Pregenerated sensors for OSTN (Homo sapiens)
Ensembl gene IDs: ENSG00000188729Ensembl transcript IDs: ENST00000445281.5, ENST00000682035.1
Found 54 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | ATTCTTTCAACTCCTGAGTCCTCCAGGATACTTCCCTATGTGCTATTGCTAGCTTGTACTGAGCTAAAATaGTGTGTGCTTAGCTGGTCC | + |
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Preference number: 2 (lower is better) Translates to: ILSTPESSRILPYVLLLACTELK*CVLSWS Trigger: GGACCAGCTAAGCACACATCATTTTAGCTCAGTACA...AGCTAGCAATAGCACATAGGGAAGTATCCTGGAGGACTCAGGAGTTGAAAGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445281.5 |
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| 3UTR-3UTR TCA 90 bp | ATTCTTTCAACTCCTGAGTCCTCCAGGATACTTCCCTATGTGCTATTGCTAGCTCTGGTGGTAATTCTTTaGCTTCCCTCCTACTTTCAT | + |
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Preference number: 2 (lower is better) Translates to: ILSTPESSRILPYVLLLALVVIL*LPSYFH Trigger: ATGAAAGTAGGAGGGAAGTCAAAGAATTACCACCAG...AGCTAGCAATAGCACATAGGGAAGTATCCTGGAGGACTCAGGAGTTGAAAGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445281.5 |
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| 3UTR-3UTR TCA 90 bp | ATTCTTTCAACTCCTGAGTCCTCCAGGATACTTCCCTATGTGCTATTGCTAGCTCCACGTATCAGACAGTaGTTTTTAGGGTTTACAGAG | + |
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Preference number: 2 (lower is better) Translates to: ILSTPESSRILPYVLLLAPRIRQ*FLGFTE Trigger: CTCTGTAAACCCTAAAAATCACTGTCTGATACGTGG...AGCTAGCAATAGCACATAGGGAAGTATCCTGGAGGACTCAGGAGTTGAAAGAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000445281.5 |
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| 3UTR-3UTR TCA 90 bp | ATTCTTTCAACTCCTGAGTCCTCCAGGATACTTCCCTATGTGCTATTGCTAGCTAACAATGCTGTAATGTaGTGGACTGAAGTTCAAGCT | + |
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Preference number: 2 (lower is better) Translates to: ILSTPESSRILPYVLLLANNAVM*WTEVQA Trigger: AGCTTGAACTTCAGTCCATCACATTACAGCATTGTT...AGCTAGCAATAGCACATAGGGAAGTATCCTGGAGGACTCAGGAGTTGAAAGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445281.5 |
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| 3UTR-3UTR TCA 90 bp | ATTCTTTCAACTCCTGAGTCCTCCAGGATACTTCCCTATGTGCTATTGCTAGCTTATGCTGAAGTGTACTaGGCTAAAATGATGTGTGCT | + |
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Preference number: 2 (lower is better) Translates to: ILSTPESSRILPYVLLLAYAEVY*AKMMCA Trigger: AGCACACATCATTTTAGCTCAGTACACTTCAGCATA...AGCTAGCAATAGCACATAGGGAAGTATCCTGGAGGACTCAGGAGTTGAAAGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445281.5 |
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| 3UTR-3UTR GCA 90 bp | ATTCTTTCAACTCCTGAGTCCTCCAGGATACTTCCCTATGTGCTATTGCTAGCTGTTAAGATTAGCAATTaGCCATTTCTCTCCTCTTCC | + |
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Preference number: 2 (lower is better) Translates to: ILSTPESSRILPYVLLLAVKISN*PFLSSS Trigger: GGAAGAGGAGAGAAATGGGCAATTGCTAATCTTAAC...AGCTAGCAATAGCACATAGGGAAGTATCCTGGAGGACTCAGGAGTTGAAAGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445281.5 |
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| 3UTR-3UTR CCA 90 bp | ATTCTTTCAACTCCTGAGTCCTCCAGGATACTTCCCTATGTGCTATTGCTAGCTCTGAAGTTCAAGCTTTaGAAAGGATTTGCAGAAGGT | + |
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Preference number: 2 (lower is better) Translates to: ILSTPESSRILPYVLLLALKFKL*KGFAEG Trigger: ACCTTCTGCAAATCCTTTCCAAAGCTTGAACTTCAG...AGCTAGCAATAGCACATAGGGAAGTATCCTGGAGGACTCAGGAGTTGAAAGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445281.5 |
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| 3UTR-3UTR CCA 90 bp | ATTCTTTCAACTCCTGAGTCCTCCAGGATACTTCCCTATGTGCTATTGCTAGCTTACCGATCAGACTCTTaGAAAAATGGAATACAGGGA | + |
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Preference number: 2 (lower is better) Translates to: ILSTPESSRILPYVLLLAYRSDS*KNGIQG Trigger: TCCCTGTATTCCATTTTTCCAAGAGTCTGATCGGTA...AGCTAGCAATAGCACATAGGGAAGTATCCTGGAGGACTCAGGAGTTGAAAGAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000445281.5 |
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| 3UTR-3UTR CCA 90 bp | ATTCTTTCAACTCCTGAGTCCTCCAGGATACTTCCCTATGTGCTATTGCTAGCTATATCCAATGCACAATaGACCTATGTGTCCAAGCTA | + |
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Preference number: 2 (lower is better) Translates to: ILSTPESSRILPYVLLLAISNAQ*TYVSKL Trigger: TAGCTTGGACACATAGGTCCATTGTGCATTGGATAT...AGCTAGCAATAGCACATAGGGAAGTATCCTGGAGGACTCAGGAGTTGAAAGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445281.5 |
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| 3UTR-3UTR CCA 90 bp | ATTCTTTCAACTCCTGAGTCCTCCAGGATACTTCCCTATGTGCTATTGCTAGCTAAAATTCACTTCTCTTaGCTACAGCCCTCTACTACA | + |
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Preference number: 2 (lower is better) Translates to: ILSTPESSRILPYVLLLAKIHFS*LQPSTT Trigger: TGTAGTAGAGGGCTGTAGCCAAGAGAAGTGAATTTT...AGCTAGCAATAGCACATAGGGAAGTATCCTGGAGGACTCAGGAGTTGAAAGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445281.5 |
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| 3UTR-3UTR TCA 90 bp | ATTCTTTCAACTCCTGAGTCCTCCAGGATACTTCCCTATGTGCTATTGCTAGCTACTCTCTTTTTATGCTaGAATAAGCCTTTGCTCTAC | + |
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Preference number: 2 (lower is better) Translates to: ILSTPESSRILPYVLLLATLFLC*NKPLLY Trigger: GTAGAGCAAAGGCTTATTTCAGCATAAAAAGAGAGT...AGCTAGCAATAGCACATAGGGAAGTATCCTGGAGGACTCAGGAGTTGAAAGAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000445281.5 |
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| 3UTR-3UTR GCA 90 bp | ATTCTTTCAACTCCTGAGTCCTCCAGGATACTTCCCTATGTGCTATTGCTAGCTTCAAAGTATATCCAATaGACAATGGACCTATGTGTC | + |
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Preference number: 2 (lower is better) Translates to: ILSTPESSRILPYVLLLASKYIQ*TMDLCV Trigger: GACACATAGGTCCATTGTGCATTGGATATACTTTGA...AGCTAGCAATAGCACATAGGGAAGTATCCTGGAGGACTCAGGAGTTGAAAGAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445281.5 |
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| 3UTR-3UTR GCA 90 bp | ATTCTTTCAACTCCTGAGTCCTCCAGGATACTTCCCTATGTGCTATTGCTAGCTGCTGAAATAAGCCTTTaGTCTACTGGACAAAACTTT | + |
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Preference number: 2 (lower is better) Translates to: ILSTPESSRILPYVLLLAAEISL*STGQNF Trigger: AAAGTTTTGTCCAGTAGAGCAAAGGCTTATTTCAGC...AGCTAGCAATAGCACATAGGGAAGTATCCTGGAGGACTCAGGAGTTGAAAGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445281.5 |
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| 3UTR-3UTR CAA 90 bp | ATTCTTTCAACTCCTGAGTCCTCCAGGATACTTCCCTATGTGCTATTGCTAGCTCAAAATTCACTTCTCTaGGCTACAGCCCTCTACTAC | + |
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Preference number: 3 (lower is better) Translates to: ILSTPESSRILPYVLLLAQNSLL*ATALYY Trigger: GTAGTAGAGGGCTGTAGCCAAGAGAAGTGAATTTTG...AGCTAGCAATAGCACATAGGGAAGTATCCTGGAGGACTCAGGAGTTGAAAGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445281.5 |
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| 3UTR-3UTR CAA 90 bp | ATTCTTTCAACTCCTGAGTCCTCCAGGATACTTCCCTATGTGCTATTGCTAGCTAGCTTTGGAAAGGATTaGCAGAAGGTCAGTTCCTTA | + |
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Preference number: 3 (lower is better) Translates to: ILSTPESSRILPYVLLLASFGKD*QKVSSL Trigger: TAAGGAACTGACCTTCTGCAAATCCTTTCCAAAGCT...AGCTAGCAATAGCACATAGGGAAGTATCCTGGAGGACTCAGGAGTTGAAAGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445281.5 |
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| 3UTR-3UTR CAA 90 bp | ATTCTTTCAACTCCTGAGTCCTCCAGGATACTTCCCTATGTGCTATTGCTAGCTACTGAAGTTCAAGCTTaGGAAAGGATTTGCAGAAGG | + |
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Preference number: 3 (lower is better) Translates to: ILSTPESSRILPYVLLLATEVQA*ERICRR Trigger: CCTTCTGCAAATCCTTTCCAAAGCTTGAACTTCAGT...AGCTAGCAATAGCACATAGGGAAGTATCCTGGAGGACTCAGGAGTTGAAAGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445281.5 |
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| 3UTR-3UTR CAA 90 bp | ATTCTTTCAACTCCTGAGTCCTCCAGGATACTTCCCTATGTGCTATTGCTAGCTAGAAAATACACAGCATaGCCTTTCCTCATTCCCCAA | + |
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Preference number: 3 (lower is better) Translates to: ILSTPESSRILPYVLLLARKYTA*PFLIPQ Trigger: TTGGGGAATGAGGAAAGGCAATGCTGTGTATTTTCT...AGCTAGCAATAGCACATAGGGAAGTATCCTGGAGGACTCAGGAGTTGAAAGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000445281.5 |
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| 3UTR-3UTR CAA 90 bp | ATTCTTTCAACTCCTGAGTCCTCCAGGATACTTCCCTATGTGCTATTGCTAGCTTTACCGATCAGACTCTaGGAAAAATGGAATACAGGG | + |
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Preference number: 3 (lower is better) Translates to: ILSTPESSRILPYVLLLALPIRL*EKWNTG Trigger: CCCTGTATTCCATTTTTCCAAGAGTCTGATCGGTAA...AGCTAGCAATAGCACATAGGGAAGTATCCTGGAGGACTCAGGAGTTGAAAGAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000445281.5 |
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| 3UTR-3UTR CAA 90 bp | ATTCTTTCAACTCCTGAGTCCTCCAGGATACTTCCCTATGTGCTATTGCTAGCTTCTGGTGGTAATTCTTaGACTTCCCTCCTACTTTCA | + |
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Preference number: 3 (lower is better) Translates to: ILSTPESSRILPYVLLLASGGNS*TSLLLS Trigger: TGAAAGTAGGAGGGAAGTCAAAGAATTACCACCAGA...AGCTAGCAATAGCACATAGGGAAGTATCCTGGAGGACTCAGGAGTTGAAAGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445281.5 |
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| 3UTR-3UTR CAA 90 bp | ATTCTTTCAACTCCTGAGTCCTCCAGGATACTTCCCTATGTGCTATTGCTAGCTAAGTCAATAGGCTCATaGGGGCTGTGTTTTATTTTT | + |
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Preference number: 3 (lower is better) Translates to: ILSTPESSRILPYVLLLAKSIGS*GLCFIF Trigger: AAAAATAAAACACAGCCCCAATGAGCCTATTGACTT...AGCTAGCAATAGCACATAGGGAAGTATCCTGGAGGACTCAGGAGTTGAAAGAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000445281.5 |
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| 3UTR TCA 72 bp | CACCTTCTCACAACTCACAACACTCTCTTTTTATGCTaGAATAAGCCTTTGCTCTACTGGACAAAACTTTTT | + |
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Preference number: 3 (lower is better) Translates to: HLLTTHNTLFLC*NKPLLYWTKLF Trigger: AAAAAGTTTTGTCCAGTAGAGCAAAGGCTTATTTCAGCATAAAAAGAGAGTGTTGTGAGTTGTGAGAAGGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000445281.5 |
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| CDS-3UTR TCA 90 bp | ATTCTTTCAACTCCTGAGTCCTCCAGGATACTTCCCTATGTGCTATTGCTAGCTCCTGACTGTGGGTGTTaGCTGCACATCTATGACTCC | + |
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Preference number: 4 (lower is better) Translates to: ILSTPESSRILPYVLLLAPDCGC*LHIYDS Trigger: GGAGTCATAGATGTGCAGTCAACACCCACAGTCAGG...AGCTAGCAATAGCACATAGGGAAGTATCCTGGAGGACTCAGGAGTTGAAAGAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445281.5 |
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| CDS-3UTR TCA 90 bp | ATTCTTTCAACTCCTGAGTCCTCCAGGATACTTCCCTATGTGCTATTGCTAGCTATCTACAGAGCCAGCTaGGAGTCTGTCAAGGGGAGA | + |
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Preference number: 4 (lower is better) Translates to: ILSTPESSRILPYVLLLAIYRAS*ESVKGR Trigger: TCTCCCCTTGACAGACTCTCAGCTGGCTCTGTAGAT...AGCTAGCAATAGCACATAGGGAAGTATCCTGGAGGACTCAGGAGTTGAAAGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445281.5 |
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| CDS-3UTR TCA 90 bp | ATTCTTTCAACTCCTGAGTCCTCCAGGATACTTCCCTATGTGCTATTGCTAGCTGTGTCACAGCCAGGATaGAATGTGCACTTGCCAATC | + |
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Preference number: 4 (lower is better) Translates to: ILSTPESSRILPYVLLLAVSQPG*NVHLPI Trigger: GATTGGCAAGTGCACATTTCATCCTGGCTGTGACAC...AGCTAGCAATAGCACATAGGGAAGTATCCTGGAGGACTCAGGAGTTGAAAGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445281.5 |
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| CDS-3UTR TCA 90 bp | ATTCTTTCAACTCCTGAGTCCTCCAGGATACTTCCCTATGTGCTATTGCTAGCTCTGATTTCTCTTCCCTaGCTGTGGGTGTTGACTGCA | + |
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Preference number: 4 (lower is better) Translates to: ILSTPESSRILPYVLLLALISLP*LWVLTA Trigger: TGCAGTCAACACCCACAGTCAGGGAAGAGAAATCAG...AGCTAGCAATAGCACATAGGGAAGTATCCTGGAGGACTCAGGAGTTGAAAGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445281.5 |
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| CDS-3UTR TCA 90 bp | ATTCTTTCAACTCCTGAGTCCTCCAGGATACTTCCCTATGTGCTATTGCTAGCTTGTCAGGTCAGTGGCTaGTTTCTCTTCCCTGACTGT | + |
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Preference number: 4 (lower is better) Translates to: ILSTPESSRILPYVLLLACQVSG*FLFPDC Trigger: ACAGTCAGGGAAGAGAAATCAGCCACTGACCTGACA...AGCTAGCAATAGCACATAGGGAAGTATCCTGGAGGACTCAGGAGTTGAAAGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445281.5 |
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| CDS-3UTR GCA 90 bp | ATTCTTTCAACTCCTGAGTCCTCCAGGATACTTCCCTATGTGCTATTGCTAGCTAGCCAGGATGAAATGTaGACTTGCCAATCTCCAGTC | + |
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Preference number: 4 (lower is better) Translates to: ILSTPESSRILPYVLLLASQDEM*TCQSPV Trigger: GACTGGAGATTGGCAAGTGCACATTTCATCCTGGCT...AGCTAGCAATAGCACATAGGGAAGTATCCTGGAGGACTCAGGAGTTGAAAGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445281.5 |
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| CDS-3UTR TCA 90 bp | ATTCTTTCAACTCCTGAGTCCTCCAGGATACTTCCCTATGTGCTATTGCTAGCTTTGACTGCACATCTATaGCTCCAGAATCAAAGGCCT | + |
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Preference number: 4 (lower is better) Translates to: ILSTPESSRILPYVLLLALTAHL*LQNQRP Trigger: AGGCCTTTGATTCTGGAGTCATAGATGTGCAGTCAA...AGCTAGCAATAGCACATAGGGAAGTATCCTGGAGGACTCAGGAGTTGAAAGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445281.5 |
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| CDS-3UTR TCA 90 bp | ATTCTTTCAACTCCTGAGTCCTCCAGGATACTTCCCTATGTGCTATTGCTAGCTAATTCTTTCAACTCCTaGGTCCTCCAGGATACTTCC | + |
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Preference number: 4 (lower is better) Translates to: ILSTPESSRILPYVLLLANSFNS*VLQDTS Trigger: GGAAGTATCCTGGAGGACTCAGGAGTTGAAAGAATT...AGCTAGCAATAGCACATAGGGAAGTATCCTGGAGGACTCAGGAGTTGAAAGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445281.5 |
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| CDS-3UTR GCA 90 bp | ATTCTTTCAACTCCTGAGTCCTCCAGGATACTTCCCTATGTGCTATTGCTAGCTGATGAAATGTGCACTTaGCAATCTCCAGTCCAGCAT | + |
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Preference number: 4 (lower is better) Translates to: ILSTPESSRILPYVLLLADEMCT*QSPVQH Trigger: ATGCTGGACTGGAGATTGGCAAGTGCACATTTCATC...AGCTAGCAATAGCACATAGGGAAGTATCCTGGAGGACTCAGGAGTTGAAAGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445281.5 |
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| CDS-3UTR GCA 90 bp | ATTCTTTCAACTCCTGAGTCCTCCAGGATACTTCCCTATGTGCTATTGCTAGCTACTGTGGGTGTTGACTaGACATCTATGACTCCAGAA | + |
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Preference number: 4 (lower is better) Translates to: ILSTPESSRILPYVLLLATVGVD*TSMTPE Trigger: TTCTGGAGTCATAGATGTGCAGTCAACACCCACAGT...AGCTAGCAATAGCACATAGGGAAGTATCCTGGAGGACTCAGGAGTTGAAAGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445281.5 |
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| CDS-3UTR CCA 90 bp | ATTCTTTCAACTCCTGAGTCCTCCAGGATACTTCCCTATGTGCTATTGCTAGCTAGTTCATCACAAGGTTaGGGAAAGGCAGACAAGGAT | + |
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Preference number: 4 (lower is better) Translates to: ILSTPESSRILPYVLLLASSSQG*GKADKD Trigger: ATCCTTGTCTGCCTTTCCCCAACCTTGTGATGAACT...AGCTAGCAATAGCACATAGGGAAGTATCCTGGAGGACTCAGGAGTTGAAAGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445281.5 |
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| CDS-3UTR TCA 90 bp | ATTCTTTCAACTCCTGAGTCCTCCAGGATACTTCCCTATGTGCTATTGCTAGCTTCTTCCATATTGCTGTaGCATTTCACCCAAGGAAGT | + |
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Preference number: 4 (lower is better) Translates to: ILSTPESSRILPYVLLLASSILL*HFTQGS Trigger: ACTTCCTTGGGTGAAATGTCACAGCAATATGGAAGA...AGCTAGCAATAGCACATAGGGAAGTATCCTGGAGGACTCAGGAGTTGAAAGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445281.5 |
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| CDS-3UTR TCA 90 bp | ATTCTTTCAACTCCTGAGTCCTCCAGGATACTTCCCTATGTGCTATTGCTAGCTCCTTTTGTCAAAGCATaGAGCAGAACCCAATTGGAT | + |
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Preference number: 4 (lower is better) Translates to: ILSTPESSRILPYVLLLAPFVKA*SRTQLD Trigger: ATCCAATTGGGTTCTGCTTCATGCTTTGACAAAAGG...AGCTAGCAATAGCACATAGGGAAGTATCCTGGAGGACTCAGGAGTTGAAAGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445281.5 |
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| CDS-3UTR GCA 90 bp | ATTCTTTCAACTCCTGAGTCCTCCAGGATACTTCCCTATGTGCTATTGCTAGCTTTCACCCAAGGAAGTTaGATCTCTGTTTACCTTTGT | + |
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Preference number: 4 (lower is better) Translates to: ILSTPESSRILPYVLLLAFTQGS*ISVYLC Trigger: ACAAAGGTAAACAGAGATGCAACTTCCTTGGGTGAA...AGCTAGCAATAGCACATAGGGAAGTATCCTGGAGGACTCAGGAGTTGAAAGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445281.5 |
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| CDS-3UTR GCA 90 bp | ATTCTTTCAACTCCTGAGTCCTCCAGGATACTTCCCTATGTGCTATTGCTAGCTAAGCATCTTCCATATTaGTGTGACATTTCACCCAAG | + |
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Preference number: 4 (lower is better) Translates to: ILSTPESSRILPYVLLLAKHLPY*CDISPK Trigger: CTTGGGTGAAATGTCACAGCAATATGGAAGATGCTT...AGCTAGCAATAGCACATAGGGAAGTATCCTGGAGGACTCAGGAGTTGAAAGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445281.5 |
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| CDS-3UTR CCA 90 bp | ATTCTTTCAACTCCTGAGTCCTCCAGGATACTTCCCTATGTGCTATTGCTAGCTGAAGCAGAACCCAATTaGATTAGAAGCTTACAAATA | + |
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Preference number: 4 (lower is better) Translates to: ILSTPESSRILPYVLLLAEAEPN*IRSLQI Trigger: TATTTGTAAGCTTCTAATCCAATTGGGTTCTGCTTC...AGCTAGCAATAGCACATAGGGAAGTATCCTGGAGGACTCAGGAGTTGAAAGAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445281.5 |
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| CDS TCA 90 bp | AGAGGACTTTTCCTGAGCTCCACAGTGTCAGTGTCACAGCCAGGATaGAATGTGCACTTGCCAATCTCCAGTCCAGCATCTCGTGAAAGA | + |
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Preference number: 5 (lower is better) Translates to: RGLFLSSTVSVSQPG*NVHLPISSPASRER Trigger: TCTTTCACGAGATGCTGGACTGGAGATTGGCAAGTGCACATTTCATCCTGGCTGTGACACTGACACTGTGGAGCTCAGGAAAAGTCCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000445281.5 ENST00000682035.1 |
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| CDS GCA 90 bp | GTCAGGTCAGTGGCTGATTTCTCTTCCCTGACTGTGGGTGTTGACTaGACATCTATGACTCCAGAATCAAAGGCCTCTGTTGTTGTTACA | + |
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Preference number: 5 (lower is better) Translates to: VRSVADFSSLTVGVD*TSMTPESKASVVVT Trigger: TGTAACAACAACAGAGGCCTTTGATTCTGGAGTCATAGATGTGCAGTCAACACCCACAGTCAGGGAAGAGAAATCAGCCACTGACCTGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000445281.5 ENST00000682035.1 |
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| CDS-3UTR CAA 90 bp | ATTCTTTCAACTCCTGAGTCCTCCAGGATACTTCCCTATGTGCTATTGCTAGCTCAAGAAGCAAGAGTTTaGCTGTCAGGTCAGTGGCTG | + |
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Preference number: 5 (lower is better) Translates to: ILSTPESSRILPYVLLLAQEARV*LSGQWL Trigger: CAGCCACTGACCTGACAGCAAAACTCTTGCTTCTTG...AGCTAGCAATAGCACATAGGGAAGTATCCTGGAGGACTCAGGAGTTGAAAGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445281.5 |
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| CDS TCA 90 bp | CACCCAAGGAAGTTGCATAATTGGAATCAATTAGCCTCTGGAATTTaGAAGCCGGTTTCTACCAATCCGATCCATGGGGATACCAAATCG | + |
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Preference number: 5 (lower is better) Translates to: HPRKLHNWNQLASGI*KPVSTNPIHGDTKS Trigger: CGATTTGGTATCCCCATGGATCGGATTGGTAGAAACCGGCTTTCAAATTCCAGAGGCTAATTGATTCCAATTATGCAACTTCCTTGGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000682035.1 |
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| CDS-3UTR CAA 90 bp | ATTCTTTCAACTCCTGAGTCCTCCAGGATACTTCCCTATGTGCTATTGCTAGCTCAAAGGCCTCTGTTGTaGTTACATCTACTGAGAGGA | + |
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Preference number: 5 (lower is better) Translates to: ILSTPESSRILPYVLLLAQRPLL*LHLLRG Trigger: TCCTCTCAGTAGATGTAACAACAACAGAGGCCTTTG...AGCTAGCAATAGCACATAGGGAAGTATCCTGGAGGACTCAGGAGTTGAAAGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445281.5 |
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| CDS CCA 90 bp | ATTAGCCTCTGGAATTTGAAAGCCGGTTTCTACCAATCCGATCCATaGGGATACCAAATCGCCTTTTTGGATGATCTACTACTTTCCTCT | + |
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Preference number: 5 (lower is better) Translates to: ISLWNLKAGFYQSDP*GYQIAFLDDLLLSS Trigger: AGAGGAAAGTAGTAGATCATCCAAAAAGGCGATTTGGTATCCCCATGGATCGGATTGGTAGAAACCGGCTTTCAAATTCCAGAGGCTAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000682035.1 |
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| CDS-3UTR CAA 90 bp | ATTCTTTCAACTCCTGAGTCCTCCAGGATACTTCCCTATGTGCTATTGCTAGCTTTTCACCCAAGGAAGTaGCATCTCTGTTTACCTTTG | + |
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Preference number: 5 (lower is better) Translates to: ILSTPESSRILPYVLLLAFHPRK*HLCLPL Trigger: CAAAGGTAAACAGAGATGCAACTTCCTTGGGTGAAA...AGCTAGCAATAGCACATAGGGAAGTATCCTGGAGGACTCAGGAGTTGAAAGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445281.5 |
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| CDS-3UTR CAA 90 bp | ATTCTTTCAACTCCTGAGTCCTCCAGGATACTTCCCTATGTGCTATTGCTAGCTAATCAAAGGCCTCTGTaGTTGTTACATCTACTGAGA | + |
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Preference number: 5 (lower is better) Translates to: ILSTPESSRILPYVLLLANQRPL*LLHLLR Trigger: TCTCAGTAGATGTAACAACAACAGAGGCCTTTGATT...AGCTAGCAATAGCACATAGGGAAGTATCCTGGAGGACTCAGGAGTTGAAAGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445281.5 |
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| CDS TCA 90 bp | TTAAGAAGTGTGAATAACTTCAGTGAAGCATCTTCCATATTGCTGTaGCATTTCACCCAAGGAAGTTGCATCTCTGTTTACCTTTGTGAT | + |
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Preference number: 5 (lower is better) Translates to: LRSVNNFSEASSILL*HFTQGSCISVYLCD Trigger: ATCACAAAGGTAAACAGAGATGCAACTTCCTTGGGTGAAATGTCACAGCAATATGGAAGATGCTTCACTGAAGTTATTCACACTTCTTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445281.5 |
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| CDS TCA 72 bp | TTCCTGAGCTCCACAGTGTCAGTGTCACAGCCAGGATaGAATGTGCACTTGCCAATCTCCAGTCCAGCATCT | + |
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Preference number: 6 (lower is better) Translates to: FLSSTVSVSQPG*NVHLPISSPAS Trigger: AGATGCTGGACTGGAGATTGGCAAGTGCACATTTCATCCTGGCTGTGACACTGACACTGTGGAGCTCAGGAA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000445281.5 ENST00000682035.1 |
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| CDS GCA 72 bp | GCTCCACAGTGTCAGTGTCACAGCCAGGATGAAATGTaGACTTGCCAATCTCCAGTCCAGCATCTCGTGAAA | + |
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Preference number: 6 (lower is better) Translates to: APQCQCHSQDEM*TCQSPVQHLVK Trigger: TTTCACGAGATGCTGGACTGGAGATTGGCAAGTGCACATTTCATCCTGGCTGTGACACTGACACTGTGGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000445281.5 ENST00000682035.1 |
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| CDS CCA 72 bp | ACCAATCCGATCCATGGGGATACCAAATCGCCTTTTTaGATGATCTACTACTTTCCTCTGTTTACCTTTGTG | + |
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Preference number: 6 (lower is better) Translates to: TNPIHGDTKSPF*MIYYFPLFTFV Trigger: CACAAAGGTAAACAGAGGAAAGTAGTAGATCATCCAAAAAGGCGATTTGGTATCCCCATGGATCGGATTGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000682035.1 |
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| CDS CCA 72 bp | TGGAATTTGAAAGCCGGTTTCTACCAATCCGATCCATaGGGATACCAAATCGCCTTTTTGGATGATCTACTA | + |
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Preference number: 6 (lower is better) Translates to: WNLKAGFYQSDP*GYQIAFLDDLL Trigger: TAGTAGATCATCCAAAAAGGCGATTTGGTATCCCCATGGATCGGATTGGTAGAAACCGGCTTTCAAATTCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000682035.1 |
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| CDS TCA 72 bp | AAGTTGCATAATTGGAATCAATTAGCCTCTGGAATTTaGAAGCCGGTTTCTACCAATCCGATCCATGGGGAT | + |
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Preference number: 6 (lower is better) Translates to: KLHNWNQLASGI*KPVSTNPIHGD Trigger: ATCCCCATGGATCGGATTGGTAGAAACCGGCTTTCAAATTCCAGAGGCTAATTGATTCCAATTATGCAACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000682035.1 |
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| CDS CAA 72 bp | TACCAATCCGATCCATGGGGATACCAAATCGCCTTTTaGGATGATCTACTACTTTCCTCTGTTTACCTTTGT | + |
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Preference number: 6 (lower is better) Translates to: YQSDPWGYQIAF*DDLLLSSVYLC Trigger: ACAAAGGTAAACAGAGGAAAGTAGTAGATCATCCAAAAAGGCGATTTGGTATCCCCATGGATCGGATTGGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000682035.1 |
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| CDS TCA 72 bp | GTGAATAACTTCAGTGAAGCATCTTCCATATTGCTGTaGCATTTCACCCAAGGAAGTTGCATCTCTGTTTAC | + |
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Preference number: 6 (lower is better) Translates to: VNNFSEASSILL*HFTQGSCISVY Trigger: GTAAACAGAGATGCAACTTCCTTGGGTGAAATGTCACAGCAATATGGAAGATGCTTCACTGAAGTTATTCAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445281.5 |
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| CDS TCA 72 bp | GTGAATAACTTCAGTGAAGCATCTTCCATATTGCTGTaGCATTTCACCCAAGGAAGTTGCATAATTGGAATC | + |
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Preference number: 6 (lower is better) Translates to: VNNFSEASSILL*HFTQGSCIIGI Trigger: GATTCCAATTATGCAACTTCCTTGGGTGAAATGTCACAGCAATATGGAAGATGCTTCACTGAAGTTATTCAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000682035.1 |
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