Pregenerated sensors for OSTF1 (Homo sapiens)
Ensembl gene IDs: ENSG00000134996Ensembl transcript IDs: ENST00000346234.7
Found 27 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | TTGTTCTACTTTGGTGAACATAAATGTGCCAAGAATCCAGTCACTTACTGGCAATTACCAACACTTTTCTaGCAAAGACAAAGTTTTGGA | + |
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Preference number: 2 (lower is better) Translates to: LFYFGEHKCAKNPVTYWQLPTLF*QRQSFG Trigger: TCCAAAACTTTGTCTTTGCCAGAAAAGTGTTGGTAA...TTGCCAGTAAGTGACTGGATTCTTGGCACATTTATGTTCACCAAAGTAGAACAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000346234.7 |
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| CDS-3UTR CCA 90 bp | TTGTTCTACTTTGGTGAACATAAATGTGCCAAGAATCCAGTCACTTACTGGCAAACCGGCGCCCACCCTTaGCTGCGGGAAGAGCGGACG | + |
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Preference number: 4 (lower is better) Translates to: LFYFGEHKCAKNPVTYWQTGAHP*LREERT Trigger: CGTCCGCTCTTCCCGCAGCCAAGGGTGGGCGCCGGT...TTGCCAGTAAGTGACTGGATTCTTGGCACATTTATGTTCACCAAAGTAGAACAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000346234.7 |
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| CDS-3UTR GCA 90 bp | AAAAGCTTTACTTACTTAACGACAATGAGTGATACCACAGAAACGGACAAAAGAGCGCCCACCCTTGGCTaGGGGAAGAGCGGACGCAGG | + |
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Preference number: 4 (lower is better) Translates to: KSFTYLTTMSDTTETDKRAPTLG*GKSGRR Trigger: CCTGCGTCCGCTCTTCCCGCAGCCAAGGGTGGGCGC...TCTTTTGTCCGTTTCTGTGGTATCACTCATTGTCGTTAAGTAAGTAAAGCTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000346234.7 |
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| CDS-3UTR CCA 90 bp | AAAAGCTTTACTTACTTAACGACAATGAGTGATACCACAGAAACGGACAAAAGACGCTTGCCCGCCACCTaGCACTCCGGGCACCCCAGT | + |
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Preference number: 4 (lower is better) Translates to: KSFTYLTTMSDTTETDKRRLPAT*HSGHPS Trigger: ACTGGGGTGCCCGGAGTGCCAGGTGGCGGGCAAGCG...TCTTTTGTCCGTTTCTGTGGTATCACTCATTGTCGTTAAGTAAGTAAAGCTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000346234.7 |
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| CDS-3UTR CCA 90 bp | TTGTTCTACTTTGGTGAACATAAATGTGCCAAGAATCCAGTCACTTACTGGCAATTTGACTGGTTTGGGTaGCGGCTTCGACATCTCGCT | + |
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Preference number: 4 (lower is better) Translates to: LFYFGEHKCAKNPVTYWQFDWFG*RLRHLA Trigger: AGCGAGATGTCGAAGCCGCCACCCAAACCAGTCAAA...TTGCCAGTAAGTGACTGGATTCTTGGCACATTTATGTTCACCAAAGTAGAACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000346234.7 |
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| CDS-3UTR CCA 90 bp | TTGTTCTACTTTGGTGAACATAAATGTGCCAAGAATCCAGTCACTTACTGGCAACCAGTTCTTTTTGTCTaGCTTACAACCGTGCGCCTC | + |
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Preference number: 4 (lower is better) Translates to: LFYFGEHKCAKNPVTYWQPVLFV*LTTVRL Trigger: GAGGCGCACGGTTGTAAGCCAGACAAAAAGAACTGG...TTGCCAGTAAGTGACTGGATTCTTGGCACATTTATGTTCACCAAAGTAGAACAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000346234.7 |
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| CDS-3UTR CCA 90 bp | AAAAGCTTTACTTACTTAACGACAATGAGTGATACCACAGAAACGGACAAAAGATCTTTGTGGCCCCCGTaGCAAGCCCAGTATAAGGCA | + |
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Preference number: 4 (lower is better) Translates to: KSFTYLTTMSDTTETDKRSLWPP*QAQYKA Trigger: TGCCTTATACTGGGCTTGCCACGGGGGCCACAAAGA...TCTTTTGTCCGTTTCTGTGGTATCACTCATTGTCGTTAAGTAAGTAAAGCTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000346234.7 |
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| CDS-3UTR CCA 90 bp | AAAAGCTTTACTTACTTAACGACAATGAGTGATACCACAGAAACGGACAAAAGATCCACTATATCTTTGTaGCCCCCGTGGCAAGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: KSFTYLTTMSDTTETDKRSTISL*PPWQAQ Trigger: CTGGGCTTGCCACGGGGGCCACAAAGATATAGTGGA...TCTTTTGTCCGTTTCTGTGGTATCACTCATTGTCGTTAAGTAAGTAAAGCTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000346234.7 |
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| CDS-3UTR GCA 90 bp | TTGTTCTACTTTGGTGAACATAAATGTGCCAAGAATCCAGTCACTTACTGGCAACCCAGTATAAGGCAGTaGTTCCAGCTTTGTCTAAGC | + |
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Preference number: 4 (lower is better) Translates to: LFYFGEHKCAKNPVTYWQPSIRQ*FQLCLS Trigger: GCTTAGACAAAGCTGGAAGCACTGCCTTATACTGGG...TTGCCAGTAAGTGACTGGATTCTTGGCACATTTATGTTCACCAAAGTAGAACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000346234.7 |
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| CDS-3UTR GCA 90 bp | TTGTTCTACTTTGGTGAACATAAATGTGCCAAGAATCCAGTCACTTACTGGCAACTTTTTCAGGAGAGATaGACAGGCAGCATTGGTAGC | + |
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Preference number: 4 (lower is better) Translates to: LFYFGEHKCAKNPVTYWQLFQER*TGSIGS Trigger: GCTACCAATGCTGCCTGTGCATCTCTCCTGAAAAAG...TTGCCAGTAAGTGACTGGATTCTTGGCACATTTATGTTCACCAAAGTAGAACAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000346234.7 |
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| CDS-3UTR CCA 90 bp | TTGTTCTACTTTGGTGAACATAAATGTGCCAAGAATCCAGTCACTTACTGGCAAGACTTTAACTTGCCCTaGTTTGACTGGTTTGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: LFYFGEHKCAKNPVTYWQDFNLP*FDWFGW Trigger: CCACCCAAACCAGTCAAACCAGGGCAAGTTAAAGTC...TTGCCAGTAAGTGACTGGATTCTTGGCACATTTATGTTCACCAAAGTAGAACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000346234.7 |
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| CDS-3UTR TCA 90 bp | TTGTTCTACTTTGGTGAACATAAATGTGCCAAGAATCCAGTCACTTACTGGCAACTTAACGACAATGAGTaGTACCACAGAAACGGACAA | + |
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Preference number: 4 (lower is better) Translates to: LFYFGEHKCAKNPVTYWQLNDNE*YHRNGQ Trigger: TTGTCCGTTTCTGTGGTATCACTCATTGTCGTTAAG...TTGCCAGTAAGTGACTGGATTCTTGGCACATTTATGTTCACCAAAGTAGAACAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000346234.7 |
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| CDS-3UTR GCA 90 bp | TTGTTCTACTTTGGTGAACATAAATGTGCCAAGAATCCAGTCACTTACTGGCAACTGAAGACTTTAACTTaGCCTGGTTTGACTGGTTTG | + |
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Preference number: 4 (lower is better) Translates to: LFYFGEHKCAKNPVTYWQLKTLT*PGLTGL Trigger: CAAACCAGTCAAACCAGGGCAAGTTAAAGTCTTCAG...TTGCCAGTAAGTGACTGGATTCTTGGCACATTTATGTTCACCAAAGTAGAACAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000346234.7 |
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| CDS-3UTR GCA 90 bp | AAAAGCTTTACTTACTTAACGACAATGAGTGATACCACAGAAACGGACAAAAGATCAACCAGCTCAAGTTaGCTCTTTTTGCTGCTTCAT | + |
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Preference number: 4 (lower is better) Translates to: KSFTYLTTMSDTTETDKRSTSSS*LFLLLH Trigger: ATGAAGCAGCAAAAAGAGGCAACTTGAGCTGGTTGA...TCTTTTGTCCGTTTCTGTGGTATCACTCATTGTCGTTAAGTAAGTAAAGCTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000346234.7 |
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| CDS-3UTR GCA 90 bp | AAAAGCTTTACTTACTTAACGACAATGAGTGATACCACAGAAACGGACAAAAGAGATAGTCCTCGGCATTaGTTAATGTTCGAACTGCAT | + |
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Preference number: 4 (lower is better) Translates to: KSFTYLTTMSDTTETDKRDSPRH*LMFELH Trigger: ATGCAGTTCGAACATTAAGCAATGCCGAGGACTATC...TCTTTTGTCCGTTTCTGTGGTATCACTCATTGTCGTTAAGTAAGTAAAGCTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000346234.7 |
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| CDS-3UTR CCA 90 bp | AAAAGCTTTACTTACTTAACGACAATGAGTGATACCACAGAAACGGACAAAAGATTACCAACACTTTTCTaGCAAAGACAAAGTTTTGGA | + |
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Preference number: 4 (lower is better) Translates to: KSFTYLTTMSDTTETDKRLPTLF*QRQSFG Trigger: TCCAAAACTTTGTCTTTGCCAGAAAAGTGTTGGTAA...TCTTTTGTCCGTTTCTGTGGTATCACTCATTGTCGTTAAGTAAGTAAAGCTTTT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000346234.7 |
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| CDS-3UTR CAA 90 bp | TTGTTCTACTTTGGTGAACATAAATGTGCCAAGAATCCAGTCACTTACTGGCAAGACCGGCGCCCACCCTaGGCTGCGGGAAGAGCGGAC | + |
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Preference number: 5 (lower is better) Translates to: LFYFGEHKCAKNPVTYWQDRRPP*AAGRAD Trigger: GTCCGCTCTTCCCGCAGCCAAGGGTGGGCGCCGGTC...TTGCCAGTAAGTGACTGGATTCTTGGCACATTTATGTTCACCAAAGTAGAACAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000346234.7 |
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| CDS-3UTR CAA 90 bp | AAAAGCTTTACTTACTTAACGACAATGAGTGATACCACAGAAACGGACAAAAGACCTGGTTTGACTGGTTaGGGTGGCGGCTTCGACATC | + |
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Preference number: 5 (lower is better) Translates to: KSFTYLTTMSDTTETDKRPGLTG*GGGFDI Trigger: GATGTCGAAGCCGCCACCCAAACCAGTCAAACCAGG...TCTTTTGTCCGTTTCTGTGGTATCACTCATTGTCGTTAAGTAAGTAAAGCTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000346234.7 |
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| CDS-3UTR CAA 90 bp | TTGTTCTACTTTGGTGAACATAAATGTGCCAAGAATCCAGTCACTTACTGGCAAATTTCCACTATATCTTaGTGGCCCCCGTGGCAAGCC | + |
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Preference number: 5 (lower is better) Translates to: LFYFGEHKCAKNPVTYWQISTIS*WPPWQA Trigger: GGCTTGCCACGGGGGCCACAAAGATATAGTGGAAAT...TTGCCAGTAAGTGACTGGATTCTTGGCACATTTATGTTCACCAAAGTAGAACAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000346234.7 |
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| CDS-3UTR CAA 90 bp | AAAAGCTTTACTTACTTAACGACAATGAGTGATACCACAGAAACGGACAAAAGAGATGCACAGGCAGCATaGGTAGCCATGTCGAAGGCC | + |
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Preference number: 5 (lower is better) Translates to: KSFTYLTTMSDTTETDKRDAQAA*VAMSKA Trigger: GGCCTTCGACATGGCTACCAATGCTGCCTGTGCATC...TCTTTTGTCCGTTTCTGTGGTATCACTCATTGTCGTTAAGTAAGTAAAGCTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000346234.7 |
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| CDS-3UTR CAA 90 bp | AAAAGCTTTACTTACTTAACGACAATGAGTGATACCACAGAAACGGACAAAAGAGCACCCCAGTTCTTTTaGTCTGGCTTACAACCGTGC | + |
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Preference number: 5 (lower is better) Translates to: KSFTYLTTMSDTTETDKRAPQFF*SGLQPC Trigger: GCACGGTTGTAAGCCAGACAAAAAGAACTGGGGTGC...TCTTTTGTCCGTTTCTGTGGTATCACTCATTGTCGTTAAGTAAGTAAAGCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000346234.7 |
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| CDS-3UTR CAA 90 bp | TTGTTCTACTTTGGTGAACATAAATGTGCCAAGAATCCAGTCACTTACTGGCAATCTGAAGACTTTAACTaGCCCTGGTTTGACTGGTTT | + |
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Preference number: 5 (lower is better) Translates to: LFYFGEHKCAKNPVTYWQSEDFN*PWFDWF Trigger: AAACCAGTCAAACCAGGGCAAGTTAAAGTCTTCAGA...TTGCCAGTAAGTGACTGGATTCTTGGCACATTTATGTTCACCAAAGTAGAACAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000346234.7 |
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| CDS-3UTR CAA 90 bp | AAAAGCTTTACTTACTTAACGACAATGAGTGATACCACAGAAACGGACAAAAGACTCAACCAGCTCAAGTaGCCTCTTTTTGCTGCTTCA | + |
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Preference number: 5 (lower is better) Translates to: KSFTYLTTMSDTTETDKRLNQLK*PLFAAS Trigger: TGAAGCAGCAAAAAGAGGCAACTTGAGCTGGTTGAG...TCTTTTGTCCGTTTCTGTGGTATCACTCATTGTCGTTAAGTAAGTAAAGCTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000346234.7 |
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| CDS-3UTR CAA 90 bp | AAAAGCTTTACTTACTTAACGACAATGAGTGATACCACAGAAACGGACAAAAGAGCTGTATCTCCCAACTaGTTCTGCTGGTTCAGTTCA | + |
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Preference number: 5 (lower is better) Translates to: KSFTYLTTMSDTTETDKRAVSPN*FCWFSS Trigger: TGAACTGAACCAGCAGAACAAGTTGGGAGATACAGC...TCTTTTGTCCGTTTCTGTGGTATCACTCATTGTCGTTAAGTAAGTAAAGCTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000346234.7 |
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| CDS-3UTR CAA 90 bp | TTGTTCTACTTTGGTGAACATAAATGTGCCAAGAATCCAGTCACTTACTGGCAATCTTCTTGTTCTACTTaGGTGAACATAAATGTGCCA | + |
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Preference number: 5 (lower is better) Translates to: LFYFGEHKCAKNPVTYWQSSCST*VNINVP Trigger: TGGCACATTTATGTTCACCAAAGTAGAACAAGAAGA...TTGCCAGTAAGTGACTGGATTCTTGGCACATTTATGTTCACCAAAGTAGAACAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000346234.7 |
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| CDS CCA 72 bp | TACAACCGTGCGCCTCCTAGGACCGGCGCCCACCCTTaGCTGCGGGAAGAGCGGACGCAGGCAGAGCGGCTC | + |
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Preference number: 6 (lower is better) Translates to: YNRAPPRTGAHP*LREERTQAERL Trigger: GAGCCGCTCTGCCTGCGTCCGCTCTTCCCGCAGCCAAGGGTGGGCGCCGGTCCTAGGAGGCGCACGGTTGTA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000346234.7 |
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| CDS CCA 72 bp | GAAGACTTTAACTTGCCCTGGTTTGACTGGTTTGGGTaGCGGCTTCGACATCTCGCTTCCTGGAGCTGCAAA | + |
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Preference number: 6 (lower is better) Translates to: EDFNLPWFDWFG*RLRHLASWSCK Trigger: TTTGCAGCTCCAGGAAGCGAGATGTCGAAGCCGCCACCCAAACCAGTCAAACCAGGGCAAGTTAAAGTCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000346234.7 |
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