RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OSGIN1 (Homo sapiens)

Ensembl gene IDs: ENSG00000140961

Ensembl transcript IDs: ENST00000343939.6, ENST00000361711.7, ENST00000393306.6, ENST00000563248.2, ENST00000563543.1, ENST00000565123.5, ENST00000566667.2, ENST00000567707.1

Found 362 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCTCCCCGGGGCATCTTTGGACGGGTCCTGCATCCAGCAGGGATGTaGTCATCTCTGTCCTCTCAGGGCCTGGGAGCCAGCGGGTCTGGC +
Preference number: 1 (lower is better)
Translates to: PPRGIFGRVLHPAGM*SSLSSQGLGASGSG
Trigger: GCCAGACCCGCTGGCTCCCAGGCCCTGAGAGGACAGAGATGACCACATCCCTGCTGGATGCAGGACCCGTCCAAAGATGCCCCGGGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
3UTR GCA 90 bp CCAGCAGCTTTCCCCACAAATCCCAGGTCTAGGCCAACCCTGGCCTaGGGCCGCTGTTACCACCTCAGACACTGGTCTAAGTCCAGGGCA +
Preference number: 1 (lower is better)
Translates to: PAAFPTNPRSRPTLA*GRCYHLRHWSKSRA
Trigger: TGCCCTGGACTTAGACCAGTGTCTGAGGTGGTAACAGCGGCCGCAGGCCAGGGTTGGCCTAGACCTGGGATTTGTGGGGAAAGCTGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
3UTR GCA 90 bp TGGGCACTGGCTTTATTTGGGACCTGCTTCTGGAAGGCGCAGGGCTaGAGGTCTCCTGGCTGGGTGCTCAGCTGGTCACACCAGCAGCTT +
Preference number: 1 (lower is better)
Translates to: WALALFGTCFWKAQG*RSPGWVLSWSHQQL
Trigger: AAGCTGCTGGTGTGACCAGCTGAGCACCCAGCCAGGAGACCTGCAGCCCTGCGCCTTCCAGAAGCAGGTCCCAAATAAAGCCAGTGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
3UTR CCA 90 bp TTCTGGAAGGCGCAGGGCTGCAGGTCTCCTGGCTGGGTGCTCAGCTaGTCACACCAGCAGCTTTCCCCACAAATCCCAGGTCTAGGCCAA +
Preference number: 1 (lower is better)
Translates to: FWKAQGCRSPGWVLS*SHQQLSPQIPGLGQ
Trigger: TTGGCCTAGACCTGGGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAGCACCCAGCCAGGAGACCTGCAGCCCTGCGCCTTCCAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
3UTR CCA 90 bp TTTGGGACCTGCTTCTGGAAGGCGCAGGGCTGCAGGTCTCCTGGCTaGGTGCTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCCA +
Preference number: 1 (lower is better)
Translates to: FGTCFWKAQGCRSPG*VLSWSHQQLSPQIP
Trigger: TGGGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAGCACCCAGCCAGGAGACCTGCAGCCCTGCGCCTTCCAGAAGCAGGTCCCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
3UTR CCA 90 bp TCACACCAGCAGCTTTCCCCACAAATCCCAGGTCTAGGCCAACCCTaGCCTGCGGCCGCTGTTACCACCTCAGACACTGGTCTAAGTCCA +
Preference number: 1 (lower is better)
Translates to: SHQQLSPQIPGLGQP*PAAAVTTSDTGLSP
Trigger: TGGACTTAGACCAGTGTCTGAGGTGGTAACAGCGGCCGCAGGCCAGGGTTGGCCTAGACCTGGGATTTGTGGGGAAAGCTGCTGGTGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
3UTR-3UTR CCA 90 bp ACACCAGCAGCTTTCCCCACAAATCCCAGGTCTAGGCCAACCCTGGCCTGCGGCCAAAGGCCAGCAACGTaGGCTGACACCCCTCCCCGG +
Preference number: 2 (lower is better)
Translates to: TPAAFPTNPRSRPTLACGQRPAT*ADTPPR
Trigger: CCGGGGAGGGGTGTCAGCCCACGTTGCTGGCCTTTG...GCCGCAGGCCAGGGTTGGCCTAGACCTGGGATTTGTGGGGAAAGCTGCTGGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
3UTR-3UTR CCA 90 bp GGTCTAGGCCAACCCTGGCCTGCGGCCGCTGTTACCACCTCAGACACTGGTCTATCCCCGGGGCATCTTTaGACGGGTCCTGCATCCAGC +
Preference number: 2 (lower is better)
Translates to: GLGQPWPAAAVTTSDTGLSPGHL*TGPASS
Trigger: GCTGGATGCAGGACCCGTCCAAAGATGCCCCGGGGA...TAGACCAGTGTCTGAGGTGGTAACAGCGGCCGCAGGCCAGGGTTGGCCTAGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
3UTR-3UTR TCA 90 bp CACCAGCAGCTTTCCCCACAAATCCCAGGTCTAGGCCAACCCTGGCCTGCGGCCGATCCCTACTCCTCTTaGCCCCAAAGGCCAGCAACG +
Preference number: 2 (lower is better)
Translates to: HQQLSPQIPGLGQPWPAADPYSS*PQRPAT
Trigger: CGTTGCTGGCCTTTGGGGTCAAGAGGAGTAGGGATC...GGCCGCAGGCCAGGGTTGGCCTAGACCTGGGATTTGTGGGGAAAGCTGCTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
3UTR-3UTR GCA 90 bp CACCAGCAGCTTTCCCCACAAATCCCAGGTCTAGGCCAACCCTGGCCTGCGGCCTCTTTGGACGGGTCCTaGATCCAGCAGGGATGTGGT +
Preference number: 2 (lower is better)
Translates to: HQQLSPQIPGLGQPWPAASLDGS*IQQGCG
Trigger: ACCACATCCCTGCTGGATGCAGGACCCGTCCAAAGA...GGCCGCAGGCCAGGGTTGGCCTAGACCTGGGATTTGTGGGGAAAGCTGCTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
3UTR-3UTR CCA 90 bp CTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCCAGGTCTAGGCCAACCCTCCCCGGGGCATCTTTaGACGGGTCCTGCATCCAGC +
Preference number: 2 (lower is better)
Translates to: LSWSHQQLSPQIPGLGQPSPGHL*TGPASS
Trigger: GCTGGATGCAGGACCCGTCCAAAGATGCCCCGGGGA...GGGTTGGCCTAGACCTGGGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
3UTR-3UTR CCA 90 bp ACACCAGCAGCTTTCCCCACAAATCCCAGGTCTAGGCCAACCCTGGCCTGCGGCTACCACCTCAGACACTaGTCTAAGTCCAGGGCAGCC +
Preference number: 2 (lower is better)
Translates to: TPAAFPTNPRSRPTLACGYHLRH*SKSRAA
Trigger: GGCTGCCCTGGACTTAGACCAGTGTCTGAGGTGGTA...GCCGCAGGCCAGGGTTGGCCTAGACCTGGGATTTGTGGGGAAAGCTGCTGGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
3UTR-3UTR TCA 90 bp CTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCCAGGTCTAGGCCAACCCGATCCCTACTCCTCTTaGCCCCAAAGGCCAGCAACG +
Preference number: 2 (lower is better)
Translates to: LSWSHQQLSPQIPGLGQPDPYSS*PQRPAT
Trigger: CGTTGCTGGCCTTTGGGGTCAAGAGGAGTAGGGATC...GGGTTGGCCTAGACCTGGGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
3UTR-3UTR GCA 90 bp CTCCTGGCTGGGTGCTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCCAGTCTTTGGACGGGTCCTaGATCCAGCAGGGATGTGGT +
Preference number: 2 (lower is better)
Translates to: LLAGCSAGHTSSFPHKSQSLDGS*IQQGCG
Trigger: ACCACATCCCTGCTGGATGCAGGACCCGTCCAAAGA...CTGGGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAGCACCCAGCCAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
3UTR-3UTR CCA 90 bp GTCTCCTGGCTGGGTGCTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCCCATCCAGCAGGGATGTaGTCATCTCTGTCCTCTCAG +
Preference number: 2 (lower is better)
Translates to: VSWLGAQLVTPAAFPTNPHPAGM*SSLSSQ
Trigger: CTGAGAGGACAGAGATGACCACATCCCTGCTGGATG...GGGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAGCACCCAGCCAGGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
3UTR-3UTR CCA 90 bp CTCCTGGCTGGGTGCTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCCAGCATCCAGCAGGGATGTaGTCATCTCTGTCCTCTCAG +
Preference number: 2 (lower is better)
Translates to: LLAGCSAGHTSSFPHKSQHPAGM*SSLSSQ
Trigger: CTGAGAGGACAGAGATGACCACATCCCTGCTGGATG...CTGGGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAGCACCCAGCCAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
3UTR-3UTR CCA 90 bp CTGGGTGCTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCCAGGTCTAGGTACCACCTCAGACACTaGTCTAAGTCCAGGGCAGCC +
Preference number: 2 (lower is better)
Translates to: LGAQLVTPAAFPTNPRSRYHLRH*SKSRAA
Trigger: GGCTGCCCTGGACTTAGACCAGTGTCTGAGGTGGTA...CCTAGACCTGGGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAGCACCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
3UTR-3UTR CAA 90 bp AGGCCAACCCTGGCCTGCGGCCGCTGTTACCACCTCAGACACTGGTCTAAGTCCCTCCCCGGGGCATCTTaGGACGGGTCCTGCATCCAG +
Preference number: 3 (lower is better)
Translates to: RPTLACGRCYHLRHWSKSLPGAS*DGSCIQ
Trigger: CTGGATGCAGGACCCGTCCAAAGATGCCCCGGGGAG...GGACTTAGACCAGTGTCTGAGGTGGTAACAGCGGCCGCAGGCCAGGGTTGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
3UTR-3UTR CAA 90 bp AGGTGGGCACTGGCTTTATTTGGGACCTGCTTCTGGAAGGCGCAGGGCTGCAGGCTCCCCGGGGCATCTTaGGACGGGTCCTGCATCCAG +
Preference number: 3 (lower is better)
Translates to: RWALALFGTCFWKAQGCRLPGAS*DGSCIQ
Trigger: CTGGATGCAGGACCCGTCCAAAGATGCCCCGGGGAG...CCTGCAGCCCTGCGCCTTCCAGAAGCAGGTCCCAAATAAAGCCAGTGCCCACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
3UTR GCA 72 bp GCTTTATTTGGGACCTGCTTCTGGAAGGCGCAGGGCTaGAGGTCTCCTGGCTGGGTGCTCAGCTGGTCACAC +
Preference number: 3 (lower is better)
Translates to: ALFGTCFWKAQG*RSPGWVLSWSH
Trigger: GTGTGACCAGCTGAGCACCCAGCCAGGAGACCTGCAGCCCTGCGCCTTCCAGAAGCAGGTCCCAAATAAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
3UTR CCA 72 bp CAGCTTTCCCCACAAATCCCAGGTCTAGGCCAACCCTaGCCTGCGGCCGCTGTTACCACCTCAGACACTGGT +
Preference number: 3 (lower is better)
Translates to: QLSPQIPGLGQP*PAAAVTTSDTG
Trigger: ACCAGTGTCTGAGGTGGTAACAGCGGCCGCAGGCCAGGGTTGGCCTAGACCTGGGATTTGTGGGGAAAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
3UTR GCA 72 bp TTCCCCACAAATCCCAGGTCTAGGCCAACCCTGGCCTaGGGCCGCTGTTACCACCTCAGACACTGGTCTAAG +
Preference number: 3 (lower is better)
Translates to: FPTNPRSRPTLA*GRCYHLRHWSK
Trigger: CTTAGACCAGTGTCTGAGGTGGTAACAGCGGCCGCAGGCCAGGGTTGGCCTAGACCTGGGATTTGTGGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR TCA 90 bp AGGCCAACCCTGGCCTGCGGCCGCTGTTACCACCTCAGACACTGGTCTAAGTCCCCCCCGGGGCCTCGGTaGGCTTCCTCTGCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: RPTLACGRCYHLRHWSKSPPGPR*ASSAAG
Trigger: CCCTGCTGCAGAGGAAGCTCACCGAGGCCCCGGGGG...GGACTTAGACCAGTGTCTGAGGTGGTAACAGCGGCCGCAGGCCAGGGTTGGCCT
68% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CCA 90 bp AGGCCAACCCTGGCCTGCGGCCGCTGTTACCACCTCAGACACTGGTCTAAGTCCCGGCCAGCGGCCCCATaGCGTACAGGCCCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: RPTLACGRCYHLRHWSKSRPAAP*RTGPPG
Trigger: GCCAGGAGGGCCTGTACGCCATGGGGCCGCTGGCCG...GGACTTAGACCAGTGTCTGAGGTGGTAACAGCGGCCGCAGGCCAGGGTTGGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR TCA 90 bp AGGTGGGCACTGGCTTTATTTGGGACCTGCTTCTGGAAGGCGCAGGGCTGCAGGGACCGGGAGGGGCTCTaGGCTGCTGGCGCCGAGGTG +
Preference number: 4 (lower is better)
Translates to: RWALALFGTCFWKAQGCRDREGL*AAGAEV
Trigger: CACCTCGGCGCCAGCAGCTCAGAGCCCCTCCCGGTC...CCTGCAGCCCTGCGCCTTCCAGAAGCAGGTCCCAAATAAAGCCAGTGCCCACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR TCA 90 bp CCTGGCTGGGTGCTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCCAGGTCCCCCGGGGCCTCGGTaGGCTTCCTCTGCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: PGWVLSWSHQQLSPQIPGPPGPR*ASSAAG
Trigger: CCCTGCTGCAGAGGAAGCTCACCGAGGCCCCGGGGG...ACCTGGGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAGCACCCAGCCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR TCA 90 bp GGTCTAGGCCAACCCTGGCCTGCGGCCGCTGTTACCACCTCAGACACTGGTCTAGACCGCGTCGGCCGCTaGCAGCCCCGCGCCAATGAT +
Preference number: 4 (lower is better)
Translates to: GLGQPWPAAAVTTSDTGLDRVGR*QPRAND
Trigger: ATCATTGGCGCGGGGCTGTCAGCGGCCGACGCGGTC...TAGACCAGTGTCTGAGGTGGTAACAGCGGCCGCAGGCCAGGGTTGGCCTAGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR TCA 90 bp CACCAGCAGCTTTCCCCACAAATCCCAGGTCTAGGCCAACCCTGGCCTGCGGCCGGCTGGCAGCGGACCTaGCAGGCAGTGGTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: HQQLSPQIPGLGQPWPAAGWQRT*QAVVQE
Trigger: CTCCTGCACCACTGCCTGTCAGGTCCGCTGCCAGCC...GGCCGCAGGCCAGGGTTGGCCTAGACCTGGGATTTGTGGGGAAAGCTGCTGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393306.6
CDS-3UTR GCA 90 bp CAGGTGGGCACTGGCTTTATTTGGGACCTGCTTCTGGAAGGCGCAGGGCTGCAGCCTGGGCCCCACAGCTaGTGGGATCGGGGGTCCCCC +
Preference number: 4 (lower is better)
Translates to: QVGTGFIWDLLLEGAGLQPGPHS*WDRGSP
Trigger: GGGGGACCCCCGATCCCAGCAGCTGTGGGGCCCAGG...CTGCAGCCCTGCGCCTTCCAGAAGCAGGTCCCAAATAAAGCCAGTGCCCACCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR GCA 90 bp TCACACCAGCAGCTTTCCCCACAAATCCCAGGTCTAGGCCAACCCTGGCCTGCGCCTGGGCCCCACAGCTaGTGGGATCGGGGGTCCCCC +
Preference number: 4 (lower is better)
Translates to: SHQQLSPQIPGLGQPWPAPGPHS*WDRGSP
Trigger: GGGGGACCCCCGATCCCAGCAGCTGTGGGGCCCAGG...CGCAGGCCAGGGTTGGCCTAGACCTGGGATTTGTGGGGAAAGCTGCTGGTGTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CCA 90 bp TTTCTGGGTTCACAGGCCCAACCTTCCGTGTCCCCCAAGGCGTTCCGGGGCGGCGGGGCTCTGAGCTGCTaGCGCCGAGGTGGTCCTTTC +
Preference number: 4 (lower is better)
Translates to: FLGSQAQPSVSPKAFRGGGALSC*RRGGPF
Trigger: GAAAGGACCACCTCGGCGCCAGCAGCTCAGAGCCCC...GCCGCCCCGGAACGCCTTGGGGGACACGGAAGGTTGGGCCTGTGAACCCAGAAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000565123.5
CDS-3UTR CCA 90 bp ACACCAGCAGCTTTCCCCACAAATCCCAGGTCTAGGCCAACCCTGGCCTGCGGCGGTCCTGGTCCAGGATaGAGACCCCCGGGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: TPAAFPTNPRSRPTLACGGPGPG*RPPGPR
Trigger: CCGAGGCCCCGGGGGTCTCCATCCTGGACCAGGACC...GCCGCAGGCCAGGGTTGGCCTAGACCTGGGATTTGTGGGGAAAGCTGCTGGTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CCA 90 bp CCCACAAATCCCAGGTCTAGGCCAACCCTGGCCTGCGGCCGCTGTTACCACCTCCCGCACCCACCCTTGTaGCGGCCTCCAGGGCAGACA +
Preference number: 4 (lower is better)
Translates to: PTNPRSRPTLACGRCYHLPHPPL*RPPGQT
Trigger: TGTCTGCCCTGGAGGCCGCCACAAGGGTGGGTGCGG...GAGGTGGTAACAGCGGCCGCAGGCCAGGGTTGGCCTAGACCTGGGATTTGTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CCA 90 bp AGGTGGGCACTGGCTTTATTTGGGACCTGCTTCTGGAAGGCGCAGGGCTGCAGGCGGCCAGCGGCCCCATaGCGTACAGGCCCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: RWALALFGTCFWKAQGCRRPAAP*RTGPPG
Trigger: GCCAGGAGGGCCTGTACGCCATGGGGCCGCTGGCCG...CCTGCAGCCCTGCGCCTTCCAGAAGCAGGTCCCAAATAAAGCCAGTGCCCACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR TCA 90 bp CACCTTGGGCACATGTCATTAGGACTTCCTGAGGCTGTCACGGGCGCGTCCTCACCCCCGGGGCCTCGGTaGGCTTCCTCTGCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: HLGHMSLGLPEAVTGASSPPGPR*ASSAAG
Trigger: CCCTGCTGCAGAGGAAGCTCACCGAGGCCCCGGGGG...TGAGGACGCGCCCGTGACAGCCTCAGGAAGTCCTAATGACATGTGCCCAAGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565123.5
CDS-3UTR TCA 90 bp GGTCTCCTGGCTGGGTGCTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCGACCGCGTCGGCCGCTaGCAGCCCCGCGCCAATGAT +
Preference number: 4 (lower is better)
Translates to: GLLAGCSAGHTSSFPHKSDRVGR*QPRAND
Trigger: ATCATTGGCGCGGGGCTGTCAGCGGCCGACGCGGTC...GGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAGCACCCAGCCAGGAGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR TCA 90 bp AGGCCAACCCTGGCCTGCGGCCGCTGTTACCACCTCAGACACTGGTCTAAGTCCCGGGGTGGGAGCCGATaGGGACCAGCACCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: RPTLACGRCYHLRHWSKSRGGSR*GPAPGR
Trigger: TCTCCCTGGTGCTGGTCCTCATCGGCTCCCACCCCG...GGACTTAGACCAGTGTCTGAGGTGGTAACAGCGGCCGCAGGCCAGGGTTGGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR GCA 90 bp GGTCTAGGCCAACCCTGGCCTGCGGCCGCTGTTACCACCTCAGACACTGGTCTAGGAGGGGCTCTGAGCTaGTGGCGCCGAGGTGGTCCT +
Preference number: 4 (lower is better)
Translates to: GLGQPWPAAAVTTSDTGLGGALS*WRRGGP
Trigger: AGGACCACCTCGGCGCCAGCAGCTCAGAGCCCCTCC...TAGACCAGTGTCTGAGGTGGTAACAGCGGCCGCAGGCCAGGGTTGGCCTAGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR GCA 90 bp CCCACAAATCCCAGGTCTAGGCCAACCCTGGCCTGCGGCCGCTGTTACCACCTCTGGAAGGCGCAGGGCTaGAGGTCTCCTGGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: PTNPRSRPTLACGRCYHLWKAQG*RSPGWV
Trigger: CACCCAGCCAGGAGACCTGCAGCCCTGCGCCTTCCA...GAGGTGGTAACAGCGGCCGCAGGCCAGGGTTGGCCTAGACCTGGGATTTGTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CCA 90 bp TTTCTGGGTTCACAGGCCCAACCTTCCGTGTCCCCCAAGGCGTTCCGGGGCGGCGAACCACGTGGGGGATaGCGTGCTCCTTCCGGTGCT +
Preference number: 4 (lower is better)
Translates to: FLGSQAQPSVSPKAFRGGEPRGG*RAPSGA
Trigger: AGCACCGGAAGGAGCACGCCATCCCCCACGTGGTTC...GCCGCCCCGGAACGCCTTGGGGGACACGGAAGGTTGGGCCTGTGAACCCAGAAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000565123.5
CDS-3UTR CCA 90 bp CACCAGCAGCTTTCCCCACAAATCCCAGGTCTAGGCCAACCCTGGCCTGCGGCCCGGCCCAGAACCACGTaGGGGATGGCGTGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: HQQLSPQIPGLGQPWPAARPRTT*GMACSF
Trigger: GAAGGAGCACGCCATCCCCCACGTGGTTCTGGGCCG...GGCCGCAGGCCAGGGTTGGCCTAGACCTGGGATTTGTGGGGAAAGCTGCTGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR TCA 90 bp CTCCTGGCTGGGTGCTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCCAGCGGGGTGGGAGCCGATaGGGACCAGCACCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: LLAGCSAGHTSSFPHKSQRGGSR*GPAPGR
Trigger: TCTCCCTGGTGCTGGTCCTCATCGGCTCCCACCCCG...CTGGGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAGCACCCAGCCAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR GCA 90 bp CCCACAAATCCCAGGTCTAGGCCAACCCTGGCCTGCGGCCGCTGTTACCACCTCGCCTTCCTCCAAACCTaGCCTGCCCCTGCTGACCCT +
Preference number: 4 (lower is better)
Translates to: PTNPRSRPTLACGRCYHLAFLQT*PAPADP
Trigger: AGGGTCAGCAGGGGCAGGGCAGGTTTGGAGGAAGGC...GAGGTGGTAACAGCGGCCGCAGGCCAGGGTTGGCCTAGACCTGGGATTTGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361711.7
CDS-3UTR GCA 90 bp AGGCCAACCCTGGCCTGCGGCCGCTGTTACCACCTCAGACACTGGTCTAAGTCCTGGAAGGCGCAGGGCTaGAGGTCTCCTGGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: RPTLACGRCYHLRHWSKSWKAQG*RSPGWV
Trigger: CACCCAGCCAGGAGACCTGCAGCCCTGCGCCTTCCA...GGACTTAGACCAGTGTCTGAGGTGGTAACAGCGGCCGCAGGCCAGGGTTGGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CCA 90 bp GGTCTCCTGGCTGGGTGCTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCGGAGCTCATGGCTGGTaGGGGGCTTGGGGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: GLLAGCSAGHTSSFPHKSGAHGW*GAWGWQ
Trigger: CTGCCAGCCCCAAGCCCCCCACCAGCCATGAGCTCC...GGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAGCACCCAGCCAGGAGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CCA 90 bp GGTCTAGGCCAACCCTGGCCTGCGGCCGCTGTTACCACCTCAGACACTGGTCTAGGGGCTCTGAGCTGCTaGCGCCGAGGTGGTCCTTTC +
Preference number: 4 (lower is better)
Translates to: GLGQPWPAAAVTTSDTGLGALSC*RRGGPF
Trigger: GAAAGGACCACCTCGGCGCCAGCAGCTCAGAGCCCC...TAGACCAGTGTCTGAGGTGGTAACAGCGGCCGCAGGCCAGGGTTGGCCTAGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CCA 90 bp GCTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCCAGGTCTAGGCCAACCGGTCCTGGTCCAGGATaGAGACCCCCGGGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: AQLVTPAAFPTNPRSRPTGPGPG*RPPGPR
Trigger: CCGAGGCCCCGGGGGTCTCCATCCTGGACCAGGACC...GGTTGGCCTAGACCTGGGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CCA 90 bp ACACCAGCAGCTTTCCCCACAAATCCCAGGTCTAGGCCAACCCTGGCCTGCGGCGGTCTAGGCCAACCCTaGCCTGCGGCCGCTGTTACC +
Preference number: 4 (lower is better)
Translates to: TPAAFPTNPRSRPTLACGGLGQP*PAAAVT
Trigger: GGTAACAGCGGCCGCAGGCCAGGGTTGGCCTAGACC...GCCGCAGGCCAGGGTTGGCCTAGACCTGGGATTTGTGGGGAAAGCTGCTGGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR TCA 90 bp ACACCAGCAGCTTTCCCCACAAATCCCAGGTCTAGGCCAACCCTGGCCTGCGGCTCTGCATCCAGTCCTTaGCCTCCAGGTCCGGGAGCC +
Preference number: 4 (lower is better)
Translates to: TPAAFPTNPRSRPTLACGSASSP*PPGPGA
Trigger: GGCTCCCGGACCTGGAGGTCAAGGACTGGATGCAGA...GCCGCAGGCCAGGGTTGGCCTAGACCTGGGATTTGTGGGGAAAGCTGCTGGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR TCA 90 bp TCACACCAGCAGCTTTCCCCACAAATCCCAGGTCTAGGCCAACCCTGGCCTGCGACAGCTCATGGTGGATaGAGGGCAGGGCCTCCCCGG +
Preference number: 4 (lower is better)
Translates to: SHQQLSPQIPGLGQPWPATAHGG*RAGPPR
Trigger: CCGGGGAGGCCCTGCCCTTCATCCACCATGAGCTGT...CGCAGGCCAGGGTTGGCCTAGACCTGGGATTTGTGGGGAAAGCTGCTGGTGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR TCA 90 bp AGGTGGGCACTGGCTTTATTTGGGACCTGCTTCTGGAAGGCGCAGGGCTGCAGGACAGCTCATGGTGGATaGAGGGCAGGGCCTCCCCGG +
Preference number: 4 (lower is better)
Translates to: RWALALFGTCFWKAQGCRTAHGG*RAGPPR
Trigger: CCGGGGAGGCCCTGCCCTTCATCCACCATGAGCTGT...CCTGCAGCCCTGCGCCTTCCAGAAGCAGGTCCCAAATAAAGCCAGTGCCCACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR TCA 90 bp CACCAGCAGCTTTCCCCACAAATCCCAGGTCTAGGCCAACCCTGGCCTGCGGCCGGGTGCTCTGGTAGGTaGAGGGGTCCACGTCAATGG +
Preference number: 4 (lower is better)
Translates to: HQQLSPQIPGLGQPWPAAGCSGR*RGPRQW
Trigger: CCATTGACGTGGACCCCTTCACCTACCAGAGCACCC...GGCCGCAGGCCAGGGTTGGCCTAGACCTGGGATTTGTGGGGAAAGCTGCTGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR TCA 90 bp AGGTGGGCACTGGCTTTATTTGGGACCTGCTTCTGGAAGGCGCAGGGCTGCAGGGGTGCAGGAGCCCAGTaGGCCCGGCCAAGTTGTGCA +
Preference number: 4 (lower is better)
Translates to: RWALALFGTCFWKAQGCRGAGAQ*ARPSCA
Trigger: TGCACAACTTGGCCGGGCTCACTGGGCTCCTGCACC...CCTGCAGCCCTGCGCCTTCCAGAAGCAGGTCCCAAATAAAGCCAGTGCCCACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393306.6
CDS-3UTR GCA 90 bp CTGGGTGCTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCCAGGTCTAGGGGAGGGGCTCTGAGCTaGTGGCGCCGAGGTGGTCCT +
Preference number: 4 (lower is better)
Translates to: LGAQLVTPAAFPTNPRSRGGALS*WRRGGP
Trigger: AGGACCACCTCGGCGCCAGCAGCTCAGAGCCCCTCC...CCTAGACCTGGGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAGCACCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR GCA 90 bp TCAGATTTTCTGGGTTCACAGGCCCAACCTTCCGTGTCCCCCAAGGCGTTCCGGGGAGGGGCTCTGAGCTaGTGGCGCCGAGGTGGTCCT +
Preference number: 4 (lower is better)
Translates to: SDFLGSQAQPSVSPKAFRGGALS*WRRGGP
Trigger: AGGACCACCTCGGCGCCAGCAGCTCAGAGCCCCTCC...CCGGAACGCCTTGGGGGACACGGAAGGTTGGGCCTGTGAACCCAGAAAATCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000565123.5
CDS-3UTR GCA 90 bp ACACCAGCAGCTTTCCCCACAAATCCCAGGTCTAGGCCAACCCTGGCCTGCGGCGCGTGCTCCTTCCGGTaGTTCCAGGTGAGGACCGAC +
Preference number: 4 (lower is better)
Translates to: TPAAFPTNPRSRPTLACGACSFR*FQVRTD
Trigger: GTCGGTCCTCACCTGGAAGCACCGGAAGGAGCACGC...GCCGCAGGCCAGGGTTGGCCTAGACCTGGGATTTGTGGGGAAAGCTGCTGGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR GCA 90 bp AGGTCTAGGCCAACCCTGGCCTGCGGCCGCTGTTACCACCTCAGACACTGGTCTACGTGGGGGATGGCGTaGTCCTTCCGGTGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: RSRPTLACGRCYHLRHWSTWGMA*SFRCFQ
Trigger: CTGGAAGCACCGGAAGGAGCACGCCATCCCCCACGT...AGACCAGTGTCTGAGGTGGTAACAGCGGCCGCAGGCCAGGGTTGGCCTAGACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR GCA 90 bp AGGTGGGCACTGGCTTTATTTGGGACCTGCTTCTGGAAGGCGCAGGGCTGCAGGCCGGGCTGTCGAACGTaGCTGTGGCGAGGACCACGT +
Preference number: 4 (lower is better)
Translates to: RWALALFGTCFWKAQGCRPGCRT*LWRGPR
Trigger: ACGTGGTCCTCGCCACAGGCACGTTCGACAGCCCGG...CCTGCAGCCCTGCGCCTTCCAGAAGCAGGTCCCAAATAAAGCCAGTGCCCACCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR GCA 90 bp AGGTGGGCACTGGCTTTATTTGGGACCTGCTTCTGGAAGGCGCAGGGCTGCAGGAGGCCAACCCTGGCCTaGGGCCGCTGTTACCACCTC +
Preference number: 4 (lower is better)
Translates to: RWALALFGTCFWKAQGCRRPTLA*GRCYHL
Trigger: GAGGTGGTAACAGCGGCCGCAGGCCAGGGTTGGCCT...CCTGCAGCCCTGCGCCTTCCAGAAGCAGGTCCCAAATAAAGCCAGTGCCCACCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR GCA 90 bp TCACACCAGCAGCTTTCCCCACAAATCCCAGGTCTAGGCCAACCCTGGCCTGCGAGGCCAACCCTGGCCTaGGGCCGCTGTTACCACCTC +
Preference number: 4 (lower is better)
Translates to: SHQQLSPQIPGLGQPWPARPTLA*GRCYHL
Trigger: GAGGTGGTAACAGCGGCCGCAGGCCAGGGTTGGCCT...CGCAGGCCAGGGTTGGCCTAGACCTGGGATTTGTGGGGAAAGCTGCTGGTGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CCA 90 bp TTTCTGGGTTCACAGGCCCAACCTTCCGTGTCCCCCAAGGCGTTCCGGGGCGGCCGAGGTGGTCCTTTCTaGAGGAGCTCATGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: FLGSQAQPSVSPKAFRGGRGGPF*RSSWLV
Trigger: CACCAGCCATGAGCTCCTCCAGAAAGGACCACCTCG...GCCGCCCCGGAACGCCTTGGGGGACACGGAAGGTTGGGCCTGTGAACCCAGAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565123.5
CDS-3UTR CCA 90 bp AGGCCAACCCTGGCCTGCGGCCGCTGTTACCACCTCAGACACTGGTCTAAGTCCCTGCTGGCGCCGAGGTaGTCCTTTCTGGAGGAGCTC +
Preference number: 4 (lower is better)
Translates to: RPTLACGRCYHLRHWSKSLLAPR*SFLEEL
Trigger: GAGCTCCTCCAGAAAGGACCACCTCGGCGCCAGCAG...GGACTTAGACCAGTGTCTGAGGTGGTAACAGCGGCCGCAGGCCAGGGTTGGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CCA 90 bp AGGTGGGCACTGGCTTTATTTGGGACCTGCTTCTGGAAGGCGCAGGGCTGCAGGGGGGCTCTGAGCTGCTaGCGCCGAGGTGGTCCTTTC +
Preference number: 4 (lower is better)
Translates to: RWALALFGTCFWKAQGCRGALSC*RRGGPF
Trigger: GAAAGGACCACCTCGGCGCCAGCAGCTCAGAGCCCC...CCTGCAGCCCTGCGCCTTCCAGAAGCAGGTCCCAAATAAAGCCAGTGCCCACCT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CCA 90 bp CACCAGCAGCTTTCCCCACAAATCCCAGGTCTAGGCCAACCCTGGCCTGCGGCCAGCAGGGGGTGTGGGTaGATGGCATCTGGCTTCGTG +
Preference number: 4 (lower is better)
Translates to: HQQLSPQIPGLGQPWPAASRGCG*MASGFV
Trigger: CACGAAGCCAGATGCCATCCACCCACACCCCCTGCT...GGCCGCAGGCCAGGGTTGGCCTAGACCTGGGATTTGTGGGGAAAGCTGCTGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CCA 90 bp CCCACAAATCCCAGGTCTAGGCCAACCCTGGCCTGCGGCCGCTGTTACCACCTCCTGCAGCAGGGGGTGTaGGTGGATGGCATCTGGCTT +
Preference number: 4 (lower is better)
Translates to: PTNPRSRPTLACGRCYHLLQQGV*VDGIWL
Trigger: AAGCCAGATGCCATCCACCCACACCCCCTGCTGCAG...GAGGTGGTAACAGCGGCCGCAGGCCAGGGTTGGCCTAGACCTGGGATTTGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CCA 90 bp GGTCTCCTGGCTGGGTGCTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCAGGGCCACGGGGCTTTaGGATCGGCCTTCGAGGCCT +
Preference number: 4 (lower is better)
Translates to: GLLAGCSAGHTSSFPHKSRATGL*DRPSRP
Trigger: AGGCCTCGAAGGCCGATCCCAAAGCCCCGTGGCCCT...GGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAGCACCCAGCCAGGAGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CCA 90 bp GTCTCCTGGCTGGGTGCTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCCAGGGCCACGGGGCTTTaGGATCGGCCTTCGAGGCCT +
Preference number: 4 (lower is better)
Translates to: VSWLGAQLVTPAAFPTNPRATGL*DRPSRP
Trigger: AGGCCTCGAAGGCCGATCCCAAAGCCCCGTGGCCCT...GGGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAGCACCCAGCCAGGAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CCA 90 bp GTCTCCTGGCTGGGTGCTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCCCGATGTCCCCGGCAGTaGCCCGGCTGTTGCGAAGAC +
Preference number: 4 (lower is better)
Translates to: VSWLGAQLVTPAAFPTNPRCPRQ*PGCCED
Trigger: GTCTTCGCAACAGCCGGGCCACTGCCGGGGACATCG...GGGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAGCACCCAGCCAGGAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CCA 90 bp GGTCTAGGCCAACCCTGGCCTGCGGCCGCTGTTACCACCTCAGACACTGGTCTAGCTGGGCCTGGTTCCTaGTCAGGAAGCCGCTCACCT +
Preference number: 4 (lower is better)
Translates to: GLGQPWPAAAVTTSDTGLAGPGS*SGSRSP
Trigger: AGGTGAGCGGCTTCCTGACCAGGAACCAGGCCCAGC...TAGACCAGTGTCTGAGGTGGTAACAGCGGCCGCAGGCCAGGGTTGGCCTAGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CCA 90 bp AGGTCTAGGCCAACCCTGGCCTGCGGCCGCTGTTACCACCTCAGACACTGGTCTAGCGAGAAGGGCTGCTaGGCCTGGTTCCTGGTCAGG +
Preference number: 4 (lower is better)
Translates to: RSRPTLACGRCYHLRHWSSEKGC*AWFLVR
Trigger: CCTGACCAGGAACCAGGCCCAGCAGCCCTTCTCGCT...AGACCAGTGTCTGAGGTGGTAACAGCGGCCGCAGGCCAGGGTTGGCCTAGACCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CCA 90 bp CCCACAAATCCCAGGTCTAGGCCAACCCTGGCCTGCGGCCGCTGTTACCACCTCGCAGACAGCTCATGGTaGATGAAGGGCAGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: PTNPRSRPTLACGRCYHLADSSW*MKGRAS
Trigger: GGAGGCCCTGCCCTTCATCCACCATGAGCTGTCTGC...GAGGTGGTAACAGCGGCCGCAGGCCAGGGTTGGCCTAGACCTGGGATTTGTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CCA 90 bp CTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCCAGGTCTAGGCCAACCCCCGCACCCACCCTTGTaGCGGCCTCCAGGGCAGACA +
Preference number: 4 (lower is better)
Translates to: LSWSHQQLSPQIPGLGQPPHPPL*RPPGQT
Trigger: TGTCTGCCCTGGAGGCCGCCACAAGGGTGGGTGCGG...GGGTTGGCCTAGACCTGGGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CCA 90 bp CACCAGCAGCTTTCCCCACAAATCCCAGGTCTAGGCCAACCCTGGCCTGCGGCCACACCCTCGAGGTCCTaGAACACGGCCTGGCAGTCT +
Preference number: 4 (lower is better)
Translates to: HQQLSPQIPGLGQPWPAATPSRS*NTAWQS
Trigger: AGACTGCCAGGCCGTGTTCCAGGACCTCGAGGGTGT...GGCCGCAGGCCAGGGTTGGCCTAGACCTGGGATTTGTGGGGAAAGCTGCTGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CCA 90 bp CCCACAAATCCCAGGTCTAGGCCAACCCTGGCCTGCGGCCGCTGTTACCACCTCCAATGGGGTTCCTCTTaGCGCTCAGCGGCTGGTCAG +
Preference number: 4 (lower is better)
Translates to: PTNPRSRPTLACGRCYHLQWGSS*RSAAGQ
Trigger: CTGACCAGCCGCTGAGCGCCAAGAGGAACCCCATTG...GAGGTGGTAACAGCGGCCGCAGGCCAGGGTTGGCCTAGACCTGGGATTTGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CCA 90 bp CTCCTGGCTGGGTGCTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCCAGTCCTTAGCAGGGAGCTaGCCACAGCCAAGGCGCCCC +
Preference number: 4 (lower is better)
Translates to: LLAGCSAGHTSSFPHKSQSLAGS*PQPRRP
Trigger: GGGGCGCCTTGGCTGTGGCCAGCTCCCTGCTAAGGA...CTGGGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAGCACCCAGCCAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CCA 90 bp AGGTGGGCACTGGCTTTATTTGGGACCTGCTTCTGGAAGGCGCAGGGCTGCAGGTCCTTAGCAGGGAGCTaGCCACAGCCAAGGCGCCCC +
Preference number: 4 (lower is better)
Translates to: RWALALFGTCFWKAQGCRSLAGS*PQPRRP
Trigger: GGGGCGCCTTGGCTGTGGCCAGCTCCCTGCTAAGGA...CCTGCAGCCCTGCGCCTTCCAGAAGCAGGTCCCAAATAAAGCCAGTGCCCACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CCA 90 bp GTCTCCTGGCTGGGTGCTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCCGGGAGCCAGCGGGTCTaGCCGAGTGTTAGGGTGGCT +
Preference number: 4 (lower is better)
Translates to: VSWLGAQLVTPAAFPTNPGSQRV*PSVRVA
Trigger: AGCCACCCTAACACTCGGCCAGACCCGCTGGCTCCC...GGGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAGCACCCAGCCAGGAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CCA 90 bp CCTGGCTGGGTGCTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCCAGGTCAAAGGCCAGCAACGTaGGCTGACACCCCTCCCCGG +
Preference number: 4 (lower is better)
Translates to: PGWVLSWSHQQLSPQIPGQRPAT*ADTPPR
Trigger: CCGGGGAGGGGTGTCAGCCCACGTTGCTGGCCTTTG...ACCTGGGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAGCACCCAGCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CCA 90 bp CACCAGCAGCTTTCCCCACAAATCCCAGGTCTAGGCCAACCCTGGCCTGCGGCCTGCAGGTCTCCTGGCTaGGTGCTCAGCTGGTCACAC +
Preference number: 4 (lower is better)
Translates to: HQQLSPQIPGLGQPWPAACRSPG*VLSWSH
Trigger: GTGTGACCAGCTGAGCACCCAGCCAGGAGACCTGCA...GGCCGCAGGCCAGGGTTGGCCTAGACCTGGGATTTGTGGGGAAAGCTGCTGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CCA 90 bp CCCACAAATCCCAGGTCTAGGCCAACCCTGGCCTGCGGCCGCTGTTACCACCTCTTTGGGACCTGCTTCTaGAAGGCGCAGGGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: PTNPRSRPTLACGRCYHLFGTCF*KAQGCR
Trigger: CCTGCAGCCCTGCGCCTTCCAGAAGCAGGTCCCAAA...GAGGTGGTAACAGCGGCCGCAGGCCAGGGTTGGCCTAGACCTGGGATTTGTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR TCA 90 bp CAGGTGGGCACTGGCTTTATTTGGGACCTGCTTCTGGAAGGCGCAGGGCTGCAGTCTGCATCCAGTCCTTaGCCTCCAGGTCCGGGAGCC +
Preference number: 4 (lower is better)
Translates to: QVGTGFIWDLLLEGAGLQSASSP*PPGPGA
Trigger: GGCTCCCGGACCTGGAGGTCAAGGACTGGATGCAGA...CTGCAGCCCTGCGCCTTCCAGAAGCAGGTCCCAAATAAAGCCAGTGCCCACCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR TCA 90 bp AGGCCAACCCTGGCCTGCGGCCGCTGTTACCACCTCAGACACTGGTCTAAGTCCCCCACTCCACGGCTGTaGCTACAGCACCGGACACAA +
Preference number: 4 (lower is better)
Translates to: RPTLACGRCYHLRHWSKSPTPRL*LQHRTQ
Trigger: TTGTGTCCGGTGCTGTAGTCACAGCCGTGGAGTGGG...GGACTTAGACCAGTGTCTGAGGTGGTAACAGCGGCCGCAGGCCAGGGTTGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR GCA 90 bp CCTGGCTGGGTGCTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCCAGGTTCGGTGAGCTTCCTCTaGAGCAGGGGGTGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: PGWVLSWSHQQLSPQIPGSVSFL*SRGCGW
Trigger: CCACCCACACCCCCTGCTGCAGAGGAAGCTCACCGA...ACCTGGGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAGCACCCAGCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR GCA 90 bp GTCTCCTGGCTGGGTGCTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCCTCGGTGAGCTTCCTCTaGAGCAGGGGGTGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: VSWLGAQLVTPAAFPTNPSVSFL*SRGCGW
Trigger: CCACCCACACCCCCTGCTGCAGAGGAAGCTCACCGA...GGGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAGCACCCAGCCAGGAGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR GCA 90 bp CCTGGCTGGGTGCTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCCAGGTACGTGGGGGATGGCGTaGTCCTTCCGGTGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: PGWVLSWSHQQLSPQIPGTWGMA*SFRCFQ
Trigger: CTGGAAGCACCGGAAGGAGCACGCCATCCCCCACGT...ACCTGGGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAGCACCCAGCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR GCA 90 bp AGGTGGGCACTGGCTTTATTTGGGACCTGCTTCTGGAAGGCGCAGGGCTGCAGGCACAGCGAGAAGGGCTaGTGGGCCTGGTTCCTGGTC +
Preference number: 4 (lower is better)
Translates to: RWALALFGTCFWKAQGCRHSEKG*WAWFLV
Trigger: GACCAGGAACCAGGCCCAGCAGCCCTTCTCGCTGTG...CCTGCAGCCCTGCGCCTTCCAGAAGCAGGTCCCAAATAAAGCCAGTGCCCACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR GCA 90 bp CTCCTGGCTGGGTGCTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCCAGCACAGCGAGAAGGGCTaGTGGGCCTGGTTCCTGGTC +
Preference number: 4 (lower is better)
Translates to: LLAGCSAGHTSSFPHKSQHSEKG*WAWFLV
Trigger: GACCAGGAACCAGGCCCAGCAGCCCTTCTCGCTGTG...CTGGGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAGCACCCAGCCAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR GCA 90 bp CTGGGTGCTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCCAGGTCTAGGCCGGGCTGTCGAACGTaGCTGTGGCGAGGACCACGT +
Preference number: 4 (lower is better)
Translates to: LGAQLVTPAAFPTNPRSRPGCRT*LWRGPR
Trigger: ACGTGGTCCTCGCCACAGGCACGTTCGACAGCCCGG...CCTAGACCTGGGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAGCACCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR GCA 90 bp AGGCCAACCCTGGCCTGCGGCCGCTGTTACCACCTCAGACACTGGTCTAAGTCCGGCGACAGGATGGACTaGTCCCGCATCATCTGGTGC +
Preference number: 4 (lower is better)
Translates to: RPTLACGRCYHLRHWSKSGDRMD*SRIIWC
Trigger: GCACCAGATGATGCGGGAGCAGTCCATCCTGTCGCC...GGACTTAGACCAGTGTCTGAGGTGGTAACAGCGGCCGCAGGCCAGGGTTGGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR GCA 90 bp GTCTCCTGGCTGGGTGCTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCCGGTCTCCTGGCTGGGTaGTCAGCTGGTCACACCAGC +
Preference number: 4 (lower is better)
Translates to: VSWLGAQLVTPAAFPTNPGLLAG*SAGHTS
Trigger: GCTGGTGTGACCAGCTGAGCACCCAGCCAGGAGACC...GGGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAGCACCCAGCCAGGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR GCA 90 bp AGGTCTAGGCCAACCCTGGCCTGCGGCCGCTGTTACCACCTCAGACACTGGTCTAGCCCGGCCAAGTTGTaGACTAGGAGGGTCAGGGGA +
Preference number: 4 (lower is better)
Translates to: RSRPTLACGRCYHLRHWSSPAKL*TRRVRG
Trigger: TCCCCTGACCCTCCTAGTGCACAACTTGGCCGGGCT...AGACCAGTGTCTGAGGTGGTAACAGCGGCCGCAGGCCAGGGTTGGCCTAGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393306.6
CDS-3UTR CCA 90 bp CCTGGCTGGGTGCTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCCAGGTCTCCTGGGCTTGGCCTaGCCTTCCTCCAAACCTGCC +
Preference number: 4 (lower is better)
Translates to: PGWVLSWSHQQLSPQIPGLLGLA*PSSKPA
Trigger: GGCAGGTTTGGAGGAAGGCCAGGCCAAGCCCAGGAG...ACCTGGGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAGCACCCAGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361711.7
CDS-3UTR CCA 90 bp GGTCTCCTGGCTGGGTGCTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCGAACCACGTGGGGGATaGCGTGCTCCTTCCGGTGCT +
Preference number: 4 (lower is better)
Translates to: GLLAGCSAGHTSSFPHKSEPRGG*RAPSGA
Trigger: AGCACCGGAAGGAGCACGCCATCCCCCACGTGGTTC...GGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAGCACCCAGCCAGGAGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CCA 90 bp CTGGGTGCTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCCAGGTCTAGGCGGCCCAGAACCACGTaGGGGATGGCGTGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: LGAQLVTPAAFPTNPRSRRPRTT*GMACSF
Trigger: GAAGGAGCACGCCATCCCCCACGTGGTTCTGGGCCG...CCTAGACCTGGGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAGCACCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CCA 90 bp GATCACCTTGGGCACATGTCATTAGGACTTCCTGAGGCTGTCACGGGCGCGTCCCGGCCCAGAACCACGTaGGGGATGGCGTGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: DHLGHMSLGLPEAVTGASRPRTT*GMACSF
Trigger: GAAGGAGCACGCCATCCCCCACGTGGTTCTGGGCCG...GGACGCGCCCGTGACAGCCTCAGGAAGTCCTAATGACATGTGCCCAAGGTGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565123.5
CDS-3UTR CCA 90 bp CCTGGCTGGGTGCTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCCAGGTGGGAGCCCCATCCACTaGCCTTGGCTCAGGATCACC +
Preference number: 4 (lower is better)
Translates to: PGWVLSWSHQQLSPQIPGGSPIH*PWLRIT
Trigger: GGTGATCCTGAGCCAAGGCCAGTGGATGGGGCTCCC...ACCTGGGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAGCACCCAGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CCA 90 bp CCTGGCTGGGTGCTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCCAGGTGCTGGGCCTGGTTCCTaGTCAGGAAGCCGCTCACCT +
Preference number: 4 (lower is better)
Translates to: PGWVLSWSHQQLSPQIPGAGPGS*SGSRSP
Trigger: AGGTGAGCGGCTTCCTGACCAGGAACCAGGCCCAGC...ACCTGGGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAGCACCCAGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CCA 90 bp CAGGTGGGCACTGGCTTTATTTGGGACCTGCTTCTGGAAGGCGCAGGGCTGCAGAGCGAGAAGGGCTGCTaGGCCTGGTTCCTGGTCAGG +
Preference number: 4 (lower is better)
Translates to: QVGTGFIWDLLLEGAGLQSEKGC*AWFLVR
Trigger: CCTGACCAGGAACCAGGCCCAGCAGCCCTTCTCGCT...CTGCAGCCCTGCGCCTTCCAGAAGCAGGTCCCAAATAAAGCCAGTGCCCACCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CCA 90 bp CAGGTGGGCACTGGCTTTATTTGGGACCTGCTTCTGGAAGGCGCAGGGCTGCAGTGTCGAACGTGCCTGTaGCGAGGACCACGTTGCGGG +
Preference number: 4 (lower is better)
Translates to: QVGTGFIWDLLLEGAGLQCRTCL*RGPRCG
Trigger: CCCGCAACGTGGTCCTCGCCACAGGCACGTTCGACA...CTGCAGCCCTGCGCCTTCCAGAAGCAGGTCCCAAATAAAGCCAGTGCCCACCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CCA 90 bp AGGTCTAGGCCAACCCTGGCCTGCGGCCGCTGTTACCACCTCAGACACTGGTCTGGCTGGGCGACAGGATaGACTGCTCCCGCATCATCT +
Preference number: 4 (lower is better)
Translates to: RSRPTLACGRCYHLRHWSGWATG*TAPASS
Trigger: AGATGATGCGGGAGCAGTCCATCCTGTCGCCCAGCC...AGACCAGTGTCTGAGGTGGTAACAGCGGCCGCAGGCCAGGGTTGGCCTAGACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CCA 90 bp AGGTGGGCACTGGCTTTATTTGGGACCTGCTTCTGGAAGGCGCAGGGCTGCAGGAAGGAGAGGTCGGGGTaGGAGCCGATGAGGACCAGC +
Preference number: 4 (lower is better)
Translates to: RWALALFGTCFWKAQGCRKERSG*EPMRTS
Trigger: GCTGGTCCTCATCGGCTCCCACCCCGACCTCTCCTT...CCTGCAGCCCTGCGCCTTCCAGAAGCAGGTCCCAAATAAAGCCAGTGCCCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CCA 90 bp GTCTCCTGGCTGGGTGCTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCCAAGGAGAGGTCGGGGTaGGAGCCGATGAGGACCAGC +
Preference number: 4 (lower is better)
Translates to: VSWLGAQLVTPAAFPTNPKERSG*EPMRTS
Trigger: GCTGGTCCTCATCGGCTCCCACCCCGACCTCTCCTT...GGGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAGCACCCAGCCAGGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CCA 90 bp CACCAGCAGCTTTCCCCACAAATCCCAGGTCTAGGCCAACCCTGGCCTGCGGCCGGCCGAGTGTTAGGGTaGCTTCCTGGTCTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: HQQLSPQIPGLGQPWPAAGRVLG*LPGLLP
Trigger: AGGAAGGAGACCAGGAAGCCACCCTAACACTCGGCC...GGCCGCAGGCCAGGGTTGGCCTAGACCTGGGATTTGTGGGGAAAGCTGCTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CCA 90 bp CTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCCAGGTCTAGGCCAACCCGGGAGCCAGCGGGTCTaGCCGAGTGTTAGGGTGGCT +
Preference number: 4 (lower is better)
Translates to: LSWSHQQLSPQIPGLGQPGSQRV*PSVRVA
Trigger: AGCCACCCTAACACTCGGCCAGACCCGCTGGCTCCC...GGGTTGGCCTAGACCTGGGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CCA 90 bp AGGTGGGCACTGGCTTTATTTGGGACCTGCTTCTGGAAGGCGCAGGGCTGCAGGTCCCCGGGGCATCTTTaGACGGGTCCTGCATCCAGC +
Preference number: 4 (lower is better)
Translates to: RWALALFGTCFWKAQGCRSPGHL*TGPASS
Trigger: GCTGGATGCAGGACCCGTCCAAAGATGCCCCGGGGA...CCTGCAGCCCTGCGCCTTCCAGAAGCAGGTCCCAAATAAAGCCAGTGCCCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CCA 90 bp CTCCTGGCTGGGTGCTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCCAGTCCCCGGGGCATCTTTaGACGGGTCCTGCATCCAGC +
Preference number: 4 (lower is better)
Translates to: LLAGCSAGHTSSFPHKSQSPGHL*TGPASS
Trigger: GCTGGATGCAGGACCCGTCCAAAGATGCCCCGGGGA...CTGGGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAGCACCCAGCCAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CCA 90 bp CTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCCAGGTCTAGGCCAACCCCAAAGGCCAGCAACGTaGGCTGACACCCCTCCCCGG +
Preference number: 4 (lower is better)
Translates to: LSWSHQQLSPQIPGLGQPQRPAT*ADTPPR
Trigger: CCGGGGAGGGGTGTCAGCCCACGTTGCTGGCCTTTG...GGGTTGGCCTAGACCTGGGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CCA 90 bp GCTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCCAGGTCTAGGCCAACCGGTCTAGGCCAACCCTaGCCTGCGGCCGCTGTTACC +
Preference number: 4 (lower is better)
Translates to: AQLVTPAAFPTNPRSRPTGLGQP*PAAAVT
Trigger: GGTAACAGCGGCCGCAGGCCAGGGTTGGCCTAGACC...GGTTGGCCTAGACCTGGGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CCA 90 bp AGGTCTAGGCCAACCCTGGCCTGCGGCCGCTGTTACCACCTCAGACACTGGTCTTTTGGGACCTGCTTCTaGAAGGCGCAGGGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: RSRPTLACGRCYHLRHWSFGTCF*KAQGCR
Trigger: CCTGCAGCCCTGCGCCTTCCAGAAGCAGGTCCCAAA...AGACCAGTGTCTGAGGTGGTAACAGCGGCCGCAGGCCAGGGTTGGCCTAGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR TCA 90 bp CTCCTGGCTGGGTGCTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCCAGCCCACTCCACGGCTGTaGCTACAGCACCGGACACAA +
Preference number: 4 (lower is better)
Translates to: LLAGCSAGHTSSFPHKSQPTPRL*LQHRTQ
Trigger: TTGTGTCCGGTGCTGTAGTCACAGCCGTGGAGTGGG...CTGGGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAGCACCCAGCCAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR TCA 90 bp CTCCTGGCTGGGTGCTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCCAGGGGTGCTCTGGTAGGTaGAGGGGTCCACGTCAATGG +
Preference number: 4 (lower is better)
Translates to: LLAGCSAGHTSSFPHKSQGCSGR*RGPRQW
Trigger: CCATTGACGTGGACCCCTTCACCTACCAGAGCACCC...CTGGGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAGCACCCAGCCAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR TCA 90 bp ACACCAGCAGCTTTCCCCACAAATCCCAGGTCTAGGCCAACCCTGGCCTGCGGCGATCCCTACTCCTCTTaGCCCCAAAGGCCAGCAACG +
Preference number: 4 (lower is better)
Translates to: TPAAFPTNPRSRPTLACGDPYSS*PQRPAT
Trigger: CGTTGCTGGCCTTTGGGGTCAAGAGGAGTAGGGATC...GCCGCAGGCCAGGGTTGGCCTAGACCTGGGATTTGTGGGGAAAGCTGCTGGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR GCA 90 bp CTCAGATTTTCTGGGTTCACAGGCCCAACCTTCCGTGTCCCCCAAGGCGTTCCGTCGGTGAGCTTCCTCTaGAGCAGGGGGTGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: LRFSGFTGPTFRVPQGVPSVSFL*SRGCGW
Trigger: CCACCCACACCCCCTGCTGCAGAGGAAGCTCACCGA...CGGAACGCCTTGGGGGACACGGAAGGTTGGGCCTGTGAACCCAGAAAATCTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000565123.5
CDS-3UTR GCA 90 bp CTGGGTGCTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCCAGGTCTAGGGCGTGCTCCTTCCGGTaGTTCCAGGTGAGGACCGAC +
Preference number: 4 (lower is better)
Translates to: LGAQLVTPAAFPTNPRSRACSFR*FQVRTD
Trigger: GTCGGTCCTCACCTGGAAGCACCGGAAGGAGCACGC...CCTAGACCTGGGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAGCACCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR GCA 90 bp TCAGATTTTCTGGGTTCACAGGCCCAACCTTCCGTGTCCCCCAAGGCGTTCCGGGCGTGCTCCTTCCGGTaGTTCCAGGTGAGGACCGAC +
Preference number: 4 (lower is better)
Translates to: SDFLGSQAQPSVSPKAFRACSFR*FQVRTD
Trigger: GTCGGTCCTCACCTGGAAGCACCGGAAGGAGCACGC...CCGGAACGCCTTGGGGGACACGGAAGGTTGGGCCTGTGAACCCAGAAAATCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565123.5
CDS-3UTR GCA 90 bp AGGTCTAGGCCAACCCTGGCCTGCGGCCGCTGTTACCACCTCAGACACTGGTCTTCCCGCATCATCTGGTaGACCTTGTGGTACTCGGGG +
Preference number: 4 (lower is better)
Translates to: RSRPTLACGRCYHLRHWSSRIIW*TLWYSG
Trigger: CCCCGAGTACCACAAGGTGCACCAGATGATGCGGGA...AGACCAGTGTCTGAGGTGGTAACAGCGGCCGCAGGCCAGGGTTGGCCTAGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR GCA 90 bp ACACCAGCAGCTTTCCCCACAAATCCCAGGTCTAGGCCAACCCTGGCCTGCGGCTCCCGCATCATCTGGTaGACCTTGTGGTACTCGGGG +
Preference number: 4 (lower is better)
Translates to: TPAAFPTNPRSRPTLACGSRIIW*TLWYSG
Trigger: CCCCGAGTACCACAAGGTGCACCAGATGATGCGGGA...GCCGCAGGCCAGGGTTGGCCTAGACCTGGGATTTGTGGGGAAAGCTGCTGGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR GCA 90 bp CAGGTGGGCACTGGCTTTATTTGGGACCTGCTTCTGGAAGGCGCAGGGCTGCAGGGCGACAGGATGGACTaGTCCCGCATCATCTGGTGC +
Preference number: 4 (lower is better)
Translates to: QVGTGFIWDLLLEGAGLQGDRMD*SRIIWC
Trigger: GCACCAGATGATGCGGGAGCAGTCCATCCTGTCGCC...CTGCAGCCCTGCGCCTTCCAGAAGCAGGTCCCAAATAAAGCCAGTGCCCACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR GCA 90 bp CTGGGTGCTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCCAGGTCTAGGGGTCTCCTGGCTGGGTaGTCAGCTGGTCACACCAGC +
Preference number: 4 (lower is better)
Translates to: LGAQLVTPAAFPTNPRSRGLLAG*SAGHTS
Trigger: GCTGGTGTGACCAGCTGAGCACCCAGCCAGGAGACC...CCTAGACCTGGGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAGCACCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR GCA 90 bp CCCACAAATCCCAGGTCTAGGCCAACCCTGGCCTGCGGCCGCTGTTACCACCTCGCTTTATTTGGGACCTaGTTCTGGAAGGCGCAGGGC +
Preference number: 4 (lower is better)
Translates to: PTNPRSRPTLACGRCYHLALFGT*FWKAQG
Trigger: GCCCTGCGCCTTCCAGAAGCAGGTCCCAAATAAAGC...GAGGTGGTAACAGCGGCCGCAGGCCAGGGTTGGCCTAGACCTGGGATTTGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CCA 90 bp AGGTGGGCACTGGCTTTATTTGGGACCTGCTTCTGGAAGGCGCAGGGCTGCAGGCTGTGGGGCGAGACGTaGACTTTCCTCCCTGCCATC +
Preference number: 4 (lower is better)
Translates to: RWALALFGTCFWKAQGCRLWGET*TFLPAI
Trigger: GATGGCAGGGAGGAAAGTCCACGTCTCGCCCCACAG...CCTGCAGCCCTGCGCCTTCCAGAAGCAGGTCCCAAATAAAGCCAGTGCCCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361711.7
CDS-3UTR CCA 90 bp CTGGGTGCTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCCAGGTCTAGGGACCCAGGAAGGAGGTaGGCTTCCCTGGACCCTGTC +
Preference number: 4 (lower is better)
Translates to: LGAQLVTPAAFPTNPRSRDPGRR*ASLDPV
Trigger: GACAGGGTCCAGGGAAGCCCACCTCCTTCCTGGGTC...CCTAGACCTGGGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAGCACCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361711.7
CDS-3UTR CCA 90 bp GATCACCTTGGGCACATGTCATTAGGACTTCCTGAGGCTGTCACGGGCGCGTCCCTGCTGGCGCCGAGGTaGTCCTTTCTGGAGGAGCTC +
Preference number: 4 (lower is better)
Translates to: DHLGHMSLGLPEAVTGASLLAPR*SFLEEL
Trigger: GAGCTCCTCCAGAAAGGACCACCTCGGCGCCAGCAG...GGACGCGCCCGTGACAGCCTCAGGAAGTCCTAATGACATGTGCCCAAGGTGATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565123.5
CDS-3UTR CCA 90 bp CAGGTGGGCACTGGCTTTATTTGGGACCTGCTTCTGGAAGGCGCAGGGCTGCAGGGGGGTGTGGGTGGATaGCATCTGGCTTCGTGTAGG +
Preference number: 4 (lower is better)
Translates to: QVGTGFIWDLLLEGAGLQGGVGG*HLASCR
Trigger: CCTACACGAAGCCAGATGCCATCCACCCACACCCCC...CTGCAGCCCTGCGCCTTCCAGAAGCAGGTCCCAAATAAAGCCAGTGCCCACCTG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CCA 90 bp GGTCTCCTGGCTGGGTGCTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCGGGGGTGTGGGTGGATaGCATCTGGCTTCGTGTAGG +
Preference number: 4 (lower is better)
Translates to: GLLAGCSAGHTSSFPHKSGGVGG*HLASCR
Trigger: CCTACACGAAGCCAGATGCCATCCACCCACACCCCC...GGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAGCACCCAGCCAGGAGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CCA 90 bp AGGTGGGCACTGGCTTTATTTGGGACCTGCTTCTGGAAGGCGCAGGGCTGCAGGAGCAGGGGGTGTGGGTaGATGGCATCTGGCTTCGTG +
Preference number: 4 (lower is better)
Translates to: RWALALFGTCFWKAQGCRSRGCG*MASGFV
Trigger: CACGAAGCCAGATGCCATCCACCCACACCCCCTGCT...CCTGCAGCCCTGCGCCTTCCAGAAGCAGGTCCCAAATAAAGCCAGTGCCCACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CCA 90 bp CTCCTGGCTGGGTGCTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCCAGCTGCAGCAGGGGGTGTaGGTGGATGGCATCTGGCTT +
Preference number: 4 (lower is better)
Translates to: LLAGCSAGHTSSFPHKSQLQQGV*VDGIWL
Trigger: AAGCCAGATGCCATCCACCCACACCCCCTGCTGCAG...CTGGGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAGCACCCAGCCAGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CCA 90 bp GCTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCCAGGTCTAGGCCAACCGAACCACGTGGGGGATaGCGTGCTCCTTCCGGTGCT +
Preference number: 4 (lower is better)
Translates to: AQLVTPAAFPTNPRSRPTEPRGG*RAPSGA
Trigger: AGCACCGGAAGGAGCACGCCATCCCCCACGTGGTTC...GGTTGGCCTAGACCTGGGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CCA 90 bp GGTCTAGGCCAACCCTGGCCTGCGGCCGCTGTTACCACCTCAGACACTGGTCTACCCATCCACTGGCCTTaGCTCAGGATCACCATGGAG +
Preference number: 4 (lower is better)
Translates to: GLGQPWPAAAVTTSDTGLPIHWP*LRITME
Trigger: CTCCATGGTGATCCTGAGCCAAGGCCAGTGGATGGG...TAGACCAGTGTCTGAGGTGGTAACAGCGGCCGCAGGCCAGGGTTGGCCTAGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CCA 90 bp GCTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCCAGGTCTAGGCCAACCGGGAGCCCCATCCACTaGCCTTGGCTCAGGATCACC +
Preference number: 4 (lower is better)
Translates to: AQLVTPAAFPTNPRSRPTGSPIH*PWLRIT
Trigger: GGTGATCCTGAGCCAAGGCCAGTGGATGGGGCTCCC...GGTTGGCCTAGACCTGGGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CCA 90 bp CACCTTGGGCACATGTCATTAGGACTTCCTGAGGCTGTCACGGGCGCGTCCTCAGGGAGCCCCATCCACTaGCCTTGGCTCAGGATCACC +
Preference number: 4 (lower is better)
Translates to: HLGHMSLGLPEAVTGASSGSPIH*PWLRIT
Trigger: GGTGATCCTGAGCCAAGGCCAGTGGATGGGGCTCCC...TGAGGACGCGCCCGTGACAGCCTCAGGAAGTCCTAATGACATGTGCCCAAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565123.5
CDS-3UTR CCA 90 bp GCTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCCAGGTCTAGGCCAACCTGTCGAACGTGCCTGTaGCGAGGACCACGTTGCGGG +
Preference number: 4 (lower is better)
Translates to: AQLVTPAAFPTNPRSRPTCRTCL*RGPRCG
Trigger: CCCGCAACGTGGTCCTCGCCACAGGCACGTTCGACA...GGTTGGCCTAGACCTGGGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CCA 90 bp GGTCTCCTGGCTGGGTGCTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCGCAGACAGCTCATGGTaGATGAAGGGCAGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: GLLAGCSAGHTSSFPHKSADSSW*MKGRAS
Trigger: GGAGGCCCTGCCCTTCATCCACCATGAGCTGTCTGC...GGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAGCACCCAGCCAGGAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CCA 90 bp AGGCCAACCCTGGCCTGCGGCCGCTGTTACCACCTCAGACACTGGTCTAAGTCCAACCCTCATAGGGGCTaGGCGACAGGATGGACTGCT +
Preference number: 4 (lower is better)
Translates to: RPTLACGRCYHLRHWSKSNPHRG*ATGWTA
Trigger: AGCAGTCCATCCTGTCGCCCAGCCCCTATGAGGGTT...GGACTTAGACCAGTGTCTGAGGTGGTAACAGCGGCCGCAGGCCAGGGTTGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CCA 90 bp ACACCAGCAGCTTTCCCCACAAATCCCAGGTCTAGGCCAACCCTGGCCTGCGGCTTGGCGCTCAGCGGCTaGTCAGGATCCACTGCAAAG +
Preference number: 4 (lower is better)
Translates to: TPAAFPTNPRSRPTLACGLALSG*SGSTAK
Trigger: CTTTGCAGTGGATCCTGACCAGCCGCTGAGCGCCAA...GCCGCAGGCCAGGGTTGGCCTAGACCTGGGATTTGTGGGGAAAGCTGCTGGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CCA 90 bp CTCCTGGCTGGGTGCTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCCAGCAATGGGGTTCCTCTTaGCGCTCAGCGGCTGGTCAG +
Preference number: 4 (lower is better)
Translates to: LLAGCSAGHTSSFPHKSQQWGSS*RSAAGQ
Trigger: CTGACCAGCCGCTGAGCGCCAAGAGGAACCCCATTG...CTGGGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAGCACCCAGCCAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CCA 90 bp CACCAGCAGCTTTCCCCACAAATCCCAGGTCTAGGCCAACCCTGGCCTGCGGCCGTTAGGGTGGCTTCCTaGTCTCCTTCCTTAGCAGGG +
Preference number: 4 (lower is better)
Translates to: HQQLSPQIPGLGQPWPAAVRVAS*SPSLAG
Trigger: CCCTGCTAAGGAAGGAGACCAGGAAGCCACCCTAAC...GGCCGCAGGCCAGGGTTGGCCTAGACCTGGGATTTGTGGGGAAAGCTGCTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CCA 90 bp CCCACAAATCCCAGGTCTAGGCCAACCCTGGCCTGCGGCCGCTGTTACCACCTCTACCACCTCAGACACTaGTCTAAGTCCAGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: PTNPRSRPTLACGRCYHLYHLRH*SKSRAA
Trigger: GGCTGCCCTGGACTTAGACCAGTGTCTGAGGTGGTA...GAGGTGGTAACAGCGGCCGCAGGCCAGGGTTGGCCTAGACCTGGGATTTGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CCA 90 bp CAGGTGGGCACTGGCTTTATTTGGGACCTGCTTCTGGAAGGCGCAGGGCTGCAGTGCAGGTCTCCTGGCTaGGTGCTCAGCTGGTCACAC +
Preference number: 4 (lower is better)
Translates to: QVGTGFIWDLLLEGAGLQCRSPG*VLSWSH
Trigger: GTGTGACCAGCTGAGCACCCAGCCAGGAGACCTGCA...CTGCAGCCCTGCGCCTTCCAGAAGCAGGTCCCAAATAAAGCCAGTGCCCACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CCA 90 bp GCTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCCAGGTCTAGGCCAACCGGACCTGACAGGCAGTaGTGCAGGAGCCCAGTGAGC +
Preference number: 4 (lower is better)
Translates to: AQLVTPAAFPTNPRSRPTGPDRQ*CRSPVS
Trigger: GCTCACTGGGCTCCTGCACCACTGCCTGTCAGGTCC...GGTTGGCCTAGACCTGGGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393306.6
CDS-3UTR TCA 90 bp GTCTCCTGGCTGGGTGCTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCCGCCCCAGACCCTTCTTaGCCACGTAGTCCCTGTAGT +
Preference number: 4 (lower is better)
Translates to: VSWLGAQLVTPAAFPTNPAPDPS*PRSPCS
Trigger: ACTACAGGGACTACGTGGTCAAGAAGGGTCTGGGGC...GGGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAGCACCCAGCCAGGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR TCA 90 bp GGTCTCCTGGCTGGGTGCTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCGCCCCAGACCCTTCTTaGCCACGTAGTCCCTGTAGT +
Preference number: 4 (lower is better)
Translates to: GLLAGCSAGHTSSFPHKSAPDPS*PRSPCS
Trigger: ACTACAGGGACTACGTGGTCAAGAAGGGTCTGGGGC...GGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAGCACCCAGCCAGGAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR TCA 90 bp CTGGGTGCTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCCAGGTCTAGGTCTTGGGCAGCTGGTTaGACACCAGGCCAGGGTCGT +
Preference number: 4 (lower is better)
Translates to: LGAQLVTPAAFPTNPRSRSWAAG*TPGQGR
Trigger: ACGACCCTGGCCTGGTGTTCAACCAGCTGCCCAAGA...CCTAGACCTGGGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAGCACCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR TCA 90 bp GAGACCTGTCTCAGATTTTCTGGGTTCACAGGCCCAACCTTCCGTGTCCCCCAAGGTGCAGGAGCCCAGTaGGCCCGGCCAAGTTGTGCA +
Preference number: 4 (lower is better)
Translates to: ETCLRFSGFTGPTFRVPQGAGAQ*ARPSCA
Trigger: TGCACAACTTGGCCGGGCTCACTGGGCTCCTGCACC...TTGGGGGACACGGAAGGTTGGGCCTGTGAACCCAGAAAATCTGAGACAGGTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565123.5
CDS-3UTR GCA 90 bp CAGGTGGGCACTGGCTTTATTTGGGACCTGCTTCTGGAAGGCGCAGGGCTGCAGCAGTGGCCCGGCTGTTaGGAAGACCTCTTCGCTTCT +
Preference number: 4 (lower is better)
Translates to: QVGTGFIWDLLLEGAGLQQWPGC*EDLFAS
Trigger: AGAAGCGAAGAGGTCTTCGCAACAGCCGGGCCACTG...CTGCAGCCCTGCGCCTTCCAGAAGCAGGTCCCAAATAAAGCCAGTGCCCACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR GCA 90 bp AGGTCTAGGCCAACCCTGGCCTGCGGCCGCTGTTACCACCTCAGACACTGGTCTAGCGGACCTCTTGTCTaGACTGCATATTTCCCCGGC +
Preference number: 4 (lower is better)
Translates to: RSRPTLACGRCYHLRHWSSGPLV*TAYFPG
Trigger: GCCGGGGAAATATGCAGTGCAGACAAGAGGTCCGCT...AGACCAGTGTCTGAGGTGGTAACAGCGGCCGCAGGCCAGGGTTGGCCTAGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361711.7
CDS-3UTR GCA 90 bp TCAGATTTTCTGGGTTCACAGGCCCAACCTTCCGTGTCCCCCAAGGCGTTCCGGAGCCCGGCCAAGTTGTaGACTAGGAGGGTCAGGGGA +
Preference number: 4 (lower is better)
Translates to: SDFLGSQAQPSVSPKAFRSPAKL*TRRVRG
Trigger: TCCCCTGACCCTCCTAGTGCACAACTTGGCCGGGCT...CCGGAACGCCTTGGGGGACACGGAAGGTTGGGCCTGTGAACCCAGAAAATCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000565123.5
CDS-3UTR CCA 90 bp GTCTCCTGGCTGGGTGCTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCCCGAGGTGGTCCTTTCTaGAGGAGCTCATGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: VSWLGAQLVTPAAFPTNPRGGPF*RSSWLV
Trigger: CACCAGCCATGAGCTCCTCCAGAAAGGACCACCTCG...GGGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAGCACCCAGCCAGGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CCA 90 bp CTCAGATTTTCTGGGTTCACAGGCCCAACCTTCCGTGTCCCCCAAGGCGTTCCGGGGGGTGTGGGTGGATaGCATCTGGCTTCGTGTAGG +
Preference number: 4 (lower is better)
Translates to: LRFSGFTGPTFRVPQGVPGGVGG*HLASCR
Trigger: CCTACACGAAGCCAGATGCCATCCACCCACACCCCC...CGGAACGCCTTGGGGGACACGGAAGGTTGGGCCTGTGAACCCAGAAAATCTGAG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000565123.5
CDS-3UTR CCA 90 bp TCAGATTTTCTGGGTTCACAGGCCCAACCTTCCGTGTCCCCCAAGGCGTTCCGGAGCAGGGGGTGTGGGTaGATGGCATCTGGCTTCGTG +
Preference number: 4 (lower is better)
Translates to: SDFLGSQAQPSVSPKAFRSRGCG*MASGFV
Trigger: CACGAAGCCAGATGCCATCCACCCACACCCCCTGCT...CCGGAACGCCTTGGGGGACACGGAAGGTTGGGCCTGTGAACCCAGAAAATCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000565123.5
CDS-3UTR CCA 90 bp GGTCTCCTGGCTGGGTGCTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCGGCTCAGGATCACCATaGAGCCTTCGATGGAGTGCC +
Preference number: 4 (lower is better)
Translates to: GLLAGCSAGHTSSFPHKSGSGSP*SLRWSA
Trigger: GGCACTCCATCGAAGGCTCCATGGTGATCCTGAGCC...GGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAGCACCCAGCCAGGAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CCA 90 bp CAGGTGGGCACTGGCTTTATTTGGGACCTGCTTCTGGAAGGCGCAGGGCTGCAGCCCATCCACTGGCCTTaGCTCAGGATCACCATGGAG +
Preference number: 4 (lower is better)
Translates to: QVGTGFIWDLLLEGAGLQPIHWP*LRITME
Trigger: CTCCATGGTGATCCTGAGCCAAGGCCAGTGGATGGG...CTGCAGCCCTGCGCCTTCCAGAAGCAGGTCCCAAATAAAGCCAGTGCCCACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CCA 90 bp GTCTCCTGGCTGGGTGCTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCCAGCATCTTGGGCAGCTaGTTGAACACCAGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: VSWLGAQLVTPAAFPTNPSILGS*LNTRPG
Trigger: CCCTGGCCTGGTGTTCAACCAGCTGCCCAAGATGCT...GGGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAGCACCCAGCCAGGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CCA 90 bp CTCCTGGCTGGGTGCTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCCAGAGCATCTTGGGCAGCTaGTTGAACACCAGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: LLAGCSAGHTSSFPHKSQSILGS*LNTRPG
Trigger: CCCTGGCCTGGTGTTCAACCAGCTGCCCAAGATGCT...CTGGGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAGCACCCAGCCAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CCA 90 bp AGGCCAACCCTGGCCTGCGGCCGCTGTTACCACCTCAGACACTGGTCTAAGTCCTGCTCCCGCATCATCTaGTGCACCTTGTGGTACTCG +
Preference number: 4 (lower is better)
Translates to: RPTLACGRCYHLRHWSKSCSRII*CTLWYS
Trigger: CGAGTACCACAAGGTGCACCAGATGATGCGGGAGCA...GGACTTAGACCAGTGTCTGAGGTGGTAACAGCGGCCGCAGGCCAGGGTTGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CCA 90 bp GCTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCCAGGTCTAGGCCAACCGGCTGGGCGACAGGATaGACTGCTCCCGCATCATCT +
Preference number: 4 (lower is better)
Translates to: AQLVTPAAFPTNPRSRPTGWATG*TAPASS
Trigger: AGATGATGCGGGAGCAGTCCATCCTGTCGCCCAGCC...GGTTGGCCTAGACCTGGGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CCA 90 bp GGTCTAGGCCAACCCTGGCCTGCGGCCGCTGTTACCACCTCAGACACTGGTCTATCCTGGAACACGGCCTaGCAGTCTTCCTTGAAGCAC +
Preference number: 4 (lower is better)
Translates to: GLGQPWPAAAVTTSDTGLSWNTA*QSSLKH
Trigger: GTGCTTCAAGGAAGACTGCCAGGCCGTGTTCCAGGA...TAGACCAGTGTCTGAGGTGGTAACAGCGGCCGCAGGCCAGGGTTGGCCTAGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CCA 90 bp CTGGGTGCTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCCAGGTCTAGGACACCCTCGAGGTCCTaGAACACGGCCTGGCAGTCT +
Preference number: 4 (lower is better)
Translates to: LGAQLVTPAAFPTNPRSRTPSRS*NTAWQS
Trigger: AGACTGCCAGGCCGTGTTCCAGGACCTCGAGGGTGT...CCTAGACCTGGGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAGCACCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CCA 90 bp AGGTGGGCACTGGCTTTATTTGGGACCTGCTTCTGGAAGGCGCAGGGCTGCAGGTTGGCGCTCAGCGGCTaGTCAGGATCCACTGCAAAG +
Preference number: 4 (lower is better)
Translates to: RWALALFGTCFWKAQGCRLALSG*SGSTAK
Trigger: CTTTGCAGTGGATCCTGACCAGCCGCTGAGCGCCAA...CCTGCAGCCCTGCGCCTTCCAGAAGCAGGTCCCAAATAAAGCCAGTGCCCACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CCA 90 bp CCTGGCTGGGTGCTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCCAGGTAGGGGTCCACGTCAATaGGGTTCCTCTTGGCGCTCA +
Preference number: 4 (lower is better)
Translates to: PGWVLSWSHQQLSPQIPGRGPRQ*GSSWRS
Trigger: TGAGCGCCAAGAGGAACCCCATTGACGTGGACCCCT...ACCTGGGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAGCACCCAGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR TCA 90 bp CCTGGCTGGGTGCTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCCAGGTTCCGGTGCTTCCAGGTaGGGACCGACTTCATGTTTC +
Preference number: 4 (lower is better)
Translates to: PGWVLSWSHQQLSPQIPGSGASR*GPTSCF
Trigger: GAAACATGAAGTCGGTCCTCACCTGGAAGCACCGGA...ACCTGGGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAGCACCCAGCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR TCA 90 bp GCTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCCAGGTCTAGGCCAACCGATCCCTACTCCTCTTaGCCCCAAAGGCCAGCAACG +
Preference number: 4 (lower is better)
Translates to: AQLVTPAAFPTNPRSRPTDPYSS*PQRPAT
Trigger: CGTTGCTGGCCTTTGGGGTCAAGAGGAGTAGGGATC...GGTTGGCCTAGACCTGGGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR GCA 90 bp CTGGGTGCTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCCAGGTCTAGGCAGTGGCCCGGCTGTTaGGAAGACCTCTTCGCTTCT +
Preference number: 4 (lower is better)
Translates to: LGAQLVTPAAFPTNPRSRQWPGC*EDLFAS
Trigger: AGAAGCGAAGAGGTCTTCGCAACAGCCGGGCCACTG...CCTAGACCTGGGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAGCACCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR GCA 90 bp TCACACCAGCAGCTTTCCCCACAAATCCCAGGTCTAGGCCAACCCTGGCCTGCGTCTTTGGACGGGTCCTaGATCCAGCAGGGATGTGGT +
Preference number: 4 (lower is better)
Translates to: SHQQLSPQIPGLGQPWPASLDGS*IQQGCG
Trigger: ACCACATCCCTGCTGGATGCAGGACCCGTCCAAAGA...CGCAGGCCAGGGTTGGCCTAGACCTGGGATTTGTGGGGAAAGCTGCTGGTGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CCA 90 bp CTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCCAGGTCTAGGCCAACCCCGAGGTGGTCCTTTCTaGAGGAGCTCATGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: LSWSHQQLSPQIPGLGQPRGGPF*RSSWLV
Trigger: CACCAGCCATGAGCTCCTCCAGAAAGGACCACCTCG...GGGTTGGCCTAGACCTGGGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CCA 90 bp CTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCCAGGTCTAGGCCAACCCGGCTCAGGATCACCATaGAGCCTTCGATGGAGTGCC +
Preference number: 4 (lower is better)
Translates to: LSWSHQQLSPQIPGLGQPGSGSP*SLRWSA
Trigger: GGCACTCCATCGAAGGCTCCATGGTGATCCTGAGCC...GGGTTGGCCTAGACCTGGGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CCA 90 bp CTGGGTGCTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCCAGGTCTAGGAACCCTCATAGGGGCTaGGCGACAGGATGGACTGCT +
Preference number: 4 (lower is better)
Translates to: LGAQLVTPAAFPTNPRSRNPHRG*ATGWTA
Trigger: AGCAGTCCATCCTGTCGCCCAGCCCCTATGAGGGTT...CCTAGACCTGGGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAGCACCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CCA 90 bp GCTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCCAGGTCTAGGCCAACCAGGGGTCCACGTCAATaGGGTTCCTCTTGGCGCTCA +
Preference number: 4 (lower is better)
Translates to: AQLVTPAAFPTNPRSRPTRGPRQ*GSSWRS
Trigger: TGAGCGCCAAGAGGAACCCCATTGACGTGGACCCCT...GGTTGGCCTAGACCTGGGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CCA 90 bp GGTCTAGGCCAACCCTGGCCTGCGGCCGCTGTTACCACCTCAGACACTGGTCTACATCCAGCAGGGATGTaGTCATCTCTGTCCTCTCAG +
Preference number: 4 (lower is better)
Translates to: GLGQPWPAAAVTTSDTGLHPAGM*SSLSSQ
Trigger: CTGAGAGGACAGAGATGACCACATCCCTGCTGGATG...TAGACCAGTGTCTGAGGTGGTAACAGCGGCCGCAGGCCAGGGTTGGCCTAGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CCA 90 bp TCACACCAGCAGCTTTCCCCACAAATCCCAGGTCTAGGCCAACCCTGGCCTGCGTACCACCTCAGACACTaGTCTAAGTCCAGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: SHQQLSPQIPGLGQPWPAYHLRH*SKSRAA
Trigger: GGCTGCCCTGGACTTAGACCAGTGTCTGAGGTGGTA...CGCAGGCCAGGGTTGGCCTAGACCTGGGATTTGTGGGGAAAGCTGCTGGTGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CCA 90 bp AGGTCTAGGCCAACCCTGGCCTGCGGCCGCTGTTACCACCTCAGACACTGGTCTGGCACTGGCTTTATTTaGGACCTGCTTCTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: RSRPTLACGRCYHLRHWSGTGFI*DLLLEG
Trigger: GCCTTCCAGAAGCAGGTCCCAAATAAAGCCAGTGCC...AGACCAGTGTCTGAGGTGGTAACAGCGGCCGCAGGCCAGGGTTGGCCTAGACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CCA 90 bp GAGACCTGTCTCAGATTTTCTGGGTTCACAGGCCCAACCTTCCGTGTCCCCCAAGGACCTGACAGGCAGTaGTGCAGGAGCCCAGTGAGC +
Preference number: 4 (lower is better)
Translates to: ETCLRFSGFTGPTFRVPQGPDRQ*CRSPVS
Trigger: GCTCACTGGGCTCCTGCACCACTGCCTGTCAGGTCC...TTGGGGGACACGGAAGGTTGGGCCTGTGAACCCAGAAAATCTGAGACAGGTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565123.5
CDS-3UTR TCA 90 bp GCTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCCAGGTCTAGGCCAACCTCCGGTGCTTCCAGGTaGGGACCGACTTCATGTTTC +
Preference number: 4 (lower is better)
Translates to: AQLVTPAAFPTNPRSRPTSGASR*GPTSCF
Trigger: GAAACATGAAGTCGGTCCTCACCTGGAAGCACCGGA...GGTTGGCCTAGACCTGGGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR GCA 90 bp TCACACCAGCAGCTTTCCCCACAAATCCCAGGTCTAGGCCAACCCTGGCCTGCGCCTCTTCGCTTCTTCTaGATCCAGTCCTTGACCTCC +
Preference number: 4 (lower is better)
Translates to: SHQQLSPQIPGLGQPWPAPLRFF*IQSLTS
Trigger: GGAGGTCAAGGACTGGATGCAGAAGAAGCGAAGAGG...CGCAGGCCAGGGTTGGCCTAGACCTGGGATTTGTGGGGAAAGCTGCTGGTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR GCA 90 bp CTCCTGGCTGGGTGCTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCCAGCCTCTTCGCTTCTTCTaGATCCAGTCCTTGACCTCC +
Preference number: 4 (lower is better)
Translates to: LLAGCSAGHTSSFPHKSQPLRFF*IQSLTS
Trigger: GGAGGTCAAGGACTGGATGCAGAAGAAGCGAAGAGG...CTGGGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAGCACCCAGCCAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR GCA 90 bp CCTGGCTGGGTGCTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCCAGGTCCGGACACAAAGTTATaGCCCAGACCCTTCTTGACC +
Preference number: 4 (lower is better)
Translates to: PGWVLSWSHQQLSPQIPGPDTKL*PRPFLT
Trigger: GGTCAAGAAGGGTCTGGGGCATAACTTTGTGTCCGG...ACCTGGGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAGCACCCAGCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR GCA 90 bp CTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCCAGGTCTAGGCCAACCCGCTTTATTTGGGACCTaGTTCTGGAAGGCGCAGGGC +
Preference number: 4 (lower is better)
Translates to: LSWSHQQLSPQIPGLGQPALFGT*FWKAQG
Trigger: GCCCTGCGCCTTCCAGAAGCAGGTCCCAAATAAAGC...GGGTTGGCCTAGACCTGGGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CCA 90 bp ACACCAGCAGCTTTCCCCACAAATCCCAGGTCTAGGCCAACCCTGGCCTGCGGCGAAGATTTGCTGATATaGGGAACTGTGGGGCGAGAC +
Preference number: 4 (lower is better)
Translates to: TPAAFPTNPRSRPTLACGEDLLI*GTVGRD
Trigger: GTCTCGCCCCACAGTTCCCCATATCAGCAAATCTTC...GCCGCAGGCCAGGGTTGGCCTAGACCTGGGATTTGTGGGGAAAGCTGCTGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361711.7
CDS-3UTR CCA 90 bp GGTCTCCTGGCTGGGTGCTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCTGGGTGGATGGCATCTaGCTTCGTGTAGGGTGTGTA +
Preference number: 4 (lower is better)
Translates to: GLLAGCSAGHTSSFPHKSWVDGI*LRVGCV
Trigger: TACACACCCTACACGAAGCCAGATGCCATCCACCCA...GGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAGCACCCAGCCAGGAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CCA 90 bp GTCTCCTGGCTGGGTGCTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCCTGGGTGGATGGCATCTaGCTTCGTGTAGGGTGTGTA +
Preference number: 4 (lower is better)
Translates to: VSWLGAQLVTPAAFPTNPWVDGI*LRVGCV
Trigger: TACACACCCTACACGAAGCCAGATGCCATCCACCCA...GGGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAGCACCCAGCCAGGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CCA 90 bp ACTGAGACCTGTCTCAGATTTTCTGGGTTCACAGGCCCAACCTTCCGTGTCCCCCTGCAGCAGGGGGTGTaGGTGGATGGCATCTGGCTT +
Preference number: 4 (lower is better)
Translates to: TETCLRFSGFTGPTFRVPLQQGV*VDGIWL
Trigger: AAGCCAGATGCCATCCACCCACACCCCCTGCTGCAG...GGGGACACGGAAGGTTGGGCCTGTGAACCCAGAAAATCTGAGACAGGTCTCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000565123.5
CDS-3UTR CCA 90 bp GGTCTCCTGGCTGGGTGCTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCATCTGGTGCACCTTGTaGTACTCGGGGTACAGCATC +
Preference number: 4 (lower is better)
Translates to: GLLAGCSAGHTSSFPHKSIWCTL*YSGYSI
Trigger: GATGCTGTACCCCGAGTACCACAAGGTGCACCAGAT...GGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAGCACCCAGCCAGGAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CCA 90 bp CTGGGTGCTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCCAGGTCTAGGTGCTCCCGCATCATCTaGTGCACCTTGTGGTACTCG +
Preference number: 4 (lower is better)
Translates to: LGAQLVTPAAFPTNPRSRCSRII*CTLWYS
Trigger: CGAGTACCACAAGGTGCACCAGATGATGCGGGAGCA...CCTAGACCTGGGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAGCACCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CCA 90 bp CTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCCAGGTCTAGGCCAACCCTCCTGGAACACGGCCTaGCAGTCTTCCTTGAAGCAC +
Preference number: 4 (lower is better)
Translates to: LSWSHQQLSPQIPGLGQPSWNTA*QSSLKH
Trigger: GTGCTTCAAGGAAGACTGCCAGGCCGTGTTCCAGGA...GGGTTGGCCTAGACCTGGGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CCA 90 bp CTGGGTGCTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCCAGGTCTAGGGTTAGGGTGGCTTCCTaGTCTCCTTCCTTAGCAGGG +
Preference number: 4 (lower is better)
Translates to: LGAQLVTPAAFPTNPRSRVRVAS*SPSLAG
Trigger: CCCTGCTAAGGAAGGAGACCAGGAAGCCACCCTAAC...CCTAGACCTGGGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAGCACCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CCA 90 bp GGTCTCCTGGCTGGGTGCTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCCATCCAGCAGGGATGTaGTCATCTCTGTCCTCTCAG +
Preference number: 4 (lower is better)
Translates to: GLLAGCSAGHTSSFPHKSHPAGM*SSLSSQ
Trigger: CTGAGAGGACAGAGATGACCACATCCCTGCTGGATG...GGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAGCACCCAGCCAGGAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CCA 90 bp CTCCTGGCTGGGTGCTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCCAGGGCACTGGCTTTATTTaGGACCTGCTTCTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: LLAGCSAGHTSSFPHKSQGTGFI*DLLLEG
Trigger: GCCTTCCAGAAGCAGGTCCCAAATAAAGCCAGTGCC...CTGGGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAGCACCCAGCCAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR GCA 90 bp CTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCCAGGTCTAGGCCAACCCCCGGACACAAAGTTATaGCCCAGACCCTTCTTGACC +
Preference number: 4 (lower is better)
Translates to: LSWSHQQLSPQIPGLGQPPDTKL*PRPFLT
Trigger: GGTCAAGAAGGGTCTGGGGCATAACTTTGTGTCCGG...GGGTTGGCCTAGACCTGGGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR GCA 90 bp CTTGGGCACATGTCATTAGGACTTCCTGAGGCTGTCACGGGCGCGTCCTCAACCCACCTTCGCTTCTTCTaGATCCAGTCCTTGACCTCC +
Preference number: 4 (lower is better)
Translates to: LGHMSLGLPEAVTGASSTHLRFF*IQSLTS
Trigger: GGAGGTCAAGGACTGGATGCAGAAGAAGCGAAGGTG...GGTTGAGGACGCGCCCGTGACAGCCTCAGGAAGTCCTAATGACATGTGCCCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565123.5
CDS-3UTR CCA 90 bp TTAACTGAGACCTGTCTCAGATTTTCTGGGTTCACAGGCCCAACCTTCCGTGTCAGGGCCACGGGGCTTTaGGATCGGCCTTCGAGGCCT +
Preference number: 4 (lower is better)
Translates to: LTETCLRFSGFTGPTFRVRATGL*DRPSRP
Trigger: AGGCCTCGAAGGCCGATCCCAAAGCCCCGTGGCCCT...GACACGGAAGGTTGGGCCTGTGAACCCAGAAAATCTGAGACAGGTCTCAGTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565123.5
CDS-3UTR CCA 90 bp GAGACCTGTCTCAGATTTTCTGGGTTCACAGGCCCAACCTTCCGTGTCCCCCAACCCATCCACTGGCCTTaGCTCAGGATCACCATGGAG +
Preference number: 4 (lower is better)
Translates to: ETCLRFSGFTGPTFRVPQPIHWP*LRITME
Trigger: CTCCATGGTGATCCTGAGCCAAGGCCAGTGGATGGG...TTGGGGGACACGGAAGGTTGGGCCTGTGAACCCAGAAAATCTGAGACAGGTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565123.5
CDS-3UTR CCA 90 bp GCTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCCAGGTCTAGGCCAACCATCTGGTGCACCTTGTaGTACTCGGGGTACAGCATC +
Preference number: 4 (lower is better)
Translates to: AQLVTPAAFPTNPRSRPTIWCTL*YSGYSI
Trigger: GATGCTGTACCCCGAGTACCACAAGGTGCACCAGAT...GGTTGGCCTAGACCTGGGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR TCA 90 bp GGTCTAGGCCAACCCTGGCCTGCGGCCGCTGTTACCACCTCAGACACTGGTCTAAATTTGAAGATTTGCTaGTATGGGGAACTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: GLGQPWPAAAVTTSDTGLNLKIC*YGELWG
Trigger: GCCCCACAGTTCCCCATATCAGCAAATCTTCAAATT...TAGACCAGTGTCTGAGGTGGTAACAGCGGCCGCAGGCCAGGGTTGGCCTAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361711.7
CDS-3UTR TCA 90 bp GAGACCTGTCTCAGATTTTCTGGGTTCACAGGCCCAACCTTCCGTGTCCCCCAATCCGGTGCTTCCAGGTaGGGACCGACTTCATGTTTC +
Preference number: 4 (lower is better)
Translates to: ETCLRFSGFTGPTFRVPQSGASR*GPTSCF
Trigger: GAAACATGAAGTCGGTCCTCACCTGGAAGCACCGGA...TTGGGGGACACGGAAGGTTGGGCCTGTGAACCCAGAAAATCTGAGACAGGTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565123.5
CDS-3UTR TCA 90 bp AGGTGGGCACTGGCTTTATTTGGGACCTGCTTCTGGAAGGCGCAGGGCTGCAGGTTTGAATGTGTAAACTaGGGCAGAGAGAGACAGGCA +
Preference number: 4 (lower is better)
Translates to: RWALALFGTCFWKAQGCRFECVN*GRERQA
Trigger: TGCCTGTCTCTCTCTGCCTCAGTTTACACATTCAAA...CCTGCAGCCCTGCGCCTTCCAGAAGCAGGTCCCAAATAAAGCCAGTGCCCACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361711.7
CDS-3UTR TCA 90 bp CTGAGGCTGTCACGGGCGCGTCCTCAACCTTGGAAAAATAAACTTTCTAAATTAGGCTGGCAGCGGACCTaGCAGGCAGTGGTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: LRLSRARPQPWKNKLSKLGWQRT*QAVVQE
Trigger: CTCCTGCACCACTGCCTGTCAGGTCCGCTGCCAGCC...TAATTTAGAAAGTTTATTTTTCCAAGGTTGAGGACGCGCCCGTGACAGCCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565123.5
CDS-3UTR TCA 90 bp GACTTCCTGAGGCTGTCACGGGCGCGTCCTCAACCTTGGAAAAATAAACTTTCTGTCATTAGGACTTCCTaGGGCTGTCACGGGCGCGTC +
Preference number: 4 (lower is better)
Translates to: DFLRLSRARPQPWKNKLSVIRTS*GCHGRV
Trigger: GACGCGCCCGTGACAGCCTCAGGAAGTCCTAATGAC...AGAAAGTTTATTTTTCCAAGGTTGAGGACGCGCCCGTGACAGCCTCAGGAAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565123.5
CDS-3UTR GCA 90 bp AGGTGGGCACTGGCTTTATTTGGGACCTGCTTCTGGAAGGCGCAGGGCTGCAGGGTGGACTTTCCTCCCTaGCATCTTGTTTACCTGTTA +
Preference number: 4 (lower is better)
Translates to: RWALALFGTCFWKAQGCRVDFPP*HLVYLL
Trigger: TAACAGGTAAACAAGATGGCAGGGAGGAAAGTCCAC...CCTGCAGCCCTGCGCCTTCCAGAAGCAGGTCCCAAATAAAGCCAGTGCCCACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361711.7
CDS-3UTR CCA 90 bp GAGACCTGTCTCAGATTTTCTGGGTTCACAGGCCCAACCTTCCGTGTCCCCCAATGGGTGGATGGCATCTaGCTTCGTGTAGGGTGTGTA +
Preference number: 4 (lower is better)
Translates to: ETCLRFSGFTGPTFRVPQWVDGI*LRVGCV
Trigger: TACACACCCTACACGAAGCCAGATGCCATCCACCCA...TTGGGGGACACGGAAGGTTGGGCCTGTGAACCCAGAAAATCTGAGACAGGTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565123.5
CDS-3UTR CCA 90 bp AGGCTGTCACGGGCGCGTCCTCAACCTTGGAAAAATAAACTTTCTAAATTAACTGGTCCTGGTCCAGGATaGAGACCCCCGGGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: RLSRARPQPWKNKLSKLTGPGPG*RPPGPR
Trigger: CCGAGGCCCCGGGGGTCTCCATCCTGGACCAGGACC...AGTTAATTTAGAAAGTTTATTTTTCCAAGGTTGAGGACGCGCCCGTGACAGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000565123.5
CDS-3UTR TCA 90 bp CACCAGCAGCTTTCCCCACAAATCCCAGGTCTAGGCCAACCCTGGCCTGCGGCCTGTTTACCTGTTAGGTaGTTATCGGTAACAGAATTG +
Preference number: 4 (lower is better)
Translates to: HQQLSPQIPGLGQPWPAACLPVR*LSVTEL
Trigger: CAATTCTGTTACCGATAATCACCTAACAGGTAAACA...GGCCGCAGGCCAGGGTTGGCCTAGACCTGGGATTTGTGGGGAAAGCTGCTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361711.7
CDS-3UTR TCA 90 bp AGGCCAACCCTGGCCTGCGGCCGCTGTTACCACCTCAGACACTGGTCTAAGTCCCCTTGTTCTAGAATTTaGAGATTTGCTGATATGGGG +
Preference number: 4 (lower is better)
Translates to: RPTLACGRCYHLRHWSKSPCSRI*RFADMG
Trigger: CCCCATATCAGCAAATCTTCAAATTCTAGAACAAGG...GGACTTAGACCAGTGTCTGAGGTGGTAACAGCGGCCGCAGGCCAGGGTTGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361711.7
CDS-3UTR TCA 90 bp AGGCTGTCACGGGCGCGTCCTCAACCTTGGAAAAATAAACTTTCTAAATTAACTTCTGCATCCAGTCCTTaGCCTCCAGGTCCGGGAGCC +
Preference number: 4 (lower is better)
Translates to: RLSRARPQPWKNKLSKLTSASSP*PPGPGA
Trigger: GGCTCCCGGACCTGGAGGTCAAGGACTGGATGCAGA...AGTTAATTTAGAAAGTTTATTTTTCCAAGGTTGAGGACGCGCCCGTGACAGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565123.5
CDS-3UTR GCA 90 bp AGGCTGTCACGGGCGCGTCCTCAACCTTGGAAAAATAAACTTTCTAAATTAACTACGTGGGGGATGGCGTaGTCCTTCCGGTGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: RLSRARPQPWKNKLSKLTTWGMA*SFRCFQ
Trigger: CTGGAAGCACCGGAAGGAGCACGCCATCCCCCACGT...AGTTAATTTAGAAAGTTTATTTTTCCAAGGTTGAGGACGCGCCCGTGACAGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000565123.5
CDS-3UTR CCA 90 bp CTGAGGCTGTCACGGGCGCGTCCTCAACCTTGGAAAAATAAACTTTCTAAATTAGGCTCAGGATCACCATaGAGCCTTCGATGGAGTGCC +
Preference number: 4 (lower is better)
Translates to: LRLSRARPQPWKNKLSKLGSGSP*SLRWSA
Trigger: GGCACTCCATCGAAGGCTCCATGGTGATCCTGAGCC...TAATTTAGAAAGTTTATTTTTCCAAGGTTGAGGACGCGCCCGTGACAGCCTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565123.5
CDS-3UTR CCA 90 bp TCAGATTTTCTGGGTTCACAGGCCCAACCTTCCGTGTCCCCCAAGGCGTTCCGGGCGCGTCCTCAACCTTaGAAAAATAAACTTTCTAAA +
Preference number: 4 (lower is better)
Translates to: SDFLGSQAQPSVSPKAFRARPQP*KNKLSK
Trigger: TTTAGAAAGTTTATTTTTCCAAGGTTGAGGACGCGC...CCGGAACGCCTTGGGGGACACGGAAGGTTGGGCCTGTGAACCCAGAAAATCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000565123.5
CDS GCA 90 bp GCAGGGCCTCCCCGGGGATGCCCAGCCGGGCCGGGCTGTCGAACGTaGCTGTGGCGAGGACCACGTTGCGGGCCCACAGCGAGAAGGGCT +
Preference number: 5 (lower is better)
Translates to: AGPPRGCPAGPGCRT*LWRGPRCGPTARRA
Trigger: AGCCCTTCTCGCTGTGGGCCCGCAACGTGGTCCTCGCCACAGGCACGTTCGACAGCCCGGCCCGGCTGGGCATCCCCGGGGAGGCCCTGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343939.6
ENST00000361711.7
ENST00000393306.6
CDS CCA 90 bp CCTCCCCGGGGATGCCCAGCCGGGCCGGGCTGTCGAACGTGCCTGTaGCGAGGACCACGTTGCGGGCCCACAGCGAGAAGGGCTGCTGGG +
Preference number: 5 (lower is better)
Translates to: PPRGCPAGPGCRTCL*RGPRCGPTARRAAG
Trigger: CCCAGCAGCCCTTCTCGCTGTGGGCCCGCAACGTGGTCCTCGCCACAGGCACGTTCGACAGCCCGGCCCGGCTGGGCATCCCCGGGGAGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343939.6
ENST00000361711.7
ENST00000393306.6
CDS CCA 90 bp ACCGCACCCACCCTTGTGGCGGCCTCCAGGGCAGACAGCTCATGGTaGATGAAGGGCAGGGCCTCCCCGGGGATGCCCAGCCGGGCCGGG +
Preference number: 5 (lower is better)
Translates to: TAPTLVAASRADSSW*MKGRASPGMPSRAG
Trigger: CCCGGCCCGGCTGGGCATCCCCGGGGAGGCCCTGCCCTTCATCCACCATGAGCTGTCTGCCCTGGAGGCCGCCACAAGGGTGGGTGCGGT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343939.6
ENST00000361711.7
ENST00000393306.6
CDS TCA 90 bp CACCCACCCTTGTGGCGGCCTCCAGGGCAGACAGCTCATGGTGGATaGAGGGCAGGGCCTCCCCGGGGATGCCCAGCCGGGCCGGGCTGT +
Preference number: 5 (lower is better)
Translates to: HPPLWRPPGQTAHGG*RAGPPRGCPAGPGC
Trigger: ACAGCCCGGCCCGGCTGGGCATCCCCGGGGAGGCCCTGCCCTTCATCCACCATGAGCTGTCTGCCCTGGAGGCCGCCACAAGGGTGGGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343939.6
ENST00000361711.7
ENST00000393306.6
CDS CCA 90 bp GTCACCGCACCCACCCTTGTGGCGGCCTCCAGGGCAGACAGCTCATaGTGGATGAAGGGCAGGGCCTCCCCGGGGATGCCCAGCCGGGCC +
Preference number: 5 (lower is better)
Translates to: VTAPTLVAASRADSS*WMKGRASPGMPSRA
Trigger: GGCCCGGCTGGGCATCCCCGGGGAGGCCCTGCCCTTCATCCACCATGAGCTGTCTGCCCTGGAGGCCGCCACAAGGGTGGGTGCGGTGAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343939.6
ENST00000361711.7
ENST00000393306.6
CDS CCA 90 bp CCTGTGGCGAGGACCACGTTGCGGGCCCACAGCGAGAAGGGCTGCTaGGCCTGGTTCCTGGTCAGGAAGCCGCTCACCTGGAAGAGGGGG +
Preference number: 5 (lower is better)
Translates to: PVARTTLRAHSEKGC*AWFLVRKPLTWKRG
Trigger: CCCCCTCTTCCAGGTGAGCGGCTTCCTGACCAGGAACCAGGCCCAGCAGCCCTTCTCGCTGTGGGCCCGCAACGTGGTCCTCGCCACAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343939.6
ENST00000361711.7
ENST00000393306.6
CDS GCA 90 bp GTGCCTGTGGCGAGGACCACGTTGCGGGCCCACAGCGAGAAGGGCTaGTGGGCCTGGTTCCTGGTCAGGAAGCCGCTCACCTGGAAGAGG +
Preference number: 5 (lower is better)
Translates to: VPVARTTLRAHSEKG*WAWFLVRKPLTWKR
Trigger: CCTCTTCCAGGTGAGCGGCTTCCTGACCAGGAACCAGGCCCAGCAGCCCTTCTCGCTGTGGGCCCGCAACGTGGTCCTCGCCACAGGCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343939.6
ENST00000361711.7
ENST00000393306.6
CDS CCA 90 bp GAGAAGGGCTGCTGGGCCTGGTTCCTGGTCAGGAAGCCGCTCACCTaGAAGAGGGGGCTGGAGTCCTGGGCCCCACAGCTGCTGGGATCG +
Preference number: 5 (lower is better)
Translates to: EKGCWAWFLVRKPLT*KRGLESWAPQLLGS
Trigger: CGATCCCAGCAGCTGTGGGGCCCAGGACTCCAGCCCCCTCTTCCAGGTGAGCGGCTTCCTGACCAGGAACCAGGCCCAGCAGCCCTTCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343939.6
ENST00000361711.7
ENST00000393306.6
CDS CCA 90 bp CGTGCGCCAAGGCCATGCTGCTCCTACAGAAGGCGCAGGAAACGGTaGCCCAAGTGCAGAGGCTCCGGCACACAGTGGAGCGTGGGGACC +
Preference number: 5 (lower is better)
Translates to: RAPRPCCSYRRRRKR*PKCRGSGTQWSVGT
Trigger: GGTCCCCACGCTCCACTGTGTGCCGGAGCCTCTGCACTTGGGCCACCGTTTCCTGCGCCTTCTGTAGGAGCAGCATGGCCTTGGCGCACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563248.2
CDS TCA 90 bp TTGGGGCTGGCAGCGGACCTGACAGGCAGTGGTGCAGGAGCCCAGTaGGCCCGGCCAAGTTGTGCACTAGGAGGGTCAGGGGAACACGGA +
Preference number: 5 (lower is better)
Translates to: LGLAADLTGSGAGAQ*ARPSCALGGSGEHG
Trigger: TCCGTGTTCCCCTGACCCTCCTAGTGCACAACTTGGCCGGGCTCACTGGGCTCCTGCACCACTGCCTGTCAGGTCCGCTGCCAGCCCCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393306.6
ENST00000565123.5
CDS TCA 90 bp GCGTTCCGGGGCGGCCTCACCTTCGCTTCTTCTGCATCCAGTCCTTaGCCTCCAGGTCCGGGAGCCCCATCCACTGGCCTTGGCTCAGGA +
Preference number: 5 (lower is better)
Translates to: AFRGGLTFASSASSP*PPGPGAPSTGLGSG
Trigger: TCCTGAGCCAAGGCCAGTGGATGGGGCTCCCGGACCTGGAGGTCAAGGACTGGATGCAGAAGAAGCGAAGGTGAGGCCGCCCCGGAACGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565123.5
CDS GCA 90 bp CCTGACAGGCAGTGGTGCAGGAGCCCAGTGAGCCCGGCCAAGTTGTaGACTAGGAGGGTCAGGGGAACACGGATCACAGAGTCCCCCGCG +
Preference number: 5 (lower is better)
Translates to: PDRQWCRSPVSPAKL*TRRVRGTRITESPA
Trigger: CGCGGGGGACTCTGTGATCCGTGTTCCCCTGACCCTCCTAGTGCACAACTTGGCCGGGCTCACTGGGCTCCTGCACCACTGCCTGTCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393306.6
ENST00000563543.1
ENST00000565123.5
ENST00000566667.2
CDS CCA 90 bp GGTCAGGAGGAGTGGGCGTCTTGCCCCAGGTCACCTGACAGGCAGTaGTGCAGGAGCCCAGTGAGCCCGGCCAAGTTGTGCACTAGGAGG +
Preference number: 5 (lower is better)
Translates to: GQEEWASCPRSPDRQ*CRSPVSPAKLCTRR
Trigger: CCTCCTAGTGCACAACTTGGCCGGGCTCACTGGGCTCCTGCACCACTGCCTGTCAGGTGACCTGGGGCAAGACGCCCACTCCTCCTGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563543.1
CDS CCA 90 bp GGAAACGGTGGCCCAAGTGCAGAGGCTCCGGCACACAGTGGAGCGTaGGGACCGTTTCTGGAGCACTCATCGCTCCCCACCACACCGGCA +
Preference number: 5 (lower is better)
Translates to: GNGGPSAEAPAHSGA*GPFLEHSSLPTTPA
Trigger: TGCCGGTGTGGTGGGGAGCGATGAGTGCTCCAGAAACGGTCCCCACGCTCCACTGTGTGCCGGAGCCTCTGCACTTGGGCCACCGTTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563248.2
CDS CCA 90 bp AGGCGCAGGAAACGGTGGCCCAAGTGCAGAGGCTCCGGCACACAGTaGAGCGTGGGGACCGTTTCTGGAGCACTCATCGCTCCCCACCAC +
Preference number: 5 (lower is better)
Translates to: RRRKRWPKCRGSGTQ*SVGTVSGALIAPHH
Trigger: GTGGTGGGGAGCGATGAGTGCTCCAGAAACGGTCCCCACGCTCCACTGTGTGCCGGAGCCTCTGCACTTGGGCCACCGTTTCCTGCGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563248.2
CDS-3UTR CAA 90 bp TCACACCAGCAGCTTTCCCCACAAATCCCAGGTCTAGGCCAACCCTGGCCTGCGCAGGGCCACGGGGCTTaGGGATCGGCCTTCGAGGCC +
Preference number: 5 (lower is better)
Translates to: SHQQLSPQIPGLGQPWPAQGHGA*GSAFEA
Trigger: GGCCTCGAAGGCCGATCCCAAAGCCCCGTGGCCCTG...CGCAGGCCAGGGTTGGCCTAGACCTGGGATTTGTGGGGAAAGCTGCTGGTGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CAA 90 bp AGGCCAACCCTGGCCTGCGGCCGCTGTTACCACCTCAGACACTGGTCTAAGTCCGTGGCGAGGACCACGTaGCGGGCCCACAGCGAGAAG +
Preference number: 5 (lower is better)
Translates to: RPTLACGRCYHLRHWSKSVARTT*RAHSEK
Trigger: CTTCTCGCTGTGGGCCCGCAACGTGGTCCTCGCCAC...GGACTTAGACCAGTGTCTGAGGTGGTAACAGCGGCCGCAGGCCAGGGTTGGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CAA 90 bp TCACACCAGCAGCTTTCCCCACAAATCCCAGGTCTAGGCCAACCCTGGCCTGCGTCACCGCACCCACCCTaGTGGCGGCCTCCAGGGCAG +
Preference number: 5 (lower is better)
Translates to: SHQQLSPQIPGLGQPWPASPHPP*WRPPGQ
Trigger: CTGCCCTGGAGGCCGCCACAAGGGTGGGTGCGGTGA...CGCAGGCCAGGGTTGGCCTAGACCTGGGATTTGTGGGGAAAGCTGCTGGTGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS TCA 90 bp CGTCTTGCCCCAGGTCACCTGACAGGCAGTGGTGCAGGAGCCCAGTaGGCCCGGCCAAGTTGTGCACTAGGAGGGTCAGGGGAACACGGA +
Preference number: 5 (lower is better)
Translates to: RLAPGHLTGSGAGAQ*ARPSCALGGSGEHG
Trigger: TCCGTGTTCCCCTGACCCTCCTAGTGCACAACTTGGCCGGGCTCACTGGGCTCCTGCACCACTGCCTGTCAGGTGACCTGGGGCAAGACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563543.1
CDS GCA 90 bp AGTGACACCATGCTCACGCAGGGCGAGCGTGCGCCAAGGCCATGCTaGTCCTACAGAAGGCGCAGGAAACGGTGGCCCAAGTGCAGAGGC +
Preference number: 5 (lower is better)
Translates to: SDTMLTQGERAPRPC*SYRRRRKRWPKCRG
Trigger: GCCTCTGCACTTGGGCCACCGTTTCCTGCGCCTTCTGTAGGAGCAGCATGGCCTTGGCGCACGCTCGCCCTGCGTGAGCATGGTGTCACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563248.2
CDS-3UTR CAA 90 bp CTGGGTGCTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCCAGGTCTAGGCAGGGCCACGGGGCTTaGGGATCGGCCTTCGAGGCC +
Preference number: 5 (lower is better)
Translates to: LGAQLVTPAAFPTNPRSRQGHGA*GSAFEA
Trigger: GGCCTCGAAGGCCGATCCCAAAGCCCCGTGGCCCTG...CCTAGACCTGGGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAGCACCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CAA 90 bp CTGGGTGCTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCCAGGTCTAGGTCACCGCACCCACCCTaGTGGCGGCCTCCAGGGCAG +
Preference number: 5 (lower is better)
Translates to: LGAQLVTPAAFPTNPRSRSPHPP*WRPPGQ
Trigger: CTGCCCTGGAGGCCGCCACAAGGGTGGGTGCGGTGA...CCTAGACCTGGGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAGCACCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CAA 90 bp AGGCCAACCCTGGCCTGCGGCCGCTGTTACCACCTCAGACACTGGTCTAAGTCCACAAACCTCACGAAGTaGTCCCCGGCCAGCGGCCCC +
Preference number: 5 (lower is better)
Translates to: RPTLACGRCYHLRHWSKSTNLTK*SPASGP
Trigger: GGGGCCGCTGGCCGGGGACAACTTCGTGAGGTTTGT...GGACTTAGACCAGTGTCTGAGGTGGTAACAGCGGCCGCAGGCCAGGGTTGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CAA 90 bp AGGTCTAGGCCAACCCTGGCCTGCGGCCGCTGTTACCACCTCAGACACTGGTCTACAAACCTCACGAAGTaGTCCCCGGCCAGCGGCCCC +
Preference number: 5 (lower is better)
Translates to: RSRPTLACGRCYHLRHWSTNLTK*SPASGP
Trigger: GGGGCCGCTGGCCGGGGACAACTTCGTGAGGTTTGT...AGACCAGTGTCTGAGGTGGTAACAGCGGCCGCAGGCCAGGGTTGGCCTAGACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CAA 90 bp ACACCAGCAGCTTTCCCCACAAATCCCAGGTCTAGGCCAACCCTGGCCTGCGGCCTCCCCGGGGCATCTTaGGACGGGTCCTGCATCCAG +
Preference number: 5 (lower is better)
Translates to: TPAAFPTNPRSRPTLACGLPGAS*DGSCIQ
Trigger: CTGGATGCAGGACCCGTCCAAAGATGCCCCGGGGAG...GCCGCAGGCCAGGGTTGGCCTAGACCTGGGATTTGTGGGGAAAGCTGCTGGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS GCA 90 bp AGGCCATGCTGCTCCTACAGAAGGCGCAGGAAACGGTGGCCCAAGTaGAGAGGCTCCGGCACACAGTGGAGCGTGGGGACCGTTTCTGGA +
Preference number: 5 (lower is better)
Translates to: RPCCSYRRRRKRWPK*RGSGTQWSVGTVSG
Trigger: TCCAGAAACGGTCCCCACGCTCCACTGTGTGCCGGAGCCTCTGCACTTGGGCCACCGTTTCCTGCGCCTTCTGTAGGAGCAGCATGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563248.2
CDS GCA 90 bp GAGAGTGACACCATGCTCACGCAGGGCGAGCGTGCGCCAAGGCCATaGTGCTCCTACAGAAGGCGCAGGAAACGGTGGCCCAAGTGCAGA +
Preference number: 5 (lower is better)
Translates to: ESDTMLTQGERAPRP*CSYRRRRKRWPKCR
Trigger: TCTGCACTTGGGCCACCGTTTCCTGCGCCTTCTGTAGGAGCAGCATGGCCTTGGCGCACGCTCGCCCTGCGTGAGCATGGTGTCACTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563248.2
CDS CCA 90 bp ATCCAGTCCTTGACCTCCAGGTCCGGGAGCCCCATCCACTGGCCTTaGCTCAGGATCACCATGGAGCCTTCGATGGAGTGCCAGGCTCCC +
Preference number: 5 (lower is better)
Translates to: IQSLTSRSGSPIHWP*LRITMEPSMECQAP
Trigger: GGGAGCCTGGCACTCCATCGAAGGCTCCATGGTGATCCTGAGCCAAGGCCAGTGGATGGGGCTCCCGGACCTGGAGGTCAAGGACTGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343939.6
ENST00000361711.7
ENST00000393306.6
ENST00000565123.5
CDS CCA 90 bp CAAGTGCAGAGGCTCCGGCACACAGTGGAGCGTGGGGACCGTTTCTaGAGCACTCATCGCTCCCCACCACACCGGCAGAGCTCAGCATCT +
Preference number: 5 (lower is better)
Translates to: QVQRLRHTVERGDRF*STHRSPPHRQSSAS
Trigger: AGATGCTGAGCTCTGCCGGTGTGGTGGGGAGCGATGAGTGCTCCAGAAACGGTCCCCACGCTCCACTGTGTGCCGGAGCCTCTGCACTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563248.2
CDS CCA 90 bp GCACCTGCCTGGAGTGAATCTGCCACAGGGAATGGGCCAGCGCTGTaGCCTGCCCCAGGAGCTGGGATGGACTTGGGGAAATGGAAGCAG +
Preference number: 5 (lower is better)
Translates to: APAWSESATGNGPAL*PAPGAGMDLGKWKQ
Trigger: CTGCTTCCATTTCCCCAAGTCCATCCCAGCTCCTGGGGCAGGCCACAGCGCTGGCCCATTCCCTGTGGCAGATTCACTCCAGGCAGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567707.1
CDS TCA 90 bp CCCGGCTGTTGCGAAGACCTCTTCGCTTCTTCTGCATCCAGTCCTTaGCCTCCAGGTCCGGGAGCCCCATCCACTGGCCTTGGCTCAGGA +
Preference number: 5 (lower is better)
Translates to: PGCCEDLFASSASSP*PPGPGAPSTGLGSG
Trigger: TCCTGAGCCAAGGCCAGTGGATGGGGCTCCCGGACCTGGAGGTCAAGGACTGGATGCAGAAGAAGCGAAGAGGTCTTCGCAACAGCCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343939.6
ENST00000361711.7
ENST00000393306.6
CDS TCA 90 bp CCTACCACGCCGATAAGTCCCAGCACGTGTTCCCACACTCAGAGCTaGGGGTTCCCCAGTGCCTGCCACCGTAGGAAGGACCAGGACACG +
Preference number: 5 (lower is better)
Translates to: PTTPISPSTCSHTQS*GFPSACHRRKDQDT
Trigger: CGTGTCCTGGTCCTTCCTACGGTGGCAGGCACTGGGGAACCCTCAGCTCTGAGTGTGGGAACACGTGCTGGGACTTATCGGCGTGGTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563248.2
CDS TCA 90 bp TTGAGGGACACAGTAGGATCACAGACGGGAAGCACCTGCCTGGAGTaGATCTGCCACAGGGAATGGGCCAGCGCTGTGGCCTGCCCCAGG +
Preference number: 5 (lower is better)
Translates to: LRDTVGSQTGSTCLE*ICHREWASAVACPR
Trigger: CCTGGGGCAGGCCACAGCGCTGGCCCATTCCCTGTGGCAGATTCACTCCAGGCAGGTGCTTCCCGTCTGTGATCCTACTGTGTCCCTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567707.1
CDS CCA 90 bp GATGTGGTCATCTCTGTCCTCTCAGGGCCTGGGAGCCAGCGGGTCTaGCCGAGTGTTAGGGTGGCTTCCTGGTCTCCTTCCTTAGCAGGG +
Preference number: 5 (lower is better)
Translates to: DVVISVLSGPGSQRV*PSVRVASWSPSLAG
Trigger: CCCTGCTAAGGAAGGAGACCAGGAAGCCACCCTAACACTCGGCCAGACCCGCTGGCTCCCAGGCCCTGAGAGGACAGAGATGACCACATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343939.6
ENST00000361711.7
ENST00000393306.6
CDS CCA 90 bp GAAACCCTGCATGGCTCCAAGTCGCTGCTGAGACGCCGTCGCATCTaGGGGCGGAGGAGACGGGATGTTGAGGACCAAATGGTGGCTTCC +
Preference number: 5 (lower is better)
Translates to: ETLHGSKSLLRRRRI*GRRRRDVEDQMVAS
Trigger: GGAAGCCACCATTTGGTCCTCAACATCCCGTCTCCTCCGCCCCCAGATGCGACGGCGTCTCAGCAGCGACTTGGAGCCATGCAGGGTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563248.2
CDS-3UTR CAA 90 bp CCCACAAATCCCAGGTCTAGGCCAACCCTGGCCTGCGGCCGCTGTTACCACCTCTCGGGGTACAGCATCTaGGGCAGCTGGTTGAACACC +
Preference number: 5 (lower is better)
Translates to: PTNPRSRPTLACGRCYHLSGYSI*GSWLNT
Trigger: GGTGTTCAACCAGCTGCCCAAGATGCTGTACCCCGA...GAGGTGGTAACAGCGGCCGCAGGCCAGGGTTGGCCTAGACCTGGGATTTGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS TCA 90 bp GCTGCTGAGACGCCGTCGCATCTGGGGGCGGAGGAGACGGGATGTTaGGGACCAAATGGTGGCTTCCCAGTGACGTGTCGGGAATCTGTA +
Preference number: 5 (lower is better)
Translates to: AAETPSHLGAEETGC*GPNGGFPVTCRESV
Trigger: TACAGATTCCCGACACGTCACTGGGAAGCCACCATTTGGTCCTCAACATCCCGTCTCCTCCGCCCCCAGATGCGACGGCGTCTCAGCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563248.2
CDS GCA 90 bp AGGTTCCGGCCCAGAACCACGTGGGGGATGGCGTGCTCCTTCCGGTaGTTCCAGGTGAGGACCGACTTCATGTTTCCCCCAAAGTCTGTG +
Preference number: 5 (lower is better)
Translates to: RFRPRTTWGMACSFR*FQVRTDFMFPPKSV
Trigger: CACAGACTTTGGGGGAAACATGAAGTCGGTCCTCACCTGGAAGCACCGGAAGGAGCACGCCATCCCCCACGTGGTTCTGGGCCGGAACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000343939.6
ENST00000361711.7
ENST00000393306.6
ENST00000565123.5
CDS GCA 90 bp CCATTGTGCAGAGGAAGAAAAGCTGGTCAGGAGGAGTGGGCGTCTTaGCCCAGGTCACCTGACAGGCAGTGGTGCAGGAGCCCAGTGAGC +
Preference number: 5 (lower is better)
Translates to: PLCRGRKAGQEEWAS*PRSPDRQWCRSPVS
Trigger: GCTCACTGGGCTCCTGCACCACTGCCTGTCAGGTGACCTGGGGCAAGACGCCCACTCCTCCTGACCAGCTTTTCTTCCTCTGCACAATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563543.1
CDS GCA 90 bp AGGATCATCTTTCCTTCCAGTTTCAGGTCTGGGCTCCAGCACAGCTaGCGGCCCTGTAGAGGTGGGGGAGGCGCATCGAGGAGACAAGGG +
Preference number: 5 (lower is better)
Translates to: RIIFPSSFRSGLQHS*RPCRGGGGASRRQG
Trigger: CCCTTGTCTCCTCGATGCGCCTCCCCCACCTCTACAGGGCCGGCAGCTGTGCTGGAGCCCAGACCTGAAACTGGAAGGAAAGATGATCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563248.2
CDS CCA 90 bp TTCTGCATCCAGTCCTTGACCTCCAGGTCCGGGAGCCCCATCCACTaGCCTTGGCTCAGGATCACCATGGAGCCTTCGATGGAGTGCCAG +
Preference number: 5 (lower is better)
Translates to: FCIQSLTSRSGSPIH*PWLRITMEPSMECQ
Trigger: CTGGCACTCCATCGAAGGCTCCATGGTGATCCTGAGCCAAGGCCAGTGGATGGGGCTCCCGGACCTGGAGGTCAAGGACTGGATGCAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343939.6
ENST00000361711.7
ENST00000393306.6
ENST00000565123.5
CDS CCA 90 bp AGCACCAGGGAGACCCCAAACACCTTCTCGACACCCTCGAGGTCCTaGAACACGGCCTGGCAGTCTTCCTTGAAGCACAGCAGCTGGTGC +
Preference number: 5 (lower is better)
Translates to: STRETPNTFSTPSRS*NTAWQSSLKHSSWC
Trigger: GCACCAGCTGCTGTGCTTCAAGGAAGACTGCCAGGCCGTGTTCCAGGACCTCGAGGGTGTCGAGAAGGTGTTTGGGGTCTCCCTGGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343939.6
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CAA 90 bp CCTGGCTGGGTGCTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCCAGGTATCTTGGGCAGCTGGTaGAACACCAGGCCAGGGTCG +
Preference number: 5 (lower is better)
Translates to: PGWVLSWSHQQLSPQIPGILGSW*NTRPGS
Trigger: CGACCCTGGCCTGGTGTTCAACCAGCTGCCCAAGAT...ACCTGGGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAGCACCCAGCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CAA 90 bp CTCCTGGCTGGGTGCTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCCAGGCCTGGCAGTCTTCCTaGAAGCACAGCAGCTGGTGC +
Preference number: 5 (lower is better)
Translates to: LLAGCSAGHTSSFPHKSQAWQSS*KHSSWC
Trigger: GCACCAGCTGCTGTGCTTCAAGGAAGACTGCCAGGC...CTGGGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAGCACCCAGCCAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS TCA 90 bp CCAGAACCACGTGGGGGATGGCGTGCTCCTTCCGGTGCTTCCAGGTaGGGACCGACTTCATGTTTCCCCCAAAGTCTGTGTCTGGGCGTA +
Preference number: 5 (lower is better)
Translates to: PEPRGGWRAPSGASR*GPTSCFPQSLCLGV
Trigger: TACGCCCAGACACAGACTTTGGGGGAAACATGAAGTCGGTCCTCACCTGGAAGCACCGGAAGGAGCACGCCATCCCCCACGTGGTTCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000343939.6
ENST00000361711.7
ENST00000393306.6
ENST00000565123.5
ENST00000567707.1
CDS TCA 90 bp AGTGAACAACCACAACAGAAACCCTGCATGGCTCCAAGTCGCTGCTaGGACGCCGTCGCATCTGGGGGCGGAGGAGACGGGATGTTGAGG +
Preference number: 5 (lower is better)
Translates to: SEQPQQKPCMAPSRC*DAVASGGGGDGMLR
Trigger: CCTCAACATCCCGTCTCCTCCGCCCCCAGATGCGACGGCGTCTCAGCAGCGACTTGGAGCCATGCAGGGTTTCTGTTGTGGTTGTTCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563248.2
CDS CCA 90 bp CTGGGCGACAGGATGGACTGCTCCCGCATCATCTGGTGCACCTTGTaGTACTCGGGGTACAGCATCTTGGGCAGCTGGTTGAACACCAGG +
Preference number: 5 (lower is better)
Translates to: LGDRMDCSRIIWCTL*YSGYSILGSWLNTR
Trigger: CCTGGTGTTCAACCAGCTGCCCAAGATGCTGTACCCCGAGTACCACAAGGTGCACCAGATGATGCGGGAGCAGTCCATCCTGTCGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343939.6
ENST00000361711.7
ENST00000393306.6
CDS CCA 90 bp CCGTGGCCTTTGTGTGTGCATGGGACCAGGTGTCTCTCCAGGGAGTaGGCCTGTCCAACTTCAAACCTGGCTGGACCTACCACGCCGATA +
Preference number: 5 (lower is better)
Translates to: PWPLCVHGTRCLSRE*ACPTSNLAGPTTPI
Trigger: TATCGGCGTGGTAGGTCCAGCCAGGTTTGAAGTTGGACAGGCCCACTCCCTGGAGAGACACCTGGTCCCATGCACACACAAAGGCCACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563248.2
CDS CCA 90 bp CCCAGGAGCCTCCACCTAACAGGCTCCGTGGCCTTTGTGTGTGCATaGGACCAGGTGTCTCTCCAGGGAGTGGGCCTGTCCAACTTCAAA +
Preference number: 5 (lower is better)
Translates to: PRSLHLTGSVAFVCA*DQVSLQGVGLSNFK
Trigger: TTTGAAGTTGGACAGGCCCACTCCCTGGAGAGACACCTGGTCCCATGCACACACAAAGGCCACGGAGCCTGTTAGGTGGAGGCTCCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563248.2
CDS CCA 90 bp GCCGTCGCATCTGGGGGCGGAGGAGACGGGATGTTGAGGACCAAATaGTGGCTTCCCAGTGACGTGTCGGGAATCTGTAAATGCGGCCTT +
Preference number: 5 (lower is better)
Translates to: AVASGGGGDGMLRTK*WLPSDVSGICKCGL
Trigger: AAGGCCGCATTTACAGATTCCCGACACGTCACTGGGAAGCCACCATTTGGTCCTCAACATCCCGTCTCCTCCGCCCCCAGATGCGACGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563248.2
CDS-3UTR CAA 90 bp CTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCCAGGTCTAGGCCAACCCATCTTGGGCAGCTGGTaGAACACCAGGCCAGGGTCG +
Preference number: 5 (lower is better)
Translates to: LSWSHQQLSPQIPGLGQPILGSW*NTRPGS
Trigger: CGACCCTGGCCTGGTGTTCAACCAGCTGCCCAAGAT...GGGTTGGCCTAGACCTGGGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CAA 90 bp GTCTCCTGGCTGGGTGCTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCCTCGGGGTACAGCATCTaGGGCAGCTGGTTGAACACC +
Preference number: 5 (lower is better)
Translates to: VSWLGAQLVTPAAFPTNPSGYSI*GSWLNT
Trigger: GGTGTTCAACCAGCTGCCCAAGATGCTGTACCCCGA...GGGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAGCACCCAGCCAGGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CAA 90 bp GGTCTAGGCCAACCCTGGCCTGCGGCCGCTGTTACCACCTCAGACACTGGTCTAATCATCTGGTGCACCTaGTGGTACTCGGGGTACAGC +
Preference number: 5 (lower is better)
Translates to: GLGQPWPAAAVTTSDTGLIIWCT*WYSGYS
Trigger: GCTGTACCCCGAGTACCACAAGGTGCACCAGATGAT...TAGACCAGTGTCTGAGGTGGTAACAGCGGCCGCAGGCCAGGGTTGGCCTAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CAA 90 bp ACACCAGCAGCTTTCCCCACAAATCCCAGGTCTAGGCCAACCCTGGCCTGCGGCCTGGCAGCGGACCTCTaGTCTGCACTGCATATTTCC +
Preference number: 5 (lower is better)
Translates to: TPAAFPTNPRSRPTLACGLAADL*SALHIS
Trigger: GGAAATATGCAGTGCAGACAAGAGGTCCGCTGCCAG...GCCGCAGGCCAGGGTTGGCCTAGACCTGGGATTTGTGGGGAAAGCTGCTGGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361711.7
CDS CCA 90 bp CAGGTGTCTCTCCAGGGAGTGGGCCTGTCCAACTTCAAACCTGGCTaGACCTACCACGCCGATAAGTCCCAGCACGTGTTCCCACACTCA +
Preference number: 5 (lower is better)
Translates to: QVSLQGVGLSNFKPG*TYHADKSQHVFPHS
Trigger: TGAGTGTGGGAACACGTGCTGGGACTTATCGGCGTGGTAGGTCCAGCCAGGTTTGAAGTTGGACAGGCCCACTCCCTGGAGAGACACCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563248.2
CDS CCA 90 bp TTCCAACCCCCTCCGCTCCCGAAGGAACATGAAGTGGCGTGGGAGTaGGGAGTGTGTCATCCACTGTCGGTAAGAGCAGGAAGCTTACCC +
Preference number: 5 (lower is better)
Translates to: FQPPPLPKEHEVAWE*GVCHPLSVRAGSLP
Trigger: GGGTAAGCTTCCTGCTCTTACCGACAGTGGATGACACACTCCCCACTCCCACGCCACTTCATGTTCCTTCGGGAGCGGAGGGGGTTGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563248.2
CDS-3UTR CAA 90 bp GACTTCCTGAGGCTGTCACGGGCGCGTCCTCAACCTTGGAAAAATAAACTTTCTCAGGGCCACGGGGCTTaGGGATCGGCCTTCGAGGCC +
Preference number: 5 (lower is better)
Translates to: DFLRLSRARPQPWKNKLSQGHGA*GSAFEA
Trigger: GGCCTCGAAGGCCGATCCCAAAGCCCCGTGGCCCTG...AGAAAGTTTATTTTTCCAAGGTTGAGGACGCGCCCGTGACAGCCTCAGGAAGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565123.5
CDS-3UTR CAA 90 bp TCACACCAGCAGCTTTCCCCACAAATCCCAGGTCTAGGCCAACCCTGGCCTGCGATCATCTGGTGCACCTaGTGGTACTCGGGGTACAGC +
Preference number: 5 (lower is better)
Translates to: SHQQLSPQIPGLGQPWPAIIWCT*WYSGYS
Trigger: GCTGTACCCCGAGTACCACAAGGTGCACCAGATGAT...CGCAGGCCAGGGTTGGCCTAGACCTGGGATTTGTGGGGAAAGCTGCTGGTGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS GCA 90 bp ATGTTTAAAATGGGAAAGAGACGGCACGGGAGGAGAGTGACACCATaGTCACGCAGGGCGAGCGTGCGCCAAGGCCATGCTGCTCCTACA +
Preference number: 5 (lower is better)
Translates to: MFKMGKRRHGRRVTP*SRRASVRQGHAAPT
Trigger: TGTAGGAGCAGCATGGCCTTGGCGCACGCTCGCCCTGCGTGAGCATGGTGTCACTCTCCTCCCGTGCCGTCTCTTTCCCATTTTAAACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563248.2
CDS CCA 90 bp TCTCATGGGCAGCCATGGGTTGTAGTGGAACAGTCTGGAGAGATCTaGGTTCAAACCGCAGCCCCGCCTTTCCTTGTGGGATCCTGGAGG +
Preference number: 5 (lower is better)
Translates to: SHGQPWVVVEQSGEI*VQTAAPPFLVGSWR
Trigger: CCTCCAGGATCCCACAAGGAAAGGCGGGGCTGCGGTTTGAACCCAGATCTCTCCAGACTGTTCCACTACAACCCATGGCTGCCCATGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563248.2
CDS CCA 90 bp GCCTGCCACCGTAGGAAGGACCAGGACACGTTTGGGGGTTACTCCTaGGCAAAGACTCCAAAACCAAGTGTGAGTCTGGAGTGCTGGGAG +
Preference number: 5 (lower is better)
Translates to: ACHRRKDQDTFGGYS*AKTPKPSVSLECWE
Trigger: CTCCCAGCACTCCAGACTCACACTTGGTTTTGGAGTCTTTGCCCAGGAGTAACCCCCAAACGTGTCCTGGTCCTTCCTACGGTGGCAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563248.2
CDS CCA 90 bp GTCGCATCTGGGGGCGGAGGAGACGGGATGTTGAGGACCAAATGGTaGCTTCCCAGTGACGTGTCGGGAATCTGTAAATGCGGCCTTGAT +
Preference number: 5 (lower is better)
Translates to: VASGGGGDGMLRTKW*LPSDVSGICKCGLD
Trigger: ATCAAGGCCGCATTTACAGATTCCCGACACGTCACTGGGAAGCCACCATTTGGTCCTCAACATCCCGTCTCCTCCGCCCCCAGATGCGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563248.2
CDS-3UTR CAA 90 bp GCTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCCAGGTCTAGGCCAACCGGGCACTGGCTTTATTaGGGACCTGCTTCTGGAAGG +
Preference number: 5 (lower is better)
Translates to: AQLVTPAAFPTNPRSRPTGHWLY*GPASGR
Trigger: CCTTCCAGAAGCAGGTCCCAAATAAAGCCAGTGCCC...GGTTGGCCTAGACCTGGGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS-3UTR CAA 90 bp CTGGGTGCTCAGCTGGTCACACCAGCAGCTTTCCCCACAAATCCCAGGTCTAGGGGGCACTGGCTTTATTaGGGACCTGCTTCTGGAAGG +
Preference number: 5 (lower is better)
Translates to: LGAQLVTPAAFPTNPRSRGHWLY*GPASGR
Trigger: CCTTCCAGAAGCAGGTCCCAAATAAAGCCAGTGCCC...CCTAGACCTGGGATTTGTGGGGAAAGCTGCTGGTGTGACCAGCTGAGCACCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361711.7
ENST00000393306.6
CDS CCA 90 bp CCGGAGGCGAAGTCTCACAAAATGAAGGGAACAAGGGTGGCAGTGTaGCTGTACTTGATCTCATCTGCCCTTGGCTGTGACCCTGGAGCC +
Preference number: 5 (lower is better)
Translates to: PEAKSHKMKGTRVAV*LYLISSALGCDPGA
Trigger: GGCTCCAGGGTCACAGCCAAGGGCAGATGAGATCAAGTACAGCCACACTGCCACCCTTGTTCCCTTCATTTTGTGAGACTTCGCCTCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563248.2
CDS TCA 90 bp AAGGGTGGCAGTGTGGCTGTACTTGATCTCATCTGCCCTTGGCTGTaGCCCTGGAGCCCCAGAAGCCTTTGCTGTCAACCTTGGAGATGT +
Preference number: 5 (lower is better)
Translates to: KGGSVAVLDLICPWL*PWSPRSLCCQPWRC
Trigger: ACATCTCCAAGGTTGACAGCAAAGGCTTCTGGGGCTCCAGGGTCACAGCCAAGGGCAGATGAGATCAAGTACAGCCACACTGCCACCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563248.2
CDS TCA 90 bp GGAGTGTGTCATCCACTGTCGGTAAGAGCAGGAAGCTTACCCAAGTaGACAACCACAACAGAAACCCTGCATGGCTCCAAGTCGCTGCTG +
Preference number: 5 (lower is better)
Translates to: GVCHPLSVRAGSLPK*TTTTETLHGSKSLL
Trigger: CAGCAGCGACTTGGAGCCATGCAGGGTTTCTGTTGTGGTTGTTCACTTGGGTAAGCTTCCTGCTCTTACCGACAGTGGATGACACACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563248.2
CDS CCA 90 bp GGAACTGGGTTTCGGTGTTGTCCAAAGCTTTCCAGGTGGTTCTCATaGGCAGCCATGGGTTGTAGTGGAACAGTCTGGAGAGATCTGGGT +
Preference number: 5 (lower is better)
Translates to: GTGFRCCPKLSRWFS*AAMGCSGTVWRDLG
Trigger: ACCCAGATCTCTCCAGACTGTTCCACTACAACCCATGGCTGCCCATGAGAACCACCTGGAAAGCTTTGGACAACACCGAAACCCAGTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563248.2
CDS-3UTR CAA 90 bp AGGCCAACCCTGGCCTGCGGCCGCTGTTACCACCTCAGACACTGGTCTAAGTCCCTAGAATTTGAAGATTaGCTGATATGGGGAACTGTG +
Preference number: 5 (lower is better)
Translates to: RPTLACGRCYHLRHWSKSLEFED*LIWGTV
Trigger: CACAGTTCCCCATATCAGCAAATCTTCAAATTCTAG...GGACTTAGACCAGTGTCTGAGGTGGTAACAGCGGCCGCAGGCCAGGGTTGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361711.7
CDS CCA 90 bp TTCGGTGTTGTCCAAAGCTTTCCAGGTGGTTCTCATGGGCAGCCATaGGTTGTAGTGGAACAGTCTGGAGAGATCTGGGTTCAAACCGCA +
Preference number: 5 (lower is better)
Translates to: FGVVQSFPGGSHGQP*VVVEQSGEIWVQTA
Trigger: TGCGGTTTGAACCCAGATCTCTCCAGACTGTTCCACTACAACCCATGGCTGCCCATGAGAACCACCTGGAAAGCTTTGGACAACACCGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563248.2
CDS CCA 90 bp CCTGCTGACCCTGACCTTGTTCTAGAATTTGAAGATTTGCTGATATaGGGAACTGTGGGGCGAGACGTGGACTTTCCTCCCTGCCATCTT +
Preference number: 5 (lower is better)
Translates to: PADPDLVLEFEDLLI*GTVGRDVDFPPCHL
Trigger: AAGATGGCAGGGAGGAAAGTCCACGTCTCGCCCCACAGTTCCCCATATCAGCAAATCTTCAAATTCTAGAACAAGGTCAGGGTCAGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343939.6
ENST00000361711.7
CDS GCA 90 bp AGGACCAAATGGTGGCTTCCCAGTGACGTGTCGGGAATCTGTAAATaGGGCCTTGATTGGAAAAGGGGTCTTTACAGAATTCATTCAGTT +
Preference number: 5 (lower is better)
Translates to: RTKWWLPSDVSGICK*GLDWKRGLYRIHSV
Trigger: AACTGAATGAATTCTGTAAAGACCCCTTTTCCAATCAAGGCCGCATTTACAGATTCCCGACACGTCACTGGGAAGCCACCATTTGGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563248.2
CDS CCA 90 bp TGGCTTCCCAGTGACGTGTCGGGAATCTGTAAATGCGGCCTTGATTaGAAAAGGGGTCTTTACAGAATTCATTCAGTTAGGGATCTTCGA +
Preference number: 5 (lower is better)
Translates to: WLPSDVSGICKCGLD*KRGLYRIHSVRDLR
Trigger: TCGAAGATCCCTAACTGAATGAATTCTGTAAAGACCCCTTTTCCAATCAAGGCCGCATTTACAGATTCCCGACACGTCACTGGGAAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563248.2
CDS CCA 90 bp GATGATGAGAGGGTACATTTCTGTTGCTTTAAGCCACTTAGTTTGTaGTCACTGGTGATGTCAGGTACAGGAAACTCATTCAGGAGGAAT +
Preference number: 5 (lower is better)
Translates to: DDERVHFCCFKPLSL*SLVMSGTGNSFRRN
Trigger: ATTCCTCCTGAATGAGTTTCCTGTACCTGACATCACCAGTGACCACAAACTAAGTGGCTTAAAGCAACAGAAATGTACCCTCTCATCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563248.2
CDS TCA 90 bp AAAGGCAAACAGGATAAAAGAAATGAAAACAGTTGCACCTTCGACTaGCGTTTCTTTCAAGTGTGCGGCATTTGTACTTCTGAGGTTGTT +
Preference number: 5 (lower is better)
Translates to: KGKQDKRNENSCTFD*RFFQVCGICTSEVV
Trigger: AACAACCTCAGAAGTACAAATGCCGCACACTTGAAAGAAACGTCAGTCGAAGGTGCAACTGTTTTCATTTCTTTTATCCTGTTTGCCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563543.1
CDS GCA 72 bp CCCCGGGGATGCCCAGCCGGGCCGGGCTGTCGAACGTaGCTGTGGCGAGGACCACGTTGCGGGCCCACAGCG +
Preference number: 6 (lower is better)
Translates to: PRGCPAGPGCRT*LWRGPRCGPTA
Trigger: CGCTGTGGGCCCGCAACGTGGTCCTCGCCACAGGCACGTTCGACAGCCCGGCCCGGCTGGGCATCCCCGGGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343939.6
ENST00000361711.7
ENST00000393306.6
CDS CAA 90 bp CCCAGCCGGGCCGGGCTGTCGAACGTGCCTGTGGCGAGGACCACGTaGCGGGCCCACAGCGAGAAGGGCTGCTGGGCCTGGTTCCTGGTC +
Preference number: 6 (lower is better)
Translates to: PSRAGLSNVPVARTT*RAHSEKGCWAWFLV
Trigger: GACCAGGAACCAGGCCCAGCAGCCCTTCTCGCTGTGGGCCCGCAACGTGGTCCTCGCCACAGGCACGTTCGACAGCCCGGCCCGGCTGGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343939.6
ENST00000361711.7
ENST00000393306.6
CDS CCA 72 bp GGATGCCCAGCCGGGCCGGGCTGTCGAACGTGCCTGTaGCGAGGACCACGTTGCGGGCCCACAGCGAGAAGG +
Preference number: 6 (lower is better)
Translates to: GCPAGPGCRTCL*RGPRCGPTARR
Trigger: CCTTCTCGCTGTGGGCCCGCAACGTGGTCCTCGCCACAGGCACGTTCGACAGCCCGGCCCGGCTGGGCATCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343939.6
ENST00000361711.7
ENST00000393306.6
CDS CAA 72 bp GCCGGGCTGTCGAACGTGCCTGTGGCGAGGACCACGTaGCGGGCCCACAGCGAGAAGGGCTGCTGGGCCTGG +
Preference number: 6 (lower is better)
Translates to: AGLSNVPVARTT*RAHSEKGCWAW
Trigger: CCAGGCCCAGCAGCCCTTCTCGCTGTGGGCCCGCAACGTGGTCCTCGCCACAGGCACGTTCGACAGCCCGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343939.6
ENST00000361711.7
ENST00000393306.6
CDS GCA 72 bp GCGAGGACCACGTTGCGGGCCCACAGCGAGAAGGGCTaGTGGGCCTGGTTCCTGGTCAGGAAGCCGCTCACC +
Preference number: 6 (lower is better)
Translates to: ARTTLRAHSEKG*WAWFLVRKPLT
Trigger: GGTGAGCGGCTTCCTGACCAGGAACCAGGCCCAGCAGCCCTTCTCGCTGTGGGCCCGCAACGTGGTCCTCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343939.6
ENST00000361711.7
ENST00000393306.6
CDS CCA 72 bp GGGCCCACAGCGAGAAGGGCTGCTGGGCCTGGTTCCTaGTCAGGAAGCCGCTCACCTGGAAGAGGGGGCTGG +
Preference number: 6 (lower is better)
Translates to: GPTARRAAGPGS*SGSRSPGRGGW
Trigger: CCAGCCCCCTCTTCCAGGTGAGCGGCTTCCTGACCAGGAACCAGGCCCAGCAGCCCTTCTCGCTGTGGGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343939.6
ENST00000361711.7
ENST00000393306.6
CDS CAA 72 bp GGACAGGGTCTGAGGCCGGGGTCACCGCACCCACCCTaGTGGCGGCCTCCAGGGCAGACAGCTCATGGTGGA +
Preference number: 6 (lower is better)
Translates to: GQGLRPGSPHPP*WRPPGQTAHGG
Trigger: TCCACCATGAGCTGTCTGCCCTGGAGGCCGCCACAAGGGTGGGTGCGGTGACCCCGGCCTCAGACCCTGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343939.6
ENST00000361711.7
ENST00000393306.6
CDS CCA 72 bp AGGACCACGTTGCGGGCCCACAGCGAGAAGGGCTGCTaGGCCTGGTTCCTGGTCAGGAAGCCGCTCACCTGG +
Preference number: 6 (lower is better)
Translates to: RTTLRAHSEKGC*AWFLVRKPLTW
Trigger: CCAGGTGAGCGGCTTCCTGACCAGGAACCAGGCCCAGCAGCCCTTCTCGCTGTGGGCCCGCAACGTGGTCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343939.6
ENST00000361711.7
ENST00000393306.6
CDS CCA 72 bp CAAACCTCACGAAGTTGTCCCCGGCCAGCGGCCCCATaGCGTACAGGCCCTCCTGGCGGGTGCTCTGGTAGG +
Preference number: 6 (lower is better)
Translates to: QTSRSCPRPAAP*RTGPPGGCSGR
Trigger: CCTACCAGAGCACCCGCCAGGAGGGCCTGTACGCCATGGGGCCGCTGGCCGGGGACAACTTCGTGAGGTTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343939.6
ENST00000361711.7
ENST00000393306.6
CDS CAA 72 bp GGGCCGGGTGCAGCAGAGGTGACAGAGGTGACCAGTTaGGCCGGGGAGGAGTGGACACACTGGGGTTGGCCC +
Preference number: 6 (lower is better)
Translates to: GPGAAEVTEVTS*AGEEWTHWGWP
Trigger: GGGCCAACCCCAGTGTGTCCACTCCTCCCCGGCCAAACTGGTCACCTCTGTCACCTCTGCTGCACCCGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566667.2
CDS CAA 90 bp GGCGTTCCGGGGCGGCCTCACCTTCGCTTCTTCTGCATCCAGTCCTaGACCTCCAGGTCCGGGAGCCCCATCCACTGGCCTTGGCTCAGG +
Preference number: 6 (lower is better)
Translates to: GVPGRPHLRFFCIQS*TSRSGSPIHWPWLR
Trigger: CCTGAGCCAAGGCCAGTGGATGGGGCTCCCGGACCTGGAGGTCAAGGACTGGATGCAGAAGAAGCGAAGGTGAGGCCGCCCCGGAACGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565123.5
CDS TCA 72 bp GCAGCGGACCTGACAGGCAGTGGTGCAGGAGCCCAGTaGGCCCGGCCAAGTTGTGCACTAGGAGGGTCAGGG +
Preference number: 6 (lower is better)
Translates to: AADLTGSGAGAQ*ARPSCALGGSG
Trigger: CCCTGACCCTCCTAGTGCACAACTTGGCCGGGCTCACTGGGCTCCTGCACCACTGCCTGTCAGGTCCGCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393306.6
ENST00000565123.5
ENST00000566667.2
CDS GCA 72 bp GGGAGGTTCCGGCCCAGAACCACGTGGGGGATGGCGTaGTCCTTCCGGTGCTTCCAGGTGAGGACCGACTTC +
Preference number: 6 (lower is better)
Translates to: GRFRPRTTWGMA*SFRCFQVRTDF
Trigger: GAAGTCGGTCCTCACCTGGAAGCACCGGAAGGAGCACGCCATCCCCCACGTGGTTCTGGGCCGGAACCTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343939.6
ENST00000361711.7
ENST00000393306.6
ENST00000565123.5
CDS GCA 72 bp ACCATGCTCACGCAGGGCGAGCGTGCGCCAAGGCCATaGTGCTCCTACAGAAGGCGCAGGAAACGGTGGCCC +
Preference number: 6 (lower is better)
Translates to: TMLTQGERAPRP*CSYRRRRKRWP
Trigger: GGGCCACCGTTTCCTGCGCCTTCTGTAGGAGCAGCATGGCCTTGGCGCACGCTCGCCCTGCGTGAGCATGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563248.2
CDS GCA 72 bp CAAGGCGTTCCGGGGCGGCCTCACCTTCGCTTCTTCTaGATCCAGTCCTTGACCTCCAGGTCCGGGAGCCCC +
Preference number: 6 (lower is better)
Translates to: QGVPGRPHLRFF*IQSLTSRSGSP
Trigger: GGGGCTCCCGGACCTGGAGGTCAAGGACTGGATGCAGAAGAAGCGAAGGTGAGGCCGCCCCGGAACGCCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565123.5
CDS CCA 72 bp GGCCCAAGTGCAGAGGCTCCGGCACACAGTGGAGCGTaGGGACCGTTTCTGGAGCACTCATCGCTCCCCACC +
Preference number: 6 (lower is better)
Translates to: GPSAEAPAHSGA*GPFLEHSSLPT
Trigger: GGTGGGGAGCGATGAGTGCTCCAGAAACGGTCCCCACGCTCCACTGTGTGCCGGAGCCTCTGCACTTGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563248.2
CDS TCA 72 bp TGGCGTACAGGCCCTCCTGGCGGGTGCTCTGGTAGGTaGAGGGGTCCACGTCAATGGGGTTCCTCTTGGCGC +
Preference number: 6 (lower is better)
Translates to: WRTGPPGGCSGR*RGPRQWGSSWR
Trigger: GCGCCAAGAGGAACCCCATTGACGTGGACCCCTTCACCTACCAGAGCACCCGCCAGGAGGGCCTGTACGCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343939.6
ENST00000361711.7
ENST00000393306.6
CDS TCA 72 bp CCACAACAGAAACCCTGCATGGCTCCAAGTCGCTGCTaGGACGCCGTCGCATCTGGGGGCGGAGGAGACGGG +
Preference number: 6 (lower is better)
Translates to: PQQKPCMAPSRC*DAVASGGGGDG
Trigger: CCCGTCTCCTCCGCCCCCAGATGCGACGGCGTCTCAGCAGCGACTTGGAGCCATGCAGGGTTTCTGTTGTGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563248.2
CDS GCA 72 bp TGCTCCTACAGAAGGCGCAGGAAACGGTGGCCCAAGTaGAGAGGCTCCGGCACACAGTGGAGCGTGGGGACC +
Preference number: 6 (lower is better)
Translates to: CSYRRRRKRWPK*RGSGTQWSVGT
Trigger: GGTCCCCACGCTCCACTGTGTGCCGGAGCCTCTGCACTTGGGCCACCGTTTCCTGCGCCTTCTGTAGGAGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563248.2
CDS GCA 72 bp ATGCTCACGCAGGGCGAGCGTGCGCCAAGGCCATGCTaGTCCTACAGAAGGCGCAGGAAACGGTGGCCCAAG +
Preference number: 6 (lower is better)
Translates to: MLTQGERAPRPC*SYRRRRKRWPK
Trigger: CTTGGGCCACCGTTTCCTGCGCCTTCTGTAGGAGCAGCATGGCCTTGGCGCACGCTCGCCCTGCGTGAGCAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563248.2
CDS GCA 72 bp TCGCTCGGCGCCTCTTCCCTCCCCAAGCTGGGCACCTaGTGCTACCCTGGTGGAACATTCTGGGCCTCGTGT +
Preference number: 6 (lower is better)
Translates to: SLGASSLPKLGT*CYPGGTFWASC
Trigger: ACACGAGGCCCAGAATGTTCCACCAGGGTAGCAGCAGGTGCCCAGCTTGGGGAGGGAAGAGGCGCCGAGCGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563248.2
CDS CAA 90 bp TGGTGCACCTTGTGGTACTCGGGGTACAGCATCTTGGGCAGCTGGTaGAACACCAGGCCAGGGTCGTCCACGGCCCGGCGGAAGGCATGG +
Preference number: 6 (lower is better)
Translates to: WCTLWYSGYSILGSW*NTRPGSSTARRKAW
Trigger: CCATGCCTTCCGCCGGGCCGTGGACGACCCTGGCCTGGTGTTCAACCAGCTGCCCAAGATGCTGTACCCCGAGTACCACAAGGTGCACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343939.6
ENST00000361711.7
ENST00000393306.6
CDS CAA 90 bp GGACCTGACAGGCAGTGGTGCAGGAGCCCAGTGAGCCCGGCCAAGTaGTGCACTAGGAGGGTCAGGGGAACACGGATCACAGAGTCCCCC +
Preference number: 6 (lower is better)
Translates to: GPDRQWCRSPVSPAK*CTRRVRGTRITESP
Trigger: GGGGGACTCTGTGATCCGTGTTCCCCTGACCCTCCTAGTGCACAACTTGGCCGGGCTCACTGGGCTCCTGCACCACTGCCTGTCAGGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393306.6
ENST00000565123.5
ENST00000566667.2
CDS TCA 72 bp ACGCCGTCGCATCTGGGGGCGGAGGAGACGGGATGTTaGGGACCAAATGGTGGCTTCCCAGTGACGTGTCGG +
Preference number: 6 (lower is better)
Translates to: TPSHLGAEETGC*GPNGGFPVTCR
Trigger: CCGACACGTCACTGGGAAGCCACCATTTGGTCCTCAACATCCCGTCTCCTCCGCCCCCAGATGCGACGGCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563248.2
CDS TCA 72 bp GGCGGCCTCACCTTCGCTTCTTCTGCATCCAGTCCTTaGCCTCCAGGTCCGGGAGCCCCATCCACTGGCCTT +
Preference number: 6 (lower is better)
Translates to: GGLTFASSASSP*PPGPGAPSTGL
Trigger: AAGGCCAGTGGATGGGGCTCCCGGACCTGGAGGTCAAGGACTGGATGCAGAAGAAGCGAAGGTGAGGCCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565123.5
CDS GCA 72 bp ATGGGAAAGAGACGGCACGGGAGGAGAGTGACACCATaGTCACGCAGGGCGAGCGTGCGCCAAGGCCATGCT +
Preference number: 6 (lower is better)
Translates to: MGKRRHGRRVTP*SRRASVRQGHA
Trigger: AGCATGGCCTTGGCGCACGCTCGCCCTGCGTGAGCATGGTGTCACTCTCCTCCCGTGCCGTCTCTTTCCCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563248.2
CDS CCA 72 bp CCCCTGAAGCCGGAGGAGTCAACGAAGATCCTTCCCTaGAAGCTCCAGAGGGCGGGGGTCCTGCTGATGCCT +
Preference number: 6 (lower is better)
Translates to: PLKPEESTKILP*KLQRAGVLLMP
Trigger: AGGCATCAGCAGGACCCCCGCCCTCTGGAGCTTCCAGGGAAGGATCTTCGTTGACTCCTCCGGCTTCAGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563248.2
CDS CAA 72 bp GACGCCGTCGCATCTGGGGGCGGAGGAGACGGGATGTaGAGGACCAAATGGTGGCTTCCCAGTGACGTGTCG +
Preference number: 6 (lower is better)
Translates to: DAVASGGGGDGM*RTKWWLPSDVS
Trigger: CGACACGTCACTGGGAAGCCACCATTTGGTCCTCAACATCCCGTCTCCTCCGCCCCCAGATGCGACGGCGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563248.2
CDS CAA 90 bp CATCCAGTCCTTGACCTCCAGGTCCGGGAGCCCCATCCACTGGCCTaGGCTCAGGATCACCATGGAGCCTTCGATGGAGTGCCAGGCTCC +
Preference number: 6 (lower is better)
Translates to: HPVLDLQVREPHPLA*AQDHHGAFDGVPGS
Trigger: GGAGCCTGGCACTCCATCGAAGGCTCCATGGTGATCCTGAGCCAAGGCCAGTGGATGGGGCTCCCGGACCTGGAGGTCAAGGACTGGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343939.6
ENST00000361711.7
ENST00000393306.6
ENST00000565123.5
CDS CAA 90 bp GCCCGGCTGTTGCGAAGACCTCTTCGCTTCTTCTGCATCCAGTCCTaGACCTCCAGGTCCGGGAGCCCCATCCACTGGCCTTGGCTCAGG +
Preference number: 6 (lower is better)
Translates to: ARLLRRPLRFFCIQS*TSRSGSPIHWPWLR
Trigger: CCTGAGCCAAGGCCAGTGGATGGGGCTCCCGGACCTGGAGGTCAAGGACTGGATGCAGAAGAAGCGAAGAGGTCTTCGCAACAGCCGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343939.6
ENST00000361711.7
ENST00000393306.6
CDS CAA 90 bp TCCCGCATCATCTGGTGCACCTTGTGGTACTCGGGGTACAGCATCTaGGGCAGCTGGTTGAACACCAGGCCAGGGTCGTCCACGGCCCGG +
Preference number: 6 (lower is better)
Translates to: SRIIWCTLWYSGYSI*GSWLNTRPGSSTAR
Trigger: CCGGGCCGTGGACGACCCTGGCCTGGTGTTCAACCAGCTGCCCAAGATGCTGTACCCCGAGTACCACAAGGTGCACCAGATGATGCGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343939.6
ENST00000361711.7
ENST00000393306.6
CDS CAA 90 bp TCACCTGACAGGCAGTGGTGCAGGAGCCCAGTGAGCCCGGCCAAGTaGTGCACTAGGAGGGTCAGGGGAACACGGATCACAGAGTCCCCC +
Preference number: 6 (lower is better)
Translates to: SPDRQWCRSPVSPAK*CTRRVRGTRITESP
Trigger: GGGGGACTCTGTGATCCGTGTTCCCCTGACCCTCCTAGTGCACAACTTGGCCGGGCTCACTGGGCTCCTGCACCACTGCCTGTCAGGTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563543.1
CDS GCA 72 bp CCCAGAACCACGTGGGGGATGGCGTGCTCCTTCCGGTaGTTCCAGGTGAGGACCGACTTCATGTTTCCCCCA +
Preference number: 6 (lower is better)
Translates to: PRTTWGMACSFR*FQVRTDFMFPP
Trigger: TGGGGGAAACATGAAGTCGGTCCTCACCTGGAAGCACCGGAAGGAGCACGCCATCCCCCACGTGGTTCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000343939.6
ENST00000361711.7
ENST00000393306.6
ENST00000565123.5
ENST00000567707.1
CDS GCA 72 bp CAGTGGTGCAGGAGCCCAGTGAGCCCGGCCAAGTTGTaGACTAGGAGGGTCAGGGGAACACGGATCACAGAG +
Preference number: 6 (lower is better)
Translates to: QWCRSPVSPAKL*TRRVRGTRITE
Trigger: CTCTGTGATCCGTGTTCCCCTGACCCTCCTAGTGCACAACTTGGCCGGGCTCACTGGGCTCCTGCACCACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393306.6
ENST00000563543.1
ENST00000565123.5
ENST00000566667.2
CDS CCA 72 bp TTGACCTCCAGGTCCGGGAGCCCCATCCACTGGCCTTaGCTCAGGATCACCATGGAGCCTTCGATGGAGTGC +
Preference number: 6 (lower is better)
Translates to: LTSRSGSPIHWP*LRITMEPSMEC
Trigger: GCACTCCATCGAAGGCTCCATGGTGATCCTGAGCCAAGGCCAGTGGATGGGGCTCCCGGACCTGGAGGTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343939.6
ENST00000361711.7
ENST00000393306.6
ENST00000565123.5
CDS CCA 72 bp GGCTGCGGTAACCCTCATAGGGGCTGGGCGACAGGATaGACTGCTCCCGCATCATCTGGTGCACCTTGTGGT +
Preference number: 6 (lower is better)
Translates to: GCGNPHRGWATG*TAPASSGAPCG
Trigger: ACCACAAGGTGCACCAGATGATGCGGGAGCAGTCCATCCTGTCGCCCAGCCCCTATGAGGGTTACCGCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343939.6
ENST00000361711.7
ENST00000393306.6
CDS CCA 72 bp AAACGGTGGCCCAAGTGCAGAGGCTCCGGCACACAGTaGAGCGTGGGGACCGTTTCTGGAGCACTCATCGCT +
Preference number: 6 (lower is better)
Translates to: KRWPKCRGSGTQ*SVGTVSGALIA
Trigger: AGCGATGAGTGCTCCAGAAACGGTCCCCACGCTCCACTGTGTGCCGGAGCCTCTGCACTTGGGCCACCGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563248.2
CDS CCA 72 bp CATGGCTCCAAGTCGCTGCTGAGACGCCGTCGCATCTaGGGGCGGAGGAGACGGGATGTTGAGGACCAAATG +
Preference number: 6 (lower is better)
Translates to: HGSKSLLRRRRI*GRRRRDVEDQM
Trigger: CATTTGGTCCTCAACATCCCGTCTCCTCCGCCCCCAGATGCGACGGCGTCTCAGCAGCGACTTGGAGCCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563248.2
CDS CCA 72 bp TGGAGTGAATCTGCCACAGGGAATGGGCCAGCGCTGTaGCCTGCCCCAGGAGCTGGGATGGACTTGGGGAAA +
Preference number: 6 (lower is better)
Translates to: WSESATGNGPAL*PAPGAGMDLGK
Trigger: TTTCCCCAAGTCCATCCCAGCTCCTGGGGCAGGCCACAGCGCTGGCCCATTCCCTGTGGCAGATTCACTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567707.1
CDS CAA 72 bp CTTGACCTCCAGGTCCGGGAGCCCCATCCACTGGCCTaGGCTCAGGATCACCATGGAGCCTTCGATGGAGTG +
Preference number: 6 (lower is better)
Translates to: LDLQVREPHPLA*AQDHHGAFDGV
Trigger: CACTCCATCGAAGGCTCCATGGTGATCCTGAGCCAAGGCCAGTGGATGGGGCTCCCGGACCTGGAGGTCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343939.6
ENST00000361711.7
ENST00000393306.6
ENST00000565123.5
CDS CAA 72 bp AGGCAGTGGTGCAGGAGCCCAGTGAGCCCGGCCAAGTaGTGCACTAGGAGGGTCAGGGGAACACGGATCACA +
Preference number: 6 (lower is better)
Translates to: RQWCRSPVSPAK*CTRRVRGTRIT
Trigger: TGTGATCCGTGTTCCCCTGACCCTCCTAGTGCACAACTTGGCCGGGCTCACTGGGCTCCTGCACCACTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393306.6
ENST00000563543.1
ENST00000565123.5
ENST00000566667.2
CDS TCA 72 bp CCGATAAGTCCCAGCACGTGTTCCCACACTCAGAGCTaGGGGTTCCCCAGTGCCTGCCACCGTAGGAAGGAC +
Preference number: 6 (lower is better)
Translates to: PISPSTCSHTQS*GFPSACHRRKD
Trigger: GTCCTTCCTACGGTGGCAGGCACTGGGGAACCCTCAGCTCTGAGTGTGGGAACACGTGCTGGGACTTATCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563248.2
CDS GCA 72 bp CTGGGCGACAGGATGGACTGCTCCCGCATCATCTGGTaGACCTTGTGGTACTCGGGGTACAGCATCTTGGGC +
Preference number: 6 (lower is better)
Translates to: LGDRMDCSRIIW*TLWYSGYSILG
Trigger: GCCCAAGATGCTGTACCCCGAGTACCACAAGGTGCACCAGATGATGCGGGAGCAGTCCATCCTGTCGCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343939.6
ENST00000361711.7
ENST00000393306.6
CDS CCA 72 bp CGTAGTCCCTGTAGTAGTGGGCGATGTCCCCGGCAGTaGCCCGGCTGTTGCGAAGACCTCTTCGCTTCTTCT +
Preference number: 6 (lower is better)
Translates to: RSPCSSGRCPRQ*PGCCEDLFASS
Trigger: AGAAGAAGCGAAGAGGTCTTCGCAACAGCCGGGCCACTGCCGGGGACATCGCCCACTACTACAGGGACTACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343939.6
ENST00000361711.7
ENST00000393306.6
CDS CCA 72 bp GGGCTGGGCGACAGGATGGACTGCTCCCGCATCATCTaGTGCACCTTGTGGTACTCGGGGTACAGCATCTTG +
Preference number: 6 (lower is better)
Translates to: GLGDRMDCSRII*CTLWYSGYSIL
Trigger: CAAGATGCTGTACCCCGAGTACCACAAGGTGCACCAGATGATGCGGGAGCAGTCCATCCTGTCGCCCAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343939.6
ENST00000361711.7
ENST00000393306.6
CDS TCA 72 bp CGTGGGGGATGGCGTGCTCCTTCCGGTGCTTCCAGGTaGGGACCGACTTCATGTTTCCCCCAAAGTCTGTGT +
Preference number: 6 (lower is better)
Translates to: RGGWRAPSGASR*GPTSCFPQSLC
Trigger: ACACAGACTTTGGGGGAAACATGAAGTCGGTCCTCACCTGGAAGCACCGGAAGGAGCACGCCATCCCCCACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000343939.6
ENST00000361711.7
ENST00000393306.6
ENST00000565123.5
ENST00000567707.1
CDS TCA 72 bp TGCGAAGACCTCTTCGCTTCTTCTGCATCCAGTCCTTaGCCTCCAGGTCCGGGAGCCCCATCCACTGGCCTT +
Preference number: 6 (lower is better)
Translates to: CEDLFASSASSP*PPGPGAPSTGL
Trigger: AAGGCCAGTGGATGGGGCTCCCGGACCTGGAGGTCAAGGACTGGATGCAGAAGAAGCGAAGAGGTCTTCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343939.6
ENST00000361711.7
ENST00000393306.6
CDS CCA 72 bp CCATTGTGCAGAGGAAGAAAAGCTGGTCAGGAGGAGTaGGCGTCTTGCCCCAGGTCACCTGACAGGCAGTGG +
Preference number: 6 (lower is better)
Translates to: PLCRGRKAGQEE*ASCPRSPDRQW
Trigger: CCACTGCCTGTCAGGTGACCTGGGGCAAGACGCCCACTCCTCCTGACCAGCTTTTCTTCCTCTGCACAATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563543.1
CDS CCA 72 bp CTCCAGGGAGTGGGCCTGTCCAACTTCAAACCTGGCTaGACCTACCACGCCGATAAGTCCCAGCACGTGTTC +
Preference number: 6 (lower is better)
Translates to: LQGVGLSNFKPG*TYHADKSQHVF
Trigger: GAACACGTGCTGGGACTTATCGGCGTGGTAGGTCCAGCCAGGTTTGAAGTTGGACAGGCCCACTCCCTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563248.2
CDS CCA 72 bp CCTCCGCTCCCGAAGGAACATGAAGTGGCGTGGGAGTaGGGAGTGTGTCATCCACTGTCGGTAAGAGCAGGA +
Preference number: 6 (lower is better)
Translates to: PPLPKEHEVAWE*GVCHPLSVRAG
Trigger: TCCTGCTCTTACCGACAGTGGATGACACACTCCCCACTCCCACGCCACTTCATGTTCCTTCGGGAGCGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563248.2
CDS CCA 72 bp CAACCCCCTCCGCTCCCGAAGGAACATGAAGTGGCGTaGGAGTGGGGAGTGTGTCATCCACTGTCGGTAAGA +
Preference number: 6 (lower is better)
Translates to: QPPPLPKEHEVA*EWGVCHPLSVR
Trigger: TCTTACCGACAGTGGATGACACACTCCCCACTCCCACGCCACTTCATGTTCCTTCGGGAGCGGAGGGGGTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563248.2
CDS CAA 72 bp ATCTGGTGCACCTTGTGGTACTCGGGGTACAGCATCTaGGGCAGCTGGTTGAACACCAGGCCAGGGTCGTCC +
Preference number: 6 (lower is better)
Translates to: IWCTLWYSGYSI*GSWLNTRPGSS
Trigger: GGACGACCCTGGCCTGGTGTTCAACCAGCTGCCCAAGATGCTGTACCCCGAGTACCACAAGGTGCACCAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343939.6
ENST00000361711.7
ENST00000393306.6
CDS CAA 72 bp GGGCCCCTGACCAGGGACTCTACTTGCGGTCTGGGGTaGGGAACTGGGTTTCGGTGTTGTCCAAAGCTTTCC +
Preference number: 6 (lower is better)
Translates to: GPLTRDSTCGLG*GTGFRCCPKLS
Trigger: GGAAAGCTTTGGACAACACCGAAACCCAGTTCCCAACCCCAGACCGCAAGTAGAGTCCCTGGTCAGGGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563248.2
CDS CAA 90 bp CTGGGCACCTGCTGCTACCCTGGTGGAACATTCTGGGCCTCGTGTTaGCCGGAGGCGAAGTCTCACAAAATGAAGGGAACAAGGGTGGCA +
Preference number: 6 (lower is better)
Translates to: LGTCCYPGGTFWASC*PEAKSHKMKGTRVA
Trigger: TGCCACCCTTGTTCCCTTCATTTTGTGAGACTTCGCCTCCGGCAAACACGAGGCCCAGAATGTTCCACCAGGGTAGCAGCAGGTGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563248.2
CDS CCA 72 bp AGGATGGACTGCTCCCGCATCATCTGGTGCACCTTGTaGTACTCGGGGTACAGCATCTTGGGCAGCTGGTTG +
Preference number: 6 (lower is better)
Translates to: RMDCSRIIWCTL*YSGYSILGSWL
Trigger: CAACCAGCTGCCCAAGATGCTGTACCCCGAGTACCACAAGGTGCACCAGATGATGCGGGAGCAGTCCATCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343939.6
ENST00000361711.7
ENST00000393306.6
CDS CCA 72 bp TTGTGTGTGCATGGGACCAGGTGTCTCTCCAGGGAGTaGGCCTGTCCAACTTCAAACCTGGCTGGACCTACC +
Preference number: 6 (lower is better)
Translates to: LCVHGTRCLSRE*ACPTSNLAGPT
Trigger: GGTAGGTCCAGCCAGGTTTGAAGTTGGACAGGCCCACTCCCTGGAGAGACACCTGGTCCCATGCACACACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563248.2
CDS CCA 72 bp AAGCTGGGCACCTGCTGCTACCCTGGTGGAACATTCTaGGCCTCGTGTTTGCCGGAGGCGAAGTCTCACAAA +
Preference number: 6 (lower is better)
Translates to: KLGTCCYPGGTF*ASCLPEAKSHK
Trigger: TTTGTGAGACTTCGCCTCCGGCAAACACGAGGCCCAGAATGTTCCACCAGGGTAGCAGCAGGTGCCCAGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563248.2
CDS CCA 72 bp GGGGGCGGAGGAGACGGGATGTTGAGGACCAAATGGTaGCTTCCCAGTGACGTGTCGGGAATCTGTAAATGC +
Preference number: 6 (lower is better)
Translates to: GGGGDGMLRTKW*LPSDVSGICKC
Trigger: GCATTTACAGATTCCCGACACGTCACTGGGAAGCCACCATTTGGTCCTCAACATCCCGTCTCCTCCGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563248.2
CDS CCA 72 bp CAGCCATGGGTTGTAGTGGAACAGTCTGGAGAGATCTaGGTTCAAACCGCAGCCCCGCCTTTCCTTGTGGGA +
Preference number: 6 (lower is better)
Translates to: QPWVVVEQSGEI*VQTAAPPFLVG
Trigger: TCCCACAAGGAAAGGCGGGGCTGCGGTTTGAACCCAGATCTCTCCAGACTGTTCCACTACAACCCATGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563248.2
CDS CCA 72 bp TCTGGGGGCGGAGGAGACGGGATGTTGAGGACCAAATaGTGGCTTCCCAGTGACGTGTCGGGAATCTGTAAA +
Preference number: 6 (lower is better)
Translates to: SGGGGDGMLRTK*WLPSDVSGICK
Trigger: TTTACAGATTCCCGACACGTCACTGGGAAGCCACCATTTGGTCCTCAACATCCCGTCTCCTCCGCCCCCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563248.2
CDS CAA 72 bp CCAGTGCCTGCCACCGTAGGAAGGACCAGGACACGTTaGGGGGTTACTCCTGGGCAAAGACTCCAAAACCAA +
Preference number: 6 (lower is better)
Translates to: PVPATVGRTRTR*GVTPGQRLQNQ
Trigger: TTGGTTTTGGAGTCTTTGCCCAGGAGTAACCCCCAAACGTGTCCTGGTCCTTCCTACGGTGGCAGGCACTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563248.2
CDS CAA 90 bp CCCTTGGCTGTGACCCTGGAGCCCCAGAAGCCTTTGCTGTCAACCTaGGAGATGTTTAAAATGGGAAAGAGACGGCACGGGAGGAGAGTG +
Preference number: 6 (lower is better)
Translates to: PLAVTLEPQKPLLST*EMFKMGKRRHGRRV
Trigger: CACTCTCCTCCCGTGCCGTCTCTTTCCCATTTTAAACATCTCCAAGGTTGACAGCAAAGGCTTCTGGGGCTCCAGGGTCACAGCCAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563248.2
CDS CCA 72 bp GACCAGGGACTCTACTTGCGGTCTGGGGTTGGGAACTaGGTTTCGGTGTTGTCCAAAGCTTTCCAGGTGGTT +
Preference number: 6 (lower is better)
Translates to: DQGLYLRSGVGN*VSVLSKAFQVV
Trigger: AACCACCTGGAAAGCTTTGGACAACACCGAAACCCAGTTCCCAACCCCAGACCGCAAGTAGAGTCCCTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563248.2
CDS CAA 90 bp AAGTCTCACAAAATGAAGGGAACAAGGGTGGCAGTGTGGCTGTACTaGATCTCATCTGCCCTTGGCTGTGACCCTGGAGCCCCAGAAGCC +
Preference number: 6 (lower is better)
Translates to: KSHKMKGTRVAVWLY*ISSALGCDPGAPEA
Trigger: GGCTTCTGGGGCTCCAGGGTCACAGCCAAGGGCAGATGAGATCAAGTACAGCCACACTGCCACCCTTGTTCCCTTCATTTTGTGAGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563248.2
CDS CAA 72 bp TGCTGCTACCCTGGTGGAACATTCTGGGCCTCGTGTTaGCCGGAGGCGAAGTCTCACAAAATGAAGGGAACA +
Preference number: 6 (lower is better)
Translates to: CCYPGGTFWASC*PEAKSHKMKGT
Trigger: TGTTCCCTTCATTTTGTGAGACTTCGCCTCCGGCAAACACGAGGCCCAGAATGTTCCACCAGGGTAGCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563248.2
CDS CCA 72 bp GTCCAAAGCTTTCCAGGTGGTTCTCATGGGCAGCCATaGGTTGTAGTGGAACAGTCTGGAGAGATCTGGGTT +
Preference number: 6 (lower is better)
Translates to: VQSFPGGSHGQP*VVVEQSGEIWV
Trigger: AACCCAGATCTCTCCAGACTGTTCCACTACAACCCATGGCTGCCCATGAGAACCACCTGGAAAGCTTTGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563248.2
CDS CCA 72 bp GGAACTGGGTTTCGGTGTTGTCCAAAGCTTTCCAGGTaGTTCTCATGGGCAGCCATGGGTTGTAGTGGAACA +
Preference number: 6 (lower is better)
Translates to: GTGFRCCPKLSR*FSWAAMGCSGT
Trigger: TGTTCCACTACAACCCATGGCTGCCCATGAGAACCACCTGGAAAGCTTTGGACAACACCGAAACCCAGTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563248.2
CDS TCA 72 bp TTTGGCACCTCTAGTGGCCATTTACTCCTTTGCCTTTaGAGACACCCCAGGAGGTGGGTGTTCTTATCCCCA +
Preference number: 6 (lower is better)
Translates to: FGTSSGHLLLCL*RHPRRWVFLSP
Trigger: TGGGGATAAGAACACCCACCTCCTGGGGTGTCTTCAAAGGCAAAGGAGTAAATGGCCACTAGAGGTGCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563543.1
CDS GCA 72 bp GCAAACTGCTCTGAGACTCTGGGACACCTGTATGTCTaGGTTTCTTTGGCACCTCTAGTGGCCATTTACTCC +
Preference number: 6 (lower is better)
Translates to: ANCSETLGHLYV*VSLAPLVAIYS
Trigger: GGAGTAAATGGCCACTAGAGGTGCCAAAGAAACGCAGACATACAGGTGTCCCAGAGTCTCAGAGCAGTTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563543.1
CDS CCA 72 bp TTTCGGTGTTGTCCAAAGCTTTCCAGGTGGTTCTCATaGGCAGCCATGGGTTGTAGTGGAACAGTCTGGAGA +
Preference number: 6 (lower is better)
Translates to: FRCCPKLSRWFS*AAMGCSGTVWR
Trigger: TCTCCAGACTGTTCCACTACAACCCATGGCTGCCCATGAGAACCACCTGGAAAGCTTTGGACAACACCGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563248.2
CDS CAA 90 bp GCAAACTGCTCTGAGACTCTGGGACACCTGTATGTCTGCGTTTCTTaGGCACCTCTAGTGGCCATTTACTCCTTTGCCTTTGAAGACACC +
Preference number: 6 (lower is better)
Translates to: ANCSETLGHLYVCVS*APLVAIYSFAFEDT
Trigger: GGTGTCTTCAAAGGCAAAGGAGTAAATGGCCACTAGAGGTGCCAAAGAAACGCAGACATACAGGTGTCCCAGAGTCTCAGAGCAGTTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563543.1
CDS CCA 72 bp CCTGACCTTGTTCTAGAATTTGAAGATTTGCTGATATaGGGAACTGTGGGGCGAGACGTGGACTTTCCTCCC +
Preference number: 6 (lower is better)
Translates to: PDLVLEFEDLLI*GTVGRDVDFPP
Trigger: GGGAGGAAAGTCCACGTCTCGCCCCACAGTTCCCCATATCAGCAAATCTTCAAATTCTAGAACAAGGTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343939.6
ENST00000361711.7
CDS CCA 72 bp AAGTCTCACAAAATGAAGGGAACAAGGGTGGCAGTGTaGCTGTACTTGATCTCATCTGCCCTTGGCTGTGAC +
Preference number: 6 (lower is better)
Translates to: KSHKMKGTRVAV*LYLISSALGCD
Trigger: GTCACAGCCAAGGGCAGATGAGATCAAGTACAGCCACACTGCCACCCTTGTTCCCTTCATTTTGTGAGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563248.2
CDS GCA 72 bp TGGTGGCTTCCCAGTGACGTGTCGGGAATCTGTAAATaGGGCCTTGATTGGAAAAGGGGTCTTTACAGAATT +
Preference number: 6 (lower is better)
Translates to: WWLPSDVSGICK*GLDWKRGLYRI
Trigger: AATTCTGTAAAGACCCCTTTTCCAATCAAGGCCGCATTTACAGATTCCCGACACGTCACTGGGAAGCCACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563248.2
CDS GCA 72 bp TTGAGAGCTTGTGACGTGATCCTCCAAATTCAGGCGTaGTCACAAGAGGGTTTCTGTAATCCCAGCTACTCA +
Preference number: 6 (lower is better)
Translates to: LRACDVILQIQA*SQEGFCNPSYS
Trigger: TGAGTAGCTGGGATTACAGAAACCCTCTTGTGAGCACGCCTGAATTTGGAGGATCACGTCACAAGCTCTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566667.2
CDS CAA 72 bp TCTGAGACTCTGGGACACCTGTATGTCTGCGTTTCTTaGGCACCTCTAGTGGCCATTTACTCCTTTGCCTTT +
Preference number: 6 (lower is better)
Translates to: SETLGHLYVCVS*APLVAIYSFAF
Trigger: AAAGGCAAAGGAGTAAATGGCCACTAGAGGTGCCAAAGAAACGCAGACATACAGGTGTCCCAGAGTCTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563543.1
CDS CAA 90 bp AATGGTGGCTTCCCAGTGACGTGTCGGGAATCTGTAAATGCGGCCTaGATTGGAAAAGGGGTCTTTACAGAATTCATTCAGTTAGGGATC +
Preference number: 6 (lower is better)
Translates to: NGGFPVTCRESVNAA*IGKGVFTEFIQLGI
Trigger: GATCCCTAACTGAATGAATTCTGTAAAGACCCCTTTTCCAATCAAGGCCGCATTTACAGATTCCCGACACGTCACTGGGAAGCCACCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563248.2
CDS CAA 72 bp TTCCCAGTGACGTGTCGGGAATCTGTAAATGCGGCCTaGATTGGAAAAGGGGTCTTTACAGAATTCATTCAG +
Preference number: 6 (lower is better)
Translates to: FPVTCRESVNAA*IGKGVFTEFIQ
Trigger: CTGAATGAATTCTGTAAAGACCCCTTTTCCAATCAAGGCCGCATTTACAGATTCCCGACACGTCACTGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563248.2
CDS TCA 72 bp TCGGTAACAGAATTGCTGAGTTGCTCCTCGAAAGCTTaGCTAAGACAAAGGCCGATACTTGTGCTCTTTAAG +
Preference number: 6 (lower is better)
Translates to: SVTELLSCSSKA*LRQRPILVLFK
Trigger: CTTAAAGAGCACAAGTATCGGCCTTTGTCTTAGTCAAGCTTTCGAGGAGCAACTCAGCAATTCTGTTACCGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566667.2
CDS CCA 72 bp AGTGACGTGTCGGGAATCTGTAAATGCGGCCTTGATTaGAAAAGGGGTCTTTACAGAATTCATTCAGTTAGG +
Preference number: 6 (lower is better)
Translates to: SDVSGICKCGLD*KRGLYRIHSVR
Trigger: CCTAACTGAATGAATTCTGTAAAGACCCCTTTTCCAATCAAGGCCGCATTTACAGATTCCCGACACGTCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563248.2
CDS TCA 72 bp CAGGATAAAAGAAATGAAAACAGTTGCACCTTCGACTaGCGTTTCTTTCAAGTGTGCGGCATTTGTACTTCT +
Preference number: 6 (lower is better)
Translates to: QDKRNENSCTFD*RFFQVCGICTS
Trigger: AGAAGTACAAATGCCGCACACTTGAAAGAAACGTCAGTCGAAGGTGCAACTGTTTTCATTTCTTTTATCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563543.1