Pregenerated sensors for OSER1-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000223891Ensembl transcript IDs: ENST00000435163.5, ENST00000437730.5, ENST00000439943.5, ENST00000442383.1, ENST00000623343.1, ENST00000655968.1, ENST00000656858.1, ENST00000660003.1, ENST00000660193.1, ENST00000660638.1, ENST00000664132.1, ENST00000671199.1
Found 93 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TGGGCACAGGGGCTTGGGCAGTGTGCCCAAGGCCACACAGAGGGGTaGGCATCTGAGGCAGGGCTTCTCAGAGGCAGTGTGGCTCCTAGG | + |
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Preference number: 5 (lower is better) Translates to: WAQGLGQCAQGHTEG*ASEAGLLRGSVAPR Trigger: CCTAGGAGCCACACTGCCTCTGAGAAGCCCTGCCTCAGATGCCCACCCCTCTGTGTGGCCTTGGGCACACTGCCCAAGCCCCTGTGCCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000660638.1 |
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| CDS GCA 90 bp | CTCAGGCTGCTTCCACTCATGGCAGGAGGTGAAGCGGAGCCGGCCTaGACAGATAACACGGCCAGAGAGGGAAGCAAGAGGGAGGAGGCA | + |
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Preference number: 5 (lower is better) Translates to: LRLLPLMAGGEAEPA*TDNTAREGSKREEA Trigger: TGCCTCCTCCCTCTTGCTTCCCTCTCTGGCCGTGTTATCTGTGCAGGCCGGCTCCGCTTCACCTCCTGCCATGAGTGGAAGCAGCCTGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660638.1 |
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| CDS GCA 90 bp | TGCATGGCACCAGCATCTGCCTGGCTTCTAGTGAGTGTCTCAGGCTaGTTCCACTCATGGCAGGAGGTGAAGCGGAGCCGGCCTGCACAG | + |
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Preference number: 5 (lower is better) Translates to: CMAPASAWLLVSVSG*FHSWQEVKRSRPAQ Trigger: CTGTGCAGGCCGGCTCCGCTTCACCTCCTGCCATGAGTGGAAGCAGCCTGAGACACTCACTAGAAGCCAGGCAGATGCTGGTGCCATGCA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660638.1 |
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| CDS CCA 90 bp | ACACAGAGGGGTGGGCATCTGAGGCAGGGCTTCTCAGAGGCAGTGTaGCTCCTAGGCGCTCCGCAACACCTTTACCAAATGCTGCCAGGG | + |
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Preference number: 5 (lower is better) Translates to: TQRGGHLRQGFSEAV*LLGAPQHLYQMLPG Trigger: CCCTGGCAGCATTTGGTAAAGGTGTTGCGGAGCGCCTAGGAGCCACACTGCCTCTGAGAAGCCCTGCCTCAGATGCCCACCCCTCTGTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660638.1 |
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| CDS CCA 90 bp | GAAAGTACAGTGACTTGCCCAAGGGCCCACAAGAAGTGGTGGCCCTaGAGGGATGAGAGGGAACCCAGTTCTCTGGAGTCCCAGGCCGCT | + |
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Preference number: 5 (lower is better) Translates to: ESTVTCPRAHKKWWP*RDEREPSSLESQAA Trigger: AGCGGCCTGGGACTCCAGAGAACTGGGTTCCCTCTCATCCCTCCAGGGCCACCACTTCTTGTGGGCCCTTGGGCAAGTCACTGTACTTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000435163.5 ENST00000437730.5 ENST00000439943.5 ENST00000442383.1 ENST00000655968.1 ENST00000656858.1 ENST00000660003.1 ENST00000664132.1 ENST00000671199.1 |
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| CDS CCA 90 bp | CCGGAGAGGTCGCAGGCAGTCCAGATTCTAGCATCACAGAAACTCTaGCCAAGCGCTCAGCCGGGGATTGTCTGCCATAAAGACCCCCGC | + |
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Preference number: 5 (lower is better) Translates to: PERSQAVQILASQKL*PSAQPGIVCHKDPR Trigger: GCGGGGGTCTTTATGGCAGACAATCCCCGGCTGAGCGCTTGGCCAGAGTTTCTGTGATGCTAGAATCTGGACTGCCTGCGACCTCTCCGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000435163.5 ENST00000442383.1 ENST00000655968.1 ENST00000664132.1 |
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| CDS CCA 90 bp | CTTCACTTCTCTGCAGGACCTAAAAGATCACCAGGAGGCGAGGGCTaGTGTCCGAGTCCCGGAGAGGTCGCAGGCAGTCCAGATTCTAGC | + |
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Preference number: 5 (lower is better) Translates to: LHFSAGPKRSPGGEG*CPSPGEVAGSPDSS Trigger: GCTAGAATCTGGACTGCCTGCGACCTCTCCGGGACTCGGACACCAGCCCTCGCCTCCTGGTGATCTTTTAGGTCCTGCAGAGAAGTGAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000435163.5 ENST00000442383.1 ENST00000655968.1 ENST00000664132.1 |
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| CDS CCA 90 bp | GTGGAACTGAATCGCCTGAGGCAATGCTCAGAGATTCCTGGCACCTaGGAAGGGCTCGGTCTGGCTCCCAGGCTGATAAGGCCTAGCTGT | + |
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Preference number: 5 (lower is better) Translates to: VELNRLRQCSEIPGT*EGLGLAPRLIRPSC Trigger: ACAGCTAGGCCTTATCAGCCTGGGAGCCAGACCGAGCCCTTCCCAGGTGCCAGGAATCTCTGAGCATTGCCTCAGGCGATTCAGTTCCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660638.1 |
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| CDS CCA 90 bp | GACTCAGAAAGTACAGTGACTTGCCCAAGGGCCCACAAGAAGTGGTaGCCCTGGAGGGATGAGAGGGAACCCAGTTCTCTGGAGTCCCAG | + |
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Preference number: 5 (lower is better) Translates to: DSESTVTCPRAHKKW*PWRDEREPSSLESQ Trigger: CTGGGACTCCAGAGAACTGGGTTCCCTCTCATCCCTCCAGGGCCACCACTTCTTGTGGGCCCTTGGGCAAGTCACTGTACTTTCTGAGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000435163.5 ENST00000437730.5 ENST00000439943.5 ENST00000442383.1 ENST00000655968.1 ENST00000656858.1 ENST00000660003.1 ENST00000664132.1 ENST00000671199.1 |
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| CDS TCA 90 bp | CGACCACGTGGGAGTGAAGACCAGCAACAGGCAGGGAATGGCATCTaGGCCATAAAGCTTACCCACTGCCCCCTTATACCCAGATGCCAC | + |
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Preference number: 5 (lower is better) Translates to: RPRGSEDQQQAGNGI*AIKLTHCPLIPRCH Trigger: GTGGCATCTGGGTATAAGGGGGCAGTGGGTAAGCTTTATGGCTCAGATGCCATTCCCTGCCTGTTGCTGGTCTTCACTCCCACGTGGTCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000660638.1 |
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| CDS CCA 90 bp | AAGCAGGCACGCCCCAAAAGCGGGTCGGGAGCAAATCCACGCCACTaGGAGGAGGCAAACCGAAGAATAACAGGAAATTACGTAAGGCGC | + |
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Preference number: 5 (lower is better) Translates to: KQARPKSGSGANPRH*EEANRRITGNYVRR Trigger: GCGCCTTACGTAATTTCCTGTTATTCTTCGGTTTGCCTCCTCCCAGTGGCGTGGATTTGCTCCCGACCCGCTTTTGGGGCGTGCCTGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000439943.5 ENST00000660003.1 ENST00000671199.1 |
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| CDS CCA 90 bp | TTGACATCTGACTGTCACTCACGAGCTCAAGTGGCTTCGCCTCTCTaGGGCTCATCTCGCTACCTGAAAGGGTGTGGTGAGGATGGCCCT | + |
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Preference number: 5 (lower is better) Translates to: LTSDCHSRAQVASPL*GSSRYLKGCGEDGP Trigger: AGGGCCATCCTCACCACACCCTTTCAGGTAGCGAGATGAGCCCCAGAGAGGCGAAGCCACTTGAGCTCGTGAGTGACAGTCAGATGTCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000437730.5 ENST00000623343.1 |
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| CDS TCA 90 bp | TTCCATATTCTCCAACCCGGCATCATCCTGGAAGTGAATGTGAGATaGGAAGACAGCCAAGGCATGGCCCCTGAGGGTCAGCAGACCGGC | + |
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Preference number: 5 (lower is better) Translates to: FHILQPGIILEVNVR*EDSQGMAPEGQQTG Trigger: GCCGGTCTGCTGACCCTCAGGGGCCATGCCTTGGCTGTCTTCTCATCTCACATTCACTTCCAGGATGATGCCGGGTTGGAGAATATGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660638.1 |
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| CDS GCA 90 bp | GAGGGAACCCAGTTCTCTGGAGTCCCAGGCCGCTGTTCCTTCTGCTaGAACTCCCCAAGTAACAGGAACAGGTGCAGCAATGGGCATTTA | + |
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Preference number: 5 (lower is better) Translates to: EGTQFSGVPGRCSFC*NSPSNRNRCSNGHL Trigger: TAAATGCCCATTGCTGCACCTGTTCCTGTTACTTGGGGAGTTGCAGCAGAAGGAACAGCGGCCTGGGACTCCAGAGAACTGGGTTCCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000435163.5 ENST00000437730.5 ENST00000439943.5 ENST00000442383.1 ENST00000655968.1 ENST00000656858.1 ENST00000660003.1 ENST00000664132.1 ENST00000671199.1 |
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| CDS CCA 90 bp | GCTCACTTTCTCTATTCGGCTGCTGCAGGAGAAGTCCTTAACCAGTaGTCTGTGGCTTTCTCGGAGGAAGGGAGGGAGGGCTGTCTTGTG | + |
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Preference number: 5 (lower is better) Translates to: AHFLYSAAAGEVLNQ*SVAFSEEGREGCLV Trigger: CACAAGACAGCCCTCCCTCCCTTCCTCCGAGAAAGCCACAGACCACTGGTTAAGGACTTCTCCTGCAGCAGCCGAATAGAGAAAGTGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660193.1 |
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| CDS GCA 90 bp | CCCCACCCCTTTCCACACAGTCTTGGTGAGACAATCAAAGTGTCCTaGCACCCAAGCAGTGGGCACATCTGCCAAGACAGGTGTAAAGGA | + |
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Preference number: 5 (lower is better) Translates to: PHPFPHSLGETIKVS*HPSSGHICQDRCKG Trigger: TCCTTTACACCTGTCTTGGCAGATGTGCCCACTGCTTGGGTGGCAGGACACTTTGATTGTCTCACCAAGACTGTGTGGAAAGGGGTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000660638.1 |
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| CDS CCA 90 bp | AGGCCAGGTGACAAGCTGCGAGGGTTGTGGCACATGAGGACCTCATaGCTACAGACAGGCAATTTTCTAAGCAGGTCCGTGTACTGCTCA | + |
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Preference number: 5 (lower is better) Translates to: RPGDKLRGLWHMRTS*LQTGNFLSRSVYCS Trigger: TGAGCAGTACACGGACCTGCTTAGAAAATTGCCTGTCTGTAGCCATGAGGTCCTCATGTGCCACAACCCTCGCAGCTTGTCACCTGGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660638.1 |
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| CDS CCA 90 bp | GGACTGAGGGACAAAGAGAGGCCAGGTGACAAGCTGCGAGGGTTGTaGCACATGAGGACCTCATGGCTACAGACAGGCAATTTTCTAAGC | + |
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Preference number: 5 (lower is better) Translates to: GLRDKERPGDKLRGL*HMRTSWLQTGNFLS Trigger: GCTTAGAAAATTGCCTGTCTGTAGCCATGAGGTCCTCATGTGCCACAACCCTCGCAGCTTGTCACCTGGCCTCTCTTTGTCCCTCAGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660638.1 |
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| CDS TCA 90 bp | CAAATTGGTGCAGGCTTAATGGGAATCGGCACACAGGCGCATGGCTaGGGCATCAGAGTCCTCCTTTACCTCCTTTACTCTCCATCCTGT | + |
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Preference number: 5 (lower is better) Translates to: QIGAGLMGIGTQAHG*GIRVLLYLLYSPSC Trigger: ACAGGATGGAGAGTAAAGGAGGTAAAGGAGGACTCTGATGCCTCAGCCATGCGCCTGTGTGCCGATTCCCATTAAGCCTGCACCAATTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000435163.5 ENST00000623343.1 ENST00000660003.1 ENST00000660193.1 ENST00000660638.1 |
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| CDS CCA 90 bp | ACCCAGTGGTATTTTCCAGGTGAAAGCAGGTATCCCTGGTCTAGCTaGGTACATACAGGAGGTGAAGGTGGGGAGGCTAAGGAAAGCAGT | + |
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Preference number: 5 (lower is better) Translates to: TQWYFPGESRYPWSS*VHTGGEGGEAKESS Trigger: ACTGCTTTCCTTAGCCTCCCCACCTTCACCTCCTGTATGTACCCAGCTAGACCAGGGATACCTGCTTTCACCTGGAAAATACCACTGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000656858.1 |
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| CDS CCA 90 bp | TTTCCTCAAACCCAGTGGTATTTTCCAGGTGAAAGCAGGTATCCCTaGTCTAGCTGGGTACATACAGGAGGTGAAGGTGGGGAGGCTAAG | + |
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Preference number: 5 (lower is better) Translates to: FPQTQWYFPGESRYP*SSWVHTGGEGGEAK Trigger: CTTAGCCTCCCCACCTTCACCTCCTGTATGTACCCAGCTAGACCAGGGATACCTGCTTTCACCTGGAAAATACCACTGGGTTTGAGGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000656858.1 |
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| CDS CCA 90 bp | CTACCCTCCTCGAAGGAAAACTCCTATGTAGGACTAAGAAGCATCTaGACAGGTTTGGGGGACAGTAGGATCCCACTTTCCCAAGCACAG | + |
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Preference number: 5 (lower is better) Translates to: LPSSKENSYVGLRSI*TGLGDSRIPLSQAQ Trigger: CTGTGCTTGGGAAAGTGGGATCCTACTGTCCCCCAAACCTGTCCAGATGCTTCTTAGTCCTACATAGGAGTTTTCCTTCGAGGAGGGTAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000660638.1 |
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| CDS GCA 90 bp | GGCAGATGTGACCTGAAGCTATGGAAGACATTTACTGTTTCTGCCTaGCCTTTCCCTCTACCCCTTTTATGGGTGACAGCAGCCCACTTT | + |
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Preference number: 5 (lower is better) Translates to: GRCDLKLWKTFTVSA*PFPLPLLWVTAAHF Trigger: AAAGTGGGCTGCTGTCACCCATAAAAGGGGTAGAGGGAAAGGGCAGGCAGAAACAGTAAATGTCTTCCATAGCTTCAGGTCACATCTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000660638.1 |
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| CDS CCA 90 bp | AAATCAAATTGGTGCAGGCTTAATGGGAATCGGCACACAGGCGCATaGCTGAGGCATCAGAGTCCTCCTTTACCTCCTTTACTCTCCATC | + |
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Preference number: 5 (lower is better) Translates to: KSNWCRLNGNRHTGA*LRHQSPPLPPLLSI Trigger: GATGGAGAGTAAAGGAGGTAAAGGAGGACTCTGATGCCTCAGCCATGCGCCTGTGTGCCGATTCCCATTAAGCCTGCACCAATTTGATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000435163.5 ENST00000623343.1 ENST00000660003.1 ENST00000660193.1 ENST00000660638.1 |
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| CDS CCA 90 bp | GGAAATATGCCTGCTGGGTTCAAATATATGCAAAGAAAGAGTGGCTaGAACAGTCCTAGGCCCTGGGCAGCCAATTTCCTCAAACCCAGT | + |
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Preference number: 5 (lower is better) Translates to: GNMPAGFKYMQRKSG*NSPRPWAANFLKPS Trigger: ACTGGGTTTGAGGAAATTGGCTGCCCAGGGCCTAGGACTGTTCCAGCCACTCTTTCTTTGCATATATTTGAACCCAGCAGGCATATTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656858.1 |
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| CDS TCA 90 bp | CACATGGGCTGCAGATATGAATGTGGTATCAGCAGCAGGCAGATGTaGCCTGAAGCTATGGAAGACATTTACTGTTTCTGCCTGCCCTTT | + |
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Preference number: 5 (lower is better) Translates to: HMGCRYECGISSRQM*PEAMEDIYCFCLPF Trigger: AAAGGGCAGGCAGAAACAGTAAATGTCTTCCATAGCTTCAGGTCACATCTGCCTGCTGCTGATACCACATTCATATCTGCAGCCCATGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660638.1 |
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| CDS GCA 90 bp | CCAGGAGGGGAAATACATACAAAAGACCTGAGAGGGAAATATGCCTaGTGGGTTCAAATATATGCAAAGAAAGAGTGGCTGGAACAGTCC | + |
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Preference number: 5 (lower is better) Translates to: PGGEIHTKDLRGKYA*WVQIYAKKEWLEQS Trigger: GGACTGTTCCAGCCACTCTTTCTTTGCATATATTTGAACCCAGCAGGCATATTTCCCTCTCAGGTCTTTTGTATGTATTTCCCCTCCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000656858.1 |
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| CDS CCA 90 bp | TTCAAATATATGCAAAGAAAGAGTGGCTGGAACAGTCCTAGGCCCTaGGCAGCCAATTTCCTCAAACCCAGTGGTATTTTCCAGGTGAAA | + |
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Preference number: 5 (lower is better) Translates to: FKYMQRKSGWNSPRP*AANFLKPSGIFQVK Trigger: TTTCACCTGGAAAATACCACTGGGTTTGAGGAAATTGGCTGCCCAGGGCCTAGGACTGTTCCAGCCACTCTTTCTTTGCATATATTTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656858.1 |
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| CDS GCA 90 bp | CGCACACACAGCTTCCTCAAACTTTTTCCCAGTTATATAGTATTTTaGTTTGTGGATGCACCAGTCCTGTACATACACTTCAGTTGTTTC | + |
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Preference number: 5 (lower is better) Translates to: RTHSFLKLFPSYIVF*FVDAPVLYIHFSCF Trigger: GAAACAACTGAAGTGTATGTACAGGACTGGTGCATCCACAAAGCAAAATACTATATAACTGGGAAAAAGTTTGAGGAAGCTGTGTGTGCG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000660193.1 |
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| CDS CCA 90 bp | GGAGCCATTGCCTGGCTCTGTTTTAAATTAGATTTCTTGAGTCTGTaGACATTAGTGTTAAAATGTGACTTCGTTGAGGCAGAAACAGTT | + |
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Preference number: 5 (lower is better) Translates to: GAIAWLCFKLDFLSL*TLVLKCDFVEAETV Trigger: AACTGTTTCTGCCTCAACGAAGTCACATTTTAACACTAATGTCCACAGACTCAAGAAATCTAATTTAAAACAGAGCCAGGCAATGGCTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000660638.1 |
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| CDS TCA 72 bp | CCCAAGGGCCCACAAGAAGTGGTGGCCCTGGAGGGATaGGAGGGAACCCAGTTCTCTGGAGTCCCAGGCCGC | + |
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Preference number: 6 (lower is better) Translates to: PKGPQEVVALEG*EGTQFSGVPGR Trigger: GCGGCCTGGGACTCCAGAGAACTGGGTTCCCTCTCATCCCTCCAGGGCCACCACTTCTTGTGGGCCCTTGGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000435163.5 ENST00000437730.5 ENST00000439943.5 ENST00000442383.1 ENST00000655968.1 ENST00000656858.1 ENST00000660003.1 ENST00000664132.1 ENST00000671199.1 |
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| CDS CCA 72 bp | GGGCTTGGGCAGTGTGCCCAAGGCCACACAGAGGGGTaGGCATCTGAGGCAGGGCTTCTCAGAGGCAGTGTG | + |
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Preference number: 6 (lower is better) Translates to: GLGQCAQGHTEG*ASEAGLLRGSV Trigger: CACACTGCCTCTGAGAAGCCCTGCCTCAGATGCCCACCCCTCTGTGTGGCCTTGGGCACACTGCCCAAGCCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660638.1 |
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| CDS TCA 72 bp | TCCTCGCCCCCGCCCCGTGGAATTCCTCTGCATAGGTaGCTCCACGTAGAGGACCGAGCGCAAGGAGATCCC | + |
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Preference number: 6 (lower is better) Translates to: SSPPPRGIPLHR*LHVEDRAQGDP Trigger: GGGATCTCCTTGCGCTCGGTCCTCTACGTGGAGTCACCTATGCAGAGGAATTCCACGGGGCGGGGGCGAGGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000435163.5 ENST00000442383.1 ENST00000655968.1 ENST00000664132.1 |
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| CDS CCA 72 bp | TCTGCAGGACCTAAAAGATCACCAGGAGGCGAGGGCTaGTGTCCGAGTCCCGGAGAGGTCGCAGGCAGTCCA | + |
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Preference number: 6 (lower is better) Translates to: SAGPKRSPGGEG*CPSPGEVAGSP Trigger: TGGACTGCCTGCGACCTCTCCGGGACTCGGACACCAGCCCTCGCCTCCTGGTGATCTTTTAGGTCCTGCAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000435163.5 ENST00000442383.1 ENST00000655968.1 ENST00000664132.1 |
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| CDS CCA 72 bp | GTGACTTGCCCAAGGGCCCACAAGAAGTGGTGGCCCTaGAGGGATGAGAGGGAACCCAGTTCTCTGGAGTCC | + |
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Preference number: 6 (lower is better) Translates to: VTCPRAHKKWWP*RDEREPSSLES Trigger: GGACTCCAGAGAACTGGGTTCCCTCTCATCCCTCCAGGGCCACCACTTCTTGTGGGCCCTTGGGCAAGTCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000435163.5 ENST00000437730.5 ENST00000439943.5 ENST00000442383.1 ENST00000655968.1 ENST00000656858.1 ENST00000660003.1 ENST00000664132.1 ENST00000671199.1 |
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| CDS CAA 72 bp | CATCACAGAAACTCTGGCCAAGCGCTCAGCCGGGGATaGTCTGCCATAAAGACCCCCGCACCCTGTCCTCGC | + |
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Preference number: 6 (lower is better) Translates to: HHRNSGQALSRG*SAIKTPAPCPR Trigger: GCGAGGACAGGGTGCGGGGGTCTTTATGGCAGACAATCCCCGGCTGAGCGCTTGGCCAGAGTTTCTGTGATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000435163.5 ENST00000442383.1 ENST00000655968.1 ENST00000664132.1 |
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| CDS GCA 72 bp | GCCATAAAGCTTACCCACTGCCCCCTTATACCCAGATaGCACGCCGGGAGGATGGGAGCACACAGGAGAGAG | + |
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Preference number: 6 (lower is better) Translates to: AIKLTHCPLIPR*HAGRMGAHRRE Trigger: CTCTCTCCTGTGTGCTCCCATCCTCCCGGCGTGGCATCTGGGTATAAGGGGGCAGTGGGTAAGCTTTATGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000660638.1 |
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| CDS CCA 72 bp | ACTGCCCCCTTATACCCAGATGCCACGCCGGGAGGATaGGAGCACACAGGAGAGAGGAGGATCCTGAACACT | + |
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Preference number: 6 (lower is better) Translates to: TAPLYPDATPGG*EHTGERRILNT Trigger: AGTGTTCAGGATCCTCCTCTCTCCTGTGTGCTCCCATCCTCCCGGCGTGGCATCTGGGTATAAGGGGGCAGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000660638.1 |
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| CDS TCA 72 bp | CCCGGGGCGGTGGAGGCAGAGGACTACTGTGAAGAATaGCGCCTACTCACTCACCTAACAGAGAGGAGGAAG | + |
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Preference number: 6 (lower is better) Translates to: PGAVEAEDYCEE*RLLTHLTERRK Trigger: CTTCCTCCTCTCTGTTAGGTGAGTGAGTAGGCGTCATTCTTCACAGTAGTCCTCTGCCTCCACCGCCCCGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000435163.5 ENST00000655968.1 ENST00000664132.1 |
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| CDS GCA 72 bp | ACCCAGTTCTCTGGAGTCCCAGGCCGCTGTTCCTTCTaGTGCAACTCCCCAAGTAACAGGAACAGGTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: TQFSGVPGRCSF*CNSPSNRNRCS Trigger: GCTGCACCTGTTCCTGTTACTTGGGGAGTTGCAGCAGAAGGAACAGCGGCCTGGGACTCCAGAGAACTGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000435163.5 ENST00000437730.5 ENST00000439943.5 ENST00000442383.1 ENST00000655968.1 ENST00000656858.1 ENST00000660003.1 ENST00000664132.1 ENST00000671199.1 |
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| CDS CCA 72 bp | GACTGTCACTCACGAGCTCAAGTGGCTTCGCCTCTCTaGGGCTCATCTCGCTACCTGAAAGGGTGTGGTGAG | + |
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Preference number: 6 (lower is better) Translates to: DCHSRAQVASPL*GSSRYLKGCGE Trigger: CTCACCACACCCTTTCAGGTAGCGAGATGAGCCCCAGAGAGGCGAAGCCACTTGAGCTCGTGAGTGACAGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000437730.5 ENST00000623343.1 |
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| CDS CAA 72 bp | AGGGACAAAGAGAGGCCAGGTGACAAGCTGCGAGGGTaGTGGCACATGAGGACCTCATGGCTACAGACAGGC | + |
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Preference number: 6 (lower is better) Translates to: RDKERPGDKLRG*WHMRTSWLQTG Trigger: GCCTGTCTGTAGCCATGAGGTCCTCATGTGCCACAACCCTCGCAGCTTGTCACCTGGCCTCTCTTTGTCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660638.1 |
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| CDS TCA 72 bp | CTCCAACCCGGCATCATCCTGGAAGTGAATGTGAGATaGGAAGACAGCCAAGGCATGGCCCCTGAGGGTCAG | + |
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Preference number: 6 (lower is better) Translates to: LQPGIILEVNVR*EDSQGMAPEGQ Trigger: CTGACCCTCAGGGGCCATGCCTTGGCTGTCTTCTCATCTCACATTCACTTCCAGGATGATGCCGGGTTGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660638.1 |
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| CDS CCA 72 bp | GACTGTCACTCACGAGCTCAAGTGGCTTCGCCTCTCTaGGGCTCATCTGTAATCCCAGCTACTGAGGAGGCT | + |
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Preference number: 6 (lower is better) Translates to: DCHSRAQVASPL*GSSVIPATEEA Trigger: AGCCTCCTCAGTAGCTGGGATTACAGATGAGCCCCAGAGAGGCGAAGCCACTTGAGCTCGTGAGTGACAGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000439943.5 ENST00000655968.1 ENST00000656858.1 |
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| CDS CCA 72 bp | GCTCTAACAAATGGGCCTGGGGTGAACTCATTACCATaGGAGGGCACCATGCCATTCCTGAGGGATCCACCC | + |
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Preference number: 6 (lower is better) Translates to: ALTNGPGVNSLP*EGTMPFLRDPP Trigger: GGGTGGATCCCTCAGGAATGGCATGGTGCCCTCCCATGGTAATGAGTTCACCCCAGGCCCATTTGTTAGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660638.1 |
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| CDS TCA 72 bp | AAGTGGCTTCGCCTCTCTGGGGCTCATCTCGCTACCTaGAAGGGTGTGGTGAGGATGGCCCTAATACACACA | + |
|
Preference number: 6 (lower is better) Translates to: KWLRLSGAHLAT*KGVVRMALIHT Trigger: TGTGTGTATTAGGGCCATCCTCACCACACCCTTTCAGGTAGCGAGATGAGCCCCAGAGAGGCGAAGCCACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000437730.5 ENST00000623343.1 |
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| CDS TCA 72 bp | GGGAGTGAAGACCAGCAACAGGCAGGGAATGGCATCTaGGCCATAAAGCTTACCCACTGCCCCCTTATACCC | + |
|
Preference number: 6 (lower is better) Translates to: GSEDQQQAGNGI*AIKLTHCPLIP Trigger: GGGTATAAGGGGGCAGTGGGTAAGCTTTATGGCTCAGATGCCATTCCCTGCCTGTTGCTGGTCTTCACTCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000660638.1 |
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| CDS CCA 72 bp | CGCCCCAAAAGCGGGTCGGGAGCAAATCCACGCCACTaGGAGGAGGCAAACCGAAGAATAACAGGAAATTAC | + |
|
Preference number: 6 (lower is better) Translates to: RPKSGSGANPRH*EEANRRITGNY Trigger: GTAATTTCCTGTTATTCTTCGGTTTGCCTCCTCCCAGTGGCGTGGATTTGCTCCCGACCCGCTTTTGGGGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000439943.5 ENST00000660003.1 ENST00000671199.1 |
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| CDS CCA 72 bp | CTTGGGTCACAGTTCTGCATGGCACCAGCATCTGCCTaGCTTCTAGTGAGTGTCTCAGGCTGCTTCCACTCA | + |
|
Preference number: 6 (lower is better) Translates to: LGSQFCMAPASA*LLVSVSGCFHS Trigger: TGAGTGGAAGCAGCCTGAGACACTCACTAGAAGCCAGGCAGATGCTGGTGCCATGCAGAACTGTGACCCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660638.1 |
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| CDS TCA 72 bp | AGGCAGCACGCTTTAGAAAGAGCAGGGCTTGACATCTaGCTGTCACTCACGAGCTCAAGTGGCTTCGCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: RQHALERAGLDI*LSLTSSSGFAS Trigger: AGAGGCGAAGCCACTTGAGCTCGTGAGTGACAGTCAGATGTCAAGCCCTGCTCTTTCTAAAGCGTGCTGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000435163.5 ENST00000437730.5 ENST00000439943.5 ENST00000442383.1 ENST00000623343.1 ENST00000655968.1 ENST00000656858.1 ENST00000660003.1 ENST00000664132.1 ENST00000671199.1 |
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| CDS TCA 72 bp | GCAGGCTTAATGGGAATCGGCACACAGGCGCATGGCTaGGGCATCAGAGTCCTCCTTTACCTCCTTTACTCT | + |
|
Preference number: 6 (lower is better) Translates to: AGLMGIGTQAHG*GIRVLLYLLYS Trigger: AGAGTAAAGGAGGTAAAGGAGGACTCTGATGCCTCAGCCATGCGCCTGTGTGCCGATTCCCATTAAGCCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000435163.5 ENST00000623343.1 ENST00000660003.1 ENST00000660193.1 ENST00000660638.1 |
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| CDS TCA 72 bp | CTCACTCATCACCACAGGATGGCGCTAAGCCAAGCATaGGGAATATGCCCCCATGATCCAAACACCTCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: LTHHHRMALSQA*GICPHDPNTSH Trigger: GTGGGAGGTGTTTGGATCATGGGGGCATATTCCTCATGCTTGGCTTAGCGCCATCCTGTGGTGATGAGTGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000660638.1 |
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| CDS GCA 72 bp | TTTGCTTGGGTCACAGTTCTGCATGGCACCAGCATCTaGCTGGCTTCTAGTGAGTGTCTCAGGCTGCTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: FAWVTVLHGTSI*LASSECLRLLP Trigger: TGGAAGCAGCCTGAGACACTCACTAGAAGCCAGGCAGATGCTGGTGCCATGCAGAACTGTGACCCAAGCAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660638.1 |
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| CDS CCA 72 bp | TCGCAGGCAGTCCAGATTCTAGCATCACAGAAACTCTaGCCAAGCGCTCAGCCGGGGATTGTCTGCCATAAA | + |
|
Preference number: 6 (lower is better) Translates to: SQAVQILASQKL*PSAQPGIVCHK Trigger: TTTATGGCAGACAATCCCCGGCTGAGCGCTTGGCCAGAGTTTCTGTGATGCTAGAATCTGGACTGCCTGCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000435163.5 ENST00000442383.1 ENST00000655968.1 ENST00000664132.1 |
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| CDS CCA 72 bp | TGGTGCAGGCTTAATGGGAATCGGCACACAGGCGCATaGCTGAGGCATCAGAGTCCTCCTTTACCTCCTTTA | + |
|
Preference number: 6 (lower is better) Translates to: WCRLNGNRHTGA*LRHQSPPLPPL Trigger: TAAAGGAGGTAAAGGAGGACTCTGATGCCTCAGCCATGCGCCTGTGTGCCGATTCCCATTAAGCCTGCACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000435163.5 ENST00000623343.1 ENST00000660003.1 ENST00000660193.1 ENST00000660638.1 |
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| CDS CCA 72 bp | GACAAGCTGCGAGGGTTGTGGCACATGAGGACCTCATaGCTACAGACAGGCAATTTTCTAAGCAGGTCCGTG | + |
|
Preference number: 6 (lower is better) Translates to: DKLRGLWHMRTS*LQTGNFLSRSV Trigger: CACGGACCTGCTTAGAAAATTGCCTGTCTGTAGCCATGAGGTCCTCATGTGCCACAACCCTCGCAGCTTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660638.1 |
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| CDS CAA 90 bp | AGTGGACTGAGGGACAAAGAGAGGCCAGGTGACAAGCTGCGAGGGTaGTGGCACATGAGGACCTCATGGCTACAGACAGGCAATTTTCTA | + |
|
Preference number: 6 (lower is better) Translates to: SGLRDKERPGDKLRG*WHMRTSWLQTGNFL Trigger: TAGAAAATTGCCTGTCTGTAGCCATGAGGTCCTCATGTGCCACAACCCTCGCAGCTTGTCACCTGGCCTCTCTTTGTCCCTCAGTCCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660638.1 |
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| CDS TCA 72 bp | TTCACCAGGTGTCAGAGGGACATCCACATAGGCGACTaGATAGGAAGACTGTGGACACAGAGGTGTGGCATC | + |
|
Preference number: 6 (lower is better) Translates to: FTRCQRDIHIGD*IGRLWTQRCGI Trigger: GATGCCACACCTCTGTGTCCACAGTCTTCCTATTCAGTCGCCTATGTGGATGTCCCTCTGACACCTGGTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660638.1 |
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| CDS TCA 72 bp | CTGTATAGGAAGTGGGGTGCTGGCATCTGCTTCTGGTaGGGCCATAGGGAATTTACAGTCATGGTGGAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: LYRKWGAGICFW*GHREFTVMVEG Trigger: GCCTTCCACCATGACTGTAAATTCCCTATGGCCTCACCAGAAGCAGATGCCAGCACCCCACTTCCTATACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660638.1 |
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| CDS CCA 72 bp | ACCCAGTGGTATTTTCCAGGTGAAAGCAGGTATCCCTaGTCTAGCTGGGTACATACAGGAGGTGAAGGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: TQWYFPGESRYP*SSWVHTGGEGG Trigger: CCCACCTTCACCTCCTGTATGTACCCAGCTAGACCAGGGATACCTGCTTTCACCTGGAAAATACCACTGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656858.1 |
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| CDS CAA 72 bp | CCTTTGGAGAAGTACCCCACCCCTTTCCACACAGTCTaGGTGAGACAATCAAAGTGTCCTGCCACCCAAGCA | + |
|
Preference number: 6 (lower is better) Translates to: PLEKYPTPFHTV*VRQSKCPATQA Trigger: TGCTTGGGTGGCAGGACACTTTGATTGTCTCACCAAGACTGTGTGGAAAGGGGTGGGGTACTTCTCCAAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000660638.1 |
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| CDS CAA 90 bp | TCGAAGGAAAACTCCTATGTAGGACTAAGAAGCATCTGGACAGGTTaGGGGGACAGTAGGATCCCACTTTCCCAAGCACAGCCCAGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: SKENSYVGLRSIWTG*GDSRIPLSQAQPRE Trigger: CTCCCTGGGCTGTGCTTGGGAAAGTGGGATCCTACTGTCCCCCAAACCTGTCCAGATGCTTCTTAGTCCTACATAGGAGTTTTCCTTCGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000660638.1 |
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| CDS CAA 90 bp | GCAGGTCCGTGTACTGCTCAGGAACTAAATCAGGTTCACCCCATTTaGGTAGGTTCCACCATAATCCGTAATGCCCGGGGACAAATTCCG | + |
|
Preference number: 6 (lower is better) Translates to: AGPCTAQELNQVHPI*VGSTIIRNARGQIP Trigger: CGGAATTTGTCCCCGGGCATTACGGATTATGGTGGAACCTACCAAAATGGGGTGAACCTGATTTAGTTCCTGAGCAGTACACGGACCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000660638.1 |
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| CDS TCA 72 bp | GGCCCCACCTCCAACACTGGAGATTACAGTTCGACATaGGATTTGGAGGGGACAAACATCCAAGCCAGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: GPTSNTGDYSST*DLEGTNIQASS Trigger: TGAACTGGCTTGGATGTTTGTCCCCTCCAAATCTCATGTCGAACTGTAATCTCCAGTGTTGGAGGTGGGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000660638.1 |
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| CDS CCA 72 bp | TATTTTCCAGGTGAAAGCAGGTATCCCTGGTCTAGCTaGGTACATACAGGAGGTGAAGGTGGGGAGGCTAAG | + |
|
Preference number: 6 (lower is better) Translates to: YFPGESRYPWSS*VHTGGEGGEAK Trigger: CTTAGCCTCCCCACCTTCACCTCCTGTATGTACCCAGCTAGACCAGGGATACCTGCTTTCACCTGGAAAATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000656858.1 |
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| CDS CCA 72 bp | AGGCGACTGAATAGGAAGACTGTGGACACAGAGGTGTaGCATCGAGGAGACACATGGGCTGCAGATATGAAT | + |
|
Preference number: 6 (lower is better) Translates to: RRLNRKTVDTEV*HRGDTWAADMN Trigger: ATTCATATCTGCAGCCCATGTGTCTCCTCGATGCCACACCTCTGTGTCCACAGTCTTCCTATTCAGTCGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660638.1 |
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| CDS TCA 72 bp | TTTCTGAAGGCAGCACGCTTTAGAAAGAGCAGGGCTTaGCATCTGACTGTCACTCACGAGCTCAAGTGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: FLKAARFRKSRA*HLTVTHELKWL Trigger: AAGCCACTTGAGCTCGTGAGTGACAGTCAGATGTCAAGCCCTGCTCTTTCTAAAGCGTGCTGCCTTCAGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000435163.5 ENST00000437730.5 ENST00000439943.5 ENST00000442383.1 ENST00000623343.1 ENST00000655968.1 ENST00000656858.1 ENST00000660003.1 ENST00000664132.1 ENST00000671199.1 |
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| CDS TCA 72 bp | AAAACCACTTATCGGGCACTATGCTCACCACTGGGGTaGCTAATTCATTCGTACTCCCAAACCTCAGCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: KTTYRALCSPLG*LIHSYSQTSAA Trigger: GGCTGCTGAGGTTTGGGAGTACGAATGAATTAGTCACCCCAGTGGTGAGCATAGTGCCCGATAAGTGGTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENST00000435163.5 ENST00000437730.5 ENST00000439943.5 ENST00000442383.1 ENST00000655968.1 ENST00000656858.1 ENST00000660003.1 ENST00000664132.1 ENST00000671199.1 |
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| CDS CCA 72 bp | ATGCAAAGAAAGAGTGGCTGGAACAGTCCTAGGCCCTaGGCAGCCAATTTCCTCAAACCCAGTGGTATTTTC | + |
|
Preference number: 6 (lower is better) Translates to: MQRKSGWNSPRP*AANFLKPSGIF Trigger: GAAAATACCACTGGGTTTGAGGAAATTGGCTGCCCAGGGCCTAGGACTGTTCCAGCCACTCTTTCTTTGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656858.1 |
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| CDS CAA 72 bp | AACTCCTATGTAGGACTAAGAAGCATCTGGACAGGTTaGGGGGACAGTAGGATCCCACTTTCCCAAGCACAG | + |
|
Preference number: 6 (lower is better) Translates to: NSYVGLRSIWTG*GDSRIPLSQAQ Trigger: CTGTGCTTGGGAAAGTGGGATCCTACTGTCCCCCAAACCTGTCCAGATGCTTCTTAGTCCTACATAGGAGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000660638.1 |
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| CDS GCA 72 bp | TCCTTCTGCTGCAACTCCCCAAGTAACAGGAACAGGTaGAGCAATGGGCATTTACAATCAAGGGCCAAACAT | + |
|
Preference number: 6 (lower is better) Translates to: SFCCNSPSNRNR*SNGHLQSRAKH Trigger: ATGTTTGGCCCTTGATTGTAAATGCCCATTGCTGCACCTGTTCCTGTTACTTGGGGAGTTGCAGCAGAAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000435163.5 ENST00000437730.5 ENST00000439943.5 ENST00000442383.1 ENST00000655968.1 ENST00000656858.1 ENST00000660003.1 ENST00000664132.1 ENST00000671199.1 |
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| CDS GCA 72 bp | ATCAAAGTGTCCTGCCACCCAAGCAGTGGGCACATCTaGCAAGACAGGTGTAAAGGAGGATATTTCTTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: IKVSCHPSSGHI*QDRCKGGYFLR Trigger: TCTCAAGAAATATCCTCCTTTACACCTGTCTTGGCAGATGTGCCCACTGCTTGGGTGGCAGGACACTTTGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660638.1 |
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| CDS CAA 72 bp | TGTACTGCTCAGGAACTAAATCAGGTTCACCCCATTTaGGTAGGTTCCACCATAATCCGTAATGCCCGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: CTAQELNQVHPI*VGSTIIRNARG Trigger: TCCCCGGGCATTACGGATTATGGTGGAACCTACCAAAATGGGGTGAACCTGATTTAGTTCCTGAGCAGTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000660638.1 |
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| CDS CAA 72 bp | TCAACTGAGTATCCCAAAGACAAGACCGCCTTCAGCTaGCAATCAGAAAGACCTGGGCTCAAATCCGGCATA | + |
|
Preference number: 6 (lower is better) Translates to: STEYPKDKTAFS*QSERPGLKSGI Trigger: TATGCCGGATTTGAGCCCAGGTCTTTCTGATTGCAAGCTGAAGGCGGTCTTGTCTTTGGGATACTCAGTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660638.1 |
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| CDS GCA 72 bp | TGTATACAGAAAAGAAGTTTGCTTGGGTCACAGTTCTaGATGGCACCAGCATCTGCCTGGCTTCTAGTGAGT | + |
|
Preference number: 6 (lower is better) Translates to: CIQKRSLLGSQF*MAPASAWLLVS Trigger: ACTCACTAGAAGCCAGGCAGATGCTGGTGCCATGCAGAACTGTGACCCAAGCAAACTTCTTTTCTGTATACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660638.1 |
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| CDS CAA 72 bp | CTTTGTGGATGCACCAGTCCTGTACATACACTTCAGTaGTTTCTGATCTTTTGCTATTGCAGCCAATGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: LCGCTSPVHTLQ*FLIFCYCSQCC Trigger: GCAACATTGGCTGCAATAGCAAAAGATCAGAAACAACTGAAGTGTATGTACAGGACTGGTGCATCCACAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660193.1 |
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| CDS CAA 90 bp | ATCATCCACACCACCTTATCAGATCCTCAAAGCAATTCTTCTAAGTaGGTAGACCGGGGTAGTTATTTCCATTCTGCAAATGGGGAAACT | + |
|
Preference number: 6 (lower is better) Translates to: IIHTTLSDPQSNSSK*VDRGSYFHSANGET Trigger: AGTTTCCCCATTTGCAGAATGGAAATAACTACCCCGGTCTACCAACTTAGAAGAATTGCTTTGAGGATCTGATAAGGTGGTGTGGATGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENST00000435163.5 ENST00000437730.5 ENST00000439943.5 ENST00000442383.1 ENST00000655968.1 ENST00000656858.1 ENST00000660003.1 ENST00000664132.1 ENST00000671199.1 |
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| CDS TCA 72 bp | AGGGCATGCTGTCAAGCTTTGGGATTTCTGCCAATCTaGCAGGTTAAAAATGGTATCTCCGCATACTTTTTA | + |
|
Preference number: 6 (lower is better) Translates to: RACCQALGFLPI*QVKNGISAYFL Trigger: TAAAAAGTATGCGGAGATACCATTTTTAACCTGTCAGATTGGCAGAAATCCCAAAGCTTGACAGCATGCCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000660193.1 |
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| CDS CAA 90 bp | GCGCACACACAGCTTCCTCAAACTTTTTCCCAGTTATATAGTATTTaGCTTTGTGGATGCACCAGTCCTGTACATACACTTCAGTTGTTT | + |
|
Preference number: 6 (lower is better) Translates to: AHTQLPQTFSQLYSI*LCGCTSPVHTLQLF Trigger: AAACAACTGAAGTGTATGTACAGGACTGGTGCATCCACAAAGCAAAATACTATATAACTGGGAAAAAGTTTGAGGAAGCTGTGTGTGCGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000660193.1 |
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| CDS CAA 90 bp | AGTATTTTGCTTTGTGGATGCACCAGTCCTGTACATACACTTCAGTaGTTTCTGATCTTTTGCTATTGCAGCCAATGTTGCAATGGATCA | + |
|
Preference number: 6 (lower is better) Translates to: SILLCGCTSPVHTLQ*FLIFCYCSQCCNGS Trigger: TGATCCATTGCAACATTGGCTGCAATAGCAAAAGATCAGAAACAACTGAAGTGTATGTACAGGACTGGTGCATCCACAAAGCAAAATACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000660193.1 |
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| CDS CAA 90 bp | GAATCAATGGGAGCCATTGCCTGGCTCTGTTTTAAATTAGATTTCTaGAGTCTGTGGACATTAGTGTTAAAATGTGACTTCGTTGAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: ESMGAIAWLCFKLDF*SLWTLVLKCDFVEA Trigger: TGCCTCAACGAAGTCACATTTTAACACTAATGTCCACAGACTCAAGAAATCTAATTTAAAACAGAGCCAGGCAATGGCTCCCATTGATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000660638.1 |
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| CDS GCA 72 bp | AGGGGAAATACATACAAAAGACCTGAGAGGGAAATATaGCTGCTGGGTTCAAATATATGCAAAGAAAGAGTG | + |
|
Preference number: 6 (lower is better) Translates to: RGNTYKRPEREI*LLGSNICKERV Trigger: CACTCTTTCTTTGCATATATTTGAACCCAGCAGGCATATTTCCCTCTCAGGTCTTTTGTATGTATTTCCCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000656858.1 |
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| CDS CAA 72 bp | ACCACCTTATCAGATCCTCAAAGCAATTCTTCTAAGTaGGTAGACCGGGGTAGTTATTTCCATTCTGCAAAT | + |
|
Preference number: 6 (lower is better) Translates to: TTLSDPQSNSSK*VDRGSYFHSAN Trigger: ATTTGCAGAATGGAAATAACTACCCCGGTCTACCAACTTAGAAGAATTGCTTTGAGGATCTGATAAGGTGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000435163.5 ENST00000437730.5 ENST00000439943.5 ENST00000442383.1 ENST00000655968.1 ENST00000656858.1 ENST00000660003.1 ENST00000664132.1 ENST00000671199.1 |
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| CDS CAA 72 bp | GTTGAGAACTTTCCTTTGAAGCAATTTATTAGTGTGTaGCCGGAGACTTTAAACGGTTTATACCTTCCCACC | + |
|
Preference number: 6 (lower is better) Translates to: VENFPLKQFISV*PETLNGLYLPT Trigger: GGTGGGAAGGTATAAACCGTTTAAAGTCTCCGGCAACACACTAATAAATTGCTTCAAAGGAAAGTTCTCAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000437730.5 ENST00000623343.1 |
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| CDS CAA 72 bp | GGAATCCCCGTTCTACCACTTACAAACTATGTAACCTaGGACAAGTTATCTAACTATTCTGAGCCTAGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: GIPVLPLTNYVT*DKLSNYSEPSF Trigger: GAAACTAGGCTCAGAATAGTTAGATAACTTGTCCAAGGTTACATAGTTTGTAAGTGGTAGAACGGGGATTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656858.1 |
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| CDS GCA 72 bp | AGCTTCCTCAAACTTTTTCCCAGTTATATAGTATTTTaGTTTGTGGATGCACCAGTCCTGTACATACACTTC | + |
|
Preference number: 6 (lower is better) Translates to: SFLKLFPSYIVF*FVDAPVLYIHF Trigger: GAAGTGTATGTACAGGACTGGTGCATCCACAAAGCAAAATACTATATAACTGGGAAAAAGTTTGAGGAAGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000660193.1 |
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| CDS CCA 72 bp | GCCTGGCTCTGTTTTAAATTAGATTTCTTGAGTCTGTaGACATTAGTGTTAAAATGTGACTTCGTTGAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: AWLCFKLDFLSL*TLVLKCDFVEA Trigger: TGCCTCAACGAAGTCACATTTTAACACTAATGTCCACAGACTCAAGAAATCTAATTTAAAACAGAGCCAGGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000660638.1 |
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| CDS CAA 72 bp | CAGTCCTGTACATACACTTCAGTTGTTTCTGATCTTTaGCTATTGCAGCCAATGTTGCAATGGATCATCTTT | + |
|
Preference number: 6 (lower is better) Translates to: QSCTYTSVVSDL*LLQPMLQWIIF Trigger: AAAGATGATCCATTGCAACATTGGCTGCAATAGCAAAAGATCAGAAACAACTGAAGTGTATGTACAGGACTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660193.1 |
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| CDS CAA 72 bp | CAGCTTCCTCAAACTTTTTCCCAGTTATATAGTATTTaGCTTTGTGGATGCACCAGTCCTGTACATACACTT | + |
|
Preference number: 6 (lower is better) Translates to: QLPQTFSQLYSI*LCGCTSPVHTL Trigger: AAGTGTATGTACAGGACTGGTGCATCCACAAAGCAAAATACTATATAACTGGGAAAAAGTTTGAGGAAGCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000660193.1 |
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| CDS CAA 72 bp | GGCCCCCAACCACTTCCTGAAACACTTCTTAGTTACTaGTCTAGCTTATCAGTTTTTCTTTATGAAGATAGA | + |
|
Preference number: 6 (lower is better) Translates to: GPQPLPETLLSY*SSLSVFLYEDR Trigger: TCTATCTTCATAAAGAAAAACTGATAAGCTAGACAAGTAACTAAGAAGTGTTTCAGGAAGTGGTTGGGGGCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000660193.1 |
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| CDS GCA 72 bp | ACTTTTTCCCAGTTATATAGTATTTTGCTTTGTGGATaGACCAGTCCTGTACATACACTTCAGTTGTTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: TFSQLYSILLCG*TSPVHTLQLFL Trigger: CAGAAACAACTGAAGTGTATGTACAGGACTGGTGCATCCACAAAGCAAAATACTATATAACTGGGAAAAAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000660193.1 |
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| CDS CAA 90 bp | CACCAGTCCTGTACATACACTTCAGTTGTTTCTGATCTTTTGCTATaGCAGCCAATGTTGCAATGGATCATCTTTTACATAAATTATTAC | + |
|
Preference number: 6 (lower is better) Translates to: HQSCTYTSVVSDLLL*QPMLQWIIFYINYY Trigger: GTAATAATTTATGTAAAAGATGATCCATTGCAACATTGGCTGCAATAGCAAAAGATCAGAAACAACTGAAGTGTATGTACAGGACTGGTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000660193.1 |
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| CDS TCA 72 bp | GGAATAGTTTGTGACATAAAAACGCTAATAGTAAATTaGAGGAAAGCAGGATATAACACGTATGCCCAGTGT | + |
|
Preference number: 6 (lower is better) Translates to: GIVCDIKTLIVN*RKAGYNTYAQC Trigger: ACACTGGGCATACGTGTTATATCCTGCTTTCCTTCAATTTACTATTAGCGTTTTTATGTCACAAACTATTCC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000660638.1 |
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