACCATGGAGATGGCCACCG...TGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp TCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTGGGCAAGCCGCAGCCTaGGGCAGTGAGGACAGGCGG +
Preference number: 4 (lower is better)
Translates to: SLKLQSCTWKTWGGFQESGQAAA*GSEDRR
Trigger: CCGCCTGTCCTCACTGCCCCAGGCTGCGGCTTGCCC...AGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp TGGGCAGGGTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTCTTCAATCCTGTACTTaGAAGACCTGGGGAGGGTTT +
Preference number: 4 (lower is better)
Translates to: WAGSGPCCGSKTGAICRGLQSCT*KTWGGF
Trigger: AAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAG...ACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGACCCTGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp AGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTCTTCAATCCTGTACTTaGAAGACCTGGGGAGGGTTT +
Preference number: 4 (lower is better)
Translates to: SERSQVEPSSGRSSRAGTLQSCT*KTWGGF
Trigger: AAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAG...AGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTTTCTTTTTAAAGCCCTaGGCACTGACCCATGGTCCT +
Preference number: 4 (lower is better)
Translates to: ERSQVEPSSGRSSRAGTCFFLKP*ALTHGP
Trigger: AGGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAA...ACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp ATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTGCTTGTGGGCAGGGTCTaGCCCCTGCTGCGGATCAAA +
Preference number: 4 (lower is better)
Translates to: ILYLEDLGRVSGVFLWSLLVGRV*PLLRIK
Trigger: TTTGATCCGCAGCAGGGGCCAGACCCTGCCCACAAG...CAGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp CAACATGAGCAGCCCCAACAGCGCCAGCACGATCTTGATGATGAGCCACTTGTACAGAAGCAGCCGCGCTaGGACTTGTGGGCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: QHEQPQQRQHDLDDEPLVQKQPR*DLWAGS
Trigger: AGACCCTGCCCACAAGTCCCAGCGCGGCTGCTTCTG...TACAAGTGGCTCATCATCAAGATCGTGCTGGCGCTGTTGGGGCTGCTCATGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
CDS-3UTR CCA 90 bp AGGAAGAGCCCCAACATGAGCAGCCCCAACAGCGCCAGCACGATCTTGATGATGGTGAGAGGAGCCAAGTaGAGCCCAGCAGTGGCAGAA +
Preference number: 4 (lower is better)
Translates to: RKSPNMSSPNSASTILMMVRGAK*SPAVAE
Trigger: TTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCAC...CATCATCAAGATCGTGCTGGCGCTGTTGGGGCTGCTCATGTTGGGGCTCTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
3UTR CAA 72 bp CCCAACATGAGCAGCCCCAACAGCGCCAGCACGATCTaGATGATGAGCCACTTGTACCGGGTGCAGATGAGG +
Preference number: 4 (lower is better)
Translates to: PNMSSPNSASTI*MMSHLYRVQMR
Trigger: CCTCATCTGCACCCGGTACAAGTGGCTCATCATCAAGATCGTGCTGGCGCTGTTGGGGCTGCTCATGTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
CDS-3UTR TCA 90 bp ATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTGCCTTGTGGGGCGTCTTaGTGTTGTCCCCTTTGCCCA +
Preference number: 4 (lower is better)
Translates to: ILYLEDLGRVSGVFLWSLPCGAS*CCPLCP
Trigger: TGGGCAAAGGGGACAACATCAAGACGCCCCACAAGG...CAGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR TCA 90 bp AATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTCCCTCGTTCAGGTCCTaGTGCTCATCCAGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: NPVLGRPGEGFRSLPLEPPSFRS*CSSSSV
Trigger: CACGCTGCTGGATGAGCATCAGGACCTGAACGAGGG...AGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR TCA 90 bp TGGGCAGGGTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTTCATCACTTGCGTTCTaGATCAGGTCTACTTCTTCC +
Preference number: 4 (lower is better)
Translates to: WAGSGPCCGSKTGAICRGSSLAF*IRSTSS
Trigger: GGAAGAAGTAGACCTGATTCAGAACGCAAGTGATGA...ACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGACCCTGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR TCA 90 bp TGGAAACCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGTGCTCATCATCCAGATaGAGATGTCGGGAATGCTGT +
Preference number: 4 (lower is better)
Translates to: WKPTGRTGDPLGSERSQVCSSSR*RCRECC
Trigger: ACAGCATTCCCGACATCTTCATCTGGATGATGAGCA...CACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGGTTTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp AGGAAGAGCCCCAACATGAGCAGCCCCAACAGCGCCAGCACGATCTTGATGATGACTCCTTCTTGGAGATaGCGATCTTCTCCTCCGCCG +
Preference number: 4 (lower is better)
Translates to: RKSPNMSSPNSASTILMMTPSWR*RSSPPP
Trigger: CGGCGGAGGAGAAGATCGTCATCTCCAAGAAGGAGT...CATCATCAAGATCGTGCTGGCGCTGTTGGGGCTGCTCATGTTGGGGCTCTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
CDS-3UTR TCA 90 bp AGGCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCACCTCCACCTTGCCCGTaGGCTCAAACTCATCGTTCT +
Preference number: 4 (lower is better)
Translates to: RLPRGDGKESKPLKGNAAPPPCP*AQTHRS
Trigger: AGAACGATGAGTTTGAGCTCACGGGCAAGGTGGAGG...TGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp CAACATGAGCAGCCCCAACAGCGCCAGCACGATCTTGATGATGAGCCACTTGTACCTTGGCGCAGTCCTTaGCAGTCTCCTCCTCCACGA +
Preference number: 4 (lower is better)
Translates to: QHEQPQQRQHDLDDEPLVPWRSP*QSPPPR
Trigger: TCGTGGAGGAGGAGACTGGCAAGGACTGCGCCAAGG...TACAAGTGGCTCATCATCAAGATCGTGCTGGCGCTGTTGGGGCTGCTCATGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
CDS-3UTR GCA 90 bp AATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTCCTTGGCGCAGTCCTTaGCAGTCTCCTCCTCCACGA +
Preference number: 4 (lower is better)
Translates to: NPVLGRPGEGFRSLPLEPPWRSP*QSPPPR
Trigger: TCGTGGAGGAGGAGACTGGCAAGGACTGCGCCAAGG...AGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp ATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTGACCACCAGTCCAGCATaGTCTCGTCTGGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: ILYLEDLGRVSGVFLWSLTTSPA*SRLAPP
Trigger: AGGAGGAGCCAGACGAGAGCATGCTGGACTGGTGGT...CAGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp AATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTTGGACGTCTGTGTCCTaGTTGTCCTCCTGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: NPVLGRPGEGFRSLPLEPWTSVS*LSSCWP
Trigger: GGGCCAGCAGGAGGACAAGCAGGACACAGACGTCCA...AGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp AATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTAAGACCGGTGCTATCTaGAGGGGTCACGGCGGGGAT +
Preference number: 4 (lower is better)
Translates to: NPVLGRPGEGFRSLPLEPKTGAI*RGHGGD
Trigger: ATCCCCGCCGTGACCCCTGCAGATAGCACCGGTCTT...AGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp ATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTGCGGATCAAAGACCGGTaGTATCTGCAGGGGTCACGG +
Preference number: 4 (lower is better)
Translates to: ILYLEDLGRVSGVFLWSLRIKDR*YLQGSR
Trigger: CCGTGACCCCTGCAGATAGCACCGGTCTTTGATCCG...CAGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCAGGAGCCGAATGGCCAGATaGTCAAGGTCTTCCATCTCC +
Preference number: 4 (lower is better)
Translates to: APQGRWERVQATERKCGRSRMAR*SRSSIS
Trigger: GGAGATGGAAGACCTTGACCATCTGGCCATTCGGCT...CCTGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CCA 90 bp ATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTGATGTGCGCTCGGAGCTaGAACGCCTGCTTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: ILYLEDLGRVSGVFLWSLMCARS*NACFLV
Trigger: CACCAAGAAGCAGGCGTTCCAGCTCCGAGCGCACAT...CAGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp TCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCAGGGGAGAAGTCAGCTTTGCCCATaGAATCCTGGTCATAGATTT +
Preference number: 4 (lower is better)
Translates to: SAQGMKSGRWAPQAPQGRSQLCP*NPGHRF
Trigger: AAATCTATGACCAGGATTCCATGGGCAAAGCTGACT...TCTCCCCTGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp TTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCTTGGTTGGGGGCCGAGCGGTCTaGGGGCCGGTAGATGAAGCG +
Preference number: 4 (lower is better)
Translates to: FCSFILFKALGTDPWSLVGGRAV*GPVDEA
Trigger: CGCTTCATCTACCGGCCCCCAGACCGCTCGGCCCCC...AACCAAGGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp TTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCTTGGTTCCGTGGTGTTCCAGCTaGGGGCCGAGCGGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: FCSFILFKALGTDPWSLVPWCSS*GPSGLG
Trigger: CCCCAGACCGCTCGGCCCCCAGCTGGAACACCACGG...AACCAAGGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp TGGAAACCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGCCTTCATGGTGTCAATaGAGGCAAAGTACTTGGACC +
Preference number: 4 (lower is better)
Translates to: WKPTGRTGDPLGSERSQVPSWCQ*RQSTWT
Trigger: GGTCCAAGTACTTTGCCTCCATTGACACCATGAAGG...CACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGGTTTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp TGGGCAGGGTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTGAAGTTGCTCCTTCATaGTGTCAATGGAGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: WAGSGPCCGSKTGAICRGEVAPS*CQWRQS
Trigger: ACTTTGCCTCCATTGACACCATGAAGGAGCAACTTC...ACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGACCCTGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp TCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTCCAGGGGGCCCAAAGTaGGGGCCGTCCACTTTGCCG +
Preference number: 4 (lower is better)
Translates to: SLKLQSCTWKTWGGFQESPGGPK*GPSTLP
Trigger: CGGCAAAGTGGACGGCCCCCACTTTGGGCCCCCTGG...AGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp AATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTAGGCGTCCCAGGGGCTaGCATGTCCATGGGGAACAT +
Preference number: 4 (lower is better)
Translates to: NPVLGRPGEGFRSLPLEPRRPRG*HVHGEH
Trigger: ATGTTCCCCATGGACATGCCAGCCCCTGGGACGCCT...AGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCAGGGCAGCTCGTACTTCTTaGGCTTCCGAGGTGAGATGT +
Preference number: 4 (lower is better)
Translates to: APQGRWERVQATERKCGRAARTS*ASEVRC
Trigger: ACATCTCACCTCGGAAGCCCAAGAAGTACGAGCTGC...CCTGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp ATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTGTCGTCAGCGGAGAAGTaGTCCGCATCCCAGATCTGC +
Preference number: 4 (lower is better)
Translates to: ILYLEDLGRVSGVFLWSLSSAEK*SASQIC
Trigger: GCAGATCTGGGATGCGGACCACTTCTCCGCTGACGA...CAGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp TTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCTTGGTTTCAGAGGGGCGGGACTaGGCAAGCCGCAGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: FCSFILFKALGTDPWSLVSEGRD*ASRSLG
Trigger: CCCCAGGCTGCGGCTTGCCCAGTCCCGCCCCTCTGA...AACCAAGGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GATACCTTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCGGGCCTGAAGAAGGGTaGCGCCTCAGCCAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: DTFCSFILFKALGTDPWSGPEEG*RLSQVG
Trigger: CCCCACCTGGCTGAGGCGCCACCCTTCTTCAGGCCC...GGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAAGGTATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGCCTGACCCATGGTCCTTaGTTAATTTCACTAAAGCTT +
Preference number: 4 (lower is better)
Translates to: GAKWSPAVAEAAALGLVGLTHGP*LISLKL
Trigger: AAGCTTTAGTGAAATTAACCAAGGACCATGGGTCAG...GCCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp GAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTAGACTTTGCTGTAGTTaGAAACCTGAATCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: ERSQVEPSSGRSSRAGTCRLCCS*KPESPA
Trigger: TGCTGGAGATTCAGGTTTTCAACTACAGCAAAGTCT...ACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR TCA 90 bp CAACATGAGCAGCCCCAACAGCGCCAGCACGATCTTGATGATGAGCCACTTGTATCTTGCGCAGGTCAATaGAGTGGGTGCCGATGGCCA +
Preference number: 4 (lower is better)
Translates to: QHEQPQQRQHDLDDEPLVSCAGQ*SGCRWP
Trigger: TGGCCATCGGCACCCACTTCATTGACCTGCGCAAGA...TACAAGTGGCTCATCATCAAGATCGTGCTGGCGCTGTTGGGGCTGCTCATGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272371.7
CDS-3UTR TCA 90 bp TCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTCCATGGGCACGGGCATaGTGGGACCTCGGTCCACGT +
Preference number: 4 (lower is better)
Translates to: SLKLQSCTWKTWGGFQESPWARA*WDLGPR
Trigger: ACGTGGACCGAGGTCCCATCATGCCCGTGCCCATGG...AGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp GCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCAGGCCAGAGCCAGAGCTCTaGGTTTTCTTCTTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: APQGRWERVQATERKCGRPEPEL*VFFFFS
Trigger: GGAGAAGAAGAAGAAAACTCAGAGCTCTGGCTCTGG...CCTGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp ATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTGTGCCCCGAAGCAAGTTaGAAGTGTGCAGCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: ILYLEDLGRVSGVFLWSLCPEAS*KCAASP
Trigger: AGGACTGGCTGCACACTTTCAACTTGCTTCGGGGCA...CAGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp CAACATGAGCAGCCCCAACAGCGCCAGCACGATCTTGATGATGAGCCACTTGTAGGTCAGCTTTGCCGTTaGTGTCAGCAGGGTGCAGGT +
Preference number: 4 (lower is better)
Translates to: QHEQPQQRQHDLDDEPLVGQLCR*CQQGAG
Trigger: ACCTGCACCCTGCTGACATCAACGGCAAAGCTGACC...TACAAGTGGCTCATCATCAAGATCGTGCTGGCGCTGTTGGGGCTGCTCATGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
CDS-3UTR TCA 90 bp GCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCAGGTCCCAAAGACAGGGTTaGGCTGCTTGGAGATGTAGT +
Preference number: 4 (lower is better)
Translates to: APQGRWERVQATERKCGRSQRQG*AAWRCS
Trigger: ACTACATCTCCAAGCAGCTCAACCCTGTCTTTGGGA...CCTGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp ATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTGCCTCCACCTTGCCCGTaGGCTCAAACTCATCGTTCT +
Preference number: 4 (lower is better)
Translates to: ILYLEDLGRVSGVFLWSLPPPCP*AQTHRS
Trigger: AGAACGATGAGTTTGAGCTCACGGGCAAGGTGGAGG...CAGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp ATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTGAGTAGCGAGCCGACTTaGGAGGGTTCAGGAACCAGA +
Preference number: 4 (lower is better)
Translates to: ILYLEDLGRVSGVFLWSLSSEPT*EGSGTR
Trigger: TCTGGTTCCTGAACCCTCTCAAGTCGGCTCGCTACT...CAGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
CDS-3UTR TCA 90 bp AATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTCCCCGAGGATTTTCTTaGCCAGGTAGCCAGGCACAG +
Preference number: 4 (lower is better)
Translates to: NPVLGRPGEGFRSLPLEPPRGFS*PGSQAQ
Trigger: CTGTGCCTGGCTACCTGGTCAAGAAAATCCTCGGGG...AGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
CDS-3UTR TCA 90 bp TCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCTGGAGCCTGGGCCTaGAGAAGGGTGGCGCCTCAG +
Preference number: 4 (lower is better)
Translates to: SLKLQSCTWKTWGGFQESSGAWA*RRVAPQ
Trigger: CTGAGGCGCCACCCTTCTTCAGGCCCAGGCTCCAGA...AGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp AATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTAACTGGTGCTCTGGCTaGGAGTACACGGTTCCCACG +
Preference number: 4 (lower is better)
Translates to: NPVLGRPGEGFRSLPLEPNWCSG*EYTVPT
Trigger: CGTGGGAACCGTGTACTCGCAGCCAGAGCACCAGTT...AGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR GCA 90 bp ATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTGAGGAAGCGCAGCTTCTaGAGGAAGTTCTGGCACAGC +
Preference number: 4 (lower is better)
Translates to: ILYLEDLGRVSGVFLWSLRKRSF*RKFWHS
Trigger: GCTGTGCCAGAACTTCCTGCAGAAGCTGCGCTTCCT...CAGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp ATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTGGCAGTACGCCTCGTCTaGCATCTTCACCAGGGGTTT +
Preference number: 4 (lower is better)
Translates to: ILYLEDLGRVSGVFLWSLAVRLV*HLHQGF
Trigger: AAACCCCTGGTGAAGATGGCAGACGAGGCGTACTGC...CAGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp ATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTGCTCCAGCTGTGGCGTTaGCACGGTAGATCTGGTAGT +
Preference number: 4 (lower is better)
Translates to: ILYLEDLGRVSGVFLWSLLQLWR*HGRSGS
Trigger: ACTACCAGATCTACCGTGGCAACGCCACAGCTGGAG...CAGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp AGTATTAGGAGGGAGCTGTTTGGACACACAATCAAGCTCAGCCCCCGACAGTCATGGATCAGGGACGACTaGACCCCCTTCCCTGCACAC +
Preference number: 4 (lower is better)
Translates to: SIRRELFGHTIKLSPRQSWIRDD*TPFPAH
Trigger: GTGTGCAGGGAAGGGGGTGCAGTCGTCCCTGATCCA...TGACTGTCGGGGGCTGAGCTTGATTGTGTGTCCAAACAGCTCCCTCCTAATACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000426958.1
CDS-3UTR GCA 90 bp AGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTAGCAAGTTGAAAGTGTaGAGCCAGTCCTCAAAGTTA +
Preference number: 4 (lower is better)
Translates to: SERSQVEPSSGRSSRAGTSKLKV*SQSSKL
Trigger: TAACTTTGAGGACTGGCTGCACACTTTCAACTTGCT...AGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp CAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAAGCAAGTTGAAAGTGTaGAGCCAGTCCTCAAAGTTA +
Preference number: 4 (lower is better)
Translates to: QATPWEVRGAKWSPAVAESKLKV*SQSSKL
Trigger: TAACTTTGAGGACTGGCTGCACACTTTCAACTTGCT...TTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp AATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTGGATGCCCTGGAACATaGCGTAGGTGGAGTCGTAGC +
Preference number: 4 (lower is better)
Translates to: NPVLGRPGEGFRSLPLEPGCPGT*RRWSRS
Trigger: GCTACGACTCCACCTACGGCATGTTCCAGGGCATCC...AGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp CAACATGAGCAGCCCCAACAGCGCCAGCACGATCTTGATGATGAGCCACTTGTAGGTCATTGCTCGGGATaGCCTGGAACATGCCGTAGG +
Preference number: 4 (lower is better)
Translates to: QHEQPQQRQHDLDDEPLVGHCSG*PGTCRR
Trigger: CCTACGGCATGTTCCAGGGCATCCCGAGCAATGACC...TACAAGTGGCTCATCATCAAGATCGTGCTGGCGCTGTTGGGGCTGCTCATGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
CDS-3UTR GCA 90 bp ATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTGCCACTTTGCCGTCTTTaGAGAGGCGGGTCAGGATCT +
Preference number: 4 (lower is better)
Translates to: ILYLEDLGRVSGVFLWSLPLCRL*RGGSGS
Trigger: AGATCCTGACCCGCCTCTGCAAAGACGGCAAAGTGG...CAGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp TTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCTTGGTTTCCGCATCCCAGATCTaGAGGGTGAGCCGCGCGGGG +
Preference number: 4 (lower is better)
Translates to: FCSFILFKALGTDPWSLVSASQI*RVSRAG
Trigger: CCCCGCGCGGCTCACCCTGCAGATCTGGGATGCGGA...AACCAAGGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp ATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTGATCTCCATGGTGCACTaGTTGGCTGTCTTTGCGCCC +
Preference number: 4 (lower is better)
Translates to: ILYLEDLGRVSGVFLWSLISMVH*LAVFAP
Trigger: GGGCGCAAAGACAGCCAAGCAGTGCACCATGGAGAT...CAGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GATACCTTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCGGGGGTCAGGTTCATTaGGGGCCAGGCCCACTGGGT +
Preference number: 4 (lower is better)
Translates to: DTFCSFILFKALGTDPWSGGQVH*GPGPLG
Trigger: ACCCAGTGGGCCTGGCCCGCAATGAACCTGACCCCC...GGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAAGGTATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp CAACATGAGCAGCCCCAACAGCGCCAGCACGATCTTGATGATGAGCCACTTGTAATGGGGAGTCCCCTCTaGTGCTTCTCACAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: QHEQPQQRQHDLDDEPLVMGSPL*CFSQLL
Trigger: GAGGAGCTGTGAGAAGCAGCAGAGGGGACTCCCCAT...TACAAGTGGCTCATCATCAAGATCGTGCTGGCGCTGTTGGGGCTGCTCATGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
CDS-3UTR GCA 90 bp AATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTATGGGGAGTCCCCTCTaGTGCTTCTCACAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: NPVLGRPGEGFRSLPLEPMGSPL*CFSQLL
Trigger: GAGGAGCTGTGAGAAGCAGCAGAGGGGACTCCCCAT...AGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GGAGGGAGCTGTTTGGACACACAATCAAGCTCAGCCCCCGACAGTCACATGCCATGTGTCACACGAAGTTaGATGTTCCCAGCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: GGSCLDTQSSSAPDSHMPCVTRS*MFPASR
Trigger: CCTGCTGGCTGGGAACATGCAACTTCGTGTGACACA...TGGCATGTGACTGTCGGGGGCTGAGCTTGATTGTGTGTCCAAACAGCTCCCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426958.1
CDS-3UTR GCA 90 bp GGGAGCTGTTTGGACACACAATCAAGCTCAGCCCCCGACAGTCACATGCCAAAGCCCCCGACAGTCACATaGCAAAGGAGGCTCTTAGTG +
Preference number: 4 (lower is better)
Translates to: GSCLDTQSSSAPDSHMPKPPTVT*QRRLLV
Trigger: CACTAAGAGCCTCCTTTGGCATGTGACTGTCGGGGG...CTTTGGCATGTGACTGTCGGGGGCTGAGCTTGATTGTGTGTCCAAACAGCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000426958.1
CDS-3UTR CCA 90 bp TGGGCAGGGTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTCTCCATCTTAATGTCTaGCTTAGATCGCTTGTTGGA +
Preference number: 4 (lower is better)
Translates to: WAGSGPCCGSKTGAICRGLHLNV*LRSLVG
Trigger: TCCAACAAGCGATCTAAGCCAGACATTAAGATGGAG...ACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGACCCTGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CCA 90 bp AATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGGGGGCCGAGCGGTCTaGGGGCCGGTAGATGAAGCG +
Preference number: 4 (lower is better)
Translates to: NFTKASILYLEDLGRVSGGGRAV*GPVDEA
Trigger: CGCTTCATCTACCGGCCCCCAGACCGCTCGGCCCCC...TCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp CAACATGAGCAGCCCCAACAGCGCCAGCACGATCTTGATGATGAGCCACTTGTACCGGGACACGTCCTCTaGGAGTGGCACTTTGTACAC +
Preference number: 4 (lower is better)
Translates to: QHEQPQQRQHDLDDEPLVPGHVL*EWHFVH
Trigger: GTGTACAAAGTGCCACTCCCAGAGGACGTGTCCCGG...TACAAGTGGCTCATCATCAAGATCGTGCTGGCGCTGTTGGGGCTGCTCATGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
CDS-3UTR CCA 90 bp ATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTGTCTTGCCTAGCCGGATaGCGATGTAGGGGTCAGCTT +
Preference number: 4 (lower is better)
Translates to: ILYLEDLGRVSGVFLWSLSCLAG*RCRGQL
Trigger: AAGCTGACCCCTACATCGCCATCCGGCTAGGCAAGA...CAGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp CAACATGAGCAGCCCCAACAGCGCCAGCACGATCTTGATGATGAGCCACTTGTACAGCCACCGTCAGCATaGATTCCATGGGGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: QHEQPQQRQHDLDDEPLVQPPSA*IPWGRR
Trigger: CCTCCTTCCCCATGGAATCCATGCTGACGGTGGCTG...TACAAGTGGCTCATCATCAAGATCGTGCTGGCGCTGTTGGGGCTGCTCATGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
CDS-3UTR CCA 90 bp GATACCTTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCTCACAGCTCCTCAGCTaGGCCTGGAGGCGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: DTFCSFILFKALGTDPWSSQLLS*AWRRWL
Trigger: CAGCCAGCGCCTCCAGGCCCAGCTGAGGAGCTGTGA...GGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAAGGTATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
3UTR CAA 72 bp CACTTGTACCGGGTGCAGATGAGGTACTTGATGGACTaGAGAGGGTTGAGGAACCAGACGAAGGCCGTGTCG +
Preference number: 4 (lower is better)
Translates to: HLYRVQMRYLMD*RGLRNQTKAVS
Trigger: CGACACGGCCTTCGTCTGGTTCCTCAACCCTCTCAAGTCCATCAAGTACCTCATCTGCACCCGGTACAAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
CDS-3UTR TCA 90 bp TTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCTTGGTTGTGCCGTCAGTGGCCTaGTACCGGACCTCCACGCAC +
Preference number: 4 (lower is better)
Translates to: FCSFILFKALGTDPWSLVVPSVA*YRTSTH
Trigger: GTGCGTGGAGGTCCGGTATCAGGCCACTGACGGCAC...AACCAAGGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR TCA 90 bp GCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCAGGTCTTTACATTGGCCATaGGGCTTGTGTTCATACGGG +
Preference number: 4 (lower is better)
Translates to: APQGRWERVQATERKCGRSLHWP*GLCSYG
Trigger: CCCGTATGAACACAAGCCTCATGGCCAATGTAAAGA...CCTGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR TCA 90 bp GATACCTTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCAAGCCTGGTGCGGGATaGGTGGCCCTGGTCCTTGTC +
Preference number: 4 (lower is better)
Translates to: DTFCSFILFKALGTDPWSKPGAG*VALVLV
Trigger: GACAAGGACCAGGGCCACTCATCCCGCACCAGGCTT...GGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAAGGTATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp GCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCAGGTGCTCATCATCCAGATaGAGATGTCGGGAATGCTGT +
Preference number: 4 (lower is better)
Translates to: APQGRWERVQATERKCGRCSSSR*RCRECC
Trigger: ACAGCATTCCCGACATCTTCATCTGGATGATGAGCA...CCTGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp AATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGCGGGCAAAGGGGTCTaGGAGTCCGCTGCTGTCGGC +
Preference number: 4 (lower is better)
Translates to: NFTKASILYLEDLGRVSGAGKGV*ESAAVG
Trigger: GCCGACAGCAGCGGACTCTCAGACCCCTTTGCCCGC...TCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp AGGCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCACCAGAGCCAGAGCTCTaGGTTTTCTTCTTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: RLPRGDGKESKPLKGNAAPEPEL*VFFFFS
Trigger: GGAGAAGAAGAAGAAAACTCAGAGCTCTGGCTCTGG...TGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp AGGAAGAGCCCCAACATGAGCAGCCCCAACAGCGCCAGCACGATCTTGATGATGTCCCAAAGACAGGGTTaGGCTGCTTGGAGATGTAGT +
Preference number: 4 (lower is better)
Translates to: RKSPNMSSPNSASTILMMSQRQG*AAWRCS
Trigger: ACTACATCTCCAAGCAGCTCAACCCTGTCTTTGGGA...CATCATCAAGATCGTGCTGGCGCTGTTGGGGCTGCTCATGTTGGGGCTCTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
CDS-3UTR TCA 90 bp TCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCTCAGAGGGCCCAGTaGAGACGCGGTTGGCCACCT +
Preference number: 4 (lower is better)
Translates to: SLKLQSCTWKTWGGFQESSQRAQ*RRGWPP
Trigger: AGGTGGCCAACCGCGTCTTCACTGGGCCCTCTGAGA...AGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp CAACATGAGCAGCCCCAACAGCGCCAGCACGATCTTGATGATGAGCCACTTGTATGGACTTCTCCCCTGTaGAGAAGTCGTCGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: QHEQPQQRQHDLDDEPLVWTSPL*RSRRPP
Trigger: TGGAGGACGACGACTTCTTCACAGGGGAGAAGTCCA...TACAAGTGGCTCATCATCAAGATCGTGCTGGCGCTGTTGGGGCTGCTCATGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
CDS-3UTR TCA 90 bp TTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCTTGGTTCCCAGATCTGCAGGGTaGGCCGCGCGGGGATCTTGT +
Preference number: 4 (lower is better)
Translates to: FCSFILFKALGTDPWSLVPRSAG*AARGSC
Trigger: ACAAGATCCCCGCGCGGCTCACCCTGCAGATCTGGG...AACCAAGGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp CAACATGAGCAGCCCCAACAGCGCCAGCACGATCTTGATGATGAGCCACTTGTAAAGAGTCCAAGCCACTaGAAGGAAATGCGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: QHEQPQQRQHDLDDEPLVKSPSH*KEMRQG
Trigger: GCCCTGCCGCATTTCCTTTCAGTGGCTTGGACTCTT...TACAAGTGGCTCATCATCAAGATCGTGCTGGCGCTGTTGGGGCTGCTCATGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
CDS-3UTR GCA 90 bp GATACCTTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCAGGAGCCCACCAGGGTaGCACTGCGCAGCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: DTFCSFILFKALGTDPWSRSPPG*HCAAGS
Trigger: AGAACCTGCTGCGCAGTGGCACCCTGGTGGGCTCCT...GGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAAGGTATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR GCA 90 bp ATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTGTCCGAGTCTCGGATCTaGACCTTCATGCGTTTGCAG +
Preference number: 4 (lower is better)
Translates to: ILYLEDLGRVSGVFLWSLSESRI*TFMRLQ
Trigger: CTGCAAACGCATGAAGGTGCAGATCCGAGACTCGGA...CAGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR GCA 90 bp TCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTATGTCGGGAATGCTGTaGTGGGGCTCGTCCGCCAGG +
Preference number: 4 (lower is better)
Translates to: SLKLQSCTWKTWGGFQESMSGML*WGSSAR
Trigger: CCTGGCGGACGAGCCCCAGCACAGCATTCCCGACAT...AGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GATACCTTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCAGCTCCACCTTGGCCTaGACTGTCCAGCCTGCCGAG +
Preference number: 4 (lower is better)
Translates to: DTFCSFILFKALGTDPWSSSTLA*TVQPAE
Trigger: CTCGGCAGGCTGGACAGTGCAGGCCAAGGTGGAGCT...GGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAAGGTATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GATACCTTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCGGTCTGAGAGTCCGCTaGTGTCGGCGGCAAAGAGGC +
Preference number: 4 (lower is better)
Translates to: DTFCSFILFKALGTDPWSGLRVR*CRRQRG
Trigger: GCCTCTTTGCCGCCGACAGCAGCGGACTCTCAGACC...GGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAAGGTATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp AATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTGCAGTACGCCTCGTCTaGCATCTTCACCAGGGGTTT +
Preference number: 4 (lower is better)
Translates to: NPVLGRPGEGFRSLPLEPAVRLV*HLHQGF
Trigger: AAACCCCTGGTGAAGATGGCAGACGAGGCGTACTGC...AGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp TCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTCCTGCTGGTCCAATCTaGAGCAGCTCGAAGGCCGCC +
Preference number: 4 (lower is better)
Translates to: SLKLQSCTWKTWGGFQESPAGPI*SSSKAA
Trigger: GGCGGCCTTCGAGCTGCTGCAGATTGGACCAGCAGG...AGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GTCACATGCCAAAGGAGGCTCTTAGTGTCCTTTTCTCTCGGGGCAGATAGTCTGATGTTCAAGGGCGGGTaGAGCAGCTCGTTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: VTCQRRLLVSFSLGADSLMFKGG*SSSFSG
Trigger: CCCAGAGAACGAGCTGCTGCACCCGCCCTTGAACAT...CAGACTATCTGCCCCGAGAGAAAAGGACACTAAGAGCCTCCTTTGGCATGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426958.1
CDS-3UTR GCA 90 bp TTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCTTGGTTAGGAGGAGCCCCCATTaGACAGCACACGGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: FCSFILFKALGTDPWSLVRRSPH*TAHGSA
Trigger: GGCGCTGCCGTGTGCTGTGCAATGGGGGCTCCTCCT...AACCAAGGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp ATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTGCTCTTTGGCAGCCCTTaGCTTCTCCTTGCCCTTCAT +
Preference number: 4 (lower is better)
Translates to: ILYLEDLGRVSGVFLWSLLFGSP*LLLALH
Trigger: ATGAAGGGCAAGGAGAAGGCAAGGGCTGCCAAAGAG...CAGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp TTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCTTGGTTAGTAGGTCTGGGCGATaGCGCAGGTGGCGCGGTGCT +
Preference number: 4 (lower is better)
Translates to: FCSFILFKALGTDPWSLVSRSGR*RRWRGA
Trigger: AGCACCGCGCCACCTGCGGCATCGCCCAGACCTACT...AACCAAGGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp AATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTCCACTTTGCCGTCTTTaGAGAGGCGGGTCAGGATCT +
Preference number: 4 (lower is better)
Translates to: NPVLGRPGEGFRSLPLEPPLCRL*RGGSGS
Trigger: AGATCCTGACCCGCCTCTGCAAAGACGGCAAAGTGG...AGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp TTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCTTGGTTGGCCTCGTCTCCACATaGTCTGGCACCAGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: FCSFILFKALGTDPWSLVGLVST*SGTRRQ
Trigger: CTGCCGCCTGGTGCCAGAGCATGTGGAGACGAGGCC...AACCAAGGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp AGGCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCACCTTTGACGCGCTTTTaGTTGAAGATGGACACGAGG +
Preference number: 4 (lower is better)
Translates to: RLPRGDGKESKPLKGNAAPLTRF*LKMDTR
Trigger: CCTCGTGTCCATCTTCAAGCAAAAGCGCGTCAAAGG...TGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp TCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTGGGTCTGGCCCCTGCTaGGGATCAAAGACCGGTGCT +
Preference number: 4 (lower is better)
Translates to: SLKLQSCTWKTWGGFQESGSGPC*GSKTGA
Trigger: AGCACCGGTCTTTGATCCGCAGCAGGGGCCAGACCC...AGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GATACCTTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCGCAGGGTCTGGCCCCTaGTGCGGATCAAAGACCGGT +
Preference number: 4 (lower is better)
Translates to: DTFCSFILFKALGTDPWSAGSGP*CGSKTG
Trigger: ACCGGTCTTTGATCCGCAGCAGGGGCCAGACCCTGC...GGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAAGGTATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp TCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCTCCGAGATGGGCGTaGCCTGCTCCACCTGCACCT +
Preference number: 4 (lower is better)
Translates to: SLKLQSCTWKTWGGFQESSPRWA*PAPPAP
Trigger: AGGTGCAGGTGGAGCAGGCCACGCCCATCTCGGAGA...AGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CCA 90 bp TTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCTTGGTTGACCAGGCTGACGGGTaGGAAGGCATGCAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: FCSFILFKALGTDPWSLVDQADG*EGMQAQ
Trigger: CTGGGCCTGCATGCCTTCCCACCCGTCAGCCTGGTC...AACCAAGGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp CAACATGAGCAGCCCCAACAGCGCCAGCACGATCTTGATGATGAGCCACTTGTAGCATCTGGTCCCAGGTaGGACACAGGGTCTCATTCA +
Preference number: 4 (lower is better)
Translates to: QHEQPQQRQHDLDDEPLVASGPR*DTGSHS
Trigger: TGAATGAGACCCTGTGTCCCACCTGGGACCAGATGC...TACAAGTGGCTCATCATCAAGATCGTGCTGGCGCTGTTGGGGCTGCTCATGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
CDS-3UTR CCA 90 bp GTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGGGGCCGAGCGGTCTaGGGGCCGGTAGATGAAGCG +
Preference number: 4 (lower is better)
Translates to: VNFTKASILYLEDLGRVSGGRAV*GPVDEA
Trigger: CGCTTCATCTACCGGCCCCCAGACCGCTCGGCCCCC...TGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp TCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTCCACAACCTCCCCTGTaGAGTGAGAGGAGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: SLKLQSCTWKTWGGFQESPQPPL*SERRSP
Trigger: GGGGCTCCTCCTCTCACTCCACAGGGGAGGTTGTGG...AGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp CAACATGAGCAGCCCCAACAGCGCCAGCACGATCTTGATGATGAGCCACTTGTACACGTCCTCTGGGAGTaGCACTTTGTACACGCAGAG +
Preference number: 4 (lower is better)
Translates to: QHEQPQQRQHDLDDEPLVHVLWE*HFVHAE
Trigger: CTCTGCGTGTACAAAGTGCCACTCCCAGAGGACGTG...TACAAGTGGCTCATCATCAAGATCGTGCTGGCGCTGTTGGGGCTGCTCATGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
CDS-3UTR CCA 90 bp AATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTTCTGGCTGGGCTTCATaGGGTCCCGCCAGATATTGT +
Preference number: 4 (lower is better)
Translates to: NPVLGRPGEGFRSLPLEPSGWAS*GPARYC
Trigger: ACAATATCTGGCGGGACCCCATGAAGCCCAGCCAGA...AGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp TCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTAGGCGGGTCAGGATCTaGCTGGGCTTCATGGGGTCC +
Preference number: 4 (lower is better)
Translates to: SLKLQSCTWKTWGGFQESRRVRI*LGFMGS
Trigger: GGACCCCATGAAGCCCAGCCAGATCCTGACCCGCCT...AGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp AATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGACGGCCAGGAGGCCACTaGGCTCAGGCCCCGAGGATT +
Preference number: 4 (lower is better)
Translates to: NFTKASILYLEDLGRVSGRPGGH*AQAPRI
Trigger: AATCCTCGGGGCCTGAGCCCAGTGGCCTCCTGGCCG...TCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
CDS-3UTR CCA 90 bp GTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGCGGCTGGCGGGAGCTaGCGGCCTTCATGCCCCAAG +
Preference number: 4 (lower is better)
Translates to: VNFTKASILYLEDLGRVSAAGGS*RPSCPK
Trigger: CTTGGGGCATGAAGGCCGCCAGCTCCCGCCAGCCGC...TGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp AGGCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCATGTACTTGGAAGACCTaGGGAGGGTTTCAGGAGTCT +
Preference number: 4 (lower is better)
Translates to: RLPRGDGKESKPLKGNAACTWKT*GGFQES
Trigger: AGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACA...TGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCAGGCTGGGCACTGACCCATaGTCCTTGGTTAATTTCACT +
Preference number: 4 (lower is better)
Translates to: APQGRWERVQATERKCGRLGTDP*SLVNFT
Trigger: AGTGAAATTAACCAAGGACCATGGGTCAGTGCCCAG...CCTGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp TCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTGGACAGGCGACCCCCTaGGAAGTGAGAGGAGCCAAG +
Preference number: 4 (lower is better)
Translates to: SLKLQSCTWKTWGGFQESGQATP*EVRGAK
Trigger: CTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCC...AGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GATACCTTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCGGACAGGCGACCCCCTaGGAAGTGAGAGGAGCCAAG +
Preference number: 4 (lower is better)
Translates to: DTFCSFILFKALGTDPWSGQATP*EVRGAK
Trigger: CTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCC...GGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAAGGTATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp AGGAGGGAGCTGTTTGGACACACAATCAAGCTCAGCCCCCGACAGTCACATGCCTCGGGGCAGATAGTCTaGTTCACAGGATGTGTCACA +
Preference number: 4 (lower is better)
Translates to: RRELFGHTIKLSPRQSHASGQIV*FTGCVT
Trigger: TGTGACACATCCTGTGAACCAGACTATCTGCCCCGA...GGCATGTGACTGTCGGGGGCTGAGCTTGATTGTGTGTCCAAACAGCTCCCTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426958.1
3UTR CAA 72 bp CCCAACAGCGCCAGCACGATCTTGATGATGAGCCACTaGTACCGGGTGCAGATGAGGTACTTGATGGACTTG +
Preference number: 4 (lower is better)
Translates to: PNSASTILMMSH*YRVQMRYLMDL
Trigger: CAAGTCCATCAAGTACCTCATCTGCACCCGGTACAAGTGGCTCATCATCAAGATCGTGCTGGCGCTGTTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
CDS-3UTR TCA 90 bp TCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTCCCTCGTTCAGGTCCTaGTGCTCATCCAGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: SLKLQSCTWKTWGGFQESPSFRS*CSSSSV
Trigger: CACGCTGCTGGATGAGCATCAGGACCTGAACGAGGG...AGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR TCA 90 bp GATACCTTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCTCTCCGGTCGATCATTaGGGCCTCCAGGAAGGCTCC +
Preference number: 4 (lower is better)
Translates to: DTFCSFILFKALGTDPWSSPVDH*GLQEGS
Trigger: GGAGCCTTCCTGGAGGCCTCAATGATCGACCGGAGA...GGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAAGGTATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR TCA 90 bp GATACCTTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCCGAAGGTCCGGCCCATaGAGTCAGCTTTGCCCATGG +
Preference number: 4 (lower is better)
Translates to: DTFCSFILFKALGTDPWSRRSGP*SQLCPW
Trigger: CCATGGGCAAAGCTGACTTCATGGGCCGGACCTTCG...GGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAAGGTATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp AATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGACCACTCGGTACTTGCTaGGCACGGGCCGGATGCCCA +
Preference number: 4 (lower is better)
Translates to: NFTKASILYLEDLGRVSGPLGTC*ARAGCP
Trigger: TGGGCATCCGGCCCGTGCTCAGCAAGTACCGAGTGG...TCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp CAACATGAGCAGCCCCAACAGCGCCAGCACGATCTTGATGATGAGCCACTTGTACAGCCACATCCACCTTaGCAACAGCTTCAGAAGTCG +
Preference number: 4 (lower is better)
Translates to: QHEQPQQRQHDLDDEPLVQPHPP*QQLQKS
Trigger: CGACTTCTGAAGCTGTTGTCAAGGTGGATGTGGCTG...TACAAGTGGCTCATCATCAAGATCGTGCTGGCGCTGTTGGGGCTGCTCATGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
CDS-3UTR TCA 90 bp TTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCTTGGTTCGCAGAGGGAGCCCTTaGAGCGTCCCACAATGCGCT +
Preference number: 4 (lower is better)
Translates to: FCSFILFKALGTDPWSLVRRGSP*SVPQCA
Trigger: AGCGCATTGTGGGACGCTTCAAGGGCTCCCTCTGCG...AACCAAGGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp ATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTGTCCCAAAGACAGGGTTaGGCTGCTTGGAGATGTAGT +
Preference number: 4 (lower is better)
Translates to: ILYLEDLGRVSGVFLWSLSQRQG*AAWRCS
Trigger: ACTACATCTCCAAGCAGCTCAACCCTGTCTTTGGGA...CAGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp CAACATGAGCAGCCCCAACAGCGCCAGCACGATCTTGATGATGAGCCACTTGTATCTTGGTTTCCCCAATaGGGTCATCAGTGCCCACCA +
Preference number: 4 (lower is better)
Translates to: QHEQPQQRQHDLDDEPLVSWFPQ*GHQCPP
Trigger: TGGTGGGCACTGATGACCTCATTGGGGAAACCAAGA...TACAAGTGGCTCATCATCAAGATCGTGCTGGCGCTGTTGGGGCTGCTCATGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
CDS-3UTR TCA 90 bp GACCCATGGTCCTTGGTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCCGGCTTGTCGGGGTTaGGCAGCGGCCTCGTCTCCA +
Preference number: 4 (lower is better)
Translates to: DPWSLVNFTKASILYLEDPACRG*AAASSP
Trigger: TGGAGACGAGGCCGCTGCTCAACCCCGACAAGCCGG...GTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAACCAAGGACCATGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp TTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCTTGGTTAGCTCCACCTTGGCCTaGACTGTCCAGCCTGCCGAG +
Preference number: 4 (lower is better)
Translates to: FCSFILFKALGTDPWSLVSSTLA*TVQPAE
Trigger: CTCGGCAGGCTGGACAGTGCAGGCCAAGGTGGAGCT...AACCAAGGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp TTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCTTGGTTGGTCTGAGAGTCCGCTaGTGTCGGCGGCAAAGAGGC +
Preference number: 4 (lower is better)
Translates to: FCSFILFKALGTDPWSLVGLRVR*CRRQRG
Trigger: GCCTCTTTGCCGCCGACAGCAGCGGACTCTCAGACC...AACCAAGGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GATACCTTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCTGGATCAGGGACGACTaGACCCCCTTCCCTGCACAC +
Preference number: 4 (lower is better)
Translates to: DTFCSFILFKALGTDPWSWIRDD*TPFPAH
Trigger: GTGTGCAGGGAAGGGGGTGCAGTCGTCCCTGATCCA...GGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAAGGTATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp TCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTGCCAACAGCGCCACATaGTCGTCTGTGGGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: SLKLQSCTWKTWGGFQESANSAT*SSVGFL
Trigger: GAGGAAGCCCACAGACGAGCATGTGGCGCTGTTGGC...AGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp TTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCTTGGTTGGGTCTGGCCCCTGCTaGGGATCAAAGACCGGTGCT +
Preference number: 4 (lower is better)
Translates to: FCSFILFKALGTDPWSLVGSGPC*GSKTGA
Trigger: AGCACCGGTCTTTGATCCGCAGCAGGGGCCAGACCC...AACCAAGGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp TTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCTTGGTTGCAGGGTCTGGCCCCTaGTGCGGATCAAAGACCGGT +
Preference number: 4 (lower is better)
Translates to: FCSFILFKALGTDPWSLVAGSGP*CGSKTG
Trigger: ACCGGTCTTTGATCCGCAGCAGGGGCCAGACCCTGC...AACCAAGGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGCTGGGCCGGGAGCCTaGGAGCAGTCCATCCGTCTC +
Preference number: 4 (lower is better)
Translates to: VNFTKASILYLEDLGRVSAGPGA*EQSIRL
Trigger: GAGACGGATGGACTGCTCCCAGGCTCCCGGCCCAGC...TGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CCA 90 bp AGGCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCAACATCCGGAGAGACATaGAAGTCGAAGACGAAGTAC +
Preference number: 4 (lower is better)
Translates to: RLPRGDGKESKPLKGNAATSGET*KSKTKY
Trigger: GTACTTCGTCTTCGACTTCCATGTCTCTCCGGATGT...TGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CCA 90 bp TTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCTTGGTTAAGAGGCTGCGGGCCTaGTACATGTGCGCTCGGAGC +
Preference number: 4 (lower is better)
Translates to: FCSFILFKALGTDPWSLVKRLRA*YMCARS
Trigger: GCTCCGAGCGCACATGTACCAGGCCCGCAGCCTCTT...AACCAAGGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GACCCATGGTCCTTGGTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTCGATGTCCACCCGTaGCCGGTCCACCTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: DPWSLVNFTKASILYLEDLDVHP*PVHLGQ
Trigger: CTGGCCCAGGTGGACCGGCCACGGGTGGACATCGAG...GTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAACCAAGGACCATGGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GATACCTTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCCAGCATGCTCTCGTCTaGCTCCTCCTCCTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: DTFCSFILFKALGTDPWSQHALV*LLLLWL
Trigger: GAGCCAGAGGAGGAGGAGCCAGACGAGAGCATGCTG...GGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAAGGTATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp AGGCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCACCTTCATGGTGTCAATaGAGGCAAAGTACTTGGACC +
Preference number: 4 (lower is better)
Translates to: RLPRGDGKESKPLKGNAAPSWCQ*RQSTWT
Trigger: GGTCCAAGTACTTTGCCTCCATTGACACCATGAAGG...TGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp TCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTGCGCTCCTCCTCGGTaGAGCCATCCTCATCATCCC +
Preference number: 4 (lower is better)
Translates to: SLKLQSCTWKTWGGFQESCAPPR*SHPHHP
Trigger: GGGATGATGAGGATGGCTCCACCGAGGAGGAGCGCA...AGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GATACCTTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCGGAACATGCCGTAGGTaGAGTCGTAGCCGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: DTFCSFILFKALGTDPWSGTCRR*SRSRLP
Trigger: GGGAAGCCGGCTACGACTCCACCTACGGCATGTTCC...GGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAAGGTATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp TCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTAGGCGTCCCAGGGGCTaGCATGTCCATGGGGAACAT +
Preference number: 4 (lower is better)
Translates to: SLKLQSCTWKTWGGFQESRRPRG*HVHGEH
Trigger: ATGTTCCCCATGGACATGCCAGCCCCTGGGACGCCT...AGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp AATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTGCAGCTCGTACTTCTTaGGCTTCCGAGGTGAGATGT +
Preference number: 4 (lower is better)
Translates to: NPVLGRPGEGFRSLPLEPAARTS*ASEVRC
Trigger: ACATCTCACCTCGGAAGCCCAAGAAGTACGAGCTGC...AGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp TTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCTTGGTTTGCTTGTCCTCCTGCTaGCCCTTCAGCCACCCCCTC +
Preference number: 4 (lower is better)
Translates to: FCSFILFKALGTDPWSLVCLSSC*PFSHPL
Trigger: GAGGGGGTGGCTGAAGGGCCAGCAGGAGGACAAGCA...AACCAAGGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp TCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCGTGTCGGGCCGGTTaGGTTTCTCTAGGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: SLKLQSCTWKTWGGFQESSCRAG*VSLGGQ
Trigger: CTGACCCCCTAGAGAAACCCAACCGGCCCGACACGA...AGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
CDS-3UTR CCA 90 bp GATACCTTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCCCAAGGCATGAAGAGTaGACGCTGGGCTCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: DTFCSFILFKALGTDPWSPRHEE*TLGSSG
Trigger: GCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGG...GGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAAGGTATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp TTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCTTGGTTGGCGCCTCAGCCAGGTaGGGCAAGAGAGACCCATTC +
Preference number: 4 (lower is better)
Translates to: FCSFILFKALGTDPWSLVGASAR*GKRDPF
Trigger: GAATGGGTCTCTCTTGCCCCACCTGGCTGAGGCGCC...AACCAAGGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp TGGAAACCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGCTGACCCATGGTCCTTaGTTAATTTCACTAAAGCTT +
Preference number: 4 (lower is better)
Translates to: WKPTGRTGDPLGSERSQVLTHGP*LISLKL
Trigger: AAGCTTTAGTGAAATTAACCAAGGACCATGGGTCAG...CACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGGTTTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp AATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGATCACAGCTCCTCAGCTaGGCCTGGAGGCGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: NFTKASILYLEDLGRVSGSQLLS*AWRRWL
Trigger: CAGCCAGCGCCTCCAGGCCCAGCTGAGGAGCTGTGA...TCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp AATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAAAGCCTGGTGCGGGATaGGTGGCCCTGGTCCTTGTC +
Preference number: 4 (lower is better)
Translates to: NFTKASILYLEDLGRVSGKPGAG*VALVLV
Trigger: GACAAGGACCAGGGCCACTCATCCCGCACCAGGCTT...TCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp GACCCATGGTCCTTGGTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCCCTCATGCAGGACTTaGGGCGCTCCCGGTCAAGCC +
Preference number: 4 (lower is better)
Translates to: DPWSLVNFTKASILYLEDPSCRT*GAPGQA
Trigger: GGCTTGACCGGGAGCGCCTCAAGTCCTGCATGAGGG...GTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAACCAAGGACCATGGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp TTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCTTGGTTCCTTGCGCTGTTTGCTaGGGCCCAGCCACAGGTACA +
Preference number: 4 (lower is better)
Translates to: FCSFILFKALGTDPWSLVPCAVC*GPATGT
Trigger: TGTACCTGTGGCTGGGCCTCAGCAAACAGCGCAAGG...AACCAAGGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp TCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTCTCGGACCAGCACATTaGTGGGGTCATTGCTCGGGA +
Preference number: 4 (lower is better)
Translates to: SLKLQSCTWKTWGGFQESLGPAH*WGHCSG
Trigger: TCCCGAGCAATGACCCCATCAATGTGCTGGTCCGAG...AGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp AATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTTCCCAAAGACAGGGTTaGGCTGCTTGGAGATGTAGT +
Preference number: 4 (lower is better)
Translates to: NPVLGRPGEGFRSLPLEPSQRQG*AAWRCS
Trigger: ACTACATCTCCAAGCAGCTCAACCCTGTCTTTGGGA...AGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp TCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTCCCCAAGGAGCTTTTTaGCCATGTAGCCAGGGAGGC +
Preference number: 4 (lower is better)
Translates to: SLKLQSCTWKTWGGFQESPQGAF*PCSQGG
Trigger: GCCTCCCTGGCTACATGGTCAAAAAGCTCCTTGGGG...AGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GATACCTTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCAACTGGTGCTCTGGCTaGGAGTACACGGTTCCCACG +
Preference number: 4 (lower is better)
Translates to: DTFCSFILFKALGTDPWSNWCSG*EYTVPT
Trigger: CGTGGGAACCGTGTACTCGCAGCCAGAGCACCAGTT...GGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAAGGTATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR GCA 90 bp AATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTTCTGCACTGAAGTCTTaGCCTTCTGGCCAGCAAAGA +
Preference number: 4 (lower is better)
Translates to: NPVLGRPGEGFRSLPLEPSALKS*PSGQQR
Trigger: TCTTTGCTGGCCAGAAGGGCAAGACTTCAGTGCAGA...AGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR GCA 90 bp CAACATGAGCAGCCCCAACAGCGCCAGCACGATCTTGATGATGAGCCACTTGTATCTGTAAAGACGACCTaGTCATTCCACAGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: QHEQPQQRQHDLDDEPLVSVKTT*SFHRGS
Trigger: TGAGCCCCTGTGGAATGAGCAGGTCGTCTTTACAGA...TACAAGTGGCTCATCATCAAGATCGTGCTGGCGCTGTTGGGGCTGCTCATGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272371.7
CDS-3UTR GCA 90 bp TCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTAGCATCCTGGCCTGCTaGCCCATGTTTTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: SLKLQSCTWKTWGGFQESSILAC*PMFSSS
Trigger: GGAGCTGGAAAACATGGGGCAGCAGGCCAGGATGCT...AGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp TTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCTTGGTTCGCAGCATCCTGGCCTaGTGCCCCATGTTTTCCAGC +
Preference number: 4 (lower is better)
Translates to: FCSFILFKALGTDPWSLVRSILA*CPMFSS
Trigger: GCTGGAAAACATGGGGCAGCAGGCCAGGATGCTGCG...AACCAAGGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GACCCATGGTCCTTGGTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGCACTGTCCAGCCTaGCGAGCCGAAGCCCCGCTT +
Preference number: 4 (lower is better)
Translates to: DPWSLVNFTKASILYLEDLHCPA*RAEAPL
Trigger: AAGCGGGGCTTCGGCTCGGCAGGCTGGACAGTGCAG...GTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAACCAAGGACCATGGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GACCCATGGTCCTTGGTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCGGCGGCAAAGAGGCTaGGGGCCTGGTACATGTGCG +
Preference number: 4 (lower is better)
Translates to: DPWSLVNFTKASILYLEDRRQRG*GPGTCA
Trigger: CGCACATGTACCAGGCCCGCAGCCTCTTTGCCGCCG...GTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAACCAAGGACCATGGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GATACCTTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCCAGGTCAGCCTTCCCTaGTGGTCCAATCTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: DTFCSFILFKALGTDPWSQVSLP*WSNLQQ
Trigger: CTGCTGCAGATTGGACCAGCAGGGAAGGCTGACCTG...GGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAAGGTATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GATACCTTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCATGTTCAAGGGCGGGTaGAGCAGCTCGTTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: DTFCSFILFKALGTDPWSMFKGG*SSSFSG
Trigger: CCCAGAGAACGAGCTGCTGCACCCGCCCTTGAACAT...GGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAAGGTATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAAGGAGGAGCCCCCATTaGACAGCACACGGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: VNFTKASILYLEDLGRVSRRSPH*TAHGSA
Trigger: GGCGCTGCCGTGTGCTGTGCAATGGGGGCTCCTCCT...TGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp AATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGACTGCTTGGCTGTCTTTaGGCCCCGCGGGAACCGGTT +
Preference number: 4 (lower is better)
Translates to: NFTKASILYLEDLGRVSGLLGCL*APREPV
Trigger: AACCGGTTCCCGCGGGGCGCAAAGACAGCCAAGCAG...TCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGGGGTCAGGTTCATTaGGGGCCAGGCCCACTGGGT +
Preference number: 4 (lower is better)
Translates to: VNFTKASILYLEDLGRVSGGQVH*GPGPLG
Trigger: ACCCAGTGGGCCTGGCCCGCAATGAACCTGACCCCC...TGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp TTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCTTGGTTAAGACCGGTGCTATCTaGAGGGGTCACGGCGGGGAT +
Preference number: 4 (lower is better)
Translates to: FCSFILFKALGTDPWSLVKTGAI*RGHGGD
Trigger: ATCCCCGCCGTGACCCCTGCAGATAGCACCGGTCTT...AACCAAGGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp TCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTCCCAGCCTCCCCAAATaGCTCCTCCCTGTTGATCAG +
Preference number: 4 (lower is better)
Translates to: SLKLQSCTWKTWGGFQESPSLPK*LLPVDQ
Trigger: CTGATCAACAGGGAGGAGGCATTTGGGGAGGCTGGG...AGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402415.8
CDS-3UTR CCA 90 bp GATACCTTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCTTCTGTCGATGCTGCTaGCCACCGGCCACCGAAATG +
Preference number: 4 (lower is better)
Translates to: DTFCSFILFKALGTDPWSFCRCC*PPATEM
Trigger: CATTTCGGTGGCCGGTGGCCAGCAGCATCGACAGAA...GGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAAGGTATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CCA 90 bp GATACCTTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCCACCGCCGGTTCATCTaGTCTTTGGGGCTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: DTFCSFILFKALGTDPWSHRRFI*SLGLLL
Trigger: AAGGAGGAGCCCCAAAGACCAGATGAACCGGCGGTG...GGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAAGGTATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CCA 90 bp GATACCTTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCGGGCCGCCCAGCACTTaGCTCCATCTTAATGTCTGG +
Preference number: 4 (lower is better)
Translates to: DTFCSFILFKALGTDPWSGPPST*LHLNVW
Trigger: CCAGACATTAAGATGGAGCCAAGTGCTGGGCGGCCC...GGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAAGGTATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CCA 90 bp TCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTAGAAGAGCAGGTCCTTaGAGGGCACACGGGCATAGG +
Preference number: 4 (lower is better)
Translates to: SLKLQSCTWKTWGGFQESRRAGP*RAHGHR
Trigger: CCTATGCCCGTGTGCCCTCCAAGGACCTGCTCTTCT...AGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp TCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTGAAGCCCCGCTTCCCTaGCAGCTTAAGGAAGAGCGT +
Preference number: 4 (lower is better)
Translates to: SLKLQSCTWKTWGGFQESEAPLP*QLKEER
Trigger: ACGCTCTTCCTTAAGCTGCCAGGGAAGCGGGGCTTC...AGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GATACCTTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCATGTGCGCTCGGAGCTaGAACGCCTGCTTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: DTFCSFILFKALGTDPWSMCARS*NACFLV
Trigger: CACCAAGAAGCAGGCGTTCCAGCTCCGAGCGCACAT...GGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAAGGTATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp TCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTATGTGCGCTCGGAGCTaGAACGCCTGCTTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: SLKLQSCTWKTWGGFQESMCARS*NACFLV
Trigger: CACCAAGAAGCAGGCGTTCCAGCTCCGAGCGCACAT...AGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GACCCATGGTCCTTGGTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACAGGTGGGAAGCGGGGTaGGCAGTACGCCTCGTCTGC +
Preference number: 4 (lower is better)
Translates to: DPWSLVNFTKASILYLEDRWEAG*AVRLVC
Trigger: GCAGACGAGGCGTACTGCCCACCCCGCTTCCCACCT...GTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAACCAAGGACCATGGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp AGGCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCAGAAGTTGCTCCTTCATaGTGTCAATGGAGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: RLPRGDGKESKPLKGNAAEVAPS*CQWRQS
Trigger: ACTTTGCCTCCATTGACACCATGAAGGAGCAACTTC...TGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp CAACATGAGCAGCCCCAACAGCGCCAGCACGATCTTGATGATGAGCCACTTGTATCTTCTTCTCCTCTTTaGCAGCCCTTGCCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: QHEQPQQRQHDLDDEPLVSSSPL*QPLPSP
Trigger: AGGAGAAGGCAAGGGCTGCCAAAGAGGAGAAGAAGA...TACAAGTGGCTCATCATCAAGATCGTGCTGGCGCTGTTGGGGCTGCTCATGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
CDS-3UTR CCA 90 bp GATACCTTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCCCGGGACACGTCCTCTaGGAGTGGCACTTTGTACAC +
Preference number: 4 (lower is better)
Translates to: DTFCSFILFKALGTDPWSPGHVL*EWHFVH
Trigger: GTGTACAAAGTGCCACTCCCAGAGGACGTGTCCCGG...GGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAAGGTATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GACCCATGGTCCTTGGTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACGGGCGATGCCGCAGGTaGCGCGGTGCTTGCTGTAGA +
Preference number: 4 (lower is better)
Translates to: DPWSLVNFTKASILYLEDGRCRR*RGACCR
Trigger: TCTACAGCAAGCACCGCGCCACCTGCGGCATCGCCC...GTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAACCAAGGACCATGGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp TCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCGTCAGCGGAGAAGTaGTCCGCATCCCAGATCTGC +
Preference number: 4 (lower is better)
Translates to: SLKLQSCTWKTWGGFQESSSAEK*SASQIC
Trigger: GCAGATCTGGGATGCGGACCACTTCTCCGCTGACGA...AGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp TCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTCGGTGGCCATCTCCATaGTGCACTGCTTGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: SLKLQSCTWKTWGGFQESRWPSP*CTAWLS
Trigger: AGACAGCCAAGCAGTGCACCATGGAGATGGCCACCG...AGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp AATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGGCGCCTCAGCCAGGTaGGGCAAGAGAGACCCATTC +
Preference number: 4 (lower is better)
Translates to: NFTKASILYLEDLGRVSGGASAR*GKRDPF
Trigger: GAATGGGTCTCTCTTGCCCCACCTGGCTGAGGCGCC...TCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp AATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGACAGAAGCAGCCGCGCTaGGACTTGTGGGCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: NFTKASILYLEDLGRVSGQKQPR*DLWAGS
Trigger: AGACCCTGCCCACAAGTCCCAGCGCGGCTGCTTCTG...TCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAAGGGTGTGCCCGGGATaGGGAGTCCCCTCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: VNFTKASILYLEDLGRVSRVCPG*GVPSAA
Trigger: AGCAGCAGAGGGGACTCCCCATCCCGGGCACACCCT...TGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp AATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGACCGTGTCGGGCCGGTTaGGTTTCTCTAGGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: NFTKASILYLEDLGRVSGPCRAG*VSLGGQ
Trigger: CTGACCCCCTAGAGAAACCCAACCGGCCCGACACGG...TCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339598.8
ENST00000403946.7
CDS-3UTR TCA 90 bp GTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAAAGCCTGGTGCGGGATaGGTGGCCCTGGTCCTTGTC +
Preference number: 4 (lower is better)
Translates to: VNFTKASILYLEDLGRVSKPGAG*VALVLV
Trigger: GACAAGGACCAGGGCCACTCATCCCGCACCAGGCTT...TGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp AATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGACCTTGCGCTGTTTGCTaGGGCCCAGCCACAGGTACA +
Preference number: 4 (lower is better)
Translates to: NFTKASILYLEDLGRVSGPCAVC*GPATGT
Trigger: TGTACCTGTGGCTGGGCCTCAGCAAACAGCGCAAGG...TCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp AATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGATGGTGTAGACCAGGCTaGCGGGTGGGAAGGCATGCA +
Preference number: 4 (lower is better)
Translates to: NFTKASILYLEDLGRVSGWCRPG*RVGRHA
Trigger: TGCATGCCTTCCCACCCGTCAGCCTGGTCTACACCA...TCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp GTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCATCTCAGAGGGCCCAGTaGAGACGCGGTTGGCCACCT +
Preference number: 4 (lower is better)
Translates to: VNFTKASILYLEDLGRVSSQRAQ*RRGWPP
Trigger: AGGTGGCCAACCGCGTCTTCACTGGGCCCTCTGAGA...TGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp GACCCATGGTCCTTGGTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTTGGGCTTCCGAGGTaGGATGTCCAGAGGCGTCCC +
Preference number: 4 (lower is better)
Translates to: DPWSLVNFTKASILYLEDLGLPR*DVQRRP
Trigger: GGGACGCCTCTGGACATCTCACCTCGGAAGCCCAAG...GTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAACCAAGGACCATGGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp TCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTGGACTTCTCCCCTGTaGAGAAGTCGTCGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: SLKLQSCTWKTWGGFQESWTSPL*RSRRPP
Trigger: TGGAGGACGACGACTTCTTCACAGGGGAGAAGTCCA...AGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp TCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTAAGAGTCCAAGCCACTaGAAGGAAATGCGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: SLKLQSCTWKTWGGFQESKSPSH*KEMRQG
Trigger: GCCCTGCCGCATTTCCTTTCAGTGGCTTGGACTCTT...AGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp GTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAAGTCTGTGGCTCTGGTaGGCTCACAGGGCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: VNFTKASILYLEDLGRVSSLWLW*AHRAWA
Trigger: TGCCCAGGCCCTGTGAGCTCACCAGAGCCACAGACT...TGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
CDS-3UTR GCA 90 bp AATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGACCACCAGGGTGCCACTaGGCAGCAGGTTCTTGGAGT +
Preference number: 4 (lower is better)
Translates to: NFTKASILYLEDLGRVSGPPGCH*AAGSWS
Trigger: ACTCCAAGAACCTGCTGCGCAGTGGCACCCTGGTGG...TCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR GCA 90 bp GACCCATGGTCCTTGGTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACGTGGCCTGCTCCACCTaGACCTCTGTGGAGCTGGTG +
Preference number: 4 (lower is better)
Translates to: DPWSLVNFTKASILYLEDVACST*TSVELV
Trigger: CACCAGCTCCACAGAGGTGCAGGTGGAGCAGGCCAC...GTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAACCAAGGACCATGGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR GCA 90 bp AATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGACGCAGCATCCTGGCCTaGTGCCCCATGTTTTCCAGC +
Preference number: 4 (lower is better)
Translates to: NFTKASILYLEDLGRVSGRSILA*CPMFSS
Trigger: GCTGGAAAACATGGGGCAGCAGGCCAGGATGCTGCG...TCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GACCCATGGTCCTTGGTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACATGTCGGGAATGCTGTaGTGGGGCTCGTCCGCCAGG +
Preference number: 4 (lower is better)
Translates to: DPWSLVNFTKASILYLEDMSGML*WGSSAR
Trigger: CCTGGCGGACGAGCCCCAGCACAGCATTCCCGACAT...GTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAACCAAGGACCATGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp TTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCTTGGTTCGCGGATGTCAGTCTTaGCTAGCCGGATGGCGATGT +
Preference number: 4 (lower is better)
Translates to: FCSFILFKALGTDPWSLVRGCQS*LAGWRC
Trigger: ACATCGCCATCCGGCTAGGCAAGACTGACATCCGCG...AACCAAGGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GACCCATGGTCCTTGGTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACTCCTGCTTGTCCTCCTaGTGGCCCTTCAGCCACCCC +
Preference number: 4 (lower is better)
Translates to: DPWSLVNFTKASILYLEDSCLSS*WPFSHP
Trigger: GGGGTGGCTGAAGGGCCAGCAGGAGGACAAGCAGGA...GTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAACCAAGGACCATGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCACTGCTTGGCTGTCTTTaGGCCCCGCGGGAACCGGTT +
Preference number: 4 (lower is better)
Translates to: VNFTKASILYLEDLGRVSLLGCL*APREPV
Trigger: AACCGGTTCCCGCGGGGCGCAAAGACAGCCAAGCAG...TGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGCAGGGTCTGGCCCCTaGTGCGGATCAAAGACCGGT +
Preference number: 4 (lower is better)
Translates to: VNFTKASILYLEDLGRVSAGSGP*CGSKTG
Trigger: ACCGGTCTTTGATCCGCAGCAGGGGCCAGACCCTGC...TGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp TTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCTTGGTTATGGGGAGTCCCCTCTaGTGCTTCTCACAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: FCSFILFKALGTDPWSLVMGSPL*CFSQLL
Trigger: GAGGAGCTGTGAGAAGCAGCAGAGGGGACTCCCCAT...AACCAAGGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp TTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCTTGGTTTTCTGTCGATGCTGCTaGCCACCGGCCACCGAAATG +
Preference number: 4 (lower is better)
Translates to: FCSFILFKALGTDPWSLVFCRCC*PPATEM
Trigger: CATTTCGGTGGCCGGTGGCCAGCAGCATCGACAGAA...AACCAAGGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CCA 90 bp GATACCTTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCTTTTGCCGAGCTTCATaGCGGAGAACACGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: DTFCSFILFKALGTDPWSFCRAS*RRTRSS
Trigger: GGAGGAGCGTGTTCTCCGCCATGAAGCTCGGCAAAA...GGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAAGGTATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CCA 90 bp TTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCTTGGTTCACCGCCGGTTCATCTaGTCTTTGGGGCTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: FCSFILFKALGTDPWSLVHRRFI*SLGLLL
Trigger: AAGGAGGAGCCCCAAAGACCAGATGAACCGGCGGTG...AACCAAGGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CCA 90 bp AGGAAGAGCCCCAACATGAGCAGCCCCAACAGCGCCAGCACGATCTTGATGATGCTCCATCTTAATGTCTaGCTTAGATCGCTTGTTGGA +
Preference number: 4 (lower is better)
Translates to: RKSPNMSSPNSASTILMMLHLNV*LRSLVG
Trigger: TCCAACAAGCGATCTAAGCCAGACATTAAGATGGAG...CATCATCAAGATCGTGCTGGCGCTGTTGGGGCTGCTCATGTTGGGGCTCTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272371.7
CDS-3UTR CCA 90 bp TCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTCGGGGTCAGACAGGATaGCCCACTTGTGATGGAACT +
Preference number: 4 (lower is better)
Translates to: SLKLQSCTWKTWGGFQESRGQTG*PTCDGT
Trigger: AGTTCCATCACAAGTGGGCCATCCTGTCTGACCCCG...AGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CCA 90 bp TTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCTTGGTTAGAAGAGCAGGTCCTTaGAGGGCACACGGGCATAGG +
Preference number: 4 (lower is better)
Translates to: FCSFILFKALGTDPWSLVRRAGP*RAHGHR
Trigger: CCTATGCCCGTGTGCCCTCCAAGGACCTGCTCTTCT...AACCAAGGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GATACCTTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCGCATCTGGTCCCAGGTaGGACACAGGGTCTCATTCA +
Preference number: 4 (lower is better)
Translates to: DTFCSFILFKALGTDPWSASGPR*DTGSHS
Trigger: TGAATGAGACCCTGTGTCCCACCTGGGACCAGATGC...GGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAAGGTATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp TTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCTTGGTTTCGAACACCAGCATCTaGTCCCAGGTGGGACACAGG +
Preference number: 4 (lower is better)
Translates to: FCSFILFKALGTDPWSLVSNTSI*SQVGHR
Trigger: CCTGTGTCCCACCTGGGACCAGATGCTGGTGTTCGA...AACCAAGGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp AGGCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCAAGTCAGCTTTGCCCATaGAATCCTGGTCATAGATTT +
Preference number: 4 (lower is better)
Translates to: RLPRGDGKESKPLKGNAASQLCP*NPGHRF
Trigger: AAATCTATGACCAGGATTCCATGGGCAAAGCTGACT...TGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp ACAGTCACATGCCAAAGGAGGCTCTTAGTGTCCTTTTCTCTCGGGGCAGATAGTCAGCAGCTCGTTCTCTaGGAGGTCCACTTCAAACCA +
Preference number: 4 (lower is better)
Translates to: TVTCQRRLLVSFSLGADSQQLVL*EVHFKP
Trigger: TGGTTTGAAGTGGACCTCCCAGAGAACGAGCTGCTG...ACTATCTGCCCCGAGAGAAAAGGACACTAAGAGCCTCCTTTGGCATGTGACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426958.1
CDS-3UTR CCA 90 bp AATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGATGCGCTCCTCCTCGGTaGAGCCATCCTCATCATCCC +
Preference number: 4 (lower is better)
Translates to: NFTKASILYLEDLGRVSGCAPPR*SHPHHP
Trigger: GGGATGATGAGGATGGCTCCACCGAGGAGGAGCGCA...TCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp TTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCTTGGTTCCGGGACACGTCCTCTaGGAGTGGCACTTTGTACAC +
Preference number: 4 (lower is better)
Translates to: FCSFILFKALGTDPWSLVPGHVL*EWHFVH
Trigger: GTGTACAAAGTGCCACTCCCAGAGGACGTGTCCCGG...AACCAAGGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GACCCATGGTCCTTGGTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCAGGGTGCAGGTCCGTaGCCCGGACCACATAGACTC +
Preference number: 4 (lower is better)
Translates to: DPWSLVNFTKASILYLEDQGAGP*PGPHRL
Trigger: GAGTCTATGTGGTCCGGGCCACGGACCTGCACCCTG...GTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAACCAAGGACCATGGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GACCCATGGTCCTTGGTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACAGGCGGGTCAGGATCTaGCTGGGCTTCATGGGGTCC +
Preference number: 4 (lower is better)
Translates to: DPWSLVNFTKASILYLEDRRVRI*LGFMGS
Trigger: GGACCCCATGAAGCCCAGCCAGATCCTGACCCGCCT...GTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAACCAAGGACCATGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp TCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTCCACATGCTCGTCTGTaGGCTTCCTCTGACCGTTCT +
Preference number: 4 (lower is better)
Translates to: SLKLQSCTWKTWGGFQESPHARL*ASSDRS
Trigger: AGAACGGTCAGAGGAAGCCCACAGACGAGCATGTGG...AGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp AATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAAGGCGTCCCAGGGGCTaGCATGTCCATGGGGAACAT +
Preference number: 4 (lower is better)
Translates to: NFTKASILYLEDLGRVSGRRPRG*HVHGEH
Trigger: ATGTTCCCCATGGACATGCCAGCCCCTGGGACGCCT...TCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GACCCATGGTCCTTGGTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACTGCTTGTCCTCCTGCTaGCCCTTCAGCCACCCCCTC +
Preference number: 4 (lower is better)
Translates to: DPWSLVNFTKASILYLEDCLSSC*PFSHPL
Trigger: GAGGGGGTGGCTGAAGGGCCAGCAGGAGGACAAGCA...GTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAACCAAGGACCATGGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp TTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCTTGGTTTCGTCAGCGGAGAAGTaGTCCGCATCCCAGATCTGC +
Preference number: 4 (lower is better)
Translates to: FCSFILFKALGTDPWSLVSSAEK*SASQIC
Trigger: GCAGATCTGGGATGCGGACCACTTCTCCGCTGACGA...AACCAAGGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCACCATGGTGCACTGCTTaGCTGTCTTTGCGCCCCGCG +
Preference number: 4 (lower is better)
Translates to: VNFTKASILYLEDLGRVSPWCTA*LSLRPA
Trigger: CGCGGGGCGCAAAGACAGCCAAGCAGTGCACCATGG...TGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GACCCATGGTCCTTGGTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACGGCGCCTCAGCCAGGTaGGGCAAGAGAGACCCATTC +
Preference number: 4 (lower is better)
Translates to: DPWSLVNFTKASILYLEDGASAR*GKRDPF
Trigger: GAATGGGTCTCTCTTGCCCCACCTGGCTGAGGCGCC...GTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAACCAAGGACCATGGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GATACCTTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCTCAGGAGTCTTCCTCTaGAGCCTGGGCCTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: DTFCSFILFKALGTDPWSSGVFL*SLGLKK
Trigger: CTTCTTCAGGCCCAGGCTCCAGAGGAAGACTCCTGA...GGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAAGGTATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp AATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTCTGGGCACTGACCCATaGTCCTTGGTTAATTTCACT +
Preference number: 4 (lower is better)
Translates to: NPVLGRPGEGFRSLPLEPLGTDP*SLVNFT
Trigger: AGTGAAATTAACCAAGGACCATGGGTCAGTGCCCAG...AGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCACAGAAGCAGCCGCGCTaGGACTTGTGGGCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: VNFTKASILYLEDLGRVSQKQPR*DLWAGS
Trigger: AGACCCTGCCCACAAGTCCCAGCGCGGCTGCTTCTG...TGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp GTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCACCTTGCGCTGTTTGCTaGGGCCCAGCCACAGGTACA +
Preference number: 4 (lower is better)
Translates to: VNFTKASILYLEDLGRVSPCAVC*GPATGT
Trigger: TGTACCTGTGGCTGGGCCTCAGCAAACAGCGCAAGG...TGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp GATACCTTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCCAGCCACATCCACCTTaGCAACAGCTTCAGAAGTCG +
Preference number: 4 (lower is better)
Translates to: DTFCSFILFKALGTDPWSQPHPP*QQLQKS
Trigger: CGACTTCTGAAGCTGTTGTCAAGGTGGATGTGGCTG...GGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAAGGTATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp GTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCACTCCTTGCCCTTCATTaGCCCCTTCAGGCCCTCGGT +
Preference number: 4 (lower is better)
Translates to: VNFTKASILYLEDLGRVSLLALH*PLQALG
Trigger: ACCGAGGGCCTGAAGGGGTCAATGAAGGGCAAGGAG...TGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp GATACCTTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCTCTTGGTTTCCCCAATaGGGTCATCAGTGCCCACCA +
Preference number: 4 (lower is better)
Translates to: DTFCSFILFKALGTDPWSSWFPQ*GHQCPP
Trigger: TGGTGGGCACTGATGACCTCATTGGGGAAACCAAGA...GGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAAGGTATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp GACCCATGGTCCTTGGTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACAGTTGCCCTCGCCAGTaGGGGAGTGGTAGTGGACGT +
Preference number: 4 (lower is better)
Translates to: DPWSLVNFTKASILYLEDSCPRQ*GSGSGR
Trigger: ACGTCCACTACCACTCCCTCACTGGCGAGGGCAACT...GTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAACCAAGGACCATGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp AATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGGAGCAGCAACAGTTTaGGGAGCAGCCAGCGATACG +
Preference number: 4 (lower is better)
Translates to: NFTKASILYLEDLGRVSGGAATV*GAASDT
Trigger: CGTATCGCTGGCTGCTCCTCAAACTGTTGCTGCTCC...TCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
CDS-3UTR TCA 90 bp AATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGACCCCAAGGAGCTTTTTaGCCATGTAGCCAGGGAGGC +
Preference number: 4 (lower is better)
Translates to: NFTKASILYLEDLGRVSGPQGAF*PCSQGG
Trigger: GCCTCCCTGGCTACATGGTCAAAAAGCTCCTTGGGG...TCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp GATACCTTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCGGGTTCTTCAGTTCCTaGAGGAAGAAGCCACCTCTG +
Preference number: 4 (lower is better)
Translates to: DTFCSFILFKALGTDPWSGFFSS*RKKPPL
Trigger: CAGAGGTGGCTTCTTCCTTCAGGAACTGAAGAACCC...GGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAAGGTATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
CDS-3UTR GCA 90 bp AATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAAGCATCCTGGCCTGCTaGCCCATGTTTTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: NFTKASILYLEDLGRVSGSILAC*PMFSSS
Trigger: GGAGCTGGAAAACATGGGGCAGCAGGCCAGGATGCT...TCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp TTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCTTGGTTCTCCAGCTGTGGCGTTaGCACGGTAGATCTGGTAGT +
Preference number: 4 (lower is better)
Translates to: FCSFILFKALGTDPWSLVLQLWR*HGRSGS
Trigger: ACTACCAGATCTACCGTGGCAACGCCACAGCTGGAG...AACCAAGGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp AATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGGTCATTGCTCGGGATaGCCTGGAACATGCCGTAGG +
Preference number: 4 (lower is better)
Translates to: NFTKASILYLEDLGRVSGGHCSG*PGTCRR
Trigger: CCTACGGCATGTTCCAGGGCATCCCGAGCAATGACC...TCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp TTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCTTGGTTATCTCCATGGTGCACTaGTTGGCTGTCTTTGCGCCC +
Preference number: 4 (lower is better)
Translates to: FCSFILFKALGTDPWSLVISMVH*LAVFAP
Trigger: GGGCGCAAAGACAGCCAAGCAGTGCACCATGGAGAT...AACCAAGGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAACTCATCGTTCTCATTaGGGGCCAGGAGGGGCCACC +
Preference number: 4 (lower is better)
Translates to: VNFTKASILYLEDLGRVSTHRSH*GPGGAT
Trigger: GGTGGCCCCTCCTGGCCCGCAATGAGAACGATGAGT...TGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GACCCATGGTCCTTGGTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTCGGAAAGTCACTTTaGCGATCCGGTCGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: DPWSLVNFTKASILYLEDLGKSL*RSGRPC
Trigger: GCAGGGGCGACCGGATCGCCAAAGTGACTTTCCGAG...GTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAACCAAGGACCATGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CCA 90 bp GACCCATGGTCCTTGGTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCCACTGTGCCGTCAGTaGCCTGATACCGGACCTCCA +
Preference number: 4 (lower is better)
Translates to: DPWSLVNFTKASILYLEDPLCRQ*PDTGPP
Trigger: TGGAGGTCCGGTATCAGGCCACTGACGGCACAGTGG...GTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAACCAAGGACCATGGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CCA 90 bp AATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGGGCCGCCCAGCACTTaGCTCCATCTTAATGTCTGG +
Preference number: 4 (lower is better)
Translates to: NFTKASILYLEDLGRVSGGPPST*LHLNVW
Trigger: CCAGACATTAAGATGGAGCCAAGTGCTGGGCGGCCC...TCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CCA 90 bp TTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCTTGGTTATGGAACTGGTGCTCTaGCTGCGAGTACACGGTTCC +
Preference number: 4 (lower is better)
Translates to: FCSFILFKALGTDPWSLVMELVL*LRVHGS
Trigger: GGAACCGTGTACTCGCAGCCAGAGCACCAGTTCCAT...AACCAAGGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CCA 90 bp GTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGCCGCATTGGTGGAGTaGAGGAGACTGAGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: VNFTKASILYLEDLGRVSAALVE*RRLRPG
Trigger: ACCTGGCCTCAGTCTCCTCCACTCCACCAATGCGGC...TGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CCA 90 bp TCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTTCTGCAGGAAGTTCTaGCACAGCCTCAGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: SLKLQSCTWKTWGGFQESFCRKF*HSLSLS
Trigger: GGACAAGCTGAGGCTGTGCCAGAACTTCCTGCAGAA...AGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp AATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGATCGAACACCAGCATCTaGTCCCAGGTGGGACACAGG +
Preference number: 4 (lower is better)
Translates to: NFTKASILYLEDLGRVSGSNTSI*SQVGHR
Trigger: CCTGTGTCCCACCTGGGACCAGATGCTGGTGTTCGA...TCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp ATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTGAGTCAGCTTTGCCCATaGAATCCTGGTCATAGATTT +
Preference number: 4 (lower is better)
Translates to: ILYLEDLGRVSGVFLWSLSQLCP*NPGHRF
Trigger: AAATCTATGACCAGGATTCCATGGGCAAAGCTGACT...CAGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp TCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTCAGCAGCTCGTTCTCTaGGAGGTCCACTTCAAACCA +
Preference number: 4 (lower is better)
Translates to: SLKLQSCTWKTWGGFQESQQLVL*EVHFKP
Trigger: TGGTTTGAAGTGGACCTCCCAGAGAACGAGCTGCTG...AGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCACAGCATGCTCTCGTCTaGCTCCTCCTCCTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: VNFTKASILYLEDLGRVSQHALV*LLLLWL
Trigger: GAGCCAGAGGAGGAGGAGCCAGACGAGAGCATGCTG...TGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCATGCGCTCCTCCTCGGTaGAGCCATCCTCATCATCCC +
Preference number: 4 (lower is better)
Translates to: VNFTKASILYLEDLGRVSCAPPR*SHPHHP
Trigger: GGGATGATGAGGATGGCTCCACCGAGGAGGAGCGCA...TGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAACATGCCGTAGGTaGAGTCGTAGCCGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: VNFTKASILYLEDLGRVSGTCRR*SRSRLP
Trigger: GGGAAGCCGGCTACGACTCCACCTACGGCATGTTCC...TGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GATACCTTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCGCAGCTCGTACTTCTTaGGCTTCCGAGGTGAGATGT +
Preference number: 4 (lower is better)
Translates to: DTFCSFILFKALGTDPWSAARTS*ASEVRC
Trigger: ACATCTCACCTCGGAAGCCCAAGAAGTACGAGCTGC...GGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAAGGTATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GACCCATGGTCCTTGGTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACTCAGGTCCAGCTCGATaGCCCCCAGGAAGTCGTCAG +
Preference number: 4 (lower is better)
Translates to: DPWSLVNFTKASILYLEDSGPAR*PPGSRQ
Trigger: CTGACGACTTCCTGGGGGCCATCGAGCTGGACCTGA...GTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAACCAAGGACCATGGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp CAACATGAGCAGCCCCAACAGCGCCAGCACGATCTTGATGATGAGCCACTTGTATCTGTTCTCAGAACCTaGAGATGTTGGTGTTCATGG +
Preference number: 4 (lower is better)
Translates to: QHEQPQQRQHDLDDEPLVSVLRT*RCWCSW
Trigger: CCATGAACACCAACATCTCCAGGTTCTGAGAACAGA...TACAAGTGGCTCATCATCAAGATCGTGCTGGCGCTGTTGGGGCTGCTCATGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338581.10
ENST00000402415.8
CDS-3UTR TCA 90 bp GTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGCTGCTCTTCTGCACTaGAGTCTTGCCCTTCTGGCC +
Preference number: 4 (lower is better)
Translates to: VNFTKASILYLEDLGRVSAALLH*SLALLA
Trigger: GGCCAGAAGGGCAAGACTTCAGTGCAGAAGAGCAGC...TGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR TCA 90 bp TTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCTTGGTTCGGCAATGTGGTCCATaGTGTTGGCATTGTAGAGGC +
Preference number: 4 (lower is better)
Translates to: FCSFILFKALGTDPWSLVRQCGP*CWHCRG
Trigger: GCCTCTACAATGCCAACATCATGGACCACATTGCCG...AACCAAGGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR TCA 90 bp TCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTCCAGAGCCAGAGCTCTaGGTTTTCTTCTTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: SLKLQSCTWKTWGGFQESPEPEL*VFFFFS
Trigger: GGAGAAGAAGAAGAAAACTCAGAGCTCTGGCTCTGG...AGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp AATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAACTCCTTCTTGGAGATaGCGATCTTCTCCTCCGCCG +
Preference number: 4 (lower is better)
Translates to: NFTKASILYLEDLGRVSGTPSWR*RSSPPP
Trigger: CGGCGGAGGAGAAGATCGTCATCTCCAAGAAGGAGT...TCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp AATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGACCTCCACCTTGCCCGTaGGCTCAAACTCATCGTTCT +
Preference number: 4 (lower is better)
Translates to: NFTKASILYLEDLGRVSGPPPCP*AQTHRS
Trigger: AGAACGATGAGTTTGAGCTCACGGGCAAGGTGGAGG...TCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp TTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCTTGGTTGGGTTCTTCAGTTCCTaGAGGAAGAAGCCACCTCTG +
Preference number: 4 (lower is better)
Translates to: FCSFILFKALGTDPWSLVGFFSS*RKKPPL
Trigger: CAGAGGTGGCTTCTTCCTTCAGGAACTGAAGAACCC...AACCAAGGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
CDS-3UTR GCA 90 bp TCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCTGTAAAGACGACCTaGTCATTCCACAGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: SLKLQSCTWKTWGGFQESSVKTT*SFHRGS
Trigger: TGAGCCCCTGTGGAATGAGCAGGTCGTCTTTACAGA...AGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR GCA 90 bp AATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAAGGAAGCGCAGCTTCTaGAGGAAGTTCTGGCACAGC +
Preference number: 4 (lower is better)
Translates to: NFTKASILYLEDLGRVSGRKRSF*RKFWHS
Trigger: GCTGTGCCAGAACTTCCTGCAGAAGCTGCGCTTCCT...TCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp AATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGCAGTACGCCTCGTCTaGCATCTTCACCAGGGGTTT +
Preference number: 4 (lower is better)
Translates to: NFTKASILYLEDLGRVSGAVRLV*HLHQGF
Trigger: AAACCCCTGGTGAAGATGGCAGACGAGGCGTACTGC...TCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp AATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGACTCCAGCTGTGGCGTTaGCACGGTAGATCTGGTAGT +
Preference number: 4 (lower is better)
Translates to: NFTKASILYLEDLGRVSGLQLWR*HGRSGS
Trigger: ACTACCAGATCTACCGTGGCAACGCCACAGCTGGAG...TCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GACCCATGGTCCTTGGTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCAGGTCAGCCTTCCCTaGTGGTCCAATCTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: DPWSLVNFTKASILYLEDQVSLP*WSNLQQ
Trigger: CTGCTGCAGATTGGACCAGCAGGGAAGGCTGACCTG...GTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAACCAAGGACCATGGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GACCCATGGTCCTTGGTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACACCACCAGTCCAGCATaGTCTCGTCTGGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: DPWSLVNFTKASILYLEDTTSPA*SRLAPP
Trigger: AGGAGGAGCCAGACGAGAGCATGCTGGACTGGTGGT...GTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAACCAAGGACCATGGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GACCCATGGTCCTTGGTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACGGATGCCCTGGAACATaGCGTAGGTGGAGTCGTAGC +
Preference number: 4 (lower is better)
Translates to: DPWSLVNFTKASILYLEDGCPGT*RRWSRS
Trigger: GCTACGACTCCACCTACGGCATGTTCCAGGGCATCC...GTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAACCAAGGACCATGGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GACCCATGGTCCTTGGTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACGGTCATTGCTCGGGATaGCCTGGAACATGCCGTAGG +
Preference number: 4 (lower is better)
Translates to: DPWSLVNFTKASILYLEDGHCSG*PGTCRR
Trigger: CCTACGGCATGTTCCAGGGCATCCCGAGCAATGACC...GTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAACCAAGGACCATGGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR GCA 90 bp GACCCATGGTCCTTGGTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACATGGGGAGTCCCCTCTaGTGCTTCTCACAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: DPWSLVNFTKASILYLEDMGSPL*CFSQLL
Trigger: GAGGAGCTGTGAGAAGCAGCAGAGGGGACTCCCCAT...GTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAACCAAGGACCATGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GATACCTTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCCATGCGTTTGCAGAGTaGGGGGAAGAGGTCTGTAAA +
Preference number: 4 (lower is better)
Translates to: DTFCSFILFKALGTDPWSHAFAE*GEEVCK
Trigger: TTTACAGACCTCTTCCCCCCACTCTGCAAACGCATG...GGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAAGGTATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CCA 90 bp TTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCTTGGTTTTCTGCAGGAAGTTCTaGCACAGCCTCAGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: FCSFILFKALGTDPWSLVFCRKF*HSLSLS
Trigger: GGACAAGCTGAGGCTGTGCCAGAACTTCCTGCAGAA...AACCAAGGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGAAGCCCCGCTTCCCTaGCAGCTTAAGGAAGAGCGT +
Preference number: 4 (lower is better)
Translates to: VNFTKASILYLEDLGRVSEAPLP*QLKEER
Trigger: ACGCTCTTCCTTAAGCTGCCAGGGAAGCGGGGCTTC...TGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCACAGCCACCGTCAGCATaGATTCCATGGGGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: VNFTKASILYLEDLGRVSQPPSA*IPWGRR
Trigger: CCTCCTTCCCCATGGAATCCATGCTGACGGTGGCTG...TGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCATCGTCAGCGGAGAAGTaGTCCGCATCCCAGATCTGC +
Preference number: 4 (lower is better)
Translates to: VNFTKASILYLEDLGRVSSSAEK*SASQIC
Trigger: GCAGATCTGGGATGCGGACCACTTCTCCGCTGACGA...TGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp TCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTGTACTTGGAAGACCTaGGGAGGGTTTCAGGAGTCT +
Preference number: 4 (lower is better)
Translates to: SLKLQSCTWKTWGGFQESCTWKT*GGFQES
Trigger: AGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACA...AGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGTGAGAGGAGCCAAGTaGAGCCCAGCAGTGGCAGAA +
Preference number: 4 (lower is better)
Translates to: VNFTKASILYLEDLGRVSVRGAK*SPAVAE
Trigger: TTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCAC...TGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GACCCATGGTCCTTGGTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACGTGAGAGGAGCCAAGTaGAGCCCAGCAGTGGCAGAA +
Preference number: 4 (lower is better)
Translates to: DPWSLVNFTKASILYLEDVRGAK*SPAVAE
Trigger: TTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCAC...GTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAACCAAGGACCATGGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAAGGGACCTCATGATCTaGGAGCTCTCGCTAGGGCCA +
Preference number: 4 (lower is better)
Translates to: VNFTKASILYLEDLGRVSRDLMI*ELSLGP
Trigger: TGGCCCTAGCGAGAGCTCCCAGATCATGAGGTCCCT...TGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402415.8
CDS-3UTR TCA 90 bp GACCCATGGTCCTTGGTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACACTCCTTCTTGGAGATaGCGATCTTCTCCTCCGCCG +
Preference number: 4 (lower is better)
Translates to: DPWSLVNFTKASILYLEDTPSWR*RSSPPP
Trigger: CGGCGGAGGAGAAGATCGTCATCTCCAAGAAGGAGT...GTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAACCAAGGACCATGGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp GTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAAAGAGTCCAAGCCACTaGAAGGAAATGCGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: VNFTKASILYLEDLGRVSKSPSH*KEMRQG
Trigger: GCCCTGCCGCATTTCCTTTCAGTGGCTTGGACTCTT...TGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp AATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGGGTTCTTCAGTTCCTaGAGGAAGAAGCCACCTCTG +
Preference number: 4 (lower is better)
Translates to: NFTKASILYLEDLGRVSGGFFSS*RKKPPL
Trigger: CAGAGGTGGCTTCTTCCTTCAGGAACTGAAGAACCC...TCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
CDS-3UTR GCA 90 bp TCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTTCTTCCATTTTACCTaGACAGCTCTCCGAGATGGG +
Preference number: 4 (lower is better)
Translates to: SLKLQSCTWKTWGGFQESFFHFT*TALRDG
Trigger: CCCATCTCGGAGAGCTGTGCAGGTAAAATGGAAGAA...AGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CCA 90 bp AATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGCGTGTAGTTACGTGTaGAGCCGTACATGTTCACCC +
Preference number: 4 (lower is better)
Translates to: NFTKASILYLEDLGRVSGACSYV*SRTCSP
Trigger: GGGTGAACATGTACGGCTCCACACGTAACTACACGC...TCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CCA 90 bp AATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGACAGCAGCTCGTTCTCTaGGAGGTCCACTTCAAACCA +
Preference number: 4 (lower is better)
Translates to: NFTKASILYLEDLGRVSGQQLVL*EVHFKP
Trigger: TGGTTTGAAGTGGACCTCCCAGAGAACGAGCTGCTG...TCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp TTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCTTGGTTTCTTCTTCTCCTCTTTaGCAGCCCTTGCCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: FCSFILFKALGTDPWSLVSSSPL*QPLPSP
Trigger: AGGAGAAGGCAAGGGCTGCCAAAGAGGAGAAGAAGA...AACCAAGGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GACCCATGGTCCTTGGTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCACGTCCTCTGGGAGTaGCACTTTGTACACGCAGAG +
Preference number: 4 (lower is better)
Translates to: DPWSLVNFTKASILYLEDHVLWE*HFVHAE
Trigger: CTCTGCGTGTACAAAGTGCCACTCCCAGAGGACGTG...GTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAACCAAGGACCATGGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp AATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGATCAGCATGGATTCCATaGGGAAGGAGGCCTCGATGT +
Preference number: 4 (lower is better)
Translates to: NFTKASILYLEDLGRVSGSAWIP*GRRPRC
Trigger: ACATCGAGGCCTCCTTCCCCATGGAATCCATGCTGA...TCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp TTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCTTGGTTTGTACTTGGAAGACCTaGGGAGGGTTTCAGGAGTCT +
Preference number: 4 (lower is better)
Translates to: FCSFILFKALGTDPWSLVCTWKT*GGFQES
Trigger: AGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACA...AACCAAGGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp CAACATGAGCAGCCCCAACAGCGCCAGCACGATCTTGATGATGAGCCACTTGTACTGACCCATGGTCCTTaGTTAATTTCACTAAAGCTT +
Preference number: 4 (lower is better)
Translates to: QHEQPQQRQHDLDDEPLVLTHGP*LISLKL
Trigger: AAGCTTTAGTGAAATTAACCAAGGACCATGGGTCAG...TACAAGTGGCTCATCATCAAGATCGTGCTGGCGCTGTTGGGGCTGCTCATGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
CDS-3UTR CCA 90 bp TCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTTCTTTTTAAAGCCCTaGGCACTGACCCATGGTCCT +
Preference number: 4 (lower is better)
Translates to: SLKLQSCTWKTWGGFQESFFLKP*ALTHGP
Trigger: AGGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAA...AGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp GATACCTTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCAGCAGGTTCTTGGAGTaGATCACCGAAATCTTGATG +
Preference number: 4 (lower is better)
Translates to: DTFCSFILFKALGTDPWSSRFLE*ITEILM
Trigger: CATCAAGATTTCGGTGATTCACTCCAAGAACCTGCT...GGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAAGGTATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR TCA 90 bp TTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCTTGGTTTGCTCATCATCCAGATaGAGATGTCGGGAATGCTGT +
Preference number: 4 (lower is better)
Translates to: FCSFILFKALGTDPWSLVCSSSR*RCRECC
Trigger: ACAGCATTCCCGACATCTTCATCTGGATGATGAGCA...AACCAAGGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp GTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCACAGCCACATCCACCTTaGCAACAGCTTCAGAAGTCG +
Preference number: 4 (lower is better)
Translates to: VNFTKASILYLEDLGRVSQPHPP*QQLQKS
Trigger: CGACTTCTGAAGCTGTTGTCAAGGTGGATGTGGCTG...TGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp TCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTGAGTATCGGTCATCATaGGGAAGTCATCAATTTCCC +
Preference number: 4 (lower is better)
Translates to: SLKLQSCTWKTWGGFQESEYRSS*GSHQFP
Trigger: GGGAAATTGATGACTTCCTCATGATGACCGATACTC...AGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
CDS-3UTR GCA 90 bp AATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGATCTGCACTGAAGTCTTaGCCTTCTGGCCAGCAAAGA +
Preference number: 4 (lower is better)
Translates to: NFTKASILYLEDLGRVSGSALKS*PSGQQR
Trigger: TCTTTGCTGGCCAGAAGGGCAAGACTTCAGTGCAGA...TCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CCA 90 bp GTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCATTCTGCAGGAAGTTCTaGCACAGCCTCAGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: VNFTKASILYLEDLGRVSFCRKF*HSLSLS
Trigger: GGACAAGCTGAGGCTGTGCCAGAACTTCCTGCAGAA...TGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCACAGCAGCTCGTTCTCTaGGAGGTCCACTTCAAACCA +
Preference number: 4 (lower is better)
Translates to: VNFTKASILYLEDLGRVSQQLVL*EVHFKP
Trigger: TGGTTTGAAGTGGACCTCCCAGAGAACGAGCTGCTG...TGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp TTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCTTGGTTCCTTCATGGTGTCAATaGAGGCAAAGTACTTGGACC +
Preference number: 4 (lower is better)
Translates to: FCSFILFKALGTDPWSLVPSWCQ*RQSTWT
Trigger: GGTCCAAGTACTTTGCCTCCATTGACACCATGAAGG...AACCAAGGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GACCCATGGTCCTTGGTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACTCAGCATGGATTCCATaGGGAAGGAGGCCTCGATGT +
Preference number: 4 (lower is better)
Translates to: DPWSLVNFTKASILYLEDSAWIP*GRRPRC
Trigger: ACATCGAGGCCTCCTTCCCCATGGAATCCATGCTGA...GTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAACCAAGGACCATGGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GACCCATGGTCCTTGGTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACGCAGCTCGTACTTCTTaGGCTTCCGAGGTGAGATGT +
Preference number: 4 (lower is better)
Translates to: DPWSLVNFTKASILYLEDAARTS*ASEVRC
Trigger: ACATCTCACCTCGGAAGCCCAAGAAGTACGAGCTGC...GTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAACCAAGGACCATGGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp TTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCTTGGTTTTCTTTTTAAAGCCCTaGGCACTGACCCATGGTCCT +
Preference number: 4 (lower is better)
Translates to: FCSFILFKALGTDPWSLVFFLKP*ALTHGP
Trigger: AGGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAA...AACCAAGGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp AATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGATCTTTACATTGGCCATaGGGCTTGTGTTCATACGGG +
Preference number: 4 (lower is better)
Translates to: NFTKASILYLEDLGRVSGSLHWP*GLCSYG
Trigger: CCCGTATGAACACAAGCCTCATGGCCAATGTAAAGA...TCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR GCA 90 bp GTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCACCTTTGACGCGCTTTTaGTTGAAGATGGACACGAGG +
Preference number: 4 (lower is better)
Translates to: VNFTKASILYLEDLGRVSPLTRF*LKMDTR
Trigger: CCTCGTGTCCATCTTCAAGCAAAAGCGCGTCAAAGG...TGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCATATTGTAGCCATGTGTaGAGTAGGTCTGGGCGATGC +
Preference number: 4 (lower is better)
Translates to: VNFTKASILYLEDLGRVSYCSHV*SRSGRC
Trigger: GCATCGCCCAGACCTACTCCACACATGGCTACAATA...TGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
3UTR CAA 72 bp TCCTTGGTTAATTTCACTAAAGCTTCAATCCTGTACTaGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: SLVNFTKASILY*EDLGRVSGVFL
Trigger: GAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAACCAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp GTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCATGCTCATCATCCAGATaGAGATGTCGGGAATGCTGT +
Preference number: 4 (lower is better)
Translates to: VNFTKASILYLEDLGRVSCSSSR*RCRECC
Trigger: ACAGCATTCCCGACATCTTCATCTGGATGATGAGCA...TGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAAGCTTGTCGGCAATGTaGTCCATGATGTTGGCATTG +
Preference number: 4 (lower is better)
Translates to: VNFTKASILYLEDLGRVSSLSAM*SMMLAL
Trigger: CAATGCCAACATCATGGACCACATTGCCGACAAGCT...TGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CCA 90 bp GTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCACCTTCATGGTGTCAATaGAGGCAAAGTACTTGGACC +
Preference number: 4 (lower is better)
Translates to: VNFTKASILYLEDLGRVSPSWCQ*RQSTWT
Trigger: GGTCCAAGTACTTTGCCTCCATTGACACCATGAAGG...TGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp AATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGAAGTTGCTCCTTCATaGTGTCAATGGAGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: NFTKASILYLEDLGRVSGEVAPS*CQWRQS
Trigger: ACTTTGCCTCCATTGACACCATGAAGGAGCAACTTC...TCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCACTTCAATCCTGTACTTaGAAGACCTGGGGAGGGTTT +
Preference number: 4 (lower is better)
Translates to: VNFTKASILYLEDLGRVSLQSCT*KTWGGF
Trigger: AAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAG...TGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GACCCATGGTCCTTGGTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGCACTGACCCATaGTCCTTGGTTAATTTCACT +
Preference number: 4 (lower is better)
Translates to: DPWSLVNFTKASILYLEDLGTDP*SLVNFT
Trigger: AGTGAAATTAACCAAGGACCATGGGTCAGTGCCCAG...GTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAACCAAGGACCATGGGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR TCA 90 bp GTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAAGGACTTCTCCGTTTTaGTCATCTCCTGTATGTCGT +
Preference number: 4 (lower is better)
Translates to: VNFTKASILYLEDLGRVSRTSPF*SSPVCR
Trigger: ACGACATACAGGAGATGATCAAAACGGAGAAGTCCT...TGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp AATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAAGTCAGCTTTGCCCATaGAATCCTGGTCATAGATTT +
Preference number: 4 (lower is better)
Translates to: NFTKASILYLEDLGRVSGSQLCP*NPGHRF
Trigger: AAATCTATGACCAGGATTCCATGGGCAAAGCTGACT...TCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
3UTR CAA 72 bp ATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCTaGGTTAATTTCACTAAAGCTTCAATCCTGTACTTG +
Preference number: 4 (lower is better)
Translates to: ILFKALGTDPWS*VNFTKASILYL
Trigger: CAAGTACAGGATTGAAGCTTTAGTGAAATTAACCAAGGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CCA 90 bp GACCCATGGTCCTTGGTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGACCCATGGTCCTTaGTTAATTTCACTAAAGCTT +
Preference number: 4 (lower is better)
Translates to: DPWSLVNFTKASILYLEDLTHGP*LISLKL
Trigger: AAGCTTTAGTGAAATTAACCAAGGACCATGGGTCAG...GTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAACCAAGGACCATGGGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS GCA 90 bp GAGCAGCGGCCTCGTCTCCACATGCTCTGGCACCAGGCGGCAGCCTaGGCGGGGGATGTCCTCCCAGTGCCTCAGGGCCAACAGCGCCAC +
Preference number: 5 (lower is better)
Translates to: EQRPRLHMLWHQAAA*AGDVLPVPQGQQRH
Trigger: GTGGCGCTGTTGGCCCTGAGGCACTGGGAGGACATCCCCCGCGCAGGCTGCCGCCTGGTGCCAGAGCATGTGGAGACGAGGCCGCTGCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
ENST00000464574.1
CDS CCA 90 bp GCCCGGCTTGTCGGGGTTGAGCAGCGGCCTCGTCTCCACATGCTCTaGCACCAGGCGGCAGCCTGCGCGGGGGATGTCCTCCCAGTGCCT +
Preference number: 5 (lower is better)
Translates to: ARLVGVEQRPRLHML*HQAAACAGDVLPVP
Trigger: AGGCACTGGGAGGACATCCCCCGCGCAGGCTGCCGCCTGGTGCCAGAGCATGTGGAGACGAGGCCGCTGCTCAACCCCGACAAGCCGGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
ENST00000464574.1
CDS GCA 90 bp TCGATGCCCGGCTTGTCGGGGTTGAGCAGCGGCCTCGTCTCCACATaGTCTGGCACCAGGCGGCAGCCTGCGCGGGGGATGTCCTCCCAG +
Preference number: 5 (lower is better)
Translates to: SMPGLSGLSSGLVST*SGTRRQPARGMSSQ
Trigger: CTGGGAGGACATCCCCCGCGCAGGCTGCCGCCTGGTGCCAGAGCATGTGGAGACGAGGCCGCTGCTCAACCCCGACAAGCCGGGCATCGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
ENST00000464574.1
CDS-3UTR CAA 90 bp CCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCCCCGGCTTGTCGGGGTaGAGCAGCGGCCTCGTCTCC +
Preference number: 5 (lower is better)
Translates to: PTGRTGDPLGSERSQVEPPGLSG*SSGLVS
Trigger: GGAGACGAGGCCGCTGCTCAACCCCGACAAGCCGGG...GGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGG
70% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS GCA 90 bp TGCTCTGGCACCAGGCGGCAGCCTGCGCGGGGGATGTCCTCCCAGTaGCTCAGGGCCAACAGCGCCACATGCTCGTCTGTGGGCTTCCTC +
Preference number: 5 (lower is better)
Translates to: CSGTRRQPARGMSSQ*LRANSATCSSVGFL
Trigger: GAGGAAGCCCACAGACGAGCATGTGGCGCTGTTGGCCCTGAGGCACTGGGAGGACATCCCCCGCGCAGGCTGCCGCCTGGTGCCAGAGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
ENST00000464574.1
CDS CCA 90 bp CCGGAGAAGCCTGACCGTGGTGTTCCAGCTGGGGGCCGAGCGGTCTaGGGGCCGGTAGATGAAGCGTCGCAGGGAGCTGACGGCATGGGA +
Preference number: 5 (lower is better)
Translates to: PEKPDRGVPAGGRAV*GPVDEASQGADGMG
Trigger: TCCCATGCCGTCAGCTCCCTGCGACGCTTCATCTACCGGCCCCCAGACCGCTCGGCCCCCAGCTGGAACACCACGGTCAGGCTTCTCCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp AGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGCCCGGCTTGTCGGGGTaGAGCAGCGGCCTCGTCTCC +
Preference number: 5 (lower is better)
Translates to: RSQVEPSSGRSSRAGTCGPGLSG*SSGLVS
Trigger: GGAGACGAGGCCGCTGCTCAACCCCGACAAGCCGGG...CCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GAGGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCTGCTCGATGCCCGGCTaGTCGGGGTTGAGCAGCGGC +
Preference number: 5 (lower is better)
Translates to: EAGSAQGMKSGRWAPQAPCSMPG*SGLSSG
Trigger: GCCGCTGCTCAACCCCGACAAGCCGGGCATCGAGCA...GGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp CCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCTGCTCGATGCCCGGCTaGTCGGGGTTGAGCAGCGGC +
Preference number: 5 (lower is better)
Translates to: PTGRTGDPLGSERSQVEPCSMPG*SGLSSG
Trigger: GCCGCTGCTCAACCCCGACAAGCCGGGCATCGAGCA...GGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GAGGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCAGGGGGTCAGGTTCATaGCGGGCCAGGCCCACTGGG +
Preference number: 5 (lower is better)
Translates to: EAGSAQGMKSGRWAPQAPRGSGS*RARPTG
Trigger: CCCAGTGGGCCTGGCCCGCAATGAACCTGACCCCCT...GGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCAAGGCAGGGGCAGCACTaGACGGGCCAGCTCCCAGCT +
Preference number: 5 (lower is better)
Translates to: GRLGPRHEEWTLGSSGSPRQGQH*TGQLPA
Trigger: AGCTGGGAGCTGGCCCGTCAAGTGCTGCCCCTGCCT...TGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGCAGGCAGGGGCAGCACTaGACGGGCCAGCTCCCAGCT +
Preference number: 5 (lower is better)
Translates to: GAKWSPAVAEAAALGLVGRQGQH*TGQLPA
Trigger: AGCTGGGAGCTGGCCCGTCAAGTGCTGCCCCTGCCT...GCCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp TCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCAGGGGAGAGAGGAGGAGCCCCCATaGCACAGCACACGGCAGCGC +
Preference number: 5 (lower is better)
Translates to: SAQGMKSGRWAPQAPQGREEEPP*HSTRQR
Trigger: GCGCTGCCGTGTGCTGTGCAATGGGGGCTCCTCCTC...TCTCCCCTGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GGGCAGCACTTGACGGGCCAGCTCCCAGCTGCAGCTGAAAGGGCTGGAAGGGCAGAGGAGGAGCCCCCATaGCACAGCACACGGCAGCGC +
Preference number: 5 (lower is better)
Translates to: GQHLTGQLPAAAERAGRAEEEPP*HSTRQR
Trigger: GCGCTGCCGTGTGCTGTGCAATGGGGGCTCCTCCTC...TGCCCTTCCAGCCCTTTCAGCTGCAGCTGGGAGCTGGCCCGTCAAGTGCTGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp CCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCTGGGGGCCGTCCACTTaGCCGTCTTTGCAGAGGCGG +
Preference number: 5 (lower is better)
Translates to: PTGRTGDPLGSERSQVEPWGPST*PSLQRR
Trigger: CCGCCTCTGCAAAGACGGCAAAGTGGACGGCCCCCA...GGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTCCCGGCTTGTCGGGGTaGAGCAGCGGCCTCGTCTCC +
Preference number: 5 (lower is better)
Translates to: ERSQVEPSSGRSSRAGTCPGLSG*SSGLVS
Trigger: GGAGACGAGGCCGCTGCTCAACCCCGACAAGCCGGG...ACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GGGCAGCACTTGACGGGCCAGCTCCCAGCTGCAGCTGAAAGGGCTGGAAGGGCATGCTCGATGCCCGGCTaGTCGGGGTTGAGCAGCGGC +
Preference number: 5 (lower is better)
Translates to: GQHLTGQLPAAAERAGRACSMPG*SGLSSG
Trigger: GCCGCTGCTCAACCCCGACAAGCCGGGCATCGAGCA...TGCCCTTCCAGCCCTTTCAGCTGCAGCTGGGAGCTGGCCCGTCAAGTGCTGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGCACTGCTTGGCTGTCTTaGCGCCCCGCGGGAACCGGT +
Preference number: 5 (lower is better)
Translates to: GAKWSPAVAEAAALGLVGTAWLS*RPAGTG
Trigger: ACCGGTTCCCGCGGGGCGCAAAGACAGCCAAGCAGT...GCCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp AGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGAGGCAGGGGCAGCACTaGACGGGCCAGCTCCCAGCT +
Preference number: 5 (lower is better)
Translates to: RSQVEPSSGRSSRAGTCGRQGQH*TGQLPA
Trigger: AGCTGGGAGCTGGCCCGTCAAGTGCTGCCCCTGCCT...CCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GAGGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCGCCGTGTCGGGCCGGTaGGGTTTCTCTAGGGGGTCA +
Preference number: 5 (lower is better)
Translates to: EAGSAQGMKSGRWAPQAPAVSGR*GFSRGS
Trigger: TGACCCCCTAGAGAAACCCAACCGGCCCGACACGGC...GGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339598.8
ENST00000403946.7
CDS CCA 90 bp GACTTGAGGCGCTCCCGGTCAAGCCTGGTGCGGGATGAGTGGCCCTaGTCCTTGTCAGCGAGGGAGAGGAAGCGGCAGCAGCCACAGCTC +
Preference number: 5 (lower is better)
Translates to: DLRRSRSSLVRDEWP*SLSARERKRQQPQL
Trigger: GAGCTGTGGCTGCTGCCGCTTCCTCTCCCTCGCTGACAAGGACCAGGGCCACTCATCCCGCACCAGGCTTGACCGGGAGCGCCTCAAGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS CCA 90 bp ACCCCCTTCCCTGCACACTCGATGTCCACCCGTGGCCGGTCCACCTaGGCCAGGTTCACCCGCTTTAGGTCCCGTAGGCCCCAGAACAGC +
Preference number: 5 (lower is better)
Translates to: TPFPAHSMSTRGRST*ARFTRFRSRRPQNS
Trigger: GCTGTTCTGGGGCCTACGGGACCTAAAGCGGGTGAACCTGGCCCAGGTGGACCGGCCACGGGTGGACATCGAGTGTGCAGGGAAGGGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCACCGATGGCCACGTCGTaGACCTTGTCCGAGTCTCGG +
Preference number: 5 (lower is better)
Translates to: GRLGPRHEEWTLGSSGSPPMATS*TLSESR
Trigger: CCGAGACTCGGACAAGGTCAACGACGTGGCCATCGG...TGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CAA 90 bp GGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCAGAGTGGCCCTGGTCCTaGTCAGCGAGGGAGAGGAAG +
Preference number: 5 (lower is better)
Translates to: GRLGPRHEEWTLGSSGSPEWPWS*SARERK
Trigger: CTTCCTCTCCCTCGCTGACAAGGACCAGGGCCACTC...TGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGCTCCCTCATGCAGGACTaGAGGCGCTCCCGGTCAAGC +
Preference number: 5 (lower is better)
Translates to: GAKWSPAVAEAAALGLVGSLMQD*RRSRSS
Trigger: GCTTGACCGGGAGCGCCTCAAGTCCTGCATGAGGGA...GCCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GAGGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCCGCACAGGAACTCCTaGCGCTGTTTGCTGAGGCCC +
Preference number: 5 (lower is better)
Translates to: EAGSAQGMKSGRWAPQAPPHRNS*RCLLRP
Trigger: GGGCCTCAGCAAACAGCGCAAGGAGTTCCTGTGCGG...GGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGCACGCAGAGGGAGCCCTaGAAGCGTCCCACAATGCGC +
Preference number: 5 (lower is better)
Translates to: GAKWSPAVAEAAALGLVGTQREP*KRPTMR
Trigger: GCGCATTGTGGGACGCTTCAAGGGCTCCCTCTGCGT...GCCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GAGGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCACGCAGAGGGAGCCCTaGAAGCGTCCCACAATGCGC +
Preference number: 5 (lower is better)
Translates to: EAGSAQGMKSGRWAPQAPTQREP*KRPTMR
Trigger: GCGCATTGTGGGACGCTTCAAGGGCTCCCTCTGCGT...GGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp AGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGTGGGGGCCGTCCACTTaGCCGTCTTTGCAGAGGCGG +
Preference number: 5 (lower is better)
Translates to: RSQVEPSSGRSSRAGTCGWGPST*PSLQRR
Trigger: CCGCCTCTGCAAAGACGGCAAAGTGGACGGCCCCCA...CCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GGGCAGCACTTGACGGGCCAGCTCCCAGCTGCAGCTGAAAGGGCTGGAAGGGCATGGGGGCCGTCCACTTaGCCGTCTTTGCAGAGGCGG +
Preference number: 5 (lower is better)
Translates to: GQHLTGQLPAAAERAGRAWGPST*PSLQRR
Trigger: CCGCCTCTGCAAAGACGGCAAAGTGGACGGCCCCCA...TGCCCTTCCAGCCCTTTCAGCTGCAGCTGGGAGCTGGCCCGTCAAGTGCTGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp AGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGAGCCGCGCGGGGATCTaGTACTCGGTCTCGTCCCAG +
Preference number: 5 (lower is better)
Translates to: RSQVEPSSGRSSRAGTCGSRAGI*YSVSSQ
Trigger: CTGGGACGAGACCGAGTACAAGATCCCCGCGCGGCT...CCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGCTCCATGGTGCACTGCTaGGCTGTCTTTGCGCCCCGC +
Preference number: 5 (lower is better)
Translates to: GAKWSPAVAEAAALGLVGSMVHC*AVFAPR
Trigger: GCGGGGCGCAAAGACAGCCAAGCAGTGCACCATGGA...GCCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCACTCGTGTCGGGCCGGTaGGGTTTCTCTAGGGGGTCA +
Preference number: 5 (lower is better)
Translates to: GRLGPRHEEWTLGSSGSPLVSGR*GFSRGS
Trigger: TGACCCCCTAGAGAAACCCAACCGGCCCGACACGAG...TGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
CDS TCA 90 bp CGGGCCGGCCAGGAGGCCACTGGGCTCAGGCCCCGAGGATTTTCTTaGCCAGGTAGCCAGGCACAGAGTAGAGGAACAGGGCGAGGAGGA +
Preference number: 5 (lower is better)
Translates to: RAGQEATGLRPRGFS*PGSQAQSRGTGRGG
Trigger: TCCTCCTCGCCCTGTTCCTCTACTCTGTGCCTGGCTACCTGGTCAAGAAAATCCTCGGGGCCTGAGCCCAGTGGCCTCCTGGCCGGCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
CDS CCA 90 bp ATGCAGGACTTGAGGCGCTCCCGGTCAAGCCTGGTGCGGGATGAGTaGCCCTGGTCCTTGTCAGCGAGGGAGAGGAAGCGGCAGCAGCCA +
Preference number: 5 (lower is better)
Translates to: MQDLRRSRSSLVRDE*PWSLSARERKRQQP
Trigger: TGGCTGCTGCCGCTTCCTCTCCCTCGCTGACAAGGACCAGGGCCACTCATCCCGCACCAGGCTTGACCGGGAGCGCCTCAAGTCCTGCAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp TCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCAGGGGAGATCCCTCATGCAGGACTaGAGGCGCTCCCGGTCAAGC +
Preference number: 5 (lower is better)
Translates to: SAQGMKSGRWAPQAPQGRSLMQD*RRSRSS
Trigger: GCTTGACCGGGAGCGCCTCAAGTCCTGCATGAGGGA...TCTCCCCTGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp TCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCAGGGGAGAACCTTGGCGCAGTCCTaGCCAGTCTCCTCCTCCACG +
Preference number: 5 (lower is better)
Translates to: SAQGMKSGRWAPQAPQGRTLAQS*PVSSST
Trigger: CGTGGAGGAGGAGACTGGCAAGGACTGCGCCAAGGT...TCTCCCCTGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GAGGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCATCTTCACCAGGGGTTaGGCGAAGGTCCGGCCCATG +
Preference number: 5 (lower is better)
Translates to: EAGSAQGMKSGRWAPQAPIFTRG*AKVRPM
Trigger: CATGGGCCGGACCTTCGCCAAACCCCTGGTGAAGAT...GGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCAATCTTCACCAGGGGTTaGGCGAAGGTCCGGCCCATG +
Preference number: 5 (lower is better)
Translates to: GRLGPRHEEWTLGSSGSPIFTRG*AKVRPM
Trigger: CATGGGCCGGACCTTCGCCAAACCCCTGGTGAAGAT...TGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GGGCAGCACTTGACGGGCCAGCTCCCAGCTGCAGCTGAAAGGGCTGGAAGGGCAACGCAGAGGGAGCCCTaGAAGCGTCCCACAATGCGC +
Preference number: 5 (lower is better)
Translates to: GQHLTGQLPAAAERAGRATQREP*KRPTMR
Trigger: GCGCATTGTGGGACGCTTCAAGGGCTCCCTCTGCGT...TGCCCTTCCAGCCCTTTCAGCTGCAGCTGGGAGCTGGCCCGTCAAGTGCTGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GAGGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCTCTGGGAGTGGCACTTaGTACACGCAGAGGGAGCCC +
Preference number: 5 (lower is better)
Translates to: EAGSAQGMKSGRWAPQAPSGSGT*YTQREP
Trigger: GGGCTCCCTCTGCGTGTACAAAGTGCCACTCCCAGA...GGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp CCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCTCTGGGAGTGGCACTTaGTACACGCAGAGGGAGCCC +
Preference number: 5 (lower is better)
Translates to: PTGRTGDPLGSERSQVEPSGSGT*YTQREP
Trigger: GGGCTCCCTCTGCGTGTACAAAGTGCCACTCCCAGA...GGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCATCGCGGATGTCAGTCTaGCCTAGCCGGATGGCGATG +
Preference number: 5 (lower is better)
Translates to: GRLGPRHEEWTLGSSGSPSRMSV*PSRMAM
Trigger: CATCGCCATCCGGCTAGGCAAGACTGACATCCGCGA...TGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp TGGGCAGGGTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTTGGGGGCCGTCCACTTaGCCGTCTTTGCAGAGGCGG +
Preference number: 5 (lower is better)
Translates to: WAGSGPCCGSKTGAICRGWGPST*PSLQRR
Trigger: CCGCCTCTGCAAAGACGGCAAAGTGGACGGCCCCCA...ACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGACCCTGCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp CCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCCCAGTGAAGACGCGGTaGGCCACCTTCACTCTCCCA +
Preference number: 5 (lower is better)
Translates to: PTGRTGDPLGSERSQVEPPVKTR*ATFTLP
Trigger: TGGGAGAGTGAAGGTGGCCAACCGCGTCTTCACTGG...GGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGCCCAGTGAAGACGCGGTaGGCCACCTTCACTCTCCCA +
Preference number: 5 (lower is better)
Translates to: GAKWSPAVAEAAALGLVGPVKTR*ATFTLP
Trigger: TGGGAGAGTGAAGGTGGCCAACCGCGTCTTCACTGG...GCCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp CCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCACGTCTGTGTCCTGCTaGTCCTCCTGCTGGCCCTTC +
Preference number: 5 (lower is better)
Translates to: PTGRTGDPLGSERSQVEPTSVSC*SSCWPF
Trigger: GAAGGGCCAGCAGGAGGACAAGCAGGACACAGACGT...GGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp AGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTAGCCGCGCGGGGATCTaGTACTCGGTCTCGTCCCAG +
Preference number: 5 (lower is better)
Translates to: SERSQVEPSSGRSSRAGTSRAGI*YSVSSQ
Trigger: CTGGGACGAGACCGAGTACAAGATCCCCGCGCGGCT...AGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTAGCCGCGCGGGGATCTaGTACTCGGTCTCGTCCCAG +
Preference number: 5 (lower is better)
Translates to: ERSQVEPSSGRSSRAGTCSRAGI*YSVSSQ
Trigger: CTGGGACGAGACCGAGTACAAGATCCCCGCGCGGCT...ACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp AGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTACTGCTTGGCTGTCTTaGCGCCCCGCGGGAACCGGT +
Preference number: 5 (lower is better)
Translates to: SERSQVEPSSGRSSRAGTTAWLS*RPAGTG
Trigger: ACCGGTTCCCGCGGGGCGCAAAGACAGCCAAGCAGT...AGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GGGCAGCACTTGACGGGCCAGCTCCCAGCTGCAGCTGAAAGGGCTGGAAGGGCATCCATGGTGCACTGCTaGGCTGTCTTTGCGCCCCGC +
Preference number: 5 (lower is better)
Translates to: GQHLTGQLPAAAERAGRASMVHC*AVFAPR
Trigger: GCGGGGCGCAAAGACAGCCAAGCAGTGCACCATGGA...TGCCCTTCCAGCCCTTTCAGCTGCAGCTGGGAGCTGGCCCGTCAAGTGCTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp TCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCAGGGGAGATCCATGGTGCACTGCTaGGCTGTCTTTGCGCCCCGC +
Preference number: 5 (lower is better)
Translates to: SAQGMKSGRWAPQAPQGRSMVHC*AVFAPR
Trigger: GCGGGGCGCAAAGACAGCCAAGCAGTGCACCATGGA...TCTCCCCTGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp AGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGTCCATGGTGCACTGCTaGGCTGTCTTTGCGCCCCGC +
Preference number: 5 (lower is better)
Translates to: RSQVEPSSGRSSRAGTCGSMVHC*AVFAPR
Trigger: GCGGGGCGCAAAGACAGCCAAGCAGTGCACCATGGA...CCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp AGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGCTCGTGTCGGGCCGGTaGGGTTTCTCTAGGGGGTCA +
Preference number: 5 (lower is better)
Translates to: RSQVEPSSGRSSRAGTCGLVSGR*GFSRGS
Trigger: TGACCCCCTAGAGAAACCCAACCGGCCCGACACGAG...CCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
CDS-3UTR CAA 90 bp GGGCAGCACTTGACGGGCCAGCTCCCAGCTGCAGCTGAAAGGGCTGGAAGGGCACTCGTGTCGGGCCGGTaGGGTTTCTCTAGGGGGTCA +
Preference number: 5 (lower is better)
Translates to: GQHLTGQLPAAAERAGRALVSGR*GFSRGS
Trigger: TGACCCCCTAGAGAAACCCAACCGGCCCGACACGAG...TGCCCTTCCAGCCCTTTCAGCTGCAGCTGGGAGCTGGCCCGTCAAGTGCTGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
CDS-3UTR CAA 90 bp CAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCCGTGTCGGGCCGGTaGGGTTTCTCTAGGGGGTCA +
Preference number: 5 (lower is better)
Translates to: QATPWEVRGAKWSPAVAEAVSGR*GFSRGS
Trigger: TGACCCCCTAGAGAAACCCAACCGGCCCGACACGGC...TTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000339598.8
ENST00000403946.7
CDS TCA 90 bp GTTCCTGTCGGTGACCTGGGGCCGCATTGGTGGAGTGGAGGAGACTaGGGCCAGGTCCCCGGCATCACCGGCCTCGTCATCACTTGCGTT +
Preference number: 5 (lower is better)
Translates to: VPVGDLGPHWWSGGD*GQVPGITGLVITCV
Trigger: AACGCAAGTGATGACGAGGCCGGTGATGCCGGGGACCTGGCCTCAGTCTCCTCCACTCCACCAATGCGGCCCCAGGTCACCGACAGGAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS GCA 90 bp CCACCTTCACTCTCCCAGGGGGCCCAAAGTGGGGGCCGTCCACTTTaGCGTCTTTGCAGAGGCGGGTCAGGATCTGGCTGGGCTTCATGG +
Preference number: 5 (lower is better)
Translates to: PPSLSQGAQSGGRPL*RLCRGGSGSGWASW
Trigger: CCATGAAGCCCAGCCAGATCCTGACCCGCCTCTGCAAAGACGGCAAAGTGGACGGCCCCCACTTTGGGCCCCCTGGGAGAGTGAAGGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
ENST00000464574.1
CDS GCA 90 bp ATGTCAGCAGGGTGCAGGTCCGTGGCCTGGAATGGGGAGAAGGGCTaGCTGAGCAGGCTCCCATGCCCTGCTCATCTTCAGTGCCCCTGC +
Preference number: 5 (lower is better)
Translates to: MSAGCRSVAWNGEKG*LSRLPCPAHLQCPC
Trigger: GCAGGGGCACTGAAGATGAGCAGGGCATGGGAGCCTGCTCAGGCAGCCCTTCTCCCCATTCCAGGCCACGGACCTGCACCCTGCTGACAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464574.1
CDS-3UTR CAA 90 bp GAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTCCTCGGAAAGTCACTTaGGCGATCCGGTCGCCCCTG +
Preference number: 5 (lower is better)
Translates to: ERSQVEPSSGRSSRAGTCPRKVT*AIRSPL
Trigger: CAGGGGCGACCGGATCGCCAAAGTGACTTTCCGAGG...ACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CAA 90 bp TCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCAGGGGAGAGCCTTGTGGGGCGTCTaGATGTTGTCCCCTTTGCCC +
Preference number: 5 (lower is better)
Translates to: SAQGMKSGRWAPQAPQGRALWGV*MLSPLP
Trigger: GGGCAAAGGGGACAACATCAAGACGCCCCACAAGGC...TCTCCCCTGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CAA 90 bp GAGGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCTCTTCGTCGGTCTCATaGGCCTTGTGGGGCGTCTTG +
Preference number: 5 (lower is better)
Translates to: EAGSAQGMKSGRWAPQAPSSSVS*ALWGVL
Trigger: CAAGACGCCCCACAAGGCCAATGAGACCGACGAAGA...GGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CAA 90 bp GGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGCGCCAGCAAAGAAGACTaGCACGTAGGGGTCCACGAG +
Preference number: 5 (lower is better)
Translates to: GAKWSPAVAEAAALGLVGASKED*HVGVHE
Trigger: CTCGTGGACCCCTACGTGCAAGTCTTCTTTGCTGGC...GCCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CAA 90 bp GGGCAGCACTTGACGGGCCAGCTCCCAGCTGCAGCTGAAAGGGCTGGAAGGGCAGCCACGTCGTTGACCTaGTCCGAGTCTCGGATCTGC +
Preference number: 5 (lower is better)
Translates to: GQHLTGQLPAAAERAGRAATSLT*SESRIC
Trigger: GCAGATCCGAGACTCGGACAAGGTCAACGACGTGGC...TGCCCTTCCAGCCCTTTCAGCTGCAGCTGGGAGCTGGCCCGTCAAGTGCTGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CAA 90 bp CAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAACCGATGGCCACGTCGTaGACCTTGTCCGAGTCTCGG +
Preference number: 5 (lower is better)
Translates to: QATPWEVRGAKWSPAVAEPMATS*TLSESR
Trigger: CCGAGACTCGGACAAGGTCAACGACGTGGCCATCGG...TTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CAA 90 bp GGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGCAAGAGCGTCTTGACCTaGGCGCAGTCCTTGCCAGTC +
Preference number: 5 (lower is better)
Translates to: GAKWSPAVAEAAALGLVGKSVLT*AQSLPV
Trigger: GACTGGCAAGGACTGCGCCAAGGTCAAGACGCTCTT...GCCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp TCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCAGGGGAGAAACTCCTTGCGCTGTTaGCTGAGGCCCAGCCACAGG +
Preference number: 5 (lower is better)
Translates to: SAQGMKSGRWAPQAPQGRNSLRC*LRPSHR
Trigger: CCTGTGGCTGGGCCTCAGCAAACAGCGCAAGGAGTT...TCTCCCCTGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTCACGGCGGATCTTCACCAGGGGTTaGGCGAAGGTCCGGCCCATG +
Preference number: 5 (lower is better)
Translates to: VWPLLRIKDRCYLQGSRRIFTRG*AKVRPM
Trigger: CATGGGCCGGACCTTCGCCAAACCCCTGGTGAAGAT...CCGCCGTGACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCACCTCTTTGGCAGCCCTaGCCTTCTCCTTGCCCTTCA +
Preference number: 5 (lower is better)
Translates to: GRLGPRHEEWTLGSSGSPPLWQP*PSPCPS
Trigger: TGAAGGGCAAGGAGAAGGCAAGGGCTGCCAAAGAGG...TGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTACGCAGAGGGAGCCCTaGAAGCGTCCCACAATGCGC +
Preference number: 5 (lower is better)
Translates to: ERSQVEPSSGRSSRAGTCTQREP*KRPTMR
Trigger: GCGCATTGTGGGACGCTTCAAGGGCTCCCTCTGCGT...ACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GGGCAGCACTTGACGGGCCAGCTCCCAGCTGCAGCTGAAAGGGCTGGAAGGGCATCTGGGAGTGGCACTTaGTACACGCAGAGGGAGCCC +
Preference number: 5 (lower is better)
Translates to: GQHLTGQLPAAAERAGRASGSGT*YTQREP
Trigger: GGGCTCCCTCTGCGTGTACAAAGTGCCACTCCCAGA...TGCCCTTCCAGCCCTTTCAGCTGCAGCTGGGAGCTGGCCCGTCAAGTGCTGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCAACTCGGACCAGCACATaGATGGGGTCATTGCTCGGG +
Preference number: 5 (lower is better)
Translates to: GRLGPRHEEWTLGSSGSPTRTST*MGSLLG
Trigger: CCCGAGCAATGACCCCATCAATGTGCTGGTCCGAGT...TGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GAGGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCACTCGGACCAGCACATaGATGGGGTCATTGCTCGGG +
Preference number: 5 (lower is better)
Translates to: EAGSAQGMKSGRWAPQAPTRTST*MGSLLG
Trigger: CCCGAGCAATGACCCCATCAATGTGCTGGTCCGAGT...GGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGCACTCGGACCAGCACATaGATGGGGTCATTGCTCGGG +
Preference number: 5 (lower is better)
Translates to: GAKWSPAVAEAAALGLVGTRTST*MGSLLG
Trigger: CCCGAGCAATGACCCCATCAATGTGCTGGTCCGAGT...GCCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp TCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCAGGGGAGAGGGTCAGCTTTGCCGTaGATGTCAGCAGGGTGCAGG +
Preference number: 5 (lower is better)
Translates to: SAQGMKSGRWAPQAPQGRGSALP*MSAGCR
Trigger: CCTGCACCCTGCTGACATCAACGGCAAAGCTGACCC...TCTCCCCTGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GGGCAGCACTTGACGGGCCAGCTCCCAGCTGCAGCTGAAAGGGCTGGAAGGGCAGGGTCAGCTTTGCCGTaGATGTCAGCAGGGTGCAGG +
Preference number: 5 (lower is better)
Translates to: GQHLTGQLPAAAERAGRAGSALP*MSAGCR
Trigger: CCTGCACCCTGCTGACATCAACGGCAAAGCTGACCC...TGCCCTTCCAGCCCTTTCAGCTGCAGCTGGGAGCTGGCCCGTCAAGTGCTGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GGGCAGCACTTGACGGGCCAGCTCCCAGCTGCAGCTGAAAGGGCTGGAAGGGCATCGCGGATGTCAGTCTaGCCTAGCCGGATGGCGATG +
Preference number: 5 (lower is better)
Translates to: GQHLTGQLPAAAERAGRASRMSV*PSRMAM
Trigger: CATCGCCATCCGGCTAGGCAAGACTGACATCCGCGA...TGCCCTTCCAGCCCTTTCAGCTGCAGCTGGGAGCTGGCCCGTCAAGTGCTGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GAGGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCTCCACTTTGCCGTCTTaGCAGAGGCGGGTCAGGATC +
Preference number: 5 (lower is better)
Translates to: EAGSAQGMKSGRWAPQAPSTLPS*QRRVRI
Trigger: GATCCTGACCCGCCTCTGCAAAGACGGCAAAGTGGA...GGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp AGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGACGTCTGTGTCCTGCTaGTCCTCCTGCTGGCCCTTC +
Preference number: 5 (lower is better)
Translates to: RSQVEPSSGRSSRAGTCGTSVSC*SSCWPF
Trigger: GAAGGGCCAGCAGGAGGACAAGCAGGACACAGACGT...CCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp TGGAAACCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGACTGCTTGGCTGTCTTaGCGCCCCGCGGGAACCGGT +
Preference number: 5 (lower is better)
Translates to: WKPTGRTGDPLGSERSQVTAWLS*RPAGTG
Trigger: ACCGGTTCCCGCGGGGCGCAAAGACAGCCAAGCAGT...CACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGGTTTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GAGGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCAGCTCAGCCTCCACCTaGCCCGTGAGCTCAAACTCA +
Preference number: 5 (lower is better)
Translates to: EAGSAQGMKSGRWAPQAPSSAST*PVSSNS
Trigger: TGAGTTTGAGCTCACGGGCAAGGTGGAGGCTGAGCT...GGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS GCA 90 bp GAGACTCATCTCCCAGGAAGTCCCCATCGTCCCAGGAGCCCACTGTaGCGTCAGTGGCCTGATACCGGACCTCCACGCACAGGCTGGTCT +
Preference number: 5 (lower is better)
Translates to: ETHLPGSPHRPRSPL*RQWPDTGPPRTGWS
Trigger: AGACCAGCCTGTGCGTGGAGGTCCGGTATCAGGCCACTGACGGCACAGTGGGCTCCTGGGACGATGGGGACTTCCTGGGAGATGAGTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS GCA 90 bp GTACTCGAGCTGAGGTGGGAAGCGGGGTGGGCAGTACGCCTCGTCTaGCATCTTCACCAGGGGTTTGGCGAAGGTCCGGCCCATGAAGTC +
Preference number: 5 (lower is better)
Translates to: VLELRWEAGWAVRLV*HLHQGFGEGPAHEV
Trigger: GACTTCATGGGCCGGACCTTCGCCAAACCCCTGGTGAAGATGGCAGACGAGGCGTACTGCCCACCCCGCTTCCCACCTCAGCTCGAGTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS CCA 90 bp CATGCCGTAGGTGGAGTCGTAGCCGGCTTCCCGGGACACGTCCTCTaGGAGTGGCACTTTGTACACGCAGAGGGAGCCCTTGAAGCGTCC +
Preference number: 5 (lower is better)
Translates to: HAVGGVVAGFPGHVL*EWHFVHAEGALEAS
Trigger: GGACGCTTCAAGGGCTCCCTCTGCGTGTACAAAGTGCCACTCCCAGAGGACGTGTCCCGGGAAGCCGGCTACGACTCCACCTACGGCATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GGGCAGCACTTGACGGGCCAGCTCCCAGCTGCAGCTGAAAGGGCTGGAAGGGCAAGCTCCGAGACTGTCTaGAGGTGGATGAGCAAGGCC +
Preference number: 5 (lower is better)
Translates to: GQHLTGQLPAAAERAGRASSETV*RWMSKA
Trigger: GGCCTTGCTCATCCACCTCAAGACAGTCTCGGAGCT...TGCCCTTCCAGCCCTTTCAGCTGCAGCTGGGAGCTGGCCCGTCAAGTGCTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CAA 90 bp GGGCAGCACTTGACGGGCCAGCTCCCAGCTGCAGCTGAAAGGGCTGGAAGGGCATCTTCGTCGGTCTCATaGGCCTTGTGGGGCGTCTTG +
Preference number: 5 (lower is better)
Translates to: GQHLTGQLPAAAERAGRASSSVS*ALWGVL
Trigger: CAAGACGCCCCACAAGGCCAATGAGACCGACGAAGA...TGCCCTTCCAGCCCTTTCAGCTGCAGCTGGGAGCTGGCCCGTCAAGTGCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CAA 90 bp GTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTCACGGCGGGCCAGCAAAGAAGACTaGCACGTAGGGGTCCACGAG +
Preference number: 5 (lower is better)
Translates to: VWPLLRIKDRCYLQGSRRASKED*HVGVHE
Trigger: CTCGTGGACCCCTACGTGCAAGTCTTCTTTGCTGGC...CCGCCGTGACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CAA 90 bp TCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCAGGGGAGACTGGTGAGCTCAGGGTaGGAGGTGTCTACGATCTCC +
Preference number: 5 (lower is better)
Translates to: SAQGMKSGRWAPQAPQGRLVSSG*EVSTIS
Trigger: GGAGATCGTAGACACCTCCAACCCTGAGCTCACCAG...TCTCCCCTGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CAA 90 bp TGGAAACCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGTCCCTCATGCAGGACTaGAGGCGCTCCCGGTCAAGC +
Preference number: 5 (lower is better)
Translates to: WKPTGRTGDPLGSERSQVSLMQD*RRSRSS
Trigger: GCTTGACCGGGAGCGCCTCAAGTCCTGCATGAGGGA...CACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGGTTTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTCACGGCGGAAGAGCGTCTTGACCTaGGCGCAGTCCTTGCCAGTC +
Preference number: 5 (lower is better)
Translates to: VWPLLRIKDRCYLQGSRRKSVLT*AQSLPV
Trigger: GACTGGCAAGGACTGCGCCAAGGTCAAGACGCTCTT...CCGCCGTGACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp TGGGCAGGGTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTAACTCCTTGCGCTGTTaGCTGAGGCCCAGCCACAGG +
Preference number: 5 (lower is better)
Translates to: WAGSGPCCGSKTGAICRGNSLRC*LRPSHR
Trigger: CCTGTGGCTGGGCCTCAGCAAACAGCGCAAGGAGTT...ACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGACCCTGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp CAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAAACTCCTTGCGCTGTTaGCTGAGGCCCAGCCACAGG +
Preference number: 5 (lower is better)
Translates to: QATPWEVRGAKWSPAVAENSLRC*LRPSHR
Trigger: CCTGTGGCTGGGCCTCAGCAAACAGCGCAAGGAGTT...TTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp TGGAAACCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGCCGCACAGGAACTCCTaGCGCTGTTTGCTGAGGCCC +
Preference number: 5 (lower is better)
Translates to: WKPTGRTGDPLGSERSQVPHRNS*RCLLRP
Trigger: GGGCCTCAGCAAACAGCGCAAGGAGTTCCTGTGCGG...CACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGGTTTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp TGGGCAGGGTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTATCTTCACCAGGGGTTaGGCGAAGGTCCGGCCCATG +
Preference number: 5 (lower is better)
Translates to: WAGSGPCCGSKTGAICRGIFTRG*AKVRPM
Trigger: CATGGGCCGGACCTTCGCCAAACCCCTGGTGAAGAT...ACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGACCCTGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GAGGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCTTCAGGCCCTCGGTATaGTCCACTTCCTCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: EAGSAQGMKSGRWAPQAPFRPSV*STSSFS
Trigger: GGAGAAGGAGGAAGTGGACAATACCGAGGGCCTGAA...GGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGCTTCAGGCCCTCGGTATaGTCCACTTCCTCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: GAKWSPAVAEAAALGLVGFRPSV*STSSFS
Trigger: GGAGAAGGAGGAAGTGGACAATACCGAGGGCCTGAA...GCCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp TCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCAGGGGAGACCTCTTTGGCAGCCCTaGCCTTCTCCTTGCCCTTCA +
Preference number: 5 (lower is better)
Translates to: SAQGMKSGRWAPQAPQGRPLWQP*PSPCPS
Trigger: TGAAGGGCAAGGAGAAGGCAAGGGCTGCCAAAGAGG...TCTCCCCTGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp AGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTCTGGGAGTGGCACTTaGTACACGCAGAGGGAGCCC +
Preference number: 5 (lower is better)
Translates to: SERSQVEPSSGRSSRAGTSGSGT*YTQREP
Trigger: GGGCTCCCTCTGCGTGTACAAAGTGCCACTCCCAGA...AGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGCACATTGATGGGGTCATaGCTCGGGATGCCCTGGAAC +
Preference number: 5 (lower is better)
Translates to: GAKWSPAVAEAAALGLVGTLMGS*LGMPWN
Trigger: GTTCCAGGGCATCCCGAGCAATGACCCCATCAATGT...GCCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp TGGGCAGGGTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTCCAGTGAAGACGCGGTaGGCCACCTTCACTCTCCCA +
Preference number: 5 (lower is better)
Translates to: WAGSGPCCGSKTGAICRGPVKTR*ATFTLP
Trigger: TGGGAGAGTGAAGGTGGCCAACCGCGTCTTCACTGG...ACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGACCCTGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTACGTCTGTGTCCTGCTaGTCCTCCTGCTGGCCCTTC +
Preference number: 5 (lower is better)
Translates to: ERSQVEPSSGRSSRAGTCTSVSC*SSCWPF
Trigger: GAAGGGCCAGCAGGAGGACAAGCAGGACACAGACGT...ACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp TGGAAACCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGTCCATGGTGCACTGCTaGGCTGTCTTTGCGCCCCGC +
Preference number: 5 (lower is better)
Translates to: WKPTGRTGDPLGSERSQVSMVHC*AVFAPR
Trigger: GCGGGGCGCAAAGACAGCCAAGCAGTGCACCATGGA...CACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGGTTTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp CCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCTTGACGCGCTTTTGCTaGAAGATGGACACGAGGGGC +
Preference number: 5 (lower is better)
Translates to: PTGRTGDPLGSERSQVEPLTRFC*KMDTRG
Trigger: GCCCCTCGTGTCCATCTTCAAGCAAAAGCGCGTCAA...GGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp CAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAAACTCATCGTTCTCATaGCGGGCCAGGAGGGGCCAC +
Preference number: 5 (lower is better)
Translates to: QATPWEVRGAKWSPAVAENSSFS*RARRGH
Trigger: GTGGCCCCTCCTGGCCCGCAATGAGAACGATGAGTT...TTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTAACTCATCGTTCTCATaGCGGGCCAGGAGGGGCCAC +
Preference number: 5 (lower is better)
Translates to: ERSQVEPSSGRSSRAGTCNSSFS*RARRGH
Trigger: GTGGCCCCTCCTGGCCCGCAATGAGAACGATGAGTT...ACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTCACGGCGGAGCTCAGCCTCCACCTaGCCCGTGAGCTCAAACTCA +
Preference number: 5 (lower is better)
Translates to: VWPLLRIKDRCYLQGSRRSSAST*PVSSNS
Trigger: TGAGTTTGAGCTCACGGGCAAGGTGGAGGCTGAGCT...CCGCCGTGACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp TCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCAGGGGAGAAGCTCAGCCTCCACCTaGCCCGTGAGCTCAAACTCA +
Preference number: 5 (lower is better)
Translates to: SAQGMKSGRWAPQAPQGRSSAST*PVSSNS
Trigger: TGAGTTTGAGCTCACGGGCAAGGTGGAGGCTGAGCT...TCTCCCCTGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp AGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGAATGCCTCCTCCCTGTaGATCAGGGGAGTGAGGGAC +
Preference number: 5 (lower is better)
Translates to: RSQVEPSSGRSSRAGTCGNASSL*IRGVRD
Trigger: GTCCCTCACTCCCCTGATCAACAGGGAGGAGGCATT...CCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402415.8
CDS TCA 90 bp ATGGGTACCTCTGGCTCCATAGTCACCACAACCTCCCCTGTGGAGTaGGAGGAGGAGCCCCCATTGCACAGCACACGGCAGCGCCGGAGA +
Preference number: 5 (lower is better)
Translates to: MGTSGSIVTTTSPVE*EEEPPLHSTRQRRR
Trigger: TCTCCGGCGCTGCCGTGTGCTGTGCAATGGGGGCTCCTCCTCTCACTCCACAGGGGAGGTTGTGGTGACTATGGAGCCAGAGGTACCCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000402415.8
ENST00000403946.7
CDS TCA 90 bp GGTGCAGGTCCGTGGCCCGGACCACATAGACTCGGACCAGCACATTaGTGGGGTCATTGCTCGGGATGCCCTGGAACATGCCGTAGGTGG +
Preference number: 5 (lower is better)
Translates to: GAGPWPGPHRLGPAH*WGHCSGCPGTCRRW
Trigger: CCACCTACGGCATGTTCCAGGGCATCCCGAGCAATGACCCCATCAATGTGCTGGTCCGAGTCTATGTGGTCCGGGCCACGGACCTGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS TCA 90 bp GGAAGTCGTCAGCGGAGAAGTGGTCCGCATCCCAGATCTGCAGGGTaGGCCGCGCGGGGATCTTGTACTCGGTCTCGTCCCAGGAGAACA +
Preference number: 5 (lower is better)
Translates to: GSRQRRSGPHPRSAG*AARGSCTRSRPRRT
Trigger: TGTTCTCCTGGGACGAGACCGAGTACAAGATCCCCGCGCGGCTCACCCTGCAGATCTGGGATGCGGACCACTTCTCCGCTGACGACTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS TCA 90 bp CAGGATGTGTCACACGAAGTTGCATGTTCCCAGCCAGCAGGGGGCTaGCCCCACCCGCCTTACCGCGTCCAGCTTCACCATGGTCTCCAG +
Preference number: 5 (lower is better)
Translates to: QDVSHEVACSQPAGG*PHPPYRVQLHHGLQ
Trigger: CTGGAGACCATGGTGAAGCTGGACGCGGTAAGGCGGGTGGGGTCAGCCCCCTGCTGGCTGGGAACATGCAACTTCGTGTGACACATCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426958.1
CDS CCA 90 bp AGCTCACAGGGCCTGGGCAGAACTCACGGCTACGGGGCTCAGGGCTaGCCAGAGACAGAGGGAAACCCTAGGACTGGATGTGCCAAGATC +
Preference number: 5 (lower is better)
Translates to: SSQGLGRTHGYGAQG*PETEGNPRTGCAKI
Trigger: GATCTTGGCACATCCAGTCCTAGGGTTTCCCTCTGTCTCTGGCCAGCCCTGAGCCCCGTAGCCGTGAGTTCTGCCCAGGCCCTGTGAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339598.8
CDS-3UTR CAA 90 bp TGGGCAGGGTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTAGCTCCGAGACTGTCTaGAGGTGGATGAGCAAGGCC +
Preference number: 5 (lower is better)
Translates to: WAGSGPCCGSKTGAICRGSSETV*RWMSKA
Trigger: GGCCTTGCTCATCCACCTCAAGACAGTCTCGGAGCT...ACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGACCCTGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CAA 90 bp GAGGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCATGGATGTGTACTTCTaGTCGTCACCCACCTCCACG +
Preference number: 5 (lower is better)
Translates to: EAGSAQGMKSGRWAPQAPMDVYF*SSPTST
Trigger: CGTGGAGGTGGGTGACGACAAGAAGTACACATCCAT...GGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CAA 90 bp CAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGTTCCCACGTCCATTTaGAAGGAGCCCACCAGGGTG +
Preference number: 5 (lower is better)
Translates to: QATPWEVRGAKWSPAVAEVPTSI*KEPTRV
Trigger: CACCCTGGTGGGCTCCTTCAAAATGGACGTGGGAAC...TTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CAA 90 bp GGGCAGCACTTGACGGGCCAGCTCCCAGCTGCAGCTGAAAGGGCTGGAAGGGCATCGGTCTCATTGGCCTaGTGGGGCGTCTTGATGTTG +
Preference number: 5 (lower is better)
Translates to: GQHLTGQLPAAAERAGRASVSLA*WGVLML
Trigger: CAACATCAAGACGCCCCACAAGGCCAATGAGACCGA...TGCCCTTCCAGCCCTTTCAGCTGCAGCTGGGAGCTGGCCCGTCAAGTGCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CAA 90 bp GGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCATTCTGCACTGAAGTCTaGCCCTTCTGGCCAGCAAAG +
Preference number: 5 (lower is better)
Translates to: GRLGPRHEEWTLGSSGSPFCTEV*PFWPAK
Trigger: CTTTGCTGGCCAGAAGGGCAAGACTTCAGTGCAGAA...TGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CAA 90 bp TGGGCAGGGTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTTTCTCCGGTCGATCATaGAGGCCTCCAGGAAGGCTC +
Preference number: 5 (lower is better)
Translates to: WAGSGPCCGSKTGAICRGFSGRS*RPPGRL
Trigger: GAGCCTTCCTGGAGGCCTCAATGATCGACCGGAGAA...ACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGACCCTGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CAA 90 bp GGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGCTTAAGGAAGAGCGTCTaGACCTTGGCGCAGTCCTTG +
Preference number: 5 (lower is better)
Translates to: GAKWSPAVAEAAALGLVGLRKSV*TLAQSL
Trigger: CAAGGACTGCGCCAAGGTCAAGACGCTCTTCCTTAA...GCCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp CAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCCCTTGCCTTCTCCTaGCCCTTCATTGACCCCTTC +
Preference number: 5 (lower is better)
Translates to: QATPWEVRGAKWSPAVAEALAFS*PFIDPF
Trigger: GAAGGGGTCAATGAAGGGCAAGGAGAAGGCAAGGGC...TTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGCCCTTGCCTTCTCCTaGCCCTTCATTGACCCCTTC +
Preference number: 5 (lower is better)
Translates to: ERSQVEPSSGRSSRAGTCALAFS*PFIDPF
Trigger: GAAGGGGTCAATGAAGGGCAAGGAGAAGGCAAGGGC...ACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GAGGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCTCATCATCCCCGGTCTaGCCCCGAAGCAAGTTGAAA +
Preference number: 5 (lower is better)
Translates to: EAGSAQGMKSGRWAPQAPSSSPV*PRSKLK
Trigger: TTTCAACTTGCTTCGGGGCAAGACCGGGGATGATGA...GGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp CAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAACTCGGACCAGCACATaGATGGGGTCATTGCTCGGG +
Preference number: 5 (lower is better)
Translates to: QATPWEVRGAKWSPAVAETRTST*MGSLLG
Trigger: CCCGAGCAATGACCCCATCAATGTGCTGGTCCGAGT...TTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTTCCACTTTGCCGTCTTaGCAGAGGCGGGTCAGGATC +
Preference number: 5 (lower is better)
Translates to: ERSQVEPSSGRSSRAGTCSTLPS*QRRVRI
Trigger: GATCCTGACCCGCCTCTGCAAAGACGGCAAAGTGGA...ACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp ATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTGCCCGGCTTGTCGGGGTaGAGCAGCGGCCTCGTCTCC +
Preference number: 5 (lower is better)
Translates to: ILYLEDLGRVSGVFLWSLPGLSG*SSGLVS
Trigger: GGAGACGAGGCCGCTGCTCAACCCCGACAAGCCGGG...CAGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp AGGCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCATGCTCGATGCCCGGCTaGTCGGGGTTGAGCAGCGGC +
Preference number: 5 (lower is better)
Translates to: RLPRGDGKESKPLKGNAACSMPG*SGLSSG
Trigger: GCCGCTGCTCAACCCCGACAAGCCGGGCATCGAGCA...TGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp TGGAAACCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGACGTCTGTGTCCTGCTaGTCCTCCTGCTGGCCCTTC +
Preference number: 5 (lower is better)
Translates to: WKPTGRTGDPLGSERSQVTSVSC*SSCWPF
Trigger: GAAGGGCCAGCAGGAGGACAAGCAGGACACAGACGT...CACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGGTTTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCAGGAGCCGCGCGGGGATCTaGTACTCGGTCTCGTCCCAG +
Preference number: 5 (lower is better)
Translates to: APQGRWERVQATERKCGRSRAGI*YSVSSQ
Trigger: CTGGGACGAGACCGAGTACAAGATCCCCGCGCGGCT...CCTGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTCACGGCGGTTGACGCGCTTTTGCTaGAAGATGGACACGAGGGGC +
Preference number: 5 (lower is better)
Translates to: VWPLLRIKDRCYLQGSRRLTRFC*KMDTRG
Trigger: GCCCCTCGTGTCCATCTTCAAGCAAAAGCGCGTCAA...CCGCCGTGACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCAGCCTTTGACGCGCTTTaGCTTGAAGATGGACACGAG +
Preference number: 5 (lower is better)
Translates to: GRLGPRHEEWTLGSSGSPAFDAL*LEDGHE
Trigger: CTCGTGTCCATCTTCAAGCAAAAGCGCGTCAAAGGC...TGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GGGCAGCACTTGACGGGCCAGCTCCCAGCTGCAGCTGAAAGGGCTGGAAGGGCAAGGAGCAGCAACAGTTaGAGGAGCAGCCAGCGATAC +
Preference number: 5 (lower is better)
Translates to: GQHLTGQLPAAAERAGRARSSNS*RSSQRY
Trigger: GTATCGCTGGCTGCTCCTCAAACTGTTGCTGCTCCT...TGCCCTTCCAGCCCTTTCAGCTGCAGCTGGGAGCTGGCCCGTCAAGTGCTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
CDS-3UTR CAA 90 bp GGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCAAGCGCCAGCACGATCTaGATGATGAGCCACTTGTAC +
Preference number: 5 (lower is better)
Translates to: GRLGPRHEEWTLGSSGSPSASTI*MMSHLY
Trigger: GTACAAGTGGCTCATCATCAAGATCGTGCTGGCGCT...TGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS TCA 90 bp CAGTCTTGCCTAGCCGGATGGCGATGTAGGGGTCAGCTTTGCCGTTaGTGTCAGCAGGGTGCAGGTCCGTGGCCCGGACCACATAGACTC +
Preference number: 5 (lower is better)
Translates to: QSCLAGWRCRGQLCR*CQQGAGPWPGPHRL
Trigger: GAGTCTATGTGGTCCGGGCCACGGACCTGCACCCTGCTGACATCAACGGCAAAGCTGACCCCTACATCGCCATCCGGCTAGGCAAGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS TCA 90 bp TGGGCTTCCTCTGACCGTTCTCGTCCTCAATCTCAGAGGGCCCAGTaGAGACGCGGTTGGCCACCTTCACTCTCCCAGGGGGCCCAAAGT +
Preference number: 5 (lower is better)
Translates to: WASSDRSRPQSQRAQ*RRGWPPSLSQGAQS
Trigger: ACTTTGGGCCCCCTGGGAGAGTGAAGGTGGCCAACCGCGTCTTCACTGGGCCCTCTGAGATTGAGGACGAGAACGGTCAGAGGAAGCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
ENST00000464574.1
CDS TCA 90 bp GGAACAGGGCGAGGAGGAGGAGCAGCAGCAGGAGCAGCAACAGTTTaGGGAGCAGCCAGCGATACGTGTGCCACAAGAAGTAGCGAGCCG +
Preference number: 5 (lower is better)
Translates to: GTGRGGGAAAGAATV*GAASDTCATRSSEP
Trigger: CGGCTCGCTACTTCTTGTGGCACACGTATCGCTGGCTGCTCCTCAAACTGTTGCTGCTCCTGCTGCTGCTCCTCCTCCTCGCCCTGTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
CDS TCA 90 bp CAGTCTTGCCTAGCCGGATGGCGATGTAGGGGTCAGCTTTGCCGTTaGTGTCAGCAGGGTGCAGGTCCGTGGCCTGGAATGGGGAGAAGG +
Preference number: 5 (lower is better)
Translates to: QSCLAGWRCRGQLCR*CQQGAGPWPGMGRR
Trigger: CCTTCTCCCCATTCCAGGCCACGGACCTGCACCCTGCTGACATCAACGGCAAAGCTGACCCCTACATCGCCATCCGGCTAGGCAAGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464574.1
CDS GCA 90 bp CCGGTTCATCTGGTCTTTGGGGCTCCTCCTTGTGAGACCGGTTTTTaGCGAGCTTCATGGCGGAGAACACGCTCCTCCCGGCTCTCCGGA +
Preference number: 5 (lower is better)
Translates to: PVHLVFGAPPCETGF*RASWRRTRSSRLSG
Trigger: TCCGGAGAGCCGGGAGGAGCGTGTTCTCCGCCATGAAGCTCGGCAAAAACCGGTCTCACAAGGAGGAGCCCCAAAGACCAGATGAACCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS CCA 90 bp GCCACGGTAGATCTGGTAGTACTCGAGCTGAGGTGGGAAGCGGGGTaGGCAGTACGCCTCGTCTGCCATCTTCACCAGGGGTTTGGCGAA +
Preference number: 5 (lower is better)
Translates to: ATVDLVVLELRWEAG*AVRLVCHLHQGFGE
Trigger: TTCGCCAAACCCCTGGTGAAGATGGCAGACGAGGCGTACTGCCCACCCCGCTTCCCACCTCAGCTCGAGTACTACCAGATCTACCGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS CCA 90 bp AGCTGTGGCGTTGCCACGGTAGATCTGGTAGTACTCGAGCTGAGGTaGGAAGCGGGGTGGGCAGTACGCCTCGTCTGCCATCTTCACCAG +
Preference number: 5 (lower is better)
Translates to: SCGVATVDLVVLELR*EAGWAVRLVCHLHQ
Trigger: CTGGTGAAGATGGCAGACGAGGCGTACTGCCCACCCCGCTTCCCACCTCAGCTCGAGTACTACCAGATCTACCGTGGCAACGCCACAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS CCA 90 bp GTAGGTGGAGTCGTAGCCGGCTTCCCGGGACACGTCCTCTGGGAGTaGCACTTTGTACACGCAGAGGGAGCCCTTGAAGCGTCCCACAAT +
Preference number: 5 (lower is better)
Translates to: VGGVVAGFPGHVLWE*HFVHAEGALEASHN
Trigger: ATTGTGGGACGCTTCAAGGGCTCCCTCTGCGTGTACAAAGTGCCACTCCCAGAGGACGTGTCCCGGGAAGCCGGCTACGACTCCACCTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp CCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCAAGGTCCCGATGAGCTaGTTGCTGAAGACTTTGCTG +
Preference number: 5 (lower is better)
Translates to: PTGRTGDPLGSERSQVEPKVPMS*LLKTLL
Trigger: CAGCAAAGTCTTCAGCAACAAGCTCATCGGGACCTT...GGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CAA 90 bp GAGGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCAAGGTCCCGATGAGCTaGTTGCTGAAGACTTTGCTG +
Preference number: 5 (lower is better)
Translates to: EAGSAQGMKSGRWAPQAPKVPMS*LLKTLL
Trigger: CAGCAAAGTCTTCAGCAACAAGCTCATCGGGACCTT...GGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CAA 90 bp GGGCAGCACTTGACGGGCCAGCTCCCAGCTGCAGCTGAAAGGGCTGGAAGGGCAATGGATGTGTACTTCTaGTCGTCACCCACCTCCACG +
Preference number: 5 (lower is better)
Translates to: GQHLTGQLPAAAERAGRAMDVYF*SSPTST
Trigger: CGTGGAGGTGGGTGACGACAAGAAGTACACATCCAT...TGCCCTTCCAGCCCTTTCAGCTGCAGCTGGGAGCTGGCCCGTCAAGTGCTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CAA 90 bp TGGGCAGGGTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTTTGATGTTGTCCCCTTaGCCCACCACGGCAACGTCA +
Preference number: 5 (lower is better)
Translates to: WAGSGPCCGSKTGAICRGLMLSP*PTTATS
Trigger: TGACGTTGCCGTGGTGGGCAAAGGGGACAACATCAA...ACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGACCCTGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CAA 90 bp CCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCGTGGGCAGGAAGCCTTaGTCTCCGTCATTAGAAATC +
Preference number: 5 (lower is better)
Translates to: PTGRTGDPLGSERSQVEPVGRKP*SPSLEI
Trigger: GATTTCTAATGACGGAGACAAAGGCTTCCTGCCCAC...GGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CAA 90 bp CAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAAGGCCTTCTTCCAGCTaGTCGGCAATGTGGTCCATG +
Preference number: 5 (lower is better)
Translates to: QATPWEVRGAKWSPAVAERPSSS*SAMWSM
Trigger: CATGGACCACATTGCCGACAAGCTGGAAGAAGGCCT...TTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CAA 90 bp GCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCAGGTCCCTCATGCAGGACTaGAGGCGCTCCCGGTCAAGC +
Preference number: 5 (lower is better)
Translates to: APQGRWERVQATERKCGRSLMQD*RRSRSS
Trigger: GCTTGACCGGGAGCGCCTCAAGTCCTGCATGAGGGA...CCTGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp TCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCAGGGGAGACCCATGAAGTCAGCTTaGCCCATGGAATCCTGGTCA +
Preference number: 5 (lower is better)
Translates to: SAQGMKSGRWAPQAPQGRPMKSA*PMESWS
Trigger: TGACCAGGATTCCATGGGCAAAGCTGACTTCATGGG...TCTCCCCTGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCATCAGCCACATCCACCTaGACAACAGCTTCAGAAGTC +
Preference number: 5 (lower is better)
Translates to: GRLGPRHEEWTLGSSGSPSATST*TTASEV
Trigger: GACTTCTGAAGCTGTTGTCAAGGTGGATGTGGCTGA...TGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGCTCCAGAGGGCTCTTGTaGTCGAAGTTGCTCCTTCAT +
Preference number: 5 (lower is better)
Translates to: GAKWSPAVAEAAALGLVGSRGLL*SKLLLH
Trigger: ATGAAGGAGCAACTTCGACAACAAGAGCCCTCTGGA...GCCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp CAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAATTCAGGCCCTCGGTATaGTCCACTTCCTCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: QATPWEVRGAKWSPAVAEFRPSV*STSSFS
Trigger: GGAGAAGGAGGAAGTGGACAATACCGAGGGCCTGAA...TTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp TGGAAACCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGCCTCTTTGGCAGCCCTaGCCTTCTCCTTGCCCTTCA +
Preference number: 5 (lower is better)
Translates to: WKPTGRTGDPLGSERSQVPLWQP*PSPCPS
Trigger: TGAAGGGCAAGGAGAAGGCAAGGGCTGCCAAAGAGG...CACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGGTTTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GAGGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCTCGGACTCCAGCTCTTaGGGGTATACCTTAAGCTCA +
Preference number: 5 (lower is better)
Translates to: EAGSAQGMKSGRWAPQAPSDSSS*GYTLSS
Trigger: TGAGCTTAAGGTATACCCCAAAGAGCTGGAGTCCGA...GGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp AGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGTCATCATCCCCGGTCTaGCCCCGAAGCAAGTTGAAA +
Preference number: 5 (lower is better)
Translates to: RSQVEPSSGRSSRAGTCGSSSPV*PRSKLK
Trigger: TTTCAACTTGCTTCGGGGCAAGACCGGGGATGATGA...CCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp TGGAAACCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGCGCAGCTCGTACTTCTaGGGCTTCCGAGGTGAGATG +
Preference number: 5 (lower is better)
Translates to: WKPTGRTGDPLGSERSQVRSSYF*GFRGEM
Trigger: CATCTCACCTCGGAAGCCCAAGAAGTACGAGCTGCG...CACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGGTTTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp AGGCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCAAGCCGCGCGGGGATCTaGTACTCGGTCTCGTCCCAG +
Preference number: 5 (lower is better)
Translates to: RLPRGDGKESKPLKGNAASRAGI*YSVSSQ
Trigger: CTGGGACGAGACCGAGTACAAGATCCCCGCGCGGCT...TGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTCACGGCGGGCCTTTGACGCGCTTTaGCTTGAAGATGGACACGAG +
Preference number: 5 (lower is better)
Translates to: VWPLLRIKDRCYLQGSRRAFDAL*LEDGHE
Trigger: CTCGTGTCCATCTTCAAGCAAAAGCGCGTCAAAGGC...CCGCCGTGACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp ATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTGAGGGGGTCAGGTTCATaGCGGGCCAGGCCCACTGGG +
Preference number: 5 (lower is better)
Translates to: ILYLEDLGRVSGVFLWSLRGSGS*RARPTG
Trigger: CCCAGTGGGCCTGGCCCGCAATGAACCTGACCCCCT...CAGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GAGGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCAGGTACTTGATGGACTaGAGAGGGTTGAGGAACCAG +
Preference number: 5 (lower is better)
Translates to: EAGSAQGMKSGRWAPQAPRYLMD*RGLRNQ
Trigger: CTGGTTCCTCAACCCTCTCAAGTCCATCAAGTACCT...GGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GGGCAGCACTTGACGGGCCAGCTCCCAGCTGCAGCTGAAAGGGCTGGAAGGGCAGCTTCAATCCTGTACTaGGAAGACCTGGGGAGGGTT +
Preference number: 5 (lower is better)
Translates to: GQHLTGQLPAAAERAGRAASILY*EDLGRV
Trigger: AACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGC...TGCCCTTCCAGCCCTTTCAGCTGCAGCTGGGAGCTGGCCCGTCAAGTGCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp TCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCAGGGGAGAGCTTCAATCCTGTACTaGGAAGACCTGGGGAGGGTT +
Preference number: 5 (lower is better)
Translates to: SAQGMKSGRWAPQAPQGRASILY*EDLGRV
Trigger: AACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGC...TCTCCCCTGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS TCA 90 bp AGGAAGTCCCCATCGTCCCAGGAGCCCACTGTGCCGTCAGTGGCCTaGTACCGGACCTCCACGCACAGGCTGGTCTTGATGATAGCATTG +
Preference number: 5 (lower is better)
Translates to: RKSPSSQEPTVPSVA*YRTSTHRLVLMIAL
Trigger: CAATGCTATCATCAAGACCAGCCTGTGCGTGGAGGTCCGGTATCAGGCCACTGACGGCACAGTGGGCTCCTGGGACGATGGGGACTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS TCA 90 bp GGAACTGGTGCTCTGGCTGCGAGTACACGGTTCCCACGTCCATTTTaGAGGAGCCCACCAGGGTGCCACTGCGCAGCAGGTTCTTGGAGT +
Preference number: 5 (lower is better)
Translates to: GTGALAASTRFPRPF*RSPPGCHCAAGSWS
Trigger: ACTCCAAGAACCTGCTGCGCAGTGGCACCCTGGTGGGCTCCTTCAAAATGGACGTGGGAACCGTGTACTCGCAGCCAGAGCACCAGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS TCA 90 bp TGTTGGCATTGTAGAGGCGGCGGCGCTGGTCCGGCCACCAGCTCTTaGTGTAGATGCAGGGCTTTCGCTCCAGGTAGGGCAGATGGAAGT +
Preference number: 5 (lower is better)
Translates to: CWHCRGGGAGPATSS*CRCRAFAPGRADGS
Trigger: ACTTCCATCTGCCCTACCTGGAGCGAAAGCCCTGCATCTACATCAAGAGCTGGTGGCCGGACCAGCGCCGCCGCCTCTACAATGCCAACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS TCA 90 bp GTATGTCGTTCAGGCCTTCTTCCAGCTTGTCGGCAATGTGGTCCATaGTGTTGGCATTGTAGAGGCGGCGGCGCTGGTCCGGCCACCAGC +
Preference number: 5 (lower is better)
Translates to: VCRSGLLPACRQCGP*CWHCRGGGAGPATS
Trigger: GCTGGTGGCCGGACCAGCGCCGCCGCCTCTACAATGCCAACATCATGGACCACATTGCCGACAAGCTGGAAGAAGGCCTGAACGACATAC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS TCA 90 bp TGTGCACTGACTCTGATTGATGAAGAAGACGCGGGCAAAGGGGTCTaGGAGTCCGCTGCTGTCGGCGGCAAAGAGGCTGCGGGCCTGGTA +
Preference number: 5 (lower is better)
Translates to: CALTLIDEEDAGKGV*ESAAVGGKEAAGLV
Trigger: TACCAGGCCCGCAGCCTCTTTGCCGCCGACAGCAGCGGACTCTCAGACCCCTTTGCCCGCGTCTTCTTCATCAATCAGAGTCAGTGCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS CCA 90 bp GTCTTTGGGGCTCCTCCTTGTGAGACCGGTTTTTGCCGAGCTTCATaGCGGAGAACACGCTCCTCCCGGCTCTCCGGAAGCTCTTCTCTC +
Preference number: 5 (lower is better)
Translates to: VFGAPPCETGFCRAS*RRTRSSRLSGSSSL
Trigger: GAGAGAAGAGCTTCCGGAGAGCCGGGAGGAGCGTGTTCTCCGCCATGAAGCTCGGCAAAAACCGGTCTCACAAGGAGGAGCCCCAAAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS CCA 90 bp CCTCGTTCAGGTCCTGATGCTCATCCAGCAGCGTGTAGTTACGTGTaGAGCCGTACATGTTCACCCAGGCTGGGCCCAGTGTGGGCAGGA +
Preference number: 5 (lower is better)
Translates to: PRSGPDAHPAACSYV*SRTCSPRLGPVWAG
Trigger: TCCTGCCCACACTGGGCCCAGCCTGGGTGAACATGTACGGCTCCACACGTAACTACACGCTGCTGGATGAGCATCAGGACCTGAACGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS CCA 90 bp GGCCGTCCACTTTGCCGTCTTTGCAGAGGCGGGTCAGGATCTGGCTaGGCTTCATGGGGTCCCGCCAGATATTGTAGCCATGTGTGGAGT +
Preference number: 5 (lower is better)
Translates to: GRPLCRLCRGGSGSG*ASWGPARYCSHVWS
Trigger: ACTCCACACATGGCTACAATATCTGGCGGGACCCCATGAAGCCCAGCCAGATCCTGACCCGCCTCTGCAAAGACGGCAAAGTGGACGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
ENST00000464574.1
CDS-3UTR CAA 90 bp AGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGGTGGGCAGGAAGCCTTaGTCTCCGTCATTAGAAATC +
Preference number: 5 (lower is better)
Translates to: RSQVEPSSGRSSRAGTCGVGRKP*SPSLEI
Trigger: GATTTCTAATGACGGAGACAAAGGCTTCCTGCCCAC...CCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CAA 90 bp GAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTCGGCCTCGTCATCACTaGCGTTCTGAATCAGGTCTA +
Preference number: 5 (lower is better)
Translates to: ERSQVEPSSGRSSRAGTCRPRHH*RSESGL
Trigger: TAGACCTGATTCAGAACGCAAGTGATGACGAGGCCG...ACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CAA 90 bp GGGCAGCACTTGACGGGCCAGCTCCCAGCTGCAGCTGAAAGGGCTGGAAGGGCAGCGACACGCTTGTTGTaGCTCATCATCCAGATGAAG +
Preference number: 5 (lower is better)
Translates to: GQHLTGQLPAAAERAGRAATRLL*LIIQMK
Trigger: CTTCATCTGGATGATGAGCAACAACAAGCGTGTCGC...TGCCCTTCCAGCCCTTTCAGCTGCAGCTGGGAGCTGGCCCGTCAAGTGCTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp TCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCAGGGGAGAGCGACACGCTTGTTGTaGCTCATCATCCAGATGAAG +
Preference number: 5 (lower is better)
Translates to: SAQGMKSGRWAPQAPQGRATRLL*LIIQMK
Trigger: CTTCATCTGGATGATGAGCAACAACAAGCGTGTCGC...TCTCCCCTGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp AGGCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCAACCTTGGCGCAGTCCTaGCCAGTCTCCTCCTCCACG +
Preference number: 5 (lower is better)
Translates to: RLPRGDGKESKPLKGNAATLAQS*PVSSST
Trigger: CGTGGAGGAGGAGACTGGCAAGGACTGCGCCAAGGT...TGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCAGGAGGTACAGCTCCACCTaGGCCTGCACTGTCCAGCCT +
Preference number: 5 (lower is better)
Translates to: APQGRWERVQATERKCGRRYSST*ACTVQP
Trigger: AGGCTGGACAGTGCAGGCCAAGGTGGAGCTGTACCT...CCTGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCAGGATCTTCACCAGGGGTTaGGCGAAGGTCCGGCCCATG +
Preference number: 5 (lower is better)
Translates to: APQGRWERVQATERKCGRIFTRG*AKVRPM
Trigger: CATGGGCCGGACCTTCGCCAAACCCCTGGTGAAGAT...CCTGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGCTCCACTTCAAACCACTaGACGAGGGTGTTGAAGTTG +
Preference number: 5 (lower is better)
Translates to: GAKWSPAVAEAAALGLVGSTSNH*TRVLKL
Trigger: CAACTTCAACACCCTCGTCAAGTGGTTTGAAGTGGA...GCCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp TCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCAGGGGAGATCGGACTCCAGCTCTTaGGGGTATACCTTAAGCTCA +
Preference number: 5 (lower is better)
Translates to: SAQGMKSGRWAPQAPQGRSDSSS*GYTLSS
Trigger: TGAGCTTAAGGTATACCCCAAAGAGCTGGAGTCCGA...TCTCCCCTGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCAGGTCGCGGATGTCAGTCTaGCCTAGCCGGATGGCGATG +
Preference number: 5 (lower is better)
Translates to: APQGRWERVQATERKCGRSRMSV*PSRMAM
Trigger: CATCGCCATCCGGCTAGGCAAGACTGACATCCGCGA...CCTGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GGCAGGCTCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCAAACATGGACTCCTTCTaGGAGATGACGATCTTCTCC +
Preference number: 5 (lower is better)
Translates to: GRLGPRHEEWTLGSSGSPNMDSF*EMTIFS
Trigger: GGAGAAGATCGTCATCTCCAAGAAGGAGTCCATGTT...TGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGAGCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp CAACATGAGCAGCCCCAACAGCGCCAGCACGATCTTGATGATGAGCCACTTGTAAGGGGGTCAGGTTCATaGCGGGCCAGGCCCACTGGG +
Preference number: 5 (lower is better)
Translates to: QHEQPQQRQHDLDDEPLVRGSGS*RARPTG
Trigger: CCCAGTGGGCCTGGCCCGCAATGAACCTGACCCCCT...TACAAGTGGCTCATCATCAAGATCGTGCTGGCGCTGTTGGGGCTGCTCATGTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
CDS-3UTR CAA 90 bp AATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTAGGGGGTCAGGTTCATaGCGGGCCAGGCCCACTGGG +
Preference number: 5 (lower is better)
Translates to: NPVLGRPGEGFRSLPLEPRGSGS*RARPTG
Trigger: CCCAGTGGGCCTGGCCCGCAATGAACCTGACCCCCT...AGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp AGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGAGGTACTTGATGGACTaGAGAGGGTTGAGGAACCAG +
Preference number: 5 (lower is better)
Translates to: RSQVEPSSGRSSRAGTCGRYLMD*RGLRNQ
Trigger: CTGGTTCCTCAACCCTCTCAAGTCCATCAAGTACCT...CCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTTTGATGATGAGCCACTaGTACCGGGTGCAGATGAGG +
Preference number: 5 (lower is better)
Translates to: ERSQVEPSSGRSSRAGTCLMMSH*YRVQMR
Trigger: CCTCATCTGCACCCGGTACAAGTGGCTCATCATCAA...ACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp CAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAAGCGCCAGCACGATCTaGATGATGAGCCACTTGTAC +
Preference number: 5 (lower is better)
Translates to: QATPWEVRGAKWSPAVAESASTI*MMSHLY
Trigger: GTACAAGTGGCTCATCATCAAGATCGTGCTGGCGCT...TTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTAGCGCCAGCACGATCTaGATGATGAGCCACTTGTAC +
Preference number: 5 (lower is better)
Translates to: ERSQVEPSSGRSSRAGTCSASTI*MMSHLY
Trigger: GTACAAGTGGCTCATCATCAAGATCGTGCTGGCGCT...ACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp CAACATGAGCAGCCCCAACAGCGCCAGCACGATCTTGATGATGAGCCACTTGTAAGGCAGGGGCAGCACTaGACGGGCCAGCTCCCAGCT +
Preference number: 5 (lower is better)
Translates to: QHEQPQQRQHDLDDEPLVRQGQH*TGQLPA
Trigger: AGCTGGGAGCTGGCCCGTCAAGTGCTGCCCCTGCCT...TACAAGTGGCTCATCATCAAGATCGTGCTGGCGCTGTTGGGGCTGCTCATGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
CDS-3UTR CAA 90 bp AATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTAGGCAGGGGCAGCACTaGACGGGCCAGCTCCCAGCT +
Preference number: 5 (lower is better)
Translates to: NPVLGRPGEGFRSLPLEPRQGQH*TGQLPA
Trigger: AGCTGGGAGCTGGCCCGTCAAGTGCTGCCCCTGCCT...AGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS TCA 90 bp CCTGGGAGCAGTCCATCCGTCTCTTGGCTGTCCTTCTCTTCCTCTTaGAGAGACTCATCTCCCAGGAAGTCCCCATCGTCCCAGGAGCCC +
Preference number: 5 (lower is better)
Translates to: PGSSPSVSWLSFSSS*RDSSPRKSPSSQEP
Trigger: GGGCTCCTGGGACGATGGGGACTTCCTGGGAGATGAGTCTCTTCAAGAGGAAGAGAAGGACAGCCAAGAGACGGATGGACTGCTCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS TCA 90 bp CCAGGACGCCCCGCAGGCGACGCTCAGGGTAGGACTTCTCCGTTTTaGTCATCTCCTGTATGTCGTTCAGGCCTTCTTCCAGCTTGTCGG +
Preference number: 5 (lower is better)
Translates to: PGRPAGDAQGRTSPF*SSPVCRSGLLPACR
Trigger: CCGACAAGCTGGAAGAAGGCCTGAACGACATACAGGAGATGATCAAAACGGAGAAGTCCTACCCTGAGCGTCGCCTGCGGGGCGTCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS GCA 90 bp GTTCTTCTTATAATTGTGGATCAGGGACGACTGCACCCCCTTCCCTaGACACTCGATGTCCACCCGTGGCCGGTCCACCTGGGCCAGGTT +
Preference number: 5 (lower is better)
Translates to: VLLIIVDQGRLHPLP*TLDVHPWPVHLGQV
Trigger: AACCTGGCCCAGGTGGACCGGCCACGGGTGGACATCGAGTGTGCAGGGAAGGGGGTGCAGTCGTCCCTGATCCACAATTATAAGAAGAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
ENST00000426958.1
CDS CCA 90 bp CGCGTCCAGCTTCACCATGGTCTCCAGTTTCTTGATGGGTACCTCTaGCTCCATAGTCACCACAACCTCCCCCGTGGTGTTCCAGCTGGG +
Preference number: 5 (lower is better)
Translates to: RVQLHHGLQFLDGYL*LHSHHNLPRGVPAG
Trigger: CCCAGCTGGAACACCACGGGGGAGGTTGTGGTGACTATGGAGCCAGAGGTACCCATCAAGAAACTGGAGACCATGGTGAAGCTGGACGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338581.10
ENST00000339598.8
ENST00000426958.1
CDS-3UTR CAA 90 bp ATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTGCCTCGGAAAGTCACTTaGGCGATCCGGTCGCCCCTG +
Preference number: 5 (lower is better)
Translates to: ILYLEDLGRVSGVFLWSLPRKVT*AIRSPL
Trigger: CAGGGGCGACCGGATCGCCAAAGTGACTTTCCGAGG...CAGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CAA 90 bp TCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCAGGGGAGAACGCACAGGCTGGTCTaGATGATAGCATTGTTGTCA +
Preference number: 5 (lower is better)
Translates to: SAQGMKSGRWAPQAPQGRTHRLV*MIALLS
Trigger: TGACAACAATGCTATCATCAAGACCAGCCTGTGCGT...TCTCCCCTGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CAA 90 bp AGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGGGCTTAGATCGCTTGTaGGAGACATTAGTGGTGAGA +
Preference number: 5 (lower is better)
Translates to: RSQVEPSSGRSSRAGTCGGLDRL*ETLVVR
Trigger: TCTCACCACTAATGTCTCCAACAAGCGATCTAAGCC...CCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CAA 90 bp CCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCAAAGCCTTCTTTACATaGGCCATGAGGCTTGTGTTC +
Preference number: 5 (lower is better)
Translates to: PTGRTGDPLGSERSQVEPKAFFT*AMRLVF
Trigger: GAACACAAGCCTCATGGCCAATGTAAAGAAGGCTTT...GGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CAA 90 bp AGGCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCAGCCACGTCGTTGACCTaGTCCGAGTCTCGGATCTGC +
Preference number: 5 (lower is better)
Translates to: RLPRGDGKESKPLKGNAAATSLT*SESRIC
Trigger: GCAGATCCGAGACTCGGACAAGGTCAACGACGTGGC...TGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CAA 90 bp GTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTCACGGCGGCCGTCATTAGAAATCTaGCGCAGGTCAATGAAGTGG +
Preference number: 5 (lower is better)
Translates to: VWPLLRIKDRCYLQGSRRPSLEI*RRSMKW
Trigger: CCACTTCATTGACCTGCGCAAGATTTCTAATGACGG...CCGCCGTGACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CAA 90 bp ATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTGGAGTGGCCCTGGTCCTaGTCAGCGAGGGAGAGGAAG +
Preference number: 5 (lower is better)
Translates to: ILYLEDLGRVSGVFLWSLEWPWS*SARERK
Trigger: CTTCCTCTCCCTCGCTGACAAGGACCAGGGCCACTC...CAGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp CAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCGACACGCTTGTTGTaGCTCATCATCCAGATGAAG +
Preference number: 5 (lower is better)
Translates to: QATPWEVRGAKWSPAVAEATRLL*LIIQMK
Trigger: CTTCATCTGGATGATGAGCAACAACAAGCGTGTCGC...TTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGCGACACGCTTGTTGTaGCTCATCATCCAGATGAAG +
Preference number: 5 (lower is better)
Translates to: ERSQVEPSSGRSSRAGTCATRLL*LIIQMK
Trigger: CTTCATCTGGATGATGAGCAACAACAAGCGTGTCGC...ACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCAGGAAGAGCGTCTTGACCTaGGCGCAGTCCTTGCCAGTC +
Preference number: 5 (lower is better)
Translates to: APQGRWERVQATERKCGRKSVLT*AQSLPV
Trigger: GACTGGCAAGGACTGCGCCAAGGTCAAGACGCTCTT...CCTGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp TGGAAACCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGTTAAGGAAGAGCGTCTaGACCTTGGCGCAGTCCTTG +
Preference number: 5 (lower is better)
Translates to: WKPTGRTGDPLGSERSQVLRKSV*TLAQSL
Trigger: CAAGGACTGCGCCAAGGTCAAGACGCTCTTCCTTAA...CACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGGTTTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp TCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCAGGGGAGACACTTGACGAGGGTGTaGAAGTTGGGGTTCTTCTTA +
Preference number: 5 (lower is better)
Translates to: SAQGMKSGRWAPQAPQGRHLTRV*KLGFFL
Trigger: TAAGAAGAACCCCAACTTCAACACCCTCGTCAAGTG...TCTCCCCTGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp TCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCAGGGGAGATCCACTTCAAACCACTaGACGAGGGTGTTGAAGTTG +
Preference number: 5 (lower is better)
Translates to: SAQGMKSGRWAPQAPQGRSTSNH*TRVLKL
Trigger: CAACTTCAACACCCTCGTCAAGTGGTTTGAAGTGGA...TCTCCCCTGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp CAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAATCAGCCACATCCACCTaGACAACAGCTTCAGAAGTC +
Preference number: 5 (lower is better)
Translates to: QATPWEVRGAKWSPAVAESATST*TTASEV
Trigger: GACTTCTGAAGCTGTTGTCAAGGTGGATGTGGCTGA...TTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp AGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTCCAGAGGGCTCTTGTaGTCGAAGTTGCTCCTTCAT +
Preference number: 5 (lower is better)
Translates to: SERSQVEPSSGRSSRAGTSRGLL*SKLLLH
Trigger: ATGAAGGAGCAACTTCGACAACAAGAGCCCTCTGGA...AGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp AGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTGGGAATTCCAGAGGGCTCTaGTTGTCGAAGTTGCTCCTT +
Preference number: 5 (lower is better)
Translates to: RSQVEPSSGRSSRAGTCGNSRGL*LSKLLL
Trigger: AAGGAGCAACTTCGACAACAAGAGCCCTCTGGAATT...CCCACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp TGGGCAGGGTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTTCGGACTCCAGCTCTTaGGGGTATACCTTAAGCTCA +
Preference number: 5 (lower is better)
Translates to: WAGSGPCCGSKTGAICRGSDSSS*GYTLSS
Trigger: TGAGCTTAAGGTATACCCCAAAGAGCTGGAGTCCGA...ACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGACCCTGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp CAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAATCGGACTCCAGCTCTTaGGGGTATACCTTAAGCTCA +
Preference number: 5 (lower is better)
Translates to: QATPWEVRGAKWSPAVAESDSSS*GYTLSS
Trigger: TGAGCTTAAGGTATACCCCAAAGAGCTGGAGTCCGA...TTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp TGGAAACCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGTCATCATCCCCGGTCTaGCCCCGAAGCAAGTTGAAA +
Preference number: 5 (lower is better)
Translates to: WKPTGRTGDPLGSERSQVSSSPV*PRSKLK
Trigger: TTTCAACTTGCTTCGGGGCAAGACCGGGGATGATGA...CACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGGTTTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCAGGCGCAGCTCGTACTTCTaGGGCTTCCGAGGTGAGATG +
Preference number: 5 (lower is better)
Translates to: APQGRWERVQATERKCGRRSSYF*GFRGEM
Trigger: CATCTCACCTCGGAAGCCCAAGAAGTACGAGCTGCG...CCTGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp AGGCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCAAACTCATCGTTCTCATaGCGGGCCAGGAGGGGCCAC +
Preference number: 5 (lower is better)
Translates to: RLPRGDGKESKPLKGNAANSSFS*RARRGH
Trigger: GTGGCCCCTCCTGGCCCGCAATGAGAACGATGAGTT...TGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp AGGAAGAGCCCCAACATGAGCAGCCCCAACAGCGCCAGCACGATCTTGATGATGAACTCATCGTTCTCATaGCGGGCCAGGAGGGGCCAC +
Preference number: 5 (lower is better)
Translates to: RKSPNMSSPNSASTILMMNSSFS*RARRGH
Trigger: GTGGCCCCTCCTGGCCCGCAATGAGAACGATGAGTT...CATCATCAAGATCGTGCTGGCGCTGTTGGGGCTGCTCATGTTGGGGCTCTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
CDS-3UTR CAA 90 bp TGGGCAGGGTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTAGGTACTTGATGGACTaGAGAGGGTTGAGGAACCAG +
Preference number: 5 (lower is better)
Translates to: WAGSGPCCGSKTGAICRGRYLMD*RGLRNQ
Trigger: CTGGTTCCTCAACCCTCTCAAGTCCATCAAGTACCT...ACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGACCCTGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp AGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTAGGTACTTGATGGACTaGAGAGGGTTGAGGAACCAG +
Preference number: 5 (lower is better)
Translates to: SERSQVEPSSGRSSRAGTRYLMD*RGLRNQ
Trigger: CTGGTTCCTCAACCCTCTCAAGTCCATCAAGTACCT...AGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTAGGTACTTGATGGACTaGAGAGGGTTGAGGAACCAG +
Preference number: 5 (lower is better)
Translates to: ERSQVEPSSGRSSRAGTCRYLMD*RGLRNQ
Trigger: CTGGTTCCTCAACCCTCTCAAGTCCATCAAGTACCT...ACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp TGGAAACCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGTTGATGATGAGCCACTaGTACCGGGTGCAGATGAGG +
Preference number: 5 (lower is better)
Translates to: WKPTGRTGDPLGSERSQVLMMSH*YRVQMR
Trigger: CCTCATCTGCACCCGGTACAAGTGGCTCATCATCAA...CACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGGTTTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp TGGAAACCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGAGCGCCAGCACGATCTaGATGATGAGCCACTTGTAC +
Preference number: 5 (lower is better)
Translates to: WKPTGRTGDPLGSERSQVSASTI*MMSHLY
Trigger: GTACAAGTGGCTCATCATCAAGATCGTGCTGGCGCT...CACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGGTTTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS TCA 90 bp ATGGGGGTTCTTCAGTTCCTGAAGGAAGAAGCCACCTCTGGGCTGTaGGTCTGTGGCTCTGGTGAGCTCACAGGGCCTGGGCAGAACTCA +
Preference number: 5 (lower is better)
Translates to: MGVLQFLKEEATSGL*VCGSGELTGPGQNS
Trigger: TGAGTTCTGCCCAGGCCCTGTGAGCTCACCAGAGCCACAGACTCACAGCCCAGAGGTGGCTTCTTCCTTCAGGAACTGAAGAACCCCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
CDS TCA 90 bp CTCCGTTTTGATCATCTCCTGTATGTCGTTCAGGCCTTCTTCCTGTaGATCAGGAGTGTGGGTGATGCTGGGCCACAGCCCCGCCTCCCC +
Preference number: 5 (lower is better)
Translates to: LRFDHLLYVVQAFFL*IRSVGDAGPQPRLP
Trigger: GGGGAGGCGGGGCTGTGGCCCAGCATCACCCACACTCCTGATTCACAGGAAGAAGGCCTGAACGACATACAGGAGATGATCAAAACGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402415.8
CDS CCA 90 bp GACACCGAGTCGGGATCCAGTCCATCTCCTAGCCGAATGGCCAGATaGTCAAGGTCTTCCATCTCCAGCACCGCCGGTTCATCTGGTCTT +
Preference number: 5 (lower is better)
Translates to: DTESGSSPSPSRMAR*SRSSISSTAGSSGL
Trigger: AAGACCAGATGAACCGGCGGTGCTGGAGATGGAAGACCTTGACCATCTGGCCATTCGGCTAGGAGATGGACTGGATCCCGACTCGGTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS CCA 90 bp AGGCTAGAGACACCGAGTCGGGATCCAGTCCATCTCCTAGCCGAATaGCCAGATGGTCAAGGTCTTCCATCTCCAGCACCGCCGGTTCAT +
Preference number: 5 (lower is better)
Translates to: RLETPSRDPVHLLAE*PDGQGLPSPAPPVH
Trigger: ATGAACCGGCGGTGCTGGAGATGGAAGACCTTGACCATCTGGCCATTCGGCTAGGAGATGGACTGGATCCCGACTCGGTGTCTCTAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CAA 90 bp AGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTACGCACAGGCTGGTCTaGATGATAGCATTGTTGTCA +
Preference number: 5 (lower is better)
Translates to: SERSQVEPSSGRSSRAGTTHRLV*MIALLS
Trigger: TGACAACAATGCTATCATCAAGACCAGCCTGTGCGT...AGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CAA 90 bp GCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCAGGGGGTCCACGAGGTCCTaGTTTTCACCGATGAAAGCC +
Preference number: 5 (lower is better)
Translates to: APQGRWERVQATERKCGRGSTRS*FSPMKA
Trigger: GGCTTTCATCGGTGAAAACAAGGACCTCGTGGACCC...CCTGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CAA 90 bp AGGCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCACTGGTGAGCTCAGGGTaGGAGGTGTCTACGATCTCC +
Preference number: 5 (lower is better)
Translates to: RLPRGDGKESKPLKGNAALVSSG*EVSTIS
Trigger: GGAGATCGTAGACACCTCCAACCCTGAGCTCACCAG...TGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CAA 90 bp GCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCAGGTCAAAGGTGATGGGCTaGTCTCCGTTTCTCCGGTCG +
Preference number: 5 (lower is better)
Translates to: APQGRWERVQATERKCGRSKVMG*SPFLRS
Trigger: CGACCGGAGAAACGGAGACAAGCCCATCACCTTTGA...CCTGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CAA 90 bp ATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTGAGGTACAGCTCCACCTaGGCCTGCACTGTCCAGCCT +
Preference number: 5 (lower is better)
Translates to: ILYLEDLGRVSGVFLWSLRYSST*ACTVQP
Trigger: AGGCTGGACAGTGCAGGCCAAGGTGGAGCTGTACCT...CAGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp ATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTGAACTCCTTGCGCTGTTaGCTGAGGCCCAGCCACAGG +
Preference number: 5 (lower is better)
Translates to: ILYLEDLGRVSGVFLWSLNSLRC*LRPSHR
Trigger: CCTGTGGCTGGGCCTCAGCAAACAGCGCAAGGAGTT...CAGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTCACGGCGGTTAAGCTCATCAATCTaGGGTTTCTTCTTCTCGGGG +
Preference number: 5 (lower is better)
Translates to: VWPLLRIKDRCYLQGSRRLSSSI*GFFFSG
Trigger: CCCCGAGAAGAAGAAACCCAAGATTGATGAGCTTAA...CCGCCGTGACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCAGGACATTGATGGGGTCATaGCTCGGGATGCCCTGGAAC +
Preference number: 5 (lower is better)
Translates to: APQGRWERVQATERKCGRTLMGS*LGMPWN
Trigger: GTTCCAGGGCATCCCGAGCAATGACCCCATCAATGT...CCTGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GATACCTTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCCCCGGCTTGTCGGGGTaGAGCAGCGGCCTCGTCTCC +
Preference number: 5 (lower is better)
Translates to: DTFCSFILFKALGTDPWSPGLSG*SSGLVS
Trigger: GGAGACGAGGCCGCTGCTCAACCCCGACAAGCCGGG...GGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAAGGTATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp AGGAAGAGCCCCAACATGAGCAGCCCCAACAGCGCCAGCACGATCTTGATGATGCGCAGCTCGTACTTCTaGGGCTTCCGAGGTGAGATG +
Preference number: 5 (lower is better)
Translates to: RKSPNMSSPNSASTILMMRSSYF*GFRGEM
Trigger: CATCTCACCTCGGAAGCCCAAGAAGTACGAGCTGCG...CATCATCAAGATCGTGCTGGCGCTGTTGGGGCTGCTCATGTTGGGGCTCTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
CDS-3UTR CAA 90 bp GAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTTGTAACATGGACTCCTTCTaGGAGATGACGATCTTCTCC +
Preference number: 5 (lower is better)
Translates to: ERSQVEPSSGRSSRAGTCNMDSF*EMTIFS
Trigger: GGAGAAGATCGTCATCTCCAAGAAGGAGTCCATGTT...ACAAGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCAGGTTGACGCGCTTTTGCTaGAAGATGGACACGAGGGGC +
Preference number: 5 (lower is better)
Translates to: APQGRWERVQATERKCGRLTRFC*KMDTRG
Trigger: GCCCCTCGTGTCCATCTTCAAGCAAAAGCGCGTCAA...CCTGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCAGGAGGAGCAGCAACAGTTaGAGGAGCAGCCAGCGATAC +
Preference number: 5 (lower is better)
Translates to: APQGRWERVQATERKCGRRSSNS*RSSQRY
Trigger: GTATCGCTGGCTGCTCCTCAAACTGTTGCTGCTCCT...CCTGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
CDS-3UTR CAA 90 bp CCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCACTGACCCATGGTCCTaGGTTAATTTCACTAAAGCT +
Preference number: 5 (lower is better)
Translates to: PTGRTGDPLGSERSQVEPTDPWS*VNFTKA
Trigger: AGCTTTAGTGAAATTAACCAAGGACCATGGGTCAGT...GGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS TCA 90 bp TGTACTCGGTCTCGTCCCAGGAGAACATGGACTCCTTCTTGGAGATaGCGATCTTCTCCTCCGCCGCCAGGTAGTCGAAGGGGAACAGGT +
Preference number: 5 (lower is better)
Translates to: CTRSRPRRTWTPSWR*RSSPPPPGSRRGTG
Trigger: ACCTGTTCCCCTTCGACTACCTGGCGGCGGAGGAGAAGATCGTCATCTCCAAGAAGGAGTCCATGTTCTCCTGGGACGAGACCGAGTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS TCA 90 bp CCAGGACGCCCCGCAGGCGACGCTCAGGGTAGGACTTCTCCGTTTTaGTCATCTCCTGTATGTCGTTCAGGCCTTCTTCCTCATGATCTG +
Preference number: 5 (lower is better)
Translates to: PGRPAGDAQGRTSPF*SSPVCRSGLLPHDL
Trigger: CAGATCATGAGGAAGAAGGCCTGAACGACATACAGGAGATGATCAAAACGGAGAAGTCCTACCCTGAGCGTCGCCTGCGGGGCGTCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338581.10
ENST00000339598.8
CDS TCA 90 bp CCAGGACGCCCCGCAGGCGACGCTCAGGGTAGGACTTCTCCGTTTTaGTCATCTCCTGTATGTCGTTCAGGCCTTCTTCCTGTGAATCAG +
Preference number: 5 (lower is better)
Translates to: PGRPAGDAQGRTSPF*SSPVCRSGLLPVNQ
Trigger: CTGATTCACAGGAAGAAGGCCTGAACGACATACAGGAGATGATCAAAACGGAGAAGTCCTACCCTGAGCGTCGCCTGCGGGGCGTCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402415.8
CDS CCA 90 bp CGCGTCCAGCTTCACCATGGTCTCCAGTTTCTTGATGGGTACCTCTaGCTCCATAGTCACCACAACCTCCCCTGTGGAGTGAGAGGAGGA +
Preference number: 5 (lower is better)
Translates to: RVQLHHGLQFLDGYL*LHSHHNLPCGVRGG
Trigger: TCCTCCTCTCACTCCACAGGGGAGGTTGTGGTGACTATGGAGCCAGAGGTACCCATCAAGAAACTGGAGACCATGGTGAAGCTGGACGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000402415.8
ENST00000403946.7
CDS CCA 90 bp CCACCAGGTCCCAGTCATACACAGCCACCGTCAGCATGGATTCCATaGGGAAGGAGGCCTCGATGTCAAAGGACTTCCCAAAGACAGGGT +
Preference number: 5 (lower is better)
Translates to: PPGPSHTQPPSAWIP*GRRPRCQRTSQRQG
Trigger: ACCCTGTCTTTGGGAAGTCCTTTGACATCGAGGCCTCCTTCCCCATGGAATCCATGCTGACGGTGGCTGTGTATGACTGGGACCTGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
ENST00000464574.1
CDS-3UTR CAA 90 bp AGGCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCAGGGTCCACGAGGTCCTaGTTTTCACCGATGAAAGCC +
Preference number: 5 (lower is better)
Translates to: RLPRGDGKESKPLKGNAAGSTRS*FSPMKA
Trigger: GGCTTTCATCGGTGAAAACAAGGACCTCGTGGACCC...TGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CAA 90 bp ATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTGAAGAGCGTCTTGACCTaGGCGCAGTCCTTGCCAGTC +
Preference number: 5 (lower is better)
Translates to: ILYLEDLGRVSGVFLWSLKSVLT*AQSLPV
Trigger: GACTGGCAAGGACTGCGCCAAGGTCAAGACGCTCTT...CAGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp TGGAAACCCACAGGCAGGACAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGCACTTGACGAGGGTGTaGAAGTTGGGGTTCTTCTTA +
Preference number: 5 (lower is better)
Translates to: WKPTGRTGDPLGSERSQVHLTRV*KLGFFL
Trigger: TAAGAAGAACCCCAACTTCAACACCCTCGTCAAGTG...CACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTGTCCTGCCTGTGGGTTTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp AGGCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCAACATTGATGGGGTCATaGCTCGGGATGCCCTGGAAC +
Preference number: 5 (lower is better)
Translates to: RLPRGDGKESKPLKGNAATLMGS*LGMPWN
Trigger: GTTCCAGGGCATCCCGAGCAATGACCCCATCAATGT...TGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp AGGAAGAGCCCCAACATGAGCAGCCCCAACAGCGCCAGCACGATCTTGATGATGACATTGATGGGGTCATaGCTCGGGATGCCCTGGAAC +
Preference number: 5 (lower is better)
Translates to: RKSPNMSSPNSASTILMMTLMGS*LGMPWN
Trigger: GTTCCAGGGCATCCCGAGCAATGACCCCATCAATGT...CATCATCAAGATCGTGCTGGCGCTGTTGGGGCTGCTCATGTTGGGGCTCTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
CDS-3UTR CAA 90 bp AATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTTCGCGGATGTCAGTCTaGCCTAGCCGGATGGCGATG +
Preference number: 5 (lower is better)
Translates to: NPVLGRPGEGFRSLPLEPSRMSV*PSRMAM
Trigger: CATCGCCATCCGGCTAGGCAAGACTGACATCCGCGA...AGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp AGGAAGAGCCCCAACATGAGCAGCCCCAACAGCGCCAGCACGATCTTGATGATGTTGACGCGCTTTTGCTaGAAGATGGACACGAGGGGC +
Preference number: 5 (lower is better)
Translates to: RKSPNMSSPNSASTILMMLTRFC*KMDTRG
Trigger: GCCCCTCGTGTCCATCTTCAAGCAAAAGCGCGTCAA...CATCATCAAGATCGTGCTGGCGCTGTTGGGGCTGCTCATGTTGGGGCTCTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
CDS-3UTR CAA 90 bp ATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTGAGCTCAGCCTCCACCTaGCCCGTGAGCTCAAACTCA +
Preference number: 5 (lower is better)
Translates to: ILYLEDLGRVSGVFLWSLSSAST*PVSSNS
Trigger: TGAGTTTGAGCTCACGGGCAAGGTGGAGGCTGAGCT...CAGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GATACCTTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCAGGGGGTCAGGTTCATaGCGGGCCAGGCCCACTGGG +
Preference number: 5 (lower is better)
Translates to: DTFCSFILFKALGTDPWSRGSGS*RARPTG
Trigger: CCCAGTGGGCCTGGCCCGCAATGAACCTGACCCCCT...GGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAAGGTATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCAGGTTGATGATGAGCCACTaGTACCGGGTGCAGATGAGG +
Preference number: 5 (lower is better)
Translates to: APQGRWERVQATERKCGRLMMSH*YRVQMR
Trigger: CCTCATCTGCACCCGGTACAAGTGGCTCATCATCAA...CCTGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCAGGGCTTCAATCCTGTACTaGGAAGACCTGGGGAGGGTT +
Preference number: 5 (lower is better)
Translates to: APQGRWERVQATERKCGRASILY*EDLGRV
Trigger: AACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGC...CCTGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp TCGGCCCAAGGCATGAAGAGTGGACGCTGGGCTCCTCAGGCTCCCCAGGGGAGAACTGACCCATGGTCCTaGGTTAATTTCACTAAAGCT +
Preference number: 5 (lower is better)
Translates to: SAQGMKSGRWAPQAPQGRTDPWS*VNFTKA
Trigger: AGCTTTAGTGAAATTAACCAAGGACCATGGGTCAGT...TCTCCCCTGGGGAGCCTGAGGAGCCCAGCGTCCACTCTTCATGCCTTGGGCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS TCA 90 bp CCTCAATGTCATCTTCGTCGGTCTCATTGGCCTTGTGGGGCGTCTTaGTGTTGTCCCCTTTGCCCACCACGGCAACGTCACACTTCACGT +
Preference number: 5 (lower is better)
Translates to: PQCHLRRSHWPCGAS*CCPLCPPRQRHTSR
Trigger: ACGTGAAGTGTGACGTTGCCGTGGTGGGCAAAGGGGACAACATCAAGACGCCCCACAAGGCCAATGAGACCGACGAAGATGACATTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS TCA 90 bp CCTTCAGCCACCCCCTCACGAAGATGTCACTGGACTTCTCCCCTGTaGAGAAGTCGTCGTCCTCCAAGACCACCTCATCTGTGTTCCAGA +
Preference number: 5 (lower is better)
Translates to: PSATPSRRCHWTSPL*RSRRPPRPPHLCSR
Trigger: TCTGGAACACAGATGAGGTGGTCTTGGAGGACGACGACTTCTTCACAGGGGAGAAGTCCAGTGACATCTTCGTGAGGGGGTGGCTGAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS GCA 90 bp ATCAGCGTGTCAGTCACCTCCACATGGCTCTCCTCTACCACCTTCTaGAGCACCATGCGGAAGGTCCCGATGAGCTTGTTGCTGAAGACT +
Preference number: 5 (lower is better)
Translates to: ISVSVTSTWLSSTTF*STMRKVPMSLLLKT
Trigger: AGTCTTCAGCAACAAGCTCATCGGGACCTTCCGCATGGTGCTGCAGAAGGTGGTAGAGGAGAGCCATGTGGAGGTGACTGACACGCTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS CCA 90 bp AGCAAGTTCCCCTCAATGTCATCTTCGTCGGTCTCATTGGCCTTGTaGGGCGTCTTGATGTTGTCCCCTTTGCCCACCACGGCAACGTCA +
Preference number: 5 (lower is better)
Translates to: SKFPSMSSSSVSLAL*GVLMLSPLPTTATS
Trigger: TGACGTTGCCGTGGTGGGCAAAGGGGACAACATCAAGACGCCCCACAAGGCCAATGAGACCGACGAAGATGACATTGAGGGGAACTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS CCA 90 bp CAGCAGCGTGTAGTTACGTGTGGAGCCGTACATGTTCACCCAGGCTaGGCCCAGTGTGGGCAGGAAGCCTTTGTCTCCGTCATTAGAAAT +
Preference number: 5 (lower is better)
Translates to: QQRVVTCGAVHVHPG*AQCGQEAFVSVIRN
Trigger: ATTTCTAATGACGGAGACAAAGGCTTCCTGCCCACACTGGGCCCAGCCTGGGTGAACATGTACGGCTCCACACGTAACTACACGCTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CAA 90 bp GTCTGGCCCCTGCTGCGGATCAAAGACCGGTGCTATCTGCAGGGGTCACGGCGGTTGATGATAGCATTGTaGTCATCAATCAGCGTGTCA +
Preference number: 5 (lower is better)
Translates to: VWPLLRIKDRCYLQGSRRLMIAL*SSISVS
Trigger: TGACACGCTGATTGATGACAACAATGCTATCATCAA...CCGCCGTGACCCCTGCAGATAGCACCGGTCTTTGATCCGCAGCAGGGGCCAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CAA 90 bp GGGCAGCACTTGACGGGCCAGCTCCCAGCTGCAGCTGAAAGGGCTGGAAGGGCAGAAATCTTGATGATCTaGTCAAACATGACATCCGGA +
Preference number: 5 (lower is better)
Translates to: GQHLTGQLPAAAERAGRAEILMI*SNMTSG
Trigger: TCCGGATGTCATGTTTGACAAGATCATCAAGATTTC...TGCCCTTCCAGCCCTTTCAGCTGCAGCTGGGAGCTGGCCCGTCAAGTGCTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CAA 90 bp ATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTGTTGATGTTGTCCCCTTaGCCCACCACGGCAACGTCA +
Preference number: 5 (lower is better)
Translates to: ILYLEDLGRVSGVFLWSLLMLSP*PTTATS
Trigger: TGACGTTGCCGTGGTGGGCAAAGGGGACAACATCAA...CAGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CAA 90 bp ATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTGTCGGTCTCATTGGCCTaGTGGGGCGTCTTGATGTTG +
Preference number: 5 (lower is better)
Translates to: ILYLEDLGRVSGVFLWSLSVSLA*WGVLML
Trigger: CAACATCAAGACGCCCCACAAGGCCAATGAGACCGA...CAGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CAA 90 bp CAACATGAGCAGCCCCAACAGCGCCAGCACGATCTTGATGATGAGCCACTTGTATTCTCCGGTCGATCATaGAGGCCTCCAGGAAGGCTC +
Preference number: 5 (lower is better)
Translates to: QHEQPQQRQHDLDDEPLVFSGRS*RPPGRL
Trigger: GAGCCTTCCTGGAGGCCTCAATGATCGACCGGAGAA...TACAAGTGGCTCATCATCAAGATCGTGCTGGCGCTGTTGGGGCTGCTCATGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272371.7
CDS-3UTR CAA 90 bp AGGAAGAGCCCCAACATGAGCAGCCCCAACAGCGCCAGCACGATCTTGATGATGTTAAGGAAGAGCGTCTaGACCTTGGCGCAGTCCTTG +
Preference number: 5 (lower is better)
Translates to: RKSPNMSSPNSASTILMMLRKSV*TLAQSL
Trigger: CAAGGACTGCGCCAAGGTCAAGACGCTCTTCCTTAA...CATCATCAAGATCGTGCTGGCGCTGTTGGGGCTGCTCATGTTGGGGCTCTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
CDS-3UTR CAA 90 bp AGGCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCACCCATGAAGTCAGCTTaGCCCATGGAATCCTGGTCA +
Preference number: 5 (lower is better)
Translates to: RLPRGDGKESKPLKGNAAPMKSA*PMESWS
Trigger: TGACCAGGATTCCATGGGCAAAGCTGACTTCATGGG...TGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp AATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTGCCCTTGCCTTCTCCTaGCCCTTCATTGACCCCTTC +
Preference number: 5 (lower is better)
Translates to: NPVLGRPGEGFRSLPLEPALAFS*PFIDPF
Trigger: GAAGGGGTCAATGAAGGGCAAGGAGAAGGCAAGGGC...AGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp CAACATGAGCAGCCCCAACAGCGCCAGCACGATCTTGATGATGAGCCACTTGTAGCCCTTGCCTTCTCCTaGCCCTTCATTGACCCCTTC +
Preference number: 5 (lower is better)
Translates to: QHEQPQQRQHDLDDEPLVALAFS*PFIDPF
Trigger: GAAGGGGTCAATGAAGGGCAAGGAGAAGGCAAGGGC...TACAAGTGGCTCATCATCAAGATCGTGCTGGCGCTGTTGGGGCTGCTCATGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
CDS-3UTR CAA 90 bp CAACATGAGCAGCCCCAACAGCGCCAGCACGATCTTGATGATGAGCCACTTGTACCTCTTTGGCAGCCCTaGCCTTCTCCTTGCCCTTCA +
Preference number: 5 (lower is better)
Translates to: QHEQPQQRQHDLDDEPLVPLWQP*PSPCPS
Trigger: TGAAGGGCAAGGAGAAGGCAAGGGCTGCCAAAGAGG...TACAAGTGGCTCATCATCAAGATCGTGCTGGCGCTGTTGGGGCTGCTCATGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
CDS-3UTR CAA 90 bp AATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTTCCACTTTGCCGTCTTaGCAGAGGCGGGTCAGGATC +
Preference number: 5 (lower is better)
Translates to: NPVLGRPGEGFRSLPLEPSTLPS*QRRVRI
Trigger: GATCCTGACCCGCCTCTGCAAAGACGGCAAAGTGGA...AGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp AATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTCGCAGCTCGTACTTCTaGGGCTTCCGAGGTGAGATG +
Preference number: 5 (lower is better)
Translates to: NPVLGRPGEGFRSLPLEPRSSYF*GFRGEM
Trigger: CATCTCACCTCGGAAGCCCAAGAAGTACGAGCTGCG...AGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp AGGCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCAGCCTTTGACGCGCTTTaGCTTGAAGATGGACACGAG +
Preference number: 5 (lower is better)
Translates to: RLPRGDGKESKPLKGNAAAFDAL*LEDGHE
Trigger: CTCGTGTCCATCTTCAAGCAAAAGCGCGTCAAAGGC...TGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp ATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTGAGGAGCAGCAACAGTTaGAGGAGCAGCCAGCGATAC +
Preference number: 5 (lower is better)
Translates to: ILYLEDLGRVSGVFLWSLRSSNS*RSSQRY
Trigger: GTATCGCTGGCTGCTCCTCAAACTGTTGCTGCTCCT...CAGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
CDS-3UTR CAA 90 bp GCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCAGGGTGCAGATGAGGTACTaGATGGACTTGAGAGGGTTG +
Preference number: 5 (lower is better)
Translates to: APQGRWERVQATERKCGRVQMRY*MDLRGL
Trigger: CAACCCTCTCAAGTCCATCAAGTACCTCATCTGCAC...CCTGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp AGGCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCAAGCGCCAGCACGATCTaGATGATGAGCCACTTGTAC +
Preference number: 5 (lower is better)
Translates to: RLPRGDGKESKPLKGNAASASTI*MMSHLY
Trigger: GTACAAGTGGCTCATCATCAAGATCGTGCTGGCGCT...TGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp AGGCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCAGCTTCAATCCTGTACTaGGAAGACCTGGGGAGGGTT +
Preference number: 5 (lower is better)
Translates to: RLPRGDGKESKPLKGNAAASILY*EDLGRV
Trigger: AACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGC...TGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp AGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGCAGCCGCGCTGGGACTACTGACCCATGGTCCTaGGTTAATTTCACTAAAGCT +
Preference number: 5 (lower is better)
Translates to: SERSQVEPSSGRSSRAGTTDPWS*VNFTKA
Trigger: AGCTTTAGTGAAATTAACCAAGGACCATGGGTCAGT...AGTCCCAGCGCGGCTGCTTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS TCA 90 bp CGGTGGAGCCATCCTCATCATCCCCGGTCTTGCCCCGAAGCAAGTTaGAAGTGTGCAGCCAGTCCTCAAAGTTATCAAACTCGGACTCCA +
Preference number: 5 (lower is better)
Translates to: RWSHPHHPRSCPEAS*KCAASPQSYQTRTP
Trigger: TGGAGTCCGAGTTTGATAACTTTGAGGACTGGCTGCACACTTTCAACTTGCTTCGGGGCAAGACCGGGGATGATGAGGATGGCTCCACCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS TCA 90 bp CTCAGAACCTGGAGATGTTGGTGTTCATGGGGGTTCTTCAGTTCCTaGAGGAAGAAGCCACCTCTGGGCTGTGAGTCTGTGGCTCTGGTG +
Preference number: 5 (lower is better)
Translates to: LRTWRCWCSWGFFSS*RKKPPLGCESVALV
Trigger: CACCAGAGCCACAGACTCACAGCCCAGAGGTGGCTTCTTCCTTCAGGAACTGAAGAACCCCCATGAACACCAACATCTCCAGGTTCTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
CDS-3UTR CAA 90 bp CAGGCGACCCCCTGGGAAGTGAGAGGAGCCAAGTGGAGCCCAGCAGTGGCAGAAGAAATCTTGATGATCTaGTCAAACATGACATCCGGA +
Preference number: 5 (lower is better)
Translates to: QATPWEVRGAKWSPAVAEEILMI*SNMTSG
Trigger: TCCGGATGTCATGTTTGACAAGATCATCAAGATTTC...TTCTGCCACTGCTGGGCTCCACTTGGCTCCTCTCACTTCCCAGGGGGTCGCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CAA 90 bp AATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTAGGCCTTCTTCCAGCTaGTCGGCAATGTGGTCCATG +
Preference number: 5 (lower is better)
Translates to: NPVLGRPGEGFRSLPLEPRPSSS*SAMWSM
Trigger: CATGGACCACATTGCCGACAAGCTGGAAGAAGGCCT...AGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CAA 90 bp TCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTACCTTGGCGCAGTCCTaGCCAGTCTCCTCCTCCACG +
Preference number: 5 (lower is better)
Translates to: SLKLQSCTWKTWGGFQESTLAQS*PVSSST
Trigger: CGTGGAGGAGGAGACTGGCAAGGACTGCGCCAAGGT...AGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCAGGCACTTGACGAGGGTGTaGAAGTTGGGGTTCTTCTTA +
Preference number: 5 (lower is better)
Translates to: APQGRWERVQATERKCGRHLTRV*KLGFFL
Trigger: TAAGAAGAACCCCAACTTCAACACCCTCGTCAAGTG...CCTGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCAGGTCCACTTCAAACCACTaGACGAGGGTGTTGAAGTTG +
Preference number: 5 (lower is better)
Translates to: APQGRWERVQATERKCGRSTSNH*TRVLKL
Trigger: CAACTTCAACACCCTCGTCAAGTGGTTTGAAGTGGA...CCTGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp ATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTGATGGAGGCAAAGTACTaGGACCACCAGTCCAGCATG +
Preference number: 5 (lower is better)
Translates to: ILYLEDLGRVSGVFLWSLMEAKY*DHQSSM
Trigger: CATGCTGGACTGGTGGTCCAAGTACTTTGCCTCCAT...CAGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp AGGCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCATCCAGAGGGCTCTTGTaGTCGAAGTTGCTCCTTCAT +
Preference number: 5 (lower is better)
Translates to: RLPRGDGKESKPLKGNAASRGLL*SKLLLH
Trigger: ATGAAGGAGCAACTTCGACAACAAGAGCCCTCTGGA...TGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp ATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTGTCATCATCCCCGGTCTaGCCCCGAAGCAAGTTGAAA +
Preference number: 5 (lower is better)
Translates to: ILYLEDLGRVSGVFLWSLSSSPV*PRSKLK
Trigger: TTTCAACTTGCTTCGGGGCAAGACCGGGGATGATGA...CAGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp TTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCTTGGTTTGGGGGCCGTCCACTTaGCCGTCTTTGCAGAGGCGG +
Preference number: 5 (lower is better)
Translates to: FCSFILFKALGTDPWSLVWGPST*PSLQRR
Trigger: CCGCCTCTGCAAAGACGGCAAAGTGGACGGCCCCCA...AACCAAGGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp ATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTGGCCTTTGACGCGCTTTaGCTTGAAGATGGACACGAG +
Preference number: 5 (lower is better)
Translates to: ILYLEDLGRVSGVFLWSLAFDAL*LEDGHE
Trigger: CTCGTGTCCATCTTCAAGCAAAAGCGCGTCAAAGGC...CAGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp AGGAAGAGCCCCAACATGAGCAGCCCCAACAGCGCCAGCACGATCTTGATGATGGTGCAGATGAGGTACTaGATGGACTTGAGAGGGTTG +
Preference number: 5 (lower is better)
Translates to: RKSPNMSSPNSASTILMMVQMRY*MDLRGL
Trigger: CAACCCTCTCAAGTCCATCAAGTACCTCATCTGCAC...CATCATCAAGATCGTGCTGGCGCTGTTGGGGCTGCTCATGTTGGGGCTCTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
CDS TCA 90 bp GGAGTGAGGGACCTCATGATCTGGGAGCTCTCGCTAGGGCCATCCTaGGTATCGGTCATCATGAGGAAGTCATCAATTTCCCAGGTTCTG +
Preference number: 5 (lower is better)
Translates to: GVRDLMIWELSLGPS*VSVIMRKSSISQVL
Trigger: CAGAACCTGGGAAATTGATGACTTCCTCATGATGACCGATACTCAGGATGGCCCTAGCGAGAGCTCCCAGATCATGAGGTCCCTCACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402415.8
CDS CCA 90 bp ATGATAGCATTGTTGTCATCAATCAGCGTGTCAGTCACCTCCACATaGCTCTCCTCTACCACCTTCTGCAGCACCATGCGGAAGGTCCCG +
Preference number: 5 (lower is better)
Translates to: MIALLSSISVSVTST*LSSTTFCSTMRKVP
Trigger: CGGGACCTTCCGCATGGTGCTGCAGAAGGTGGTAGAGGAGAGCCATGTGGAGGTGACTGACACGCTGATTGATGACAACAATGCTATCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CAA 90 bp AGGCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCAGGCTTAGATCGCTTGTaGGAGACATTAGTGGTGAGA +
Preference number: 5 (lower is better)
Translates to: RLPRGDGKESKPLKGNAAGLDRL*ETLVVR
Trigger: TCTCACCACTAATGTCTCCAACAAGCGATCTAAGCC...TGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CAA 90 bp AATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTTTCTGCACTGAAGTCTaGCCCTTCTGGCCAGCAAAG +
Preference number: 5 (lower is better)
Translates to: NPVLGRPGEGFRSLPLEPFCTEV*PFWPAK
Trigger: CTTTGCTGGCCAGAAGGGCAAGACTTCAGTGCAGAA...AGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CAA 90 bp TTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCTTGGTTACCTTGGCGCAGTCCTaGCCAGTCTCCTCCTCCACG +
Preference number: 5 (lower is better)
Translates to: FCSFILFKALGTDPWSLVTLAQS*PVSSST
Trigger: CGTGGAGGAGGAGACTGGCAAGGACTGCGCCAAGGT...AACCAAGGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GATACCTTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCAGGTACAGCTCCACCTaGGCCTGCACTGTCCAGCCT +
Preference number: 5 (lower is better)
Translates to: DTFCSFILFKALGTDPWSRYSST*ACTVQP
Trigger: AGGCTGGACAGTGCAGGCCAAGGTGGAGCTGTACCT...GGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAAGGTATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp AATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTCCCATGAAGTCAGCTTaGCCCATGGAATCCTGGTCA +
Preference number: 5 (lower is better)
Translates to: NPVLGRPGEGFRSLPLEPPMKSA*PMESWS
Trigger: TGACCAGGATTCCATGGGCAAAGCTGACTTCATGGG...AGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp AGGCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCATCCACTTCAAACCACTaGACGAGGGTGTTGAAGTTG +
Preference number: 5 (lower is better)
Translates to: RLPRGDGKESKPLKGNAASTSNH*TRVLKL
Trigger: CAACTTCAACACCCTCGTCAAGTGGTTTGAAGTGGA...TGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGAGGAGGAGCCCCCATaGCACAGCACACGGCAGCGC +
Preference number: 5 (lower is better)
Translates to: VNFTKASILYLEDLGRVSEEEPP*HSTRQR
Trigger: GCGCTGCCGTGTGCTGTGCAATGGGGGCTCCTCCTC...TGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp ATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTGTCAGCCACATCCACCTaGACAACAGCTTCAGAAGTC +
Preference number: 5 (lower is better)
Translates to: ILYLEDLGRVSGVFLWSLSATST*TTASEV
Trigger: GACTTCTGAAGCTGTTGTCAAGGTGGATGTGGCTGA...CAGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp ATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTGTCGGACTCCAGCTCTTaGGGGTATACCTTAAGCTCA +
Preference number: 5 (lower is better)
Translates to: ILYLEDLGRVSGVFLWSLSDSSS*GYTLSS
Trigger: TGAGCTTAAGGTATACCCCAAAGAGCTGGAGTCCGA...CAGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GACCCATGGTCCTTGGTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACTGCTCGATGCCCGGCTaGTCGGGGTTGAGCAGCGGC +
Preference number: 5 (lower is better)
Translates to: DPWSLVNFTKASILYLEDCSMPG*SGLSSG
Trigger: GCCGCTGCTCAACCCCGACAAGCCGGGCATCGAGCA...GTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAACCAAGGACCATGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp CAACATGAGCAGCCCCAACAGCGCCAGCACGATCTTGATGATGAGCCACTTGTAGCCTTTGACGCGCTTTaGCTTGAAGATGGACACGAG +
Preference number: 5 (lower is better)
Translates to: QHEQPQQRQHDLDDEPLVAFDAL*LEDGHE
Trigger: CTCGTGTCCATCTTCAAGCAAAAGCGCGTCAAAGGC...TACAAGTGGCTCATCATCAAGATCGTGCTGGCGCTGTTGGGGCTGCTCATGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
CDS TCA 90 bp CAGGCCTTCTTCCTCATGATCTGGGAGCTCTCGCTAGGGCCATCCTaGGTATCGGTCATCATGAGGAAGTCATCAATTTCCCAGGTTCTG +
Preference number: 5 (lower is better)
Translates to: QAFFLMIWELSLGPS*VSVIMRKSSISQVL
Trigger: CAGAACCTGGGAAATTGATGACTTCCTCATGATGACCGATACTCAGGATGGCCCTAGCGAGAGCTCCCAGATCATGAGGAAGAAGGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338581.10
ENST00000339598.8
CDS GCA 90 bp CCATCCTCATCATCCCCGGTCTTGCCCCGAAGCAAGTTGAAAGTGTaGAGCCAGTCCTCAAAGTTATCAAACTCGGACTCCAGCTCTTTG +
Preference number: 5 (lower is better)
Translates to: PSSSSPVLPRSKLKV*SQSSKLSNSDSSSL
Trigger: CAAAGAGCTGGAGTCCGAGTTTGATAACTTTGAGGACTGGCTGCACACTTTCAACTTGCTTCGGGGCAAGACCGGGGATGATGAGGATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS CCA 90 bp GATCACCGTGATGCTGACCTGGTAATCCATGGGCCGCCCAGCACTTaGCTCCATCTTAATGTCTGGCTTAGATCGCTTGTTGGAGACATT +
Preference number: 5 (lower is better)
Translates to: DHRDADLVIHGPPST*LHLNVWLRSLVGDI
Trigger: AATGTCTCCAACAAGCGATCTAAGCCAGACATTAAGATGGAGCCAAGTGCTGGGCGGCCCATGGATTACCAGGTCAGCATCACGGTGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CAA 90 bp TTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCTTGGTTGCCTTGTGGGGCGTCTaGATGTTGTCCCCTTTGCCC +
Preference number: 5 (lower is better)
Translates to: FCSFILFKALGTDPWSLVALWGV*MLSPLP
Trigger: GGGCAAAGGGGACAACATCAAGACGCCCCACAAGGC...AACCAAGGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CAA 90 bp AATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGATCCCTCATGCAGGACTaGAGGCGCTCCCGGTCAAGC +
Preference number: 5 (lower is better)
Translates to: NFTKASILYLEDLGRVSGSLMQD*RRSRSS
Trigger: GCTTGACCGGGAGCGCCTCAAGTCCTGCATGAGGGA...TCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp AATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTGCGACACGCTTGTTGTaGCTCATCATCCAGATGAAG +
Preference number: 5 (lower is better)
Translates to: NPVLGRPGEGFRSLPLEPATRLL*LIIQMK
Trigger: CTTCATCTGGATGATGAGCAACAACAAGCGTGTCGC...AGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp ATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTGCACTTGACGAGGGTGTaGAAGTTGGGGTTCTTCTTA +
Preference number: 5 (lower is better)
Translates to: ILYLEDLGRVSGVFLWSLHLTRV*KLGFFL
Trigger: TAAGAAGAACCCCAACTTCAACACCCTCGTCAAGTG...CAGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp CTGTTTGGACACACAATCAAGCTCAGCCCCCGACAGTCACATGCCAAAGGAGGCCACTTGACGAGGGTGTaGAAGTTGGGGTTCTTCTTA +
Preference number: 5 (lower is better)
Translates to: LFGHTIKLSPRQSHAKGGHLTRV*KLGFFL
Trigger: TAAGAAGAACCCCAACTTCAACACCCTCGTCAAGTG...GCCTCCTTTGGCATGTGACTGTCGGGGGCTGAGCTTGATTGTGTGTCCAAACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426958.1
CDS-3UTR CAA 90 bp GGAGCTGTTTGGACACACAATCAAGCTCAGCCCCCGACAGTCACATGCCAAAGGTCCACTTCAAACCACTaGACGAGGGTGTTGAAGTTG +
Preference number: 5 (lower is better)
Translates to: GAVWTHNQAQPPTVTCQRSTSNH*TRVLKL
Trigger: CAACTTCAACACCCTCGTCAAGTGGTTTGAAGTGGA...CCTTTGGCATGTGACTGTCGGGGGCTGAGCTTGATTGTGTGTCCAAACAGCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426958.1
CDS-3UTR CAA 90 bp CAACATGAGCAGCCCCAACAGCGCCAGCACGATCTTGATGATGAGCCACTTGTATCCAGAGGGCTCTTGTaGTCGAAGTTGCTCCTTCAT +
Preference number: 5 (lower is better)
Translates to: QHEQPQQRQHDLDDEPLVSRGLL*SKLLLH
Trigger: ATGAAGGAGCAACTTCGACAACAAGAGCCCTCTGGA...TACAAGTGGCTCATCATCAAGATCGTGCTGGCGCTGTTGGGGCTGCTCATGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
CDS-3UTR CAA 90 bp AATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTTCCAGAGGGCTCTTGTaGTCGAAGTTGCTCCTTCAT +
Preference number: 5 (lower is better)
Translates to: NPVLGRPGEGFRSLPLEPSRGLL*SKLLLH
Trigger: ATGAAGGAGCAACTTCGACAACAAGAGCCCTCTGGA...AGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp ATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTGAATTCCAGAGGGCTCTaGTTGTCGAAGTTGCTCCTT +
Preference number: 5 (lower is better)
Translates to: ILYLEDLGRVSGVFLWSLNSRGL*LSKLLL
Trigger: AAGGAGCAACTTCGACAACAAGAGCCCTCTGGAATT...CAGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp TTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCTTGGTTGGGTCAGCTTTGCCGTaGATGTCAGCAGGGTGCAGG +
Preference number: 5 (lower is better)
Translates to: FCSFILFKALGTDPWSLVGSALP*MSAGCR
Trigger: CCTGCACCCTGCTGACATCAACGGCAAAGCTGACCC...AACCAAGGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GATACCTTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCTCCACTTTGCCGTCTTaGCAGAGGCGGGTCAGGATC +
Preference number: 5 (lower is better)
Translates to: DTFCSFILFKALGTDPWSSTLPS*QRRVRI
Trigger: GATCCTGACCCGCCTCTGCAAAGACGGCAAAGTGGA...GGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAAGGTATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GATACCTTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCCGCAGCTCGTACTTCTaGGGCTTCCGAGGTGAGATG +
Preference number: 5 (lower is better)
Translates to: DTFCSFILFKALGTDPWSRSSYF*GFRGEM
Trigger: CATCTCACCTCGGAAGCCCAAGAAGTACGAGCTGCG...GGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAAGGTATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAACTGCTTGGCTGTCTTaGCGCCCCGCGGGAACCGGT +
Preference number: 5 (lower is better)
Translates to: VNFTKASILYLEDLGRVSTAWLS*RPAGTG
Trigger: ACCGGTTCCCGCGGGGCGCAAAGACAGCCAAGCAGT...TGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp TTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCTTGGTTAACTCATCGTTCTCATaGCGGGCCAGGAGGGGCCAC +
Preference number: 5 (lower is better)
Translates to: FCSFILFKALGTDPWSLVNSSFS*RARRGH
Trigger: GTGGCCCCTCCTGGCCCGCAATGAGAACGATGAGTT...AACCAAGGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GATACCTTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCAGCTCAGCCTCCACCTaGCCCGTGAGCTCAAACTCA +
Preference number: 5 (lower is better)
Translates to: DTFCSFILFKALGTDPWSSSAST*PVSSNS
Trigger: TGAGTTTGAGCTCACGGGCAAGGTGGAGGCTGAGCT...GGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAAGGTATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp AATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTGTGCAGATGAGGTACTaGATGGACTTGAGAGGGTTG +
Preference number: 5 (lower is better)
Translates to: NPVLGRPGEGFRSLPLEPVQMRY*MDLRGL
Trigger: CAACCCTCTCAAGTCCATCAAGTACCTCATCTGCAC...AGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GGAGCTGTTTGGACACACAATCAAGCTCAGCCCCCGACAGTCACATGCCAAAGGTTAGGAGGGAGCTGTTaGGACACACAATCAAGCTCA +
Preference number: 5 (lower is better)
Translates to: GAVWTHNQAQPPTVTCQRLGGSC*DTQSSS
Trigger: TGAGCTTGATTGTGTGTCCAAACAGCTCCCTCCTAA...CCTTTGGCATGTGACTGTCGGGGGCTGAGCTTGATTGTGTGTCCAAACAGCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426958.1
CDS-3UTR CAA 90 bp AATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTTCTGGCTTAGATCGCTaGTTGGAGACATTAGTGGTG +
Preference number: 5 (lower is better)
Translates to: NPVLGRPGEGFRSLPLEPSGLDR*LETLVV
Trigger: CACCACTAATGTCTCCAACAAGCGATCTAAGCCAGA...AGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CAA 90 bp AATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGATGGGGCGTCTTGATGTaGTCCCCTTTGCCCACCACG +
Preference number: 5 (lower is better)
Translates to: NFTKASILYLEDLGRVSGWGVLM*SPLPTT
Trigger: CGTGGTGGGCAAAGGGGACAACATCAAGACGCCCCA...TCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CAA 90 bp CAACATGAGCAGCCCCAACAGCGCCAGCACGATCTTGATGATGAGCCACTTGTACCGTCATTAGAAATCTaGCGCAGGTCAATGAAGTGG +
Preference number: 5 (lower is better)
Translates to: QHEQPQQRQHDLDDEPLVPSLEI*RRSMKW
Trigger: CCACTTCATTGACCTGCGCAAGATTTCTAATGACGG...TACAAGTGGCTCATCATCAAGATCGTGCTGGCGCTGTTGGGGCTGCTCATGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272371.7
CDS-3UTR CAA 90 bp TCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCAAAGGTGATGGGCTaGTCTCCGTTTCTCCGGTCG +
Preference number: 5 (lower is better)
Translates to: SLKLQSCTWKTWGGFQESSKVMG*SPFLRS
Trigger: CGACCGGAGAAACGGAGACAAGCCCATCACCTTTGA...AGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CAA 90 bp GACCCATGGTCCTTGGTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACGAGTGGCCCTGGTCCTaGTCAGCGAGGGAGAGGAAG +
Preference number: 5 (lower is better)
Translates to: DPWSLVNFTKASILYLEDEWPWS*SARERK
Trigger: CTTCCTCTCCCTCGCTGACAAGGACCAGGGCCACTC...GTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAACCAAGGACCATGGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGAGTGGCCCTGGTCCTaGTCAGCGAGGGAGAGGAAG +
Preference number: 5 (lower is better)
Translates to: VNFTKASILYLEDLGRVSEWPWS*SARERK
Trigger: CTTCCTCTCCCTCGCTGACAAGGACCAGGGCCACTC...TGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp AATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAAGGTACAGCTCCACCTaGGCCTGCACTGTCCAGCCT +
Preference number: 5 (lower is better)
Translates to: NFTKASILYLEDLGRVSGRYSST*ACTVQP
Trigger: AGGCTGGACAGTGCAGGCCAAGGTGGAGCTGTACCT...TCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp AATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAAACTCCTTGCGCTGTTaGCTGAGGCCCAGCCACAGG +
Preference number: 5 (lower is better)
Translates to: NFTKASILYLEDLGRVSGNSLRC*LRPSHR
Trigger: CCTGTGGCTGGGCCTCAGCAAACAGCGCAAGGAGTT...TCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GACCCATGGTCCTTGGTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCCGCACAGGAACTCCTaGCGCTGTTTGCTGAGGCCC +
Preference number: 5 (lower is better)
Translates to: DPWSLVNFTKASILYLEDPHRNS*RCLLRP
Trigger: GGGCCTCAGCAAACAGCGCAAGGAGTTCCTGTGCGG...GTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAACCAAGGACCATGGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCACCGCACAGGAACTCCTaGCGCTGTTTGCTGAGGCCC +
Preference number: 5 (lower is better)
Translates to: VNFTKASILYLEDLGRVSPHRNS*RCLLRP
Trigger: GGGCCTCAGCAAACAGCGCAAGGAGTTCCTGTGCGG...TGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp ATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTGTTAAGCTCATCAATCTaGGGTTTCTTCTTCTCGGGG +
Preference number: 5 (lower is better)
Translates to: ILYLEDLGRVSGVFLWSLLSSSI*GFFFSG
Trigger: CCCCGAGAAGAAGAAACCCAAGATTGATGAGCTTAA...CAGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GACCCATGGTCCTTGGTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACACGCAGAGGGAGCCCTaGAAGCGTCCCACAATGCGC +
Preference number: 5 (lower is better)
Translates to: DPWSLVNFTKASILYLEDTQREP*KRPTMR
Trigger: GCGCATTGTGGGACGCTTCAAGGGCTCCCTCTGCGT...GTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAACCAAGGACCATGGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp AGGCTCCCCAGGGGAGATGGGAAAGAGTCCAAGCCACTGAAAGGAAATGCGGCATTGATGATAGCATTGTaGTCATCAATCAGCGTGTCA +
Preference number: 5 (lower is better)
Translates to: RLPRGDGKESKPLKGNAALMIAL*SSISVS
Trigger: TGACACGCTGATTGATGACAACAATGCTATCATCAA...TGCCGCATTTCCTTTCAGTGGCTTGGACTCTTTCCCATCTCCCCTGGGGAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CAA 90 bp GACCCATGGTCCTTGGTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACTGGGGCGTCTTGATGTaGTCCCCTTTGCCCACCACG +
Preference number: 5 (lower is better)
Translates to: DPWSLVNFTKASILYLEDWGVLM*SPLPTT
Trigger: CGTGGTGGGCAAAGGGGACAACATCAAGACGCCCCA...GTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAACCAAGGACCATGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CAA 90 bp GTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAAGGTACAGCTCCACCTaGGCCTGCACTGTCCAGCCT +
Preference number: 5 (lower is better)
Translates to: VNFTKASILYLEDLGRVSRYSST*ACTVQP
Trigger: AGGCTGGACAGTGCAGGCCAAGGTGGAGCTGTACCT...TGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp TCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTCCCATGAAGTCAGCTTaGCCCATGGAATCCTGGTCA +
Preference number: 5 (lower is better)
Translates to: SLKLQSCTWKTWGGFQESPMKSA*PMESWS
Trigger: TGACCAGGATTCCATGGGCAAAGCTGACTTCATGGG...AGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp TCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTATGGAGGCAAAGTACTaGGACCACCAGTCCAGCATG +
Preference number: 5 (lower is better)
Translates to: SLKLQSCTWKTWGGFQESMEAKY*DHQSSM
Trigger: CATGCTGGACTGGTGGTCCAAGTACTTTGCCTCCAT...AGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp CAACATGAGCAGCCCCAACAGCGCCAGCACGATCTTGATGATGAGCCACTTGTATTAAGCTCATCAATCTaGGGTTTCTTCTTCTCGGGG +
Preference number: 5 (lower is better)
Translates to: QHEQPQQRQHDLDDEPLVLSSSI*GFFFSG
Trigger: CCCCGAGAAGAAGAAACCCAAGATTGATGAGCTTAA...TACAAGTGGCTCATCATCAAGATCGTGCTGGCGCTGTTGGGGCTGCTCATGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
CDS-3UTR CAA 90 bp AATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTTTAAGCTCATCAATCTaGGGTTTCTTCTTCTCGGGG +
Preference number: 5 (lower is better)
Translates to: NPVLGRPGEGFRSLPLEPLSSSI*GFFFSG
Trigger: CCCCGAGAAGAAGAAACCCAAGATTGATGAGCTTAA...AGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCATCTGGGAGTGGCACTTaGTACACGCAGAGGGAGCCC +
Preference number: 5 (lower is better)
Translates to: VNFTKASILYLEDLGRVSSGSGT*YTQREP
Trigger: GGGCTCCCTCTGCGTGTACAAAGTGCCACTCCCAGA...TGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGGTCAGCTTTGCCGTaGATGTCAGCAGGGTGCAGG +
Preference number: 5 (lower is better)
Translates to: VNFTKASILYLEDLGRVSGSALP*MSAGCR
Trigger: CCTGCACCCTGCTGACATCAACGGCAAAGCTGACCC...TGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GACCCATGGTCCTTGGTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACTCGCGGATGTCAGTCTaGCCTAGCCGGATGGCGATG +
Preference number: 5 (lower is better)
Translates to: DPWSLVNFTKASILYLEDSRMSV*PSRMAM
Trigger: CATCGCCATCCGGCTAGGCAAGACTGACATCCGCGA...GTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAACCAAGGACCATGGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp AATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGATCCACTTTGCCGTCTTaGCAGAGGCGGGTCAGGATC +
Preference number: 5 (lower is better)
Translates to: NFTKASILYLEDLGRVSGSTLPS*QRRVRI
Trigger: GATCCTGACCCGCCTCTGCAAAGACGGCAAAGTGGA...TCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCACCAGTGAAGACGCGGTaGGCCACCTTCACTCTCCCA +
Preference number: 5 (lower is better)
Translates to: VNFTKASILYLEDLGRVSPVKTR*ATFTLP
Trigger: TGGGAGAGTGAAGGTGGCCAACCGCGTCTTCACTGG...TGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp TCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTTGATGATGAGCCACTaGTACCGGGTGCAGATGAGG +
Preference number: 5 (lower is better)
Translates to: SLKLQSCTWKTWGGFQESLMMSH*YRVQMR
Trigger: CCTCATCTGCACCCGGTACAAGTGGCTCATCATCAA...AGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GATACCTTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCGCTTCAATCCTGTACTaGGAAGACCTGGGGAGGGTT +
Preference number: 5 (lower is better)
Translates to: DTFCSFILFKALGTDPWSASILY*EDLGRV
Trigger: AACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGC...GGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAAGGTATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp ATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTGACTGACCCATGGTCCTaGGTTAATTTCACTAAAGCT +
Preference number: 5 (lower is better)
Translates to: ILYLEDLGRVSGVFLWSLTDPWS*VNFTKA
Trigger: AGCTTTAGTGAAATTAACCAAGGACCATGGGTCAGT...CAGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GATACCTTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCCCGAGAGTAGAAGGATaGCCCTCGGAAAGTCACTTT +
Preference number: 5 (lower is better)
Translates to: DTFCSFILFKALGTDPWSPRVEG*PSESHF
Trigger: AAAGTGACTTTCCGAGGGCAATCCTTCTACTCTCGG...GGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAAGGTATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CAA 90 bp AATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTTCCTCTGGAGCCTGTCTTGATGATAGCATaGTTGTCATCAATCAGCGTG +
Preference number: 5 (lower is better)
Translates to: NPVLGRPGEGFRSLPLEPVLMIA*LSSISV
Trigger: CACGCTGATTGATGACAACAATGCTATCATCAAGAC...AGGCTCCAGAGGAAGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CAA 90 bp GTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGTTCCCACGTCCATTTaGAAGGAGCCCACCAGGGTG +
Preference number: 5 (lower is better)
Translates to: VNFTKASILYLEDLGRVSVPTSI*KEPTRV
Trigger: CACCCTGGTGGGCTCCTTCAAAATGGACGTGGGAAC...TGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CAA 90 bp AATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGATTCAGGCCCTCGGTATaGTCCACTTCCTCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: NFTKASILYLEDLGRVSGFRPSV*STSSFS
Trigger: GGAGAAGGAGGAAGTGGACAATACCGAGGGCCTGAA...TCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGCCCTTGCCTTCTCCTaGCCCTTCATTGACCCCTTC +
Preference number: 5 (lower is better)
Translates to: VNFTKASILYLEDLGRVSALAFS*PFIDPF
Trigger: GAAGGGGTCAATGAAGGGCAAGGAGAAGGCAAGGGC...TGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp TCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTGTGCAGATGAGGTACTaGATGGACTTGAGAGGGTTG +
Preference number: 5 (lower is better)
Translates to: SLKLQSCTWKTWGGFQESVQMRY*MDLRGL
Trigger: CAACCCTCTCAAGTCCATCAAGTACCTCATCTGCAC...AGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GATACCTTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCTCTGGCTTAGATCGCTaGTTGGAGACATTAGTGGTG +
Preference number: 5 (lower is better)
Translates to: DTFCSFILFKALGTDPWSSGLDR*LETLVV
Trigger: CACCACTAATGTCTCCAACAAGCGATCTAAGCCAGA...GGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAAGGTATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CAA 90 bp AATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGATTAAGGAAGAGCGTCTaGACCTTGGCGCAGTCCTTG +
Preference number: 5 (lower is better)
Translates to: NFTKASILYLEDLGRVSGLRKSV*TLAQSL
Trigger: CAAGGACTGCGCCAAGGTCAAGACGCTCTTCCTTAA...TCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp AATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGACCCATGAAGTCAGCTTaGCCCATGGAATCCTGGTCA +
Preference number: 5 (lower is better)
Translates to: NFTKASILYLEDLGRVSGPMKSA*PMESWS
Trigger: TGACCAGGATTCCATGGGCAAAGCTGACTTCATGGG...TCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp TTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCTTGGTTTCAGCCACATCCACCTaGACAACAGCTTCAGAAGTC +
Preference number: 5 (lower is better)
Translates to: FCSFILFKALGTDPWSLVSATST*TTASEV
Trigger: GACTTCTGAAGCTGTTGTCAAGGTGGATGTGGCTGA...AACCAAGGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp AATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAATGGAGGCAAAGTACTaGGACCACCAGTCCAGCATG +
Preference number: 5 (lower is better)
Translates to: NFTKASILYLEDLGRVSGMEAKY*DHQSSM
Trigger: CATGCTGGACTGGTGGTCCAAGTACTTTGCCTCCAT...TCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp TCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTAATTCCAGAGGGCTCTaGTTGTCGAAGTTGCTCCTT +
Preference number: 5 (lower is better)
Translates to: SLKLQSCTWKTWGGFQESNSRGL*LSKLLL
Trigger: AAGGAGCAACTTCGACAACAAGAGCCCTCTGGAATT...AGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GACCCATGGTCCTTGGTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACTTCAGGCCCTCGGTATaGTCCACTTCCTCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: DPWSLVNFTKASILYLEDFRPSV*STSSFS
Trigger: GGAGAAGGAGGAAGTGGACAATACCGAGGGCCTGAA...GTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAACCAAGGACCATGGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp TCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAGTCTAACATGGACTCCTTCTaGGAGATGACGATCTTCTCC +
Preference number: 5 (lower is better)
Translates to: SLKLQSCTWKTWGGFQESNMDSF*EMTIFS
Trigger: GGAGAAGATCGTCATCTCCAAGAAGGAGTCCATGTT...AGACTCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GACCCATGGTCCTTGGTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACTTGACGCGCTTTTGCTaGAAGATGGACACGAGGGGC +
Preference number: 5 (lower is better)
Translates to: DPWSLVNFTKASILYLEDLTRFC*KMDTRG
Trigger: GCCCCTCGTGTCCATCTTCAAGCAAAAGCGCGTCAA...GTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAACCAAGGACCATGGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp TTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCTTGGTTGTGCAGATGAGGTACTaGATGGACTTGAGAGGGTTG +
Preference number: 5 (lower is better)
Translates to: FCSFILFKALGTDPWSLVVQMRY*MDLRGL
Trigger: CAACCCTCTCAAGTCCATCAAGTACCTCATCTGCAC...AACCAAGGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp TTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCTTGGTTTCCACTTCAAACCACTaGACGAGGGTGTTGAAGTTG +
Preference number: 5 (lower is better)
Translates to: FCSFILFKALGTDPWSLVSTSNH*TRVLKL
Trigger: CAACTTCAACACCCTCGTCAAGTGGTTTGAAGTGGA...AACCAAGGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp AATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGATCAGCCACATCCACCTaGACAACAGCTTCAGAAGTC +
Preference number: 5 (lower is better)
Translates to: NFTKASILYLEDLGRVSGSATST*TTASEV
Trigger: GACTTCTGAAGCTGTTGTCAAGGTGGATGTGGCTGA...TCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAATGGAGGCAAAGTACTaGGACCACCAGTCCAGCATG +
Preference number: 5 (lower is better)
Translates to: VNFTKASILYLEDLGRVSMEAKY*DHQSSM
Trigger: CATGCTGGACTGGTGGTCCAAGTACTTTGCCTCCAT...TGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp TTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCTTGGTTAATTCCAGAGGGCTCTaGTTGTCGAAGTTGCTCCTT +
Preference number: 5 (lower is better)
Translates to: FCSFILFKALGTDPWSLVNSRGL*LSKLLL
Trigger: AAGGAGCAACTTCGACAACAAGAGCCCTCTGGAATT...AACCAAGGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp AATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGACACTTGACGAGGGTGTaGAAGTTGGGGTTCTTCTTA +
Preference number: 5 (lower is better)
Translates to: NFTKASILYLEDLGRVSGHLTRV*KLGFFL
Trigger: TAAGAAGAACCCCAACTTCAACACCCTCGTCAAGTG...TCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp AATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAAACATGGACTCCTTCTaGGAGATGACGATCTTCTCC +
Preference number: 5 (lower is better)
Translates to: NFTKASILYLEDLGRVSGNMDSF*EMTIFS
Trigger: GGAGAAGATCGTCATCTCCAAGAAGGAGTCCATGTT...TCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GATACCTTTTGCTCGTTCATTCTTTTTAAAGCCCTGGGCACTGACCCATGGTCCACTGACCCATGGTCCTaGGTTAATTTCACTAAAGCT +
Preference number: 5 (lower is better)
Translates to: DTFCSFILFKALGTDPWSTDPWS*VNFTKA
Trigger: AGCTTTAGTGAAATTAACCAAGGACCATGGGTCAGT...GGACCATGGGTCAGTGCCCAGGGCTTTAAAAAGAATGAACGAGCAAAAGGTATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp AATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCAGGAAAAGCCTTCTTTACATaGGCCATGAGGCTTGTGTTC +
Preference number: 5 (lower is better)
Translates to: NFTKASILYLEDLGRVSGKAFFT*AMRLVF
Trigger: GAACACAAGCCTCATGGCCAATGTAAAGAAGGCTTT...TCCTGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS-3UTR CAA 90 bp GTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACCTGGGGAGGGTTTCATTAAGCTCATCAATCTaGGGTTTCTTCTTCTCGGGG +
Preference number: 5 (lower is better)
Translates to: VNFTKASILYLEDLGRVSLSSSI*GFFFSG
Trigger: CCCCGAGAAGAAGAAACCCAAGATTGATGAGCTTAA...TGAAACCCTCCCCAGGTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS-3UTR CAA 90 bp GACCCATGGTCCTTGGTTAATTTCACTAAAGCTTCAATCCTGTACTTGGAAGACGTCTTGATGATAGCATaGTTGTCATCAATCAGCGTG +
Preference number: 5 (lower is better)
Translates to: DPWSLVNFTKASILYLEDVLMIA*LSSISV
Trigger: CACGCTGATTGATGACAACAATGCTATCATCAAGAC...GTCTTCCAAGTACAGGATTGAAGCTTTAGTGAAATTAACCAAGGACCATGGGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS GCA 72 bp GGCTTGTCGGGGTTGAGCAGCGGCCTCGTCTCCACATaGTCTGGCACCAGGCGGCAGCCTGCGCGGGGGATG +
Preference number: 6 (lower is better)
Translates to: GLSGLSSGLVST*SGTRRQPARGM
Trigger: CATCCCCCGCGCAGGCTGCCGCCTGGTGCCAGAGCATGTGGAGACGAGGCCGCTGCTCAACCCCGACAAGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
ENST00000464574.1
CDS CCA 72 bp GTCGGGGTTGAGCAGCGGCCTCGTCTCCACATGCTCTaGCACCAGGCGGCAGCCTGCGCGGGGGATGTCCTC +
Preference number: 6 (lower is better)
Translates to: VGVEQRPRLHML*HQAAACAGDVL
Trigger: GAGGACATCCCCCGCGCAGGCTGCCGCCTGGTGCCAGAGCATGTGGAGACGAGGCCGCTGCTCAACCCCGAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
ENST00000464574.1
CDS TCA 72 bp CCAGGCGGCCCTGCTCGATGCCCGGCTTGTCGGGGTTaGGCAGCGGCCTCGTCTCCACATGCTCTGGCACCA +
Preference number: 6 (lower is better)
Translates to: PGGPARCPACRG*AAASSPHALAP
Trigger: TGGTGCCAGAGCATGTGGAGACGAGGCCGCTGCTCAACCCCGACAAGCCGGGCATCGAGCAGGGCCGCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
ENST00000464574.1
CDS GCA 72 bp ACCAGGCGGCAGCCTGCGCGGGGGATGTCCTCCCAGTaGCTCAGGGCCAACAGCGCCACATGCTCGTCTGTG +
Preference number: 6 (lower is better)
Translates to: TRRQPARGMSSQ*LRANSATCSSV
Trigger: CACAGACGAGCATGTGGCGCTGTTGGCCCTGAGGCACTGGGAGGACATCCCCCGCGCAGGCTGCCGCCTGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
ENST00000464574.1
CDS GCA 72 bp CCTCGTCTCCACATGCTCTGGCACCAGGCGGCAGCCTaGGCGGGGGATGTCCTCCCAGTGCCTCAGGGCCAA +
Preference number: 6 (lower is better)
Translates to: PRLHMLWHQAAA*AGDVLPVPQGQ
Trigger: TTGGCCCTGAGGCACTGGGAGGACATCCCCCGCGCAGGCTGCCGCCTGGTGCCAGAGCATGTGGAGACGAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
ENST00000464574.1
CDS CAA 72 bp TCCAGGCGGCCCTGCTCGATGCCCGGCTTGTCGGGGTaGAGCAGCGGCCTCGTCTCCACATGCTCTGGCACC +
Preference number: 6 (lower is better)
Translates to: SRRPCSMPGLSG*SSGLVSTCSGT
Trigger: GGTGCCAGAGCATGTGGAGACGAGGCCGCTGCTCAACCCCGACAAGCCGGGCATCGAGCAGGGCCGCCTGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
ENST00000464574.1
CDS CAA 90 bp AGGCGCTCCCGGTCAAGCCTGGTGCGGGATGAGTGGCCCTGGTCCTaGTCAGCGAGGGAGAGGAAGCGGCAGCAGCCACAGCTCAGCTCC +
Preference number: 6 (lower is better)
Translates to: RRSRSSLVRDEWPWS*SARERKRQQPQLSS
Trigger: GGAGCTGAGCTGTGGCTGCTGCCGCTTCCTCTCCCTCGCTGACAAGGACCAGGGCCACTCATCCCGCACCAGGCTTGACCGGGAGCGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS TCA 72 bp GGTGACCTGGGGCCGCATTGGTGGAGTGGAGGAGACTaGGGCCAGGTCCCCGGCATCACCGGCCTCGTCATC +
Preference number: 6 (lower is better)
Translates to: GDLGPHWWSGGD*GQVPGITGLVI
Trigger: GATGACGAGGCCGGTGATGCCGGGGACCTGGCCTCAGTCTCCTCCACTCCACCAATGCGGCCCCAGGTCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS CCA 72 bp CCTGCACACTCGATGTCCACCCGTGGCCGGTCCACCTaGGCCAGGTTCACCCGCTTTAGGTCCCGTAGGCCC +
Preference number: 6 (lower is better)
Translates to: PAHSMSTRGRST*ARFTRFRSRRP
Trigger: GGGCCTACGGGACCTAAAGCGGGTGAACCTGGCCCAGGTGGACCGGCCACGGGTGGACATCGAGTGTGCAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS GCA 72 bp CTGAGGTGGGAAGCGGGGTGGGCAGTACGCCTCGTCTaGCATCTTCACCAGGGGTTTGGCGAAGGTCCGGCC +
Preference number: 6 (lower is better)
Translates to: LRWEAGWAVRLV*HLHQGFGEGPA
Trigger: GGCCGGACCTTCGCCAAACCCCTGGTGAAGATGGCAGACGAGGCGTACTGCCCACCCCGCTTCCCACCTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS GCA 72 bp CTCTCCCAGGGGGCCCAAAGTGGGGGCCGTCCACTTTaGCGTCTTTGCAGAGGCGGGTCAGGATCTGGCTGG +
Preference number: 6 (lower is better)
Translates to: LSQGAQSGGRPL*RLCRGGSGSGW
Trigger: CCAGCCAGATCCTGACCCGCCTCTGCAAAGACGGCAAAGTGGACGGCCCCCACTTTGGGCCCCCTGGGAGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
ENST00000464574.1
CDS GCA 72 bp ACGTCCACCTCCCCGGTGGCCATCTCCATGGTGCACTaGTTGGCTGTCTTTGCGCCCCGCGGGAACCGGTTC +
Preference number: 6 (lower is better)
Translates to: TSTSPVAISMVH*LAVFAPRGNRF
Trigger: GAACCGGTTCCCGCGGGGCGCAAAGACAGCCAAGCAGTGCACCATGGAGATGGCCACCGGGGAGGTGGACGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS CCA 72 bp ACTGCCAGGCAGGAGCAGCGGGAAGGAGCTAGCCGGTaGAGCACGGCTCACACGCCTCTCTCTTCTCTGCCG +
Preference number: 6 (lower is better)
Translates to: TARQEQREGASR*STAHTPLSSLP
Trigger: CGGCAGAGAAGAGAGAGGCGTGTGAGCCGTGCTCCACCGGCTAGCTCCTTCCCGCTGCTCCTGCCTGGCAGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS CCA 72 bp TCGCCCCTGCCCCGCAGCTCCGAGACTGTCTTGAGGTaGATGAGCAAGGCCATGCTGGTGTGGGCTGCCTGG +
Preference number: 6 (lower is better)
Translates to: SPLPRSSETVLR*MSKAMLVWAAW
Trigger: CCAGGCAGCCCACACCAGCATGGCCTTGCTCATCCACCTCAAGACAGTCTCGGAGCTGCGGGGCAGGGGCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS CCA 72 bp TTGAGGCGCTCCCGGTCAAGCCTGGTGCGGGATGAGTaGCCCTGGTCCTTGTCAGCGAGGGAGAGGAAGCGG +
Preference number: 6 (lower is better)
Translates to: LRRSRSSLVRDE*PWSLSARERKR
Trigger: CCGCTTCCTCTCCCTCGCTGACAAGGACCAGGGCCACTCATCCCGCACCAGGCTTGACCGGGAGCGCCTCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS CCA 72 bp GCACCGTGTGCCGCTTCACCTGGGCCCGCAGCATCCTaGCCTGCTGCCCCATGTTTTCCAGCTCCCTCATGC +
Preference number: 6 (lower is better)
Translates to: APCAASPGPAAS*PAAPCFPAPSC
Trigger: GCATGAGGGAGCTGGAAAACATGGGGCAGCAGGCCAGGATGCTGCGGGCCCAGGTGAAGCGGCACACGGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS CCA 72 bp AGTCCGCTGCTGTCGGCGGCAAAGAGGCTGCGGGCCTaGTACATGTGCGCTCGGAGCTGGAACGCCTGCTTC +
Preference number: 6 (lower is better)
Translates to: SPLLSAAKRLRA*YMCARSWNACF
Trigger: GAAGCAGGCGTTCCAGCTCCGAGCGCACATGTACCAGGCCCGCAGCCTCTTTGCCGCCGACAGCAGCGGACT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS CCA 72 bp AGCTCGATGGCCCCCAGGAAGTCGTCAGCGGAGAAGTaGTCCGCATCCCAGATCTGCAGGGTGAGCCGCGCG +
Preference number: 6 (lower is better)
Translates to: SSMAPRKSSAEK*SASQICRVSRA
Trigger: CGCGCGGCTCACCCTGCAGATCTGGGATGCGGACCACTTCTCCGCTGACGACTTCCTGGGGGCCATCGAGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS CCA 72 bp CCACCTCCCCGGTGGCCATCTCCATGGTGCACTGCTTaGCTGTCTTTGCGCCCCGCGGGAACCGGTTCAGGT +
Preference number: 6 (lower is better)
Translates to: PPPRWPSPWCTA*LSLRPAGTGSG
Trigger: ACCTGAACCGGTTCCCGCGGGGCGCAAAGACAGCCAAGCAGTGCACCATGGAGATGGCCACCGGGGAGGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS CAA 72 bp CGGTCAAGCCTGGTGCGGGATGAGTGGCCCTGGTCCTaGTCAGCGAGGGAGAGGAAGCGGCAGCAGCCACAG +
Preference number: 6 (lower is better)
Translates to: RSSLVRDEWPWS*SARERKRQQPQ
Trigger: CTGTGGCTGCTGCCGCTTCCTCTCCCTCGCTGACAAGGACCAGGGCCACTCATCCCGCACCAGGCTTGACCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS CAA 72 bp CGCAGCTTCTGCAGGAAGTTCTGGCACAGCCTCAGCTaGTCCCGCACCGTGTGCCGCTTCACCTGGGCCCGC +
Preference number: 6 (lower is better)
Translates to: RSFCRKFWHSLS*SRTVCRFTWAR
Trigger: GCGGGCCCAGGTGAAGCGGCACACGGTGCGGGACAAGCTGAGGCTGTGCCAGAACTTCCTGCAGAAGCTGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS CAA 90 bp ACTTTGGCGATCCGGTCGCCCCTGCCCCGCAGCTCCGAGACTGTCTaGAGGTGGATGAGCAAGGCCATGCTGGTGTGGGCTGCCTGGCAC +
Preference number: 6 (lower is better)
Translates to: TLAIRSPLPRSSETV*RWMSKAMLVWAAWH
Trigger: GTGCCAGGCAGCCCACACCAGCATGGCCTTGCTCATCCACCTCAAGACAGTCTCGGAGCTGCGGGGCAGGGGCGACCGGATCGCCAAAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS CAA 90 bp GCCAGGAAGCGCAGCTTCTGCAGGAAGTTCTGGCACAGCCTCAGCTaGTCCCGCACCGTGTGCCGCTTCACCTGGGCCCGCAGCATCCTG +
Preference number: 6 (lower is better)
Translates to: ARKRSFCRKFWHSLS*SRTVCRFTWARSIL
Trigger: CAGGATGCTGCGGGCCCAGGTGAAGCGGCACACGGTGCGGGACAAGCTGAGGCTGTGCCAGAACTTCCTGCAGAAGCTGCGCTTCCTGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS TCA 72 bp CAGCGGAGAAGTGGTCCGCATCCCAGATCTGCAGGGTaGGCCGCGCGGGGATCTTGTACTCGGTCTCGTCCC +
Preference number: 6 (lower is better)
Translates to: QRRSGPHPRSAG*AARGSCTRSRP
Trigger: GGGACGAGACCGAGTACAAGATCCCCGCGCGGCTCACCCTGCAGATCTGGGATGCGGACCACTTCTCCGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS GCA 72 bp CTCCCAGGAAGTCCCCATCGTCCCAGGAGCCCACTGTaGCGTCAGTGGCCTGATACCGGACCTCCACGCACA +
Preference number: 6 (lower is better)
Translates to: LPGSPHRPRSPL*RQWPDTGPPRT
Trigger: TGTGCGTGGAGGTCCGGTATCAGGCCACTGACGGCACAGTGGGCTCCTGGGACGATGGGGACTTCCTGGGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS GCA 72 bp GTGTGCCGCTTCACCTGGGCCCGCAGCATCCTGGCCTaGTGCCCCATGTTTTCCAGCTCCCTCATGCAGGAC +
Preference number: 6 (lower is better)
Translates to: VCRFTWARSILA*CPMFSSSLMQD
Trigger: GTCCTGCATGAGGGAGCTGGAAAACATGGGGCAGCAGGCCAGGATGCTGCGGGCCCAGGTGAAGCGGCACAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS GCA 72 bp CAGGTACAGCTCCACCTTGGCCTGCACTGTCCAGCCTaGCGAGCCGAAGCCCCGCTTCCCTGGCAGCTTAAG +
Preference number: 6 (lower is better)
Translates to: QVQLHLGLHCPA*RAEAPLPWQLK
Trigger: CTTAAGCTGCCAGGGAAGCGGGGCTTCGGCTCGGCAGGCTGGACAGTGCAGGCCAAGGTGGAGCTGTACCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS GCA 72 bp GGGGCCCAAAGTGGGGGCCGTCCACTTTGCCGTCTTTaGAGAGGCGGGTCAGGATCTGGCTGGGCTTCATGG +
Preference number: 6 (lower is better)
Translates to: GAQSGGRPLCRL*RGGSGSGWASW
Trigger: CCATGAAGCCCAGCCAGATCCTGACCCGCCTCTGCAAAGACGGCAAAGTGGACGGCCCCCACTTTGGGCCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
ENST00000464574.1
CDS GCA 72 bp GGGTGCAGGTCCGTGGCCTGGAATGGGGAGAAGGGCTaGCTGAGCAGGCTCCCATGCCCTGCTCATCTTCAG +
Preference number: 6 (lower is better)
Translates to: GCRSVAWNGEKG*LSRLPCPAHLQ
Trigger: CTGAAGATGAGCAGGGCATGGGAGCCTGCTCAGGCAGCCCTTCTCCCCATTCCAGGCCACGGACCTGCACCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464574.1
CDS CAA 72 bp ATCCGGTCGCCCCTGCCCCGCAGCTCCGAGACTGTCTaGAGGTGGATGAGCAAGGCCATGCTGGTGTGGGCT +
Preference number: 6 (lower is better)
Translates to: IRSPLPRSSETV*RWMSKAMLVWA
Trigger: AGCCCACACCAGCATGGCCTTGCTCATCCACCTCAAGACAGTCTCGGAGCTGCGGGGCAGGGGCGACCGGAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS CAA 72 bp GGGGGCCCAAAGTGGGGGCCGTCCACTTTGCCGTCTTaGCAGAGGCGGGTCAGGATCTGGCTGGGCTTCATG +
Preference number: 6 (lower is better)
Translates to: GGPKWGPSTLPS*QRRVRIWLGFM
Trigger: CATGAAGCCCAGCCAGATCCTGACCCGCCTCTGCAAAGACGGCAAAGTGGACGGCCCCCACTTTGGGCCCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
ENST00000464574.1
CDS CAA 72 bp ACTCTCCCAGGGGGCCCAAAGTGGGGGCCGTCCACTTaGCCGTCTTTGCAGAGGCGGGTCAGGATCTGGCTG +
Preference number: 6 (lower is better)
Translates to: TLPGGPKWGPST*PSLQRRVRIWL
Trigger: CAGCCAGATCCTGACCCGCCTCTGCAAAGACGGCAAAGTGGACGGCCCCCACTTTGGGCCCCCTGGGAGAGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
ENST00000464574.1
CDS CAA 72 bp CGGTGGCCATCTCCATGGTGCACTGCTTGGCTGTCTTaGCGCCCCGCGGGAACCGGTTCAGGTCCAGCTCGA +
Preference number: 6 (lower is better)
Translates to: RWPSPWCTAWLS*RPAGTGSGPAR
Trigger: TCGAGCTGGACCTGAACCGGTTCCCGCGGGGCGCAAAGACAGCCAAGCAGTGCACCATGGAGATGGCCACCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS CAA 72 bp GCGGGCCAGGAGGGGCCACCAGCCTTTGACGCGCTTTaGCTTGAAGATGGACACGAGGGGCACGTCCACCTC +
Preference number: 6 (lower is better)
Translates to: AGQEGPPAFDAL*LEDGHEGHVHL
Trigger: GAGGTGGACGTGCCCCTCGTGTCCATCTTCAAGCAAAAGCGCGTCAAAGGCTGGTGGCCCCTCCTGGCCCGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS CAA 90 bp GCCACCTTCACTCTCCCAGGGGGCCCAAAGTGGGGGCCGTCCACTTaGCCGTCTTTGCAGAGGCGGGTCAGGATCTGGCTGGGCTTCATG +
Preference number: 6 (lower is better)
Translates to: ATFTLPGGPKWGPST*PSLQRRVRIWLGFM
Trigger: CATGAAGCCCAGCCAGATCCTGACCCGCCTCTGCAAAGACGGCAAAGTGGACGGCCCCCACTTTGGGCCCCCTGGGAGAGTGAAGGTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
ENST00000464574.1
CDS TCA 72 bp CCATCGTCCCAGGAGCCCACTGTGCCGTCAGTGGCCTaGTACCGGACCTCCACGCACAGGCTGGTCTTGATG +
Preference number: 6 (lower is better)
Translates to: PSSQEPTVPSVA*YRTSTHRLVLM
Trigger: CATCAAGACCAGCCTGTGCGTGGAGGTCCGGTATCAGGCCACTGACGGCACAGTGGGCTCCTGGGACGATGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS TCA 72 bp TGTAGAGGCGGCGGCGCTGGTCCGGCCACCAGCTCTTaGTGTAGATGCAGGGCTTTCGCTCCAGGTAGGGCA +
Preference number: 6 (lower is better)
Translates to: CRGGGAGPATSS*CRCRAFAPGRA
Trigger: TGCCCTACCTGGAGCGAAAGCCCTGCATCTACATCAAGAGCTGGTGGCCGGACCAGCGCCGCCGCCTCTACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS TCA 72 bp CTAGCCGGATGGCGATGTAGGGGTCAGCTTTGCCGTTaGTGTCAGCAGGGTGCAGGTCCGTGGCCCGGACCA +
Preference number: 6 (lower is better)
Translates to: LAGWRCRGQLCR*CQQGAGPWPGP
Trigger: TGGTCCGGGCCACGGACCTGCACCCTGCTGACATCAACGGCAAAGCTGACCCCTACATCGCCATCCGGCTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS GCA 72 bp TGCCGCTTCACCTGGGCCCGCAGCATCCTGGCCTGCTaGCCCATGTTTTCCAGCTCCCTCATGCAGGACTTG +
Preference number: 6 (lower is better)
Translates to: CRFTWARSILAC*PMFSSSLMQDL
Trigger: CAAGTCCTGCATGAGGGAGCTGGAAAACATGGGGCAGCAGGCCAGGATGCTGCGGGCCCAGGTGAAGCGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS GCA 72 bp GGTGGCCATCTCCATGGTGCACTGCTTGGCTGTCTTTaGGCCCCGCGGGAACCGGTTCAGGTCCAGCTCGAT +
Preference number: 6 (lower is better)
Translates to: GGHLHGALLGCL*APREPVQVQLD
Trigger: ATCGAGCTGGACCTGAACCGGTTCCCGCGGGGCGCAAAGACAGCCAAGCAGTGCACCATGGAGATGGCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS CCA 72 bp CCCGAGAGTAGAAGGATTGCCCTCGGAAAGTCACTTTaGCGATCCGGTCGCCCCTGCCCCGCAGCTCCGAGA +
Preference number: 6 (lower is better)
Translates to: PESRRIALGKSL*RSGRPCPAAPR
Trigger: TCTCGGAGCTGCGGGGCAGGGGCGACCGGATCGCCAAAGTGACTTTCCGAGGGCAATCCTTCTACTCTCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS CCA 72 bp GTCGTAGCCGGCTTCCCGGGACACGTCCTCTGGGAGTaGCACTTTGTACACGCAGAGGGAGCCCTTGAAGCG +
Preference number: 6 (lower is better)
Translates to: VVAGFPGHVLWE*HFVHAEGALEA
Trigger: CGCTTCAAGGGCTCCCTCTGCGTGTACAAAGTGCCACTCCCAGAGGACGTGTCCCGGGAAGCCGGCTACGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS CCA 72 bp GGTGGAGTCGTAGCCGGCTTCCCGGGACACGTCCTCTaGGAGTGGCACTTTGTACACGCAGAGGGAGCCCTT +
Preference number: 6 (lower is better)
Translates to: GGVVAGFPGHVL*EWHFVHAEGAL
Trigger: AAGGGCTCCCTCTGCGTGTACAAAGTGCCACTCCCAGAGGACGTGTCCCGGGAAGCCGGCTACGACTCCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS CCA 72 bp GGTCATTGCTCGGGATGCCCTGGAACATGCCGTAGGTaGAGTCGTAGCCGGCTTCCCGGGACACGTCCTCTG +
Preference number: 6 (lower is better)
Translates to: GHCSGCPGTCRR*SRSRLPGTRPL
Trigger: CAGAGGACGTGTCCCGGGAAGCCGGCTACGACTCCACCTACGGCATGTTCCAGGGCATCCCGAGCAATGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS CAA 72 bp CCGGCTTCCCGGGACACGTCCTCTGGGAGTGGCACTTaGTACACGCAGAGGGAGCCCTTGAAGCGTCCCACA +
Preference number: 6 (lower is better)
Translates to: PASRDTSSGSGT*YTQREPLKRPT
Trigger: TGTGGGACGCTTCAAGGGCTCCCTCTGCGTGTACAAAGTGCCACTCCCAGAGGACGTGTCCCGGGAAGCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS TCA 72 bp GCTCTGGCTGCGAGTACACGGTTCCCACGTCCATTTTaGAGGAGCCCACCAGGGTGCCACTGCGCAGCAGGT +
Preference number: 6 (lower is better)
Translates to: ALAASTRFPRPF*RSPPGCHCAAG
Trigger: ACCTGCTGCGCAGTGGCACCCTGGTGGGCTCCTTCAAAATGGACGTGGGAACCGTGTACTCGCAGCCAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS TCA 72 bp GCTGCCCCATGTTTTCCAGCTCCCTCATGCAGGACTTaGGGCGCTCCCGGTCAAGCCTGGTGCGGGATGAGT +
Preference number: 6 (lower is better)
Translates to: AAPCFPAPSCRT*GAPGQAWCGMS
Trigger: ACTCATCCCGCACCAGGCTTGACCGGGAGCGCCTCAAGTCCTGCATGAGGGAGCTGGAAAACATGGGGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS TCA 72 bp TCACACGAAGTTGCATGTTCCCAGCCAGCAGGGGGCTaGCCCCACCCGCCTTACCGCGTCCAGCTTCACCAT +
Preference number: 6 (lower is better)
Translates to: SHEVACSQPAGG*PHPPYRVQLHH
Trigger: ATGGTGAAGCTGGACGCGGTAAGGCGGGTGGGGTCAGCCCCCTGCTGGCTGGGAACATGCAACTTCGTGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426958.1
CDS GCA 72 bp AAGTCGTCAGCGGAGAAGTGGTCCGCATCCCAGATCTaGAGGGTGAGCCGCGCGGGGATCTTGTACTCGGTC +
Preference number: 6 (lower is better)
Translates to: KSSAEKWSASQI*RVSRAGILYSV
Trigger: GACCGAGTACAAGATCCCCGCGCGGCTCACCCTGCAGATCTGGGATGCGGACCACTTCTCCGCTGACGACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS CCA 72 bp GCTCCTCCTTGTGAGACCGGTTTTTGCCGAGCTTCATaGCGGAGAACACGCTCCTCCCGGCTCTCCGGAAGC +
Preference number: 6 (lower is better)
Translates to: APPCETGFCRAS*RRTRSSRLSGS
Trigger: GCTTCCGGAGAGCCGGGAGGAGCGTGTTCTCCGCCATGAAGCTCGGCAAAAACCGGTCTCACAAGGAGGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS CCA 72 bp GATCTGGTAGTACTCGAGCTGAGGTGGGAAGCGGGGTaGGCAGTACGCCTCGTCTGCCATCTTCACCAGGGG +
Preference number: 6 (lower is better)
Translates to: DLVVLELRWEAG*AVRLVCHLHQG
Trigger: CCCCTGGTGAAGATGGCAGACGAGGCGTACTGCCCACCCCGCTTCCCACCTCAGCTCGAGTACTACCAGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS CAA 72 bp TGCTCTGGCTGCGAGTACACGGTTCCCACGTCCATTTaGAAGGAGCCCACCAGGGTGCCACTGCGCAGCAGG +
Preference number: 6 (lower is better)
Translates to: CSGCEYTVPTSI*KEPTRVPLRSR
Trigger: CCTGCTGCGCAGTGGCACCCTGGTGGGCTCCTTCAAAATGGACGTGGGAACCGTGTACTCGCAGCCAGAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS CAA 72 bp TGCTGCCCCATGTTTTCCAGCTCCCTCATGCAGGACTaGAGGCGCTCCCGGTCAAGCCTGGTGCGGGATGAG +
Preference number: 6 (lower is better)
Translates to: CCPMFSSSLMQD*RRSRSSLVRDE
Trigger: CTCATCCCGCACCAGGCTTGACCGGGAGCGCCTCAAGTCCTGCATGAGGGAGCTGGAAAACATGGGGCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS CAA 72 bp GGGCAGTACGCCTCGTCTGCCATCTTCACCAGGGGTTaGGCGAAGGTCCGGCCCATGAAGTCAGCTTTGCCC +
Preference number: 6 (lower is better)
Translates to: GQYASSAIFTRG*AKVRPMKSALP
Trigger: GGGCAAAGCTGACTTCATGGGCCGGACCTTCGCCAAACCCCTGGTGAAGATGGCAGACGAGGCGTACTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS CAA 72 bp TCGTCCTCAATCTCAGAGGGCCCAGTGAAGACGCGGTaGGCCACCTTCACTCTCCCAGGGGGCCCAAAGTGG +
Preference number: 6 (lower is better)
Translates to: SSSISEGPVKTR*ATFTLPGGPKW
Trigger: CCACTTTGGGCCCCCTGGGAGAGTGAAGGTGGCCAACCGCGTCTTCACTGGGCCCTCTGAGATTGAGGACGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
ENST00000464574.1
CDS CAA 72 bp GCATCCCAGATCTGCAGGGTGAGCCGCGCGGGGATCTaGTACTCGGTCTCGTCCCAGGAGAACATGGACTCC +
Preference number: 6 (lower is better)
Translates to: ASQICRVSRAGI*YSVSSQENMDS
Trigger: GGAGTCCATGTTCTCCTGGGACGAGACCGAGTACAAGATCCCCGCGCGGCTCACCCTGCAGATCTGGGATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS CAA 72 bp TCCACCTTGCCCGTGAGCTCAAACTCATCGTTCTCATaGCGGGCCAGGAGGGGCCACCAGCCTTTGACGCGC +
Preference number: 6 (lower is better)
Translates to: STLPVSSNSSFS*RARRGHQPLTR
Trigger: GCGCGTCAAAGGCTGGTGGCCCCTCCTGGCCCGCAATGAGAACGATGAGTTTGAGCTCACGGGCAAGGTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS CAA 90 bp AAGCGGGGTGGGCAGTACGCCTCGTCTGCCATCTTCACCAGGGGTTaGGCGAAGGTCCGGCCCATGAAGTCAGCTTTGCCCATGGAATCC +
Preference number: 6 (lower is better)
Translates to: KRGGQYASSAIFTRG*AKVRPMKSALPMES
Trigger: GGATTCCATGGGCAAAGCTGACTTCATGGGCCGGACCTTCGCCAAACCCCTGGTGAAGATGGCAGACGAGGCGTACTGCCCACCCCGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS TCA 72 bp CCGTGGCCCGGACCACATAGACTCGGACCAGCACATTaGTGGGGTCATTGCTCGGGATGCCCTGGAACATGC +
Preference number: 6 (lower is better)
Translates to: PWPGPHRLGPAH*WGHCSGCPGTC
Trigger: GCATGTTCCAGGGCATCCCGAGCAATGACCCCATCAATGTGCTGGTCCGAGTCTATGTGGTCCGGGCCACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS TCA 72 bp TCTGACCGTTCTCGTCCTCAATCTCAGAGGGCCCAGTaGAGACGCGGTTGGCCACCTTCACTCTCCCAGGGG +
Preference number: 6 (lower is better)
Translates to: SDRSRPQSQRAQ*RRGWPPSLSQG
Trigger: CCCCTGGGAGAGTGAAGGTGGCCAACCGCGTCTTCACTGGGCCCTCTGAGATTGAGGACGAGAACGGTCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
ENST00000464574.1
CDS TCA 72 bp CTAGCCGGATGGCGATGTAGGGGTCAGCTTTGCCGTTaGTGTCAGCAGGGTGCAGGTCCGTGGCCTGGAATG +
Preference number: 6 (lower is better)
Translates to: LAGWRCRGQLCR*CQQGAGPWPGM
Trigger: CATTCCAGGCCACGGACCTGCACCCTGCTGACATCAACGGCAAAGCTGACCCCTACATCGCCATCCGGCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464574.1
CDS GCA 72 bp CTGGTCTTTGGGGCTCCTCCTTGTGAGACCGGTTTTTaGCGAGCTTCATGGCGGAGAACACGCTCCTCCCGG +
Preference number: 6 (lower is better)
Translates to: LVFGAPPCETGF*RASWRRTRSSR
Trigger: CCGGGAGGAGCGTGTTCTCCGCCATGAAGCTCGGCAAAAACCGGTCTCACAAGGAGGAGCCCCAAAGACCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS GCA 72 bp ATAATTGTGGATCAGGGACGACTGCACCCCCTTCCCTaGACACTCGATGTCCACCCGTGGCCGGTCCACCTG +
Preference number: 6 (lower is better)
Translates to: IIVDQGRLHPLP*TLDVHPWPVHL
Trigger: CAGGTGGACCGGCCACGGGTGGACATCGAGTGTGCAGGGAAGGGGGTGCAGTCGTCCCTGATCCACAATTAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
ENST00000426958.1
CDS CCA 72 bp GTTGCCACGGTAGATCTGGTAGTACTCGAGCTGAGGTaGGAAGCGGGGTGGGCAGTACGCCTCGTCTGCCAT +
Preference number: 6 (lower is better)
Translates to: VATVDLVVLELR*EAGWAVRLVCH
Trigger: ATGGCAGACGAGGCGTACTGCCCACCCCGCTTCCCACCTCAGCTCGAGTACTACCAGATCTACCGTGGCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS CAA 90 bp TGGAACTGGTGCTCTGGCTGCGAGTACACGGTTCCCACGTCCATTTaGAAGGAGCCCACCAGGGTGCCACTGCGCAGCAGGTTCTTGGAG +
Preference number: 6 (lower is better)
Translates to: WNWCSGCEYTVPTSI*KEPTRVPLRSRFLE
Trigger: CTCCAAGAACCTGCTGCGCAGTGGCACCCTGGTGGGCTCCTTCAAAATGGACGTGGGAACCGTGTACTCGCAGCCAGAGCACCAGTTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS CAA 90 bp AAGTGGTCCGCATCCCAGATCTGCAGGGTGAGCCGCGCGGGGATCTaGTACTCGGTCTCGTCCCAGGAGAACATGGACTCCTTCTTGGAG +
Preference number: 6 (lower is better)
Translates to: KWSASQICRVSRAGI*YSVSSQENMDSFLE
Trigger: CTCCAAGAAGGAGTCCATGTTCTCCTGGGACGAGACCGAGTACAAGATCCCCGCGCGGCTCACCCTGCAGATCTGGGATGCGGACCACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS CAA 90 bp AGCTCAGCCTCCACCTTGCCCGTGAGCTCAAACTCATCGTTCTCATaGCGGGCCAGGAGGGGCCACCAGCCTTTGACGCGCTTTTGCTTG +
Preference number: 6 (lower is better)
Translates to: SSASTLPVSSNSSFS*RARRGHQPLTRFCL
Trigger: CAAGCAAAAGCGCGTCAAAGGCTGGTGGCCCCTCCTGGCCCGCAATGAGAACGATGAGTTTGAGCTCACGGGCAAGGTGGAGGCTGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS TCA 72 bp TCCCCGGCATCACCGGCCTCGTCATCACTTGCGTTCTaGATCAGGTCTACTTCTTCCTCATCCCCCGGCTCC +
Preference number: 6 (lower is better)
Translates to: SPASPASSSLAF*IRSTSSSSPGS
Trigger: GGAGCCGGGGGATGAGGAAGAAGTAGACCTGATTCAGAACGCAAGTGATGACGAGGCCGGTGATGCCGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS TCA 72 bp TCAGGCCTTCTTCCAGCTTGTCGGCAATGTGGTCCATaGTGTTGGCATTGTAGAGGCGGCGGCGCTGGTCCG +
Preference number: 6 (lower is better)
Translates to: SGLLPACRQCGP*CWHCRGGGAGP
Trigger: CGGACCAGCGCCGCCGCCTCTACAATGCCAACATCATGGACCACATTGCCGACAAGCTGGAAGAAGGCCTGA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS TCA 72 bp ACTCTGATTGATGAAGAAGACGCGGGCAAAGGGGTCTaGGAGTCCGCTGCTGTCGGCGGCAAAGAGGCTGCG +
Preference number: 6 (lower is better)
Translates to: TLIDEEDAGKGV*ESAAVGGKEAA
Trigger: CGCAGCCTCTTTGCCGCCGACAGCAGCGGACTCTCAGACCCCTTTGCCCGCGTCTTCTTCATCAATCAGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS GCA 72 bp ATTTTACCTGCACAGCTCTCCGAGATGGGCGTGGCCTaGTCCACCTGCACCTCTGTGGAGCTGGTGAGCTCA +
Preference number: 6 (lower is better)
Translates to: ILPAQLSEMGVA*STCTSVELVSS
Trigger: TGAGCTCACCAGCTCCACAGAGGTGCAGGTGGAGCAGGCCACGCCCATCTCGGAGAGCTGTGCAGGTAAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS GCA 72 bp GGCCAGGTCCCCGGCATCACCGGCCTCGTCATCACTTaGGTTCTGAATCAGGTCTACTTCTTCCTCATCCCC +
Preference number: 6 (lower is better)
Translates to: GQVPGITGLVIT*VLNQVYFFLIP
Trigger: GGGGATGAGGAAGAAGTAGACCTGATTCAGAACGCAAGTGATGACGAGGCCGGTGATGCCGGGGACCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS CCA 72 bp GTAGTTACGTGTGGAGCCGTACATGTTCACCCAGGCTaGGCCCAGTGTGGGCAGGAAGCCTTTGTCTCCGTC +
Preference number: 6 (lower is better)
Translates to: VVTCGAVHVHPG*AQCGQEAFVSV
Trigger: GACGGAGACAAAGGCTTCCTGCCCACACTGGGCCCAGCCTGGGTGAACATGTACGGCTCCACACGTAACTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS CCA 72 bp GGTCCTGATGCTCATCCAGCAGCGTGTAGTTACGTGTaGAGCCGTACATGTTCACCCAGGCTGGGCCCAGTG +
Preference number: 6 (lower is better)
Translates to: GPDAHPAACSYV*SRTCSPRLGPV
Trigger: CACTGGGCCCAGCCTGGGTGAACATGTACGGCTCCACACGTAACTACACGCTGCTGGATGAGCATCAGGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS CCA 72 bp AGTGCCTCAGGGCCAACAGCGCCACATGCTCGTCTGTaGGCTTCCTCTGACCGTTCTCGTCCTCAATCTCAG +
Preference number: 6 (lower is better)
Translates to: SASGPTAPHARL*ASSDRSRPQSQ
Trigger: CTGAGATTGAGGACGAGAACGGTCAGAGGAAGCCCACAGACGAGCATGTGGCGCTGTTGGCCCTGAGGCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
ENST00000464574.1
CDS CAA 72 bp CGCTTCCCTGGCAGCTTAAGGAAGAGCGTCTTGACCTaGGCGCAGTCCTTGCCAGTCTCCTCCTCCACGATG +
Preference number: 6 (lower is better)
Translates to: RFPGSLRKSVLT*AQSLPVSSSTM
Trigger: CATCGTGGAGGAGGAGACTGGCAAGGACTGCGCCAAGGTCAAGACGCTCTTCCTTAAGCTGCCAGGGAAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS CAA 72 bp TCCTCCTCGGTGGAGCCATCCTCATCATCCCCGGTCTaGCCCCGAAGCAAGTTGAAAGTGTGCAGCCAGTCC +
Preference number: 6 (lower is better)
Translates to: SSSVEPSSSSPV*PRSKLKVCSQS
Trigger: GGACTGGCTGCACACTTTCAACTTGCTTCGGGGCAAGACCGGGGATGATGAGGATGGCTCCACCGAGGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS CAA 72 bp GCGAGGAGGAGGAGCAGCAGCAGGAGCAGCAACAGTTaGAGGAGCAGCCAGCGATACGTGTGCCACAAGAAG +
Preference number: 6 (lower is better)
Translates to: ARRRSSSRSSNS*RSSQRYVCHKK
Trigger: CTTCTTGTGGCACACGTATCGCTGGCTGCTCCTCAAACTGTTGCTGCTCCTGCTGCTGCTCCTCCTCCTCGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
CDS CAA 90 bp GCCTGGGAGCAGTCCATCCGTCTCTTGGCTGTCCTTCTCTTCCTCTaGAAGAGACTCATCTCCCAGGAAGTCCCCATCGTCCCAGGAGCC +
Preference number: 6 (lower is better)
Translates to: AWEQSIRLLAVLLFL*KRLISQEVPIVPGA
Trigger: GGCTCCTGGGACGATGGGGACTTCCTGGGAGATGAGTCTCTTCAAGAGGAAGAGAAGGACAGCCAAGAGACGGATGGACTGCTCCCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS CAA 90 bp TTCCCTGGCAGCTTAAGGAAGAGCGTCTTGACCTTGGCGCAGTCCTaGCCAGTCTCCTCCTCCACGATGGAGAAGAGCAGGTCCTTGGAG +
Preference number: 6 (lower is better)
Translates to: FPGSLRKSVLTLAQS*PVSSSTMEKSRSLE
Trigger: CTCCAAGGACCTGCTCTTCTCCATCGTGGAGGAGGAGACTGGCAAGGACTGCGCCAAGGTCAAGACGCTCTTCCTTAAGCTGCCAGGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS TCA 72 bp ACCGCCGGTTCATCTGGTCTTTGGGGCTCCTCCTTGTaGGACCGGTTTTTGCCGAGCTTCATGGCGGAGAAC +
Preference number: 6 (lower is better)
Translates to: TAGSSGLWGSSL*DRFLPSFMAEN
Trigger: GTTCTCCGCCATGAAGCTCGGCAAAAACCGGTCTCACAAGGAGGAGCCCCAAAGACCAGATGAACCGGCGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS TCA 72 bp CATCTTCGTCGGTCTCATTGGCCTTGTGGGGCGTCTTaGTGTTGTCCCCTTTGCCCACCACGGCAACGTCAC +
Preference number: 6 (lower is better)
Translates to: HLRRSHWPCGAS*CCPLCPPRQRH
Trigger: GTGACGTTGCCGTGGTGGGCAAAGGGGACAACATCAAGACGCCCCACAAGGCCAATGAGACCGACGAAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS TCA 72 bp CGAGGAGGAGGAGCAGCAGCAGGAGCAGCAACAGTTTaGGGAGCAGCCAGCGATACGTGTGCCACAAGAAGT +
Preference number: 6 (lower is better)
Translates to: RGGGAAAGAATV*GAASDTCATRS
Trigger: ACTTCTTGTGGCACACGTATCGCTGGCTGCTCCTCAAACTGTTGCTGCTCCTGCTGCTGCTCCTCCTCCTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000402415.8
CDS CCA 72 bp TCGGGATCCAGTCCATCTCCTAGCCGAATGGCCAGATaGTCAAGGTCTTCCATCTCCAGCACCGCCGGTTCA +
Preference number: 6 (lower is better)
Translates to: SGSSPSPSRMAR*SRSSISSTAGS
Trigger: TGAACCGGCGGTGCTGGAGATGGAAGACCTTGACCATCTGGCCATTCGGCTAGGAGATGGACTGGATCCCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS CCA 72 bp ACACCGAGTCGGGATCCAGTCCATCTCCTAGCCGAATaGCCAGATGGTCAAGGTCTTCCATCTCCAGCACCG +
Preference number: 6 (lower is better)
Translates to: TPSRDPVHLLAE*PDGQGLPSPAP
Trigger: CGGTGCTGGAGATGGAAGACCTTGACCATCTGGCCATTCGGCTAGGAGATGGACTGGATCCCGACTCGGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS CCA 72 bp CCACCAGGTCCCAGTCATACACAGCCACCGTCAGCATaGATTCCATGGGGAAGGAGGCCTCGATGTCAAAGG +
Preference number: 6 (lower is better)
Translates to: PPGPSHTQPPSA*IPWGRRPRCQR
Trigger: CCTTTGACATCGAGGCCTCCTTCCCCATGGAATCCATGCTGACGGTGGCTGTGTATGACTGGGACCTGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
ENST00000464574.1
CDS CCA 72 bp CTTTGCCGTCTTTGCAGAGGCGGGTCAGGATCTGGCTaGGCTTCATGGGGTCCCGCCAGATATTGTAGCCAT +
Preference number: 6 (lower is better)
Translates to: LCRLCRGGSGSG*ASWGPARYCSH
Trigger: ATGGCTACAATATCTGGCGGGACCCCATGAAGCCCAGCCAGATCCTGACCCGCCTCTGCAAAGACGGCAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
ENST00000464574.1
CDS CAA 72 bp TCGTCGGTCTCATTGGCCTTGTGGGGCGTCTTGATGTaGTCCCCTTTGCCCACCACGGCAACGTCACACTTC +
Preference number: 6 (lower is better)
Translates to: SSVSLALWGVLM*SPLPTTATSHF
Trigger: GAAGTGTGACGTTGCCGTGGTGGGCAAAGGGGACAACATCAAGACGCCCCACAAGGCCAATGAGACCGACGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS CAA 90 bp CCCTCAATGTCATCTTCGTCGGTCTCATTGGCCTTGTGGGGCGTCTaGATGTTGTCCCCTTTGCCCACCACGGCAACGTCACACTTCACG +
Preference number: 6 (lower is better)
Translates to: PSMSSSSVSLALWGV*MLSPLPTTATSHFT
Trigger: CGTGAAGTGTGACGTTGCCGTGGTGGGCAAAGGGGACAACATCAAGACGCCCCACAAGGCCAATGAGACCGACGAAGATGACATTGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS CCA 72 bp CCCTCAATGTCATCTTCGTCGGTCTCATTGGCCTTGTaGGGCGTCTTGATGTTGTCCCCTTTGCCCACCACG +
Preference number: 6 (lower is better)
Translates to: PSMSSSSVSLAL*GVLMLSPLPTT
Trigger: CGTGGTGGGCAAAGGGGACAACATCAAGACGCCCCACAAGGCCAATGAGACCGACGAAGATGACATTGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS CAA 72 bp GGGCAGTTAGTGGACTCCTTCATGGATGTGTACTTCTaGTCGTCACCCACCTCCACGCACACCACAGGGTCC +
Preference number: 6 (lower is better)
Translates to: GQLVDSFMDVYF*SSPTSTHTTGS
Trigger: GGACCCTGTGGTGTGCGTGGAGGTGGGTGACGACAAGAAGTACACATCCATGAAGGAGTCCACTAACTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS CAA 72 bp TCATCTTCGTCGGTCTCATTGGCCTTGTGGGGCGTCTaGATGTTGTCCCCTTTGCCCACCACGGCAACGTCA +
Preference number: 6 (lower is better)
Translates to: SSSSVSLALWGV*MLSPLPTTATS
Trigger: TGACGTTGCCGTGGTGGGCAAAGGGGACAACATCAAGACGCCCCACAAGGCCAATGAGACCGACGAAGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS CAA 72 bp AGCTTAAGGAAGAGCGTCTTGACCTTGGCGCAGTCCTaGCCAGTCTCCTCCTCCACGATGGAGAAGAGCAGG +
Preference number: 6 (lower is better)
Translates to: SLRKSVLTLAQS*PVSSSTMEKSR
Trigger: CCTGCTCTTCTCCATCGTGGAGGAGGAGACTGGCAAGGACTGCGCCAAGGTCAAGACGCTCTTCCTTAAGCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS CAA 90 bp ACAATGCGCTCCTCCTCGGTGGAGCCATCCTCATCATCCCCGGTCTaGCCCCGAAGCAAGTTGAAAGTGTGCAGCCAGTCCTCAAAGTTA +
Preference number: 6 (lower is better)
Translates to: TMRSSSVEPSSSSPV*PRSKLKVCSQSSKL
Trigger: TAACTTTGAGGACTGGCTGCACACTTTCAACTTGCTTCGGGGCAAGACCGGGGATGATGAGGATGGCTCCACCGAGGAGGAGCGCATTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS TCA 72 bp CCCGCAGGCGACGCTCAGGGTAGGACTTCTCCGTTTTaGTCATCTCCTGTATGTCGTTCAGGCCTTCTTCCA +
Preference number: 6 (lower is better)
Translates to: PAGDAQGRTSPF*SSPVCRSGLLP
Trigger: TGGAAGAAGGCCTGAACGACATACAGGAGATGATCAAAACGGAGAAGTCCTACCCTGAGCGTCGCCTGCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS TCA 72 bp CCATCTTCACCAGGGGTTTGGCGAAGGTCCGGCCCATaGAGTCAGCTTTGCCCATGGAATCCTGGTCATAGA +
Preference number: 6 (lower is better)
Translates to: PSSPGVWRRSGP*SQLCPWNPGHR
Trigger: TCTATGACCAGGATTCCATGGGCAAAGCTGACTTCATGGGCCGGACCTTCGCCAAACCCCTGGTGAAGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS TCA 72 bp ACCCCCTCACGAAGATGTCACTGGACTTCTCCCCTGTaGAGAAGTCGTCGTCCTCCAAGACCACCTCATCTG +
Preference number: 6 (lower is better)
Translates to: TPSRRCHWTSPL*RSRRPPRPPHL
Trigger: CAGATGAGGTGGTCTTGGAGGACGACGACTTCTTCACAGGGGAGAAGTCCAGTGACATCTTCGTGAGGGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS TCA 72 bp CCCGCAGGCGACGCTCAGGGTAGGACTTCTCCGTTTTaGTCATCTCCTGTATGTCGTTCAGGCCTTCTTCCT +
Preference number: 6 (lower is better)
Translates to: PAGDAQGRTSPF*SSPVCRSGLLP
Trigger: AGGAAGAAGGCCTGAACGACATACAGGAGATGATCAAAACGGAGAAGTCCTACCCTGAGCGTCGCCTGCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
CDS TCA 72 bp GATCATCTCCTGTATGTCGTTCAGGCCTTCTTCCTGTaGATCAGGAGTGTGGGTGATGCTGGGCCACAGCCC +
Preference number: 6 (lower is better)
Translates to: DHLLYVVQAFFL*IRSVGDAGPQP
Trigger: GGGCTGTGGCCCAGCATCACCCACACTCCTGATTCACAGGAAGAAGGCCTGAACGACATACAGGAGATGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402415.8
CDS GCA 72 bp TGGAGATGTAGTTCTCCTTGTCGCGGATGTCAGTCTTaGCTAGCCGGATGGCGATGTAGGGGTCAGCTTTGC +
Preference number: 6 (lower is better)
Translates to: WRCSSPCRGCQS*LAGWRCRGQLC
Trigger: GCAAAGCTGACCCCTACATCGCCATCCGGCTAGGCAAGACTGACATCCGCGACAAGGAGAACTACATCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
ENST00000464574.1
CDS CCA 72 bp CCCAGTCATACACAGCCACCGTCAGCATGGATTCCATaGGGAAGGAGGCCTCGATGTCAAAGGACTTCCCAA +
Preference number: 6 (lower is better)
Translates to: PSHTQPPSAWIP*GRRPRCQRTSQ
Trigger: TTGGGAAGTCCTTTGACATCGAGGCCTCCTTCCCCATGGAATCCATGCTGACGGTGGCTGTGTATGACTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
ENST00000464574.1
CDS CAA 72 bp GTGGGCAGGAAGCCTTTGTCTCCGTCATTAGAAATCTaGCGCAGGTCAATGAAGTGGGTGCCGATGGCCACG +
Preference number: 6 (lower is better)
Translates to: VGRKPLSPSLEI*RRSMKWVPMAT
Trigger: CGTGGCCATCGGCACCCACTTCATTGACCTGCGCAAGATTTCTAATGACGGAGACAAAGGCTTCCTGCCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS CAA 90 bp TCGGTGGAGCCATCCTCATCATCCCCGGTCTTGCCCCGAAGCAAGTaGAAAGTGTGCAGCCAGTCCTCAAAGTTATCAAACTCGGACTCC +
Preference number: 6 (lower is better)
Translates to: SVEPSSSSPVLPRSK*KVCSQSSKLSNSDS
Trigger: GGAGTCCGAGTTTGATAACTTTGAGGACTGGCTGCACACTTTCAACTTGCTTCGGGGCAAGACCGGGGATGATGAGGATGGCTCCACCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS TCA 72 bp AGTCCATCCGTCTCTTGGCTGTCCTTCTCTTCCTCTTaGAGAGACTCATCTCCCAGGAAGTCCCCATCGTCC +
Preference number: 6 (lower is better)
Translates to: SPSVSWLSFSSS*RDSSPRKSPSS
Trigger: GGACGATGGGGACTTCCTGGGAGATGAGTCTCTTCAAGAGGAAGAGAAGGACAGCCAAGAGACGGATGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS CCA 72 bp TTGTTGTCATCAATCAGCGTGTCAGTCACCTCCACATaGCTCTCCTCTACCACCTTCTGCAGCACCATGCGG +
Preference number: 6 (lower is better)
Translates to: LLSSISVSVTST*LSSTTFCSTMR
Trigger: CCGCATGGTGCTGCAGAAGGTGGTAGAGGAGAGCCATGTGGAGGTGACTGACACGCTGATTGATGACAACAA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS CCA 72 bp TCTCCGTCATTAGAAATCTTGCGCAGGTCAATGAAGTaGGTGCCGATGGCCACGTCGTTGACCTTGTCCGAG +
Preference number: 6 (lower is better)
Translates to: SPSLEILRRSMK*VPMATSLTLSE
Trigger: CTCGGACAAGGTCAACGACGTGGCCATCGGCACCCACTTCATTGACCTGCGCAAGATTTCTAATGACGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS CCA 72 bp CTTCACCATGGTCTCCAGTTTCTTGATGGGTACCTCTaGCTCCATAGTCACCACAACCTCCCCTGTGGAGTG +
Preference number: 6 (lower is better)
Translates to: LHHGLQFLDGYL*LHSHHNLPCGV
Trigger: CACTCCACAGGGGAGGTTGTGGTGACTATGGAGCCAGAGGTACCCATCAAGAAACTGGAGACCATGGTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272371.7
ENST00000402415.8
ENST00000403946.7
CDS CCA 72 bp CTTCACCATGGTCTCCAGTTTCTTGATGGGTACCTCTaGCTCCATAGTCACCACAACCTCCCCCGTGGTGTT +
Preference number: 6 (lower is better)
Translates to: LHHGLQFLDGYL*LHSHHNLPRGV
Trigger: AACACCACGGGGGAGGTTGTGGTGACTATGGAGCCAGAGGTACCCATCAAGAAACTGGAGACCATGGTGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338581.10
ENST00000339598.8
ENST00000426958.1
CDS CAA 72 bp CAGTCCATCCGTCTCTTGGCTGTCCTTCTCTTCCTCTaGAAGAGACTCATCTCCCAGGAAGTCCCCATCGTC +
Preference number: 6 (lower is better)
Translates to: QSIRLLAVLLFL*KRLISQEVPIV
Trigger: GACGATGGGGACTTCCTGGGAGATGAGTCTCTTCAAGAGGAAGAGAAGGACAGCCAAGAGACGGATGGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS CAA 72 bp AGTTGCTCCTTCATGGTGTCAATGGAGGCAAAGTACTaGGACCACCAGTCCAGCATGCTCTCGTCTGGCTCC +
Preference number: 6 (lower is better)
Translates to: SCSFMVSMEAKY*DHQSSMLSSGS
Trigger: GGAGCCAGACGAGAGCATGCTGGACTGGTGGTCCAAGTACTTTGCCTCCATTGACACCATGAAGGAGCAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS CAA 90 bp TGTTGTCGAAGTTGCTCCTTCATGGTGTCAATGGAGGCAAAGTACTaGGACCACCAGTCCAGCATGCTCTCGTCTGGCTCCTCCTCCTCT +
Preference number: 6 (lower is better)
Translates to: CCRSCSFMVSMEAKY*DHQSSMLSSGSSSS
Trigger: AGAGGAGGAGGAGCCAGACGAGAGCATGCTGGACTGGTGGTCCAAGTACTTTGCCTCCATTGACACCATGAAGGAGCAACTTCGACAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS TCA 72 bp AGGCCTCGATGTCAAAGGACTTCCCAAAGACAGGGTTaGGCTGCTTGGAGATGTAGTTCTCCTTGTCGCGGA +
Preference number: 6 (lower is better)
Translates to: RPRCQRTSQRQG*AAWRCSSPCRG
Trigger: TCCGCGACAAGGAGAACTACATCTCCAAGCAGCTCAACCCTGTCTTTGGGAAGTCCTTTGACATCGAGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
ENST00000464574.1
CDS TCA 72 bp TGGAGATGTTGGTGTTCATGGGGGTTCTTCAGTTCCTaGAGGAAGAAGCCACCTCTGGGCTGTGAGTCTGTG +
Preference number: 6 (lower is better)
Translates to: WRCWCSWGFFSS*RKKPPLGCESV
Trigger: CACAGACTCACAGCCCAGAGGTGGCTTCTTCCTTCAGGAACTGAAGAACCCCCATGAACACCAACATCTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
CDS GCA 72 bp TCATCCCCGGTCTTGCCCCGAAGCAAGTTGAAAGTGTaGAGCCAGTCCTCAAAGTTATCAAACTCGGACTCC +
Preference number: 6 (lower is better)
Translates to: SSPVLPRSKLKV*SQSSKLSNSDS
Trigger: GGAGTCCGAGTTTGATAACTTTGAGGACTGGCTGCACACTTTCAACTTGCTTCGGGGCAAGACCGGGGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS CCA 72 bp CCTGAATCTCCAGCATCTCATTTCTGTCGATGCTGCTaGCCACCGGCCACCGAAATGTCTCATCAAAGTCAG +
Preference number: 6 (lower is better)
Translates to: PESPASHFCRCC*PPATEMSHQSQ
Trigger: CTGACTTTGATGAGACATTTCGGTGGCCGGTGGCCAGCAGCATCGACAGAAATGAGATGCTGGAGATTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS CCA 72 bp GATGCTGACCTGGTAATCCATGGGCCGCCCAGCACTTaGCTCCATCTTAATGTCTGGCTTAGATCGCTTGTT +
Preference number: 6 (lower is better)
Translates to: DADLVIHGPPST*LHLNVWLRSLV
Trigger: AACAAGCGATCTAAGCCAGACATTAAGATGGAGCCAAGTGCTGGGCGGCCCATGGATTACCAGGTCAGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS TCA 72 bp GACCTCATGATCTGGGAGCTCTCGCTAGGGCCATCCTaGGTATCGGTCATCATGAGGAAGTCATCAATTTCC +
Preference number: 6 (lower is better)
Translates to: DLMIWELSLGPS*VSVIMRKSSIS
Trigger: GGAAATTGATGACTTCCTCATGATGACCGATACTCAGGATGGCCCTAGCGAGAGCTCCCAGATCATGAGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402415.8
CDS CAA 72 bp ACCTCCACGCACAGGCTGGTCTTGATGATAGCATTGTaGTCATCAATCAGCGTGTCAGTCACCTCCACATGG +
Preference number: 6 (lower is better)
Translates to: TSTHRLVLMIAL*SSISVSVTSTW
Trigger: CCATGTGGAGGTGACTGACACGCTGATTGATGACAACAATGCTATCATCAAGACCAGCCTGTGCGTGGAGGT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7
CDS CAA 72 bp CTCCTTCTCCTCCAAGTCAATTCCAGAGGGCTCTTGTaGTCGAAGTTGCTCCTTCATGGTGTCAATGGAGGC +
Preference number: 6 (lower is better)
Translates to: LLLLQVNSRGLL*SKLLLHGVNGG
Trigger: GCCTCCATTGACACCATGAAGGAGCAACTTCGACAACAAGAGCCCTCTGGAATTGACTTGGAGGAGAAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS TCA 72 bp CATCCTCATCATCCCCGGTCTTGCCCCGAAGCAAGTTaGAAGTGTGCAGCCAGTCCTCAAAGTTATCAAACT +
Preference number: 6 (lower is better)
Translates to: HPHHPRSCPEAS*KCAASPQSYQT
Trigger: AGTTTGATAACTTTGAGGACTGGCTGCACACTTTCAACTTGCTTCGGGGCAAGACCGGGGATGATGAGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272371.7
ENST00000338581.10
ENST00000339598.8
ENST00000402415.8
ENST00000403946.7
CDS TCA 72 bp TTCCTCATGATCTGGGAGCTCTCGCTAGGGCCATCCTaGGTATCGGTCATCATGAGGAAGTCATCAATTTCC +
Preference number: 6 (lower is better)
Translates to: FLMIWELSLGPS*VSVIMRKSSIS
Trigger: GGAAATTGATGACTTCCTCATGATGACCGATACTCAGGATGGCCCTAGCGAGAGCTCCCAGATCATGAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338581.10
ENST00000339598.8
CDS GCA 72 bp AAACCTGAATCTCCAGCATCTCATTTCTGTCGATGCTaGTGGCCACCGGCCACCGAAATGTCTCATCAAAGT +
Preference number: 6 (lower is better)
Translates to: KPESPASHFCRC*WPPATEMSHQS
Trigger: ACTTTGATGAGACATTTCGGTGGCCGGTGGCCAGCAGCATCGACAGAAATGAGATGCTGGAGATTCAGGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272371.7
ENST00000403946.7