RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OSGIN2 (Homo sapiens)

Ensembl gene IDs: ENSG00000164823

Ensembl transcript IDs: ENST00000297438.6, ENST00000451899.7, ENST00000520659.1, ENST00000647849.1

Found 221 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTGTTTGCCAGACACCAAGCCAGGCATCGAGGGATAAGGAGGAGATaGTCACATCATGCTATAACTAGACAAGTATTTAGTGATTCTTCC +
Preference number: 1 (lower is better)
Translates to: LFARHQARHRGIRRR*SHHAITRQVFSDSS
Trigger: GGAAGAATCACTAAATACTTGTCTAGTTATAGCATGATGTGAGCATCTCCTCCTTATCCCTCGATGCCTGGCTTGGTGTCTGGCAAACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
3UTR GCA 90 bp GGACAGAAATTTATAGAACATGAGAGTATAGTATATCAGAGAAAATaGCCAAATGTTATATACTACACAGGACAGCTTGGATTGAGGAAG +
Preference number: 1 (lower is better)
Translates to: GQKFIEHESIVYQRK*PNVIYYTGQLGLRK
Trigger: CTTCCTCAATCCAAGCTGTCCTGTGTAGTATATAACATTTGGGCATTTTCTCTGATATACTATACTCTCATGTTCTATAAATTTCTGTCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
3UTR-3UTR GCA 90 bp GGACTGTTTGCCAGACACCAAGCCAGGCATCGAGGGATAAGGAGGAGATGCTCAAATCTGAGTTGTAAATaGCTCCTACCCTCACCCCAC +
Preference number: 2 (lower is better)
Translates to: GLFARHQARHRGIRRRCSNLSCK*LLPSPH
Trigger: GTGGGGTGAGGGTAGGAGGCATTTACAACTCAGATT...TGAGCATCTCCTCCTTATCCCTCGATGCCTGGCTTGGTGTCTGGCAAACAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
3UTR-3UTR CCA 90 bp GGACTGTTTGCCAGACACCAAGCCAGGCATCGAGGGATAAGGAGGAGATGCTCACTACACAGGACAGCTTaGATTGAGGAAGAACTCAGG +
Preference number: 2 (lower is better)
Translates to: GLFARHQARHRGIRRRCSLHRTA*IEEELR
Trigger: CCTGAGTTCTTCCTCAATCCAAGCTGTCCTGTGTAG...TGAGCATCTCCTCCTTATCCCTCGATGCCTGGCTTGGTGTCTGGCAAACAGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
3UTR-3UTR CCA 90 bp GGACTGTTTGCCAGACACCAAGCCAGGCATCGAGGGATAAGGAGGAGATGCTCAGCAGGAAGTAAGTTGTaGGGCCTGAGAGTTTACATT +
Preference number: 2 (lower is better)
Translates to: GLFARHQARHRGIRRRCSAGSKL*GLRVYI
Trigger: AATGTAAACTCTCAGGCCCCACAACTTACTTCCTGC...TGAGCATCTCCTCCTTATCCCTCGATGCCTGGCTTGGTGTCTGGCAAACAGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
3UTR-3UTR TCA 90 bp GGACTGTTTGCCAGACACCAAGCCAGGCATCGAGGGATAAGGAGGAGATGCTCAGTAAGTTGTGGGGCCTaGGAGTTTACATTTCTAACA +
Preference number: 2 (lower is better)
Translates to: GLFARHQARHRGIRRRCSVSCGA*EFTFLT
Trigger: TGTTAGAAATGTAAACTCTCAGGCCCCACAACTTAC...TGAGCATCTCCTCCTTATCCCTCGATGCCTGGCTTGGTGTCTGGCAAACAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
3UTR-3UTR TCA 90 bp GGACTGTTTGCCAGACACCAAGCCAGGCATCGAGGGATAAGGAGGAGATGCTCAGATTCTTCCCTTCCATaGATAGCTATAGCTGATAGC +
Preference number: 2 (lower is better)
Translates to: GLFARHQARHRGIRRRCSDSSLP*IAIADS
Trigger: GCTATCAGCTATAGCTATTCATGGAAGGGAAGAATC...TGAGCATCTCCTCCTTATCCCTCGATGCCTGGCTTGGTGTCTGGCAAACAGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
3UTR-3UTR GCA 90 bp TTTGCCAGACACCAAGCCAGGCATCGAGGGATAAGGAGGAGATGCTCACATCATAATCTGAGTTGTAAATaGCTCCTACCCTCACCCCAC +
Preference number: 2 (lower is better)
Translates to: FARHQARHRGIRRRCSHHNLSCK*LLPSPH
Trigger: GTGGGGTGAGGGTAGGAGGCATTTACAACTCAGATT...ATGATGTGAGCATCTCCTCCTTATCCCTCGATGCCTGGCTTGGTGTCTGGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
3UTR-3UTR CCA 90 bp TTTGCCAGACACCAAGCCAGGCATCGAGGGATAAGGAGGAGATGCTCACATCATGCAGGAAGTAAGTTGTaGGGCCTGAGAGTTTACATT +
Preference number: 2 (lower is better)
Translates to: FARHQARHRGIRRRCSHHAGSKL*GLRVYI
Trigger: AATGTAAACTCTCAGGCCCCACAACTTACTTCCTGC...ATGATGTGAGCATCTCCTCCTTATCCCTCGATGCCTGGCTTGGTGTCTGGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
3UTR-3UTR TCA 90 bp GGACTGTTTGCCAGACACCAAGCCAGGCATCGAGGGATAAGGAGGAGATGCTCATGTCTCAAATTTTTATaGGCATACATATCCCTTGGG +
Preference number: 2 (lower is better)
Translates to: GLFARHQARHRGIRRRCSCLKFL*AYISLG
Trigger: CCCAAGGGATATGTATGCTCATAAAAATTTGAGACA...TGAGCATCTCCTCCTTATCCCTCGATGCCTGGCTTGGTGTCTGGCAAACAGTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
3UTR-3UTR TCA 90 bp TTTGCCAGACACCAAGCCAGGCATCGAGGGATAAGGAGGAGATGCTCACATCATATAACTGTGGACTTTTaGGACACAAGGGGATGTCAA +
Preference number: 2 (lower is better)
Translates to: FARHQARHRGIRRRCSHHITVDF*DTRGCQ
Trigger: TTGACATCCCCTTGTGTCTCAAAAGTCCACAGTTAT...ATGATGTGAGCATCTCCTCCTTATCCCTCGATGCCTGGCTTGGTGTCTGGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
3UTR-3UTR TCA 90 bp ACATCTGCTAATTATGGACTGTTTGCCAGACACCAAGCCAGGCATCGAGGGATACAGGACAGCTTGGATTaGGGAAGAACTCAGGAAATG +
Preference number: 2 (lower is better)
Translates to: TSANYGLFARHQARHRGIQDSLD*GRTQEM
Trigger: CATTTCCTGAGTTCTTCCTCAATCCAAGCTGTCCTG...TATCCCTCGATGCCTGGCTTGGTGTCTGGCAAACAGTCCATAATTAGCAGATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
3UTR-3UTR TCA 90 bp TTTGCCAGACACCAAGCCAGGCATCGAGGGATAAGGAGGAGATGCTCACATCATGATTCTTCCCTTCCATaGATAGCTATAGCTGATAGC +
Preference number: 2 (lower is better)
Translates to: FARHQARHRGIRRRCSHHDSSLP*IAIADS
Trigger: GCTATCAGCTATAGCTATTCATGGAAGGGAAGAATC...ATGATGTGAGCATCTCCTCCTTATCCCTCGATGCCTGGCTTGGTGTCTGGCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
3UTR-3UTR GCA 90 bp GGACTGTTTGCCAGACACCAAGCCAGGCATCGAGGGATAAGGAGGAGATGCTCAAACCATGATATGAGCTaGTATGTCATCTCGAATGAA +
Preference number: 2 (lower is better)
Translates to: GLFARHQARHRGIRRRCSNHDMS*YVISNE
Trigger: TTCATTCGAGATGACATAGCAGCTCATATCATGGTT...TGAGCATCTCCTCCTTATCCCTCGATGCCTGGCTTGGTGTCTGGCAAACAGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
3UTR-3UTR CCA 90 bp ACATCTGCTAATTATGGACTGTTTGCCAGACACCAAGCCAGGCATCGAGGGATACTACACAGGACAGCTTaGATTGAGGAAGAACTCAGG +
Preference number: 2 (lower is better)
Translates to: TSANYGLFARHQARHRGILHRTA*IEEELR
Trigger: CCTGAGTTCTTCCTCAATCCAAGCTGTCCTGTGTAG...TATCCCTCGATGCCTGGCTTGGTGTCTGGCAAACAGTCCATAATTAGCAGATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
3UTR-3UTR TCA 90 bp TTTGCCAGACACCAAGCCAGGCATCGAGGGATAAGGAGGAGATGCTCACATCATGAAGTTACTATAGTTTaGGGCTCTCCTTCAGTTAAC +
Preference number: 2 (lower is better)
Translates to: FARHQARHRGIRRRCSHHEVTIV*GSPSVN
Trigger: GTTAACTGAAGGAGAGCCTCAAACTATAGTAACTTC...ATGATGTGAGCATCTCCTCCTTATCCCTCGATGCCTGGCTTGGTGTCTGGCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
3UTR-3UTR TCA 90 bp CTTTCAACATCTGCTAATTATGGACTGTTTGCCAGACACCAAGCCAGGCATCGACAGGACAGCTTGGATTaGGGAAGAACTCAGGAAATG +
Preference number: 2 (lower is better)
Translates to: LSTSANYGLFARHQARHRQDSLD*GRTQEM
Trigger: CATTTCCTGAGTTCTTCCTCAATCCAAGCTGTCCTG...TCGATGCCTGGCTTGGTGTCTGGCAAACAGTCCATAATTAGCAGATGTTGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
3UTR-3UTR GCA 90 bp CTTTCAACATCTGCTAATTATGGACTGTTTGCCAGACACCAAGCCAGGCATCGAAATCTGAGTTGTAAATaGCTCCTACCCTCACCCCAC +
Preference number: 2 (lower is better)
Translates to: LSTSANYGLFARHQARHRNLSCK*LLPSPH
Trigger: GTGGGGTGAGGGTAGGAGGCATTTACAACTCAGATT...TCGATGCCTGGCTTGGTGTCTGGCAAACAGTCCATAATTAGCAGATGTTGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
3UTR-3UTR CCA 90 bp TTTGCCAGACACCAAGCCAGGCATCGAGGGATAAGGAGGAGATGCTCACATCATATCTTGGTGAGTTCTTaGATGTCAAAGTGTATACCA +
Preference number: 2 (lower is better)
Translates to: FARHQARHRGIRRRCSHHILVSS*MSKCIP
Trigger: TGGTATACACTTTGACATCCAAGAACTCACCAAGAT...ATGATGTGAGCATCTCCTCCTTATCCCTCGATGCCTGGCTTGGTGTCTGGCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
3UTR-3UTR TCA 90 bp CTTTCAACATCTGCTAATTATGGACTGTTTGCCAGACACCAAGCCAGGCATCGAATAACTGTGGACTTTTaGGACACAAGGGGATGTCAA +
Preference number: 2 (lower is better)
Translates to: LSTSANYGLFARHQARHRITVDF*DTRGCQ
Trigger: TTGACATCCCCTTGTGTCTCAAAAGTCCACAGTTAT...TCGATGCCTGGCTTGGTGTCTGGCAAACAGTCCATAATTAGCAGATGTTGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
3UTR-3UTR GCA 90 bp TTTGCCAGACACCAAGCCAGGCATCGAGGGATAAGGAGGAGATGCTCACATCATTTCACCAGATTTATTTaGAGCTCCACTGAACTTTTA +
Preference number: 2 (lower is better)
Translates to: FARHQARHRGIRRRCSHHFTRFI*SSTELL
Trigger: TAAAAGTTCAGTGGAGCTGCAAATAAATCTGGTGAA...ATGATGTGAGCATCTCCTCCTTATCCCTCGATGCCTGGCTTGGTGTCTGGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
3UTR-3UTR GCA 90 bp CTTTCAACATCTGCTAATTATGGACTGTTTGCCAGACACCAAGCCAGGCATCGAGGGATAAGGAGGAGATaGTCACATCATGCTATAACT +
Preference number: 2 (lower is better)
Translates to: LSTSANYGLFARHQARHRGIRRR*SHHAIT
Trigger: AGTTATAGCATGATGTGAGCATCTCCTCCTTATCCC...TCGATGCCTGGCTTGGTGTCTGGCAAACAGTCCATAATTAGCAGATGTTGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
3UTR-3UTR TCA 90 bp CTTTCAACATCTGCTAATTATGGACTGTTTGCCAGACACCAAGCCAGGCATCGAGAAGTTACTATAGTTTaGGGCTCTCCTTCAGTTAAC +
Preference number: 2 (lower is better)
Translates to: LSTSANYGLFARHQARHREVTIV*GSPSVN
Trigger: GTTAACTGAAGGAGAGCCTCAAACTATAGTAACTTC...TCGATGCCTGGCTTGGTGTCTGGCAAACAGTCCATAATTAGCAGATGTTGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
3UTR-3UTR TCA 90 bp ACATCTGCTAATTATGGACTGTTTGCCAGACACCAAGCCAGGCATCGAGGGATATCCAATAAACAACCATaGTATGAGCTGCTATGTCAT +
Preference number: 2 (lower is better)
Translates to: TSANYGLFARHQARHRGISNKQP*YELLCH
Trigger: ATGACATAGCAGCTCATATCATGGTTGTTTATTGGA...TATCCCTCGATGCCTGGCTTGGTGTCTGGCAAACAGTCCATAATTAGCAGATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
3UTR-3UTR TCA 90 bp CTTTCAACATCTGCTAATTATGGACTGTTTGCCAGACACCAAGCCAGGCATCGATGTCTCAAATTTTTATaGGCATACATATCCCTTGGG +
Preference number: 2 (lower is better)
Translates to: LSTSANYGLFARHQARHRCLKFL*AYISLG
Trigger: CCCAAGGGATATGTATGCTCATAAAAATTTGAGACA...TCGATGCCTGGCTTGGTGTCTGGCAAACAGTCCATAATTAGCAGATGTTGAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
3UTR-3UTR TCA 90 bp CTTTCAACATCTGCTAATTATGGACTGTTTGCCAGACACCAAGCCAGGCATCGATCCAATAAACAACCATaGTATGAGCTGCTATGTCAT +
Preference number: 2 (lower is better)
Translates to: LSTSANYGLFARHQARHRSNKQP*YELLCH
Trigger: ATGACATAGCAGCTCATATCATGGTTGTTTATTGGA...TCGATGCCTGGCTTGGTGTCTGGCAAACAGTCCATAATTAGCAGATGTTGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
3UTR-3UTR GCA 90 bp CTTTCAACATCTGCTAATTATGGACTGTTTGCCAGACACCAAGCCAGGCATCGATTCACCAGATTTATTTaGAGCTCCACTGAACTTTTA +
Preference number: 2 (lower is better)
Translates to: LSTSANYGLFARHQARHRFTRFI*SSTELL
Trigger: TAAAAGTTCAGTGGAGCTGCAAATAAATCTGGTGAA...TCGATGCCTGGCTTGGTGTCTGGCAAACAGTCCATAATTAGCAGATGTTGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
3UTR-3UTR TCA 90 bp CTGAAGCAAGTGCAGTCAGAGAATGTTATTTCATTAAGATGTGAAACTGGTTTGGTAAGTTGTGGGGCCTaGGAGTTTACATTTCTAACA +
Preference number: 2 (lower is better)
Translates to: LKQVQSENVISLRCETGLVSCGA*EFTFLT
Trigger: TGTTAGAAATGTAAACTCTCAGGCCCCACAACTTAC...CAAACCAGTTTCACATCTTAATGAAATAACATTCTCTGACTGCACTTGCTTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
3UTR-3UTR CCA 90 bp AGAGTACTGAAGCAAGTGCAGTCAGAGAATGTTATTTCATTAAGATGTGAAACTGCAGGAAGTAAGTTGTaGGGCCTGAGAGTTTACATT +
Preference number: 2 (lower is better)
Translates to: RVLKQVQSENVISLRCETAGSKL*GLRVYI
Trigger: AATGTAAACTCTCAGGCCCCACAACTTACTTCCTGC...AGTTTCACATCTTAATGAAATAACATTCTCTGACTGCACTTGCTTCAGTACTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
3UTR-3UTR TCA 90 bp CTGAAGCAAGTGCAGTCAGAGAATGTTATTTCATTAAGATGTGAAACTGGTTTGGAAGTTACTATAGTTTaGGGCTCTCCTTCAGTTAAC +
Preference number: 2 (lower is better)
Translates to: LKQVQSENVISLRCETGLEVTIV*GSPSVN
Trigger: GTTAACTGAAGGAGAGCCTCAAACTATAGTAACTTC...CAAACCAGTTTCACATCTTAATGAAATAACATTCTCTGACTGCACTTGCTTCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
3UTR-3UTR GCA 90 bp CTGAAGCAAGTGCAGTCAGAGAATGTTATTTCATTAAGATGTGAAACTGGTTTGAACCATGATATGAGCTaGTATGTCATCTCGAATGAA +
Preference number: 2 (lower is better)
Translates to: LKQVQSENVISLRCETGLNHDMS*YVISNE
Trigger: TTCATTCGAGATGACATAGCAGCTCATATCATGGTT...CAAACCAGTTTCACATCTTAATGAAATAACATTCTCTGACTGCACTTGCTTCAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
3UTR-3UTR GCA 90 bp CTGAAGCAAGTGCAGTCAGAGAATGTTATTTCATTAAGATGTGAAACTGGTTTGCTGAAAAATTCAATTTaGCATGGAGAACTTCAGATG +
Preference number: 2 (lower is better)
Translates to: LKQVQSENVISLRCETGLLKNSI*HGELQM
Trigger: CATCTGAAGTTCTCCATGGCAAATTGAATTTTTCAG...CAAACCAGTTTCACATCTTAATGAAATAACATTCTCTGACTGCACTTGCTTCAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
3UTR-3UTR CCA 90 bp AGAGTACTGAAGCAAGTGCAGTCAGAGAATGTTATTTCATTAAGATGTGAAACTATCTTGGTGAGTTCTTaGATGTCAAAGTGTATACCA +
Preference number: 2 (lower is better)
Translates to: RVLKQVQSENVISLRCETILVSS*MSKCIP
Trigger: TGGTATACACTTTGACATCCAAGAACTCACCAAGAT...AGTTTCACATCTTAATGAAATAACATTCTCTGACTGCACTTGCTTCAGTACTCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
3UTR-3UTR CAA 90 bp TTTGCCAGACACCAAGCCAGGCATCGAGGGATAAGGAGGAGATGCTCACATCATAGATGCTGCAGGACCTaGCACCACCCTTTGAACAGC +
Preference number: 3 (lower is better)
Translates to: FARHQARHRGIRRRCSHHRCCRT*HHPLNS
Trigger: GCTGTTCAAAGGGTGGTGCAAGGTCCTGCAGCATCT...ATGATGTGAGCATCTCCTCCTTATCCCTCGATGCCTGGCTTGGTGTCTGGCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
3UTR-3UTR CAA 90 bp GGACTGTTTGCCAGACACCAAGCCAGGCATCGAGGGATAAGGAGGAGATGCTCAAATGCAGGAAGTAAGTaGTGGGGCCTGAGAGTTTAC +
Preference number: 3 (lower is better)
Translates to: GLFARHQARHRGIRRRCSNAGSK*WGLRVY
Trigger: GTAAACTCTCAGGCCCCACAACTTACTTCCTGCATT...TGAGCATCTCCTCCTTATCCCTCGATGCCTGGCTTGGTGTCTGGCAAACAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
3UTR-3UTR CAA 90 bp GGACTGTTTGCCAGACACCAAGCCAGGCATCGAGGGATAAGGAGGAGATGCTCATGGCAGTGTTTCTATTaGTCTGACAGTGACACCTTT +
Preference number: 3 (lower is better)
Translates to: GLFARHQARHRGIRRRCSWQCFY*SDSDTF
Trigger: AAAGGTGTCACTGTCAGACAAATAGAAACACTGCCA...TGAGCATCTCCTCCTTATCCCTCGATGCCTGGCTTGGTGTCTGGCAAACAGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
3UTR-3UTR CAA 90 bp GGACTGTTTGCCAGACACCAAGCCAGGCATCGAGGGATAAGGAGGAGATGCTCAAATAACTGTGGACTTTaGAGACACAAGGGGATGTCA +
Preference number: 3 (lower is better)
Translates to: GLFARHQARHRGIRRRCSNNCGL*RHKGMS
Trigger: TGACATCCCCTTGTGTCTCAAAAGTCCACAGTTATT...TGAGCATCTCCTCCTTATCCCTCGATGCCTGGCTTGGTGTCTGGCAAACAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
3UTR-3UTR CAA 90 bp GGACTGTTTGCCAGACACCAAGCCAGGCATCGAGGGATAAGGAGGAGATGCTCATCTCTGAAAAACATCTaGGTGAGTTCTTGGATGTCA +
Preference number: 3 (lower is better)
Translates to: GLFARHQARHRGIRRRCSSLKNI*VSSWMS
Trigger: TGACATCCAAGAACTCACCAAGATGTTTTTCAGAGA...TGAGCATCTCCTCCTTATCCCTCGATGCCTGGCTTGGTGTCTGGCAAACAGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
3UTR-3UTR CAA 90 bp TTTGCCAGACACCAAGCCAGGCATCGAGGGATAAGGAGGAGATGCTCACATCATACAGGACAGCTTGGATaGAGGAAGAACTCAGGAAAT +
Preference number: 3 (lower is better)
Translates to: FARHQARHRGIRRRCSHHTGQLG*RKNSGN
Trigger: ATTTCCTGAGTTCTTCCTCAATCCAAGCTGTCCTGT...ATGATGTGAGCATCTCCTCCTTATCCCTCGATGCCTGGCTTGGTGTCTGGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
3UTR-3UTR CAA 90 bp CTTTCAACATCTGCTAATTATGGACTGTTTGCCAGACACCAAGCCAGGCATCGAAATGCAGGAAGTAAGTaGTGGGGCCTGAGAGTTTAC +
Preference number: 3 (lower is better)
Translates to: LSTSANYGLFARHQARHRNAGSK*WGLRVY
Trigger: GTAAACTCTCAGGCCCCACAACTTACTTCCTGCATT...TCGATGCCTGGCTTGGTGTCTGGCAAACAGTCCATAATTAGCAGATGTTGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
3UTR-3UTR CAA 90 bp ACATCTGCTAATTATGGACTGTTTGCCAGACACCAAGCCAGGCATCGAGGGATAACAGGACAGCTTGGATaGAGGAAGAACTCAGGAAAT +
Preference number: 3 (lower is better)
Translates to: TSANYGLFARHQARHRGITGQLG*RKNSGN
Trigger: ATTTCCTGAGTTCTTCCTCAATCCAAGCTGTCCTGT...TATCCCTCGATGCCTGGCTTGGTGTCTGGCAAACAGTCCATAATTAGCAGATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
3UTR-3UTR CAA 90 bp ACATCTGCTAATTATGGACTGTTTGCCAGACACCAAGCCAGGCATCGAGGGATAGAGCATACATATCCCTaGGGGATCTTGTTAAAATGC +
Preference number: 3 (lower is better)
Translates to: TSANYGLFARHQARHRGIEHTYP*GILLKC
Trigger: GCATTTTAACAAGATCCCCAAGGGATATGTATGCTC...TATCCCTCGATGCCTGGCTTGGTGTCTGGCAAACAGTCCATAATTAGCAGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
3UTR-3UTR CAA 90 bp CTTTCAACATCTGCTAATTATGGACTGTTTGCCAGACACCAAGCCAGGCATCGATGGCAGTGTTTCTATTaGTCTGACAGTGACACCTTT +
Preference number: 3 (lower is better)
Translates to: LSTSANYGLFARHQARHRWQCFY*SDSDTF
Trigger: AAAGGTGTCACTGTCAGACAAATAGAAACACTGCCA...TCGATGCCTGGCTTGGTGTCTGGCAAACAGTCCATAATTAGCAGATGTTGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
3UTR-3UTR CAA 90 bp CTGAAGCAAGTGCAGTCAGAGAATGTTATTTCATTAAGATGTGAAACTGGTTTGAGATGCTGCAGGACCTaGCACCACCCTTTGAACAGC +
Preference number: 3 (lower is better)
Translates to: LKQVQSENVISLRCETGLRCCRT*HHPLNS
Trigger: GCTGTTCAAAGGGTGGTGCAAGGTCCTGCAGCATCT...CAAACCAGTTTCACATCTTAATGAAATAACATTCTCTGACTGCACTTGCTTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
3UTR-3UTR CAA 90 bp CTTTCAACATCTGCTAATTATGGACTGTTTGCCAGACACCAAGCCAGGCATCGAGAGCATACATATCCCTaGGGGATCTTGTTAAAATGC +
Preference number: 3 (lower is better)
Translates to: LSTSANYGLFARHQARHREHTYP*GILLKC
Trigger: GCATTTTAACAAGATCCCCAAGGGATATGTATGCTC...TCGATGCCTGGCTTGGTGTCTGGCAAACAGTCCATAATTAGCAGATGTTGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
3UTR-3UTR CAA 90 bp ACATCTGCTAATTATGGACTGTTTGCCAGACACCAAGCCAGGCATCGAGGGATATCTCTGAAAAACATCTaGGTGAGTTCTTGGATGTCA +
Preference number: 3 (lower is better)
Translates to: TSANYGLFARHQARHRGISLKNI*VSSWMS
Trigger: TGACATCCAAGAACTCACCAAGATGTTTTTCAGAGA...TATCCCTCGATGCCTGGCTTGGTGTCTGGCAAACAGTCCATAATTAGCAGATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
3UTR-3UTR CAA 90 bp CTTTCAACATCTGCTAATTATGGACTGTTTGCCAGACACCAAGCCAGGCATCGATCTCTGAAAAACATCTaGGTGAGTTCTTGGATGTCA +
Preference number: 3 (lower is better)
Translates to: LSTSANYGLFARHQARHRSLKNI*VSSWMS
Trigger: TGACATCCAAGAACTCACCAAGATGTTTTTCAGAGA...TCGATGCCTGGCTTGGTGTCTGGCAAACAGTCCATAATTAGCAGATGTTGAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
3UTR-3UTR CAA 90 bp CTTTCAACATCTGCTAATTATGGACTGTTTGCCAGACACCAAGCCAGGCATCGATTAAGTTACACCAAGTaGGCAGTGTTTCTATTTGTC +
Preference number: 3 (lower is better)
Translates to: LSTSANYGLFARHQARHRLSYTK*AVFLFV
Trigger: GACAAATAGAAACACTGCCAACTTGGTGTAACTTAA...TCGATGCCTGGCTTGGTGTCTGGCAAACAGTCCATAATTAGCAGATGTTGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
3UTR CCA 72 bp AAAATGCCCAAATGTTATATACTACACAGGACAGCTTaGATTGAGGAAGAACTCAGGAAATGGGAGATTACC +
Preference number: 3 (lower is better)
Translates to: KMPKCYILHRTA*IEEELRKWEIT
Trigger: GGTAATCTCCCATTTCCTGAGTTCTTCCTCAATCCAAGCTGTCCTGTGTAGTATATAACATTTGGGCATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
3UTR-3UTR CAA 90 bp CTGAAGCAAGTGCAGTCAGAGAATGTTATTTCATTAAGATGTGAAACTGGTTTGTGGCAGTGTTTCTATTaGTCTGACAGTGACACCTTT +
Preference number: 3 (lower is better)
Translates to: LKQVQSENVISLRCETGLWQCFY*SDSDTF
Trigger: AAAGGTGTCACTGTCAGACAAATAGAAACACTGCCA...CAAACCAGTTTCACATCTTAATGAAATAACATTCTCTGACTGCACTTGCTTCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
3UTR-3UTR CAA 90 bp AGAGTACTGAAGCAAGTGCAGTCAGAGAATGTTATTTCATTAAGATGTGAAACTCATCTTGGTGAGTTCTaGGATGTCAAAGTGTATACC +
Preference number: 3 (lower is better)
Translates to: RVLKQVQSENVISLRCETHLGEF*DVKVYT
Trigger: GGTATACACTTTGACATCCAAGAACTCACCAAGATG...AGTTTCACATCTTAATGAAATAACATTCTCTGACTGCACTTGCTTCAGTACTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
3UTR-3UTR CAA 90 bp AGAGTACTGAAGCAAGTGCAGTCAGAGAATGTTATTTCATTAAGATGTGAAACTTTAAGTTACACCAAGTaGGCAGTGTTTCTATTTGTC +
Preference number: 3 (lower is better)
Translates to: RVLKQVQSENVISLRCETLSYTK*AVFLFV
Trigger: GACAAATAGAAACACTGCCAACTTGGTGTAACTTAA...AGTTTCACATCTTAATGAAATAACATTCTCTGACTGCACTTGCTTCAGTACTCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR CCA 90 bp GGACTGTTTGCCAGACACCAAGCCAGGCATCGAGGGATAAGGAGGAGATGCTCAAGCACCACACGGGCATaGAGCGCTGCGCGAGGGGCG +
Preference number: 4 (lower is better)
Translates to: GLFARHQARHRGIRRRCSSTTRA*SAARGA
Trigger: CGCCCCTCGCGCAGCGCTCCATGCCCGTGTGGTGCT...TGAGCATCTCCTCCTTATCCCTCGATGCCTGGCTTGGTGTCTGGCAAACAGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451899.7
CDS-3UTR GCA 90 bp GGACTGTTTGCCAGACACCAAGCCAGGCATCGAGGGATAAGGAGGAGATGCTCATCACCAAACCACAGGTaGCCGGGACCCGCCCACCAC +
Preference number: 4 (lower is better)
Translates to: GLFARHQARHRGIRRRCSSPNHR*PGPAHH
Trigger: GTGGTGGGCGGGTCCCGGGCACCTGTGGTTTGGTGA...TGAGCATCTCCTCCTTATCCCTCGATGCCTGGCTTGGTGTCTGGCAAACAGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297438.6
CDS-3UTR GCA 90 bp TGTAAGATGCTGCAGGACCTTGCACCACCCTTTGAACAGCAAGGTGACCCATTACTCGCGCTGCCGGGGTaGAGACGCCGGGAGCTTCCG +
Preference number: 4 (lower is better)
Translates to: CKMLQDLAPPFEQQGDPLLALPG*RRRELP
Trigger: CGGAAGCTCCCGGCGTCTGCACCCCGGCAGCGCGAG...TAATGGGTCACCTTGCTGTTCAAAGGGTGGTGCAAGGTCCTGCAGCATCTTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297438.6
CDS-3UTR GCA 90 bp TTTGCCAGACACCAAGCCAGGCATCGAGGGATAAGGAGGAGATGCTCACATCATCTTCCGCTCCTCGCCTaGAGGGAGCCAGGCGCCGGA +
Preference number: 4 (lower is better)
Translates to: FARHQARHRGIRRRCSHHLPLLA*REPGAG
Trigger: TCCGGCGCCTGGCTCCCTGCAGGCGAGGAGCGGAAG...ATGATGTGAGCATCTCCTCCTTATCCCTCGATGCCTGGCTTGGTGTCTGGCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451899.7
CDS-3UTR CCA 90 bp ACATCTGCTAATTATGGACTGTTTGCCAGACACCAAGCCAGGCATCGAGGGATAGCTGCCCCGGCTCTGTaGCGCCGGAGTCCGCCTCCA +
Preference number: 4 (lower is better)
Translates to: TSANYGLFARHQARHRGIAAPAL*RRSPPP
Trigger: TGGAGGCGGACTCCGGCGCCACAGAGCCGGGGCAGC...TATCCCTCGATGCCTGGCTTGGTGTCTGGCAAACAGTCCATAATTAGCAGATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451899.7
CDS-3UTR TCA 90 bp TTTGCCAGACACCAAGCCAGGCATCGAGGGATAAGGAGGAGATGCTCACATCATGGGTGCCTCTCCCGCTaGCCCCCGCATCACAGTTAC +
Preference number: 4 (lower is better)
Translates to: FARHQARHRGIRRRCSHHGCLSR*PPHHSY
Trigger: GTAACTGTGATGCGGGGGTCAGCGGGAGAGGCACCC...ATGATGTGAGCATCTCCTCCTTATCCCTCGATGCCTGGCTTGGTGTCTGGCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297438.6
CDS-3UTR TCA 90 bp TGTAAGATGCTGCAGGACCTTGCACCACCCTTTGAACAGCAAGGTGACCCATTATGCAACTGGATTGGATaGTCGGCCCTCAAGGCCCTC +
Preference number: 4 (lower is better)
Translates to: CKMLQDLAPPFEQQGDPLCNWIG*SALKAL
Trigger: GAGGGCCTTGAGGGCCGATCATCCAATCCAGTTGCA...TAATGGGTCACCTTGCTGTTCAAAGGGTGGTGCAAGGTCCTGCAGCATCTTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR TCA 90 bp GGACTGTTTGCCAGACACCAAGCCAGGCATCGAGGGATAAGGAGGAGATGCTCACAGGACAGCTTGGATTaGGGAAGAACTCAGGAAATG +
Preference number: 4 (lower is better)
Translates to: GLFARHQARHRGIRRRCSQDSLD*GRTQEM
Trigger: CATTTCCTGAGTTCTTCCTCAATCCAAGCTGTCCTG...TGAGCATCTCCTCCTTATCCCTCGATGCCTGGCTTGGTGTCTGGCAAACAGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR GCA 90 bp TTTGCCAGACACCAAGCCAGGCATCGAGGGATAAGGAGGAGATGCTCACATCATATCCAGCGTTCCAGTTaGCAGCGCTACATTCTCAGC +
Preference number: 4 (lower is better)
Translates to: FARHQARHRGIRRRCSHHIQRSS*QRYILS
Trigger: GCTGAGAATGTAGCGCTGGCAACTGGAACGCTGGAT...ATGATGTGAGCATCTCCTCCTTATCCCTCGATGCCTGGCTTGGTGTCTGGCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR GCA 90 bp TGTAAGATGCTGCAGGACCTTGCACCACCCTTTGAACAGCAAGGTGACCCATTAGTAAGCACACAGTACTaGGTCAGCGGCAGTAAGCCC +
Preference number: 4 (lower is better)
Translates to: CKMLQDLAPPFEQQGDPLVSTQY*VSGSKP
Trigger: GGGCTTACTGCCGCTGACGCAGTACTGTGTGCTTAC...TAATGGGTCACCTTGCTGTTCAAAGGGTGGTGCAAGGTCCTGCAGCATCTTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR CCA 90 bp GGACTGTTTGCCAGACACCAAGCCAGGCATCGAGGGATAAGGAGGAGATGCTCAGCGAGCTATTTCCTCTaGCATAACTCGATCCCCTTT +
Preference number: 4 (lower is better)
Translates to: GLFARHQARHRGIRRRCSASYFL*HNSIPF
Trigger: AAAGGGGATCGAGTTATGCCAGAGGAAATAGCTCGC...TGAGCATCTCCTCCTTATCCCTCGATGCCTGGCTTGGTGTCTGGCAAACAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR CCA 90 bp GGACTGTTTGCCAGACACCAAGCCAGGCATCGAGGGATAAGGAGGAGATGCTCACCTTCAATTTCCAGATaGGCAGGAGAATCCAGCGTT +
Preference number: 4 (lower is better)
Translates to: GLFARHQARHRGIRRRCSPSISR*AGESSV
Trigger: AACGCTGGATTCTCCTGCCCATCTGGAAATTGAAGG...TGAGCATCTCCTCCTTATCCCTCGATGCCTGGCTTGGTGTCTGGCAAACAGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR TCA 90 bp ACATCTGCTAATTATGGACTGTTTGCCAGACACCAAGCCAGGCATCGAGGGATATACCAGCACGCCGGGTaGAAATCCAGGTGCTCATCA +
Preference number: 4 (lower is better)
Translates to: TSANYGLFARHQARHRGIYQHAG*KSRCSS
Trigger: TGATGAGCACCTGGATTTTCACCCGGCGTGCTGGTA...TATCCCTCGATGCCTGGCTTGGTGTCTGGCAAACAGTCCATAATTAGCAGATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297438.6
CDS-3UTR TCA 90 bp CTTTCAACATCTGCTAATTATGGACTGTTTGCCAGACACCAAGCCAGGCATCGATGCAACTGGATTGGATaGTCGGCCCTCAAGGCCCTC +
Preference number: 4 (lower is better)
Translates to: LSTSANYGLFARHQARHRCNWIG*SALKAL
Trigger: GAGGGCCTTGAGGGCCGATCATCCAATCCAGTTGCA...TCGATGCCTGGCTTGGTGTCTGGCAAACAGTCCATAATTAGCAGATGTTGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR TCA 90 bp GGACTGTTTGCCAGACACCAAGCCAGGCATCGAGGGATAAGGAGGAGATGCTCATCCAACTTCCAAAGCTaGTTGTCAACATGGAGCCTT +
Preference number: 4 (lower is better)
Translates to: GLFARHQARHRGIRRRCSSNFQS*LSTWSL
Trigger: AAGGCTCCATGTTGACAATCAGCTTTGGAAGTTGGA...TGAGCATCTCCTCCTTATCCCTCGATGCCTGGCTTGGTGTCTGGCAAACAGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR TCA 90 bp TTTGCCAGACACCAAGCCAGGCATCGAGGGATAAGGAGGAGATGCTCACATCATAGGCAGAAGGGAACATaGGAACCATCAGCTATTCGC +
Preference number: 4 (lower is better)
Translates to: FARHQARHRGIRRRCSHHRQKGT*EPSAIR
Trigger: GCGAATAGCTGATGGTTCTCATGTTCCCTTCTGCCT...ATGATGTGAGCATCTCCTCCTTATCCCTCGATGCCTGGCTTGGTGTCTGGCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR TCA 90 bp GGACTGTTTGCCAGACACCAAGCCAGGCATCGAGGGATAAGGAGGAGATGCTCACGTCTGCGAAACACATaGATCACAGGGATATTACTG +
Preference number: 4 (lower is better)
Translates to: GLFARHQARHRGIRRRCSRLRNT*ITGILL
Trigger: CAGTAATATCCCTGTGATTCATGTGTTTCGCAGACG...TGAGCATCTCCTCCTTATCCCTCGATGCCTGGCTTGGTGTCTGGCAAACAGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR GCA 90 bp ACATCTGCTAATTATGGACTGTTTGCCAGACACCAAGCCAGGCATCGAGGGATAGTAAGCACACAGTACTaGGTCAGCGGCAGTAAGCCC +
Preference number: 4 (lower is better)
Translates to: TSANYGLFARHQARHRGIVSTQY*VSGSKP
Trigger: GGGCTTACTGCCGCTGACGCAGTACTGTGTGCTTAC...TATCCCTCGATGCCTGGCTTGGTGTCTGGCAAACAGTCCATAATTAGCAGATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR TCA 90 bp TGTAAGATGCTGCAGGACCTTGCACCACCCTTTGAACAGCAAGGTGACCCATTAAGGCAGAAGGGAACATaGGAACCATCAGCTATTCGC +
Preference number: 4 (lower is better)
Translates to: CKMLQDLAPPFEQQGDPLRQKGT*EPSAIR
Trigger: GCGAATAGCTGATGGTTCTCATGTTCCCTTCTGCCT...TAATGGGTCACCTTGCTGTTCAAAGGGTGGTGCAAGGTCCTGCAGCATCTTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR TCA 90 bp GGACTGTTTGCCAGACACCAAGCCAGGCATCGAGGGATAAGGAGGAGATGCTCAGATTACCCTTACATGTaGTTGGCTGGCTTGACTTAT +
Preference number: 4 (lower is better)
Translates to: GLFARHQARHRGIRRRCSDYPYM*LAGLTY
Trigger: ATAAGTCAAGCCAGCCAATCACATGTAAGGGTAATC...TGAGCATCTCCTCCTTATCCCTCGATGCCTGGCTTGGTGTCTGGCAAACAGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR TCA 90 bp GGACTGTTTGCCAGACACCAAGCCAGGCATCGAGGGATAAGGAGGAGATGCTCAATAACTGTGGACTTTTaGGACACAAGGGGATGTCAA +
Preference number: 4 (lower is better)
Translates to: GLFARHQARHRGIRRRCSITVDF*DTRGCQ
Trigger: TTGACATCCCCTTGTGTCTCAAAAGTCCACAGTTAT...TGAGCATCTCCTCCTTATCCCTCGATGCCTGGCTTGGTGTCTGGCAAACAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR GCA 90 bp GGACTGTTTGCCAGACACCAAGCCAGGCATCGAGGGATAAGGAGGAGATGCTCAGATCAGTTACTCGTCTaGGAAACACATGAATCACAG +
Preference number: 4 (lower is better)
Translates to: GLFARHQARHRGIRRRCSDQLLV*ETHESQ
Trigger: CTGTGATTCATGTGTTTCGCAGACGAGTAACTGATC...TGAGCATCTCCTCCTTATCCCTCGATGCCTGGCTTGGTGTCTGGCAAACAGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR CCA 90 bp TTTGCCAGACACCAAGCCAGGCATCGAGGGATAAGGAGGAGATGCTCACATCATCTACACAGGACAGCTTaGATTGAGGAAGAACTCAGG +
Preference number: 4 (lower is better)
Translates to: FARHQARHRGIRRRCSHHLHRTA*IEEELR
Trigger: CCTGAGTTCTTCCTCAATCCAAGCTGTCCTGTGTAG...ATGATGTGAGCATCTCCTCCTTATCCCTCGATGCCTGGCTTGGTGTCTGGCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR TCA 90 bp ACATCTGCTAATTATGGACTGTTTGCCAGACACCAAGCCAGGCATCGAGGGATAAGGCAGAAGGGAACATaGGAACCATCAGCTATTCGC +
Preference number: 4 (lower is better)
Translates to: TSANYGLFARHQARHRGIRQKGT*EPSAIR
Trigger: GCGAATAGCTGATGGTTCTCATGTTCCCTTCTGCCT...TATCCCTCGATGCCTGGCTTGGTGTCTGGCAAACAGTCCATAATTAGCAGATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR CCA 90 bp ACATCTGCTAATTATGGACTGTTTGCCAGACACCAAGCCAGGCATCGAGGGATAACCACGCTTCTTTTATaGAAGTCCCGCTTCCGGGAA +
Preference number: 4 (lower is better)
Translates to: TSANYGLFARHQARHRGITTLLL*KSRFRE
Trigger: TTCCCGGAAGCGGGACTTCCATAAAAGAAGCGTGGT...TATCCCTCGATGCCTGGCTTGGTGTCTGGCAAACAGTCCATAATTAGCAGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297438.6
CDS-3UTR CCA 90 bp ACATCTGCTAATTATGGACTGTTTGCCAGACACCAAGCCAGGCATCGAGGGATACGCATCACAGTTACCTaGAGGACTCACCAAACCACA +
Preference number: 4 (lower is better)
Translates to: TSANYGLFARHQARHRGIRITVT*RTHQTT
Trigger: TGTGGTTTGGTGAGTCCTCCAGGTAACTGTGATGCG...TATCCCTCGATGCCTGGCTTGGTGTCTGGCAAACAGTCCATAATTAGCAGATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297438.6
CDS-3UTR CCA 90 bp GGACTGTTTGCCAGACACCAAGCCAGGCATCGAGGGATAAGGAGGAGATGCTCACCAATGCAAAACGGATaGATAATCATACCCAAAGTC +
Preference number: 4 (lower is better)
Translates to: GLFARHQARHRGIRRRCSPMQNG*IIIPKV
Trigger: GACTTTGGGTATGATTATCCATCCGTTTTGCATTGG...TGAGCATCTCCTCCTTATCCCTCGATGCCTGGCTTGGTGTCTGGCAAACAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR CCA 90 bp GGACTGTTTGCCAGACACCAAGCCAGGCATCGAGGGATAAGGAGGAGATGCTCAAATCCAGAAACGCTTTaGAGAACACATTTCATGTCC +
Preference number: 4 (lower is better)
Translates to: GLFARHQARHRGIRRRCSNPETL*RTHFMS
Trigger: GGACATGAAATGTGTTCTCCAAAGCGTTTCTGGATT...TGAGCATCTCCTCCTTATCCCTCGATGCCTGGCTTGGTGTCTGGCAAACAGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR CCA 90 bp TTTGCCAGACACCAAGCCAGGCATCGAGGGATAAGGAGGAGATGCTCACATCATTTACATGTGATTGGCTaGCTTGACTTATGGCCTAGG +
Preference number: 4 (lower is better)
Translates to: FARHQARHRGIRRRCSHHLHVIG*LDLWPR
Trigger: CCTAGGCCATAAGTCAAGCCAGCCAATCACATGTAA...ATGATGTGAGCATCTCCTCCTTATCCCTCGATGCCTGGCTTGGTGTCTGGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR TCA 90 bp TTTGCCAGACACCAAGCCAGGCATCGAGGGATAAGGAGGAGATGCTCACATCATGTAAGTTGTGGGGCCTaGGAGTTTACATTTCTAACA +
Preference number: 4 (lower is better)
Translates to: FARHQARHRGIRRRCSHHVSCGA*EFTFLT
Trigger: TGTTAGAAATGTAAACTCTCAGGCCCCACAACTTAC...ATGATGTGAGCATCTCCTCCTTATCCCTCGATGCCTGGCTTGGTGTCTGGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR TCA 90 bp GGACTGTTTGCCAGACACCAAGCCAGGCATCGAGGGATAAGGAGGAGATGCTCATCCAATAAACAACCATaGTATGAGCTGCTATGTCAT +
Preference number: 4 (lower is better)
Translates to: GLFARHQARHRGIRRRCSSNKQP*YELLCH
Trigger: ATGACATAGCAGCTCATATCATGGTTGTTTATTGGA...TGAGCATCTCCTCCTTATCCCTCGATGCCTGGCTTGGTGTCTGGCAAACAGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR GCA 90 bp ACATCTGCTAATTATGGACTGTTTGCCAGACACCAAGCCAGGCATCGAGGGATAAATCTGAGTTGTAAATaGCTCCTACCCTCACCCCAC +
Preference number: 4 (lower is better)
Translates to: TSANYGLFARHQARHRGINLSCK*LLPSPH
Trigger: GTGGGGTGAGGGTAGGAGGCATTTACAACTCAGATT...TATCCCTCGATGCCTGGCTTGGTGTCTGGCAAACAGTCCATAATTAGCAGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR CCA 90 bp GGACTGTTTGCCAGACACCAAGCCAGGCATCGAGGGATAAGGAGGAGATGCTCAAGTCCTGATCAACAATaGAAAGATGTCTTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: GLFARHQARHRGIRRRCSSPDQQ*KDVLLL
Trigger: AAGAAGCAAGACATCTTTCCATTGTTGATCAGGACT...TGAGCATCTCCTCCTTATCCCTCGATGCCTGGCTTGGTGTCTGGCAAACAGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR CCA 90 bp TTTGCCAGACACCAAGCCAGGCATCGAGGGATAAGGAGGAGATGCTCACATCATCCCAAAGTCAGCATCTaGATGAAGAAGTGTATCGAA +
Preference number: 4 (lower is better)
Translates to: FARHQARHRGIRRRCSHHPKVSI*MKKCIE
Trigger: TTCGATACACTTCTTCATCCAGATGCTGACTTTGGG...ATGATGTGAGCATCTCCTCCTTATCCCTCGATGCCTGGCTTGGTGTCTGGCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR CCA 90 bp ACATCTGCTAATTATGGACTGTTTGCCAGACACCAAGCCAGGCATCGAGGGATAGCGAGCTATTTCCTCTaGCATAACTCGATCCCCTTT +
Preference number: 4 (lower is better)
Translates to: TSANYGLFARHQARHRGIASYFL*HNSIPF
Trigger: AAAGGGGATCGAGTTATGCCAGAGGAAATAGCTCGC...TATCCCTCGATGCCTGGCTTGGTGTCTGGCAAACAGTCCATAATTAGCAGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR CCA 90 bp GGACTGTTTGCCAGACACCAAGCCAGGCATCGAGGGATAAGGAGGAGATGCTCAATCTTGGTGAGTTCTTaGATGTCAAAGTGTATACCA +
Preference number: 4 (lower is better)
Translates to: GLFARHQARHRGIRRRCSILVSS*MSKCIP
Trigger: TGGTATACACTTTGACATCCAAGAACTCACCAAGAT...TGAGCATCTCCTCCTTATCCCTCGATGCCTGGCTTGGTGTCTGGCAAACAGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR TCA 90 bp ACATCTGCTAATTATGGACTGTTTGCCAGACACCAAGCCAGGCATCGAGGGATATCCAACTTCCAAAGCTaGTTGTCAACATGGAGCCTT +
Preference number: 4 (lower is better)
Translates to: TSANYGLFARHQARHRGISNFQS*LSTWSL
Trigger: AAGGCTCCATGTTGACAATCAGCTTTGGAAGTTGGA...TATCCCTCGATGCCTGGCTTGGTGTCTGGCAAACAGTCCATAATTAGCAGATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR TCA 90 bp TTTGCCAGACACCAAGCCAGGCATCGAGGGATAAGGAGGAGATGCTCACATCATGCTCCTTCGTTTACTTaGTACCCAGTCCTTAAATTT +
Preference number: 4 (lower is better)
Translates to: FARHQARHRGIRRRCSHHAPSFT*YPVLKF
Trigger: AAATTTAAGGACTGGGTATCAAGTAAACGAAGGAGC...ATGATGTGAGCATCTCCTCCTTATCCCTCGATGCCTGGCTTGGTGTCTGGCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR TCA 90 bp TGTAAGATGCTGCAGGACCTTGCACCACCCTTTGAACAGCAAGGTGACCCATTAGATTACCCTTACATGTaGTTGGCTGGCTTGACTTAT +
Preference number: 4 (lower is better)
Translates to: CKMLQDLAPPFEQQGDPLDYPYM*LAGLTY
Trigger: ATAAGTCAAGCCAGCCAATCACATGTAAGGGTAATC...TAATGGGTCACCTTGCTGTTCAAAGGGTGGTGCAAGGTCCTGCAGCATCTTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR TCA 90 bp TGTAAGATGCTGCAGGACCTTGCACCACCCTTTGAACAGCAAGGTGACCCATTAGTAAGTTGTGGGGCCTaGGAGTTTACATTTCTAACA +
Preference number: 4 (lower is better)
Translates to: CKMLQDLAPPFEQQGDPLVSCGA*EFTFLT
Trigger: TGTTAGAAATGTAAACTCTCAGGCCCCACAACTTAC...TAATGGGTCACCTTGCTGTTCAAAGGGTGGTGCAAGGTCCTGCAGCATCTTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR TCA 90 bp TGTAAGATGCTGCAGGACCTTGCACCACCCTTTGAACAGCAAGGTGACCCATTAATAACTGTGGACTTTTaGGACACAAGGGGATGTCAA +
Preference number: 4 (lower is better)
Translates to: CKMLQDLAPPFEQQGDPLITVDF*DTRGCQ
Trigger: TTGACATCCCCTTGTGTCTCAAAAGTCCACAGTTAT...TAATGGGTCACCTTGCTGTTCAAAGGGTGGTGCAAGGTCCTGCAGCATCTTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR TCA 90 bp TGTAAGATGCTGCAGGACCTTGCACCACCCTTTGAACAGCAAGGTGACCCATTAGATTCTTCCCTTCCATaGATAGCTATAGCTGATAGC +
Preference number: 4 (lower is better)
Translates to: CKMLQDLAPPFEQQGDPLDSSLP*IAIADS
Trigger: GCTATCAGCTATAGCTATTCATGGAAGGGAAGAATC...TAATGGGTCACCTTGCTGTTCAAAGGGTGGTGCAAGGTCCTGCAGCATCTTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR GCA 90 bp GGACTGTTTGCCAGACACCAAGCCAGGCATCGAGGGATAAGGAGGAGATGCTCAACCTATCAATACTACTaGTGCAGACAGCTTAAATAT +
Preference number: 4 (lower is better)
Translates to: GLFARHQARHRGIRRRCSTYQYY*CRQLKY
Trigger: ATATTTAAGCTGTCTGCAGCAGTAGTATTGATAGGT...TGAGCATCTCCTCCTTATCCCTCGATGCCTGGCTTGGTGTCTGGCAAACAGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR CCA 90 bp TGTAAGATGCTGCAGGACCTTGCACCACCCTTTGAACAGCAAGGTGACCCATTACCCAAAGTCAGCATCTaGATGAAGAAGTGTATCGAA +
Preference number: 4 (lower is better)
Translates to: CKMLQDLAPPFEQQGDPLPKVSI*MKKCIE
Trigger: TTCGATACACTTCTTCATCCAGATGCTGACTTTGGG...TAATGGGTCACCTTGCTGTTCAAAGGGTGGTGCAAGGTCCTGCAGCATCTTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR CCA 90 bp CTTTCAACATCTGCTAATTATGGACTGTTTGCCAGACACCAAGCCAGGCATCGACCTTCAATTTCCAGATaGGCAGGAGAATCCAGCGTT +
Preference number: 4 (lower is better)
Translates to: LSTSANYGLFARHQARHRPSISR*AGESSV
Trigger: AACGCTGGATTCTCCTGCCCATCTGGAAATTGAAGG...TCGATGCCTGGCTTGGTGTCTGGCAAACAGTCCATAATTAGCAGATGTTGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR CCA 90 bp ACATCTGCTAATTATGGACTGTTTGCCAGACACCAAGCCAGGCATCGAGGGATAGCAGGAAGTAAGTTGTaGGGCCTGAGAGTTTACATT +
Preference number: 4 (lower is better)
Translates to: TSANYGLFARHQARHRGIAGSKL*GLRVYI
Trigger: AATGTAAACTCTCAGGCCCCACAACTTACTTCCTGC...TATCCCTCGATGCCTGGCTTGGTGTCTGGCAAACAGTCCATAATTAGCAGATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR TCA 90 bp TGTAAGATGCTGCAGGACCTTGCACCACCCTTTGAACAGCAAGGTGACCCATTAAGAAAGGCATATTCCTaGGGGTCCATTTCCTATTAT +
Preference number: 4 (lower is better)
Translates to: CKMLQDLAPPFEQQGDPLRKAYS*GSISYY
Trigger: ATAATAGGAAATGGACCCTCAGGAATATGCCTTTCT...TAATGGGTCACCTTGCTGTTCAAAGGGTGGTGCAAGGTCCTGCAGCATCTTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR TCA 90 bp TTTGCCAGACACCAAGCCAGGCATCGAGGGATAAGGAGGAGATGCTCACATCATTGTCTCAAATTTTTATaGGCATACATATCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: FARHQARHRGIRRRCSHHCLKFL*AYISLG
Trigger: CCCAAGGGATATGTATGCTCATAAAAATTTGAGACA...ATGATGTGAGCATCTCCTCCTTATCCCTCGATGCCTGGCTTGGTGTCTGGCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR GCA 90 bp CTTTCAACATCTGCTAATTATGGACTGTTTGCCAGACACCAAGCCAGGCATCGAACACTGGATCCACTTTaGCACGCAACTTTCCTTTGT +
Preference number: 4 (lower is better)
Translates to: LSTSANYGLFARHQARHRTLDPL*HATFLC
Trigger: ACAAAGGAAAGTTGCGTGGCAAAGTGGATCCAGTGT...TCGATGCCTGGCTTGGTGTCTGGCAAACAGTCCATAATTAGCAGATGTTGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR GCA 90 bp ACATCTGCTAATTATGGACTGTTTGCCAGACACCAAGCCAGGCATCGAGGGATAGATCAGTTACTCGTCTaGGAAACACATGAATCACAG +
Preference number: 4 (lower is better)
Translates to: TSANYGLFARHQARHRGIDQLLV*ETHESQ
Trigger: CTGTGATTCATGTGTTTCGCAGACGAGTAACTGATC...TATCCCTCGATGCCTGGCTTGGTGTCTGGCAAACAGTCCATAATTAGCAGATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR CCA 90 bp TTTGCCAGACACCAAGCCAGGCATCGAGGGATAAGGAGGAGATGCTCACATCATAGTCCTGATCAACAATaGAAAGATGTCTTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: FARHQARHRGIRRRCSHHSPDQQ*KDVLLL
Trigger: AAGAAGCAAGACATCTTTCCATTGTTGATCAGGACT...ATGATGTGAGCATCTCCTCCTTATCCCTCGATGCCTGGCTTGGTGTCTGGCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR CCA 90 bp TGTAAGATGCTGCAGGACCTTGCACCACCCTTTGAACAGCAAGGTGACCCATTACCAATGCAAAACGGATaGATAATCATACCCAAAGTC +
Preference number: 4 (lower is better)
Translates to: CKMLQDLAPPFEQQGDPLPMQNG*IIIPKV
Trigger: GACTTTGGGTATGATTATCCATCCGTTTTGCATTGG...TAATGGGTCACCTTGCTGTTCAAAGGGTGGTGCAAGGTCCTGCAGCATCTTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR CCA 90 bp TGTAAGATGCTGCAGGACCTTGCACCACCCTTTGAACAGCAAGGTGACCCATTAGGTGCTCGGGAAAGCTaGTATAATCAGATAAAAGAT +
Preference number: 4 (lower is better)
Translates to: CKMLQDLAPPFEQQGDPLGARES*YNQIKD
Trigger: ATCTTTTATCTGATTATACCAGCTTTCCCGAGCACC...TAATGGGTCACCTTGCTGTTCAAAGGGTGGTGCAAGGTCCTGCAGCATCTTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR CCA 90 bp CTTTCAACATCTGCTAATTATGGACTGTTTGCCAGACACCAAGCCAGGCATCGAGCAGGAAGTAAGTTGTaGGGCCTGAGAGTTTACATT +
Preference number: 4 (lower is better)
Translates to: LSTSANYGLFARHQARHRAGSKL*GLRVYI
Trigger: AATGTAAACTCTCAGGCCCCACAACTTACTTCCTGC...TCGATGCCTGGCTTGGTGTCTGGCAAACAGTCCATAATTAGCAGATGTTGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR TCA 90 bp AGAGTACTGAAGCAAGTGCAGTCAGAGAATGTTATTTCATTAAGATGTGAAACTTGCAACTGGATTGGATaGTCGGCCCTCAAGGCCCTC +
Preference number: 4 (lower is better)
Translates to: RVLKQVQSENVISLRCETCNWIG*SALKAL
Trigger: GAGGGCCTTGAGGGCCGATCATCCAATCCAGTTGCA...AGTTTCACATCTTAATGAAATAACATTCTCTGACTGCACTTGCTTCAGTACTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR TCA 90 bp ACATCTGCTAATTATGGACTGTTTGCCAGACACCAAGCCAGGCATCGAGGGATAAAGTCAGCATCTGGATaGAGAAGTGTATCGAAAAGT +
Preference number: 4 (lower is better)
Translates to: TSANYGLFARHQARHRGIKSASG*RSVSKS
Trigger: ACTTTTCGATACACTTCTTCATCCAGATGCTGACTT...TATCCCTCGATGCCTGGCTTGGTGTCTGGCAAACAGTCCATAATTAGCAGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR TCA 90 bp TGTAAGATGCTGCAGGACCTTGCACCACCCTTTGAACAGCAAGGTGACCCATTAATCTCTGTAGAGTCTTaGTACGGAAGTTATGTAAGT +
Preference number: 4 (lower is better)
Translates to: CKMLQDLAPPFEQQGDPLISVES*YGSYVS
Trigger: ACTTACATAACTTCCGTATCAAGACTCTACAGAGAT...TAATGGGTCACCTTGCTGTTCAAAGGGTGGTGCAAGGTCCTGCAGCATCTTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR TCA 90 bp CTTTCAACATCTGCTAATTATGGACTGTTTGCCAGACACCAAGCCAGGCATCGAGATTACCCTTACATGTaGTTGGCTGGCTTGACTTAT +
Preference number: 4 (lower is better)
Translates to: LSTSANYGLFARHQARHRDYPYM*LAGLTY
Trigger: ATAAGTCAAGCCAGCCAATCACATGTAAGGGTAATC...TCGATGCCTGGCTTGGTGTCTGGCAAACAGTCCATAATTAGCAGATGTTGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR TCA 90 bp CTTTCAACATCTGCTAATTATGGACTGTTTGCCAGACACCAAGCCAGGCATCGAGATTCTTCCCTTCCATaGATAGCTATAGCTGATAGC +
Preference number: 4 (lower is better)
Translates to: LSTSANYGLFARHQARHRDSSLP*IAIADS
Trigger: GCTATCAGCTATAGCTATTCATGGAAGGGAAGAATC...TCGATGCCTGGCTTGGTGTCTGGCAAACAGTCCATAATTAGCAGATGTTGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR GCA 90 bp CTGAAGCAAGTGCAGTCAGAGAATGTTATTTCATTAAGATGTGAAACTGGTTTGGTAAGCACACAGTACTaGGTCAGCGGCAGTAAGCCC +
Preference number: 4 (lower is better)
Translates to: LKQVQSENVISLRCETGLVSTQY*VSGSKP
Trigger: GGGCTTACTGCCGCTGACGCAGTACTGTGTGCTTAC...CAAACCAGTTTCACATCTTAATGAAATAACATTCTCTGACTGCACTTGCTTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR GCA 90 bp TTTGCCAGACACCAAGCCAGGCATCGAGGGATAAGGAGGAGATGCTCACATCATCTGAAAAATTCAATTTaGCATGGAGAACTTCAGATG +
Preference number: 4 (lower is better)
Translates to: FARHQARHRGIRRRCSHHLKNSI*HGELQM
Trigger: CATCTGAAGTTCTCCATGGCAAATTGAATTTTTCAG...ATGATGTGAGCATCTCCTCCTTATCCCTCGATGCCTGGCTTGGTGTCTGGCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR CCA 90 bp ACATCTGCTAATTATGGACTGTTTGCCAGACACCAAGCCAGGCATCGAGGGATAGGTGCTCGGGAAAGCTaGTATAATCAGATAAAAGAT +
Preference number: 4 (lower is better)
Translates to: TSANYGLFARHQARHRGIGARES*YNQIKD
Trigger: ATCTTTTATCTGATTATACCAGCTTTCCCGAGCACC...TATCCCTCGATGCCTGGCTTGGTGTCTGGCAAACAGTCCATAATTAGCAGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR TCA 90 bp CTTTCAACATCTGCTAATTATGGACTGTTTGCCAGACACCAAGCCAGGCATCGAGCTCCTTCGTTTACTTaGTACCCAGTCCTTAAATTT +
Preference number: 4 (lower is better)
Translates to: LSTSANYGLFARHQARHRAPSFT*YPVLKF
Trigger: AAATTTAAGGACTGGGTATCAAGTAAACGAAGGAGC...TCGATGCCTGGCTTGGTGTCTGGCAAACAGTCCATAATTAGCAGATGTTGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR GCA 90 bp CTGAAGCAAGTGCAGTCAGAGAATGTTATTTCATTAAGATGTGAAACTGGTTTGATCCAGCGTTCCAGTTaGCAGCGCTACATTCTCAGC +
Preference number: 4 (lower is better)
Translates to: LKQVQSENVISLRCETGLIQRSS*QRYILS
Trigger: GCTGAGAATGTAGCGCTGGCAACTGGAACGCTGGAT...CAAACCAGTTTCACATCTTAATGAAATAACATTCTCTGACTGCACTTGCTTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR GCA 90 bp TGTAAGATGCTGCAGGACCTTGCACCACCCTTTGAACAGCAAGGTGACCCATTAACCTATCAATACTACTaGTGCAGACAGCTTAAATAT +
Preference number: 4 (lower is better)
Translates to: CKMLQDLAPPFEQQGDPLTYQYY*CRQLKY
Trigger: ATATTTAAGCTGTCTGCAGCAGTAGTATTGATAGGT...TAATGGGTCACCTTGCTGTTCAAAGGGTGGTGCAAGGTCCTGCAGCATCTTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR GCA 90 bp ACATCTGCTAATTATGGACTGTTTGCCAGACACCAAGCCAGGCATCGAGGGATAAACCATGATATGAGCTaGTATGTCATCTCGAATGAA +
Preference number: 4 (lower is better)
Translates to: TSANYGLFARHQARHRGINHDMS*YVISNE
Trigger: TTCATTCGAGATGACATAGCAGCTCATATCATGGTT...TATCCCTCGATGCCTGGCTTGGTGTCTGGCAAACAGTCCATAATTAGCAGATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR CCA 90 bp CTTTCAACATCTGCTAATTATGGACTGTTTGCCAGACACCAAGCCAGGCATCGAAATCCAGAAACGCTTTaGAGAACACATTTCATGTCC +
Preference number: 4 (lower is better)
Translates to: LSTSANYGLFARHQARHRNPETL*RTHFMS
Trigger: GGACATGAAATGTGTTCTCCAAAGCGTTTCTGGATT...TCGATGCCTGGCTTGGTGTCTGGCAAACAGTCCATAATTAGCAGATGTTGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR TCA 90 bp CTTTCAACATCTGCTAATTATGGACTGTTTGCCAGACACCAAGCCAGGCATCGAATCTCTGTAGAGTCTTaGTACGGAAGTTATGTAAGT +
Preference number: 4 (lower is better)
Translates to: LSTSANYGLFARHQARHRISVES*YGSYVS
Trigger: ACTTACATAACTTCCGTATCAAGACTCTACAGAGAT...TCGATGCCTGGCTTGGTGTCTGGCAAACAGTCCATAATTAGCAGATGTTGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR GCA 90 bp AGAGTACTGAAGCAAGTGCAGTCAGAGAATGTTATTTCATTAAGATGTGAAACTATCCAGCGTTCCAGTTaGCAGCGCTACATTCTCAGC +
Preference number: 4 (lower is better)
Translates to: RVLKQVQSENVISLRCETIQRSS*QRYILS
Trigger: GCTGAGAATGTAGCGCTGGCAACTGGAACGCTGGAT...AGTTTCACATCTTAATGAAATAACATTCTCTGACTGCACTTGCTTCAGTACTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR GCA 90 bp ACATCTGCTAATTATGGACTGTTTGCCAGACACCAAGCCAGGCATCGAGGGATAACCTATCAATACTACTaGTGCAGACAGCTTAAATAT +
Preference number: 4 (lower is better)
Translates to: TSANYGLFARHQARHRGITYQYY*CRQLKY
Trigger: ATATTTAAGCTGTCTGCAGCAGTAGTATTGATAGGT...TATCCCTCGATGCCTGGCTTGGTGTCTGGCAAACAGTCCATAATTAGCAGATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR GCA 90 bp ACATCTGCTAATTATGGACTGTTTGCCAGACACCAAGCCAGGCATCGAGGGATATTCACCAGATTTATTTaGAGCTCCACTGAACTTTTA +
Preference number: 4 (lower is better)
Translates to: TSANYGLFARHQARHRGIFTRFI*SSTELL
Trigger: TAAAAGTTCAGTGGAGCTGCAAATAAATCTGGTGAA...TATCCCTCGATGCCTGGCTTGGTGTCTGGCAAACAGTCCATAATTAGCAGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR CCA 90 bp AGAGTACTGAAGCAAGTGCAGTCAGAGAATGTTATTTCATTAAGATGTGAAACTGTACTGCAACTGGATTaGATGATCGGCCCTCAAGGC +
Preference number: 4 (lower is better)
Translates to: RVLKQVQSENVISLRCETVLQLD*MIGPQG
Trigger: GCCTTGAGGGCCGATCATCCAATCCAGTTGCAGTAC...AGTTTCACATCTTAATGAAATAACATTCTCTGACTGCACTTGCTTCAGTACTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR CCA 90 bp CTTTCAACATCTGCTAATTATGGACTGTTTGCCAGACACCAAGCCAGGCATCGAATCTTGGTGAGTTCTTaGATGTCAAAGTGTATACCA +
Preference number: 4 (lower is better)
Translates to: LSTSANYGLFARHQARHRILVSS*MSKCIP
Trigger: TGGTATACACTTTGACATCCAAGAACTCACCAAGAT...TCGATGCCTGGCTTGGTGTCTGGCAAACAGTCCATAATTAGCAGATGTTGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
3UTR CAA 72 bp ACAGATGTAAGATGCTGCAGGACCTTGCACCACCCTTaGAACAGCAAGGTGACCCATTATATATTTAAGATA +
Preference number: 4 (lower is better)
Translates to: TDVRCCRTLHHP*NSKVTHYIFKI
Trigger: TATCTTAAATATATAATGGGTCACCTTGCTGTTCAAAGGGTGGTGCAAGGTCCTGCAGCATCTTACATCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR TCA 90 bp CTGAAGCAAGTGCAGTCAGAGAATGTTATTTCATTAAGATGTGAAACTGGTTTGCAGGACAGCTTGGATTaGGGAAGAACTCAGGAAATG +
Preference number: 4 (lower is better)
Translates to: LKQVQSENVISLRCETGLQDSLD*GRTQEM
Trigger: CATTTCCTGAGTTCTTCCTCAATCCAAGCTGTCCTG...CAAACCAGTTTCACATCTTAATGAAATAACATTCTCTGACTGCACTTGCTTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR GCA 90 bp CTGAAGCAAGTGCAGTCAGAGAATGTTATTTCATTAAGATGTGAAACTGGTTTGAATCTGAGTTGTAAATaGCTCCTACCCTCACCCCAC +
Preference number: 4 (lower is better)
Translates to: LKQVQSENVISLRCETGLNLSCK*LLPSPH
Trigger: GTGGGGTGAGGGTAGGAGGCATTTACAACTCAGATT...CAAACCAGTTTCACATCTTAATGAAATAACATTCTCTGACTGCACTTGCTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR TCA 90 bp CTGAAGCAAGTGCAGTCAGAGAATGTTATTTCATTAAGATGTGAAACTGGTTTGCGTCTGCGAAACACATaGATCACAGGGATATTACTG +
Preference number: 4 (lower is better)
Translates to: LKQVQSENVISLRCETGLRLRNT*ITGILL
Trigger: CAGTAATATCCCTGTGATTCATGTGTTTCGCAGACG...CAAACCAGTTTCACATCTTAATGAAATAACATTCTCTGACTGCACTTGCTTCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR GCA 90 bp CTGAAGCAAGTGCAGTCAGAGAATGTTATTTCATTAAGATGTGAAACTGGTTTGACACTGGATCCACTTTaGCACGCAACTTTCCTTTGT +
Preference number: 4 (lower is better)
Translates to: LKQVQSENVISLRCETGLTLDPL*HATFLC
Trigger: ACAAAGGAAAGTTGCGTGGCAAAGTGGATCCAGTGT...CAAACCAGTTTCACATCTTAATGAAATAACATTCTCTGACTGCACTTGCTTCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR CCA 90 bp AGAGTACTGAAGCAAGTGCAGTCAGAGAATGTTATTTCATTAAGATGTGAAACTCCTTCAATTTCCAGATaGGCAGGAGAATCCAGCGTT +
Preference number: 4 (lower is better)
Translates to: RVLKQVQSENVISLRCETPSISR*AGESSV
Trigger: AACGCTGGATTCTCCTGCCCATCTGGAAATTGAAGG...AGTTTCACATCTTAATGAAATAACATTCTCTGACTGCACTTGCTTCAGTACTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR CCA 90 bp AGAGTACTGAAGCAAGTGCAGTCAGAGAATGTTATTTCATTAAGATGTGAAACTCTACACAGGACAGCTTaGATTGAGGAAGAACTCAGG +
Preference number: 4 (lower is better)
Translates to: RVLKQVQSENVISLRCETLHRTA*IEEELR
Trigger: CCTGAGTTCTTCCTCAATCCAAGCTGTCCTGTGTAG...AGTTTCACATCTTAATGAAATAACATTCTCTGACTGCACTTGCTTCAGTACTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR TCA 90 bp AGAGTACTGAAGCAAGTGCAGTCAGAGAATGTTATTTCATTAAGATGTGAAACTTCCAACTTCCAAAGCTaGTTGTCAACATGGAGCCTT +
Preference number: 4 (lower is better)
Translates to: RVLKQVQSENVISLRCETSNFQS*LSTWSL
Trigger: AAGGCTCCATGTTGACAATCAGCTTTGGAAGTTGGA...AGTTTCACATCTTAATGAAATAACATTCTCTGACTGCACTTGCTTCAGTACTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR TCA 90 bp AGAGTACTGAAGCAAGTGCAGTCAGAGAATGTTATTTCATTAAGATGTGAAACTCGTCTGCGAAACACATaGATCACAGGGATATTACTG +
Preference number: 4 (lower is better)
Translates to: RVLKQVQSENVISLRCETRLRNT*ITGILL
Trigger: CAGTAATATCCCTGTGATTCATGTGTTTCGCAGACG...AGTTTCACATCTTAATGAAATAACATTCTCTGACTGCACTTGCTTCAGTACTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR GCA 90 bp AGAGTACTGAAGCAAGTGCAGTCAGAGAATGTTATTTCATTAAGATGTGAAACTACACTGGATCCACTTTaGCACGCAACTTTCCTTTGT +
Preference number: 4 (lower is better)
Translates to: RVLKQVQSENVISLRCETTLDPL*HATFLC
Trigger: ACAAAGGAAAGTTGCGTGGCAAAGTGGATCCAGTGT...AGTTTCACATCTTAATGAAATAACATTCTCTGACTGCACTTGCTTCAGTACTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR CCA 90 bp CTGAAGCAAGTGCAGTCAGAGAATGTTATTTCATTAAGATGTGAAACTGGTTTGCCCAAAGTCAGCATCTaGATGAAGAAGTGTATCGAA +
Preference number: 4 (lower is better)
Translates to: LKQVQSENVISLRCETGLPKVSI*MKKCIE
Trigger: TTCGATACACTTCTTCATCCAGATGCTGACTTTGGG...CAAACCAGTTTCACATCTTAATGAAATAACATTCTCTGACTGCACTTGCTTCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR CCA 90 bp AGAGTACTGAAGCAAGTGCAGTCAGAGAATGTTATTTCATTAAGATGTGAAACTTTACATGTGATTGGCTaGCTTGACTTATGGCCTAGG +
Preference number: 4 (lower is better)
Translates to: RVLKQVQSENVISLRCETLHVIG*LDLWPR
Trigger: CCTAGGCCATAAGTCAAGCCAGCCAATCACATGTAA...AGTTTCACATCTTAATGAAATAACATTCTCTGACTGCACTTGCTTCAGTACTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR TCA 90 bp CTGAAGCAAGTGCAGTCAGAGAATGTTATTTCATTAAGATGTGAAACTGGTTTGAGAAAGGCATATTCCTaGGGGTCCATTTCCTATTAT +
Preference number: 4 (lower is better)
Translates to: LKQVQSENVISLRCETGLRKAYS*GSISYY
Trigger: ATAATAGGAAATGGACCCTCAGGAATATGCCTTTCT...CAAACCAGTTTCACATCTTAATGAAATAACATTCTCTGACTGCACTTGCTTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR GCA 90 bp AGAGTACTGAAGCAAGTGCAGTCAGAGAATGTTATTTCATTAAGATGTGAAACTGGGATAAGGAGGAGATaGTCACATCATGCTATAACT +
Preference number: 4 (lower is better)
Translates to: RVLKQVQSENVISLRCETGIRRR*SHHAIT
Trigger: AGTTATAGCATGATGTGAGCATCTCCTCCTTATCCC...AGTTTCACATCTTAATGAAATAACATTCTCTGACTGCACTTGCTTCAGTACTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR CCA 90 bp CTGAAGCAAGTGCAGTCAGAGAATGTTATTTCATTAAGATGTGAAACTGGTTTGAATCCAGAAACGCTTTaGAGAACACATTTCATGTCC +
Preference number: 4 (lower is better)
Translates to: LKQVQSENVISLRCETGLNPETL*RTHFMS
Trigger: GGACATGAAATGTGTTCTCCAAAGCGTTTCTGGATT...CAAACCAGTTTCACATCTTAATGAAATAACATTCTCTGACTGCACTTGCTTCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR TCA 90 bp AGAGTACTGAAGCAAGTGCAGTCAGAGAATGTTATTTCATTAAGATGTGAAACTAGAAAGGCATATTCCTaGGGGTCCATTTCCTATTAT +
Preference number: 4 (lower is better)
Translates to: RVLKQVQSENVISLRCETRKAYS*GSISYY
Trigger: ATAATAGGAAATGGACCCTCAGGAATATGCCTTTCT...AGTTTCACATCTTAATGAAATAACATTCTCTGACTGCACTTGCTTCAGTACTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR TCA 90 bp AGAGTACTGAAGCAAGTGCAGTCAGAGAATGTTATTTCATTAAGATGTGAAACTAAGTCAGCATCTGGATaGAGAAGTGTATCGAAAAGT +
Preference number: 4 (lower is better)
Translates to: RVLKQVQSENVISLRCETKSASG*RSVSKS
Trigger: ACTTTTCGATACACTTCTTCATCCAGATGCTGACTT...AGTTTCACATCTTAATGAAATAACATTCTCTGACTGCACTTGCTTCAGTACTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR TCA 90 bp AGAGTACTGAAGCAAGTGCAGTCAGAGAATGTTATTTCATTAAGATGTGAAACTGCTCCTTCGTTTACTTaGTACCCAGTCCTTAAATTT +
Preference number: 4 (lower is better)
Translates to: RVLKQVQSENVISLRCETAPSFT*YPVLKF
Trigger: AAATTTAAGGACTGGGTATCAAGTAAACGAAGGAGC...AGTTTCACATCTTAATGAAATAACATTCTCTGACTGCACTTGCTTCAGTACTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR CCA 90 bp AGAGTACTGAAGCAAGTGCAGTCAGAGAATGTTATTTCATTAAGATGTGAAACTCCAATGCAAAACGGATaGATAATCATACCCAAAGTC +
Preference number: 4 (lower is better)
Translates to: RVLKQVQSENVISLRCETPMQNG*IIIPKV
Trigger: GACTTTGGGTATGATTATCCATCCGTTTTGCATTGG...AGTTTCACATCTTAATGAAATAACATTCTCTGACTGCACTTGCTTCAGTACTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR GCA 90 bp AGAGTACTGAAGCAAGTGCAGTCAGAGAATGTTATTTCATTAAGATGTGAAACTCTGAAAAATTCAATTTaGCATGGAGAACTTCAGATG +
Preference number: 4 (lower is better)
Translates to: RVLKQVQSENVISLRCETLKNSI*HGELQM
Trigger: CATCTGAAGTTCTCCATGGCAAATTGAATTTTTCAG...AGTTTCACATCTTAATGAAATAACATTCTCTGACTGCACTTGCTTCAGTACTCT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR GCA 90 bp AGAGTACTGAAGCAAGTGCAGTCAGAGAATGTTATTTCATTAAGATGTGAAACTTTCACCAGATTTATTTaGAGCTCCACTGAACTTTTA +
Preference number: 4 (lower is better)
Translates to: RVLKQVQSENVISLRCETFTRFI*SSTELL
Trigger: TAAAAGTTCAGTGGAGCTGCAAATAAATCTGGTGAA...AGTTTCACATCTTAATGAAATAACATTCTCTGACTGCACTTGCTTCAGTACTCT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS CCA 90 bp GCCCCTGCCTCGCGCCTCGCCGTTGCCGCGGCTGCCCCGGCTCTGTaGCGCCGGAGTCCGCCTCCAGATAGCGGCTTCCGCTCCTCGCCT +
Preference number: 5 (lower is better)
Translates to: APASRLAVAAAAPAL*RRSPPPDSGFRSSP
Trigger: AGGCGAGGAGCGGAAGCCGCTATCTGGAGGCGGACTCCGGCGCCACAGAGCCGGGGCAGCCGCGGCAACGGCGAGGCGCGAGGCAGGGGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451899.7
CDS CCA 90 bp GAGCTTCCGGGTGCCTCTCCCGCTGACCCCCGCATCACAGTTACCTaGAGGACTCACCAAACCACAGGTGCCCGGGACCCGCCCACCACG +
Preference number: 5 (lower is better)
Translates to: ELPGASPADPRITVT*RTHQTTGARDPPTT
Trigger: CGTGGTGGGCGGGTCCCGGGCACCTGTGGTTTGGTGAGTCCTCCAGGTAACTGTGATGCGGGGGTCAGCGGGAGAGGCACCCGGAAGCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297438.6
CDS GCA 90 bp CAGTGTCACTATAGTTTCTTTGGGCATTTCCTCGCGCTGCCGGGGTaGAGACGCCGGGAGCTTCCGGGTGCCTCTCCCGCTGACCCCCGC +
Preference number: 5 (lower is better)
Translates to: QCHYSFFGHFLALPG*RRRELPGASPADPR
Trigger: GCGGGGGTCAGCGGGAGAGGCACCCGGAAGCTCCCGGCGTCTGCACCCCGGCAGCGCGAGGAAATGCCCAAAGAAACTATAGTGACACTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297438.6
CDS CCA 90 bp CACCAAACCACAGGTGCCCGGGACCCGCCCACCACGCTTCTTTTATaGAAGTCCCGCTTCCGGGAAGAGGTCATCCTCCCCTCTTCATGT +
Preference number: 5 (lower is better)
Translates to: HQTTGARDPPTTLLL*KSRFREEVILPSSC
Trigger: ACATGAAGAGGGGAGGATGACCTCTTCCCGGAAGCGGGACTTCCATAAAAGAAGCGTGGTGGGCGGGTCCCGGGCACCTGTGGTTTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297438.6
CDS-3UTR CAA 90 bp GGACTGTTTGCCAGACACCAAGCCAGGCATCGAGGGATAAGGAGGAGATGCTCAAGATGCTGCAGGACCTaGCACCACCCTTTGAACAGC +
Preference number: 5 (lower is better)
Translates to: GLFARHQARHRGIRRRCSRCCRT*HHPLNS
Trigger: GCTGTTCAAAGGGTGGTGCAAGGTCCTGCAGCATCT...TGAGCATCTCCTCCTTATCCCTCGATGCCTGGCTTGGTGTCTGGCAAACAGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR CAA 90 bp GGACTGTTTGCCAGACACCAAGCCAGGCATCGAGGGATAAGGAGGAGATGCTCAGTCACTATAGTTTCTTaGGGCATTTCCTCGCGCTGC +
Preference number: 5 (lower is better)
Translates to: GLFARHQARHRGIRRRCSVTIVS*GISSRC
Trigger: GCAGCGCGAGGAAATGCCCAAAGAAACTATAGTGAC...TGAGCATCTCCTCCTTATCCCTCGATGCCTGGCTTGGTGTCTGGCAAACAGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297438.6
CDS-3UTR CAA 90 bp GGACTGTTTGCCAGACACCAAGCCAGGCATCGAGGGATAAGGAGGAGATGCTCAAACACTGGATCCACTTaGCCACGCAACTTTCCTTTG +
Preference number: 5 (lower is better)
Translates to: GLFARHQARHRGIRRRCSNTGST*PRNFPL
Trigger: CAAAGGAAAGTTGCGTGGCAAAGTGGATCCAGTGTT...TGAGCATCTCCTCCTTATCCCTCGATGCCTGGCTTGGTGTCTGGCAAACAGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR CAA 90 bp TGTAAGATGCTGCAGGACCTTGCACCACCCTTTGAACAGCAAGGTGACCCATTAAATCCAGCGTTCCAGTaGCCAGCGCTACATTCTCAG +
Preference number: 5 (lower is better)
Translates to: CKMLQDLAPPFEQQGDPLNPAFQ*PALHSQ
Trigger: CTGAGAATGTAGCGCTGGCAACTGGAACGCTGGATT...TAATGGGTCACCTTGCTGTTCAAAGGGTGGTGCAAGGTCCTGCAGCATCTTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR CAA 90 bp ACATCTGCTAATTATGGACTGTTTGCCAGACACCAAGCCAGGCATCGAGGGATAAGTACTGCAACTGGATaGGATGATCGGCCCTCAAGG +
Preference number: 5 (lower is better)
Translates to: TSANYGLFARHQARHRGISTATG*DDRPSR
Trigger: CCTTGAGGGCCGATCATCCAATCCAGTTGCAGTACT...TATCCCTCGATGCCTGGCTTGGTGTCTGGCAAACAGTCCATAATTAGCAGATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR CAA 90 bp TTTGCCAGACACCAAGCCAGGCATCGAGGGATAAGGAGGAGATGCTCACATCATAACACTGGATCCACTTaGCCACGCAACTTTCCTTTG +
Preference number: 5 (lower is better)
Translates to: FARHQARHRGIRRRCSHHNTGST*PRNFPL
Trigger: CAAAGGAAAGTTGCGTGGCAAAGTGGATCCAGTGTT...ATGATGTGAGCATCTCCTCCTTATCCCTCGATGCCTGGCTTGGTGTCTGGCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR CAA 90 bp CTTTCAACATCTGCTAATTATGGACTGTTTGCCAGACACCAAGCCAGGCATCGAAGATGCTGCAGGACCTaGCACCACCCTTTGAACAGC +
Preference number: 5 (lower is better)
Translates to: LSTSANYGLFARHQARHRRCCRT*HHPLNS
Trigger: GCTGTTCAAAGGGTGGTGCAAGGTCCTGCAGCATCT...TCGATGCCTGGCTTGGTGTCTGGCAAACAGTCCATAATTAGCAGATGTTGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR CAA 90 bp GGACTGTTTGCCAGACACCAAGCCAGGCATCGAGGGATAAGGAGGAGATGCTCAGAGCATACATATCCCTaGGGGATCTTGTTAAAATGC +
Preference number: 5 (lower is better)
Translates to: GLFARHQARHRGIRRRCSEHTYP*GILLKC
Trigger: GCATTTTAACAAGATCCCCAAGGGATATGTATGCTC...TGAGCATCTCCTCCTTATCCCTCGATGCCTGGCTTGGTGTCTGGCAAACAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR CAA 90 bp GGACTGTTTGCCAGACACCAAGCCAGGCATCGAGGGATAAGGAGGAGATGCTCAGATCTCTGTAGAGTCTaGATACGGAAGTTATGTAAG +
Preference number: 5 (lower is better)
Translates to: GLFARHQARHRGIRRRCSDLCRV*IRKLCK
Trigger: CTTACATAACTTCCGTATCAAGACTCTACAGAGATC...TGAGCATCTCCTCCTTATCCCTCGATGCCTGGCTTGGTGTCTGGCAAACAGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR CAA 90 bp CTTTCAACATCTGCTAATTATGGACTGTTTGCCAGACACCAAGCCAGGCATCGAAATCCAGCGTTCCAGTaGCCAGCGCTACATTCTCAG +
Preference number: 5 (lower is better)
Translates to: LSTSANYGLFARHQARHRNPAFQ*PALHSQ
Trigger: CTGAGAATGTAGCGCTGGCAACTGGAACGCTGGATT...TCGATGCCTGGCTTGGTGTCTGGCAAACAGTCCATAATTAGCAGATGTTGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR CAA 90 bp GGACTGTTTGCCAGACACCAAGCCAGGCATCGAGGGATAAGGAGGAGATGCTCACCCAATGCAAAAAGGTaGGCTTCTTTAATACACTCA +
Preference number: 5 (lower is better)
Translates to: GLFARHQARHRGIRRRCSPNAKR*ASLIHS
Trigger: TGAGTGTATTAAAGAAGCCAACCTTTTTGCATTGGG...TGAGCATCTCCTCCTTATCCCTCGATGCCTGGCTTGGTGTCTGGCAAACAGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR CAA 90 bp GGACTGTTTGCCAGACACCAAGCCAGGCATCGAGGGATAAGGAGGAGATGCTCAAAAAATCGAACAAAATaGTCTCCAACCAAAGGACCC +
Preference number: 5 (lower is better)
Translates to: GLFARHQARHRGIRRRCSKNRTK*SPTKGP
Trigger: GGGTCCTTTGGTTGGAGACAATTTTGTTCGATTTTT...TGAGCATCTCCTCCTTATCCCTCGATGCCTGGCTTGGTGTCTGGCAAACAGTCC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR CAA 90 bp ACATCTGCTAATTATGGACTGTTTGCCAGACACCAAGCCAGGCATCGAGGGATACTAATTATGGACTGTTaGCCAGACACCAAGCCAGGC +
Preference number: 5 (lower is better)
Translates to: TSANYGLFARHQARHRGILIMDC*PDTKPG
Trigger: GCCTGGCTTGGTGTCTGGCAAACAGTCCATAATTAG...TATCCCTCGATGCCTGGCTTGGTGTCTGGCAAACAGTCCATAATTAGCAGATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR CAA 90 bp TGTAAGATGCTGCAGGACCTTGCACCACCCTTTGAACAGCAAGGTGACCCATTAACTTTTCGCCCCAAGTaGTCACCAAAGTATTGCACT +
Preference number: 5 (lower is better)
Translates to: CKMLQDLAPPFEQQGDPLTFRPK*SPKYCT
Trigger: AGTGCAATACTTTGGTGACAACTTGGGGCGAAAAGT...TAATGGGTCACCTTGCTGTTCAAAGGGTGGTGCAAGGTCCTGCAGCATCTTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR CAA 90 bp GGACTGTTTGCCAGACACCAAGCCAGGCATCGAGGGATAAGGAGGAGATGCTCACTCCAAATTCAGGCATaGAATGAAACACAAAAGGAA +
Preference number: 5 (lower is better)
Translates to: GLFARHQARHRGIRRRCSLQIQA*NETQKE
Trigger: TTCCTTTTGTGTTTCATTCAATGCCTGAATTTGGAG...TGAGCATCTCCTCCTTATCCCTCGATGCCTGGCTTGGTGTCTGGCAAACAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR CAA 90 bp ACATCTGCTAATTATGGACTGTTTGCCAGACACCAAGCCAGGCATCGAGGGATAAACACTGGATCCACTTaGCCACGCAACTTTCCTTTG +
Preference number: 5 (lower is better)
Translates to: TSANYGLFARHQARHRGINTGST*PRNFPL
Trigger: CAAAGGAAAGTTGCGTGGCAAAGTGGATCCAGTGTT...TATCCCTCGATGCCTGGCTTGGTGTCTGGCAAACAGTCCATAATTAGCAGATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR CAA 90 bp TTTGCCAGACACCAAGCCAGGCATCGAGGGATAAGGAGGAGATGCTCACATCATCAATCCAGAAACGCTTaGGAGAACACATTTCATGTC +
Preference number: 5 (lower is better)
Translates to: FARHQARHRGIRRRCSHHQSRNA*ENTFHV
Trigger: GACATGAAATGTGTTCTCCAAAGCGTTTCTGGATTG...ATGATGTGAGCATCTCCTCCTTATCCCTCGATGCCTGGCTTGGTGTCTGGCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR CAA 90 bp TTTGCCAGACACCAAGCCAGGCATCGAGGGATAAGGAGGAGATGCTCACATCATTGGCAGTGTTTCTATTaGTCTGACAGTGACACCTTT +
Preference number: 5 (lower is better)
Translates to: FARHQARHRGIRRRCSHHWQCFY*SDSDTF
Trigger: AAAGGTGTCACTGTCAGACAAATAGAAACACTGCCA...ATGATGTGAGCATCTCCTCCTTATCCCTCGATGCCTGGCTTGGTGTCTGGCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR CAA 90 bp GGACTGTTTGCCAGACACCAAGCCAGGCATCGAGGGATAAGGAGGAGATGCTCATTAAGTTACACCAAGTaGGCAGTGTTTCTATTTGTC +
Preference number: 5 (lower is better)
Translates to: GLFARHQARHRGIRRRCSLSYTK*AVFLFV
Trigger: GACAAATAGAAACACTGCCAACTTGGTGTAACTTAA...TGAGCATCTCCTCCTTATCCCTCGATGCCTGGCTTGGTGTCTGGCAAACAGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR CAA 90 bp TTTGCCAGACACCAAGCCAGGCATCGAGGGATAAGGAGGAGATGCTCACATCATGAGCATACATATCCCTaGGGGATCTTGTTAAAATGC +
Preference number: 5 (lower is better)
Translates to: FARHQARHRGIRRRCSHHEHTYP*GILLKC
Trigger: GCATTTTAACAAGATCCCCAAGGGATATGTATGCTC...ATGATGTGAGCATCTCCTCCTTATCCCTCGATGCCTGGCTTGGTGTCTGGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR CAA 90 bp TGTAAGATGCTGCAGGACCTTGCACCACCCTTTGAACAGCAAGGTGACCCATTAACAGGACAGCTTGGATaGAGGAAGAACTCAGGAAAT +
Preference number: 5 (lower is better)
Translates to: CKMLQDLAPPFEQQGDPLTGQLG*RKNSGN
Trigger: ATTTCCTGAGTTCTTCCTCAATCCAAGCTGTCCTGT...TAATGGGTCACCTTGCTGTTCAAAGGGTGGTGCAAGGTCCTGCAGCATCTTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR CAA 90 bp CTTTCAACATCTGCTAATTATGGACTGTTTGCCAGACACCAAGCCAGGCATCGACTAATTATGGACTGTTaGCCAGACACCAAGCCAGGC +
Preference number: 5 (lower is better)
Translates to: LSTSANYGLFARHQARHRLIMDC*PDTKPG
Trigger: GCCTGGCTTGGTGTCTGGCAAACAGTCCATAATTAG...TCGATGCCTGGCTTGGTGTCTGGCAAACAGTCCATAATTAGCAGATGTTGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS CCA 90 bp CAGCATCTGGATGAAGAAGTGTATCGAAAAGTACTGCAACTGGATTaGATGATCGGCCCTCAAGGCCCTCAGACAAGTATTCTAAGTCCT +
Preference number: 5 (lower is better)
Translates to: QHLDEEVYRKVLQLD*MIGPQGPQTSILSP
Trigger: AGGACTTAGAATACTTGTCTGAGGGCCTTGAGGGCCGATCATCCAATCCAGTTGCAGTACTTTTCGATACACTTCTTCATCCAGATGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000520659.1
ENST00000647849.1
CDS-3UTR CAA 90 bp TTTGCCAGACACCAAGCCAGGCATCGAGGGATAAGGAGGAGATGCTCACATCATAAAAATCGAACAAAATaGTCTCCAACCAAAGGACCC +
Preference number: 5 (lower is better)
Translates to: FARHQARHRGIRRRCSHHKNRTK*SPTKGP
Trigger: GGGTCCTTTGGTTGGAGACAATTTTGTTCGATTTTT...ATGATGTGAGCATCTCCTCCTTATCCCTCGATGCCTGGCTTGGTGTCTGGCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR CAA 90 bp TGTAAGATGCTGCAGGACCTTGCACCACCCTTTGAACAGCAAGGTGACCCATTAGAGCATACATATCCCTaGGGGATCTTGTTAAAATGC +
Preference number: 5 (lower is better)
Translates to: CKMLQDLAPPFEQQGDPLEHTYP*GILLKC
Trigger: GCATTTTAACAAGATCCCCAAGGGATATGTATGCTC...TAATGGGTCACCTTGCTGTTCAAAGGGTGGTGCAAGGTCCTGCAGCATCTTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR CAA 90 bp TGTAAGATGCTGCAGGACCTTGCACCACCCTTTGAACAGCAAGGTGACCCATTAAATAACTGTGGACTTTaGAGACACAAGGGGATGTCA +
Preference number: 5 (lower is better)
Translates to: CKMLQDLAPPFEQQGDPLNNCGL*RHKGMS
Trigger: TGACATCCCCTTGTGTCTCAAAAGTCCACAGTTATT...TAATGGGTCACCTTGCTGTTCAAAGGGTGGTGCAAGGTCCTGCAGCATCTTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR CAA 90 bp CTTTCAACATCTGCTAATTATGGACTGTTTGCCAGACACCAAGCCAGGCATCGAACTTTTCGCCCCAAGTaGTCACCAAAGTATTGCACT +
Preference number: 5 (lower is better)
Translates to: LSTSANYGLFARHQARHRTFRPK*SPKYCT
Trigger: AGTGCAATACTTTGGTGACAACTTGGGGCGAAAAGT...TCGATGCCTGGCTTGGTGTCTGGCAAACAGTCCATAATTAGCAGATGTTGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR CAA 90 bp TGTAAGATGCTGCAGGACCTTGCACCACCCTTTGAACAGCAAGGTGACCCATTAGATCTCTGTAGAGTCTaGATACGGAAGTTATGTAAG +
Preference number: 5 (lower is better)
Translates to: CKMLQDLAPPFEQQGDPLDLCRV*IRKLCK
Trigger: CTTACATAACTTCCGTATCAAGACTCTACAGAGATC...TAATGGGTCACCTTGCTGTTCAAAGGGTGGTGCAAGGTCCTGCAGCATCTTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR CAA 90 bp TTTGCCAGACACCAAGCCAGGCATCGAGGGATAAGGAGGAGATGCTCACATCATCTCCAAATTCAGGCATaGAATGAAACACAAAAGGAA +
Preference number: 5 (lower is better)
Translates to: FARHQARHRGIRRRCSHHLQIQA*NETQKE
Trigger: TTCCTTTTGTGTTTCATTCAATGCCTGAATTTGGAG...ATGATGTGAGCATCTCCTCCTTATCCCTCGATGCCTGGCTTGGTGTCTGGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR CAA 90 bp ACATCTGCTAATTATGGACTGTTTGCCAGACACCAAGCCAGGCATCGAGGGATACCACGCAACTTTCCTTaGTTTATAGCAGCTCCAAAT +
Preference number: 5 (lower is better)
Translates to: TSANYGLFARHQARHRGIPRNFP*FIAAPN
Trigger: ATTTGGAGCTGCTATAAACAAAGGAAAGTTGCGTGG...TATCCCTCGATGCCTGGCTTGGTGTCTGGCAAACAGTCCATAATTAGCAGATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR CAA 90 bp TTTGCCAGACACCAAGCCAGGCATCGAGGGATAAGGAGGAGATGCTCACATCATTCAGGATACAGCTTTTaGGGAAGCTGTTTGAAAATT +
Preference number: 5 (lower is better)
Translates to: FARHQARHRGIRRRCSHHSGYSF*GSCLKI
Trigger: AATTTTCAAACAGCTTCCCAAAAAGCTGTATCCTGA...ATGATGTGAGCATCTCCTCCTTATCCCTCGATGCCTGGCTTGGTGTCTGGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR CAA 90 bp TGTAAGATGCTGCAGGACCTTGCACCACCCTTTGAACAGCAAGGTGACCCATTATCTCTGAAAAACATCTaGGTGAGTTCTTGGATGTCA +
Preference number: 5 (lower is better)
Translates to: CKMLQDLAPPFEQQGDPLSLKNI*VSSWMS
Trigger: TGACATCCAAGAACTCACCAAGATGTTTTTCAGAGA...TAATGGGTCACCTTGCTGTTCAAAGGGTGGTGCAAGGTCCTGCAGCATCTTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR CAA 90 bp CTTTCAACATCTGCTAATTATGGACTGTTTGCCAGACACCAAGCCAGGCATCGAACAGGACAGCTTGGATaGAGGAAGAACTCAGGAAAT +
Preference number: 5 (lower is better)
Translates to: LSTSANYGLFARHQARHRTGQLG*RKNSGN
Trigger: ATTTCCTGAGTTCTTCCTCAATCCAAGCTGTCCTGT...TCGATGCCTGGCTTGGTGTCTGGCAAACAGTCCATAATTAGCAGATGTTGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR CAA 90 bp ACATCTGCTAATTATGGACTGTTTGCCAGACACCAAGCCAGGCATCGAGGGATAGATCTCTGTAGAGTCTaGATACGGAAGTTATGTAAG +
Preference number: 5 (lower is better)
Translates to: TSANYGLFARHQARHRGIDLCRV*IRKLCK
Trigger: CTTACATAACTTCCGTATCAAGACTCTACAGAGATC...TATCCCTCGATGCCTGGCTTGGTGTCTGGCAAACAGTCCATAATTAGCAGATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR CAA 90 bp CTTTCAACATCTGCTAATTATGGACTGTTTGCCAGACACCAAGCCAGGCATCGACATCTTGGTGAGTTCTaGGATGTCAAAGTGTATACC +
Preference number: 5 (lower is better)
Translates to: LSTSANYGLFARHQARHRHLGEF*DVKVYT
Trigger: GGTATACACTTTGACATCCAAGAACTCACCAAGATG...TCGATGCCTGGCTTGGTGTCTGGCAAACAGTCCATAATTAGCAGATGTTGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR CAA 90 bp ACATCTGCTAATTATGGACTGTTTGCCAGACACCAAGCCAGGCATCGAGGGATACTCCAAATTCAGGCATaGAATGAAACACAAAAGGAA +
Preference number: 5 (lower is better)
Translates to: TSANYGLFARHQARHRGILQIQA*NETQKE
Trigger: TTCCTTTTGTGTTTCATTCAATGCCTGAATTTGGAG...TATCCCTCGATGCCTGGCTTGGTGTCTGGCAAACAGTCCATAATTAGCAGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR CAA 90 bp CTTTCAACATCTGCTAATTATGGACTGTTTGCCAGACACCAAGCCAGGCATCGAAAAAATCGAACAAAATaGTCTCCAACCAAAGGACCC +
Preference number: 5 (lower is better)
Translates to: LSTSANYGLFARHQARHRKNRTK*SPTKGP
Trigger: GGGTCCTTTGGTTGGAGACAATTTTGTTCGATTTTT...TCGATGCCTGGCTTGGTGTCTGGCAAACAGTCCATAATTAGCAGATGTTGAAAG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS TCA 90 bp ACTCATAGGTATATGTATCTATTTCCACAGGATTACCCTTACATGTaGTTGGCTGGCTTGACTTATGGCCTAGGTAACACCCTTGATCCT +
Preference number: 5 (lower is better)
Translates to: THRYMYLFPQDYPYM*LAGLTYGLGNTLDP
Trigger: AGGATCAAGGGTGTTACCTAGGCCATAAGTCAAGCCAGCCAATCACATGTAAGGGTAATCCTGTGGAAATAGATACATATACCTATGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR CAA 90 bp CTGAAGCAAGTGCAGTCAGAGAATGTTATTTCATTAAGATGTGAAACTGGTTTGCTAATTATGGACTGTTaGCCAGACACCAAGCCAGGC +
Preference number: 5 (lower is better)
Translates to: LKQVQSENVISLRCETGLLIMDC*PDTKPG
Trigger: GCCTGGCTTGGTGTCTGGCAAACAGTCCATAATTAG...CAAACCAGTTTCACATCTTAATGAAATAACATTCTCTGACTGCACTTGCTTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR CAA 90 bp CTGAAGCAAGTGCAGTCAGAGAATGTTATTTCATTAAGATGTGAAACTGGTTTGAATGCAGGAAGTAAGTaGTGGGGCCTGAGAGTTTAC +
Preference number: 5 (lower is better)
Translates to: LKQVQSENVISLRCETGLNAGSK*WGLRVY
Trigger: GTAAACTCTCAGGCCCCACAACTTACTTCCTGCATT...CAAACCAGTTTCACATCTTAATGAAATAACATTCTCTGACTGCACTTGCTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR CAA 90 bp CTGAAGCAAGTGCAGTCAGAGAATGTTATTTCATTAAGATGTGAAACTGGTTTGACTTTTCGCCCCAAGTaGTCACCAAAGTATTGCACT +
Preference number: 5 (lower is better)
Translates to: LKQVQSENVISLRCETGLTFRPK*SPKYCT
Trigger: AGTGCAATACTTTGGTGACAACTTGGGGCGAAAAGT...CAAACCAGTTTCACATCTTAATGAAATAACATTCTCTGACTGCACTTGCTTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR CAA 90 bp AGAGTACTGAAGCAAGTGCAGTCAGAGAATGTTATTTCATTAAGATGTGAAACTAATGCAGGAAGTAAGTaGTGGGGCCTGAGAGTTTAC +
Preference number: 5 (lower is better)
Translates to: RVLKQVQSENVISLRCETNAGSK*WGLRVY
Trigger: GTAAACTCTCAGGCCCCACAACTTACTTCCTGCATT...AGTTTCACATCTTAATGAAATAACATTCTCTGACTGCACTTGCTTCAGTACTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR CAA 90 bp CTGAAGCAAGTGCAGTCAGAGAATGTTATTTCATTAAGATGTGAAACTGGTTTGCATCTTGGTGAGTTCTaGGATGTCAAAGTGTATACC +
Preference number: 5 (lower is better)
Translates to: LKQVQSENVISLRCETGLHLGEF*DVKVYT
Trigger: GGTATACACTTTGACATCCAAGAACTCACCAAGATG...CAAACCAGTTTCACATCTTAATGAAATAACATTCTCTGACTGCACTTGCTTCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR CAA 90 bp CTGAAGCAAGTGCAGTCAGAGAATGTTATTTCATTAAGATGTGAAACTGGTTTGAATAACTGTGGACTTTaGAGACACAAGGGGATGTCA +
Preference number: 5 (lower is better)
Translates to: LKQVQSENVISLRCETGLNNCGL*RHKGMS
Trigger: TGACATCCCCTTGTGTCTCAAAAGTCCACAGTTATT...CAAACCAGTTTCACATCTTAATGAAATAACATTCTCTGACTGCACTTGCTTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS GCA 90 bp CTTCAGAAAAGACAGATTAGGATGAGAACCTATCAATACTACTGCTaGAGACAGCTTAAATATTTTCTTCAATCCAGAAACGCTTTGGAG +
Preference number: 5 (lower is better)
Translates to: LQKRQIRMRTYQYYC*RQLKYFLQSRNALE
Trigger: CTCCAAAGCGTTTCTGGATTGAAGAAAATATTTAAGCTGTCTGCAGCAGTAGTATTGATAGGTTCTCATCCTAATCTGTCTTTTCTGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR CAA 90 bp AGAGTACTGAAGCAAGTGCAGTCAGAGAATGTTATTTCATTAAGATGTGAAACTCCACGCAACTTTCCTTaGTTTATAGCAGCTCCAAAT +
Preference number: 5 (lower is better)
Translates to: RVLKQVQSENVISLRCETPRNFP*FIAAPN
Trigger: ATTTGGAGCTGCTATAAACAAAGGAAAGTTGCGTGG...AGTTTCACATCTTAATGAAATAACATTCTCTGACTGCACTTGCTTCAGTACTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR CAA 90 bp AGAGTACTGAAGCAAGTGCAGTCAGAGAATGTTATTTCATTAAGATGTGAAACTCAATCCAGAAACGCTTaGGAGAACACATTTCATGTC +
Preference number: 5 (lower is better)
Translates to: RVLKQVQSENVISLRCETQSRNA*ENTFHV
Trigger: GACATGAAATGTGTTCTCCAAAGCGTTTCTGGATTG...AGTTTCACATCTTAATGAAATAACATTCTCTGACTGCACTTGCTTCAGTACTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR CAA 90 bp CTGAAGCAAGTGCAGTCAGAGAATGTTATTTCATTAAGATGTGAAACTGGTTTGCCCAATGCAAAAAGGTaGGCTTCTTTAATACACTCA +
Preference number: 5 (lower is better)
Translates to: LKQVQSENVISLRCETGLPNAKR*ASLIHS
Trigger: TGAGTGTATTAAAGAAGCCAACCTTTTTGCATTGGG...CAAACCAGTTTCACATCTTAATGAAATAACATTCTCTGACTGCACTTGCTTCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS TCA 90 bp GATAGACTTTATGATATTCAGGATACAGCTTTTTGGGAAGCTGTTTaGAAATTAAGCTTGGATCAGTTACTCGTCTGCGAAACACATGAA +
Preference number: 5 (lower is better)
Translates to: DRLYDIQDTAFWEAV*KLSLDQLLVCETHE
Trigger: TTCATGTGTTTCGCAGACGAGTAACTGATCCAAGCTTAATTTTCAAACAGCTTCCCAAAAAGCTGTATCCTGAATATCATAAAGTCTATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS GCA 90 bp ATCCTTCAGAAAAGACAGATTAGGATGAGAACCTATCAATACTACTaGTGCAGACAGCTTAAATATTTTCTTCAATCCAGAAACGCTTTG +
Preference number: 5 (lower is better)
Translates to: ILQKRQIRMRTYQYY*CRQLKYFLQSRNAL
Trigger: CAAAGCGTTTCTGGATTGAAGAAAATATTTAAGCTGTCTGCAGCAGTAGTATTGATAGGTTCTCATCCTAATCTGTCTTTTCTGAAGGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR CAA 90 bp CTGAAGCAAGTGCAGTCAGAGAATGTTATTTCATTAAGATGTGAAACTGGTTTGTCAGGATACAGCTTTTaGGGAAGCTGTTTGAAAATT +
Preference number: 5 (lower is better)
Translates to: LKQVQSENVISLRCETGLSGYSF*GSCLKI
Trigger: AATTTTCAAACAGCTTCCCAAAAAGCTGTATCCTGA...CAAACCAGTTTCACATCTTAATGAAATAACATTCTCTGACTGCACTTGCTTCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR CAA 90 bp AGAGTACTGAAGCAAGTGCAGTCAGAGAATGTTATTTCATTAAGATGTGAAACTTCTCTGAAAAACATCTaGGTGAGTTCTTGGATGTCA +
Preference number: 5 (lower is better)
Translates to: RVLKQVQSENVISLRCETSLKNI*VSSWMS
Trigger: TGACATCCAAGAACTCACCAAGATGTTTTTCAGAGA...AGTTTCACATCTTAATGAAATAACATTCTCTGACTGCACTTGCTTCAGTACTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS-3UTR CAA 90 bp AGAGTACTGAAGCAAGTGCAGTCAGAGAATGTTATTTCATTAAGATGTGAAACTTCAGGATACAGCTTTTaGGGAAGCTGTTTGAAAATT +
Preference number: 5 (lower is better)
Translates to: RVLKQVQSENVISLRCETSGYSF*GSCLKI
Trigger: AATTTTCAAACAGCTTCCCAAAAAGCTGTATCCTGA...AGTTTCACATCTTAATGAAATAACATTCTCTGACTGCACTTGCTTCAGTACTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS CCA 72 bp GGTGCCTCTCCCGCTGACCCCCGCATCACAGTTACCTaGAGGACTCACCAAACCACAGGTGCCCGGGACCCG +
Preference number: 6 (lower is better)
Translates to: GASPADPRITVT*RTHQTTGARDP
Trigger: CGGGTCCCGGGCACCTGTGGTTTGGTGAGTCCTCCAGGTAACTGTGATGCGGGGGTCAGCGGGAGAGGCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297438.6
CDS CCA 72 bp ACAGGTGCCCGGGACCCGCCCACCACGCTTCTTTTATaGAAGTCCCGCTTCCGGGAAGAGGTCATCCTCCCC +
Preference number: 6 (lower is better)
Translates to: TGARDPPTTLLL*KSRFREEVILP
Trigger: GGGGAGGATGACCTCTTCCCGGAAGCGGGACTTCCATAAAAGAAGCGTGGTGGGCGGGTCCCGGGCACCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297438.6
CDS GCA 72 bp AGTGTCACTATAGTTTCTTTGGGCATTTCCTCGCGCTaGCGGGGTGCAGACGCCGGGAGCTTCCGGGTGCCT +
Preference number: 6 (lower is better)
Translates to: SVTIVSLGISSR*RGADAGSFRVP
Trigger: AGGCACCCGGAAGCTCCCGGCGTCTGCACCCCGGCAGCGCGAGGAAATGCCCAAAGAAACTATAGTGACACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297438.6
CDS TCA 72 bp AACACCCACAAGTGTAGGAATTACCAGCACGCCGGGTaGAAATCCAGGTGCTCATCAGGCCCGCCCCAGACC +
Preference number: 6 (lower is better)
Translates to: NTHKCRNYQHAG*KSRCSSGPPQT
Trigger: GGTCTGGGGCGGGCCTGATGAGCACCTGGATTTTCACCCGGCGTGCTGGTAATTCCTACACTTGTGGGTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297438.6
CDS GCA 72 bp CATCACAGTTACCTGGAGGACTCACCAAACCACAGGTaGCCGGGACCCGCCCACCACGCTTCTTTTATGGAA +
Preference number: 6 (lower is better)
Translates to: HHSYLEDSPNHR*PGPAHHASFME
Trigger: TTCCATAAAAGAAGCGTGGTGGGCGGGTCCCGGGCACCTGTGGTTTGGTGAGTCCTCCAGGTAACTGTGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297438.6
CDS GCA 72 bp AATTTCCAGATGGGCAGGAGAATCCAGCGTTCCAGTTaGCAGCGCTACATTCTCAGCAAAGAGGCAGAAGGG +
Preference number: 6 (lower is better)
Translates to: NFQMGRRIQRSS*QRYILSKEAEG
Trigger: CCCTTCTGCCTCTTTGCTGAGAATGTAGCGCTGGCAACTGGAACGCTGGATTCTCCTGCCCATCTGGAAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS CAA 72 bp CAATTTCCAGATGGGCAGGAGAATCCAGCGTTCCAGTaGCCAGCGCTACATTCTCAGCAAAGAGGCAGAAGG +
Preference number: 6 (lower is better)
Translates to: QFPDGQENPAFQ*PALHSQQRGRR
Trigger: CCTTCTGCCTCTTTGCTGAGAATGTAGCGCTGGCAACTGGAACGCTGGATTCTCCTGCCCATCTGGAAATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS CAA 90 bp TCAGCGGCAGTAAGCCCAGAACCTACAATTAACACTGGATCCACTTaGCCACGCAACTTTCCTTTGTTTATAGCAGCTCCAAATTCAGGC +
Preference number: 6 (lower is better)
Translates to: SAAVSPEPTINTGST*PRNFPLFIAAPNSG
Trigger: GCCTGAATTTGGAGCTGCTATAAACAAAGGAAAGTTGCGTGGCAAAGTGGATCCAGTGTTAATTGTAGGTTCTGGGCTTACTGCCGCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS CCA 72 bp GATGAAGAAGTGTATCGAAAAGTACTGCAACTGGATTaGATGATCGGCCCTCAAGGCCCTCAGACAAGTATT +
Preference number: 6 (lower is better)
Translates to: DEEVYRKVLQLD*MIGPQGPQTSI
Trigger: AATACTTGTCTGAGGGCCTTGAGGGCCGATCATCCAATCCAGTTGCAGTACTTTTCGATACACTTCTTCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000520659.1
ENST00000647849.1
CDS CAA 72 bp GTAAGCCCAGAACCTACAATTAACACTGGATCCACTTaGCCACGCAACTTTCCTTTGTTTATAGCAGCTCCA +
Preference number: 6 (lower is better)
Translates to: VSPEPTINTGST*PRNFPLFIAAP
Trigger: TGGAGCTGCTATAAACAAAGGAAAGTTGCGTGGCAAAGTGGATCCAGTGTTAATTGTAGGTTCTGGGCTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS TCA 72 bp TATATGTATCTATTTCCACAGGATTACCCTTACATGTaGTTGGCTGGCTTGACTTATGGCCTAGGTAACACC +
Preference number: 6 (lower is better)
Translates to: YMYLFPQDYPYM*LAGLTYGLGNT
Trigger: GGTGTTACCTAGGCCATAAGTCAAGCCAGCCAATCACATGTAAGGGTAATCCTGTGGAAATAGATACATATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS CCA 72 bp CAAAACGGATGGATAATCATACCCAAAGTCAGCATCTaGATGAAGAAGTGTATCGAAAAGTACTGCAACTGG +
Preference number: 6 (lower is better)
Translates to: QNGWIIIPKVSI*MKKCIEKYCNW
Trigger: CCAGTTGCAGTACTTTTCGATACACTTCTTCATCCAGATGCTGACTTTGGGTATGATTATCCATCCGTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000520659.1
ENST00000647849.1
CDS CAA 90 bp TACTGCTGCAGACAGCTTAAATATTTTCTTCAATCCAGAAACGCTTaGGAGAACACATTTCATGTCCGACTTAAAGGAAAGCACACGGTG +
Preference number: 6 (lower is better)
Translates to: YCCRQLKYFLQSRNA*ENTFHVRLKGKHTV
Trigger: CACCGTGTGCTTTCCTTTAAGTCGGACATGAAATGTGTTCTCCAAAGCGTTTCTGGATTGAAGAAAATATTTAAGCTGTCTGCAGCAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS CAA 90 bp AAAGCACACGGTGCTCGGGAAAGCTGGTATAATCAGATAAAAGATTaGAGTCTACAGAATATGACTGAGTACACATCATATGATAGACTT +
Preference number: 6 (lower is better)
Translates to: KAHGARESWYNQIKD*SLQNMTEYTSYDRL
Trigger: AAGTCTATCATATGATGTGTACTCAGTCATATTCTGTAGACTCAAATCTTTTATCTGATTATACCAGCTTTCCCGAGCACCGTGTGCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS GCA 72 bp AAATCGAACAAAATTGTCTCCAACCAAAGGACCCAATaGAAAAAGGTTGGCTTCTTTAATACACTCATAGGT +
Preference number: 6 (lower is better)
Translates to: KSNKIVSNQRTQ*KKVGFFNTLIG
Trigger: ACCTATGAGTGTATTAAAGAAGCCAACCTTTTTGCATTGGGTCCTTTGGTTGGAGACAATTTTGTTCGATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS CAA 72 bp GGTGCTCGGGAAAGCTGGTATAATCAGATAAAAGATTaGAGTCTACAGAATATGACTGAGTACACATCATAT +
Preference number: 6 (lower is better)
Translates to: GARESWYNQIKD*SLQNMTEYTSY
Trigger: ATATGATGTGTACTCAGTCATATTCTGTAGACTCAAATCTTTTATCTGATTATACCAGCTTTCCCGAGCACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS GCA 72 bp AGACAGATTAGGATGAGAACCTATCAATACTACTGCTaGAGACAGCTTAAATATTTTCTTCAATCCAGAAAC +
Preference number: 6 (lower is better)
Translates to: RQIRMRTYQYYC*RQLKYFLQSRN
Trigger: GTTTCTGGATTGAAGAAAATATTTAAGCTGTCTGCAGCAGTAGTATTGATAGGTTCTCATCCTAATCTGTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1
CDS CAA 72 bp AGACAGCTTAAATATTTTCTTCAATCCAGAAACGCTTaGGAGAACACATTTCATGTCCGACTTAAAGGAAAG +
Preference number: 6 (lower is better)
Translates to: RQLKYFLQSRNA*ENTFHVRLKGK
Trigger: CTTTCCTTTAAGTCGGACATGAAATGTGTTCTCCAAAGCGTTTCTGGATTGAAGAAAATATTTAAGCTGTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297438.6
ENST00000451899.7
ENST00000647849.1