RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OSMR (Homo sapiens)

Ensembl gene IDs: ENSG00000145623

Ensembl transcript IDs: ENST00000274276.8, ENST00000502536.5, ENST00000508882.1, ENST00000509237.5, ENST00000513831.1

Found 346 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCAGGTGTGGTAGCATGCACCTGGAGTCCTAGGTGCTCTGGAGGCTaGGGCAGGAGAACTGTTTGTTTGAATCTAGGAGGCGGAAGCTGC +
Preference number: 1 (lower is better)
Translates to: SGVVACTWSPRCSGG*GRRTVCLNLGGGSC
Trigger: GCAGCTTCCGCCTCCTAGATTCAAACAAACAGTTCTCCTGCCCCAGCCTCCAGAGCACCTAGGACTCCAGGTGCATGCTACCACACCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274276.8
3UTR GCA 90 bp GGCTGGGGCAGGAGAACTGTTTGTTTGAATCTAGGAGGCGGAAGCTaGAGTGAGCTGAGATTGCACCAAAAGAACCAACATGTACTAAAA +
Preference number: 1 (lower is better)
Translates to: GWGRRTVCLNLGGGS*SELRLHQKNQHVLK
Trigger: TTTTAGTACATGTTGGTTCTTTTGGTGCAATCTCAGCTCACTGCAGCTTCCGCCTCCTAGATTCAAACAAACAGTTCTCCTGCCCCAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274276.8
3UTR TCA 90 bp GGGCAGGAGAACTGTTTGTTTGAATCTAGGAGGCGGAAGCTGCAGTaGGCTGAGATTGCACCAAAAGAACCAACATGTACTAAAATACCA +
Preference number: 1 (lower is better)
Translates to: GQENCLFESRRRKLQ*AEIAPKEPTCTKIP
Trigger: TGGTATTTTAGTACATGTTGGTTCTTTTGGTGCAATCTCAGCTCACTGCAGCTTCCGCCTCCTAGATTCAAACAAACAGTTCTCCTGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274276.8
3UTR CCA 90 bp CCAGTTGTGTACCAGGTGCTTTGCATATATTGGTTTGGGATATATTaGTTCAGAGGAGACAAAGCTGCTCCAGAGCCAACACGGAATTTC +
Preference number: 1 (lower is better)
Translates to: PVVYQVLCIYWFGIY*FRGDKAAPEPTRNF
Trigger: GAAATTCCGTGTTGGCTCTGGAGCAGCTTTGTCTCCTCTGAACCAATATATCCCAAACCAATATATGCAAAGCACCTGGTACACAACTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274276.8
3UTR TCA 90 bp ATTGTGTCTGTATTGAAATTCTGGGTTTCCAGCCCAGCAACCAACTaGGTGCAATATGTAGTCATTCAGGTAAGTGATCACGTCCCACCT +
Preference number: 1 (lower is better)
Translates to: IVSVLKFWVSSPATN*VQYVVIQVSDHVPP
Trigger: AGGTGGGACGTGATCACTTACCTGAATGACTACATATTGCACTCAGTTGGTTGCTGGGCTGGAAACCCAGAATTTCAATACAGACACAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509237.5
3UTR TCA 90 bp GATAATTATCTTGGCGGAAGGAGCGAAGGTGGGGGCGTTACAGGATaGGATATGACAGAAGTTATTGTTAGAGTCCTAGTTTTGAAGTTG +
Preference number: 1 (lower is better)
Translates to: DNYLGGRSEGGGVTG*DMTEVIVRVLVLKL
Trigger: CAACTTCAAAACTAGGACTCTAACAATAACTTCTGTCATATCTCATCCTGTAACGCCCCCACCTTCGCTCCTTCCGCCAAGATAATTATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502536.5
3UTR CCA 90 bp ACATGTACTAAAATACCAGTTGTGTACCAGGTGCTTTGCATATATTaGTTTGGGATATATTGGTTCAGAGGAGACAAAGCTGCTCCAGAG +
Preference number: 1 (lower is better)
Translates to: TCTKIPVVYQVLCIY*FGIYWFRGDKAAPE
Trigger: CTCTGGAGCAGCTTTGTCTCCTCTGAACCAATATATCCCAAACCAATATATGCAAAGCACCTGGTACACAACTGGTATTTTAGTACATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274276.8
3UTR-3UTR TCA 90 bp TGCAAGGCATTGGGCACCAGAAGCATGAGCATAGGCAGAGCCATTTCCACCATGAGGCGGAGGTTGCAGTaGGCCAAGGCTGCACCATTG +
Preference number: 2 (lower is better)
Translates to: CKALGTRSMSIGRAISTMRRRLQ*AKAAPL
Trigger: CAATGGTGCAGCCTTGGCTCACTGCAACCTCCGCCT...CATGGTGGAAATGGCTCTGCCTATGCTCATGCTTCTGGTGCCCAATGCCTTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274276.8
3UTR-3UTR GCA 90 bp TGCAAGGCATTGGGCACCAGAAGCATGAGCATAGGCAGAGCCATTTCCACCATGCTGAGGCAGGAGAATTaGTTGACCCTGGGAGGCGGA +
Preference number: 2 (lower is better)
Translates to: CKALGTRSMSIGRAISTMLRQEN*LTLGGG
Trigger: TCCGCCTCCCAGGGTCAAGCAATTCTCCTGCCTCAG...CATGGTGGAAATGGCTCTGCCTATGCTCATGCTTCTGGTGCCCAATGCCTTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274276.8
3UTR-3UTR TCA 90 bp TGCAAGGCATTGGGCACCAGAAGCATGAGCATAGGCAGAGCCATTTCCACCATGAGGCGGAAGCTGCAGTaGGCTGAGATTGCACCAAAA +
Preference number: 2 (lower is better)
Translates to: CKALGTRSMSIGRAISTMRRKLQ*AEIAPK
Trigger: TTTTGGTGCAATCTCAGCTCACTGCAGCTTCCGCCT...CATGGTGGAAATGGCTCTGCCTATGCTCATGCTTCTGGTGCCCAATGCCTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274276.8
3UTR-3UTR GCA 90 bp TGCAAGGCATTGGGCACCAGAAGCATGAGCATAGGCAGAGCCATTTCCACCATGACCCAGACAACCTACTaGAGAGTCCAAAGGATGCTA +
Preference number: 2 (lower is better)
Translates to: CKALGTRSMSIGRAISTMTQTTY*RVQRML
Trigger: TAGCATCCTTTGGACTCTGCAGTAGGTTGTCTGGGT...CATGGTGGAAATGGCTCTGCCTATGCTCATGCTTCTGGTGCCCAATGCCTTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274276.8
3UTR-3UTR CCA 90 bp GGAGGCTGGGGCAGGAGAACTGTTTGTTTGAATCTAGGAGGCGGAAGCTGCAGTGCAAGCTTGCTCCAATaGGGAGTGTTAAGTTCCATA +
Preference number: 2 (lower is better)
Translates to: GGWGRRTVCLNLGGGSCSASLLQ*GVLSSI
Trigger: TATGGAACTTAACACTCCCCATTGGAGCAAGCTTGC...ACTGCAGCTTCCGCCTCCTAGATTCAAACAAACAGTTCTCCTGCCCCAGCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274276.8
3UTR-3UTR TCA 90 bp TGCAAGGCATTGGGCACCAGAAGCATGAGCATAGGCAGAGCCATTTCCACCATGTTCCTCAGTAAAAACTaGACTTCTAGGACCACAGCC +
Preference number: 2 (lower is better)
Translates to: CKALGTRSMSIGRAISTMFLSKN*TSRTTA
Trigger: GGCTGTGGTCCTAGAAGTTCAGTTTTTACTGAGGAA...CATGGTGGAAATGGCTCTGCCTATGCTCATGCTTCTGGTGCCCAATGCCTTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274276.8
3UTR-3UTR TCA 90 bp TGCAAGGCATTGGGCACCAGAAGCATGAGCATAGGCAGAGCCATTTCCACCATGATGATGGCAGAATACTaGTGTCTATGGAGCAGAAGT +
Preference number: 2 (lower is better)
Translates to: CKALGTRSMSIGRAISTMMMAEY*CLWSRS
Trigger: ACTTCTGCTCCATAGACATCAGTATTCTGCCATCAT...CATGGTGGAAATGGCTCTGCCTATGCTCATGCTTCTGGTGCCCAATGCCTTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274276.8
3UTR-3UTR GCA 90 bp TCCTCTCACGGTTCCAGGTCACAGTGGGGCCTGAGTCTGACAGATCCCTGGATTTCCAGGCCCTTTGCATaGTGTAGTTATTTTCATTTT +
Preference number: 2 (lower is better)
Translates to: SSHGSRSQWGLSLTDPWISRPFA*CSYFHF
Trigger: AAAATGAAAATAACTACAGCATGCAAAGGGCCTGGA...AATCCAGGGATCTGTCAGACTCAGGCCCCACTGTGACCTGGAACCGTGAGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509237.5
3UTR-3UTR TCA 90 bp GGTGCTTTGCATATATTGGTTTGGGATATATTGGTTCAGAGGAGACAAAGCTGCCACCCTGTACAGTACTaGGTGGGAGTCTGTAGAGTG +
Preference number: 2 (lower is better)
Translates to: GALHILVWDILVQRRQSCHPVQY*VGVCRV
Trigger: CACTCTACAGACTCCCACTCAGTACTGTACAGGGTG...GCAGCTTTGTCTCCTCTGAACCAATATATCCCAAACCAATATATGCAAAGCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274276.8
3UTR-3UTR GCA 90 bp GAGCTGAGATTGCACCAAAAGAACCAACATGTACTAAAATACCAGTTGTGTACCATTAGATTAGAGCTATaGCCCCCGCCCCCACCCACA +
Preference number: 2 (lower is better)
Translates to: ELRLHQKNQHVLKYQLCTIRLEL*PPPPPT
Trigger: TGTGGGTGGGGGCGGGGGGCATAGCTCTAATCTAAT...GGTACACAACTGGTATTTTAGTACATGTTGGTTCTTTTGGTGCAATCTCAGCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000274276.8
3UTR-3UTR TCA 90 bp GTTATTGTTAGAGTCCTAGTTTTGAAGTTGGGTAGTAAGCTCATTGGTGCTCGTCACCTCCGCTGTGAATaGGGCAAAGATCTACAGCAC +
Preference number: 2 (lower is better)
Translates to: VIVRVLVLKLGSKLIGARHLRCE*GKDLQH
Trigger: GTGCTGTAGATCTTTGCCTCATTCACAGCGGAGGTG...ACGAGCACCAATGAGCTTACTACCCAACTTCAAAACTAGGACTCTAACAATAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502536.5
3UTR-3UTR TCA 90 bp TACACACGCACACAATTTAAAGTGATAATTATCTTGGCGGAAGGAGCGAAGGTGCTCTCACCTCCGCTGTaGATGAGGCAAAGATCTACA +
Preference number: 2 (lower is better)
Translates to: YTRTQFKVIIILAEGAKVLSPPL*MRQRST
Trigger: TGTAGATCTTTGCCTCATTCACAGCGGAGGTGAGAG...CACCTTCGCTCCTTCCGCCAAGATAATTATCACTTTAAATTGTGTGCGTGTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502536.5
3UTR-3UTR TCA 90 bp AGAGTCCTAGTTTTGAAGTTGGGTAGTAAGCTCATTGGTGCTCGTGACATTATTGGATGCGTGCATCCATaGGGAGAAACGTGGCATGAA +
Preference number: 2 (lower is better)
Translates to: RVLVLKLGSKLIGARDIIGCVHP*GETWHE
Trigger: TTCATGCCACGTTTCTCCTCATGGATGCACGCATCC...AATAATGTCACGAGCACCAATGAGCTTACTACCCAACTTCAAAACTAGGACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502536.5
3UTR CAA 90 bp ACCAGTTGTGTACCAGGTGCTTTGCATATATTGGTTTGGGATATATaGGTTCAGAGGAGACAAAGCTGCTCCAGAGCCAACACGGAATTT +
Preference number: 2 (lower is better)
Translates to: TSCVPGALHILVWDI*VQRRQSCSRANTEF
Trigger: AAATTCCGTGTTGGCTCTGGAGCAGCTTTGTCTCCTCTGAACCAATATATCCCAAACCAATATATGCAAAGCACCTGGTACACAACTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274276.8
3UTR CAA 90 bp TTTAGGCCAGTTGTTGACAGCCACATTATTTTGAGGTGTGGCTACTaGTTTCTCTTCATAGTGTTGAATGGCACAGTGCAAGGCATTGGG +
Preference number: 2 (lower is better)
Translates to: FRPVVDSHIILRCGY*FLFIVLNGTVQGIG
Trigger: CCCAATGCCTTGCACTGTGCCATTCAACACTATGAAGAGAAACAAGTAGCCACACCTCAAAATAATGTGGCTGTCAACAACTGGCCTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274276.8
3UTR CAA 90 bp ACTGTTTGTTTGAATCTAGGAGGCGGAAGCTGCAGTGAGCTGAGATaGCACCAAAAGAACCAACATGTACTAAAATACCAGTTGTGTACC +
Preference number: 2 (lower is better)
Translates to: TVCLNLGGGSCSELR*HQKNQHVLKYQLCT
Trigger: GGTACACAACTGGTATTTTAGTACATGTTGGTTCTTTTGGTGCAATCTCAGCTCACTGCAGCTTCCGCCTCCTAGATTCAAACAAACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274276.8
3UTR CAA 90 bp GTACTAAAATACCAGTTGTGTACCAGGTGCTTTGCATATATTGGTTaGGGATATATTGGTTCAGAGGAGACAAAGCTGCTCCAGAGCCAA +
Preference number: 2 (lower is better)
Translates to: VLKYQLCTRCFAYIG*GYIGSEETKLLQSQ
Trigger: TTGGCTCTGGAGCAGCTTTGTCTCCTCTGAACCAATATATCCCAAACCAATATATGCAAAGCACCTGGTACACAACTGGTATTTTAGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274276.8
3UTR-3UTR CCA 90 bp GAGCTGAGATTGCACCAAAAGAACCAACATGTACTAAAATACCAGTTGTGTACCCTGTACAGTACTGAGTaGGAGTCTGTAGAGTGGTTA +
Preference number: 2 (lower is better)
Translates to: ELRLHQKNQHVLKYQLCTLYSTE*ESVEWL
Trigger: TAACCACTCTACAGACTCCCACTCAGTACTGTACAG...GGTACACAACTGGTATTTTAGTACATGTTGGTTCTTTTGGTGCAATCTCAGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274276.8
3UTR-3UTR TCA 90 bp TTGGCAGAGTCTGTGGTGAAAGTTGATGCCAGTTCTGATGATCTCTGGAAATGTTCCAGGTGCAAAGACTaGCAACACTTTTTACAAAAT +
Preference number: 2 (lower is better)
Translates to: LAESVVKVDASSDDLWKCSRCKD*QHFLQN
Trigger: ATTTTGTAAAAAGTGTTGTCAGTCTTTGCACCTGGA...ACATTTCCAGAGATCATCAGAACTGGCATCAACTTTCACCACAGACTCTGCCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513831.1
3UTR-3UTR CCA 90 bp TGCAGTGAGCTGAGATTGCACCAAAAGAACCAACATGTACTAAAATACCAGTTGTGGGAGTCTGTAGAGTaGTTAATGCATATCCTTAGG +
Preference number: 2 (lower is better)
Translates to: CSELRLHQKNQHVLKYQLWESVE*LMHILR
Trigger: CCTAAGGATATGCATTAACCACTCTACAGACTCCCA...CAACTGGTATTTTAGTACATGTTGGTTCTTTTGGTGCAATCTCAGCTCACTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274276.8
3UTR-3UTR CCA 90 bp TTCCACTGTGAACAGCCCTGTCCAGGCCCTTTGCATGCTGTAGTTATTTTCATTAGCCAAAACAACATATaGCAACAGATTGAATGTAGA +
Preference number: 2 (lower is better)
Translates to: FHCEQPCPGPLHAVVIFISQNNI*QQIECR
Trigger: TCTACATTCAATCTGTTGCCATATGTTGTTTTGGCT...AATGAAAATAACTACAGCATGCAAAGGGCCTGGACAGGGCTGTTCACAGTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509237.5
3UTR-3UTR GCA 90 bp ACAGAAGTTATTGTTAGAGTCCTAGTTTTGAAGTTGGGTAGTAAGCTCATTGGTATAATAGGGGATGCGTaGATCCATGAGGAGAAACGT +
Preference number: 2 (lower is better)
Translates to: TEVIVRVLVLKLGSKLIGIIGDA*IHEEKR
Trigger: ACGTTTCTCCTCATGGATGCACGCATCCCCTATTAT...ACCAATGAGCTTACTACCCAACTTCAAAACTAGGACTCTAACAATAACTTCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502536.5
3UTR CAA 90 bp GAGCTGAGATTGCACCAAAAGAACCAACATGTACTAAAATACCAGTaGTGTACCAGGTGCTTTGCATATATTGGTTTGGGATATATTGGT +
Preference number: 2 (lower is better)
Translates to: ELRLHQKNQHVLKYQ*CTRCFAYIGLGYIG
Trigger: ACCAATATATCCCAAACCAATATATGCAAAGCACCTGGTACACAACTGGTATTTTAGTACATGTTGGTTCTTTTGGTGCAATCTCAGCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274276.8
3UTR-3UTR CAA 90 bp TGCAAGGCATTGGGCACCAGAAGCATGAGCATAGGCAGAGCCATTTCCACCATGAGGCAGGAGAATTGCTaGACCCTGGGAGGCGGAGGT +
Preference number: 3 (lower is better)
Translates to: CKALGTRSMSIGRAISTMRQENC*TLGGGG
Trigger: ACCTCCGCCTCCCAGGGTCAAGCAATTCTCCTGCCT...CATGGTGGAAATGGCTCTGCCTATGCTCATGCTTCTGGTGCCCAATGCCTTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274276.8
3UTR CCA 72 bp GTAGCATGCACCTGGAGTCCTAGGTGCTCTGGAGGCTaGGGCAGGAGAACTGTTTGTTTGAATCTAGGAGGC +
Preference number: 3 (lower is better)
Translates to: VACTWSPRCSGG*GRRTVCLNLGG
Trigger: GCCTCCTAGATTCAAACAAACAGTTCTCCTGCCCCAGCCTCCAGAGCACCTAGGACTCCAGGTGCATGCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274276.8
3UTR TCA 72 bp AGTCTGACAGATCCCTGGATTAGGTCTTTTCCACTGTaGACAGCCCTGTCCAGGCCCTTTGCATGCTGTAGT +
Preference number: 3 (lower is better)
Translates to: SLTDPWIRSFPL*TALSRPFACCS
Trigger: ACTACAGCATGCAAAGGGCCTGGACAGGGCTGTTCACAGTGGAAAAGACCTAATCCAGGGATCTGTCAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509237.5
3UTR TCA 72 bp CACACTGATATGCCAAATTATGTTATGCTGAGATGCTaGTCCTCTCACGGTTCCAGGTCACAGTGGGGCCTG +
Preference number: 3 (lower is better)
Translates to: HTDMPNYVMLRC*SSHGSRSQWGL
Trigger: CAGGCCCCACTGTGACCTGGAACCGTGAGAGGATCAGCATCTCAGCATAACATAATTTGGCATATCAGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509237.5
3UTR CCA 72 bp ACTTCTAGGACCACAGCCACCCTGTACAGTACTGAGTaGGAGTCTGTAGAGTGGTTAATGCATATCCTTAGG +
Preference number: 3 (lower is better)
Translates to: TSRTTATLYSTE*ESVEWLMHILR
Trigger: CCTAAGGATATGCATTAACCACTCTACAGACTCCCACTCAGTACTGTACAGGGTGGCTGTGGTCCTAGAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274276.8
3UTR TCA 72 bp AGCTGCAGCACACTGATATGCCAAATTATGTTATGCTaGGATGCTGATCCTCTCACGGTTCCAGGTCACAGT +
Preference number: 3 (lower is better)
Translates to: SCSTLICQIMLC*DADPLTVPGHS
Trigger: ACTGTGACCTGGAACCGTGAGAGGATCAGCATCTCAGCATAACATAATTTGGCATATCAGTGTGCTGCAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509237.5
3UTR-3UTR CAA 90 bp TGTACCAGGTGCTTTGCATATATTGGTTTGGGATATATTGGTTCAGAGGAGACAGTCTCTAGGGCAAGCTaGCTCCAATGGGGAGTGTTA +
Preference number: 3 (lower is better)
Translates to: CTRCFAYIGLGYIGSEETVSRAS*LQWGVL
Trigger: TAACACTCCCCATTGGAGCAAGCTTGCCCTAGAGAC...TGTCTCCTCTGAACCAATATATCCCAAACCAATATATGCAAAGCACCTGGTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274276.8
3UTR GCA 72 bp AGGAGAACTGTTTGTTTGAATCTAGGAGGCGGAAGCTaGAGTGAGCTGAGATTGCACCAAAAGAACCAACAT +
Preference number: 3 (lower is better)
Translates to: RRTVCLNLGGGS*SELRLHQKNQH
Trigger: ATGTTGGTTCTTTTGGTGCAATCTCAGCTCACTGCAGCTTCCGCCTCCTAGATTCAAACAAACAGTTCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274276.8
3UTR TCA 72 bp AACTGTTTGTTTGAATCTAGGAGGCGGAAGCTGCAGTaGGCTGAGATTGCACCAAAAGAACCAACATGTACT +
Preference number: 3 (lower is better)
Translates to: NCLFESRRRKLQ*AEIAPKEPTCT
Trigger: AGTACATGTTGGTTCTTTTGGTGCAATCTCAGCTCACTGCAGCTTCCGCCTCCTAGATTCAAACAAACAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274276.8
3UTR CCA 72 bp TACCAGGTGCTTTGCATATATTGGTTTGGGATATATTaGTTCAGAGGAGACAAAGCTGCTCCAGAGCCAACA +
Preference number: 3 (lower is better)
Translates to: YQVLCIYWFGIY*FRGDKAAPEPT
Trigger: TGTTGGCTCTGGAGCAGCTTTGTCTCCTCTGAACCAATATATCCCAAACCAATATATGCAAAGCACCTGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274276.8
3UTR CCA 72 bp TCTGTGGTGAAAGTTGATGCCAGTTCTGATGATCTCTaGAAATGTTCATGGACTCTTTCCAGGTGCAAAGAC +
Preference number: 3 (lower is better)
Translates to: SVVKVDASSDDL*KCSWTLSRCKD
Trigger: GTCTTTGCACCTGGAAAGAGTCCATGAACATTTCCAGAGATCATCAGAACTGGCATCAACTTTCACCACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513831.1
3UTR-3UTR CAA 90 bp TATATTGGTTCAGAGGAGACAAAGCTGCTCCAGAGCCAACACGGAATTTCCCACTTCACTGTAGTAAGCTaGACAGAAGAATTGTGGAAA +
Preference number: 3 (lower is better)
Translates to: YIGSEETKLLQSQHGISHFTVVS*TEELWK
Trigger: TTTCCACAATTCTTCTGTCAAGCTTACTACAGTGAA...GTGGGAAATTCCGTGTTGGCTCTGGAGCAGCTTTGTCTCCTCTGAACCAATATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274276.8
3UTR-3UTR CAA 90 bp CTTTTCCACTGTGAACAGCCCTGTCCAGGCCCTTTGCATGCTGTAGTTATTTTCACATATGGCAACAGATaGAATGTAGAAGCAAGTATG +
Preference number: 3 (lower is better)
Translates to: LFHCEQPCPGPLHAVVIFTYGNR*NVEASM
Trigger: CATACTTGCTTCTACATTCAATCTGTTGCCATATGT...GAAAATAACTACAGCATGCAAAGGGCCTGGACAGGGCTGTTCACAGTGGAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509237.5
3UTR TCA 72 bp CCGCCCCCACCCACAGAGTTAATTTTACTGTGTCAGTaGACTATAGATTCTTATCCGTTCAAGGTAAGTCTA +
Preference number: 3 (lower is better)
Translates to: PPPPTELILLCQ*TIDSYPFKVSL
Trigger: TAGACTTACCTTGAACGGATAAGAATCTATAGTTCACTGACACAGTAAAATTAACTCTGTGGGTGGGGGCGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274276.8
3UTR TCA 72 bp GTATTGAAATTCTGGGTTTCCAGCCCAGCAACCAACTaGGTGCAATATGTAGTCATTCAGGTAAGTGATCAC +
Preference number: 3 (lower is better)
Translates to: VLKFWVSSPATN*VQYVVIQVSDH
Trigger: GTGATCACTTACCTGAATGACTACATATTGCACTCAGTTGGTTGCTGGGCTGGAAACCCAGAATTTCAATAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509237.5
3UTR-3UTR CAA 90 bp GAGCTGAGATTGCACCAAAAGAACCAACATGTACTAAAATACCAGTTGTGTACCAGTCTAAAATCTGTTTaGGCCTCAAACACCTGTGAG +
Preference number: 3 (lower is better)
Translates to: ELRLHQKNQHVLKYQLCTSLKSV*ASNTCE
Trigger: CTCACAGGTGTTTGAGGCCAAAACAGATTTTAGACT...GGTACACAACTGGTATTTTAGTACATGTTGGTTCTTTTGGTGCAATCTCAGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000274276.8
3UTR-3UTR CAA 90 bp TGTCTCAAGAAGGCTCAGCTGTGTGAGGCTAGATTTTCTTTAATACTTCAGCCAACATATGGCAACAGATaGAATGTAGAAGCAAGTATG +
Preference number: 3 (lower is better)
Translates to: CLKKAQLCEARFSLILQPTYGNR*NVEASM
Trigger: CATACTTGCTTCTACATTCAATCTGTTGCCATATGT...TGGCTGAAGTATTAAAGAAAATCTAGCCTCACACAGCTGAGCCTTCTTGAGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508882.1
3UTR-3UTR CAA 90 bp ATGACAGAAGTTATTGTTAGAGTCCTAGTTTTGAAGTTGGGTAGTAAGCTCATTCTACAGCACATTTACTaGATCACACAGTCTGTGAAA +
Preference number: 3 (lower is better)
Translates to: MTEVIVRVLVLKLGSKLILQHIY*ITQSVK
Trigger: TTTCACAGACTGTGTGATCAAGTAAATGTGCTGTAG...AATGAGCTTACTACCCAACTTCAAAACTAGGACTCTAACAATAACTTCTGTCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502536.5
3UTR GCA 72 bp AACCAACATGTACTAAAATACCAGTTGTGTACCAGGTaGTTTGCATATATTGGTTTGGGATATATTGGTTCA +
Preference number: 3 (lower is better)
Translates to: NQHVLKYQLCTR*FAYIGLGYIGS
Trigger: TGAACCAATATATCCCAAACCAATATATGCAAAGCACCTGGTACACAACTGGTATTTTAGTACATGTTGGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274276.8
3UTR CCA 72 bp TTTTCTTCAGACTTTCAAGATATTCCATATTCTGATTaGTGTGAGCAGACTATCCATAATCCTTTAGAAGTG +
Preference number: 3 (lower is better)
Translates to: FSSDFQDIPYSD*CEQTIHNPLEV
Trigger: CACTTCTAAAGGATTATGGATAGTCTGCTCACACCAATCAGAATATGGAATATCTTGAAAGTCTGAAGAAAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508882.1
CDS-3UTR GCA 90 bp GGAGGCTGGGGCAGGAGAACTGTTTGTTTGAATCTAGGAGGCGGAAGCTGCAGTCTGGGAGGCGGAGGTTaGAGTGAGCCAAGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: GGWGRRTVCLNLGGGSCSLGGGG*SEPRLH
Trigger: GTGCAGCCTTGGCTCACTGCAACCTCCGCCTCCCAG...ACTGCAGCTTCCGCCTCCTAGATTCAAACAAACAGTTCTCCTGCCCCAGCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR TCA 90 bp GGAGGCTGGGGCAGGAGAACTGTTTGTTTGAATCTAGGAGGCGGAAGCTGCAGTAGGCGGAGGTTGCAGTaGGCCAAGGCTGCACCATTG +
Preference number: 4 (lower is better)
Translates to: GGWGRRTVCLNLGGGSCSRRRLQ*AKAAPL
Trigger: CAATGGTGCAGCCTTGGCTCACTGCAACCTCCGCCT...ACTGCAGCTTCCGCCTCCTAGATTCAAACAAACAGTTCTCCTGCCCCAGCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR GCA 90 bp GGAGGCTGGGGCAGGAGAACTGTTTGTTTGAATCTAGGAGGCGGAAGCTGCAGTCCAGCCGGGATGGGCTaGGAAGTTGTCGGATTCTTT +
Preference number: 4 (lower is better)
Translates to: GGWGRRTVCLNLGGGSCSPAGMG*EVVGFF
Trigger: AAAGAATCCGACAACTTCGCAGCCCATCCCGGCTGG...ACTGCAGCTTCCGCCTCCTAGATTCAAACAAACAGTTCTCCTGCCCCAGCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR CCA 90 bp TATATTGGTTCAGAGGAGACAAAGCTGCTCCAGAGCCAACACGGAATTTCCCACCAGCCAAGCAAACGCTaGGCAGAGGCGGCACCGAGG +
Preference number: 4 (lower is better)
Translates to: YIGSEETKLLQSQHGISHQPSKR*AEAAPR
Trigger: CCTCGGTGCCGCCTCTGCCCAGCGTTTGCTTGGCTG...GTGGGAAATTCCGTGTTGGCTCTGGAGCAGCTTTGTCTCCTCTGAACCAATATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR CCA 90 bp GGAGGCTGGGGCAGGAGAACTGTTTGTTTGAATCTAGGAGGCGGAAGCTGCAGTTCACCGAGCACATCCTaGGTATGGTCACACCAGTCC +
Preference number: 4 (lower is better)
Translates to: GGWGRRTVCLNLGGGSCSSPSTS*VWSHQS
Trigger: GGACTGGTGTGACCATACCCAGGATGTGCTCGGTGA...ACTGCAGCTTCCGCCTCCTAGATTCAAACAAACAGTTCTCCTGCCCCAGCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274276.8
3UTR CAA 72 bp AGGTGCTCTGGAGGCTGGGGCAGGAGAACTGTTTGTTaGAATCTAGGAGGCGGAAGCTGCAGTGAGCTGAGA +
Preference number: 4 (lower is better)
Translates to: RCSGGWGRRTVC*NLGGGSCSELR
Trigger: TCTCAGCTCACTGCAGCTTCCGCCTCCTAGATTCAAACAAACAGTTCTCCTGCCCCAGCCTCCAGAGCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR GCA 90 bp TGCAAGGCATTGGGCACCAGAAGCATGAGCATAGGCAGAGCCATTTCCACCATGATTAGATTAGAGCTATaGCCCCCGCCCCCACCCACA +
Preference number: 4 (lower is better)
Translates to: CKALGTRSMSIGRAISTMIRLEL*PPPPPT
Trigger: TGTGGGTGGGGGCGGGGGGCATAGCTCTAATCTAAT...CATGGTGGAAATGGCTCTGCCTATGCTCATGCTTCTGGTGCCCAATGCCTTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR CCA 90 bp GGAGGCTGGGGCAGGAGAACTGTTTGTTTGAATCTAGGAGGCGGAAGCTGCAGTGGTTCCACTTCACAGTaGTGCTGTAATTCCCCACCC +
Preference number: 4 (lower is better)
Translates to: GGWGRRTVCLNLGGGSCSGSTSQ*CCNSPP
Trigger: GGGTGGGGAATTACAGCACCACTGTGAAGTGGAACC...ACTGCAGCTTCCGCCTCCTAGATTCAAACAAACAGTTCTCCTGCCCCAGCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274276.8
3UTR CAA 72 bp GCATGCTCCCATGATCCTGCCGTCTCTAGGGCAAGCTaGCTCCAATGGGGAGTGTTAAGTTCCATAGCCTCT +
Preference number: 4 (lower is better)
Translates to: ACSHDPAVSRAS*LQWGVLSSIAS
Trigger: AGAGGCTATGGAACTTAACACTCCCCATTGGAGCAAGCTTGCCCTAGAGACGGCAGGATCATGGGAGCATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR TCA 90 bp TATATTGGTTCAGAGGAGACAAAGCTGCTCCAGAGCCAACACGGAATTTCCCACGGCAGGAGAATTGCTTaGCCCTGGGAGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: YIGSEETKLLQSQHGISHGRRIA*PWEAEV
Trigger: AACCTCCGCCTCCCAGGGTCAAGCAATTCTCCTGCC...GTGGGAAATTCCGTGTTGGCTCTGGAGCAGCTTTGTCTCCTCTGAACCAATATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR TCA 90 bp CATGATCCTGCCGTCTCTAGGGCAAGCTTGCTCCAATGGGGAGTGTTAAGTTCCCCATTTCCACCATGCTaGCGGCAGGCAAGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: HDPAVSRASLLQWGVLSSPFPPC*RQARRR
Trigger: TCTTCTTCTTGCCTGCCGTCAGCATGGTGGAAATGG...GGAACTTAACACTCCCCATTGGAGCAAGCTTGCCCTAGAGACGGCAGGATCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR GCA 90 bp CATGATCCTGCCGTCTCTAGGGCAAGCTTGCTCCAATGGGGAGTGTTAAGTTCCAATCGTGGGTGGCACTaGCTCGCCTTGGATTTCAGA +
Preference number: 4 (lower is better)
Translates to: HDPAVSRASLLQWGVLSSNRGWH*LALDFR
Trigger: TCTGAAATCCAAGGCGAGGCAGTGCCACCCACGATT...GGAACTTAACACTCCCCATTGGAGCAAGCTTGCCCTAGAGACGGCAGGATCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR CCA 90 bp CATGATCCTGCCGTCTCTAGGGCAAGCTTGCTCCAATGGGGAGTGTTAAGTTCCCTCCATTTCCAGAAGTaGCTGGCATCAGCACACCGT +
Preference number: 4 (lower is better)
Translates to: HDPAVSRASLLQWGVLSSLHFQK*LASAHR
Trigger: ACGGTGTGCTGATGCCAGCCACTTCTGGAAATGGAG...GGAACTTAACACTCCCCATTGGAGCAAGCTTGCCCTAGAGACGGCAGGATCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR CCA 90 bp GGAGGCTGGGGCAGGAGAACTGTTTGTTTGAATCTAGGAGGCGGAAGCTGCAGTGGCACTGCCTCGCCTTaGATTTCAGATAGACATGGT +
Preference number: 4 (lower is better)
Translates to: GGWGRRTVCLNLGGGSCSGTASP*ISDRHG
Trigger: ACCATGTCTATCTGAAATCCAAGGCGAGGCAGTGCC...ACTGCAGCTTCCGCCTCCTAGATTCAAACAAACAGTTCTCCTGCCCCAGCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR CCA 90 bp CATGATCCTGCCGTCTCTAGGGCAAGCTTGCTCCAATGGGGAGTGTTAAGTTCCGGCTTTTGGGGATACTaGAACATGGCCACAAGAGCC +
Preference number: 4 (lower is better)
Translates to: HDPAVSRASLLQWGVLSSGFWGY*NMATRA
Trigger: GGCTCTTGTGGCCATGTTCCAGTATCCCCAAAAGCC...GGAACTTAACACTCCCCATTGGAGCAAGCTTGCCCTAGAGACGGCAGGATCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR TCA 90 bp GGAGGCTGGGGCAGGAGAACTGTTTGTTTGAATCTAGGAGGCGGAAGCTGCAGTCACTGTTGTTGGCTATaGCGCAGATTTGGTAGGAAC +
Preference number: 4 (lower is better)
Translates to: GGWGRRTVCLNLGGGSCSHCCWL*RRFGRN
Trigger: GTTCCTACCAAATCTGCGTCATAGCCAACAACAGTG...ACTGCAGCTTCCGCCTCCTAGATTCAAACAAACAGTTCTCCTGCCCCAGCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR TCA 90 bp TCTTGGCGGAAGGAGCGAAGGTGGGGGCGTTACAGGATGAGATATGACAGAAGTCTCTCACCTCCGCTGTaGATGAGGCAAAGATCTACA +
Preference number: 4 (lower is better)
Translates to: SWRKERRWGRYRMRYDRSLSPPL*MRQRST
Trigger: TGTAGATCTTTGCCTCATTCACAGCGGAGGTGAGAG...ACTTCTGTCATATCTCATCCTGTAACGCCCCCACCTTCGCTCCTTCCGCCAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502536.5
CDS-3UTR GCA 90 bp TGCAGTGAGCTGAGATTGCACCAAAAGAACCAACATGTACTAAAATACCAGTTGAGGGGAACGGGCTGCTaGACTCCCGGTCGCGTCCAG +
Preference number: 4 (lower is better)
Translates to: CSELRLHQKNQHVLKYQLRGTGC*TPGRVQ
Trigger: CTGGACGCGACCGGGAGTGCAGCAGCCCGTTCCCCT...CAACTGGTATTTTAGTACATGTTGGTTCTTTTGGTGCAATCTCAGCTCACTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR GCA 90 bp TGTACCAGGTGCTTTGCATATATTGGTTTGGGATATATTGGTTCAGAGGAGACAAGGAGGGGAACGGGCTaGTGCACTCCCGGTCGCGTC +
Preference number: 4 (lower is better)
Translates to: CTRCFAYIGLGYIGSEETRRGTG*CTPGRV
Trigger: GACGCGACCGGGAGTGCAGCAGCCCGTTCCCCTCCT...TGTCTCCTCTGAACCAATATATCCCAAACCAATATATGCAAAGCACCTGGTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR CCA 90 bp CATGATCCTGCCGTCTCTAGGGCAAGCTTGCTCCAATGGGGAGTGTTAAGTTCCGGTGCTGGAATGGAATaGAGCTCTGAACTGGATGGT +
Preference number: 4 (lower is better)
Translates to: HDPAVSRASLLQWGVLSSGAGME*SSELDG
Trigger: ACCATCCAGTTCAGAGCTCCATTCCATTCCAGCACC...GGAACTTAACACTCCCCATTGGAGCAAGCTTGCCCTAGAGACGGCAGGATCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR CCA 90 bp CATGATCCTGCCGTCTCTAGGGCAAGCTTGCTCCAATGGGGAGTGTTAAGTTCCAGCACATCCTGGGTATaGTCACACCAGTCCACAACA +
Preference number: 4 (lower is better)
Translates to: HDPAVSRASLLQWGVLSSSTSWV*SHQSTT
Trigger: TGTTGTGGACTGGTGTGACCATACCCAGGATGTGCT...GGAACTTAACACTCCCCATTGGAGCAAGCTTGCCCTAGAGACGGCAGGATCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR CCA 90 bp TGCAAGGCATTGGGCACCAGAAGCATGAGCATAGGCAGAGCCATTTCCACCATGTTTTCAAATCGTGGGTaGCACTGCCTCGCCTTGGAT +
Preference number: 4 (lower is better)
Translates to: CKALGTRSMSIGRAISTMFSNRG*HCLALD
Trigger: ATCCAAGGCGAGGCAGTGCCACCCACGATTTGAAAA...CATGGTGGAAATGGCTCTGCCTATGCTCATGCTTCTGGTGCCCAATGCCTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR CCA 90 bp CATGATCCTGCCGTCTCTAGGGCAAGCTTGCTCCAATGGGGAGTGTTAAGTTCCCCTTGTCTCCAAACATaGGTGAAGCCAACTGGGACA +
Preference number: 4 (lower is better)
Translates to: HDPAVSRASLLQWGVLSSPCLQT*VKPTGT
Trigger: TGTCCCAGTTGGCTTCACCCATGTTTGGAGACAAGG...GGAACTTAACACTCCCCATTGGAGCAAGCTTGCCCTAGAGACGGCAGGATCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR TCA 90 bp TATATTGGTTCAGAGGAGACAAAGCTGCTCCAGAGCCAACACGGAATTTCCCACGTATCCACCAGCACGTaGGGGTTGTCTGAAGGAGCA +
Preference number: 4 (lower is better)
Translates to: YIGSEETKLLQSQHGISHVSTST*GLSEGA
Trigger: TGCTCCTTCAGACAACCCTCACGTGCTGGTGGATAC...GTGGGAAATTCCGTGTTGGCTCTGGAGCAGCTTTGTCTCCTCTGAACCAATATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR TCA 90 bp ACAGAAGTTATTGTTAGAGTCCTAGTTTTGAAGTTGGGTAGTAAGCTCATTGGTCCCGGGCCGGGGCTATaGATCAGCTGCGGGGCAAGC +
Preference number: 4 (lower is better)
Translates to: TEVIVRVLVLKLGSKLIGPGPGL*ISCGAS
Trigger: GCTTGCCCCGCAGCTGATTCATAGCCCCGGCCCGGG...ACCAATGAGCTTACTACCCAACTTCAAAACTAGGACTCTAACAATAACTTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000502536.5
CDS-3UTR TCA 90 bp TTTCTGGATGCAGTGATGGGGTGTCTCAAGAAGGCTCAGCTGTGTGAGGCTAGAGATTTCTGGATGCAGTaGTGGGGTGTCTCAAGAAGG +
Preference number: 4 (lower is better)
Translates to: FLDAVMGCLKKAQLCEARDFWMQ*WGVSRR
Trigger: CCTTCTTGAGACACCCCATCACTGCATCCAGAAATC...TCTAGCCTCACACAGCTGAGCCTTCTTGAGACACCCCATCACTGCATCCAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508882.1
CDS-3UTR GCA 90 bp TCTTGGCGGAAGGAGCGAAGGTGGGGGCGTTACAGGATGAGATATGACAGAAGTGGATCCCAAGTACAGTaGAAAGTCTTGAAGTCCTCG +
Preference number: 4 (lower is better)
Translates to: SWRKERRWGRYRMRYDRSGSQVQ*KVLKSS
Trigger: CGAGGACTTCAAGACTTTGCACTGTACTTGGGATCC...ACTTCTGTCATATCTCATCCTGTAACGCCCCCACCTTCGCTCCTTCCGCCAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502536.5
CDS-3UTR GCA 90 bp GGAGGCTGGGGCAGGAGAACTGTTTGTTTGAATCTAGGAGGCGGAAGCTGCAGTAGAATCCACCCTCTGTaGCTGCAATTCTTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: GGWGRRTVCLNLGGGSCSRIHPL*LQFFLP
Trigger: AGGAAGAAAGAATTGCAGGCACAGAGGGTGGATTCT...ACTGCAGCTTCCGCCTCCTAGATTCAAACAAACAGTTCTCCTGCCCCAGCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR GCA 90 bp CATGATCCTGCCGTCTCTAGGGCAAGCTTGCTCCAATGGGGAGTGTTAAGTTCCGCCAGAGTCAGAAGCTaGCTGGTTATAGGTCAAGTT +
Preference number: 4 (lower is better)
Translates to: HDPAVSRASLLQWGVLSSARVRS*LVIGQV
Trigger: AACTTGACCTATAACCAGGCAGCTTCTGACTCTGGC...GGAACTTAACACTCCCCATTGGAGCAAGCTTGCCCTAGAGACGGCAGGATCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR GCA 90 bp TATATTGGTTCAGAGGAGACAAAGCTGCTCCAGAGCCAACACGGAATTTCCCACCTAGGAGGCGGAAGCTaGAGTGAGCTGAGATTGCAC +
Preference number: 4 (lower is better)
Translates to: YIGSEETKLLQSQHGISHLGGGS*SELRLH
Trigger: GTGCAATCTCAGCTCACTGCAGCTTCCGCCTCCTAG...GTGGGAAATTCCGTGTTGGCTCTGGAGCAGCTTTGTCTCCTCTGAACCAATATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR CCA 90 bp CATGATCCTGCCGTCTCTAGGGCAAGCTTGCTCCAATGGGGAGTGTTAAGTTCCCCTACATTCTTCCACTaGAAATCACCGAGCACATCC +
Preference number: 4 (lower is better)
Translates to: HDPAVSRASLLQWGVLSSPTFFH*KSPSTS
Trigger: GGATGTGCTCGGTGATTTCCAGTGGAAGAATGTAGG...GGAACTTAACACTCCCCATTGGAGCAAGCTTGCCCTAGAGACGGCAGGATCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR CCA 90 bp GGAGGCTGGGGCAGGAGAACTGTTTGTTTGAATCTAGGAGGCGGAAGCTGCAGTCTGTGCTTGTGGTATTaGGACCTACATTCTTCCACT +
Preference number: 4 (lower is better)
Translates to: GGWGRRTVCLNLGGGSCSLCLWY*DLHSST
Trigger: AGTGGAAGAATGTAGGTCCCAATACCACAAGCACAG...ACTGCAGCTTCCGCCTCCTAGATTCAAACAAACAGTTCTCCTGCCCCAGCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR CCA 90 bp GGAGGCTGGGGCAGGAGAACTGTTTGTTTGAATCTAGGAGGCGGAAGCTGCAGTGTCATATCGAACTCCTaGCCTAAAAGCATCTGTGCT +
Preference number: 4 (lower is better)
Translates to: GGWGRRTVCLNLGGGSCSVISNS*PKSICA
Trigger: AGCACAGATGCTTTTAGGCCAGGAGTTCGATATGAC...ACTGCAGCTTCCGCCTCCTAGATTCAAACAAACAGTTCTCCTGCCCCAGCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR CCA 90 bp TCCTCTCACGGTTCCAGGTCACAGTGGGGCCTGAGTCTGACAGATCCCTGGATTAGACGCAGAAAACCATaGGCAGTAGGATATGAATCA +
Preference number: 4 (lower is better)
Translates to: SSHGSRSQWGLSLTDPWIRRRKP*AVGYES
Trigger: TGATTCATATCCTACTGCCCATGGTTTTCTGCGTCT...AATCCAGGGATCTGTCAGACTCAGGCCCCACTGTGACCTGGAACCGTGAGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509237.5
CDS-3UTR TCA 90 bp GTTCTGATGATCTCTGGAAATGTTCATGGACTCTTTCCAGGTGCAAAGACTGACGACATCAGGGGCCTCTaGGGGAGCAGCTTCAAGTGT +
Preference number: 4 (lower is better)
Translates to: VLMISGNVHGLFPGAKTDDIRGL*GSSFKC
Trigger: ACACTTGAAGCTGCTCCCTCAGAGGCCCCTGATGTC...GTCAGTCTTTGCACCTGGAAAGAGTCCATGAACATTTCCAGAGATCATCAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513831.1
CDS-3UTR TCA 90 bp CATGATCCTGCCGTCTCTAGGGCAAGCTTGCTCCAATGGGGAGTGTTAAGTTCCAATAAGGTCACAGTATaGTTTCCTGGCTCCAAGCTC +
Preference number: 4 (lower is better)
Translates to: HDPAVSRASLLQWGVLSSNKVTV*FPGSKL
Trigger: GAGCTTGGAGCCAGGAAATCATACTGTGACCTTATT...GGAACTTAACACTCCCCATTGGAGCAAGCTTGCCCTAGAGACGGCAGGATCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR TCA 90 bp GGAGGCTGGGGCAGGAGAACTGTTTGTTTGAATCTAGGAGGCGGAAGCTGCAGTATGATGGCAGAATACTaGTGTCTATGGAGCAGAAGT +
Preference number: 4 (lower is better)
Translates to: GGWGRRTVCLNLGGGSCSMMAEY*CLWSRS
Trigger: ACTTCTGCTCCATAGACATCAGTATTCTGCCATCAT...ACTGCAGCTTCCGCCTCCTAGATTCAAACAAACAGTTCTCCTGCCCCAGCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR TCA 90 bp TGCAAGGCATTGGGCACCAGAAGCATGAGCATAGGCAGAGCCATTTCCACCATGCCGCTTTCTACTACGTaGGGAGCACATAATCAATGT +
Preference number: 4 (lower is better)
Translates to: CKALGTRSMSIGRAISTMPLSTT*GAHNQC
Trigger: ACATTGATTATGTGCTCCTCACGTAGTAGAAAGCGG...CATGGTGGAAATGGCTCTGCCTATGCTCATGCTTCTGGTGCCCAATGCCTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR TCA 90 bp TTGGCAGAGTCTGTGGTGAAAGTTGATGCCAGTTCTGATGATCTCTGGAAATGTTCCTTCTCCCCACACTaGGGGGACTGTCCCACTGAA +
Preference number: 4 (lower is better)
Translates to: LAESVVKVDASSDDLWKCSFSPH*GDCPTE
Trigger: TTCAGTGGGACAGTCCCCTCAGTGTGGGGAGAAGGA...ACATTTCCAGAGATCATCAGAACTGGCATCAACTTTCACCACAGACTCTGCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513831.1
CDS-3UTR TCA 90 bp GTTCTGATGATCTCTGGAAATGTTCATGGACTCTTTCCAGGTGCAAAGACTGACGTCCTGAGCCATGGCTaGAGTCTCCTTCTCCCCACA +
Preference number: 4 (lower is better)
Translates to: VLMISGNVHGLFPGAKTDVLSHG*SLLLPT
Trigger: TGTGGGGAGAAGGAGACTTCAGCCATGGCTCAGGAC...GTCAGTCTTTGCACCTGGAAAGAGTCCATGAACATTTCCAGAGATCATCAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513831.1
CDS-3UTR GCA 90 bp GGAGGCTGGGGCAGGAGAACTGTTTGTTTGAATCTAGGAGGCGGAAGCTGCAGTTTATTCCTTATGGAGTaGACCTTCCAGGTCATGATG +
Preference number: 4 (lower is better)
Translates to: GGWGRRTVCLNLGGGSCSLFLME*TFQVMM
Trigger: CATCATGACCTGGAAGGTGCACTCCATAAGGAATAA...ACTGCAGCTTCCGCCTCCTAGATTCAAACAAACAGTTCTCCTGCCCCAGCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR GCA 90 bp GAGCTGAGATTGCACCAAAAGAACCAACATGTACTAAAATACCAGTTGTGTACCACCTGGAGTCCTAGGTaGTCTGGAGGCTGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: ELRLHQKNQHVLKYQLCTTWSPR*SGGWGR
Trigger: CCTGCCCCAGCCTCCAGAGCACCTAGGACTCCAGGT...GGTACACAACTGGTATTTTAGTACATGTTGGTTCTTTTGGTGCAATCTCAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR CCA 90 bp TGTACCAGGTGCTTTGCATATATTGGTTTGGGATATATTGGTTCAGAGGAGACACGCGTCCAGCCGGGATaGGCTGCGAAGTTGTCGGAT +
Preference number: 4 (lower is better)
Translates to: CTRCFAYIGLGYIGSEETRVQPG*AAKLSD
Trigger: ATCCGACAACTTCGCAGCCCATCCCGGCTGGACGCG...TGTCTCCTCTGAACCAATATATCCCAAACCAATATATGCAAAGCACCTGGTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR CCA 90 bp TGCAAGGCATTGGGCACCAGAAGCATGAGCATAGGCAGAGCCATTTCCACCATGATAACATCTCCAGGTTaGGGTTTCCAAGACAGAGAG +
Preference number: 4 (lower is better)
Translates to: CKALGTRSMSIGRAISTMITSPG*GFQDRE
Trigger: CTCTCTGTCTTGGAAACCCCAACCTGGAGATGTTAT...CATGGTGGAAATGGCTCTGCCTATGCTCATGCTTCTGGTGCCCAATGCCTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR CCA 90 bp TATATTGGTTCAGAGGAGACAAAGCTGCTCCAGAGCCAACACGGAATTTCCCACTGCCTTTTCAAATCGTaGGTGGCACTGCCTCGCCTT +
Preference number: 4 (lower is better)
Translates to: YIGSEETKLLQSQHGISHCLFKS*VALPRL
Trigger: AAGGCGAGGCAGTGCCACCCACGATTTGAAAAGGCA...GTGGGAAATTCCGTGTTGGCTCTGGAGCAGCTTTGTCTCCTCTGAACCAATATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR CCA 90 bp TGCAAGGCATTGGGCACCAGAAGCATGAGCATAGGCAGAGCCATTTCCACCATGGCAAGCTTGCTCCAATaGGGAGTGTTAAGTTCCATA +
Preference number: 4 (lower is better)
Translates to: CKALGTRSMSIGRAISTMASLLQ*GVLSSI
Trigger: TATGGAACTTAACACTCCCCATTGGAGCAAGCTTGC...CATGGTGGAAATGGCTCTGCCTATGCTCATGCTTCTGGTGCCCAATGCCTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR CCA 90 bp GGAGGCTGGGGCAGGAGAACTGTTTGTTTGAATCTAGGAGGCGGAAGCTGCAGTTGGGAGTCTGTAGAGTaGTTAATGCATATCCTTAGG +
Preference number: 4 (lower is better)
Translates to: GGWGRRTVCLNLGGGSCSWESVE*LMHILR
Trigger: CCTAAGGATATGCATTAACCACTCTACAGACTCCCA...ACTGCAGCTTCCGCCTCCTAGATTCAAACAAACAGTTCTCCTGCCCCAGCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR TCA 90 bp TGCAAGGCATTGGGCACCAGAAGCATGAGCATAGGCAGAGCCATTTCCACCATGCTCCTCAAGTACTTTTaGGACAAAAAGAACGATGCC +
Preference number: 4 (lower is better)
Translates to: CKALGTRSMSIGRAISTMLLKYF*DKKNDA
Trigger: GGCATCGTTCTTTTTGTCTCAAAAGTACTTGAGGAG...CATGGTGGAAATGGCTCTGCCTATGCTCATGCTTCTGGTGCCCAATGCCTTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR TCA 90 bp TGCAAGGCATTGGGCACCAGAAGCATGAGCATAGGCAGAGCCATTTCCACCATGACTCACCGTTCACCTTaGTGGAAACATTGTATTGCA +
Preference number: 4 (lower is better)
Translates to: CKALGTRSMSIGRAISTMTHRSP*WKHCIA
Trigger: TGCAATACAATGTTTCCATCAAGGTGAACGGTGAGT...CATGGTGGAAATGGCTCTGCCTATGCTCATGCTTCTGGTGCCCAATGCCTTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR TCA 90 bp TGCAAGGCATTGGGCACCAGAAGCATGAGCATAGGCAGAGCCATTTCCACCATGGATAACAGGTCTCCTTaGTCCACTGACTTTTCAAGT +
Preference number: 4 (lower is better)
Translates to: CKALGTRSMSIGRAISTMDNRSP*STDFSS
Trigger: ACTTGAAAAGTCAGTGGATCAAGGAGACCTGTTATC...CATGGTGGAAATGGCTCTGCCTATGCTCATGCTTCTGGTGCCCAATGCCTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR TCA 90 bp TATATTGGTTCAGAGGAGACAAAGCTGCTCCAGAGCCAACACGGAATTTCCCACGTCTCCAAACATGGGTaGAGCCAACTGGGACACATA +
Preference number: 4 (lower is better)
Translates to: YIGSEETKLLQSQHGISHVSKHG*SQLGHI
Trigger: TATGTGTCCCAGTTGGCTTCACCCATGTTTGGAGAC...GTGGGAAATTCCGTGTTGGCTCTGGAGCAGCTTTGTCTCCTCTGAACCAATATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR TCA 90 bp TATATTGGTTCAGAGGAGACAAAGCTGCTCCAGAGCCAACACGGAATTTCCCACGAAGCTGCAGTGAGCTaGGATTGCACCAAAAGAACC +
Preference number: 4 (lower is better)
Translates to: YIGSEETKLLQSQHGISHEAAVS*DCTKRT
Trigger: GGTTCTTTTGGTGCAATCTCAGCTCACTGCAGCTTC...GTGGGAAATTCCGTGTTGGCTCTGGAGCAGCTTTGTCTCCTCTGAACCAATATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR TCA 90 bp GGGGATGCGTGCATCCATGAGGAGAAACGTGGCATGAACAATAGGTATAAATTCGGATGCGTGCATCCATaGGGAGAAACGTGGCATGAA +
Preference number: 4 (lower is better)
Translates to: GDACIHEEKRGMNNRYKFGCVHP*GETWHE
Trigger: TTCATGCCACGTTTCTCCTCATGGATGCACGCATCC...GAATTTATACCTATTGTTCATGCCACGTTTCTCCTCATGGATGCACGCATCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502536.5
CDS-3UTR GCA 90 bp GGAGGCTGGGGCAGGAGAACTGTTTGTTTGAATCTAGGAGGCGGAAGCTGCAGTAGGGAGACTGCCATTTaGATTTTATACTCTGAACAG +
Preference number: 4 (lower is better)
Translates to: GGWGRRTVCLNLGGGSCSRETAI*ILYSEQ
Trigger: CTGTTCAGAGTATAAAATGCAAATGGCAGTCTCCCT...ACTGCAGCTTCCGCCTCCTAGATTCAAACAAACAGTTCTCCTGCCCCAGCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR GCA 90 bp CATGATCCTGCCGTCTCTAGGGCAAGCTTGCTCCAATGGGGAGTGTTAAGTTCCAAGACGCAGGGAGACTaGCATTTGCATTTTATACTC +
Preference number: 4 (lower is better)
Translates to: HDPAVSRASLLQWGVLSSKTQGD*HLHFIL
Trigger: GAGTATAAAATGCAAATGGCAGTCTCCCTGCGTCTT...GGAACTTAACACTCCCCATTGGAGCAAGCTTGCCCTAGAGACGGCAGGATCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR CCA 90 bp TGCAAGGCATTGGGCACCAGAAGCATGAGCATAGGCAGAGCCATTTCCACCATGCACAAGAAAAGTCCTTaGGCTCCTCAAGTACTTTTG +
Preference number: 4 (lower is better)
Translates to: CKALGTRSMSIGRAISTMHKKSP*APQVLL
Trigger: CAAAAGTACTTGAGGAGCCCAAGGACTTTTCTTGTG...CATGGTGGAAATGGCTCTGCCTATGCTCATGCTTCTGGTGCCCAATGCCTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR CCA 90 bp TATATTGGTTCAGAGGAGACAAAGCTGCTCCAGAGCCAACACGGAATTTCCCACCATACTTGGGGCTTTTaGGGATACTGGAACATGGCC +
Preference number: 4 (lower is better)
Translates to: YIGSEETKLLQSQHGISHHTWGF*GYWNMA
Trigger: GGCCATGTTCCAGTATCCCCAAAAGCCCCAAGTATG...GTGGGAAATTCCGTGTTGGCTCTGGAGCAGCTTTGTCTCCTCTGAACCAATATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR TCA 90 bp CATGATCCTGCCGTCTCTAGGGCAAGCTTGCTCCAATGGGGAGTGTTAAGTTCCGCACACTATTCAAGTTaGATGCAGTTACATGTGGAT +
Preference number: 4 (lower is better)
Translates to: HDPAVSRASLLQWGVLSSAHYSS*MQLHVD
Trigger: ATCCACATGTAACTGCATTCAACTTGAATAGTGTGC...GGAACTTAACACTCCCCATTGGAGCAAGCTTGCCCTAGAGACGGCAGGATCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR TCA 90 bp TATATTGGTTCAGAGGAGACAAAGCTGCTCCAGAGCCAACACGGAATTTCCCACGCACCTTCCAGGTCATaGTGGCATTTGTGGCATTTA +
Preference number: 4 (lower is better)
Translates to: YIGSEETKLLQSQHGISHAPSRS*WHLWHL
Trigger: TAAATGCCACAAATGCCATCATGACCTGGAAGGTGC...GTGGGAAATTCCGTGTTGGCTCTGGAGCAGCTTTGTCTCCTCTGAACCAATATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR TCA 90 bp TGCAGTGAGCTGAGATTGCACCAAAAGAACCAACATGTACTAAAATACCAGTTGGACATCAGGGGCCTCTaGGGGAGCAGCTTCAAGTGT +
Preference number: 4 (lower is better)
Translates to: CSELRLHQKNQHVLKYQLDIRGL*GSSFKC
Trigger: ACACTTGAAGCTGCTCCCTCAGAGGCCCCTGATGTC...CAACTGGTATTTTAGTACATGTTGGTTCTTTTGGTGCAATCTCAGCTCACTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR TCA 90 bp TATATTGGTTCAGAGGAGACAAAGCTGCTCCAGAGCCAACACGGAATTTCCCACATGGGCAGTAGGATATaGATCAGCATCGAGGAGTGT +
Preference number: 4 (lower is better)
Translates to: YIGSEETKLLQSQHGISHMGSRI*ISIEEC
Trigger: ACACTCCTCGATGCTGATTCATATCCTACTGCCCAT...GTGGGAAATTCCGTGTTGGCTCTGGAGCAGCTTTGTCTCCTCTGAACCAATATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR TCA 90 bp GAGCTGAGATTGCACCAAAAGAACCAACATGTACTAAAATACCAGTTGTGTACCGGCAGGCAGATCACCTaGGGTCAGGAGTTCGAGAAC +
Preference number: 4 (lower is better)
Translates to: ELRLHQKNQHVLKYQLCTGRQIT*GQEFEN
Trigger: GTTCTCGAACTCCTGACCTCAGGTGATCTGCCTGCC...GGTACACAACTGGTATTTTAGTACATGTTGGTTCTTTTGGTGCAATCTCAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR TCA 90 bp GTTATTGTTAGAGTCCTAGTTTTGAAGTTGGGTAGTAAGCTCATTGGTGCTCGTGGGAGGGCAGAGGGGTaGGGTCTTTTGCAATTTCCC +
Preference number: 4 (lower is better)
Translates to: VIVRVLVLKLGSKLIGARGRAEG*GLLQFP
Trigger: GGGAAATTGCAAAAGACCTCACCCCTCTGCCCTCCC...ACGAGCACCAATGAGCTTACTACCCAACTTCAAAACTAGGACTCTAACAATAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000502536.5
CDS-3UTR TCA 90 bp CTTTTCCACTGTGAACAGCCCTGTCCAGGCCCTTTGCATGCTGTAGTTATTTTCAGTCATTCAGGTAAGTaGTCACGTCCCACCTTCAGA +
Preference number: 4 (lower is better)
Translates to: LFHCEQPCPGPLHAVVIFSHSGK*SRPTFR
Trigger: TCTGAAGGTGGGACGTGATCACTTACCTGAATGACT...GAAAATAACTACAGCATGCAAAGGGCCTGGACAGGGCTGTTCACAGTGGAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509237.5
CDS-3UTR TCA 90 bp CTGATGATCTCTGGAAATGTTCATGGACTCTTTCCAGGTGCAAAGACTGACAACAGGGGACTGTCCCACTaGAACACGTTGACACACTGT +
Preference number: 4 (lower is better)
Translates to: LMISGNVHGLFPGAKTDNRGLSH*NTLTHC
Trigger: ACAGTGTGTCAACGTGTTTCAGTGGGACAGTCCCCT...GTTGTCAGTCTTTGCACCTGGAAAGAGTCCATGAACATTTCCAGAGATCATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513831.1
CDS-3UTR TCA 90 bp GCAGAGTCTGTGGTGAAAGTTGATGCCAGTTCTGATGATCTCTGGAAATGTTCATGGACAGAAATGTCCTaGGCCATGGCTGAAGTCTCC +
Preference number: 4 (lower is better)
Translates to: AESVVKVDASSDDLWKCSWTEMS*AMAEVS
Trigger: GGAGACTTCAGCCATGGCTCAGGACATTTCTGTCCA...TGAACATTTCCAGAGATCATCAGAACTGGCATCAACTTTCACCACAGACTCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513831.1
CDS-3UTR GCA 90 bp GGGGATGCGTGCATCCATGAGGAGAAACGTGGCATGAACAATAGGTATAAATTCTCCACTTCACAGTGGTaGTGTAATTCCCCACCCAGA +
Preference number: 4 (lower is better)
Translates to: GDACIHEEKRGMNNRYKFSTSQW*CNSPPR
Trigger: TCTGGGTGGGGAATTACAGCACCACTGTGAAGTGGA...GAATTTATACCTATTGTTCATGCCACGTTTCTCCTCATGGATGCACGCATCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502536.5
CDS-3UTR GCA 90 bp GGGGATGCGTGCATCCATGAGGAGAAACGTGGCATGAACAATAGGTATAAATTCGATTCCCAGCTCCAATaGAGAACCTGGTTCCACTTC +
Preference number: 4 (lower is better)
Translates to: GDACIHEEKRGMNNRYKFDSQLQ*RTWFHF
Trigger: GAAGTGGAACCAGGTTCTGCATTGGAGCTGGGAATC...GAATTTATACCTATTGTTCATGCCACGTTTCTCCTCATGGATGCACGCATCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502536.5
CDS-3UTR GCA 90 bp TATATTGGTTCAGAGGAGACAAAGCTGCTCCAGAGCCAACACGGAATTTCCCACGGATCCCAAGTACAGTaGAAAGTCTTGAAGTCCTCG +
Preference number: 4 (lower is better)
Translates to: YIGSEETKLLQSQHGISHGSQVQ*KVLKSS
Trigger: CGAGGACTTCAAGACTTTGCACTGTACTTGGGATCC...GTGGGAAATTCCGTGTTGGCTCTGGAGCAGCTTTGTCTCCTCTGAACCAATATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR GCA 90 bp CATGATCCTGCCGTCTCTAGGGCAAGCTTGCTCCAATGGGGAGTGTTAAGTTCCTTTGTTTTCGGGGTCTaGAGAGATGACTATTACAGA +
Preference number: 4 (lower is better)
Translates to: HDPAVSRASLLQWGVLSSFVFGV*RDDYYR
Trigger: TCTGTAATAGTCATCTCTGCAGACCCCGAAAACAAA...GGAACTTAACACTCCCCATTGGAGCAAGCTTGCCCTAGAGACGGCAGGATCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR GCA 90 bp GAGCTGAGATTGCACCAAAAGAACCAACATGTACTAAAATACCAGTTGTGTACCGCAGTGAGCCAAGGCTaGACCATTGCACTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: ELRLHQKNQHVLKYQLCTAVSQG*TIALQP
Trigger: AGGCTGGAGTGCAATGGTGCAGCCTTGGCTCACTGC...GGTACACAACTGGTATTTTAGTACATGTTGGTTCTTTTGGTGCAATCTCAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR GCA 90 bp TGCAGTGAGCTGAGATTGCACCAAAAGAACCAACATGTACTAAAATACCAGTTGCTGAGGCAGGAGAATTaGTTGACCCTGGGAGGCGGA +
Preference number: 4 (lower is better)
Translates to: CSELRLHQKNQHVLKYQLLRQEN*LTLGGG
Trigger: TCCGCCTCCCAGGGTCAAGCAATTCTCCTGCCTCAG...CAACTGGTATTTTAGTACATGTTGGTTCTTTTGGTGCAATCTCAGCTCACTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR GCA 90 bp GGGGATGCGTGCATCCATGAGGAGAAACGTGGCATGAACAATAGGTATAAATTCAGGGGTGAGGTCTTTTaGAATTTCCCGTCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: GDACIHEEKRGMNNRYKFRGEVF*NFPSCC
Trigger: GCAGCAAGACGGGAAATTGCAAAAGACCTCACCCCT...GAATTTATACCTATTGTTCATGCCACGTTTCTCCTCATGGATGCACGCATCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000502536.5
CDS-3UTR CCA 90 bp TTGATGCCAGTTCTGATGATCTCTGGAAATGTTCATGGACTCTTTCCAGGTGCACTCCATTTCCAGAAGTaGCTGGCATCAGCACACCGT +
Preference number: 4 (lower is better)
Translates to: LMPVLMISGNVHGLFPGALHFQK*LASAHR
Trigger: ACGGTGTGCTGATGCCAGCCACTTCTGGAAATGGAG...TGCACCTGGAAAGAGTCCATGAACATTTCCAGAGATCATCAGAACTGGCATCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513831.1
CDS-3UTR CCA 90 bp GGAGGCTGGGGCAGGAGAACTGTTTGTTTGAATCTAGGAGGCGGAAGCTGCAGTAACTTCAATAGCATCTaGGATACAGTCACTGACATT +
Preference number: 4 (lower is better)
Translates to: GGWGRRTVCLNLGGGSCSNFNSI*DTVTDI
Trigger: AATGTCAGTGACTGTATCCCAGATGCTATTGAAGTT...ACTGCAGCTTCCGCCTCCTAGATTCAAACAAACAGTTCTCCTGCCCCAGCCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR CCA 90 bp AGAGTCCTAGTTTTGAAGTTGGGTAGTAAGCTCATTGGTGCTCGTGACATTATTCGGAAGGAGCGAAGGTaGGGGCGTTACAGGATGAGA +
Preference number: 4 (lower is better)
Translates to: RVLVLKLGSKLIGARDIIRKERR*GRYRMR
Trigger: TCTCATCCTGTAACGCCCCCACCTTCGCTCCTTCCG...AATAATGTCACGAGCACCAATGAGCTTACTACCCAACTTCAAAACTAGGACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502536.5
CDS-3UTR TCA 90 bp TGCAAGGCATTGGGCACCAGAAGCATGAGCATAGGCAGAGCCATTTCCACCATGATGTTTCAATCCTACTaGTCTGGATCTGAAATACCA +
Preference number: 4 (lower is better)
Translates to: CKALGTRSMSIGRAISTMMFQSY*SGSEIP
Trigger: TGGTATTTCAGATCCAGATCAGTAGGATTGAAACAT...CATGGTGGAAATGGCTCTGCCTATGCTCATGCTTCTGGTGCCCAATGCCTTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR TCA 90 bp TATATTGGTTCAGAGGAGACAAAGCTGCTCCAGAGCCAACACGGAATTTCCCACTACAGTGCAAAGTCTTaGAGTCCTCGGTTTCACAAG +
Preference number: 4 (lower is better)
Translates to: YIGSEETKLLQSQHGISHYSAKS*SPRFHK
Trigger: CTTGTGAAACCGAGGACTTCAAGACTTTGCACTGTA...GTGGGAAATTCCGTGTTGGCTCTGGAGCAGCTTTGTCTCCTCTGAACCAATATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR TCA 90 bp TGCAAGGCATTGGGCACCAGAAGCATGAGCATAGGCAGAGCCATTTCCACCATGGTTTCTTGTGAGTCTTaGGTTATTTGCCAATTACAC +
Preference number: 4 (lower is better)
Translates to: CKALGTRSMSIGRAISTMVSCES*VICQLH
Trigger: GTGTAATTGGCAAATAACTCAAGACTCACAAGAAAC...CATGGTGGAAATGGCTCTGCCTATGCTCATGCTTCTGGTGCCCAATGCCTTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR TCA 90 bp TGCAAGGCATTGGGCACCAGAAGCATGAGCATAGGCAGAGCCATTTCCACCATGATAACCCATAAATTCTaGAGTCATATCGAACTCCTG +
Preference number: 4 (lower is better)
Translates to: CKALGTRSMSIGRAISTMITHKF*SHIELL
Trigger: CAGGAGTTCGATATGACTTCAGAATTTATGGGTTAT...CATGGTGGAAATGGCTCTGCCTATGCTCATGCTTCTGGTGCCCAATGCCTTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR TCA 90 bp TGCAAGGCATTGGGCACCAGAAGCATGAGCATAGGCAGAGCCATTTCCACCATGCTGGGATACAGTCACTaGCATTCATTATTATTAGGT +
Preference number: 4 (lower is better)
Translates to: CKALGTRSMSIGRAISTMLGYSH*HSLLLG
Trigger: ACCTAATAATAATGAATGTCAGTGACTGTATCCCAG...CATGGTGGAAATGGCTCTGCCTATGCTCATGCTTCTGGTGCCCAATGCCTTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR TCA 90 bp AAATTATGTTATGCTGAGATGCTGATCCTCTCACGGTTCCAGGTCACAGTGGGGAGCCCAGCAACCAACTaGGTGCAATATGTAGTCATT +
Preference number: 4 (lower is better)
Translates to: KLCYAEMLILSRFQVTVGSPATN*VQYVVI
Trigger: AATGACTACATATTGCACTCAGTTGGTTGCTGGGCT...CCCCACTGTGACCTGGAACCGTGAGAGGATCAGCATCTCAGCATAACATAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509237.5
CDS-3UTR GCA 90 bp TATATTGGTTCAGAGGAGACAAAGCTGCTCCAGAGCCAACACGGAATTTCCCACGTTGTCCACAATCAATaGCTTTTCTTCCGGGTTGTC +
Preference number: 4 (lower is better)
Translates to: YIGSEETKLLQSQHGISHVVHNQ*LFFRVV
Trigger: GACAACCCGGAAGAAAAGGCATTGATTGTGGACAAC...GTGGGAAATTCCGTGTTGGCTCTGGAGCAGCTTTGTCTCCTCTGAACCAATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR GCA 90 bp TATATTGGTTCAGAGGAGACAAAGCTGCTCCAGAGCCAACACGGAATTTCCCACTTAATGACAGGATGCTaGTCTTGTAAGGGTCAGGGA +
Preference number: 4 (lower is better)
Translates to: YIGSEETKLLQSQHGISHLMTGC*SCKGQG
Trigger: TCCCTGACCCTTACAAGAGCAGCATCCTGTCATTAA...GTGGGAAATTCCGTGTTGGCTCTGGAGCAGCTTTGTCTCCTCTGAACCAATATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR GCA 90 bp TTTCTGGATGCAGTGATGGGGTGTCTCAAGAAGGCTCAGCTGTGTGAGGCTAGATTATTAATGACAGGATaGTGCTCTTGTAAGGGTCAG +
Preference number: 4 (lower is better)
Translates to: FLDAVMGCLKKAQLCEARLLMTG*CSCKGQ
Trigger: CTGACCCTTACAAGAGCAGCATCCTGTCATTAATAA...TCTAGCCTCACACAGCTGAGCCTTCTTGAGACACCCCATCACTGCATCCAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508882.1
CDS-3UTR GCA 90 bp TACACACGCACACAATTTAAAGTGATAATTATCTTGGCGGAAGGAGCGAAGGTGAATTTCCCGTCTTGCTaGGCACTCTTGGCACTCCTG +
Preference number: 4 (lower is better)
Translates to: YTRTQFKVIIILAEGAKVNFPSC*ALLALL
Trigger: CAGGAGTGCCAAGAGTGCGCAGCAAGACGGGAAATT...CACCTTCGCTCCTTCCGCCAAGATAATTATCACTTTAAATTGTGTGCGTGTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502536.5
CDS-3UTR CCA 90 bp TACACACGCACACAATTTAAAGTGATAATTATCTTGGCGGAAGGAGCGAAGGTGGGTTCCACTTCACAGTaGTGCTGTAATTCCCCACCC +
Preference number: 4 (lower is better)
Translates to: YTRTQFKVIIILAEGAKVGSTSQ*CCNSPP
Trigger: GGGTGGGGAATTACAGCACCACTGTGAAGTGGAACC...CACCTTCGCTCCTTCCGCCAAGATAATTATCACTTTAAATTGTGTGCGTGTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502536.5
CDS-3UTR CCA 90 bp TTGATGCCAGTTCTGATGATCTCTGGAAATGTTCATGGACTCTTTCCAGGTGCAATTTCCAGAAGTGGCTaGCATCAGCACACCGTACTC +
Preference number: 4 (lower is better)
Translates to: LMPVLMISGNVHGLFPGAISRSG*HQHTVL
Trigger: GAGTACGGTGTGCTGATGCCAGCCACTTCTGGAAAT...TGCACCTGGAAAGAGTCCATGAACATTTCCAGAGATCATCAGAACTGGCATCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513831.1
CDS-3UTR CCA 90 bp CTGATGATCTCTGGAAATGTTCATGGACTCTTTCCAGGTGCAAAGACTGACAACGGTGCTGGAATGGAATaGAGCTCTGAACTGGATGGT +
Preference number: 4 (lower is better)
Translates to: LMISGNVHGLFPGAKTDNGAGME*SSELDG
Trigger: ACCATCCAGTTCAGAGCTCCATTCCATTCCAGCACC...GTTGTCAGTCTTTGCACCTGGAAAGAGTCCATGAACATTTCCAGAGATCATCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513831.1
CDS-3UTR CCA 90 bp TGCAAGGCATTGGGCACCAGAAGCATGAGCATAGGCAGAGCCATTTCCACCATGACCAGCACTAGTGAATaGAGTGATGAAAAACTCATA +
Preference number: 4 (lower is better)
Translates to: CKALGTRSMSIGRAISTMTSTSE*SDEKLI
Trigger: TATGAGTTTTTCATCACTCCATTCACTAGTGCTGGT...CATGGTGGAAATGGCTCTGCCTATGCTCATGCTTCTGGTGCCCAATGCCTTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR CCA 90 bp ACAGAAGTTATTGTTAGAGTCCTAGTTTTGAAGTTGGGTAGTAAGCTCATTGGTCTTGCTGCGCACTCTTaGCACTCCTGGGACCCACAG +
Preference number: 4 (lower is better)
Translates to: TEVIVRVLVLKLGSKLIGLAAHS*HSWDPQ
Trigger: CTGTGGGTCCCAGGAGTGCCAAGAGTGCGCAGCAAG...ACCAATGAGCTTACTACCCAACTTCAAAACTAGGACTCTAACAATAACTTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502536.5
CDS-3UTR CCA 90 bp GATGCCAGTTCTGATGATCTCTGGAAATGTTCATGGACTCTTTCCAGGTGCAAAAAATGTCCTGAGCCATaGCTGAAGTCTCCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: DASSDDLWKCSWTLSRCKKCPEP*LKSPSP
Trigger: GGGAGAAGGAGACTTCAGCCATGGCTCAGGACATTT...TTTGCACCTGGAAAGAGTCCATGAACATTTCCAGAGATCATCAGAACTGGCATC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000513831.1
CDS-3UTR TCA 90 bp GCAGAGTCTGTGGTGAAAGTTGATGCCAGTTCTGATGATCTCTGGAAATGTTCACAGCTTCAAGTGTGGTaGAGTTCTGACCACTCCATT +
Preference number: 4 (lower is better)
Translates to: AESVVKVDASSDDLWKCSQLQVW*SSDHSI
Trigger: AATGGAGTGGTCAGAACTTCACCACACTTGAAGCTG...TGAACATTTCCAGAGATCATCAGAACTGGCATCAACTTTCACCACAGACTCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513831.1
CDS-3UTR TCA 90 bp TTGGCAGAGTCTGTGGTGAAAGTTGATGCCAGTTCTGATGATCTCTGGAAATGTCACTGTTGTTGGCTATaGCGCAGATTTGGTAGGAAC +
Preference number: 4 (lower is better)
Translates to: LAESVVKVDASSDDLWKCHCCWL*RRFGRN
Trigger: GTTCCTACCAAATCTGCGTCATAGCCAACAACAGTG...ACATTTCCAGAGATCATCAGAACTGGCATCAACTTTCACCACAGACTCTGCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513831.1
CDS-3UTR TCA 90 bp GAGCTGAGATTGCACCAAAAGAACCAACATGTACTAAAATACCAGTTGTGTACCCACGTGAGGGTTGTCTaGAGGAGCAAGTTCCTGAGA +
Preference number: 4 (lower is better)
Translates to: ELRLHQKNQHVLKYQLCTHVRVV*RSKFLR
Trigger: TCTCAGGAACTTGCTCCTTCAGACAACCCTCACGTG...GGTACACAACTGGTATTTTAGTACATGTTGGTTCTTTTGGTGCAATCTCAGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR TCA 90 bp TATATTGGTTCAGAGGAGACAAAGCTGCTCCAGAGCCAACACGGAATTTCCCACTTGCATTTTATACTCTaGACAGTGTGGTGCCTCTAC +
Preference number: 4 (lower is better)
Translates to: YIGSEETKLLQSQHGISHLHFIL*TVWCLY
Trigger: GTAGAGGCACCACACTGTTCAGAGTATAAAATGCAA...GTGGGAAATTCCGTGTTGGCTCTGGAGCAGCTTTGTCTCCTCTGAACCAATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR TCA 90 bp GAGCTGAGATTGCACCAAAAGAACCAACATGTACTAAAATACCAGTTGTGTACCCACCCTGTACAGTACTaGGTGGGAGTCTGTAGAGTG +
Preference number: 4 (lower is better)
Translates to: ELRLHQKNQHVLKYQLCTHPVQY*VGVCRV
Trigger: CACTCTACAGACTCCCACTCAGTACTGTACAGGGTG...GGTACACAACTGGTATTTTAGTACATGTTGGTTCTTTTGGTGCAATCTCAGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR TCA 90 bp TTGATGCCAGTTCTGATGATCTCTGGAAATGTTCATGGACTCTTTCCAGGTGCATCCAACTCTCAGTGGTaGCTGTTTGTTAGGGTTGCA +
Preference number: 4 (lower is better)
Translates to: LMPVLMISGNVHGLFPGASNSQW*LFVRVA
Trigger: TGCAACCCTAACAAACAGTCACCACTGAGAGTTGGA...TGCACCTGGAAAGAGTCCATGAACATTTCCAGAGATCATCAGAACTGGCATCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513831.1
CDS-3UTR GCA 90 bp GGTGCTTTGCATATATTGGTTTGGGATATATTGGTTCAGAGGAGACAAAGCTGCTCCACTTCACAGTGGTaGTGTAATTCCCCACCCAGA +
Preference number: 4 (lower is better)
Translates to: GALHILVWDILVQRRQSCSTSQW*CNSPPR
Trigger: TCTGGGTGGGGAATTACAGCACCACTGTGAAGTGGA...GCAGCTTTGTCTCCTCTGAACCAATATATCCCAAACCAATATATGCAAAGCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR GCA 90 bp GGTGCTTTGCATATATTGGTTTGGGATATATTGGTTCAGAGGAGACAAAGCTGCGATTCCCAGCTCCAATaGAGAACCTGGTTCCACTTC +
Preference number: 4 (lower is better)
Translates to: GALHILVWDILVQRRQSCDSQLQ*RTWFHF
Trigger: GAAGTGGAACCAGGTTCTGCATTGGAGCTGGGAATC...GCAGCTTTGTCTCCTCTGAACCAATATATCCCAAACCAATATATGCAAAGCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR GCA 90 bp AGAGTCCTAGTTTTGAAGTTGGGTAGTAAGCTCATTGGTGCTCGTGACATTATTTGCAATTTCCCGTCTTaGTGCGCACTCTTGGCACTC +
Preference number: 4 (lower is better)
Translates to: RVLVLKLGSKLIGARDIICNFPS*CALLAL
Trigger: GAGTGCCAAGAGTGCGCAGCAAGACGGGAAATTGCA...AATAATGTCACGAGCACCAATGAGCTTACTACCCAACTTCAAAACTAGGACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502536.5
CDS-3UTR GCA 90 bp TGTCTCAAGAAGGCTCAGCTGTGTGAGGCTAGATTTTCTTTAATACTTCAGCCATCGGGGATTTCTGGATaGAGTGATGGGGTGTCTCAA +
Preference number: 4 (lower is better)
Translates to: CLKKAQLCEARFSLILQPSGISG*SDGVSQ
Trigger: TTGAGACACCCCATCACTGCATCCAGAAATCCCCGA...TGGCTGAAGTATTAAAGAAAATCTAGCCTCACACAGCTGAGCCTTCTTGAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000508882.1
CDS-3UTR CCA 90 bp GGTGCTTTGCATATATTGGTTTGGGATATATTGGTTCAGAGGAGACAAAGCTGCATTTCCAGAAGTGGCTaGCATCAGCACACCGTACTC +
Preference number: 4 (lower is better)
Translates to: GALHILVWDILVQRRQSCISRSG*HQHTVL
Trigger: GAGTACGGTGTGCTGATGCCAGCCACTTCTGGAAAT...GCAGCTTTGTCTCCTCTGAACCAATATATCCCAAACCAATATATGCAAAGCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR CCA 90 bp TGCAGTGAGCTGAGATTGCACCAAAAGAACCAACATGTACTAAAATACCAGTTGGGGGATACTGGAACATaGCCACAAGAGCCAGAGTCA +
Preference number: 4 (lower is better)
Translates to: CSELRLHQKNQHVLKYQLGDTGT*PQEPES
Trigger: TGACTCTGGCTCTTGTGGCCATGTTCCAGTATCCCC...CAACTGGTATTTTAGTACATGTTGGTTCTTTTGGTGCAATCTCAGCTCACTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR CCA 90 bp TTCCACTGTGAACAGCCCTGTCCAGGCCCTTTGCATGCTGTAGTTATTTTCATTTCTGTATTGAAATTCTaGGTTTCCAGCCCAGCAACC +
Preference number: 4 (lower is better)
Translates to: FHCEQPCPGPLHAVVIFISVLKF*VSSPAT
Trigger: GGTTGCTGGGCTGGAAACCCAGAATTTCAATACAGA...AATGAAAATAACTACAGCATGCAAAGGGCCTGGACAGGGCTGTTCACAGTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509237.5
3UTR CAA 72 bp GAATACACACGCACACAATTTAAAGTGATAATTATCTaGGCGGAAGGAGCGAAGGTGGGGGCGTTACAGGAT +
Preference number: 4 (lower is better)
Translates to: EYTRTQFKVIII*AEGAKVGALQD
Trigger: ATCCTGTAACGCCCCCACCTTCGCTCCTTCCGCCAAGATAATTATCACTTTAAATTGTGTGCGTGTGTATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502536.5
CDS-3UTR TCA 90 bp GGTGCTTTGCATATATTGGTTTGGGATATATTGGTTCAGAGGAGACAAAGCTGCCAGCTTCAAGTGTGGTaGAGTTCTGACCACTCCATT +
Preference number: 4 (lower is better)
Translates to: GALHILVWDILVQRRQSCQLQVW*SSDHSI
Trigger: AATGGAGTGGTCAGAACTTCACCACACTTGAAGCTG...GCAGCTTTGTCTCCTCTGAACCAATATATCCCAAACCAATATATGCAAAGCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR TCA 90 bp GTTCTGATGATCTCTGGAAATGTTCATGGACTCTTTCCAGGTGCAAAGACTGACAATAAGGTCACAGTATaGTTTCCTGGCTCCAAGCTC +
Preference number: 4 (lower is better)
Translates to: VLMISGNVHGLFPGAKTDNKVTV*FPGSKL
Trigger: GAGCTTGGAGCCAGGAAATCATACTGTGACCTTATT...GTCAGTCTTTGCACCTGGAAAGAGTCCATGAACATTTCCAGAGATCATCAGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513831.1
CDS-3UTR GCA 90 bp GGTGCTTTGCATATATTGGTTTGGGATATATTGGTTCAGAGGAGACAAAGCTGCTCCACCCTCTGTGCCTaGAATTCTTTCTTCCTCAAC +
Preference number: 4 (lower is better)
Translates to: GALHILVWDILVQRRQSCSTLCA*NSFFLN
Trigger: GTTGAGGAAGAAAGAATTGCAGGCACAGAGGGTGGA...GCAGCTTTGTCTCCTCTGAACCAATATATCCCAAACCAATATATGCAAAGCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR GCA 90 bp GTGATGGGGTGTCTCAAGAAGGCTCAGCTGTGTGAGGCTAGATTTTCTTTAATATTAATGACAGGATGCTaGTCTTGTAAGGGTCAGGGA +
Preference number: 4 (lower is better)
Translates to: VMGCLKKAQLCEARFSLILMTGC*SCKGQG
Trigger: TCCCTGACCCTTACAAGAGCAGCATCCTGTCATTAA...TATTAAAGAAAATCTAGCCTCACACAGCTGAGCCTTCTTGAGACACCCCATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508882.1
CDS-3UTR CCA 90 bp GAGCTGAGATTGCACCAAAAGAACCAACATGTACTAAAATACCAGTTGTGTACCGCGCCATGTACTCTGTaGCAGGTTCCAGTTCACTTA +
Preference number: 4 (lower is better)
Translates to: ELRLHQKNQHVLKYQLCTAPCTL*QVPVHL
Trigger: TAAGTGAACTGGAACCTGCCACAGAGTACATGGCGC...GGTACACAACTGGTATTTTAGTACATGTTGGTTCTTTTGGTGCAATCTCAGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR CCA 90 bp TATATTGGTTCAGAGGAGACAAAGCTGCTCCAGAGCCAACACGGAATTTCCCACAATGGAGCTCTGAACTaGATGGTTTGTCTAGGTTTT +
Preference number: 4 (lower is better)
Translates to: YIGSEETKLLQSQHGISHNGALN*MVCLGF
Trigger: AAAACCTAGACAAACCATCCAGTTCAGAGCTCCATT...GTGGGAAATTCCGTGTTGGCTCTGGAGCAGCTTTGTCTCCTCTGAACCAATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR CCA 90 bp TTTCTGGATGCAGTGATGGGGTGTCTCAAGAAGGCTCAGCTGTGTGAGGCTAGAAGCCAAAACAACATATaGCAACAGATTGAATGTAGA +
Preference number: 4 (lower is better)
Translates to: FLDAVMGCLKKAQLCEARSQNNI*QQIECR
Trigger: TCTACATTCAATCTGTTGCCATATGTTGTTTTGGCT...TCTAGCCTCACACAGCTGAGCCTTCTTGAGACACCCCATCACTGCATCCAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508882.1
CDS-3UTR TCA 90 bp TACACACGCACACAATTTAAAGTGATAATTATCTTGGCGGAAGGAGCGAAGGTGAATTCCCCACCCAGATaGCATTGGATGTTTCAATCC +
Preference number: 4 (lower is better)
Translates to: YTRTQFKVIIILAEGAKVNSPPR*HWMFQS
Trigger: GGATTGAAACATCCAATGTCATCTGGGTGGGGAATT...CACCTTCGCTCCTTCCGCCAAGATAATTATCACTTTAAATTGTGTGCGTGTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502536.5
CDS-3UTR TCA 90 bp TATATTGGTTCAGAGGAGACAAAGCTGCTCCAGAGCCAACACGGAATTTCCCACGTTATAGGTTTCTTGTaGGTCTTGAGTTATTTGCCA +
Preference number: 4 (lower is better)
Translates to: YIGSEETKLLQSQHGISHVIGFL*VLSYLP
Trigger: TGGCAAATAACTCAAGACTCACAAGAAACCTATAAC...GTGGGAAATTCCGTGTTGGCTCTGGAGCAGCTTTGTCTCCTCTGAACCAATATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR TCA 90 bp TGTACCAGGTGCTTTGCATATATTGGTTTGGGATATATTGGTTCAGAGGAGACACTTTCCAACTCAGAGTaGAGGAGTGGGATGTCAATG +
Preference number: 4 (lower is better)
Translates to: CTRCFAYIGLGYIGSEETLSNSE*RSGMSM
Trigger: CATTGACATCCCACTCCTTCACTCTGAGTTGGAAAG...TGTCTCCTCTGAACCAATATATCCCAAACCAATATATGCAAAGCACCTGGTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR TCA 90 bp TTCAGAGTTTCCCAGCTGGTGAGCTGCAGCACACTGATATGCCAAATTATGTTAGATAACAGGTCTCCTTaGTCCACTGACTTTTCAAGT +
Preference number: 4 (lower is better)
Translates to: FRVSQLVSCSTLICQIMLDNRSP*STDFSS
Trigger: ACTTGAAAAGTCAGTGGATCAAGGAGACCTGTTATC...TAACATAATTTGGCATATCAGTGTGCTGCAGCTCACCAGCTGGGAAACTCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509237.5
CDS-3UTR TCA 90 bp ACAGAAGTTATTGTTAGAGTCCTAGTTTTGAAGTTGGGTAGTAAGCTCATTGGTCACCTCCGCTGTGAATaGGGCAAAGATCTACAGCAC +
Preference number: 4 (lower is better)
Translates to: TEVIVRVLVLKLGSKLIGHLRCE*GKDLQH
Trigger: GTGCTGTAGATCTTTGCCTCATTCACAGCGGAGGTG...ACCAATGAGCTTACTACCCAACTTCAAAACTAGGACTCTAACAATAACTTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502536.5
CDS-3UTR TCA 90 bp GGGGATGCGTGCATCCATGAGGAGAAACGTGGCATGAACAATAGGTATAAATTCCCATCACATAAGAAATaGGAATACACACGCACACAA +
Preference number: 4 (lower is better)
Translates to: GDACIHEEKRGMNNRYKFPSHKK*EYTRTQ
Trigger: TTGTGTGCGTGTGTATTCTCATTTCTTATGTGATGG...GAATTTATACCTATTGTTCATGCCACGTTTCTCCTCATGGATGCACGCATCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502536.5
CDS-3UTR TCA 90 bp TTCAGAGTTTCCCAGCTGGTGAGCTGCAGCACACTGATATGCCAAATTATGTTACAAATTATGTTATGCTaGGATGCTGATCCTCTCACG +
Preference number: 4 (lower is better)
Translates to: FRVSQLVSCSTLICQIMLQIMLC*DADPLT
Trigger: CGTGAGAGGATCAGCATCTCAGCATAACATAATTTG...TAACATAATTTGGCATATCAGTGTGCTGCAGCTCACCAGCTGGGAAACTCTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509237.5
CDS-3UTR TCA 90 bp GAGTCTGTGGTGAAAGTTGATGCCAGTTCTGATGATCTCTGGAAATGTTCATGGATTTCCCATGTATGTTaGAGAATCCCCTGGACAGAA +
Preference number: 4 (lower is better)
Translates to: ESVVKVDASSDDLWKCSWISHVC*RIPWTE
Trigger: TTCTGTCCAGGGGATTCTTCAACATACATGGGAAAT...CCATGAACATTTCCAGAGATCATCAGAACTGGCATCAACTTTCACCACAGACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513831.1
CDS-3UTR GCA 90 bp GATAACTGCCTTTATTGTGTCTGTATTGAAATTCTGGGTTTCCAGCCCAGCAACTTAATGACAGGATGCTaGTCTTGTAAGGGTCAGGGA +
Preference number: 4 (lower is better)
Translates to: DNCLYCVCIEILGFQPSNLMTGC*SCKGQG
Trigger: TCCCTGACCCTTACAAGAGCAGCATCCTGTCATTAA...GTTGCTGGGCTGGAAACCCAGAATTTCAATACAGACACAATAAAGGCAGTTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509237.5
CDS-3UTR GCA 90 bp AGAGTTTCCCAGCTGGTGAGCTGCAGCACACTGATATGCCAAATTATGTTATGCTTATTAATGACAGGATaGTGCTCTTGTAAGGGTCAG +
Preference number: 4 (lower is better)
Translates to: RVSQLVSCSTLICQIMLCLLMTG*CSCKGQ
Trigger: CTGACCCTTACAAGAGCAGCATCCTGTCATTAATAA...GCATAACATAATTTGGCATATCAGTGTGCTGCAGCTCACCAGCTGGGAAACTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509237.5
CDS-3UTR GCA 90 bp TGTACCAGGTGCTTTGCATATATTGGTTTGGGATATATTGGTTCAGAGGAGACAACCCAGACAACCTACTaGAGAGTCCAAAGGATGCTA +
Preference number: 4 (lower is better)
Translates to: CTRCFAYIGLGYIGSEETTQTTY*RVQRML
Trigger: TAGCATCCTTTGGACTCTGCAGTAGGTTGTCTGGGT...TGTCTCCTCTGAACCAATATATCCCAAACCAATATATGCAAAGCACCTGGTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR GCA 90 bp GCAGAGTCTGTGGTGAAAGTTGATGCCAGTTCTGATGATCTCTGGAAATGTTCAACTGTTTTCGGGGTCTaGAGAGATGACTATTACAGA +
Preference number: 4 (lower is better)
Translates to: AESVVKVDASSDDLWKCSTVFGV*RDDYYR
Trigger: TCTGTAATAGTCATCTCTGCAGACCCCGAAAACAGT...TGAACATTTCCAGAGATCATCAGAACTGGCATCAACTTTCACCACAGACTCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513831.1
CDS-3UTR CCA 90 bp GAGTCTGTGGTGAAAGTTGATGCCAGTTCTGATGATCTCTGGAAATGTTCATGGCACAGTATGATTTCCTaGCTCCAAGCTCACAATTCT +
Preference number: 4 (lower is better)
Translates to: ESVVKVDASSDDLWKCSWHSMIS*LQAHNS
Trigger: AGAATTGTGAGCTTGGAGCCAGGAAATCATACTGTG...CCATGAACATTTCCAGAGATCATCAGAACTGGCATCAACTTTCACCACAGACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513831.1
CDS-3UTR CCA 90 bp TGCAGTGAGCTGAGATTGCACCAAAAGAACCAACATGTACTAAAATACCAGTTGCTCAGAGTGAAGGAGTaGGATGTCAATGTATCCACC +
Preference number: 4 (lower is better)
Translates to: CSELRLHQKNQHVLKYQLLRVKE*DVNVST
Trigger: GGTGGATACATTGACATCCCACTCCTTCACTCTGAG...CAACTGGTATTTTAGTACATGTTGGTTCTTTTGGTGCAATCTCAGCTCACTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR CCA 90 bp ATGACAGAAGTTATTGTTAGAGTCCTAGTTTTGAAGTTGGGTAGTAAGCTCATTCACTCTTGGCACTCCTaGGACCCACAGGAATTCCCT +
Preference number: 4 (lower is better)
Translates to: MTEVIVRVLVLKLGSKLIHSWHS*DPQEFP
Trigger: AGGGAATTCCTGTGGGTCCCAGGAGTGCCAAGAGTG...AATGAGCTTACTACCCAACTTCAAAACTAGGACTCTAACAATAACTTCTGTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502536.5
CDS-3UTR CCA 90 bp GAGTCTGTGGTGAAAGTTGATGCCAGTTCTGATGATCTCTGGAAATGTTCATGGCTCTGGAAATGTTCATaGACTCTTTCCAGGTGCAAA +
Preference number: 4 (lower is better)
Translates to: ESVVKVDASSDDLWKCSWLWKCS*TLSRCK
Trigger: TTTGCACCTGGAAAGAGTCCATGAACATTTCCAGAG...CCATGAACATTTCCAGAGATCATCAGAACTGGCATCAACTTTCACCACAGACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513831.1
CDS-3UTR TCA 90 bp TGTACCAGGTGCTTTGCATATATTGGTTTGGGATATATTGGTTCAGAGGAGACATGTAAGTGCAAACTCTaGCGCGTAGAATTGGTGGAA +
Preference number: 4 (lower is better)
Translates to: CTRCFAYIGLGYIGSEETCKCKL*RVELVE
Trigger: TTCCACCAATTCTACGCGTCAGAGTTTGCACTTACA...TGTCTCCTCTGAACCAATATATCCCAAACCAATATATGCAAAGCACCTGGTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR TCA 90 bp AGAGTCCTAGTTTTGAAGTTGGGTAGTAAGCTCATTGGTGCTCGTGACATTATTTGTAAGTGCAAACTCTaGCGCGTAGAATTGGTGGAA +
Preference number: 4 (lower is better)
Translates to: RVLVLKLGSKLIGARDIICKCKL*RVELVE
Trigger: TTCCACCAATTCTACGCGTCAGAGTTTGCACTTACA...AATAATGTCACGAGCACCAATGAGCTTACTACCCAACTTCAAAACTAGGACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502536.5
CDS-3UTR TCA 90 bp GAGCTGAGATTGCACCAAAAGAACCAACATGTACTAAAATACCAGTTGTGTACCAATTCCCCACCCAGATaGCATTGGATGTTTCAATCC +
Preference number: 4 (lower is better)
Translates to: ELRLHQKNQHVLKYQLCTNSPPR*HWMFQS
Trigger: GGATTGAAACATCCAATGTCATCTGGGTGGGGAATT...GGTACACAACTGGTATTTTAGTACATGTTGGTTCTTTTGGTGCAATCTCAGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR TCA 90 bp AGAGTCCTAGTTTTGAAGTTGGGTAGTAAGCTCATTGGTGCTCGTGACATTATTTACAGTGCAAAGTCTTaGAGTCCTCGGTTTCACAAG +
Preference number: 4 (lower is better)
Translates to: RVLVLKLGSKLIGARDIIYSAKS*SPRFHK
Trigger: CTTGTGAAACCGAGGACTTCAAGACTTTGCACTGTA...AATAATGTCACGAGCACCAATGAGCTTACTACCCAACTTCAAAACTAGGACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502536.5
CDS-3UTR TCA 90 bp GAGCTGAGATTGCACCAAAAGAACCAACATGTACTAAAATACCAGTTGTGTACCTTCCTCAGTAAAAACTaGACTTCTAGGACCACAGCC +
Preference number: 4 (lower is better)
Translates to: ELRLHQKNQHVLKYQLCTFLSKN*TSRTTA
Trigger: GGCTGTGGTCCTAGAAGTTCAGTTTTTACTGAGGAA...GGTACACAACTGGTATTTTAGTACATGTTGGTTCTTTTGGTGCAATCTCAGCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR TCA 90 bp AGAGTCCTAGTTTTGAAGTTGGGTAGTAAGCTCATTGGTGCTCGTGACATTATTGGGGGCGTTACAGGATaGGATATGACAGAAGTTATT +
Preference number: 4 (lower is better)
Translates to: RVLVLKLGSKLIGARDIIGGVTG*DMTEVI
Trigger: AATAACTTCTGTCATATCTCATCCTGTAACGCCCCC...AATAATGTCACGAGCACCAATGAGCTTACTACCCAACTTCAAAACTAGGACTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502536.5
CDS-3UTR GCA 90 bp TGTACCAGGTGCTTTGCATATATTGGTTTGGGATATATTGGTTCAGAGGAGACAGGTATGAAATCGGCATaGTGGTTAGCAGTAGTGTTC +
Preference number: 4 (lower is better)
Translates to: CTRCFAYIGLGYIGSEETGMKSA*WLAVVF
Trigger: GAACACTACTGCTAACCAGCATGCCGATTTCATACC...TGTCTCCTCTGAACCAATATATCCCAAACCAATATATGCAAAGCACCTGGTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR GCA 90 bp GTTATTGTTAGAGTCCTAGTTTTGAAGTTGGGTAGTAAGCTCATTGGTGCTCGTATAATAGGGGATGCGTaGATCCATGAGGAGAAACGT +
Preference number: 4 (lower is better)
Translates to: VIVRVLVLKLGSKLIGARIIGDA*IHEEKR
Trigger: ACGTTTCTCCTCATGGATGCACGCATCCCCTATTAT...ACGAGCACCAATGAGCTTACTACCCAACTTCAAAACTAGGACTCTAACAATAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502536.5
CDS-3UTR CCA 90 bp GGTGCTTTGCATATATTGGTTTGGGATATATTGGTTCAGAGGAGACAAAGCTGCCACAGTATGATTTCCTaGCTCCAAGCTCACAATTCT +
Preference number: 4 (lower is better)
Translates to: GALHILVWDILVQRRQSCHSMIS*LQAHNS
Trigger: AGAATTGTGAGCTTGGAGCCAGGAAATCATACTGTG...GCAGCTTTGTCTCCTCTGAACCAATATATCCCAAACCAATATATGCAAAGCACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR CCA 90 bp GTTCTGATGATCTCTGGAAATGTTCATGGACTCTTTCCAGGTGCAAAGACTGACAATGGAGCTCTGAACTaGATGGTTTGTCTAGGTTTT +
Preference number: 4 (lower is better)
Translates to: VLMISGNVHGLFPGAKTDNGALN*MVCLGF
Trigger: AAAACCTAGACAAACCATCCAGTTCAGAGCTCCATT...GTCAGTCTTTGCACCTGGAAAGAGTCCATGAACATTTCCAGAGATCATCAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513831.1
CDS-3UTR CCA 90 bp GGTGCTTTGCATATATTGGTTTGGGATATATTGGTTCAGAGGAGACAAAGCTGCAGACGCAGAAAACCATaGGCAGTAGGATATGAATCA +
Preference number: 4 (lower is better)
Translates to: GALHILVWDILVQRRQSCRRRKP*AVGYES
Trigger: TGATTCATATCCTACTGCCCATGGTTTTCTGCGTCT...GCAGCTTTGTCTCCTCTGAACCAATATATCCCAAACCAATATATGCAAAGCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR CCA 90 bp GAGCTGAGATTGCACCAAAAGAACCAACATGTACTAAAATACCAGTTGTGTACCATGAAATCGGCATGCTaGTTAGCAGTAGTGTTCACC +
Preference number: 4 (lower is better)
Translates to: ELRLHQKNQHVLKYQLCTMKSAC*LAVVFT
Trigger: GGTGAACACTACTGCTAACCAGCATGCCGATTTCAT...GGTACACAACTGGTATTTTAGTACATGTTGGTTCTTTTGGTGCAATCTCAGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR CCA 90 bp TATATTGGTTCAGAGGAGACAAAGCTGCTCCAGAGCCAACACGGAATTTCCCACTTGCATATATTGGTTTaGGATATATTGGTTCAGAGG +
Preference number: 4 (lower is better)
Translates to: YIGSEETKLLQSQHGISHLHILV*DILVQR
Trigger: CCTCTGAACCAATATATCCCAAACCAATATATGCAA...GTGGGAAATTCCGTGTTGGCTCTGGAGCAGCTTTGTCTCCTCTGAACCAATATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR CCA 90 bp TATATTGGTTCAGAGGAGACAAAGCTGCTCCAGAGCCAACACGGAATTTCCCACGTGCTTTGCATATATTaGTTTGGGATATATTGGTTC +
Preference number: 4 (lower is better)
Translates to: YIGSEETKLLQSQHGISHVLCIY*FGIYWF
Trigger: GAACCAATATATCCCAAACCAATATATGCAAAGCAC...GTGGGAAATTCCGTGTTGGCTCTGGAGCAGCTTTGTCTCCTCTGAACCAATATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR CCA 90 bp TGTACCAGGTGCTTTGCATATATTGGTTTGGGATATATTGGTTCAGAGGAGACACTTCATAGTGTTGAATaGCACAGTGCAAGGCATTGG +
Preference number: 4 (lower is better)
Translates to: CTRCFAYIGLGYIGSEETLHSVE*HSARHW
Trigger: CCAATGCCTTGCACTGTGCCATTCAACACTATGAAG...TGTCTCCTCTGAACCAATATATCCCAAACCAATATATGCAAAGCACCTGGTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274276.8
3UTR CAA 72 bp GTTGTTGACAGCCACATTATTTTGAGGTGTGGCTACTaGTTTCTCTTCATAGTGTTGAATGGCACAGTGCAA +
Preference number: 4 (lower is better)
Translates to: VVDSHIILRCGY*FLFIVLNGTVQ
Trigger: TTGCACTGTGCCATTCAACACTATGAAGAGAAACAAGTAGCCACACCTCAAAATAATGTGGCTGTCAACAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR TCA 90 bp GGTGCTTTGCATATATTGGTTTGGGATATATTGGTTCAGAGGAGACAAAGCTGCAAGAAGAATGTTGTCTaGAAGACTGCAAATAGAGCC +
Preference number: 4 (lower is better)
Translates to: GALHILVWDILVQRRQSCKKNVV*KTANRA
Trigger: GGCTCTATTTGCAGTCTTTCAGACAACATTCTTCTT...GCAGCTTTGTCTCCTCTGAACCAATATATCCCAAACCAATATATGCAAAGCACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR TCA 90 bp TGCAGTGAGCTGAGATTGCACCAAAAGAACCAACATGTACTAAAATACCAGTTGACAGCCACATTATTTTaGGGTGTGGCTACTTGTTTC +
Preference number: 4 (lower is better)
Translates to: CSELRLHQKNQHVLKYQLTATLF*GVATCF
Trigger: GAAACAAGTAGCCACACCTCAAAATAATGTGGCTGT...CAACTGGTATTTTAGTACATGTTGGTTCTTTTGGTGCAATCTCAGCTCACTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR TCA 90 bp AGAGTCCTAGTTTTGAAGTTGGGTAGTAAGCTCATTGGTGCTCGTGACATTATTCTAGTCTCACCTCGATaGGTCAGGTTAAAAAGGATA +
Preference number: 4 (lower is better)
Translates to: RVLVLKLGSKLIGARDIILVSPR*VRLKRI
Trigger: TATCCTTTTTAACCTGACTCATCGAGGTGAGACTAG...AATAATGTCACGAGCACCAATGAGCTTACTACCCAACTTCAAAACTAGGACTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502536.5
CDS-3UTR TCA 90 bp GATAACTGCCTTTATTGTGTCTGTATTGAAATTCTGGGTTTCCAGCCCAGCAACTTATTGTGTCTGTATTaGAATTCTGGGTTTCCAGCC +
Preference number: 4 (lower is better)
Translates to: DNCLYCVCIEILGFQPSNLLCLY*NSGFPA
Trigger: GGCTGGAAACCCAGAATTTCAATACAGACACAATAA...GTTGCTGGGCTGGAAACCCAGAATTTCAATACAGACACAATAAAGGCAGTTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509237.5
CDS-3UTR CCA 90 bp GTGATGGGGTGTCTCAAGAAGGCTCAGCTGTGTGAGGCTAGATTTTCTTTAATAATTCCATATTCTGATTaGTGTGAGCAGACTATCCAT +
Preference number: 4 (lower is better)
Translates to: VMGCLKKAQLCEARFSLIIPYSD*CEQTIH
Trigger: ATGGATAGTCTGCTCACACCAATCAGAATATGGAAT...TATTAAAGAAAATCTAGCCTCACACAGCTGAGCCTTCTTGAGACACCCCATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508882.1
CDS-3UTR TCA 90 bp AGAGTCCTAGTTTTGAAGTTGGGTAGTAAGCTCATTGGTGCTCGTGACATTATTAAGAAGAATGTTGTCTaGAAGACTGCAAATAGAGCC +
Preference number: 4 (lower is better)
Translates to: RVLVLKLGSKLIGARDIIKKNVV*KTANRA
Trigger: GGCTCTATTTGCAGTCTTTCAGACAACATTCTTCTT...AATAATGTCACGAGCACCAATGAGCTTACTACCCAACTTCAAAACTAGGACTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502536.5
CDS-3UTR TCA 90 bp TGTACCAGGTGCTTTGCATATATTGGTTTGGGATATATTGGTTCAGAGGAGACAGGTGAGGGTTCTCCTTaGATTTTATTAATGACAGGA +
Preference number: 4 (lower is better)
Translates to: CTRCFAYIGLGYIGSEETGEGSP*ILLMTG
Trigger: TCCTGTCATTAATAAAATTCAAGGAGAACCCTCACC...TGTCTCCTCTGAACCAATATATCCCAAACCAATATATGCAAAGCACCTGGTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR GCA 90 bp TGCAGTGAGCTGAGATTGCACCAAAAGAACCAACATGTACTAAAATACCAGTTGTTATTAATGACAGGATaGTGCTCTTGTAAGGGTCAG +
Preference number: 4 (lower is better)
Translates to: CSELRLHQKNQHVLKYQLLLMTG*CSCKGQ
Trigger: CTGACCCTTACAAGAGCAGCATCCTGTCATTAATAA...CAACTGGTATTTTAGTACATGTTGGTTCTTTTGGTGCAATCTCAGCTCACTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR CCA 90 bp AAAGTTGATGCCAGTTCTGATGATCTCTGGAAATGTTCATGGACTCTTTCCAGGACAGGATCTTTCCATTaGCATGCAGTTTTGATAATG +
Preference number: 4 (lower is better)
Translates to: KVDASSDDLWKCSWTLSRTGSFH*HAVLIM
Trigger: CATTATCAAAACTGCATGCCAATGGAAAGATCCTGT...CCTGGAAAGAGTCCATGAACATTTCCAGAGATCATCAGAACTGGCATCAACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513831.1
CDS-3UTR CCA 90 bp GGTGCTTTGCATATATTGGTTTGGGATATATTGGTTCAGAGGAGACAAAGCTGCTATCTTTGTCCCTTCTaGCTTGCTTACAACTTCAAT +
Preference number: 4 (lower is better)
Translates to: GALHILVWDILVQRRQSCYLCPF*LAYNFN
Trigger: ATTGAAGTTGTAAGCAAGCCAGAAGGGACAAAGATA...GCAGCTTTGTCTCCTCTGAACCAATATATCCCAAACCAATATATGCAAAGCACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR CCA 90 bp AAAGTTGATGCCAGTTCTGATGATCTCTGGAAATGTTCATGGACTCTTTCCAGGAGTTCTGATGATCTCTaGAAATGTTCATGGACTCTT +
Preference number: 4 (lower is better)
Translates to: KVDASSDDLWKCSWTLSRSSDDL*KCSWTL
Trigger: AAGAGTCCATGAACATTTCCAGAGATCATCAGAACT...CCTGGAAAGAGTCCATGAACATTTCCAGAGATCATCAGAACTGGCATCAACTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513831.1
CDS-3UTR TCA 90 bp ACAGAAGTTATTGTTAGAGTCCTAGTTTTGAAGTTGGGTAGTAAGCTCATTGGTCTCCTCAAGTACTTTTaGGACAAAAAGAACGATGCC +
Preference number: 4 (lower is better)
Translates to: TEVIVRVLVLKLGSKLIGLLKYF*DKKNDA
Trigger: GGCATCGTTCTTTTTGTCTCAAAAGTACTTGAGGAG...ACCAATGAGCTTACTACCCAACTTCAAAACTAGGACTCTAACAATAACTTCTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000502536.5
CDS-3UTR TCA 90 bp GTTATTGTTAGAGTCCTAGTTTTGAAGTTGGGTAGTAAGCTCATTGGTGCTCGTGTTTCTTGTGAGTCTTaGGTTATTTGCCAATTACAC +
Preference number: 4 (lower is better)
Translates to: VIVRVLVLKLGSKLIGARVSCES*VICQLH
Trigger: GTGTAATTGGCAAATAACTCAAGACTCACAAGAAAC...ACGAGCACCAATGAGCTTACTACCCAACTTCAAAACTAGGACTCTAACAATAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502536.5
CDS-3UTR TCA 90 bp GTTATTGTTAGAGTCCTAGTTTTGAAGTTGGGTAGTAAGCTCATTGGTGCTCGTGTTATAGGTTTCTTGTaGGTCTTGAGTTATTTGCCA +
Preference number: 4 (lower is better)
Translates to: VIVRVLVLKLGSKLIGARVIGFL*VLSYLP
Trigger: TGGCAAATAACTCAAGACTCACAAGAAACCTATAAC...ACGAGCACCAATGAGCTTACTACCCAACTTCAAAACTAGGACTCTAACAATAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502536.5
CDS-3UTR GCA 90 bp GGTGCTTTGCATATATTGGTTTGGGATATATTGGTTCAGAGGAGACAAAGCTGCGACATTTCCTTGACTTaGCTCACAATAGATATTTGT +
Preference number: 4 (lower is better)
Translates to: GALHILVWDILVQRRQSCDISLT*LTIDIC
Trigger: ACAAATATCTATTGTGAGGCAAGTCAAGGAAATGTC...GCAGCTTTGTCTCCTCTGAACCAATATATCCCAAACCAATATATGCAAAGCACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR GCA 90 bp ATGATAACTGCCTTTATTGTGTCTGTATTGAAATTCTGGGTTTCCAGCCCAGCATCCAGGCCCTTTGCATaGTGTAGTTATTTTCATTTT +
Preference number: 4 (lower is better)
Translates to: MITAFIVSVLKFWVSSPASRPFA*CSYFHF
Trigger: AAAATGAAAATAACTACAGCATGCAAAGGGCCTGGA...TGCTGGGCTGGAAACCCAGAATTTCAATACAGACACAATAAAGGCAGTTATCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509237.5
CDS-3UTR CCA 90 bp GAGCTGAGATTGCACCAAAAGAACCAACATGTACTAAAATACCAGTTGTGTACCACAGGATCTTTCCATTaGCATGCAGTTTTGATAATG +
Preference number: 4 (lower is better)
Translates to: ELRLHQKNQHVLKYQLCTTGSFH*HAVLIM
Trigger: CATTATCAAAACTGCATGCCAATGGAAAGATCCTGT...GGTACACAACTGGTATTTTAGTACATGTTGGTTCTTTTGGTGCAATCTCAGCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR GCA 90 bp GTTATTGTTAGAGTCCTAGTTTTGAAGTTGGGTAGTAAGCTCATTGGTGCTCGTGACATTTCCTTGACTTaGCTCACAATAGATATTTGT +
Preference number: 4 (lower is better)
Translates to: VIVRVLVLKLGSKLIGARDISLT*LTIDIC
Trigger: ACAAATATCTATTGTGAGGCAAGTCAAGGAAATGTC...ACGAGCACCAATGAGCTTACTACCCAACTTCAAAACTAGGACTCTAACAATAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502536.5
3UTR CAA 72 bp ATGACAGAAGTTATTGTTAGAGTCCTAGTTTTGAAGTaGGGTAGTAAGCTCATTGGTGCTCGTGACATTATT +
Preference number: 4 (lower is better)
Translates to: MTEVIVRVLVLK*GSKLIGARDII
Trigger: AATAATGTCACGAGCACCAATGAGCTTACTACCCAACTTCAAAACTAGGACTCTAACAATAACTTCTGTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502536.5
CDS-3UTR TCA 90 bp ATGACAGAAGTTATTGTTAGAGTCCTAGTTTTGAAGTTGGGTAGTAAGCTCATTGCACACTATTCAAGTTaGATGCAGTTACATGTGGAT +
Preference number: 4 (lower is better)
Translates to: MTEVIVRVLVLKLGSKLIAHYSS*MQLHVD
Trigger: ATCCACATGTAACTGCATTCAACTTGAATAGTGTGC...AATGAGCTTACTACCCAACTTCAAAACTAGGACTCTAACAATAACTTCTGTCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502536.5
CDS GCA 90 bp GGGAACGGGCTGCTGCACTCCCGGTCGCGTCCAGCCGGGATGGGCTaGGAAGTTGTCGGATTCTTTCCCGCACAGCACGGGGCTCGCCCG +
Preference number: 5 (lower is better)
Translates to: GNGLLHSRSRPAGMG*EVVGFFPAQHGARP
Trigger: CGGGCGAGCCCCGTGCTGTGCGGGAAAGAATCCGACAACTTCGCAGCCCATCCCGGCTGGACGCGACCGGGAGTGCAGCAGCCCGTTCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS CCA 90 bp AGGAGGGGAACGGGCTGCTGCACTCCCGGTCGCGTCCAGCCGGGATaGGCTGCGAAGTTGTCGGATTCTTTCCCGCACAGCACGGGGCTC +
Preference number: 5 (lower is better)
Translates to: RRGTGCCTPGRVQPG*AAKLSDSFPHSTGL
Trigger: GAGCCCCGTGCTGTGCGGGAAAGAATCCGACAACTTCGCAGCCCATCCCGGCTGGACGCGACCGGGAGTGCAGCAGCCCGTTCCCCTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR CAA 90 bp GGAGGCTGGGGCAGGAGAACTGTTTGTTTGAATCTAGGAGGCGGAAGCTGCAGTGCACAGTGCAAGGCATaGGGCACCAGAAGCATGAGC +
Preference number: 5 (lower is better)
Translates to: GGWGRRTVCLNLGGGSCSAQCKA*GTRSMS
Trigger: GCTCATGCTTCTGGTGCCCAATGCCTTGCACTGTGC...ACTGCAGCTTCCGCCTCCTAGATTCAAACAAACAGTTCTCCTGCCCCAGCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR CAA 90 bp GGAGGCTGGGGCAGGAGAACTGTTTGTTTGAATCTAGGAGGCGGAAGCTGCAGTGTCTCTAGGGCAAGCTaGCTCCAATGGGGAGTGTTA +
Preference number: 5 (lower is better)
Translates to: GGWGRRTVCLNLGGGSCSVSRAS*LQWGVL
Trigger: TAACACTCCCCATTGGAGCAAGCTTGCCCTAGAGAC...ACTGCAGCTTCCGCCTCCTAGATTCAAACAAACAGTTCTCCTGCCCCAGCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS TCA 90 bp ACATCAGGGGCCTCTGAGGGAGCAGCTTCAAGTGTGGTGAAGTTCTaGCCACTCCATTCACTCCATTTCCAGAAGTGGCTGGCATCAGCA +
Preference number: 5 (lower is better)
Translates to: TSGASEGAASSVVKF*PLHSLHFQKWLASA
Trigger: TGCTGATGCCAGCCACTTCTGGAAATGGAGTGAATGGAGTGGTCAGAACTTCACCACACTTGAAGCTGCTCCCTCAGAGGCCCCTGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274276.8
ENST00000513831.1
CDS-3UTR CAA 90 bp CATGATCCTGCCGTCTCTAGGGCAAGCTTGCTCCAATGGGGAGTGTTAAGTTCCGTAGCTTTGGGAAGGTaGTTTAGACCACCCCAAGGC +
Preference number: 5 (lower is better)
Translates to: HDPAVSRASLLQWGVLSSVALGR*FRPPQG
Trigger: GCCTTGGGGTGGTCTAAACAACCTTCCCAAAGCTAC...GGAACTTAACACTCCCCATTGGAGCAAGCTTGCCCTAGAGACGGCAGGATCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS GCA 90 bp TTAGACCACCCCAAGGCAGTGTCCGTCCCAGGATCCCAAGTACAGTaGAAAGTCTTGAAGTCCTCGGTTTCACAAGAAAAGTCCTTGGGC +
Preference number: 5 (lower is better)
Translates to: LDHPKAVSVPGSQVQ*KVLKSSVSQEKSLG
Trigger: GCCCAAGGACTTTTCTTGTGAAACCGAGGACTTCAAGACTTTGCACTGTACTTGGGATCCTGGGACGGACACTGCCTTGGGGTGGTCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274276.8
ENST00000502536.5
CDS GCA 90 bp TTCTCGGTCGGGGGAGGCAAGGCAAGACGCAGGGAGACTGCCATTTaGATTTTATACTCTGAACAGTGTGGTGCCTCTACTGGGTTTGTT +
Preference number: 5 (lower is better)
Translates to: FSVGGGKARRRETAI*ILYSEQCGASTGFV
Trigger: AACAAACCCAGTAGAGGCACCACACTGTTCAGAGTATAAAATGCAAATGGCAGTCTCCCTGCGTCTTGCCTTGCCTCCCCCGACCGAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR CAA 90 bp GGAGGCTGGGGCAGGAGAACTGTTTGTTTGAATCTAGGAGGCGGAAGCTGCAGTTGTCAAGGATTAGTTTaGTGCTGTTGGCTGGTGCTG +
Preference number: 5 (lower is better)
Translates to: GGWGRRTVCLNLGGGSCSCQGLV*CCWLVL
Trigger: CAGCACCAGCCAACAGCACAAAACTAATCCTTGACA...ACTGCAGCTTCCGCCTCCTAGATTCAAACAAACAGTTCTCCTGCCCCAGCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR CAA 90 bp TGCAAGGCATTGGGCACCAGAAGCATGAGCATAGGCAGAGCCATTTCCACCATGTCTTCCTCAACCTCTTaGTTTTCGGGGTCTGCAGAG +
Preference number: 5 (lower is better)
Translates to: CKALGTRSMSIGRAISTMSSSTS*FSGSAE
Trigger: CTCTGCAGACCCCGAAAACAAAGAGGTTGAGGAAGA...CATGGTGGAAATGGCTCTGCCTATGCTCATGCTTCTGGTGCCCAATGCCTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS TCA 90 bp CCAAGGCAGTGTCCGTCCCAGGATCCCAAGTACAGTGCAAAGTCTTaGAGTCCTCGGTTTCACAAGAAAAGTCCTTGGGCTCCTCAAGTA +
Preference number: 5 (lower is better)
Translates to: PRQCPSQDPKYSAKS*SPRFHKKSPWAPQV
Trigger: TACTTGAGGAGCCCAAGGACTTTTCTTGTGAAACCGAGGACTTCAAGACTTTGCACTGTACTTGGGATCCTGGGACGGACACTGCCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274276.8
ENST00000502536.5
CDS-3UTR CAA 90 bp TGCAAGGCATTGGGCACCAGAAGCATGAGCATAGGCAGAGCCATTTCCACCATGCCCACCCAGATGACATaGGATGTTTCAATCCTACTG +
Preference number: 5 (lower is better)
Translates to: CKALGTRSMSIGRAISTMPTQMT*DVSILL
Trigger: CAGTAGGATTGAAACATCCAATGTCATCTGGGTGGG...CATGGTGGAAATGGCTCTGCCTATGCTCATGCTTCTGGTGCCCAATGCCTTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR CAA 90 bp TGCAAGGCATTGGGCACCAGAAGCATGAGCATAGGCAGAGCCATTTCCACCATGCTGTCCAGTAGAATCTaGTACACTGACTTCCTCCCA +
Preference number: 5 (lower is better)
Translates to: CKALGTRSMSIGRAISTMLSSRI*YTDFLP
Trigger: TGGGAGGAAGTCAGTGTACAAGATTCTACTGGACAG...CATGGTGGAAATGGCTCTGCCTATGCTCATGCTTCTGGTGCCCAATGCCTTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR CAA 90 bp CATGATCCTGCCGTCTCTAGGGCAAGCTTGCTCCAATGGGGAGTGTTAAGTTCCACTGTGCTTGTGGTATaGGGACCTACATTCTTCCAC +
Preference number: 5 (lower is better)
Translates to: HDPAVSRASLLQWGVLSSTVLVV*GPTFFH
Trigger: GTGGAAGAATGTAGGTCCCAATACCACAAGCACAGT...GGAACTTAACACTCCCCATTGGAGCAAGCTTGCCCTAGAGACGGCAGGATCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR CAA 90 bp TGCAAGGCATTGGGCACCAGAAGCATGAGCATAGGCAGAGCCATTTCCACCATGAGGAGAACTGTTTGTTaGAATCTAGGAGGCGGAAGC +
Preference number: 5 (lower is better)
Translates to: CKALGTRSMSIGRAISTMRRTVC*NLGGGS
Trigger: GCTTCCGCCTCCTAGATTCAAACAAACAGTTCTCCT...CATGGTGGAAATGGCTCTGCCTATGCTCATGCTTCTGGTGCCCAATGCCTTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS CCA 90 bp GTGCTAATGACTGTGCTTGTGGTATTGGGACCTACATTCTTCCACTaGAAATCACCGAGCACATCCTGGGTATGGTCACACCAGTCCACA +
Preference number: 5 (lower is better)
Translates to: VLMTVLVVLGPTFFH*KSPSTSWVWSHQST
Trigger: TGTGGACTGGTGTGACCATACCCAGGATGTGCTCGGTGATTTCCAGTGGAAGAATGTAGGTCCCAATACCACAAGCACAGTCATTAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR CAA 90 bp TGCAAGGCATTGGGCACCAGAAGCATGAGCATAGGCAGAGCCATTTCCACCATGTATAACATCTCCAGGTaGGGGTTTCCAAGACAGAGA +
Preference number: 5 (lower is better)
Translates to: CKALGTRSMSIGRAISTMYNISR*GFPRQR
Trigger: TCTCTGTCTTGGAAACCCCAACCTGGAGATGTTATA...CATGGTGGAAATGGCTCTGCCTATGCTCATGCTTCTGGTGCCCAATGCCTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR CAA 90 bp GGAGGCTGGGGCAGGAGAACTGTTTGTTTGAATCTAGGAGGCGGAAGCTGCAGTTTTGTCCCTTCTGGCTaGCTTACAACTTCAATAGCA +
Preference number: 5 (lower is better)
Translates to: GGWGRRTVCLNLGGGSCSFVPSG*LTTSIA
Trigger: TGCTATTGAAGTTGTAAGCAAGCCAGAAGGGACAAA...ACTGCAGCTTCCGCCTCCTAGATTCAAACAAACAGTTCTCCTGCCCCAGCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR CAA 90 bp TGCAAGGCATTGGGCACCAGAAGCATGAGCATAGGCAGAGCCATTTCCACCATGCTAGGAACTGTATCTTaGTCCCTTCTGGCTTGCTTA +
Preference number: 5 (lower is better)
Translates to: CKALGTRSMSIGRAISTMLGTVS*SLLACL
Trigger: TAAGCAAGCCAGAAGGGACAAAGATACAGTTCCTAG...CATGGTGGAAATGGCTCTGCCTATGCTCATGCTTCTGGTGCCCAATGCCTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR CAA 90 bp GGTGCTTTGCATATATTGGTTTGGGATATATTGGTTCAGAGGAGACAAAGCTGCAGGCAGGAGAATTGCTaGACCCTGGGAGGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: GALHILVWDILVQRRQSCRQENC*TLGGGG
Trigger: ACCTCCGCCTCCCAGGGTCAAGCAATTCTCCTGCCT...GCAGCTTTGTCTCCTCTGAACCAATATATCCCAAACCAATATATGCAAAGCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS CCA 90 bp CCTCCCAGGAACTCCAGTTGCTCCAGAAATTTGGCTCAGGGAACTTaGCATCGTCCACCAAACTCTTTATTCTTACAAAGTGTGTGGCAC +
Preference number: 5 (lower is better)
Translates to: PPRNSSCSRNLAQGT*HRPPNSLFLQSVWH
Trigger: GTGCCACACACTTTGTAAGAATAAAGAGTTTGGTGGACGATGCCAAGTTCCCTGAGCCAAATTTCTGGAGCAACTGGAGTTCCTGGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274276.8
ENST00000502536.5
CDS-3UTR CAA 90 bp TCTTGGCGGAAGGAGCGAAGGTGGGGGCGTTACAGGATGAGATATGACAGAAGTGGCACACTATTCAAGTaGAATGCAGTTACATGTGGA +
Preference number: 5 (lower is better)
Translates to: SWRKERRWGRYRMRYDRSGTLFK*NAVTCG
Trigger: TCCACATGTAACTGCATTCAACTTGAATAGTGTGCC...ACTTCTGTCATATCTCATCCTGTAACGCCCCCACCTTCGCTCCTTCCGCCAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502536.5
CDS-3UTR CAA 90 bp TCTTGGCGGAAGGAGCGAAGGTGGGGGCGTTACAGGATGAGATATGACAGAAGTGCTCCTCAAGTACTTTaGAGACAAAAAGAACGATGC +
Preference number: 5 (lower is better)
Translates to: SWRKERRWGRYRMRYDRSAPQVL*RQKERC
Trigger: GCATCGTTCTTTTTGTCTCAAAAGTACTTGAGGAGC...ACTTCTGTCATATCTCATCCTGTAACGCCCCCACCTTCGCTCCTTCCGCCAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000502536.5
CDS-3UTR CAA 90 bp TGCAAGGCATTGGGCACCAGAAGCATGAGCATAGGCAGAGCCATTTCCACCATGTACTCACCGTTCACCTaGATGGAAACATTGTATTGC +
Preference number: 5 (lower is better)
Translates to: CKALGTRSMSIGRAISTMYSPFT*METLYC
Trigger: GCAATACAATGTTTCCATCAAGGTGAACGGTGAGTA...CATGGTGGAAATGGCTCTGCCTATGCTCATGCTTCTGGTGCCCAATGCCTTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR CAA 90 bp GGAGGCTGGGGCAGGAGAACTGTTTGTTTGAATCTAGGAGGCGGAAGCTGCAGTTCTGAACTGGATGGTTaGTCTAGGTTTTCTACAACT +
Preference number: 5 (lower is better)
Translates to: GGWGRRTVCLNLGGGSCSSELDG*SRFSTT
Trigger: AGTTGTAGAAAACCTAGACAAACCATCCAGTTCAGA...ACTGCAGCTTCCGCCTCCTAGATTCAAACAAACAGTTCTCCTGCCCCAGCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR CAA 90 bp TATATTGGTTCAGAGGAGACAAAGCTGCTCCAGAGCCAACACGGAATTTCCCACGTTGGGAGACTGTCCTaGTCTCCAAACATGGGTGAA +
Preference number: 5 (lower is better)
Translates to: YIGSEETKLLQSQHGISHVGRLS*SPNMGE
Trigger: TTCACCCATGTTTGGAGACAAGGACAGTCTCCCAAC...GTGGGAAATTCCGTGTTGGCTCTGGAGCAGCTTTGTCTCCTCTGAACCAATATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR CAA 90 bp CATGATCCTGCCGTCTCTAGGGCAAGCTTGCTCCAATGGGGAGTGTTAAGTTCCAGTCTAAAATCTGTTTaGGCCTCAAACACCTGTGAG +
Preference number: 5 (lower is better)
Translates to: HDPAVSRASLLQWGVLSSSLKSV*ASNTCE
Trigger: CTCACAGGTGTTTGAGGCCAAAACAGATTTTAGACT...GGAACTTAACACTCCCCATTGGAGCAAGCTTGCCCTAGAGACGGCAGGATCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS TCA 90 bp CTCTACTGGGTTTGTTGGGAGACTGTCCTTGTCTCCAAACATGGGTaGAGCCAACTGGGACACATAATTCAAACTTGTTTCTCCAGCTGG +
Preference number: 5 (lower is better)
Translates to: LYWVCWETVLVSKHG*SQLGHIIQTCFSSW
Trigger: CCAGCTGGAGAAACAAGTTTGAATTATGTGTCCCAGTTGGCTTCACCCATGTTTGGAGACAAGGACAGTCTCCCAACAAACCCAGTAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR CAA 90 bp GAGCTGAGATTGCACCAAAAGAACCAACATGTACTAAAATACCAGTTGTGTACCGGATGGGCTGCGAAGTaGTCGGATTCTTTCCCGCAC +
Preference number: 5 (lower is better)
Translates to: ELRLHQKNQHVLKYQLCTGWAAK*SDSFPH
Trigger: GTGCGGGAAAGAATCCGACAACTTCGCAGCCCATCC...GGTACACAACTGGTATTTTAGTACATGTTGGTTCTTTTGGTGCAATCTCAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR CAA 90 bp TATATTGGTTCAGAGGAGACAAAGCTGCTCCAGAGCCAACACGGAATTTCCCACAGTTGCTCCAGAAATTaGGCTCAGGGAACTTGGCAT +
Preference number: 5 (lower is better)
Translates to: YIGSEETKLLQSQHGISHSCSRN*AQGTWH
Trigger: ATGCCAAGTTCCCTGAGCCAAATTTCTGGAGCAACT...GTGGGAAATTCCGTGTTGGCTCTGGAGCAGCTTTGTCTCCTCTGAACCAATATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR CAA 90 bp TGCAAGGCATTGGGCACCAGAAGCATGAGCATAGGCAGAGCCATTTCCACCATGTTCACTGACATTTCCTaGACTTGCCTCACAATAGAT +
Preference number: 5 (lower is better)
Translates to: CKALGTRSMSIGRAISTMFTDIS*TCLTID
Trigger: ATCTATTGTGAGGCAAGTCAAGGAAATGTCAGTGAA...CATGGTGGAAATGGCTCTGCCTATGCTCATGCTTCTGGTGCCCAATGCCTTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR CAA 90 bp TGCAAGGCATTGGGCACCAGAAGCATGAGCATAGGCAGAGCCATTTCCACCATGCATTGGCATGCAGTTTaGATAATGGCTTCCAGAATA +
Preference number: 5 (lower is better)
Translates to: CKALGTRSMSIGRAISTMHWHAV*IMASRI
Trigger: TATTCTGGAAGCCATTATCAAAACTGCATGCCAATG...CATGGTGGAAATGGCTCTGCCTATGCTCATGCTTCTGGTGCCCAATGCCTTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR CAA 90 bp GGAGGCTGGGGCAGGAGAACTGTTTGTTTGAATCTAGGAGGCGGAAGCTGCAGTAACAGGATCTTTCCATaGGCATGCAGTTTTGATAAT +
Preference number: 5 (lower is better)
Translates to: GGWGRRTVCLNLGGGSCSNRIFP*ACSFDN
Trigger: ATTATCAAAACTGCATGCCAATGGAAAGATCCTGTT...ACTGCAGCTTCCGCCTCCTAGATTCAAACAAACAGTTCTCCTGCCCCAGCCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR CAA 90 bp TTGATGCCAGTTCTGATGATCTCTGGAAATGTTCATGGACTCTTTCCAGGTGCAGCACCCACACTGTTGTaGGCTATGACGCAGATTTGG +
Preference number: 5 (lower is better)
Translates to: LMPVLMISGNVHGLFPGAAPTLL*AMTQIW
Trigger: CCAAATCTGCGTCATAGCCAACAACAGTGTGGGTGC...TGCACCTGGAAAGAGTCCATGAACATTTCCAGAGATCATCAGAACTGGCATCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513831.1
CDS-3UTR CAA 90 bp CATGATCCTGCCGTCTCTAGGGCAAGCTTGCTCCAATGGGGAGTGTTAAGTTCCATAGACATGGTACCCTaGTATAAAACCAGGTTGAGA +
Preference number: 5 (lower is better)
Translates to: HDPAVSRASLLQWGVLSSIDMVP*YKTRLR
Trigger: TCTCAACCTGGTTTTATACAAGGGTACCATGTCTAT...GGAACTTAACACTCCCCATTGGAGCAAGCTTGCCCTAGAGACGGCAGGATCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR CAA 90 bp GGAGGCTGGGGCAGGAGAACTGTTTGTTTGAATCTAGGAGGCGGAAGCTGCAGTACACATAATTCAAACTaGTTTCTCCAGCTGGGATTT +
Preference number: 5 (lower is better)
Translates to: GGWGRRTVCLNLGGGSCSTHNSN*FLQLGF
Trigger: AAATCCCAGCTGGAGAAACAAGTTTGAATTATGTGT...ACTGCAGCTTCCGCCTCCTAGATTCAAACAAACAGTTCTCCTGCCCCAGCCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR CAA 90 bp GGAGGCTGGGGCAGGAGAACTGTTTGTTTGAATCTAGGAGGCGGAAGCTGCAGTGTTTATTTAGGCCAGTaGTTGACAGCCACATTATTT +
Preference number: 5 (lower is better)
Translates to: GGWGRRTVCLNLGGGSCSVYLGQ*LTATLF
Trigger: AAATAATGTGGCTGTCAACAACTGGCCTAAATAAAC...ACTGCAGCTTCCGCCTCCTAGATTCAAACAAACAGTTCTCCTGCCCCAGCCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS CCA 90 bp TTGTACACTGACTTCCTCCCAGGAACTCCAGTTGCTCCAGAAATTTaGCTCAGGGAACTTGGCATCGTCCACCAAACTCTTTATTCTTAC +
Preference number: 5 (lower is better)
Translates to: LYTDFLPGTPVAPEI*LRELGIVHQTLYSY
Trigger: GTAAGAATAAAGAGTTTGGTGGACGATGCCAAGTTCCCTGAGCCAAATTTCTGGAGCAACTGGAGTTCCTGGGAGGAAGTCAGTGTACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274276.8
ENST00000502536.5
CDS-3UTR CAA 90 bp GCAGAGTCTGTGGTGAAAGTTGATGCCAGTTCTGATGATCTCTGGAAATGTTCAGGCTATGACGCAGATTaGGTAGGAACACCTGTCAAG +
Preference number: 5 (lower is better)
Translates to: AESVVKVDASSDDLWKCSGYDAD*VGTPVK
Trigger: CTTGACAGGTGTTCCTACCAAATCTGCGTCATAGCC...TGAACATTTCCAGAGATCATCAGAACTGGCATCAACTTTCACCACAGACTCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513831.1
CDS-3UTR CAA 90 bp GCAGAGTCTGTGGTGAAAGTTGATGCCAGTTCTGATGATCTCTGGAAATGTTCAGAAGCACCCACACTGTaGTTGGCTATGACGCAGATT +
Preference number: 5 (lower is better)
Translates to: AESVVKVDASSDDLWKCSEAPTL*LAMTQI
Trigger: AATCTGCGTCATAGCCAACAACAGTGTGGGTGCTTC...TGAACATTTCCAGAGATCATCAGAACTGGCATCAACTTTCACCACAGACTCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513831.1
CDS-3UTR CAA 90 bp GGTGCTTTGCATATATTGGTTTGGGATATATTGGTTCAGAGGAGACAAAGCTGCCCTCTACTGGGTTTGTaGGGAGACTGTCCTTGTCTC +
Preference number: 5 (lower is better)
Translates to: GALHILVWDILVQRRQSCPLLGL*GDCPCL
Trigger: GAGACAAGGACAGTCTCCCAACAAACCCAGTAGAGG...GCAGCTTTGTCTCCTCTGAACCAATATATCCCAAACCAATATATGCAAAGCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR CAA 90 bp TATATTGGTTCAGAGGAGACAAAGCTGCTCCAGAGCCAACACGGAATTTCCCACTTTCTCTTCATAGTGTaGAATGGCACAGTGCAAGGC +
Preference number: 5 (lower is better)
Translates to: YIGSEETKLLQSQHGISHFLFIV*NGTVQG
Trigger: GCCTTGCACTGTGCCATTCAACACTATGAAGAGAAA...GTGGGAAATTCCGTGTTGGCTCTGGAGCAGCTTTGTCTCCTCTGAACCAATATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR CAA 90 bp ACAGAAGTTATTGTTAGAGTCCTAGTTTTGAAGTTGGGTAGTAAGCTCATTGGTTCTTGCTGCGCACTCTaGGCACTCCTGGGACCCACA +
Preference number: 5 (lower is better)
Translates to: TEVIVRVLVLKLGSKLIGSCCAL*ALLGPT
Trigger: TGTGGGTCCCAGGAGTGCCAAGAGTGCGCAGCAAGA...ACCAATGAGCTTACTACCCAACTTCAAAACTAGGACTCTAACAATAACTTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502536.5
CDS-3UTR CAA 90 bp ATGACAGAAGTTATTGTTAGAGTCCTAGTTTTGAAGTTGGGTAGTAAGCTCATTCCATCAGTTCTGGTTTaGCCGCGGGCGAAGGGCTCC +
Preference number: 5 (lower is better)
Translates to: MTEVIVRVLVLKLGSKLIPSVLV*PRAKGS
Trigger: GGAGCCCTTCGCCCGCGGCAAAACCAGAACTGATGG...AATGAGCTTACTACCCAACTTCAAAACTAGGACTCTAACAATAACTTCTGTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502536.5
CDS-3UTR CAA 90 bp AGAGTCCTAGTTTTGAAGTTGGGTAGTAAGCTCATTGGTGCTCGTGACATTATTGTAGCTTTGGGAAGGTaGTTTAGACCACCCCAAGGC +
Preference number: 5 (lower is better)
Translates to: RVLVLKLGSKLIGARDIIVALGR*FRPPQG
Trigger: GCCTTGGGGTGGTCTAAACAACCTTCCCAAAGCTAC...AATAATGTCACGAGCACCAATGAGCTTACTACCCAACTTCAAAACTAGGACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502536.5
CDS-3UTR CAA 90 bp GAGTCTGTGGTGAAAGTTGATGCCAGTTCTGATGATCTCTGGAAATGTTCATGGTGTCAAGGATTAGTTTaGTGCTGTTGGCTGGTGCTG +
Preference number: 5 (lower is better)
Translates to: ESVVKVDASSDDLWKCSWCQGLV*CCWLVL
Trigger: CAGCACCAGCCAACAGCACAAAACTAATCCTTGACA...CCATGAACATTTCCAGAGATCATCAGAACTGGCATCAACTTTCACCACAGACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513831.1
CDS-3UTR CAA 90 bp TGCAGTGAGCTGAGATTGCACCAAAAGAACCAACATGTACTAAAATACCAGTTGGCACCCACACTGTTGTaGGCTATGACGCAGATTTGG +
Preference number: 5 (lower is better)
Translates to: CSELRLHQKNQHVLKYQLAPTLL*AMTQIW
Trigger: CCAAATCTGCGTCATAGCCAACAACAGTGTGGGTGC...CAACTGGTATTTTAGTACATGTTGGTTCTTTTGGTGCAATCTCAGCTCACTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR CAA 90 bp AGAGTCCTAGTTTTGAAGTTGGGTAGTAAGCTCATTGGTGCTCGTGACATTATTTTGCAATTTCCCGTCTaGCTGCGCACTCTTGGCACT +
Preference number: 5 (lower is better)
Translates to: RVLVLKLGSKLIGARDIILQFPV*LRTLGT
Trigger: AGTGCCAAGAGTGCGCAGCAAGACGGGAAATTGCAA...AATAATGTCACGAGCACCAATGAGCTTACTACCCAACTTCAAAACTAGGACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502536.5
CDS-3UTR CAA 90 bp TTTCTGGATGCAGTGATGGGGTGTCTCAAGAAGGCTCAGCTGTGTGAGGCTAGAACATATGGCAACAGATaGAATGTAGAAGCAAGTATG +
Preference number: 5 (lower is better)
Translates to: FLDAVMGCLKKAQLCEARTYGNR*NVEASM
Trigger: CATACTTGCTTCTACATTCAATCTGTTGCCATATGT...TCTAGCCTCACACAGCTGAGCCTTCTTGAGACACCCCATCACTGCATCCAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508882.1
CDS CCA 90 bp CTGTCAAGGATTAGTTTTGTGCTGTTGGCTGGTGCTGGAATGGAATaGAGCTCTGAACTGGATGGTTTGTCTAGGTTTTCTACAACTACA +
Preference number: 5 (lower is better)
Translates to: LSRISFVLLAGAGME*SSELDGLSRFSTTT
Trigger: TGTAGTTGTAGAAAACCTAGACAAACCATCCAGTTCAGAGCTCCATTCCATTCCAGCACCAGCCAACAGCACAAAACTAATCCTTGACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274276.8
ENST00000513831.1
CDS CCA 90 bp AACACCTGTCAAGGATTAGTTTTGTGCTGTTGGCTGGTGCTGGAATaGAATGGAGCTCTGAACTGGATGGTTTGTCTAGGTTTTCTACAA +
Preference number: 5 (lower is better)
Translates to: NTCQGLVLCCWLVLE*NGALNWMVCLGFLQ
Trigger: TTGTAGAAAACCTAGACAAACCATCCAGTTCAGAGCTCCATTCCATTCCAGCACCAGCCAACAGCACAAAACTAATCCTTGACAGGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274276.8
ENST00000513831.1
CDS-3UTR CAA 90 bp TACACACGCACACAATTTAAAGTGATAATTATCTTGGCGGAAGGAGCGAAGGTGCCCACCCAGATGACATaGGATGTTTCAATCCTACTG +
Preference number: 5 (lower is better)
Translates to: YTRTQFKVIIILAEGAKVPTQMT*DVSILL
Trigger: CAGTAGGATTGAAACATCCAATGTCATCTGGGTGGG...CACCTTCGCTCCTTCCGCCAAGATAATTATCACTTTAAATTGTGTGCGTGTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502536.5
CDS-3UTR CAA 90 bp TGCAGTGAGCTGAGATTGCACCAAAAGAACCAACATGTACTAAAATACCAGTTGGGCTATGACGCAGATTaGGTAGGAACACCTGTCAAG +
Preference number: 5 (lower is better)
Translates to: CSELRLHQKNQHVLKYQLGYDAD*VGTPVK
Trigger: CTTGACAGGTGTTCCTACCAAATCTGCGTCATAGCC...CAACTGGTATTTTAGTACATGTTGGTTCTTTTGGTGCAATCTCAGCTCACTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR CAA 90 bp TGCAGTGAGCTGAGATTGCACCAAAAGAACCAACATGTACTAAAATACCAGTTGGAAGCACCCACACTGTaGTTGGCTATGACGCAGATT +
Preference number: 5 (lower is better)
Translates to: CSELRLHQKNQHVLKYQLEAPTL*LAMTQI
Trigger: AATCTGCGTCATAGCCAACAACAGTGTGGGTGCTTC...CAACTGGTATTTTAGTACATGTTGGTTCTTTTGGTGCAATCTCAGCTCACTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR CAA 90 bp GAGTCTGTGGTGAAAGTTGATGCCAGTTCTGATGATCTCTGGAAATGTTCATGGCTCAGTGGTGACTGTTaGTTAGGGTTGCAGTTACTT +
Preference number: 5 (lower is better)
Translates to: ESVVKVDASSDDLWKCSWLSGDC*LGLQLL
Trigger: AAGTAACTGCAACCCTAACAAACAGTCACCACTGAG...CCATGAACATTTCCAGAGATCATCAGAACTGGCATCAACTTTCACCACAGACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513831.1
CDS CCA 90 bp GTTTTGTGCTGTTGGCTGGTGCTGGAATGGAATGGAGCTCTGAACTaGATGGTTTGTCTAGGTTTTCTACAACTACATTATAGAACAGGA +
Preference number: 5 (lower is better)
Translates to: VLCCWLVLEWNGALN*MVCLGFLQLHYRTG
Trigger: TCCTGTTCTATAATGTAGTTGTAGAAAACCTAGACAAACCATCCAGTTCAGAGCTCCATTCCATTCCAGCACCAGCCAACAGCACAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274276.8
ENST00000513831.1
CDS-3UTR CAA 90 bp AGAGTCCTAGTTTTGAAGTTGGGTAGTAAGCTCATTGGTGCTCGTGACATTATTCTGTCCAGTAGAATCTaGTACACTGACTTCCTCCCA +
Preference number: 5 (lower is better)
Translates to: RVLVLKLGSKLIGARDIILSSRI*YTDFLP
Trigger: TGGGAGGAAGTCAGTGTACAAGATTCTACTGGACAG...AATAATGTCACGAGCACCAATGAGCTTACTACCCAACTTCAAAACTAGGACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502536.5
CDS-3UTR CAA 90 bp TATATTGGTTCAGAGGAGACAAAGCTGCTCCAGAGCCAACACGGAATTTCCCACTACATGTGGATCAAGTaGTTCTCCATGAATCTGTTT +
Preference number: 5 (lower is better)
Translates to: YIGSEETKLLQSQHGISHYMWIK*FSMNLF
Trigger: AAACAGATTCATGGAGAACAACTTGATCCACATGTA...GTGGGAAATTCCGTGTTGGCTCTGGAGCAGCTTTGTCTCCTCTGAACCAATATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR CAA 90 bp GGTGCTTTGCATATATTGGTTTGGGATATATTGGTTCAGAGGAGACAAAGCTGCGCTCCTCAAGTACTTTaGAGACAAAAAGAACGATGC +
Preference number: 5 (lower is better)
Translates to: GALHILVWDILVQRRQSCAPQVL*RQKERC
Trigger: GCATCGTTCTTTTTGTCTCAAAAGTACTTGAGGAGC...GCAGCTTTGTCTCCTCTGAACCAATATATCCCAAACCAATATATGCAAAGCACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR CAA 90 bp GGTGCTTTGCATATATTGGTTTGGGATATATTGGTTCAGAGGAGACAAAGCTGCTCACAAGAAAAGTCCTaGGGCTCCTCAAGTACTTTT +
Preference number: 5 (lower is better)
Translates to: GALHILVWDILVQRRQSCSQEKS*GSSSTF
Trigger: AAAAGTACTTGAGGAGCCCAAGGACTTTTCTTGTGA...GCAGCTTTGTCTCCTCTGAACCAATATATCCCAAACCAATATATGCAAAGCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR CAA 90 bp TGCAGTGAGCTGAGATTGCACCAAAAGAACCAACATGTACTAAAATACCAGTTGGTACAGTGCAAAGTCTaGAAGTCCTCGGTTTCACAA +
Preference number: 5 (lower is better)
Translates to: CSELRLHQKNQHVLKYQLVQCKV*KSSVSQ
Trigger: TTGTGAAACCGAGGACTTCAAGACTTTGCACTGTAC...CAACTGGTATTTTAGTACATGTTGGTTCTTTTGGTGCAATCTCAGCTCACTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR CAA 90 bp GTTCTGATGATCTCTGGAAATGTTCATGGACTCTTTCCAGGTGCAAAGACTGACCATTGGCATGCAGTTTaGATAATGGCTTCCAGAATA +
Preference number: 5 (lower is better)
Translates to: VLMISGNVHGLFPGAKTDHWHAV*IMASRI
Trigger: TATTCTGGAAGCCATTATCAAAACTGCATGCCAATG...GTCAGTCTTTGCACCTGGAAAGAGTCCATGAACATTTCCAGAGATCATCAGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513831.1
CDS-3UTR CAA 90 bp TTGGCAGAGTCTGTGGTGAAAGTTGATGCCAGTTCTGATGATCTCTGGAAATGTTCTGAACTGGATGGTTaGTCTAGGTTTTCTACAACT +
Preference number: 5 (lower is better)
Translates to: LAESVVKVDASSDDLWKCSELDG*SRFSTT
Trigger: AGTTGTAGAAAACCTAGACAAACCATCCAGTTCAGA...ACATTTCCAGAGATCATCAGAACTGGCATCAACTTTCACCACAGACTCTGCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513831.1
CDS-3UTR CAA 90 bp TGTACCAGGTGCTTTGCATATATTGGTTTGGGATATATTGGTTCAGAGGAGACATGCAGTGAGCTGAGATaGCACCAAAAGAACCAACAT +
Preference number: 5 (lower is better)
Translates to: CTRCFAYIGLGYIGSEETCSELR*HQKNQH
Trigger: ATGTTGGTTCTTTTGGTGCAATCTCAGCTCACTGCA...TGTCTCCTCTGAACCAATATATCCCAAACCAATATATGCAAAGCACCTGGTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR CAA 90 bp TGCAGTGAGCTGAGATTGCACCAAAAGAACCAACATGTACTAAAATACCAGTTGGAACCCCTTTCATGCTaGTTTAGAAATGTGACGGCT +
Preference number: 5 (lower is better)
Translates to: CSELRLHQKNQHVLKYQLEPLSC*FRNVTA
Trigger: AGCCGTCACATTTCTAAACAAGCATGAAAGGGGTTC...CAACTGGTATTTTAGTACATGTTGGTTCTTTTGGTGCAATCTCAGCTCACTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR CAA 90 bp TACACACGCACACAATTTAAAGTGATAATTATCTTGGCGGAAGGAGCGAAGGTGTGGGTAGTAAGCTCATaGGTGCTCGTGACATTATTA +
Preference number: 5 (lower is better)
Translates to: YTRTQFKVIIILAEGAKVWVVSS*VLVTLL
Trigger: TAATAATGTCACGAGCACCAATGAGCTTACTACCCA...CACCTTCGCTCCTTCCGCCAAGATAATTATCACTTTAAATTGTGTGCGTGTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502536.5
CDS-3UTR CAA 90 bp ACAGAAGTTATTGTTAGAGTCCTAGTTTTGAAGTTGGGTAGTAAGCTCATTGGTAGTTGCTCCAGAAATTaGGCTCAGGGAACTTGGCAT +
Preference number: 5 (lower is better)
Translates to: TEVIVRVLVLKLGSKLIGSCSRN*AQGTWH
Trigger: ATGCCAAGTTCCCTGAGCCAAATTTCTGGAGCAACT...ACCAATGAGCTTACTACCCAACTTCAAAACTAGGACTCTAACAATAACTTCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502536.5
CDS-3UTR CAA 90 bp TGTACCAGGTGCTTTGCATATATTGGTTTGGGATATATTGGTTCAGAGGAGACAGGCACACTATTCAAGTaGAATGCAGTTACATGTGGA +
Preference number: 5 (lower is better)
Translates to: CTRCFAYIGLGYIGSEETGTLFK*NAVTCG
Trigger: TCCACATGTAACTGCATTCAACTTGAATAGTGTGCC...TGTCTCCTCTGAACCAATATATCCCAAACCAATATATGCAAAGCACCTGGTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR CAA 90 bp AGAGTCCTAGTTTTGAAGTTGGGTAGTAAGCTCATTGGTGCTCGTGACATTATTTCACAAGAAAAGTCCTaGGGCTCCTCAAGTACTTTT +
Preference number: 5 (lower is better)
Translates to: RVLVLKLGSKLIGARDIISQEKS*GSSSTF
Trigger: AAAAGTACTTGAGGAGCCCAAGGACTTTTCTTGTGA...AATAATGTCACGAGCACCAATGAGCTTACTACCCAACTTCAAAACTAGGACTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502536.5
CDS-3UTR CAA 90 bp TTGATGCCAGTTCTGATGATCTCTGGAAATGTTCATGGACTCTTTCCAGGTGCAAACAGGATCTTTCCATaGGCATGCAGTTTTGATAAT +
Preference number: 5 (lower is better)
Translates to: LMPVLMISGNVHGLFPGANRIFP*ACSFDN
Trigger: ATTATCAAAACTGCATGCCAATGGAAAGATCCTGTT...TGCACCTGGAAAGAGTCCATGAACATTTCCAGAGATCATCAGAACTGGCATCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513831.1
CDS-3UTR CAA 90 bp GATGCCAGTTCTGATGATCTCTGGAAATGTTCATGGACTCTTTCCAGGTGCAAATTTTATTCTACAAAGTaGGCAGAGTCTGTGGTGAAA +
Preference number: 5 (lower is better)
Translates to: DASSDDLWKCSWTLSRCKFYSTK*AESVVK
Trigger: TTTCACCACAGACTCTGCCAACTTTGTAGAATAAAA...TTTGCACCTGGAAAGAGTCCATGAACATTTCCAGAGATCATCAGAACTGGCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513831.1
CDS-3UTR CAA 90 bp TGCAGTGAGCTGAGATTGCACCAAAAGAACCAACATGTACTAAAATACCAGTTGGCCTTTTCTTCCGGGTaGTCAATTTTGTATTTGCAA +
Preference number: 5 (lower is better)
Translates to: CSELRLHQKNQHVLKYQLAFSSG*SILYLQ
Trigger: TTGCAAATACAAAATTGACAACCCGGAAGAAAAGGC...CAACTGGTATTTTAGTACATGTTGGTTCTTTTGGTGCAATCTCAGCTCACTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR CAA 90 bp GTTATTGTTAGAGTCCTAGTTTTGAAGTTGGGTAGTAAGCTCATTGGTGCTCGTCTACAGCACATTTACTaGATCACACAGTCTGTGAAA +
Preference number: 5 (lower is better)
Translates to: VIVRVLVLKLGSKLIGARLQHIY*ITQSVK
Trigger: TTTCACAGACTGTGTGATCAAGTAAATGTGCTGTAG...ACGAGCACCAATGAGCTTACTACCCAACTTCAAAACTAGGACTCTAACAATAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502536.5
CDS-3UTR CAA 90 bp ACAGAAGTTATTGTTAGAGTCCTAGTTTTGAAGTTGGGTAGTAAGCTCATTGGTAAAGTGATAATTATCTaGGCGGAAGGAGCGAAGGTG +
Preference number: 5 (lower is better)
Translates to: TEVIVRVLVLKLGSKLIGKVIII*AEGAKV
Trigger: CACCTTCGCTCCTTCCGCCAAGATAATTATCACTTT...ACCAATGAGCTTACTACCCAACTTCAAAACTAGGACTCTAACAATAACTTCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502536.5
CDS GCA 90 bp AAAAAGAACGATGCCTTTCATGCCTTCACTGACATTTCCTTGACTTaGCTCACAATAGATATTTGTCCCTTTATTCCTAATGAAAGGCAC +
Preference number: 5 (lower is better)
Translates to: KKNDAFHAFTDISLT*LTIDICPFIPNERH
Trigger: GTGCCTTTCATTAGGAATAAAGGGACAAATATCTATTGTGAGGCAAGTCAAGGAAATGTCAGTGAAGGCATGAAAGGCATCGTTCTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274276.8
ENST00000502536.5
CDS-3UTR CAA 90 bp GTTATTGTTAGAGTCCTAGTTTTGAAGTTGGGTAGTAAGCTCATTGGTGCTCGTTACATGTGGATCAAGTaGTTCTCCATGAATCTGTTT +
Preference number: 5 (lower is better)
Translates to: VIVRVLVLKLGSKLIGARYMWIK*FSMNLF
Trigger: AAACAGATTCATGGAGAACAACTTGATCCACATGTA...ACGAGCACCAATGAGCTTACTACCCAACTTCAAAACTAGGACTCTAACAATAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502536.5
CDS-3UTR CAA 90 bp ATGACAGAAGTTATTGTTAGAGTCCTAGTTTTGAAGTTGGGTAGTAAGCTCATTGTACAGTGCAAAGTCTaGAAGTCCTCGGTTTCACAA +
Preference number: 5 (lower is better)
Translates to: MTEVIVRVLVLKLGSKLIVQCKV*KSSVSQ
Trigger: TTGTGAAACCGAGGACTTCAAGACTTTGCACTGTAC...AATGAGCTTACTACCCAACTTCAAAACTAGGACTCTAACAATAACTTCTGTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502536.5
CDS-3UTR CAA 90 bp TGTACCAGGTGCTTTGCATATATTGGTTTGGGATATATTGGTTCAGAGGAGACATCCGGGTTGTCAATTTaGTATTTGCAACATTCTGAA +
Preference number: 5 (lower is better)
Translates to: CTRCFAYIGLGYIGSEETSGLSI*YLQHSE
Trigger: TTCAGAATGTTGCAAATACAAAATTGACAACCCGGA...TGTCTCCTCTGAACCAATATATCCCAAACCAATATATGCAAAGCACCTGGTACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR CAA 90 bp GAGCTGAGATTGCACCAAAAGAACCAACATGTACTAAAATACCAGTTGTGTACCAGTGATTCTTTTCTGTaGGAAGGAGATAAAGGTAGT +
Preference number: 5 (lower is better)
Translates to: ELRLHQKNQHVLKYQLCTSDSFL*EGDKGS
Trigger: ACTACCTTTATCTCCTTCCAACAGAAAAGAATCACT...GGTACACAACTGGTATTTTAGTACATGTTGGTTCTTTTGGTGCAATCTCAGCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR CAA 90 bp TGCAGTGAGCTGAGATTGCACCAAAAGAACCAACATGTACTAAAATACCAGTTGTTCACTGTAGTAAGCTaGACAGAAGAATTGTGGAAA +
Preference number: 5 (lower is better)
Translates to: CSELRLHQKNQHVLKYQLFTVVS*TEELWK
Trigger: TTTCCACAATTCTTCTGTCAAGCTTACTACAGTGAA...CAACTGGTATTTTAGTACATGTTGGTTCTTTTGGTGCAATCTCAGCTCACTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR CAA 90 bp GAGCTGAGATTGCACCAAAAGAACCAACATGTACTAAAATACCAGTTGTGTACCGGTGCTTTGCATATATaGGTTTGGGATATATTGGTT +
Preference number: 5 (lower is better)
Translates to: ELRLHQKNQHVLKYQLCTGALHI*VWDILV
Trigger: AACCAATATATCCCAAACCAATATATGCAAAGCACC...GGTACACAACTGGTATTTTAGTACATGTTGGTTCTTTTGGTGCAATCTCAGCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS-3UTR CAA 90 bp ATGATAACTGCCTTTATTGTGTCTGTATTGAAATTCTGGGTTTCCAGCCCAGCAACATATGGCAACAGATaGAATGTAGAAGCAAGTATG +
Preference number: 5 (lower is better)
Translates to: MITAFIVSVLKFWVSSPATYGNR*NVEASM
Trigger: CATACTTGCTTCTACATTCAATCTGTTGCCATATGT...TGCTGGGCTGGAAACCCAGAATTTCAATACAGACACAATAAAGGCAGTTATCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509237.5
CDS-3UTR CAA 90 bp ACAGAAGTTATTGTTAGAGTCCTAGTTTTGAAGTTGGGTAGTAAGCTCATTGGTTTCACTGACATTTCCTaGACTTGCCTCACAATAGAT +
Preference number: 5 (lower is better)
Translates to: TEVIVRVLVLKLGSKLIGFTDIS*TCLTID
Trigger: ATCTATTGTGAGGCAAGTCAAGGAAATGTCAGTGAA...ACCAATGAGCTTACTACCCAACTTCAAAACTAGGACTCTAACAATAACTTCTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502536.5
CDS-3UTR CAA 90 bp ATGACAGAAGTTATTGTTAGAGTCCTAGTTTTGAAGTTGGGTAGTAAGCTCATTGTTAGAGTCCTAGTTTaGAAGTTGGGTAGTAAGCTC +
Preference number: 5 (lower is better)
Translates to: MTEVIVRVLVLKLGSKLIVRVLV*KLGSKL
Trigger: GAGCTTACTACCCAACTTCAAAACTAGGACTCTAAC...AATGAGCTTACTACCCAACTTCAAAACTAGGACTCTAACAATAACTTCTGTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502536.5
CDS TCA 90 bp GAAACATTGTATTGCATCATTTTTCCTTCACCATGGAGTTCAATCTaGCACAAATATGTGAAATTATTCCTTATGGAGTGCACCTTCCAG +
Preference number: 5 (lower is better)
Translates to: ETLYCIIFPSPWSSI*HKYVKLFLMECTFQ
Trigger: CTGGAAGGTGCACTCCATAAGGAATAATTTCACATATTTGTGTCAGATTGAACTCCATGGTGAAGGAAAAATGATGCAATACAATGTTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS CAA 90 bp GGCTGCTGCACTCCCGGTCGCGTCCAGCCGGGATGGGCTGCGAAGTaGTCGGATTCTTTCCCGCACAGCACGGGGCTCGCCCGTCGGAAA +
Preference number: 6 (lower is better)
Translates to: GCCTPGRVQPGWAAK*SDSFPHSTGLARRK
Trigger: TTTCCGACGGGCGAGCCCCGTGCTGTGCGGGAAAGAATCCGACAACTTCGCAGCCCATCCCGGCTGGACGCGACCGGGAGTGCAGCAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS CAA 72 bp ACTCCCGGTCGCGTCCAGCCGGGATGGGCTGCGAAGTaGTCGGATTCTTTCCCGCACAGCACGGGGCTCGCC +
Preference number: 6 (lower is better)
Translates to: TPGRVQPGWAAK*SDSFPHSTGLA
Trigger: GGCGAGCCCCGTGCTGTGCGGGAAAGAATCCGACAACTTCGCAGCCCATCCCGGCTGGACGCGACCGGGAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS GCA 72 bp CTGCTGCACTCCCGGTCGCGTCCAGCCGGGATGGGCTaGGAAGTTGTCGGATTCTTTCCCGCACAGCACGGG +
Preference number: 6 (lower is better)
Translates to: LLHSRSRPAGMG*EVVGFFPAQHG
Trigger: CCCGTGCTGTGCGGGAAAGAATCCGACAACTTCGCAGCCCATCCCGGCTGGACGCGACCGGGAGTGCAGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS CCA 72 bp ACGGGCTGCTGCACTCCCGGTCGCGTCCAGCCGGGATaGGCTGCGAAGTTGTCGGATTCTTTCCCGCACAGC +
Preference number: 6 (lower is better)
Translates to: TGCCTPGRVQPG*AAKLSDSFPHS
Trigger: GCTGTGCGGGAAAGAATCCGACAACTTCGCAGCCCATCCCGGCTGGACGCGACCGGGAGTGCAGCAGCCCGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS CCA 72 bp GCAATTTCCCGTCTTGCTGCGCACTCTTGGCACTCCTaGGACCCACAGGAATTCCCTCCCTTCAGTCCCGGG +
Preference number: 6 (lower is better)
Translates to: AISRLAAHSWHS*DPQEFPPFSPG
Trigger: CCCGGGACTGAAGGGAGGGAATTCCTGTGGGTCCCAGGAGTGCCAAGAGTGCGCAGCAAGACGGGAAATTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502536.5
CDS GCA 72 bp GGGCAGAGGGGTGAGGTCTTTTGCAATTTCCCGTCTTaGTGCGCACTCTTGGCACTCCTGGGACCCACAGGA +
Preference number: 6 (lower is better)
Translates to: GQRGEVFCNFPS*CALLALLGPTG
Trigger: TCCTGTGGGTCCCAGGAGTGCCAAGAGTGCGCAGCAAGACGGGAAATTGCAAAAGACCTCACCCCTCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502536.5
CDS GCA 72 bp CAGAGGGGTGAGGTCTTTTGCAATTTCCCGTCTTGCTaGGCACTCTTGGCACTCCTGGGACCCACAGGAATT +
Preference number: 6 (lower is better)
Translates to: QRGEVFCNFPSC*ALLALLGPTGI
Trigger: AATTCCTGTGGGTCCCAGGAGTGCCAAGAGTGCGCAGCAAGACGGGAAATTGCAAAAGACCTCACCCCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502536.5
CDS CAA 72 bp GAGGTCTTTTGCAATTTCCCGTCTTGCTGCGCACTCTaGGCACTCCTGGGACCCACAGGAATTCCCTCCCTT +
Preference number: 6 (lower is better)
Translates to: EVFCNFPSCCAL*ALLGPTGIPSL
Trigger: AAGGGAGGGAATTCCTGTGGGTCCCAGGAGTGCCAAGAGTGCGCAGCAAGACGGGAAATTGCAAAAGACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502536.5
CDS CCA 72 bp TCTGACCACTCCATTCACTCCATTTCCAGAAGTGGCTaGCATCAGCACACCGTACTCGCGCCATGTACTCTG +
Preference number: 6 (lower is better)
Translates to: SDHSIHSISRSG*HQHTVLAPCTL
Trigger: CAGAGTACATGGCGCGAGTACGGTGTGCTGATGCCAGCCACTTCTGGAAATGGAGTGAATGGAGTGGTCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274276.8
ENST00000513831.1
CDS GCA 72 bp GGGGGAGGCAAGGCAAGACGCAGGGAGACTGCCATTTaGATTTTATACTCTGAACAGTGTGGTGCCTCTACT +
Preference number: 6 (lower is better)
Translates to: GGGKARRRETAI*ILYSEQCGAST
Trigger: AGTAGAGGCACCACACTGTTCAGAGTATAAAATGCAAATGGCAGTCTCCCTGCGTCTTGCCTTGCCTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS CCA 72 bp TGGCATCAGCACACCGTACTCGCGCCATGTACTCTGTaGCAGGTTCCAGTTCACTTAAGAAGTACTCACCGT +
Preference number: 6 (lower is better)
Translates to: WHQHTVLAPCTL*QVPVHLRSTHR
Trigger: ACGGTGAGTACTTCTTAAGTGAACTGGAACCTGCCACAGAGTACATGGCGCGAGTACGGTGTGCTGATGCCA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS CAA 90 bp CCCAAGGCAGTGTCCGTCCCAGGATCCCAAGTACAGTGCAAAGTCTaGAAGTCCTCGGTTTCACAAGAAAAGTCCTTGGGCTCCTCAAGT +
Preference number: 6 (lower is better)
Translates to: PKAVSVPGSQVQCKV*KSSVSQEKSLGSSS
Trigger: ACTTGAGGAGCCCAAGGACTTTTCTTGTGAAACCGAGGACTTCAAGACTTTGCACTGTACTTGGGATCCTGGGACGGACACTGCCTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274276.8
ENST00000502536.5
CDS CCA 72 bp GACTTCCTCCCAGGAACTCCAGTTGCTCCAGAAATTTaGCTCAGGGAACTTGGCATCGTCCACCAAACTCTT +
Preference number: 6 (lower is better)
Translates to: DFLPGTPVAPEI*LRELGIVHQTL
Trigger: AAGAGTTTGGTGGACGATGCCAAGTTCCCTGAGCCAAATTTCTGGAGCAACTGGAGTTCCTGGGAGGAAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274276.8
ENST00000502536.5
CDS CAA 72 bp GTGTCCGTCCCAGGATCCCAAGTACAGTGCAAAGTCTaGAAGTCCTCGGTTTCACAAGAAAAGTCCTTGGGC +
Preference number: 6 (lower is better)
Translates to: VSVPGSQVQCKV*KSSVSQEKSLG
Trigger: GCCCAAGGACTTTTCTTGTGAAACCGAGGACTTCAAGACTTTGCACTGTACTTGGGATCCTGGGACGGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274276.8
ENST00000502536.5
CDS CAA 90 bp GGTATGGTCACACCAGTCCACAACATAGCCTATAACATCTCCAGGTaGGGGTTTCCAAGACAGAGAGAATCCACCCTCTGTGCCTGCAAT +
Preference number: 6 (lower is better)
Translates to: GMVTPVHNIAYNISR*GFPRQRESTLCACN
Trigger: ATTGCAGGCACAGAGGGTGGATTCTCTCTGTCTTGGAAACCCCAACCTGGAGATGTTATAGGCTATGTTGTGGACTGGTGTGACCATACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS TCA 72 bp ATGAGCAAGACGCAGAAAACCATGGGCAGTAGGATATaGATCAGCATCGAGGAGTGTTCATCCGGAGTCGTG +
Preference number: 6 (lower is better)
Translates to: MSKTQKTMGSRI*ISIEECSSGVV
Trigger: CACGACTCCGGATGAACACTCCTCGATGCTGATTCATATCCTACTGCCCATGGTTTTCTGCGTCTTGCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS CCA 72 bp ACTGTGCTTGTGGTATTGGGACCTACATTCTTCCACTaGAAATCACCGAGCACATCCTGGGTATGGTCACAC +
Preference number: 6 (lower is better)
Translates to: TVLVVLGPTFFH*KSPSTSWVWSH
Trigger: GTGTGACCATACCCAGGATGTGCTCGGTGATTTCCAGTGGAAGAATGTAGGTCCCAATACCACAAGCACAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS CAA 72 bp GAATCTTGTACACTGACTTCCTCCCAGGAACTCCAGTaGCTCCAGAAATTTGGCTCAGGGAACTTGGCATCG +
Preference number: 6 (lower is better)
Translates to: ESCTLTSSQELQ*LQKFGSGNLAS
Trigger: CGATGCCAAGTTCCCTGAGCCAAATTTCTGGAGCAACTGGAGTTCCTGGGAGGAAGTCAGTGTACAAGATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274276.8
ENST00000502536.5
CDS CAA 90 bp TGTCCAGTAGAATCTTGTACACTGACTTCCTCCCAGGAACTCCAGTaGCTCCAGAAATTTGGCTCAGGGAACTTGGCATCGTCCACCAAA +
Preference number: 6 (lower is better)
Translates to: CPVESCTLTSSQELQ*LQKFGSGNLASSTK
Trigger: TTTGGTGGACGATGCCAAGTTCCCTGAGCCAAATTTCTGGAGCAACTGGAGTTCCTGGGAGGAAGTCAGTGTACAAGATTCTACTGGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274276.8
ENST00000502536.5
CDS TCA 72 bp AAGACGCAGGGAGACTGCCATTTGCATTTTATACTCTaGACAGTGTGGTGCCTCTACTGGGTTTGTTGGGAG +
Preference number: 6 (lower is better)
Translates to: KTQGDCHLHFIL*TVWCLYWVCWE
Trigger: CTCCCAACAAACCCAGTAGAGGCACCACACTGTTCAGAGTATAAAATGCAAATGGCAGTCTCCCTGCGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS CAA 72 bp CGCAGATTTGGTAGGAACACCTGTCAAGGATTAGTTTaGTGCTGTTGGCTGGTGCTGGAATGGAATGGAGCT +
Preference number: 6 (lower is better)
Translates to: RRFGRNTCQGLV*CCWLVLEWNGA
Trigger: AGCTCCATTCCATTCCAGCACCAGCCAACAGCACAAAACTAATCCTTGACAGGTGTTCCTACCAAATCTGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274276.8
ENST00000513831.1
CDS CAA 72 bp ACACCAGTCCACAACATAGCCTATAACATCTCCAGGTaGGGGTTTCCAAGACAGAGAGAATCCACCCTCTGT +
Preference number: 6 (lower is better)
Translates to: TPVHNIAYNISR*GFPRQRESTLC
Trigger: ACAGAGGGTGGATTCTCTCTGTCTTGGAAACCCCAACCTGGAGATGTTATAGGCTATGTTGTGGACTGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS CAA 72 bp TATACTCTGAACAGTGTGGTGCCTCTACTGGGTTTGTaGGGAGACTGTCCTTGTCTCCAAACATGGGTGAAG +
Preference number: 6 (lower is better)
Translates to: YTLNSVVPLLGL*GDCPCLQTWVK
Trigger: CTTCACCCATGTTTGGAGACAAGGACAGTCTCCCAACAAACCCAGTAGAGGCACCACACTGTTCAGAGTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS CAA 90 bp TTTGCATTTTATACTCTGAACAGTGTGGTGCCTCTACTGGGTTTGTaGGGAGACTGTCCTTGTCTCCAAACATGGGTGAAGCCAACTGGG +
Preference number: 6 (lower is better)
Translates to: FAFYTLNSVVPLLGL*GDCPCLQTWVKPTG
Trigger: CCCAGTTGGCTTCACCCATGTTTGGAGACAAGGACAGTCTCCCAACAAACCCAGTAGAGGCACCACACTGTTCAGAGTATAAAATGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS CAA 90 bp CCATTTGCATTTTATACTCTGAACAGTGTGGTGCCTCTACTGGGTTaGTTGGGAGACTGTCCTTGTCTCCAAACATGGGTGAAGCCAACT +
Preference number: 6 (lower is better)
Translates to: PFAFYTLNSVVPLLG*LGDCPCLQTWVKPT
Trigger: AGTTGGCTTCACCCATGTTTGGAGACAAGGACAGTCTCCCAACAAACCCAGTAGAGGCACCACACTGTTCAGAGTATAAAATGCAAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS TCA 72 bp CCACGGTGGGCTGTGACAACTCTAGTCTCACCTCGATaGGTCAGGTTAAAAAGGATATTGACACTTCTCTTC +
Preference number: 6 (lower is better)
Translates to: PRWAVTTLVSPR*VRLKRILTLLF
Trigger: GAAGAGAAGTGTCAATATCCTTTTTAACCTGACTCATCGAGGTGAGACTAGAGTTGTCACAGCCCACCGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502536.5
CDS GCA 72 bp TACTGGAACATGGCCACAAGAGCCAGAGTCAGAAGCTaGCTGGTTATAGGTCAAGTTCTCAAAACAGATGCA +
Preference number: 6 (lower is better)
Translates to: YWNMATRARVRS*LVIGQVLKTDA
Trigger: TGCATCTGTTTTGAGAACTTGACCTATAACCAGGCAGCTTCTGACTCTGGCTCTTGTGGCCATGTTCCAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS CCA 72 bp GAACGTAGCACTGGGGCCTTCACCAGCACTAGTGAATaGAGTGATGAAAAACTCATAGAAGGATTCTGGCTT +
Preference number: 6 (lower is better)
Translates to: ERSTGAFTSTSE*SDEKLIEGFWL
Trigger: AAGCCAGAATCCTTCTATGAGTTTTTCATCACTCCATTCACTAGTGCTGGTGAAGGCCCCAGTGCTACGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS CAA 72 bp CTAAAAGCATCTGTGCTAATGACTGTGCTTGTGGTATaGGGACCTACATTCTTCCACTGGAAATCACCGAGC +
Preference number: 6 (lower is better)
Translates to: LKASVLMTVLVV*GPTFFHWKSPS
Trigger: GCTCGGTGATTTCCAGTGGAAGAATGTAGGTCCCAATACCACAAGCACAGTCATTAGCACAGATGCTTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS CAA 90 bp TGGGTGGCACTGCCTCGCCTTGGATTTCAGATAGACATGGTACCCTaGTATAAAACCAGGTTGAGATTCAGTAGAGTAATCTTTCCAACT +
Preference number: 6 (lower is better)
Translates to: WVALPRLGFQIDMVP*YKTRLRFSRVIFPT
Trigger: AGTTGGAAAGATTACTCTACTGAATCTCAACCTGGTTTTATACAAGGGTACCATGTCTATCTGAAATCCAAGGCGAGGCAGTGCCACCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS CAA 90 bp AGTGACTTCCTAGTGCCTAGGAACTGTATCTTTGTCCCTTCTGGCTaGCTTACAACTTCAATAGCATCTGGGATACAGTCACTGACATTC +
Preference number: 6 (lower is better)
Translates to: SDFLVPRNCIFVPSG*LTTSIASGIQSLTF
Trigger: GAATGTCAGTGACTGTATCCCAGATGCTATTGAAGTTGTAAGCAAGCCAGAAGGGACAAAGATACAGTTCCTAGGCACTAGGAAGTCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS TCA 72 bp GTTTGTTGGGAGACTGTCCTTGTCTCCAAACATGGGTaGAGCCAACTGGGACACATAATTCAAACTTGTTTC +
Preference number: 6 (lower is better)
Translates to: VCWETVLVSKHG*SQLGHIIQTCF
Trigger: GAAACAAGTTTGAATTATGTGTCCCAGTTGGCTTCACCCATGTTTGGAGACAAGGACAGTCTCCCAACAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS CCA 72 bp ATTAGTTTTGTGCTGTTGGCTGGTGCTGGAATGGAATaGAGCTCTGAACTGGATGGTTTGTCTAGGTTTTCT +
Preference number: 6 (lower is better)
Translates to: ISFVLLAGAGME*SSELDGLSRFS
Trigger: AGAAAACCTAGACAAACCATCCAGTTCAGAGCTCCATTCCATTCCAGCACCAGCCAACAGCACAAAACTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274276.8
ENST00000513831.1
CDS CAA 72 bp AGGGAAAACGAACAATATATCCTGTCCAGTAGAATCTaGTACACTGACTTCCTCCCAGGAACTCCAGTTGCT +
Preference number: 6 (lower is better)
Translates to: RENEQYILSSRI*YTDFLPGTPVA
Trigger: AGCAACTGGAGTTCCTGGGAGGAAGTCAGTGTACAAGATTCTACTGGACAGGATATATTGTTCGTTTTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274276.8
ENST00000502536.5
CDS CAA 72 bp CTAGTGCCTAGGAACTGTATCTTTGTCCCTTCTGGCTaGCTTACAACTTCAATAGCATCTGGGATACAGTCA +
Preference number: 6 (lower is better)
Translates to: LVPRNCIFVPSG*LTTSIASGIQS
Trigger: TGACTGTATCCCAGATGCTATTGAAGTTGTAAGCAAGCCAGAAGGGACAAAGATACAGTTCCTAGGCACTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS TCA 72 bp GGAAGGTTGTGGACAGTCCATTGTAAGTGCAAACTCTaGCGCGTAGAATTGGTGGAAACTTTAAGTGATACA +
Preference number: 6 (lower is better)
Translates to: GRLWTVHCKCKL*RVELVETLSDT
Trigger: TGTATCACTTAAAGTTTCCACCAATTCTACGCGTCAGAGTTTGCACTTACAATGGACTGTCCACAACCTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274276.8
ENST00000502536.5
CDS CCA 72 bp AACTCCAGTTGCTCCAGAAATTTGGCTCAGGGAACTTaGCATCGTCCACCAAACTCTTTATTCTTACAAAGT +
Preference number: 6 (lower is better)
Translates to: NSSCSRNLAQGT*HRPPNSLFLQS
Trigger: ACTTTGTAAGAATAAAGAGTTTGGTGGACGATGCCAAGTTCCCTGAGCCAAATTTCTGGAGCAACTGGAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274276.8
ENST00000502536.5
CDS CCA 72 bp TGTTGGCTGGTGCTGGAATGGAATGGAGCTCTGAACTaGATGGTTTGTCTAGGTTTTCTACAACTACATTAT +
Preference number: 6 (lower is better)
Translates to: CWLVLEWNGALN*MVCLGFLQLHY
Trigger: ATAATGTAGTTGTAGAAAACCTAGACAAACCATCCAGTTCAGAGCTCCATTCCATTCCAGCACCAGCCAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274276.8
ENST00000513831.1
CDS CAA 72 bp CTGCCTCGCCTTGGATTTCAGATAGACATGGTACCCTaGTATAAAACCAGGTTGAGATTCAGTAGAGTAATC +
Preference number: 6 (lower is better)
Translates to: LPRLGFQIDMVP*YKTRLRFSRVI
Trigger: GATTACTCTACTGAATCTCAACCTGGTTTTATACAAGGGTACCATGTCTATCTGAAATCCAAGGCGAGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS CAA 90 bp CTTATCTTTAGGGAAAACGAACAATATATCCTGTCCAGTAGAATCTaGTACACTGACTTCCTCCCAGGAACTCCAGTTGCTCCAGAAATT +
Preference number: 6 (lower is better)
Translates to: LIFRENEQYILSSRI*YTDFLPGTPVAPEI
Trigger: AATTTCTGGAGCAACTGGAGTTCCTGGGAGGAAGTCAGTGTACAAGATTCTACTGGACAGGATATATTGTTCGTTTTCCCTAAAGATAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274276.8
ENST00000502536.5
CDS TCA 72 bp TTCCTTCACCATGGAGTTCAATCTGACACAAATATGTaGAATTATTCCTTATGGAGTGCACCTTCCAGGTCA +
Preference number: 6 (lower is better)
Translates to: FLHHGVQSDTNM*NYSLWSAPSRS
Trigger: TGACCTGGAAGGTGCACTCCATAAGGAATAATTTCACATATTTGTGTCAGATTGAACTCCATGGTGAAGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS CAA 90 bp GATTCTGGCTTTAGGTTGTCCACAATCAATGCCTTTTCTTCCGGGTaGTCAATTTTGTATTTGCAACATTCTGAACCATCTGAAAGAACT +
Preference number: 6 (lower is better)
Translates to: DSGFRLSTINAFSSG*SILYLQHSEPSERT
Trigger: AGTTCTTTCAGATGGTTCAGAATGTTGCAAATACAAAATTGACAACCCGGAAGAAAAGGCATTGATTGTGGACAACCTAAAGCCAGAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS CAA 90 bp GAAAGGCACACTATTCAAGTTGAATGCAGTTACATGTGGATCAAGTaGTTCTCCATGAATCTGTTTCCCTTCCAAATAACAGGATACATT +
Preference number: 6 (lower is better)
Translates to: ERHTIQVECSYMWIK*FSMNLFPFQITGYI
Trigger: AATGTATCCTGTTATTTGGAAGGGAAACAGATTCATGGAGAACAACTTGATCCACATGTAACTGCATTCAACTTGAATAGTGTGCCTTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274276.8
ENST00000502536.5
CDS CAA 90 bp TTTAGGTTGTCCACAATCAATGCCTTTTCTTCCGGGTTGTCAATTTaGTATTTGCAACATTCTGAACCATCTGAAAGAACTGCCTTTTCA +
Preference number: 6 (lower is better)
Translates to: FRLSTINAFSSGLSI*YLQHSEPSERTAFS
Trigger: TGAAAAGGCAGTTCTTTCAGATGGTTCAGAATGTTGCAAATACAAAATTGACAACCCGGAAGAAAAGGCATTGATTGTGGACAACCTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS CAA 72 bp TTTAGGTTGTCCACAATCAATGCCTTTTCTTCCGGGTaGTCAATTTTGTATTTGCAACATTCTGAACCATCT +
Preference number: 6 (lower is better)
Translates to: FRLSTINAFSSG*SILYLQHSEPS
Trigger: AGATGGTTCAGAATGTTGCAAATACAAAATTGACAACCCGGAAGAAAAGGCATTGATTGTGGACAACCTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274276.8
CDS CAA 90 bp TTCTCCATGAATCTGTTTCCCTTCCAAATAACAGGATACATTATTTaGAATGTTCCTAGAAACGTAACAAATGGTAACATTGGTGCCTTC +
Preference number: 6 (lower is better)
Translates to: FSMNLFPFQITGYII*NVPRNVTNGNIGAF
Trigger: GAAGGCACCAATGTTACCATTTGTTACGTTTCTAGGAACATTCAAAATAATGTATCCTGTTATTTGGAAGGGAAACAGATTCATGGAGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274276.8
ENST00000502536.5