RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OSBPL7 (Homo sapiens)

Ensembl gene IDs: ENSG00000006025

Ensembl transcript IDs: ENST00000007414.8, ENST00000392507.7, ENST00000578461.1, ENST00000579728.5, ENST00000580140.5, ENST00000580226.5, ENST00000580808.1, ENST00000583167.5, ENST00000584698.1, ENST00000585051.1, ENST00000613735.4

Found 894 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGACAGGTGCCTTaGGCTGCTCCCCTCCTCATGGAGAGGCCTCCTCCACTCTGGGGG +
Preference number: 1 (lower is better)
Translates to: SHLRTRCRWVRGQVP*AAPLLMERPPPLWG
Trigger: CCCCCAGAGTGGAGGAGGCCTCTCCATGAGGAGGGGAGCAGCCCAAGGCACCTGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTGTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
3UTR CCA 90 bp GTGGGTCCCCGGTACAGCCCCTCGTGCCACTTCCCAAAGAGTCGGTaGAGGACACGGCCACTCCGACTGAGCACAGCGCCCTGCACCTCG +
Preference number: 1 (lower is better)
Translates to: VGPRYSPSCHFPKSR*RTRPLRLSTAPCTS
Trigger: CGAGGTGCAGGGCGCTGTGCTCAGTCGGAGTGGCCGTGTCCTCCACCGACTCTTTGGGAAGTGGCACGAGGGGCTGTACCGGGGACCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579728.5
3UTR CCA 90 bp TCCGCCGTGGTGTCGGAGGAGGTGGACAGTGAGTGGAGGCGCCTCTaGCCAGTGGAGGCCTCAGAGACCTGCAGGGAGAGGGTGAGGGAC +
Preference number: 1 (lower is better)
Translates to: SAVVSEEVDSEWRRL*PVEASETCRERVRD
Trigger: GTCCCTCACCCTCTCCCTGCAGGTCTCTGAGGCCTCCACTGGCCAGAGGCGCCTCCACTCACTGTCCACCTCCTCCGACACCACGGCGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613735.4
3UTR GCA 90 bp CAGATGCACTGGCCACCTGGCGTGGGTCCCCGGTACAGCCCCTCGTaGCACTTCCCAAAGAGTCGGTGGAGGACACGGCCACTCCGACTG +
Preference number: 1 (lower is better)
Translates to: QMHWPPGVGPRYSPS*HFPKSRWRTRPLRL
Trigger: CAGTCGGAGTGGCCGTGTCCTCCACCGACTCTTTGGGAAGTGGCACGAGGGGCTGTACCGGGGACCCACGCCAGGTGGCCAGTGCATCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579728.5
3UTR TCA 90 bp GAGGGAGCTGAAAGAGTCCGCCGTGGTGTCGGAGGAGGTGGACAGTaGGTGGAGGCGCCTCTGGCCAGTGGAGGCCTCAGAGACCTGCAG +
Preference number: 1 (lower is better)
Translates to: EGAERVRRGVGGGGQ*VEAPLASGGLRDLQ
Trigger: CTGCAGGTCTCTGAGGCCTCCACTGGCCAGAGGCGCCTCCACTCACTGTCCACCTCCTCCGACACCACGGCGGACTCTTTCAGCTCCCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613735.4
3UTR CCA 90 bp GAGCTGAAAGAGTCCGCCGTGGTGTCGGAGGAGGTGGACAGTGAGTaGAGGCGCCTCTGGCCAGTGGAGGCCTCAGAGACCTGCAGGGAG +
Preference number: 1 (lower is better)
Translates to: ELKESAVVSEEVDSE*RRLWPVEASETCRE
Trigger: CTCCCTGCAGGTCTCTGAGGCCTCCACTGGCCAGAGGCGCCTCCACTCACTGTCCACCTCCTCCGACACCACGGCGGACTCTTTCAGCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613735.4
3UTR TCA 90 bp CCTCCTCATGGAGAGGCCTCCTCCACTCTGGGGGATCCGCTGAGCTaGGACGGGAGGGAACCGCTTGAGGATCAGGGACGAAGGAGCTGG +
Preference number: 1 (lower is better)
Translates to: PPHGEASSTLGDPLS*DGREPLEDQGRRSW
Trigger: CCAGCTCCTTCGTCCCTGATCCTCAAGCGGTTCCCTCCCGTCTCAGCTCAGCGGATCCCCCAGAGTGGAGGAGGCCTCTCCATGAGGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
3UTR GCA 90 bp TACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGACAGGTaGCTTGGGCTGCTCCCCTCCTCATGGAGAGGCCTCCTCCACTCT +
Preference number: 1 (lower is better)
Translates to: YTHTCALAAGGSEDR*LGLLPSSWRGLLHS
Trigger: AGAGTGGAGGAGGCCTCTCCATGAGGAGGGGAGCAGCCCAAGGCACCTGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
3UTR CCA 90 bp GGGCCAGGGCTACCAGAGCACGGCCCCATCCATGTTCCCATAGCCTaGCTCGGCCCGCAGCCTCCAGTAGGTATTGTTGGTCACCCACCA +
Preference number: 1 (lower is better)
Translates to: GPGLPEHGPIHVPIA*LGPQPPVGIVGHPP
Trigger: TGGTGGGTGACCAACAATACCTACTGGAGGCTGCGGGCCGAGCCAGGCTATGGGAACATGGATGGGGCCGTGCTCTGGTAGCCCTGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578461.1
ENST00000579728.5
ENST00000613735.4
3UTR TCA 90 bp TCAGAGACCTGCAGGGAGAGGGTGAGGGACACGGTGCCAGGAGGATaGGGTCCTCCCCACCTTGCCGCATCTCTGCAGAGACTGCCTCTG +
Preference number: 1 (lower is better)
Translates to: SETCRERVRDTVPGG*GPPHLAASLQRLPL
Trigger: CAGAGGCAGTCTCTGCAGAGATGCGGCAAGGTGGGGAGGACCTCATCCTCCTGGCACCGTGTCCCTCACCCTCTCCCTGCAGGTCTCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613735.4
3UTR TCA 90 bp CGTGCCACTTCCCAAAGAGTCGGTGGAGGACACGGCCACTCCGACTaGGCACAGCGCCCTGCACCTCGTGGACATTGGAACTCCAGTACT +
Preference number: 1 (lower is better)
Translates to: RATSQRVGGGHGHSD*AQRPAPRGHWNSST
Trigger: AGTACTGGAGTTCCAATGTCCACGAGGTGCAGGGCGCTGTGCTCAGTCGGAGTGGCCGTGTCCTCCACCGACTCTTTGGGAAGTGGCACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579728.5
3UTR GCA 90 bp GGCAGAAGGGGAGGGAGAACAGATCACCTCCTCTCCTTCACTCACTaGAACCTCACCGCTGGGGACAGAGGCCTGGGCACAGAAAGCCTG +
Preference number: 1 (lower is better)
Translates to: GRRGGRTDHLLSFTH*NLTAGDRGLGTESL
Trigger: CAGGCTTTCTGTGCCCAGGCCTCTGTCCCCAGCGGTGAGGTTGCAGTGAGTGAAGGAGAGGAGGTGATCTGTTCTCCCTCCCCTTCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
3UTR CCA 90 bp TCCCCTCCTCCAGGTACCTCTGGTCTGGCCGGAGTCTCGTGTCGGTaGAAGGCAGCGACCGTTTCAGCTCTGCTGTCAGCTCATTCAGCT +
Preference number: 1 (lower is better)
Translates to: SPPPGTSGLAGVSCR*KAATVSALLSAHSA
Trigger: AGCTGAATGAGCTGACAGCAGAGCTGAAACGGTCGCTGCCTTCCACCGACACGAGACTCCGGCCAGACCAGAGGTACCTGGAGGAGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
3UTR CCA 90 bp GCAGGCATTTTGCAGTTAGGGAGAAGGGATCCAGGACAGGAGGGATaGCCAGGGACTAACCAAAGGGAGCTGGAGAAGGCCCTGCAGGGC +
Preference number: 1 (lower is better)
Translates to: AGILQLGRRDPGQEG*PGTNQRELEKALQG
Trigger: GCCCTGCAGGGCCTTCTCCAGCTCCCTTTGGTTAGTCCCTGGCCATCCCTCCTGTCCTGGATCCCTTCTCCCTAACTGCAAAATGCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
3UTR CCA 90 bp ATGACTTTGCGCCTGTCTCGCTGCAGCTGCTCGATCCTTCTCTTCTaGGCCTCAGCGGCCTGTATGTTCCCCTCCTCCAGGTACCTCTGG +
Preference number: 1 (lower is better)
Translates to: MTLRLSRCSCSILLF*ASAACMFPSSRYLW
Trigger: CCAGAGGTACCTGGAGGAGGGGAACATACAGGCCGCTGAGGCCCAGAAGAGAAGGATCGAGCAGCTGCAGCGAGACAGGCGCAAAGTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578461.1
ENST00000579728.5
ENST00000613735.4
3UTR GCA 90 bp TGGCCGGAGTCTCGTGTCGGTGGAAGGCAGCGACCGTTTCAGCTCTaGTGTCAGCTCATTCAGCTCCAAGGCAAACTGGGTGAAGCCGAA +
Preference number: 1 (lower is better)
Translates to: WPESRVGGRQRPFQL*CQLIQLQGKLGEAE
Trigger: TTCGGCTTCACCCAGTTTGCCTTGGAGCTGAATGAGCTGACAGCAGAGCTGAAACGGTCGCTGCCTTCCACCGACACGAGACTCCGGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
3UTR CCA 90 bp TGGAGGACACGGCCACTCCGACTGAGCACAGCGCCCTGCACCTCGTaGACATTGGAACTCCAGTACTTGGCCTTGCAGAAGGTGATCTTG +
Preference number: 1 (lower is better)
Translates to: WRTRPLRLSTAPCTS*TLELQYLALQKVIL
Trigger: CAAGATCACCTTCTGCAAGGCCAAGTACTGGAGTTCCAATGTCCACGAGGTGCAGGGCGCTGTGCTCAGTCGGAGTGGCCGTGTCCTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579728.5
3UTR GCA 90 bp ACGATGTTGTTTTCCTCCATGACTTTGCGCCTGTCTCGCTGCAGCTaGTCGATCCTTCTCTTCTGGGCCTCAGCGGCCTGTATGTTCCCC +
Preference number: 1 (lower is better)
Translates to: TMLFSSMTLRLSRCS*SILLFWASAACMFP
Trigger: GGGGAACATACAGGCCGCTGAGGCCCAGAAGAGAAGGATCGAGCAGCTGCAGCGAGACAGGCGCAAAGTCATGGAGGAAAACAACATCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578461.1
ENST00000579728.5
ENST00000613735.4
3UTR GCA 90 bp TGGTGTACGATGTTGTTTTCCTCCATGACTTTGCGCCTGTCTCGCTaGAGCTGCTCGATCCTTCTCTTCTGGGCCTCAGCGGCCTGTATG +
Preference number: 1 (lower is better)
Translates to: WCTMLFSSMTLRLSR*SCSILLFWASAACM
Trigger: CATACAGGCCGCTGAGGCCCAGAAGAGAAGGATCGAGCAGCTGCAGCGAGACAGGCGCAAAGTCATGGAGGAAAACAACATCGTACACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578461.1
ENST00000579728.5
ENST00000613735.4
3UTR CCA 90 bp GGAATCGGAATGGTGAAGCGGGAAGGGTCTTACATGCTGGTTGTCTaGGGCAAGGAGACTGGGGAAGCACAGATTCTGCTTCTCACCCCA +
Preference number: 1 (lower is better)
Translates to: GIGMVKREGSYMLVV*GKETGEAQILLLTP
Trigger: TGGGGTGAGAAGCAGAATCTGTGCTTCCCCAGTCTCCTTGCCCCAGACAACCAGCATGTAAGACCCTTCCCGCTTCACCATTCCGATTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR CCA 90 bp AGGGAGCCCTGCTTGCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCACAGGCCGGGCAGACTaGGCCTCCCCCGGGCAGCTG +
Preference number: 2 (lower is better)
Translates to: REPCLPASRAQAHTHTLSTGRAD*ASPGQL
Trigger: CAGCTGCCCGGGGGAGGCCCAGTCTGCCCGGCCTGT...GGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGCAAGCAGGGCTCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579728.5
3UTR-3UTR TCA 90 bp GCAGACTGTGAGAAAGAGCAGCGATGTGGTGGACCCCCAGCAGGGGGAAGGCGGTGGTCTCAAGGGCAGTaGGGCGGGGAGCCCGGCCTC +
Preference number: 2 (lower is better)
Translates to: ADCEKEQRCGGPPAGGRRWSQGQ*GGEPGL
Trigger: GAGGCCGGGCTCCCCGCCTCACTGCCCTTGAGACCA...CCGCCTTCCCCCTGCTGGGGGTCCACCACATCGCTGCTCTTTCTCACAGTCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR TCA 90 bp TTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGACAGGTGCCTTGGTGGTCTCAAGGGCAGTaGGGCGGGGAGCCCGGCCTC +
Preference number: 2 (lower is better)
Translates to: LHSHLRTRCRWVRGQVPWWSQGQ*GGEPGL
Trigger: GAGGCCGGGCTCCCCGCCTCACTGCCCTTGAGACCA...CCAAGGCACCTGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR TCA 90 bp GAGGGAGCCCTGCTTGCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCGGGTTGGGGGTGGGCTaGGATGCAGACCCTCTGGCC +
Preference number: 2 (lower is better)
Translates to: EGALLACKQGTGAHAYTLGLGVG*DADPLA
Trigger: GGCCAGAGGGTCTGCATCTCAGCCCACCCCCAACCC...GAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGCAAGCAGGGCTCCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR TCA 90 bp CAGACTGTGAGAAAGAGCAGCGATGTGGTGGACCCCCAGCAGGGGGAAGGCGGGCTGGGCCAGGACAGATaGCAGGCCGGGCAGACTGGG +
Preference number: 2 (lower is better)
Translates to: QTVRKSSDVVDPQQGEGGLGQDR*QAGQTG
Trigger: CCCAGTCTGCCCGGCCTGTCATCTGTCCTGGCCCAG...CCCGCCTTCCCCCTGCTGGGGGTCCACCACATCGCTGCTCTTTCTCACAGTCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000579728.5
3UTR-3UTR GCA 90 bp GCCAGGGCTACCAGAGCACGGCCCCATCCATGTTCCCATAGCCTGGCTCGGCCCCCGCTGCTATCCGTCTaGCGCCTGAAGAAGCGAGCC +
Preference number: 2 (lower is better)
Translates to: ARATRARPHPCSHSLARPPLLSV*RLKKRA
Trigger: GGCTCGCTTCTTCAGGCGGCAGACGGATAGCAGCGG...GGGCCGAGCCAGGCTATGGGAACATGGATGGGGCCGTGCTCTGGTAGCCCTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000578461.1
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR GCA 90 bp ACTGATGAAGCGGAAGCCTCGGTCAGGCCGCTCACACTCGTAGGTCTCCCCCAGGGAACCAGAGCCTCCTaGCCCCGGGGCCAGGGCTAC +
Preference number: 2 (lower is better)
Translates to: TDEAEASVRPLTLVGLPQGTRAS*PRGQGY
Trigger: GTAGCCCTGGCCCCGGGGGCAGGAGGCTCTGGTTCC...CTGGGGGAGACCTACGAGTGTGAGCGGCCTGACCGAGGCTTCCGCTTCATCAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000579728.5
3UTR-3UTR GCA 90 bp TGTTCCCATAGCCTGGCTCGGCCCGCAGCCTCCAGTAGGTATTGTTGGTCACCCGGAACCAGAGCCTCCTaGCCCCGGGGCCAGGGCTAC +
Preference number: 2 (lower is better)
Translates to: CSHSLARPAASSRYCWSPGTRAS*PRGQGY
Trigger: GTAGCCCTGGCCCCGGGGGCAGGAGGCTCTGGTTCC...GGGTGACCAACAATACCTACTGGAGGCTGCGGGCCGAGCCAGGCTATGGGAACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000578461.1
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR GCA 90 bp GCACAGAAAGCCTGGGGAGCGTCAAGGAGTCCCCTGTGTCCTAGGAAGGCACTGCGCAGGGGTCGGCGATaGGGCTGGCCTGGTCCAGGA +
Preference number: 2 (lower is better)
Translates to: AQKAWGASRSPLCPRKALRRGRR*GWPGPG
Trigger: TCCTGGACCAGGCCAGCCGCATCGCCGACCCCTGCG...CAGTGCCTTCCTAGGACACAGGGGACTCCTTGACGCTCCCCAGGCTTTCTGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000579728.5
3UTR-3UTR CCA 90 bp GGCCTCAGCGGCCTGTATGTTCCCCTCCTCCAGGTACCTCTGGTCTGGCCGGAGTCTCACCCCAAACGGTaGGGTTGGGGGTGGGCTGAG +
Preference number: 2 (lower is better)
Translates to: GLSGLYVPLLQVPLVWPESHPKR*GWGWAE
Trigger: CTCAGCCCACCCCCAACCCCACCGTTTGGGGTGAGA...CTCCGGCCAGACCAGAGGTACCTGGAGGAGGGGAACATACAGGCCGCTGAGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR CCA 90 bp GCAGACTGTGAGAAAGAGCAGCGATGTGGTGGACCCCCAGCAGGGGGAAGGCGGCTGCAACCTCACCGCTaGGGACAGAGGCCTGGGCAC +
Preference number: 2 (lower is better)
Translates to: ADCEKEQRCGGPPAGGRRLQPHR*GQRPGH
Trigger: GTGCCCAGGCCTCTGTCCCCAGCGGTGAGGTTGCAG...CCGCCTTCCCCCTGCTGGGGGTCCACCACATCGCTGCTCTTTCTCACAGTCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR TCA 90 bp AGGGAGCCCTGCTTGCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCTGGAGGCAGGAGGAGTaGGGAACCAGAGCCTCCTGC +
Preference number: 2 (lower is better)
Translates to: REPCLPASRAQAHTHTLSWRQEE*GTRASC
Trigger: GCAGGAGGCTCTGGTTCCTCACTCCTCCTGCCTCCA...GGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGCAAGCAGGGCTCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR TCA 90 bp TTGCGCCTGTCTCGCTGCAGCTGCTCGATCCTTCTCTTCTGGGCCTCAGCGGCCTGGAGGCAGGAGGAGTaGGGAACCAGAGCCTCCTGC +
Preference number: 2 (lower is better)
Translates to: LRLSRCSCSILLFWASAAWRQEE*GTRASC
Trigger: GCAGGAGGCTCTGGTTCCTCACTCCTCCTGCCTCCA...GGCCGCTGAGGCCCAGAAGAGAAGGATCGAGCAGCTGCAGCGAGACAGGCGCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578461.1
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR GCA 90 bp GAGCCCTGCTTGCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCTACGGGGGTGGGCTGAGATaGAGACCCTCTGGCCAGCAG +
Preference number: 2 (lower is better)
Translates to: EPCLPASRAQAHTHTLSYGGGLR*RPSGQQ
Trigger: CTGCTGGCCAGAGGGTCTGCATCTCAGCCCACCCCC...GTAGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGCAAGCAGGGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR CCA 90 bp AGGGAGCCCTGCTTGCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCCTGGGGACAGAGGCCTaGGCACAGAAAGCCTGGGGA +
Preference number: 2 (lower is better)
Translates to: REPCLPASRAQAHTHTLSLGTEA*AQKAWG
Trigger: TCCCCAGGCTTTCTGTGCCCAGGCCTCTGTCCCCAG...GGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGCAAGCAGGGCTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR CCA 90 bp TTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGACAGGTGCCTTGGCGCACTCGCTGCCGGTaGGTCAGAGGACAGGTGCCT +
Preference number: 2 (lower is better)
Translates to: LHSHLRTRCRWVRGQVPWRTRCR*VRGQVP
Trigger: AGGCACCTGTCCTCTGACCCACCGGCAGCGAGTGCG...CCAAGGCACCTGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR CCA 90 bp AGGGAGCCCTGCTTGCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCGGTTTCCAGATGCACTaGCCACCTGGCGTGGGTCCC +
Preference number: 2 (lower is better)
Translates to: REPCLPASRAQAHTHTLSGFQMH*PPGVGP
Trigger: GGGACCCACGCCAGGTGGCCAGTGCATCTGGAAACC...GGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGCAAGCAGGGCTCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR TCA 90 bp GGAGCCCTGCTTGCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCTATGGAGGCAGGAGGAGTaGGGAACCAGAGCCTCCTGC +
Preference number: 2 (lower is better)
Translates to: GALLACKQGTGAHAYTLLWRQEE*GTRASC
Trigger: GCAGGAGGCTCTGGTTCCTCACTCCTCCTGCCTCCA...TAGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGCAAGCAGGGCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR TCA 90 bp AACTTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGACAGGTGCCTGGGGATCCGCTGAGCTaGGACGGGAGGGAACCGCTT +
Preference number: 2 (lower is better)
Translates to: NLHSHLRTRCRWVRGQVPGDPLS*DGREPL
Trigger: AAGCGGTTCCCTCCCGTCTCAGCTCAGCGGATCCCC...AGGCACCTGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR TCA 90 bp GGGGAGGGAGAACAGATCACCTCCTCTCCTTCACTCACTGCAACCTCACCGCTGCCCCCAGGACAGGGTTaGAGGGCTTGCAGCCGGCTC +
Preference number: 2 (lower is better)
Translates to: GEGEQITSSPSLTATSPLPPGQG*RACSRL
Trigger: GAGCCGGCTGCAAGCCCTTCAACCCTGTCCTGGGGG...CAGCGGTGAGGTTGCAGTGAGTGAAGGAGAGGAGGTGATCTGTTCTCCCTCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579728.5
3UTR-3UTR GCA 90 bp GAGGGAGCCCTGCTTGCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCACTTACACTCACACCTaGGCACTCGCTGCCGGTGGG +
Preference number: 2 (lower is better)
Translates to: EGALLACKQGTGAHAYTLTYTHT*ALAAGG
Trigger: CCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAGT...GAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGCAAGCAGGGCTCCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR CCA 90 bp GAGGCAGACTGTGAGAAAGAGCAGCGATGTGGTGGACCCCCAGCAGGGGGAAGGCTGGGGACAGAGGCCTaGGCACAGAAAGCCTGGGGA +
Preference number: 2 (lower is better)
Translates to: EADCEKEQRCGGPPAGGRLGTEA*AQKAWG
Trigger: TCCCCAGGCTTTCTGTGCCCAGGCCTCTGTCCCCAG...CCTTCCCCCTGCTGGGGGTCCACCACATCGCTGCTCTTTCTCACAGTCTGCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR CCA 90 bp TCAGAGGCAGACTGTGAGAAAGAGCAGCGATGTGGTGGACCCCCAGCAGGGGGACTGCAACCTCACCGCTaGGGACAGAGGCCTGGGCAC +
Preference number: 2 (lower is better)
Translates to: SEADCEKEQRCGGPPAGGLQPHR*GQRPGH
Trigger: GTGCCCAGGCCTCTGTCCCCAGCGGTGAGGTTGCAG...TCCCCCTGCTGGGGGTCCACCACATCGCTGCTCTTTCTCACAGTCTGCCTCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR TCA 90 bp CCCAAGTACCCCAAAGGGGACAGGAATCGGAATGGTGAAGCGGGAAGGGTCTTATGGTCTCAAGGGCAGTaGGGCGGGGAGCCCGGCCTC +
Preference number: 2 (lower is better)
Translates to: PKYPKGDRNRNGEAGRVLWSQGQ*GGEPGL
Trigger: GAGGCCGGGCTCCCCGCCTCACTGCCCTTGAGACCA...TAAGACCCTTCCCGCTTCACCATTCCGATTCCTGTCCCCTTTGGGGTACTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR TCA 90 bp AACTTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGACAGGTGCCTCGGGAGGGAACCGCTTaGGGATCAGGGACGAAGGAG +
Preference number: 2 (lower is better)
Translates to: NLHSHLRTRCRWVRGQVPREGTA*GSGTKE
Trigger: CTCCTTCGTCCCTGATCCTCAAGCGGTTCCCTCCCG...AGGCACCTGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR GCA 90 bp TTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGACAGGTGCCTTGGACTTACACTCACACCTaGGCACTCGCTGCCGGTGGG +
Preference number: 2 (lower is better)
Translates to: LHSHLRTRCRWVRGQVPWTYTHT*ALAAGG
Trigger: CCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAGT...CCAAGGCACCTGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR GCA 90 bp GGAGCCCTGCTTGCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCTACGGTACAGCCCCTCGTaGCACTTCCCAAAGAGTCGG +
Preference number: 2 (lower is better)
Translates to: GALLACKQGTGAHAYTLLRYSPS*HFPKSR
Trigger: CCGACTCTTTGGGAAGTGGCACGAGGGGCTGTACCG...TAGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGCAAGCAGGGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579728.5
3UTR-3UTR CCA 90 bp GGAGCCCTGCTTGCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCTACTAACCAAAGGGAGCTaGAGAAGGCCCTGCAGGGCC +
Preference number: 2 (lower is better)
Translates to: GALLACKQGTGAHAYTLLLTKGS*RRPCRA
Trigger: GGCCCTGCAGGGCCTTCTCCAGCTCCCTTTGGTTAG...TAGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGCAAGCAGGGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR CCA 90 bp AGGGAGCCCTGCTTGCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCCCAGGACAGGAGGGATaGCCAGGGACTAACCAAAGG +
Preference number: 2 (lower is better)
Translates to: REPCLPASRAQAHTHTLSPGQEG*PGTNQR
Trigger: CCTTTGGTTAGTCCCTGGCCATCCCTCCTGTCCTGG...GGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGCAAGCAGGGCTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR CCA 90 bp TTCCCCTCCTCCAGGTACCTCTGGTCTGGCCGGAGTCTCGTGTCGGTGGAAGGCGGAGTCTCGTGTCGGTaGAAGGCAGCGACCGTTTCA +
Preference number: 2 (lower is better)
Translates to: FPSSRYLWSGRSLVSVEGGVSCR*KAATVS
Trigger: TGAAACGGTCGCTGCCTTCCACCGACACGAGACTCC...GCCTTCCACCGACACGAGACTCCGGCCAGACCAGAGGTACCTGGAGGAGGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578461.1
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR CCA 90 bp ATGGTGAAGCGGGAAGGGTCTTACATGCTGGTTGTCTGGGGCAAGGAGACTGGGGCAGCGACGGCGGGGTaGCCCCATGGGTCTCCCTTT +
Preference number: 2 (lower is better)
Translates to: MVKREGSYMLVVWGKETGAATAG*PHGSPF
Trigger: AAAGGGAGACCCATGGGGCCACCCCGCCGTCGCTGC...CCCAGTCTCCTTGCCCCAGACAACCAGCATGTAAGACCCTTCCCGCTTCACCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000579728.5
3UTR-3UTR TCA 90 bp CGGAATGGTGAAGCGGGAAGGGTCTTACATGCTGGTTGTCTGGGGCAAGGAGACGAAGGCGGGGCTACATaGGGGAGCCCTGCTTGCCTG +
Preference number: 2 (lower is better)
Translates to: RNGEAGRVLHAGCLGQGDEGGAT*GSPACL
Trigger: CAGGCAAGCAGGGCTCCCTCATGTAGCCCCGCCTTC...GTCTCCTTGCCCCAGACAACCAGCATGTAAGACCCTTCCCGCTTCACCATTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR TCA 90 bp AGCCGGCTCGGTGGTATGTGGAGGAGTAGGCCGAGACAGCAAAGGCTGCGATGTATGGGTCTCCCTTTCTaGCAGCGCTCAGCTCCCCTG +
Preference number: 2 (lower is better)
Translates to: SRLGGMWRSRPRQQRLRCMGLPF*QRSAPL
Trigger: CAGGGGAGCTGAGCGCTGTCAGAAAGGGAGACCCAT...ACATCGCAGCCTTTGCTGTCTCGGCCTACTCCTCCACATACCACCGAGCCGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579728.5
3UTR-3UTR GCA 90 bp GGCAGAAGGGGAGGGAGAACAGATCACCTCCTCTCCTTCACTCACTGCAACCTCAGGGAGGGCCAGGGCTaGCCCTTTGGTCTCAAGGGC +
Preference number: 2 (lower is better)
Translates to: GRRGGRTDHLLSFTHCNLREGQG*PFGLKG
Trigger: GCCCTTGAGACCAAAGGGGCAGCCCTGGCCCTCCCT...GAGGTTGCAGTGAGTGAAGGAGAGGAGGTGATCTGTTCTCCCTCCCCTTCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR GCA 90 bp CGGAATGGTGAAGCGGGAAGGGTCTTACATGCTGGTTGTCTGGGGCAAGGAGACGGGGGTGGGCTGAGATaGAGACCCTCTGGCCAGCAG +
Preference number: 2 (lower is better)
Translates to: RNGEAGRVLHAGCLGQGDGGGLR*RPSGQQ
Trigger: CTGCTGGCCAGAGGGTCTGCATCTCAGCCCACCCCC...GTCTCCTTGCCCCAGACAACCAGCATGTAAGACCCTTCCCGCTTCACCATTCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR GCA 90 bp GGCAGAAGGGGAGGGAGAACAGATCACCTCCTCTCCTTCACTCACTGCAACCTCGGGTCAGAGGACAGGTaGCTTGGGCTGCTCCCCTCC +
Preference number: 2 (lower is better)
Translates to: GRRGGRTDHLLSFTHCNLGSEDR*LGLLPS
Trigger: GGAGGGGAGCAGCCCAAGGCACCTGTCCTCTGACCC...GAGGTTGCAGTGAGTGAAGGAGAGGAGGTGATCTGTTCTCCCTCCCCTTCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR GCA 90 bp TGCTGGTTGTCTGGGGCAAGGAGACTGGGGAAGCACAGATTCTGCTTCTCACCCCACCTGCGCACTCGCTaGCGGTGGGTCAGAGGACAG +
Preference number: 2 (lower is better)
Translates to: CWLSGARRLGKHRFCFSPHLRTR*RWVRGQ
Trigger: CTGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTG...GGGTGAGAAGCAGAATCTGTGCTTCCCCAGTCTCCTTGCCCCAGACAACCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR CCA 90 bp GGGAGCCCTGCTTGCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCTCTGGGGCAAGGAGACTaGGGAAGCACAGATTCTGCT +
Preference number: 2 (lower is better)
Translates to: GSPACLQAGHRRTRIHSPLGQGD*GSTDSA
Trigger: AGCAGAATCTGTGCTTCCCCAGTCTCCTTGCCCCAG...AGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGCAAGCAGGGCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR CCA 90 bp TTCCCCTCCTCCAGGTACCTCTGGTCTGGCCGGAGTCTCGTGTCGGTGGAAGGCCAGGGACGAAGGAGCTaGAAGCTGCAGGCATTTTGC +
Preference number: 2 (lower is better)
Translates to: FPSSRYLWSGRSLVSVEGQGRRS*KLQAFC
Trigger: GCAAAATGCCTGCAGCTTCCAGCTCCTTCGTCCCTG...GCCTTCCACCGACACGAGACTCCGGCCAGACCAGAGGTACCTGGAGGAGGGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR CCA 90 bp GGGGAGGGAGAACAGATCACCTCCTCTCCTTCACTCACTGCAACCTCACCGCTGGAAAGAGCAGCGATGTaGTGGACCCCCAGCAGGGGG +
Preference number: 2 (lower is better)
Translates to: GEGEQITSSPSLTATSPLERAAM*WTPSRG
Trigger: CCCCCTGCTGGGGGTCCACCACATCGCTGCTCTTTC...CAGCGGTGAGGTTGCAGTGAGTGAAGGAGAGGAGGTGATCTGTTCTCCCTCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR CCA 90 bp CTACATGAACTTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGACAGAGTGGAGGCGCCTCTaGCCAGTGGAGGCCTCAGAG +
Preference number: 2 (lower is better)
Translates to: LHELTLTPAHSLPVGQRTEWRRL*PVEASE
Trigger: CTCTGAGGCCTCCACTGGCCAGAGGCGCCTCCACTC...TGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAGTTCATGTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613735.4
3UTR-3UTR TCA 90 bp CCCAAAGGGGACAGGAATCGGAATGGTGAAGCGGGAAGGGTCTTACATGCTGGTCTCTGGGGGATCCGCTaGGCTGAGACGGGAGGGAAC +
Preference number: 2 (lower is better)
Translates to: PKGDRNRNGEAGRVLHAGLWGIR*AETGGN
Trigger: GTTCCCTCCCGTCTCAGCTCAGCGGATCCCCCAGAG...ACCAGCATGTAAGACCCTTCCCGCTTCACCATTCCGATTCCTGTCCCCTTTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR TCA 90 bp CCCAAAGGGGACAGGAATCGGAATGGTGAAGCGGGAAGGGTCTTACATGCTGGTGAAGGCGGGGCTACATaGGGGAGCCCTGCTTGCCTG +
Preference number: 2 (lower is better)
Translates to: PKGDRNRNGEAGRVLHAGEGGAT*GSPACL
Trigger: CAGGCAAGCAGGGCTCCCTCATGTAGCCCCGCCTTC...ACCAGCATGTAAGACCCTTCCCGCTTCACCATTCCGATTCCTGTCCCCTTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR GCA 90 bp GGAAGGGTCTTACATGCTGGTTGTCTGGGGCAAGGAGACTGGGGAAGCACAGATAGGGAGGGCCAGGGCTaGCCCTTTGGTCTCAAGGGC +
Preference number: 2 (lower is better)
Translates to: GRVLHAGCLGQGDWGSTDREGQG*PFGLKG
Trigger: GCCCTTGAGACCAAAGGGGCAGCCCTGGCCCTCCCT...ATCTGTGCTTCCCCAGTCTCCTTGCCCCAGACAACCAGCATGTAAGACCCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR GCA 90 bp CGGAATGGTGAAGCGGGAAGGGTCTTACATGCTGGTTGTCTGGGGCAAGGAGACAGCTGGAGAAGGCCCTaGAGGGCCAGGGAAGGGGAA +
Preference number: 2 (lower is better)
Translates to: RNGEAGRVLHAGCLGQGDSWRRP*RAREGE
Trigger: TTCCCCTTCCCTGGCCCTGCAGGGCCTTCTCCAGCT...GTCTCCTTGCCCCAGACAACCAGCATGTAAGACCCTTCCCGCTTCACCATTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR GCA 90 bp GGCCTCAGCGGCCTGTATGTTCCCCTCCTCCAGGTACCTCTGGTCTGGCCGGAGGAAGGAGCTGGAAGCTaGAGGCATTTTGCAGTTAGG +
Preference number: 2 (lower is better)
Translates to: GLSGLYVPLLQVPLVWPEEGAGS*RHFAVR
Trigger: CCTAACTGCAAAATGCCTGCAGCTTCCAGCTCCTTC...CTCCGGCCAGACCAGAGGTACCTGGAGGAGGGGAACATACAGGCCGCTGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR GCA 90 bp GACAGGAGGGATGGCCAGGGACTAACCAAAGGGAGCTGGAGAAGGCCCTGCAGGCTGTCTCGCTGCAGCTaGTCGATCCTTCTCTTCTGG +
Preference number: 2 (lower is better)
Translates to: DRRDGQGLTKGSWRRPCRLSRCS*SILLFW
Trigger: CCAGAAGAGAAGGATCGAGCAGCTGCAGCGAGACAG...CCTGCAGGGCCTTCTCCAGCTCCCTTTGGTTAGTCCCTGGCCATCCCTCCTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR GCA 90 bp AACTTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGACAGGTGCCTAGGTCCTCCCCACCTTaGCGCATCTCTGCAGAGACT +
Preference number: 2 (lower is better)
Translates to: NLHSHLRTRCRWVRGQVPRSSPP*RISAET
Trigger: AGTCTCTGCAGAGATGCGGCAAGGTGGGGAGGACCT...AGGCACCTGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613735.4
3UTR-3UTR CCA 90 bp GCCCTGCTTGCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCTACATGGAGTCTCGTGTCGGTaGAAGGCAGCGACCGTTTCA +
Preference number: 2 (lower is better)
Translates to: ALLACKQGTGAHAYTLLHGVSCR*KAATVS
Trigger: TGAAACGGTCGCTGCCTTCCACCGACACGAGACTCC...ATGTAGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGCAAGCAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR CCA 90 bp GGCAGAAGGGGAGGGAGAACAGATCACCTCCTCTCCTTCACTCACTGCAACCTCTGGTGTCGGAGGAGGTaGACAGTGAGTGGAGGCGCC +
Preference number: 2 (lower is better)
Translates to: GRRGGRTDHLLSFTHCNLWCRRR*TVSGGA
Trigger: GGCGCCTCCACTCACTGTCCACCTCCTCCGACACCA...GAGGTTGCAGTGAGTGAAGGAGAGGAGGTGATCTGTTCTCCCTCCCCTTCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613735.4
3UTR-3UTR TCA 90 bp AAGCAGGGCACAGGCGCACACGCATACACTCTCCTACATGAACTTACACTCACAGGGTTGGGGGTGGGCTaGGATGCAGACCCTCTGGCC +
Preference number: 2 (lower is better)
Translates to: KQGTGAHAYTLLHELTLTGLGVG*DADPLA
Trigger: GGCCAGAGGGTCTGCATCTCAGCCCACCCCCAACCC...TGTGAGTGTAAGTTCATGTAGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR GCA 90 bp GAGGCAGACTGTGAGAAAGAGCAGCGATGTGGTGGACCCCCAGCAGGGGGAAGGGGGAAGCACAGATTCTaGTTCTCACCCCAAACGGTG +
Preference number: 2 (lower is better)
Translates to: EADCEKEQRCGGPPAGGRGKHRF*FSPQTV
Trigger: CACCGTTTGGGGTGAGAAGCAGAATCTGTGCTTCCC...CCTTCCCCCTGCTGGGGGTCCACCACATCGCTGCTCTTTCTCACAGTCTGCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR GCA 90 bp GGAACTCCAGTACTTGGCCTTGCAGAAGGTGATCTTGCAGTGGCAGGAGCTGTCCTGCGATGTACACCATaGGCTCGCAGGGGTCGGCGA +
Preference number: 2 (lower is better)
Translates to: GTPVLGLAEGDLAVAGAVLRCTP*ARRGRR
Trigger: TCGCCGACCCCTGCGAGCGCATGGTGTACATCGCAG...GACAGCTCCTGCCACTGCAAGATCACCTTCTGCAAGGCCAAGTACTGGAGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579728.5
3UTR-3UTR CCA 90 bp TCAGAGGCAGACTGTGAGAAAGAGCAGCGATGTGGTGGACCCCCAGCAGGGGGACTGGGGCAAGGAGACTaGGGAAGCACAGATTCTGCT +
Preference number: 2 (lower is better)
Translates to: SEADCEKEQRCGGPPAGGLGQGD*GSTDSA
Trigger: AGCAGAATCTGTGCTTCCCCAGTCTCCTTGCCCCAG...TCCCCCTGCTGGGGGTCCACCACATCGCTGCTCTTTCTCACAGTCTGCCTCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR CCA 90 bp GGTCTTACATGCTGGTTGTCTGGGGCAAGGAGACTGGGGAAGCACAGATTCTGCCTGGGGACAGAGGCCTaGGCACAGAAAGCCTGGGGA +
Preference number: 2 (lower is better)
Translates to: GLTCWLSGARRLGKHRFCLGTEA*AQKAWG
Trigger: TCCCCAGGCTTTCTGTGCCCAGGCCTCTGTCCCCAG...GCAGAATCTGTGCTTCCCCAGTCTCCTTGCCCCAGACAACCAGCATGTAAGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR CCA 90 bp TGTTCCCATAGCCTGGCTCGGCCCGCAGCCTCCAGTAGGTATTGTTGGTCACCCTCGATCCTTCTCTTCTaGGCCTCAGCGGCCTGTATG +
Preference number: 2 (lower is better)
Translates to: CSHSLARPAASSRYCWSPSILLF*ASAACM
Trigger: CATACAGGCCGCTGAGGCCCAGAAGAGAAGGATCGA...GGGTGACCAACAATACCTACTGGAGGCTGCGGGCCGAGCCAGGCTATGGGAACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578461.1
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR CCA 90 bp GCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCTACATGAACTTACAGAGGTGGACAGTGAGTaGAGGCGCCTCTGGCCAGTG +
Preference number: 2 (lower is better)
Translates to: ACKQGTGAHAYTLLHELTEVDSE*RRLWPV
Trigger: CACTGGCCAGAGGCGCCTCCACTCACTGTCCACCTC...TGTAAGTTCATGTAGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613735.4
3UTR CAA 90 bp CTGCTATCCGTCTGCCGCCTGAAGAAGCGAGCCTGGTGTACGATGTaGTTTTCCTCCATGACTTTGCGCCTGTCTCGCTGCAGCTGCTCG +
Preference number: 2 (lower is better)
Translates to: LLSVCRLKKRAWCTM*FSSMTLRLSRCSCS
Trigger: CGAGCAGCTGCAGCGAGACAGGCGCAAAGTCATGGAGGAAAACAACATCGTACACCAGGCTCGCTTCTTCAGGCGGCAGACGGATAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578461.1
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR TCA 90 bp ACAGGCGCACACGCATACACTCTCCTACATGAACTTACACTCACACCTGCGCACTGGAGGCAGGAGGAGTaGGGAACCAGAGCCTCCTGC +
Preference number: 2 (lower is better)
Translates to: TGAHAYTLLHELTLTPAHWRQEE*GTRASC
Trigger: GCAGGAGGCTCTGGTTCCTCACTCCTCCTGCCTCCA...GTGCGCAGGTGTGAGTGTAAGTTCATGTAGGAGAGTGTATGCGTGTGCGCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR TCA 90 bp TTTTCCTCCATGACTTTGCGCCTGTCTCGCTGCAGCTGCTCGATCCTTCTCTTCTGGAGGCAGGAGGAGTaGGGAACCAGAGCCTCCTGC +
Preference number: 2 (lower is better)
Translates to: FSSMTLRLSRCSCSILLFWRQEE*GTRASC
Trigger: GCAGGAGGCTCTGGTTCCTCACTCCTCCTGCCTCCA...GAAGAGAAGGATCGAGCAGCTGCAGCGAGACAGGCGCAAAGTCATGGAGGAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578461.1
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR TCA 90 bp TGGAATGTCATAGCAATTCGCCCTCATCAGAGGCAGACTGTGAGAAAGAGCAGCGGGTTGGGGGTGGGCTaGGATGCAGACCCTCTGGCC +
Preference number: 2 (lower is better)
Translates to: WNVIAIRPHQRQTVRKSSGLGVG*DADPLA
Trigger: GGCCAGAGGGTCTGCATCTCAGCCCACCCCCAACCC...GCTGCTCTTTCTCACAGTCTGCCTCTGATGAGGGCGAATTGCTATGACATTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR TCA 90 bp CCCATAGCCTGGCTCGGCCCGCAGCCTCCAGTAGGTATTGTTGGTCACCCACCATGTTGTTTTCCTCCATaGCTTTGCGCCTGTCTCGCT +
Preference number: 2 (lower is better)
Translates to: PIAWLGPQPPVGIVGHPPCCFPP*LCACLA
Trigger: AGCGAGACAGGCGCAAAGTCATGGAGGAAAACAACA...TGGTGGGTGACCAACAATACCTACTGGAGGCTGCGGGCCGAGCCAGGCTATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578461.1
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR TCA 90 bp GAGGCAGACTGTGAGAAAGAGCAGCGATGTGGTGGACCCCCAGCAGGGGGAAGGTGTTGTTTTCCTCCATaGCTTTGCGCCTGTCTCGCT +
Preference number: 2 (lower is better)
Translates to: EADCEKEQRCGGPPAGGRCCFPP*LCACLA
Trigger: AGCGAGACAGGCGCAAAGTCATGGAGGAAAACAACA...CCTTCCCCCTGCTGGGGGTCCACCACATCGCTGCTCTTTCTCACAGTCTGCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR TCA 90 bp CGCCTGAAGAAGCGAGCCTGGTGTACGATGTTGTTTTCCTCCATGACTTTGCGCAGCGCTCAGCTCCCCTaGGGTCCAGCATCTCCTCAG +
Preference number: 2 (lower is better)
Translates to: RLKKRAWCTMLFSSMTLRSAQLP*GPASPQ
Trigger: CTGAGGAGATGCTGGACCTCAGGGGAGCTGAGCGCT...GCGCAAAGTCATGGAGGAAAACAACATCGTACACCAGGCTCGCTTCTTCAGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579728.5
3UTR-3UTR TCA 90 bp GGGGAGGGAGAACAGATCACCTCCTCTCCTTCACTCACTGCAACCTCACCGCTGCCTGTGTGTTTCGGATaGGCACCTCCCCATAGTGCT +
Preference number: 2 (lower is better)
Translates to: GEGEQITSSPSLTATSPLPVCFG*APPHSA
Trigger: AGCACTATGGGGAGGTGCTCATCCGAAACACACAGG...CAGCGGTGAGGTTGCAGTGAGTGAAGGAGAGGAGGTGATCTGTTCTCCCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579728.5
3UTR-3UTR GCA 90 bp ACTCTCCTACATGAACTTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGCTCTCCTTCACTCACTaGAACCTCACCGCTGGGGAC +
Preference number: 2 (lower is better)
Translates to: TLLHELTLTPAHSLPVGQLSFTH*NLTAGD
Trigger: GTCCCCAGCGGTGAGGTTGCAGTGAGTGAAGGAGAG...CTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAGTTCATGTAGGAGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR GCA 90 bp TGCTGGTTGTCTGGGGCAAGGAGACTGGGGAAGCACAGATTCTGCTTCTCACCCGGGTGGTGGGAGACCTaGTCACTGATGAAGCGGAAG +
Preference number: 2 (lower is better)
Translates to: CWLSGARRLGKHRFCFSPGWWET*SLMKRK
Trigger: CTTCCGCTTCATCAGTGAGCAGGTCTCCCACCACCC...GGGTGAGAAGCAGAATCTGTGCTTCCCCAGTCTCCTTGCCCCAGACAACCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579728.5
3UTR-3UTR CCA 90 bp GCACAGAAAGCCTGGGGAGCGTCAAGGAGTCCCCTGTGTCCTAGGAAGGCACTGTACATGCTGGTTGTCTaGGGCAAGGAGACTGGGGAA +
Preference number: 2 (lower is better)
Translates to: AQKAWGASRSPLCPRKALYMLVV*GKETGE
Trigger: TTCCCCAGTCTCCTTGCCCCAGACAACCAGCATGTA...CAGTGCCTTCCTAGGACACAGGGGACTCCTTGACGCTCCCCAGGCTTTCTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR CCA 90 bp CTTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGACAGGTGCCTTGAAGGGTCTTACATGCTaGTTGTCTGGGGCAAGGAGA +
Preference number: 2 (lower is better)
Translates to: LTLTPAHSLPVGQRTGALKGLTC*LSGARR
Trigger: TCTCCTTGCCCCAGACAACCAGCATGTAAGACCCTT...CAAGGCACCTGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR CCA 90 bp CCCAAAGGGGACAGGAATCGGAATGGTGAAGCGGGAAGGGTCTTACATGCTGGTTGGGCACAGAAAGCCTaGGGAGCGTCAAGGAGTCCC +
Preference number: 2 (lower is better)
Translates to: PKGDRNRNGEAGRVLHAGWAQKA*GASRSP
Trigger: GGGACTCCTTGACGCTCCCCAGGCTTTCTGTGCCCA...ACCAGCATGTAAGACCCTTCCCGCTTCACCATTCCGATTCCTGTCCCCTTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR CCA 90 bp ACAGGCGCACACGCATACACTCTCCTACATGAACTTACACTCACACCTGCGCACAGAGCAGCGATGTGGTaGACCCCCAGCAGGGGGAAG +
Preference number: 2 (lower is better)
Translates to: TGAHAYTLLHELTLTPAHRAAMW*TPSRGK
Trigger: CTTCCCCCTGCTGGGGGTCCACCACATCGCTGCTCT...GTGCGCAGGTGTGAGTGTAAGTTCATGTAGGAGAGTGTATGCGTGTGCGCCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR CCA 90 bp GGCAGAAGGGGAGGGAGAACAGATCACCTCCTCTCCTTCACTCACTGCAACCTCGGAGTCTCGTGTCGGTaGAAGGCAGCGACCGTTTCA +
Preference number: 2 (lower is better)
Translates to: GRRGGRTDHLLSFTHCNLGVSCR*KAATVS
Trigger: TGAAACGGTCGCTGCCTTCCACCGACACGAGACTCC...GAGGTTGCAGTGAGTGAAGGAGAGGAGGTGATCTGTTCTCCCTCCCCTTCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR CCA 90 bp CCTCCAGTAGGTATTGTTGGTCACCCACCACTCTTTCCCGCTGCTATCCGTCTGTCCTCCAGGTACCTCTaGTCTGGCCGGAGTCTCGTG +
Preference number: 2 (lower is better)
Translates to: PPVGIVGHPPLFPAAIRLSSRYL*SGRSLV
Trigger: CACGAGACTCCGGCCAGACCAGAGGTACCTGGAGGA...CAGACGGATAGCAGCGGGAAAGAGTGGTGGGTGACCAACAATACCTACTGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578461.1
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR CCA 90 bp ACAGGCGCACACGCATACACTCTCCTACATGAACTTACACTCACACCTGCGCACCATGTTCCCATAGCCTaGCTCGGCCCGCAGCCTCCA +
Preference number: 2 (lower is better)
Translates to: TGAHAYTLLHELTLTPAHHVPIA*LGPQPP
Trigger: TGGAGGCTGCGGGCCGAGCCAGGCTATGGGAACATG...GTGCGCAGGTGTGAGTGTAAGTTCATGTAGGAGAGTGTATGCGTGTGCGCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR GCA 90 bp TGCTGGTTGTCTGGGGCAAGGAGACTGGGGAAGCACAGATTCTGCTTCTCACCCGGGAAGGGTCTTACATaGTGGTTGTCTGGGGCAAGG +
Preference number: 2 (lower is better)
Translates to: CWLSGARRLGKHRFCFSPGKGLT*WLSGAR
Trigger: CCTTGCCCCAGACAACCAGCATGTAAGACCCTTCCC...GGGTGAGAAGCAGAATCTGTGCTTCCCCAGTCTCCTTGCCCCAGACAACCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR GCA 90 bp AGTCTCGTGTCGGTGGAAGGCAGCGACCGTTTCAGCTCTGCTGTCAGCTCATTCGGGAAGGGTCTTACATaGTGGTTGTCTGGGGCAAGG +
Preference number: 2 (lower is better)
Translates to: SLVSVEGSDRFSSAVSSFGKGLT*WLSGAR
Trigger: CCTTGCCCCAGACAACCAGCATGTAAGACCCTTCCC...GAATGAGCTGACAGCAGAGCTGAAACGGTCGCTGCCTTCCACCGACACGAGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR GCA 90 bp TTTTCCTCCATGACTTTGCGCCTGTCTCGCTGCAGCTGCTCGATCCTTCTCTTCACCCTGACCCAGATCTaGTATCGGACCCCAGGCTGG +
Preference number: 2 (lower is better)
Translates to: FSSMTLRLSRCSCSILLFTLTQI*YRTPGW
Trigger: CCAGCCTGGGGTCCGATAGCAGATCTGGGTCAGGGT...GAAGAGAAGGATCGAGCAGCTGCAGCGAGACAGGCGCAAAGTCATGGAGGAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613735.4
3UTR-3UTR GCA 90 bp ATGGTGAAGCGGGAAGGGTCTTACATGCTGGTTGTCTGGGGCAAGGAGACTGGGCGGTACAGAGCTTCTTaGTCCTCAGGGTTGAGGGAG +
Preference number: 2 (lower is better)
Translates to: MVKREGSYMLVVWGKETGRYRAS*SSGLRE
Trigger: CTCCCTCAACCCTGAGGAGCAAGAAGCTCTGTACCG...CCCAGTCTCCTTGCCCCAGACAACCAGCATGTAAGACCCTTCCCGCTTCACCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613735.4
3UTR-3UTR CCA 90 bp TGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCTACATGAACTTACACTCTGGGCACAGAAAGCCTaGGGAGCGTCAAGGAGTCCC +
Preference number: 2 (lower is better)
Translates to: CKQGTGAHAYTLLHELTLWAQKA*GASRSP
Trigger: GGGACTCCTTGACGCTCCCCAGGCTTTCTGTGCCCA...GAGTGTAAGTTCATGTAGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR CCA 90 bp GCCAGGGCTACCAGAGCACGGCCCCATCCATGTTCCCATAGCCTGGCTCGGCCCGTCTTTATTGGAGCTTaGAATGTCATAGCAATTCGC +
Preference number: 2 (lower is better)
Translates to: ARATRARPHPCSHSLARPVFIGA*NVIAIR
Trigger: GCGAATTGCTATGACATTCCAAGCTCCAATAAAGAC...GGGCCGAGCCAGGCTATGGGAACATGGATGGGGCCGTGCTCTGGTAGCCCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
3UTR CAA 90 bp CTGAAGAAGCGAGCCTGGTGTACGATGTTGTTTTCCTCCATGACTTaGCGCCTGTCTCGCTGCAGCTGCTCGATCCTTCTCTTCTGGGCC +
Preference number: 2 (lower is better)
Translates to: LKKRAWCTMLFSSMT*RLSRCSCSILLFWA
Trigger: GGCCCAGAAGAGAAGGATCGAGCAGCTGCAGCGAGACAGGCGCAAAGTCATGGAGGAAAACAACATCGTACACCAGGCTCGCTTCTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578461.1
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR GCA 90 bp TACACTCTCCTACATGAACTTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCTGTCTCGCTGCAGCTaGTCGATCCTTCTCTTCTGG +
Preference number: 2 (lower is better)
Translates to: YTLLHELTLTPAHSLPVGLSRCS*SILLFW
Trigger: CCAGAAGAGAAGGATCGAGCAGCTGCAGCGAGACAG...ACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAGTTCATGTAGGAGAGTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR CCA 90 bp TGCTGGTTGTCTGGGGCAAGGAGACTGGGGAAGCACAGATTCTGCTTCTCACCCTACATGCTGGTTGTCTaGGGCAAGGAGACTGGGGAA +
Preference number: 2 (lower is better)
Translates to: CWLSGARRLGKHRFCFSPYMLVV*GKETGE
Trigger: TTCCCCAGTCTCCTTGCCCCAGACAACCAGCATGTA...GGGTGAGAAGCAGAATCTGTGCTTCCCCAGTCTCCTTGCCCCAGACAACCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR CCA 90 bp GGGACAGGAATCGGAATGGTGAAGCGGGAAGGGTCTTACATGCTGGTTGTCTGGATAGGGAACAGATCCTaGGAGCCAGAGTCTCCCCCA +
Preference number: 2 (lower is better)
Translates to: GTGIGMVKREGSYMLVVWIGNRS*EPESPP
Trigger: TGGGGGAGACTCTGGCTCCCAGGATCTGTTCCCTAT...CCAGACAACCAGCATGTAAGACCCTTCCCGCTTCACCATTCCGATTCCTGTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR CCA 90 bp AAGCAGGGCACAGGCGCACACGCATACACTCTCCTACATGAACTTACACTCACATCCTCCAGGTACCTCTaGTCTGGCCGGAGTCTCGTG +
Preference number: 2 (lower is better)
Translates to: KQGTGAHAYTLLHELTLTSSRYL*SGRSLV
Trigger: CACGAGACTCCGGCCAGACCAGAGGTACCTGGAGGA...TGTGAGTGTAAGTTCATGTAGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR CCA 90 bp CATGCTGGTTGTCTGGGGCAAGGAGACTGGGGAAGCACAGATTCTGCTTCTCACTCGATCCTTCTCTTCTaGGCCTCAGCGGCCTGTATG +
Preference number: 2 (lower is better)
Translates to: HAGCLGQGDWGSTDSASHSILLF*ASAACM
Trigger: CATACAGGCCGCTGAGGCCCAGAAGAGAAGGATCGA...GTGAGAAGCAGAATCTGTGCTTCCCCAGTCTCCTTGCCCCAGACAACCAGCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR CCA 90 bp AACTTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGACAGGTGCCTTCCAGTAGGTATTGTTaGTCACCCACCACTCTTTCC +
Preference number: 2 (lower is better)
Translates to: NLHSHLRTRCRWVRGQVPSSRYC*SPTTLS
Trigger: GGAAAGAGTGGTGGGTGACCAACAATACCTACTGGA...AGGCACCTGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR GCA 90 bp TGTGTTTCGGATGAGCACCTCCCCATAGTGCTCGATCCAGCGCTGACCACTCAGGAAGGAGCTGGAAGCTaGAGGCATTTTGCAGTTAGG +
Preference number: 2 (lower is better)
Translates to: CVSDEHLPIVLDPALTTQEGAGS*RHFAVR
Trigger: CCTAACTGCAAAATGCCTGCAGCTTCCAGCTCCTTC...CTGAGTGGTCAGCGCTGGATCGAGCACTATGGGGAGGTGCTCATCCGAAACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579728.5
3UTR-3UTR GCA 90 bp CGCCTGAAGAAGCGAGCCTGGTGTACGATGTTGTTTTCCTCCATGACTTTGCGCCGAGACAGCAAAGGCTaGGATGTACACCATGCGCTC +
Preference number: 2 (lower is better)
Translates to: RLKKRAWCTMLFSSMTLRRDSKG*DVHHAL
Trigger: GAGCGCATGGTGTACATCGCAGCCTTTGCTGTCTCG...GCGCAAAGTCATGGAGGAAAACAACATCGTACACCAGGCTCGCTTCTTCAGGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579728.5
3UTR-3UTR CCA 90 bp ACTCTCCTACATGAACTTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAAGGGTCTTACATGCTaGTTGTCTGGGGCAAGGAGA +
Preference number: 2 (lower is better)
Translates to: TLLHELTLTPAHSLPVGQKGLTC*LSGARR
Trigger: TCTCCTTGCCCCAGACAACCAGCATGTAAGACCCTT...CTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAGTTCATGTAGGAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR CCA 90 bp GGGACAGTCTTTATTGGAGCTTGGAATGTCATAGCAATTCGCCCTCATCAGAGGGAAAGAGCAGCGATGTaGTGGACCCCCAGCAGGGGG +
Preference number: 2 (lower is better)
Translates to: GTVFIGAWNVIAIRPHQRERAAM*WTPSRG
Trigger: CCCCCTGCTGGGGGTCCACCACATCGCTGCTCTTTC...CCTCTGATGAGGGCGAATTGCTATGACATTCCAAGCTCCAATAAAGACTGTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR CCA 90 bp TGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCTACATGAACTTACACTCTCGATCCTTCTCTTCTaGGCCTCAGCGGCCTGTATG +
Preference number: 2 (lower is better)
Translates to: CKQGTGAHAYTLLHELTLSILLF*ASAACM
Trigger: CATACAGGCCGCTGAGGCCCAGAAGAGAAGGATCGA...GAGTGTAAGTTCATGTAGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR CCA 90 bp GGGACAGGAATCGGAATGGTGAAGCGGGAAGGGTCTTACATGCTGGTTGTCTGGAAGGGTCTTACATGCTaGTTGTCTGGGGCAAGGAGA +
Preference number: 2 (lower is better)
Translates to: GTGIGMVKREGSYMLVVWKGLTC*LSGARR
Trigger: TCTCCTTGCCCCAGACAACCAGCATGTAAGACCCTT...CCAGACAACCAGCATGTAAGACCCTTCCCGCTTCACCATTCCGATTCCTGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR CCA 90 bp GACAGTCTTTATTGGAGCTTGGAATGTCATAGCAATTCGCCCTCATCAGAGGCAAGAGCAGCGATGTGGTaGACCCCCAGCAGGGGGAAG +
Preference number: 2 (lower is better)
Translates to: DSLYWSLECHSNSPSSEARAAMW*TPSRGK
Trigger: CTTCCCCCTGCTGGGGGTCCACCACATCGCTGCTCT...TGCCTCTGATGAGGGCGAATTGCTATGACATTCCAAGCTCCAATAAAGACTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR CCA 90 bp GGGACAGTCTTTATTGGAGCTTGGAATGTCATAGCAATTCGCCCTCATCAGAGGTCCTCCAGGTACCTCTaGTCTGGCCGGAGTCTCGTG +
Preference number: 2 (lower is better)
Translates to: GTVFIGAWNVIAIRPHQRSSRYL*SGRSLV
Trigger: CACGAGACTCCGGCCAGACCAGAGGTACCTGGAGGA...CCTCTGATGAGGGCGAATTGCTATGACATTCCAAGCTCCAATAAAGACTGTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR CCA 90 bp TGGAATGTCATAGCAATTCGCCCTCATCAGAGGCAGACTGTGAGAAAGAGCAGCTTCCCAAAGAGTCGGTaGAGGACACGGCCACTCCGA +
Preference number: 2 (lower is better)
Translates to: WNVIAIRPHQRQTVRKSSFPKSR*RTRPLR
Trigger: TCGGAGTGGCCGTGTCCTCCACCGACTCTTTGGGAA...GCTGCTCTTTCTCACAGTCTGCCTCTGATGAGGGCGAATTGCTATGACATTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579728.5
3UTR-3UTR GCA 90 bp GGGACAGTCTTTATTGGAGCTTGGAATGTCATAGCAATTCGCCCTCATCAGAGGTTGCGCCTGTCTCGCTaGAGCTGCTCGATCCTTCTC +
Preference number: 2 (lower is better)
Translates to: GTVFIGAWNVIAIRPHQRLRLSR*SCSILL
Trigger: GAGAAGGATCGAGCAGCTGCAGCGAGACAGGCGCAA...CCTCTGATGAGGGCGAATTGCTATGACATTCCAAGCTCCAATAAAGACTGTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR CCA 90 bp GGGGAGGGAGAACAGATCACCTCCTCTCCTTCACTCACTGCAACCTCACCGCTGTGGGACAGTCTTTATTaGAGCTTGGAATGTCATAGC +
Preference number: 2 (lower is better)
Translates to: GEGEQITSSPSLTATSPLWDSLY*SLECHS
Trigger: GCTATGACATTCCAAGCTCCAATAAAGACTGTCCCA...CAGCGGTGAGGTTGCAGTGAGTGAAGGAGAGGAGGTGATCTGTTCTCCCTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007414.8
ENST00000579728.5
3UTR-3UTR CCA 90 bp TTGGCCTTGCAGAAGGTGATCTTGCAGTGGCAGGAGCTGTCCTGTGTGTTTCGGCTGAAGAAGCGAGCCTaGTGTACGATGTTGTTTTCC +
Preference number: 2 (lower is better)
Translates to: LALQKVILQWQELSCVFRLKKRA*CTMLFS
Trigger: GGAAAACAACATCGTACACCAGGCTCGCTTCTTCAG...CCGAAACACACAGGACAGCTCCTGCCACTGCAAGATCACCTTCTGCAAGGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579728.5
3UTR-3UTR GCA 90 bp TGGAATGTCATAGCAATTCGCCCTCATCAGAGGCAGACTGTGAGAAAGAGCAGCGAAGTTCTCAGACTCTaGATGGCAGGCCGAGATAGG +
Preference number: 2 (lower is better)
Translates to: WNVIAIRPHQRQTVRKSSEVLRL*MAGRDR
Trigger: CCTATCTCGGCCTGCCATGCAGAGTCTGAGAACTTC...GCTGCTCTTTCTCACAGTCTGCCTCTGATGAGGGCGAATTGCTATGACATTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579728.5
3UTR-3UTR GCA 90 bp TTGGCCTTGCAGAAGGTGATCTTGCAGTGGCAGGAGCTGTCCTGTGTGTTTCGGTCAGGACATTGTGAATaGAGGATGTCACCTTGTTCC +
Preference number: 2 (lower is better)
Translates to: LALQKVILQWQELSCVFRSGHCE*RMSPCS
Trigger: GGAACAAGGTGACATCCTGCATTCACAATGTCCTGA...CCGAAACACACAGGACAGCTCCTGCCACTGCAAGATCACCTTCTGCAAGGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579728.5
3UTR CCA 72 bp AGGCCCGCTGGCCGCCGGCAGGCAGCGACGGCGGGGTaGCCCCATGGGTCTCCCTTTCTGACAGCGCTCAGC +
Preference number: 3 (lower is better)
Translates to: RPAGRRQAATAG*PHGSPFLTALS
Trigger: GCTGAGCGCTGTCAGAAAGGGAGACCCATGGGGCCACCCCGCCGTCGCTGCCTGCCGGCGGCCAGCGGGCCT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579728.5
3UTR GCA 72 bp TGGCCACCTGGCGTGGGTCCCCGGTACAGCCCCTCGTaGCACTTCCCAAAGAGTCGGTGGAGGACACGGCCA +
Preference number: 3 (lower is better)
Translates to: WPPGVGPRYSPS*HFPKSRWRTRP
Trigger: TGGCCGTGTCCTCCACCGACTCTTTGGGAAGTGGCACGAGGGGCTGTACCGGGGACCCACGCCAGGTGGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579728.5
3UTR CCA 72 bp CGGTACAGCCCCTCGTGCCACTTCCCAAAGAGTCGGTaGAGGACACGGCCACTCCGACTGAGCACAGCGCCC +
Preference number: 3 (lower is better)
Translates to: RYSPSCHFPKSR*RTRPLRLSTAP
Trigger: GGGCGCTGTGCTCAGTCGGAGTGGCCGTGTCCTCCACCGACTCTTTGGGAAGTGGCACGAGGGGCTGTACCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579728.5
3UTR TCA 72 bp GGAGAGGCCTCCTCCACTCTGGGGGATCCGCTGAGCTaGGACGGGAGGGAACCGCTTGAGGATCAGGGACGA +
Preference number: 3 (lower is better)
Translates to: GEASSTLGDPLS*DGREPLEDQGR
Trigger: TCGTCCCTGATCCTCAAGCGGTTCCCTCCCGTCTCAGCTCAGCGGATCCCCCAGAGTGGAGGAGGCCTCTCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
3UTR GCA 72 bp GGGAAGGCGGGGCTACATGAGGGAGCCCTGCTTGCCTaGAAGCAGGGCACAGGCGCACACGCATACACTCTC +
Preference number: 3 (lower is better)
Translates to: GKAGLHEGALLA*KQGTGAHAYTL
Trigger: GAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGCAAGCAGGGCTCCCTCATGTAGCCCCGCCTTCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR CAA 90 bp GGCCTCAGCGGCCTGTATGTTCCCCTCCTCCAGGTACCTCTGGTCTGGCCGGAGACAGGGTTGAAGGGCTaGCAGCCGGCTCGGTGGTAT +
Preference number: 3 (lower is better)
Translates to: GLSGLYVPLLQVPLVWPETGLKG*QPARWY
Trigger: ATACCACCGAGCCGGCTGCAAGCCCTTCAACCCTGT...CTCCGGCCAGACCAGAGGTACCTGGAGGAGGGGAACATACAGGCCGCTGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579728.5
3UTR CCA 72 bp CGCCTGTCTCGCTGCAGCTGCTCGATCCTTCTCTTCTaGGCCTCAGCGGCCTGTATGTTCCCCTCCTCCAGG +
Preference number: 3 (lower is better)
Translates to: RLSRCSCSILLF*ASAACMFPSSR
Trigger: CCTGGAGGAGGGGAACATACAGGCCGCTGAGGCCCAGAAGAGAAGGATCGAGCAGCTGCAGCGAGACAGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578461.1
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR CAA 90 bp GGAGCCCTGCTTGCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCTACAGAGGACAGGTGCCTaGGGCTGCTCCCCTCCTCAT +
Preference number: 3 (lower is better)
Translates to: GALLACKQGTGAHAYTLLQRTGA*GCSPPH
Trigger: ATGAGGAGGGGAGCAGCCCAAGGCACCTGTCCTCTG...TAGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGCAAGCAGGGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR CAA 90 bp GCACAGAAAGCCTGGGGAGCGTCAAGGAGTCCCCTGTGTCCTAGGAAGGCACTGCAGAGGACAGGTGCCTaGGGCTGCTCCCCTCCTCAT +
Preference number: 3 (lower is better)
Translates to: AQKAWGASRSPLCPRKALQRTGA*GCSPPH
Trigger: ATGAGGAGGGGAGCAGCCCAAGGCACCTGTCCTCTG...CAGTGCCTTCCTAGGACACAGGGGACTCCTTGACGCTCCCCAGGCTTTCTGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR CAA 90 bp GCAGACTGTGAGAAAGAGCAGCGATGTGGTGGACCCCCAGCAGGGGGAAGGCGGCCGGTACAGAGCTTCTaGCTCCTCAGGGTTGAGGGA +
Preference number: 3 (lower is better)
Translates to: ADCEKEQRCGGPPAGGRRPVQSF*LLRVEG
Trigger: TCCCTCAACCCTGAGGAGCAAGAAGCTCTGTACCGG...CCGCCTTCCCCCTGCTGGGGGTCCACCACATCGCTGCTCTTTCTCACAGTCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000613735.4
3UTR TCA 72 bp TCCCAAAGAGTCGGTGGAGGACACGGCCACTCCGACTaGGCACAGCGCCCTGCACCTCGTGGACATTGGAAC +
Preference number: 3 (lower is better)
Translates to: SQRVGGGHGHSD*AQRPAPRGHWN
Trigger: GTTCCAATGTCCACGAGGTGCAGGGCGCTGTGCTCAGTCGGAGTGGCCGTGTCCTCCACCGACTCTTTGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579728.5
3UTR GCA 72 bp TGGAGGACACGGCCACTCCGACTGAGCACAGCGCCCTaGACCTCGTGGACATTGGAACTCCAGTACTTGGCC +
Preference number: 3 (lower is better)
Translates to: WRTRPLRLSTAP*TSWTLELQYLA
Trigger: GGCCAAGTACTGGAGTTCCAATGTCCACGAGGTGCAGGGCGCTGTGCTCAGTCGGAGTGGCCGTGTCCTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579728.5
3UTR GCA 72 bp GGAGGGAGAACAGATCACCTCCTCTCCTTCACTCACTaGAACCTCACCGCTGGGGACAGAGGCCTGGGCACA +
Preference number: 3 (lower is better)
Translates to: GGRTDHLLSFTH*NLTAGDRGLGT
Trigger: TGTGCCCAGGCCTCTGTCCCCAGCGGTGAGGTTGCAGTGAGTGAAGGAGAGGAGGTGATCTGTTCTCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
3UTR CCA 72 bp AGCCTGGCTCGGCCCGCAGCCTCCAGTAGGTATTGTTaGTCACCCACCACTCTTTCCCGCTGCTATCCGTCT +
Preference number: 3 (lower is better)
Translates to: SLARPAASSRYC*SPTTLSRCYPS
Trigger: AGACGGATAGCAGCGGGAAAGAGTGGTGGGTGACCAACAATACCTACTGGAGGCTGCGGGCCGAGCCAGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578461.1
ENST00000579728.5
ENST00000613735.4
3UTR CCA 72 bp CTACCAGAGCACGGCCCCATCCATGTTCCCATAGCCTaGCTCGGCCCGCAGCCTCCAGTAGGTATTGTTGGT +
Preference number: 3 (lower is better)
Translates to: LPEHGPIHVPIA*LGPQPPVGIVG
Trigger: ACCAACAATACCTACTGGAGGCTGCGGGCCGAGCCAGGCTATGGGAACATGGATGGGGCCGTGCTCTGGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578461.1
ENST00000579728.5
ENST00000613735.4
3UTR CCA 72 bp CGGCCACTCCGACTGAGCACAGCGCCCTGCACCTCGTaGACATTGGAACTCCAGTACTTGGCCTTGCAGAAG +
Preference number: 3 (lower is better)
Translates to: RPLRLSTAPCTS*TLELQYLALQK
Trigger: CTTCTGCAAGGCCAAGTACTGGAGTTCCAATGTCCACGAGGTGCAGGGCGCTGTGCTCAGTCGGAGTGGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579728.5
3UTR-3UTR CAA 90 bp CTTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGACAGGTGCCTTGGGTCTTACATGCTGGTaGTCTGGGGCAAGGAGACTG +
Preference number: 3 (lower is better)
Translates to: LTLTPAHSLPVGQRTGALGLTCW*SGARRL
Trigger: CAGTCTCCTTGCCCCAGACAACCAGCATGTAAGACC...CAAGGCACCTGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR CAA 90 bp CCCATAGCCTGGCTCGGCCCGCAGCCTCCAGTAGGTATTGTTGGTCACCCACCATTTTCCTCCATGACTTaGCGCCTGTCTCGCTGCAGC +
Preference number: 3 (lower is better)
Translates to: PIAWLGPQPPVGIVGHPPFSSMT*RLSRCS
Trigger: GCTGCAGCGAGACAGGCGCAAAGTCATGGAGGAAAA...TGGTGGGTGACCAACAATACCTACTGGAGGCTGCGGGCCGAGCCAGGCTATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578461.1
ENST00000579728.5
ENST00000613735.4
3UTR GCA 72 bp TCCTACATGAACTTACACTCACACCTGCGCACTCGCTaGCGGTGGGTCAGAGGACAGGTGCCTTGGGCTGCT +
Preference number: 3 (lower is better)
Translates to: SYMNLHSHLRTR*RWVRGQVPWAA
Trigger: AGCAGCCCAAGGCACCTGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAGTTCATGTAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR CAA 90 bp GGGGAGGGAGAACAGATCACCTCCTCTCCTTCACTCACTGCAACCTCACCGCTGGGTCTTACATGCTGGTaGTCTGGGGCAAGGAGACTG +
Preference number: 3 (lower is better)
Translates to: GEGEQITSSPSLTATSPLGLTCW*SGARRL
Trigger: CAGTCTCCTTGCCCCAGACAACCAGCATGTAAGACC...CAGCGGTGAGGTTGCAGTGAGTGAAGGAGAGGAGGTGATCTGTTCTCCCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
3UTR TCA 72 bp TCTTGCAGTGGCAGGAGCTGTCCTGTGTGTTTCGGATaGGCACCTCCCCATAGTGCTCGATCCAGCGCTGAC +
Preference number: 3 (lower is better)
Translates to: SCSGRSCPVCFG*APPHSARSSAD
Trigger: GTCAGCGCTGGATCGAGCACTATGGGGAGGTGCTCATCCGAAACACACAGGACAGCTCCTGCCACTGCAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579728.5
3UTR GCA 72 bp TTTTCCTCCATGACTTTGCGCCTGTCTCGCTGCAGCTaGTCGATCCTTCTCTTCTGGGCCTCAGCGGCCTGT +
Preference number: 3 (lower is better)
Translates to: FSSMTLRLSRCS*SILLFWASAAC
Trigger: ACAGGCCGCTGAGGCCCAGAAGAGAAGGATCGAGCAGCTGCAGCGAGACAGGCGCAAAGTCATGGAGGAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578461.1
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR CAA 90 bp AACTTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGACAGGTGCCTGAAGCTGCAGGCATTTaGCAGTTAGGGAGAAGGGAT +
Preference number: 3 (lower is better)
Translates to: NLHSHLRTRCRWVRGQVPEAAGI*QLGRRD
Trigger: ATCCCTTCTCCCTAACTGCAAAATGCCTGCAGCTTC...AGGCACCTGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR CAA 90 bp AGTCTCGTGTCGGTGGAAGGCAGCGACCGTTTCAGCTCTGCTGTCAGCTCATTCTTTTCCTCCATGACTTaGCGCCTGTCTCGCTGCAGC +
Preference number: 3 (lower is better)
Translates to: SLVSVEGSDRFSSAVSSFFSSMT*RLSRCS
Trigger: GCTGCAGCGAGACAGGCGCAAAGTCATGGAGGAAAA...GAATGAGCTGACAGCAGAGCTGAAACGGTCGCTGCCTTCCACCGACACGAGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR CAA 90 bp GGGGAGGGAGAACAGATCACCTCCTCTCCTTCACTCACTGCAACCTCACCGCTGACAGGCATTGACACCTaGGACAGGTCTTTGCCGATG +
Preference number: 3 (lower is better)
Translates to: GEGEQITSSPSLTATSPLTGIDT*DRSLPM
Trigger: CATCGGCAAAGACCTGTCCAAGGTGTCAATGCCTGT...CAGCGGTGAGGTTGCAGTGAGTGAAGGAGAGGAGGTGATCTGTTCTCCCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579728.5
3UTR TCA 72 bp GAGCGTCAAGGAGTCCCCTGTGTCCTAGGAAGGCACTaGAATAGGGAACAGATCCTGGGAGCCAGAGTCTCC +
Preference number: 3 (lower is better)
Translates to: ERQGVPCVLGRH*NREQILGARVS
Trigger: GGAGACTCTGGCTCCCAGGATCTGTTCCCTATTTCAGTGCCTTCCTAGGACACAGGGGACTCCTTGACGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
3UTR GCA 72 bp TCTCGTGTCGGTGGAAGGCAGCGACCGTTTCAGCTCTaGTGTCAGCTCATTCAGCTCCAAGGCAAACTGGGT +
Preference number: 3 (lower is better)
Translates to: SRVGGRQRPFQL*CQLIQLQGKLG
Trigger: ACCCAGTTTGCCTTGGAGCTGAATGAGCTGACAGCAGAGCTGAAACGGTCGCTGCCTTCCACCGACACGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
3UTR CCA 72 bp CCGCTGCTATCCGTCTGCCGCCTGAAGAAGCGAGCCTaGTGTACGATGTTGTTTTCCTCCATGACTTTGCGC +
Preference number: 3 (lower is better)
Translates to: PLLSVCRLKKRA*CTMLFSSMTLR
Trigger: GCGCAAAGTCATGGAGGAAAACAACATCGTACACCAGGCTCGCTTCTTCAGGCGGCAGACGGATAGCAGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578461.1
ENST00000579728.5
ENST00000613735.4
3UTR TCA 72 bp AGAAGCGAGCCTGGTGTACGATGTTGTTTTCCTCCATaGCTTTGCGCCTGTCTCGCTGCAGCTGCTCGATCC +
Preference number: 3 (lower is better)
Translates to: RSEPGVRCCFPP*LCACLAAAARS
Trigger: GGATCGAGCAGCTGCAGCGAGACAGGCGCAAAGTCATGGAGGAAAACAACATCGTACACCAGGCTCGCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578461.1
ENST00000579728.5
ENST00000613735.4
3UTR CCA 72 bp AGGGTCTTACATGCTGGTTGTCTGGGGCAAGGAGACTaGGGAAGCACAGATTCTGCTTCTCACCCCAAACGG +
Preference number: 3 (lower is better)
Translates to: RVLHAGCLGQGD*GSTDSASHPKR
Trigger: CCGTTTGGGGTGAGAAGCAGAATCTGTGCTTCCCCAGTCTCCTTGCCCCAGACAACCAGCATGTAAGACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
3UTR CCA 72 bp CTCCAGTACTTGGCCTTGCAGAAGGTGATCTTGCAGTaGCAGGAGCTGTCCTGTGTGTTTCGGATGAGCACC +
Preference number: 3 (lower is better)
Translates to: LQYLALQKVILQ*QELSCVFRMST
Trigger: GGTGCTCATCCGAAACACACAGGACAGCTCCTGCCACTGCAAGATCACCTTCTGCAAGGCCAAGTACTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579728.5
3UTR-3UTR CAA 90 bp TGGAATGTCATAGCAATTCGCCCTCATCAGAGGCAGACTGTGAGAAAGAGCAGCACGGGAGGGAACCGCTaGAGGATCAGGGACGAAGGA +
Preference number: 3 (lower is better)
Translates to: WNVIAIRPHQRQTVRKSSTGGNR*RIRDEG
Trigger: TCCTTCGTCCCTGATCCTCAAGCGGTTCCCTCCCGT...GCTGCTCTTTCTCACAGTCTGCCTCTGATGAGGGCGAATTGCTATGACATTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR CAA 90 bp ACTCTCCTACATGAACTTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGTCTTTGCCGATGTaGTTGCGCAGAATGTTCCAC +
Preference number: 3 (lower is better)
Translates to: TLLHELTLTPAHSLPVGQRSLPM*LRRMFH
Trigger: GTGGAACATTCTGCGCAACAACATCGGCAAAGACCT...CTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAGTTCATGTAGGAGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579728.5
3UTR-3UTR CAA 90 bp GGAGCCCTGCTTGCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCTAAGTCTTTATTGGAGCTaGGAATGTCATAGCAATTCG +
Preference number: 3 (lower is better)
Translates to: GALLACKQGTGAHAYTLLSLYWS*ECHSNS
Trigger: CGAATTGCTATGACATTCCAAGCTCCAATAAAGACT...TAGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGCAAGCAGGGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR CAA 90 bp CCAGTAGGTATTGTTGGTCACCCACCACTCTTTCCCGCTGCTATCCGTCTGCCGGCCTGGTGTACGATGTaGTTTTCCTCCATGACTTTG +
Preference number: 3 (lower is better)
Translates to: PVGIVGHPPLFPAAIRLPAWCTM*FSSMTL
Trigger: CAAAGTCATGGAGGAAAACAACATCGTACACCAGGC...CGGCAGACGGATAGCAGCGGGAAAGAGTGGTGGGTGACCAACAATACCTACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578461.1
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR CAA 90 bp GGGACAGTCTTTATTGGAGCTTGGAATGTCATAGCAATTCGCCCTCATCAGAGGTTTTCCTCCATGACTTaGCGCCTGTCTCGCTGCAGC +
Preference number: 3 (lower is better)
Translates to: GTVFIGAWNVIAIRPHQRFSSMT*RLSRCS
Trigger: GCTGCAGCGAGACAGGCGCAAAGTCATGGAGGAAAA...CCTCTGATGAGGGCGAATTGCTATGACATTCCAAGCTCCAATAAAGACTGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
3UTR-3UTR CAA 90 bp GTCTTTATTGGAGCTTGGAATGTCATAGCAATTCGCCCTCATCAGAGGCAGACTGAAGCTGCAGGCATTTaGCAGTTAGGGAGAAGGGAT +
Preference number: 3 (lower is better)
Translates to: VFIGAWNVIAIRPHQRQTEAAGI*QLGRRD
Trigger: ATCCCTTCTCCCTAACTGCAAAATGCCTGCAGCTTC...AGTCTGCCTCTGATGAGGGCGAATTGCTATGACATTCCAAGCTCCAATAAAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp GGGGCCAGGGCTACCAGAGCACGGCCCCATCCATGTTCCCATAGCCTGGCTCGGCGGTGGGCTAGGCGGTaGGCACGCAGCTGCGCCACC +
Preference number: 4 (lower is better)
Translates to: GARATRARPHPCSHSLARRWARR*ARSCAT
Trigger: GGTGGCGCAGCTGCGTGCCCACCGCCTAGCCCACCG...CCGAGCCAGGCTATGGGAACATGGATGGGGCCGTGCTCTGGTAGCCCTGGCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp CCTGGGCCAGGACAGATGACAGGCCGGGCAGACTGGGCCTCCCCCGGGCAGCTGAGCTGGAGAAGGCCCTaGAGGGCCAGGGAAGGGGAA +
Preference number: 4 (lower is better)
Translates to: PGPGQMTGRADWASPGQLSWRRP*RAREGE
Trigger: TTCCCCTTCCCTGGCCCTGCAGGGCCTTCTCCAGCT...CAGCTGCCCGGGGGAGGCCCAGTCTGCCCGGCCTGTCATCTGTCCTGGCCCAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579728.5
CDS-3UTR CCA 90 bp GGGGCCAGGGCTACCAGAGCACGGCCCCATCCATGTTCCCATAGCCTGGCTCGGGGCATGTCCAGGCGGTaGGCTAGGCGGTGGGCACGC +
Preference number: 4 (lower is better)
Translates to: GARATRARPHPCSHSLARGMSRR*ARRWAR
Trigger: GCGTGCCCACCGCCTAGCCCACCGCCTGGACATGCC...CCGAGCCAGGCTATGGGAACATGGATGGGGCCGTGCTCTGGTAGCCCTGGCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
CDS-3UTR TCA 90 bp GGGAGCCCTGCTTGCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCTTGGGCAGAAGGGCAGTaGGGCGGGGAGCCCGGCCTC +
Preference number: 4 (lower is better)
Translates to: GSPACLQAGHRRTRIHSPWAEGQ*GGEPGL
Trigger: GAGGCCGGGCTCCCCGCCTCACTGCCCTTCTGCCCA...AGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGCAAGCAGGGCTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392507.7
CDS-3UTR CCA 90 bp CAGACTGTGAGAAAGAGCAGCGATGTGGTGGACCCCCAGCAGGGGGAAGGCGGGCGGTGGGCTAGGCGGTaGGCACGCAGCTGCGCCACC +
Preference number: 4 (lower is better)
Translates to: QTVRKSSDVVDPQQGEGGRWARR*ARSCAT
Trigger: GGTGGCGCAGCTGCGTGCCCACCGCCTAGCCCACCG...CCCGCCTTCCCCCTGCTGGGGGTCCACCACATCGCTGCTCTTTCTCACAGTCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR TCA 90 bp CAGACTGTGAGAAAGAGCAGCGATGTGGTGGACCCCCAGCAGGGGGAAGGCGGGTGGTCTCAAGGGCAGTaGGGCGGGGAGCCCGGCCTC +
Preference number: 4 (lower is better)
Translates to: QTVRKSSDVVDPQQGEGGWSQGQ*GGEPGL
Trigger: GAGGCCGGGCTCCCCGCCTCACTGCCCTTGAGACCA...CCCGCCTTCCCCCTGCTGGGGGTCCACCACATCGCTGCTCTTTCTCACAGTCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR TCA 90 bp GGCCTCAGCGGCCTGTATGTTCCCCTCCTCCAGGTACCTCTGGTCTGGCCGGAGCTGGGCCAGGACAGATaGCAGGCCGGGCAGACTGGG +
Preference number: 4 (lower is better)
Translates to: GLSGLYVPLLQVPLVWPELGQDR*QAGQTG
Trigger: CCCAGTCTGCCCGGCCTGTCATCTGTCCTGGCCCAG...CTCCGGCCAGACCAGAGGTACCTGGAGGAGGGGAACATACAGGCCGCTGAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579728.5
CDS-3UTR GCA 90 bp GGGAGCCCTGCTTGCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCTGGAACCAGAGCCTCCTaGCCCCGGGGCCAGGGCTAC +
Preference number: 4 (lower is better)
Translates to: GSPACLQAGHRRTRIHSPGTRAS*PRGQGY
Trigger: GTAGCCCTGGCCCCGGGGGCAGGAGGCTCTGGTTCC...AGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGCAAGCAGGGCTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp GACAGGAGGGATGGCCAGGGACTAACCAAAGGGAGCTGGAGAAGGCCCTGCAGGCGGTGGGCTAGGCGGTaGGCACGCAGCTGCGCCACC +
Preference number: 4 (lower is better)
Translates to: DRRDGQGLTKGSWRRPCRRWARR*ARSCAT
Trigger: GGTGGCGCAGCTGCGTGCCCACCGCCTAGCCCACCG...CCTGCAGGGCCTTCTCCAGCTCCCTTTGGTTAGTCCCTGGCCATCCCTCCTGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp GGAGCCCTGCTTGCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCTAGCAGCGACGGCGGGGTaGCCCCATGGGTCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: GALLACKQGTGAHAYTLLAATAG*PHGSPW
Trigger: CCAGGGAGACCCATGGGGCCACCCCGCCGTCGCTGC...TAGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGCAAGCAGGGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000007414.8
ENST00000392507.7
CDS-3UTR CCA 90 bp AGGGCAGTGAGGCGGGGAGCCCGGCCTCACCCATGTGTCCATGGTAGGGGGTGGGAAAGAGCAGCGATGTaGTGGACCCCCAGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: RAVRRGARPHPCVHGRGWERAAM*WTPSRG
Trigger: CCCCCTGCTGGGGGTCCACCACATCGCTGCTCTTTC...CCACCCCCTACCATGGACACATGGGTGAGGCCGGGCTCCCCGCCTCACTGCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp ACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGACAGGTGCCTTGGGCCGGTGGGCACGCAGCTaGGCCACCCAGCTCTGGAAT +
Preference number: 4 (lower is better)
Translates to: TLTPAHSLPVGQRTGALGRWARS*ATQLWN
Trigger: ATTCCAGAGCTGGGTGGCGCAGCTGCGTGCCCACCG...GCCCAAGGCACCTGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp GCAGACTGTGAGAAAGAGCAGCGATGTGGTGGACCCCCAGCAGGGGGAAGGCGGGTGGCAGCCCACGGGTaGCCGAGGAGTCCCGAGACT +
Preference number: 4 (lower is better)
Translates to: ADCEKEQRCGGPPAGGRRVAAHG*PRSPET
Trigger: AGTCTCGGGACTCCTCGGGCACCCGTGGGCTGCCAC...CCGCCTTCCCCCTGCTGGGGGTCCACCACATCGCTGCTCTTTCTCACAGTCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp CTTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGACAGGTGCCTTGGGAACCAGAGCCTCCTaGCCCCGGGGCCAGGGCTAC +
Preference number: 4 (lower is better)
Translates to: LTLTPAHSLPVGQRTGALGTRAS*PRGQGY
Trigger: GTAGCCCTGGCCCCGGGGGCAGGAGGCTCTGGTTCC...CAAGGCACCTGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp ACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGACAGGTGCCTTGGGCGGTGGGCATAGTCTGTaGGTGGCAGCCCACGGGTGC +
Preference number: 4 (lower is better)
Translates to: TLTPAHSLPVGQRTGALGGGHSL*VAAHGC
Trigger: GCACCCGTGGGCTGCCACCCACAGACTATGCCCACC...GCCCAAGGCACCTGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp CTTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGACAGGTGCCTTGGGTCGGCGATGCGGCTaGCCTGGTCCAGGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: LTLTPAHSLPVGQRTGALGRRCG*PGPGGC
Trigger: GCAGCCTCCTGGACCAGGCCAGCCGCATCGCCGACC...CAAGGCACCTGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS-3UTR CCA 90 bp CAGACTGTGAGAAAGAGCAGCGATGTGGTGGACCCCCAGCAGGGGGAAGGCGGGACTGGCCACCTGGCGTaGGTCCCCGGTACAGCCCCT +
Preference number: 4 (lower is better)
Translates to: QTVRKSSDVVDPQQGEGGTGHLA*VPGTAP
Trigger: AGGGGCTGTACCGGGGACCCACGCCAGGTGGCCAGT...CCCGCCTTCCCCCTGCTGGGGGTCCACCACATCGCTGCTCTTTCTCACAGTCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS-3UTR CCA 90 bp GGCCTCAGCGGCCTGTATGTTCCCCTCCTCCAGGTACCTCTGGTCTGGCCGGAGGATGCACTGGCCACCTaGCGTGGGTCCCCGGTACAG +
Preference number: 4 (lower is better)
Translates to: GLSGLYVPLLQVPLVWPEDALAT*RGSPVQ
Trigger: CTGTACCGGGGACCCACGCCAGGTGGCCAGTGCATC...CTCCGGCCAGACCAGAGGTACCTGGAGGAGGGGAACATACAGGCCGCTGAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp GCCAGGGCTACCAGAGCACGGCCCCATCCATGTTCCCATAGCCTGGCTCGGCCCTCTCACCCCAAACGGTaGGGTTGGGGGTGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: ARATRARPHPCSHSLARPSHPKR*GWGWAE
Trigger: CTCAGCCCACCCCCAACCCCACCGTTTGGGGTGAGA...GGGCCGAGCCAGGCTATGGGAACATGGATGGGGCCGTGCTCTGGTAGCCCTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
CDS-3UTR TCA 90 bp GAGGCAGACTGTGAGAAAGAGCAGCGATGTGGTGGACCCCCAGCAGGGGGAAGGCCCTCCTCACCGCGCTaGGCAGTGGCAGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: EADCEKEQRCGGPPAGGRPSSPR*AVAAAA
Trigger: AGCAGCTGCTGCCACTGCTCAGCGCGGTGAGGAGGG...CCTTCCCCCTGCTGGGGGTCCACCACATCGCTGCTCTTTCTCACAGTCTGCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000613735.4
CDS-3UTR TCA 90 bp GCAGACTGTGAGAAAGAGCAGCGATGTGGTGGACCCCCAGCAGGGGGAAGGCGGGCGCCGCTCTGCCTCTaGGTCACCGTCTCCGAGTCA +
Preference number: 4 (lower is better)
Translates to: ADCEKEQRCGGPPAGGRRAPLCL*VTVSES
Trigger: TGACTCGGAGACGGTGACTCAGAGGCAGAGCGGCGC...CCGCCTTCCCCCTGCTGGGGGTCCACCACATCGCTGCTCTTTCTCACAGTCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000613735.4
CDS-3UTR TCA 90 bp GAGGGAGCCCTGCTTGCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCGCGCCGCTCTGCCTCTaGGTCACCGTCTCCGAGTCA +
Preference number: 4 (lower is better)
Translates to: EGALLACKQGTGAHAYTLAPLCL*VTVSES
Trigger: TGACTCGGAGACGGTGACTCAGAGGCAGAGCGGCGC...GAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGCAAGCAGGGCTCCCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000613735.4
CDS-3UTR TCA 90 bp GGGAGCCCTGCTTGCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCTCGGCCAGGACGCTGCTaGGGGAGCTGTGCACCTTCT +
Preference number: 4 (lower is better)
Translates to: GSPACLQAGHRRTRIHSPRPGRC*GSCAPS
Trigger: AGAAGGTGCACAGCTCCCTCAGCAGCGTCCTGGCCG...AGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGCAAGCAGGGCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR TCA 90 bp GAGCCCTGCTTGCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCTACCACGGCCACTCCGACTaGGCACAGCGCCCTGCACCT +
Preference number: 4 (lower is better)
Translates to: EPCLPASRAQAHTHTLSYHGHSD*AQRPAP
Trigger: AGGTGCAGGGCGCTGTGCTCAGTCGGAGTGGCCGTG...GTAGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGCAAGCAGGGCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS-3UTR GCA 90 bp CCTCCAGGTACCTCTGGTCTGGCCGGAGTCTCGTGTCGGTGGAAGGCAGCGACCGCTGAGGGGATTCGGTaGAGGGACTCCAGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: PPGTSGLAGVSCRWKAATAEGIR*RDSRLW
Trigger: CCAGAGCCTGGAGTCCCTGCACCGAATCCCCTCAGC...GGTCGCTGCCTTCCACCGACACGAGACTCCGGCCAGACCAGAGGTACCTGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp GGCATTGAGTTGGGTTTCCAGATGCACTGGCCACCTGGCGTGGGTCCCCGGTACGTGGCAGCCCACGGGTaGCCGAGGAGTCCCGAGACT +
Preference number: 4 (lower is better)
Translates to: GIELGFQMHWPPGVGPRYVAAHG*PRSPET
Trigger: AGTCTCGGGACTCCTCGGGCACCCGTGGGCTGCCAC...GTACCGGGGACCCACGCCAGGTGGCCAGTGCATCTGGAAACCCAACTCAATGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp ACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGACAGGTGCCTTGGGCCCGCTGCTATCCGTCTaGCGCCTGAAGAAGCGAGCC +
Preference number: 4 (lower is better)
Translates to: TLTPAHSLPVGQRTGALGPLLSV*RLKKRA
Trigger: GGCTCGCTTCTTCAGGCGGCAGACGGATAGCAGCGG...GCCCAAGGCACCTGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp TGGCTCGGCCCGCAGCCTCCAGTAGGTATTGTTGGTCACCCACCACTCTTTCCCGGAACCAGAGCCTCCTaGCCCCGGGGCCAGGGCTAC +
Preference number: 4 (lower is better)
Translates to: WLGPQPPVGIVGHPPLFPGTRAS*PRGQGY
Trigger: GTAGCCCTGGCCCCGGGGGCAGGAGGCTCTGGTTCC...GGGAAAGAGTGGTGGGTGACCAACAATACCTACTGGAGGCTGCGGGCCGAGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000578461.1
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp AACTTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGACAGGTGCCTGGAACCAGAGCCTCCTaGCCCCGGGGCCAGGGCTAC +
Preference number: 4 (lower is better)
Translates to: NLHSHLRTRCRWVRGQVPGTRAS*PRGQGY
Trigger: GTAGCCCTGGCCCCGGGGGCAGGAGGCTCTGGTTCC...AGGCACCTGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp CAGACTGTGAGAAAGAGCAGCGATGTGGTGGACCCCCAGCAGGGGGAAGGCGGGGGGGGTGGGCTGAGATaGAGACCCTCTGGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: QTVRKSSDVVDPQQGEGGGGGLR*RPSGQQ
Trigger: CTGCTGGCCAGAGGGTCTGCATCTCAGCCCACCCCC...CCCGCCTTCCCCCTGCTGGGGGTCCACCACATCGCTGCTCTTTCTCACAGTCTG
66% GC, longest homopolymer 8 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp TTCCCCTCCTCCAGGTACCTCTGGTCTGGCCGGAGTCTCGTGTCGGTGGAAGGCCACCTGCGCACTCGCTaGCGGTGGGTCAGAGGACAG +
Preference number: 4 (lower is better)
Translates to: FPSSRYLWSGRSLVSVEGHLRTR*RWVRGQ
Trigger: CTGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTG...GCCTTCCACCGACACGAGACTCCGGCCAGACCAGAGGTACCTGGAGGAGGGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp GAGGGAGCCCTGCTTGCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCACCTGCGCACTCGCTaGCGGTGGGTCAGAGGACAG +
Preference number: 4 (lower is better)
Translates to: EGALLACKQGTGAHAYTLHLRTR*RWVRGQ
Trigger: CTGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTG...GAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGCAAGCAGGGCTCCCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp AGGGCAGTGAGGCGGGGAGCCCGGCCTCACCCATGTGTCCATGGTAGGGGGTGGAGGGACTCCAGGCTCTaGAGGAGCCTGTGTAGTTCC +
Preference number: 4 (lower is better)
Translates to: RAVRRGARPHPCVHGRGWRDSRL*RSLCSS
Trigger: GGAACTACACAGGCTCCTCCAGAGCCTGGAGTCCCT...CCACCCCCTACCATGGACACATGGGTGAGGCCGGGCTCCCCGCCTCACTGCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp AGGGAGCCCTGCTTGCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCGAGTGGAGGCGCCTCTaGCCAGTGGAGGCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: REPCLPASRAQAHTHTLSEWRRL*PVEASE
Trigger: CTCTGAGGCCTCCACTGGCCAGAGGCGCCTCCACTC...GGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGCAAGCAGGGCTCCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp GGAGCCCTGCTTGCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCTACTGGTCTGCGATAGCTaGGGGGTGAGCTCGCGCCCC +
Preference number: 4 (lower is better)
Translates to: GALLACKQGTGAHAYTLLLVCDS*GVSSRP
Trigger: GGGGCGCGAGCTCACCCCCCAGCTATCGCAGACCAG...TAGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGCAAGCAGGGCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS-3UTR CCA 90 bp AGCGGGAAGGGTCTTACATGCTGGTTGTCTGGGGCAAGGAGACTGGGGAAGCACGCAGCGACGGCGGGGTaGCCCCATGGGTCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: SGKGLTCWLSGARRLGKHAATAG*PHGSPW
Trigger: CCAGGGAGACCCATGGGGCCACCCCGCCGTCGCTGC...GTGCTTCCCCAGTCTCCTTGCCCCAGACAACCAGCATGTAAGACCCTTCCCGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000007414.8
CDS-3UTR CCA 90 bp AACTTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGACAGGTGCCTGGTCGGCGATGCGGCTaGCCTGGTCCAGGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: NLHSHLRTRCRWVRGQVPGRRCG*PGPGGC
Trigger: GCAGCCTCCTGGACCAGGCCAGCCGCATCGCCGACC...AGGCACCTGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAGTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS-3UTR CCA 90 bp TTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGACAGGTGCCTTGGACTGGCCACCTGGCGTaGGTCCCCGGTACAGCCCCT +
Preference number: 4 (lower is better)
Translates to: LHSHLRTRCRWVRGQVPWTGHLA*VPGTAP
Trigger: AGGGGCTGTACCGGGGACCCACGCCAGGTGGCCAGT...CCAAGGCACCTGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS-3UTR TCA 90 bp TCAGAGGCAGACTGTGAGAAAGAGCAGCGATGTGGTGGACCCCCAGCAGGGGGACCCTCCTCACCGCGCTaGGCAGTGGCAGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: SEADCEKEQRCGGPPAGGPSSPR*AVAAAA
Trigger: AGCAGCTGCTGCCACTGCTCAGCGCGGTGAGGAGGG...TCCCCCTGCTGGGGGTCCACCACATCGCTGCTCTTTCTCACAGTCTGCCTCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000613735.4
CDS-3UTR TCA 90 bp GAGGCAGACTGTGAGAAAGAGCAGCGATGTGGTGGACCCCCAGCAGGGGGAAGGGATGTCACCTGCTCCTaGCGGGGTCCCCAGGGTCCA +
Preference number: 4 (lower is better)
Translates to: EADCEKEQRCGGPPAGGRDVTCS*RGPQGP
Trigger: TGGACCCTGGGGACCCCGTCAGGAGCAGGTGACATC...CCTTCCCCCTGCTGGGGGTCCACCACATCGCTGCTCTTTCTCACAGTCTGCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000613735.4
CDS-3UTR TCA 90 bp ACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGACAGGTGCCTTGGGCAGCACTGCTGGGCTTTaGGGACTGAGCGCTCTCAGG +
Preference number: 4 (lower is better)
Translates to: TLTPAHSLPVGQRTGALGSTAGL*GLSALR
Trigger: CCTGAGAGCGCTCAGTCCTCAAAGCCCAGCAGTGCT...GCCCAAGGCACCTGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR TCA 90 bp CTTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGACAGGTGCCTTGCGGCCAGGACGCTGCTaGGGGAGCTGTGCACCTTCT +
Preference number: 4 (lower is better)
Translates to: LTLTPAHSLPVGQRTGALRPGRC*GSCAPS
Trigger: AGAAGGTGCACAGCTCCCTCAGCAGCGTCCTGGCCG...CAAGGCACCTGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR TCA 90 bp TCTGGTCTGGCCGGAGTCTCGTGTCGGTGGAAGGCAGCGACCGTTTCAGCTCTGCGGCCAGGACGCTGCTaGGGGAGCTGTGCACCTTCT +
Preference number: 4 (lower is better)
Translates to: SGLAGVSCRWKAATVSALRPGRC*GSCAPS
Trigger: AGAAGGTGCACAGCTCCCTCAGCAGCGTCCTGGCCG...CAGAGCTGAAACGGTCGCTGCCTTCCACCGACACGAGACTCCGGCCAGACCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
CDS-3UTR TCA 90 bp GCCCTGCTTGCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCTACATCCCCCAGGACAGGGTTaGAGGGCTTGCAGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: ALLACKQGTGAHAYTLLHPPGQG*RACSRL
Trigger: GAGCCGGCTGCAAGCCCTTCAACCCTGTCCTGGGGG...ATGTAGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGCAAGCAGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS-3UTR TCA 90 bp GCACAGAAAGCCTGGGGAGCGTCAAGGAGTCCCCTGTGTCCTAGGAAGGCACTGCACGGCCACTCCGACTaGGCACAGCGCCCTGCACCT +
Preference number: 4 (lower is better)
Translates to: AQKAWGASRSPLCPRKALHGHSD*AQRPAP
Trigger: AGGTGCAGGGCGCTGTGCTCAGTCGGAGTGGCCGTG...CAGTGCCTTCCTAGGACACAGGGGACTCCTTGACGCTCCCCAGGCTTTCTGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000007414.8
ENST00000579728.5
CDS-3UTR TCA 90 bp GGGGAGGGAGAACAGATCACCTCCTCTCCTTCACTCACTGCAACCTCACCGCTGTGGTCTCAAGGGCAGTaGGGCGGGGAGCCCGGCCTC +
Preference number: 4 (lower is better)
Translates to: GEGEQITSSPSLTATSPLWSQGQ*GGEPGL
Trigger: GAGGCCGGGCTCCCCGCCTCACTGCCCTTGAGACCA...CAGCGGTGAGGTTGCAGTGAGTGAAGGAGAGGAGGTGATCTGTTCTCCCTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR TCA 90 bp TTGAGGGAGCTGAAAGAGTCCGCCGTGGTGTCGGAGGAGGTGGACAGTGAGTGGGGGTTGGGGGTGGGCTaGGATGCAGACCCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: LRELKESAVVSEEVDSEWGLGVG*DADPLA
Trigger: GGCCAGAGGGTCTGCATCTCAGCCCACCCCCAACCC...CCACTCACTGTCCACCTCCTCCGACACCACGGCGGACTCTTTCAGCTCCCTCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000613735.4
CDS-3UTR TCA 90 bp GACAGGAGGGATGGCCAGGGACTAACCAAAGGGAGCTGGAGAAGGCCCTGCAGGGGGGATCCGCTGAGCTaGGACGGGAGGGAACCGCTT +
Preference number: 4 (lower is better)
Translates to: DRRDGQGLTKGSWRRPCRGDPLS*DGREPL
Trigger: AAGCGGTTCCCTCCCGTCTCAGCTCAGCGGATCCCC...CCTGCAGGGCCTTCTCCAGCTCCCTTTGGTTAGTCCCTGGCCATCCCTCCTGTC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR TCA 90 bp CACCCACCACTCTTTCCCGCTGCTATCCGTCTGCCGCCTGAAGAAGCGAGCCTGCTCTGGGGGATCCGCTaGGCTGAGACGGGAGGGAAC +
Preference number: 4 (lower is better)
Translates to: HPPLFPAAIRLPPEEASLLWGIR*AETGGN
Trigger: GTTCCCTCCCGTCTCAGCTCAGCGGATCCCCCAGAG...CAGGCTCGCTTCTTCAGGCGGCAGACGGATAGCAGCGGGAAAGAGTGGTGGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
CDS-3UTR TCA 90 bp GAGGCAGACTGTGAGAAAGAGCAGCGATGTGGTGGACCCCCAGCAGGGGGAAGGGAAGGCGGGGCTACATaGGGGAGCCCTGCTTGCCTG +
Preference number: 4 (lower is better)
Translates to: EADCEKEQRCGGPPAGGREGGAT*GSPACL
Trigger: CAGGCAAGCAGGGCTCCCTCATGTAGCCCCGCCTTC...CCTTCCCCCTGCTGGGGGTCCACCACATCGCTGCTCTTTCTCACAGTCTGCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR TCA 90 bp GGCATTGAGTTGGGTTTCCAGATGCACTGGCCACCTGGCGTGGGTCCCCGGTACGAAGGCGGGGCTACATaGGGGAGCCCTGCTTGCCTG +
Preference number: 4 (lower is better)
Translates to: GIELGFQMHWPPGVGPRYEGGAT*GSPACL
Trigger: CAGGCAAGCAGGGCTCCCTCATGTAGCCCCGCCTTC...GTACCGGGGACCCACGCCAGGTGGCCAGTGCATCTGGAAACCCAACTCAATGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp TCCCATAGCCTGGCTCGGCCCGCAGCCTCCAGTAGGTATTGTTGGTCACCCACCCGGTGGGCACGCAGCTaGGCCACCCAGCTCTGGAAT +
Preference number: 4 (lower is better)
Translates to: SHSLARPAASSRYCWSPTRWARS*ATQLWN
Trigger: ATTCCAGAGCTGGGTGGCGCAGCTGCGTGCCCACCG...GGTGGGTGACCAACAATACCTACTGGAGGCTGCGGGCCGAGCCAGGCTATGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp GGGGCCAGGGCTACCAGAGCACGGCCCCATCCATGTTCCCATAGCCTGGCTCGGTGGCAAAGCTCTGGGTaGACCACATGCGGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: GARATRARPHPCSHSLARWQSSG*TTCGLS
Trigger: GGACAAGCCGCATGTGGTGCACCCAGAGCTTTGCCA...CCGAGCCAGGCTATGGGAACATGGATGGGGCCGTGCTCTGGTAGCCCTGGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp AACTTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGACAGGTGCCTGTGGCAGCCCACGGGTaGCCGAGGAGTCCCGAGACT +
Preference number: 4 (lower is better)
Translates to: NLHSHLRTRCRWVRGQVPVAAHG*PRSPET
Trigger: AGTCTCGGGACTCCTCGGGCACCCGTGGGCTGCCAC...AGGCACCTGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp TTGGTCACCCACCACTCTTTCCCGCTGCTATCCGTCTGCCGCCTGAAGAAGCGACGCAGGGGTCGGCGATaGGGCTGGCCTGGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: LVTHHSFPLLSVCRLKKRRRGRR*GWPGPG
Trigger: TCCTGGACCAGGCCAGCCGCATCGCCGACCCCTGCG...TCGCTTCTTCAGGCGGCAGACGGATAGCAGCGGGAAAGAGTGGTGGGTGACCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579728.5
CDS-3UTR GCA 90 bp AGGGCAGTGAGGCGGGGAGCCCGGCCTCACCCATGTGTCCATGGTAGGGGGTGGCGAGACAGCAAAGGCTaGGATGTACACCATGCGCTC +
Preference number: 4 (lower is better)
Translates to: RAVRRGARPHPCVHGRGWRDSKG*DVHHAL
Trigger: GAGCGCATGGTGTACATCGCAGCCTTTGCTGTCTCG...CCACCCCCTACCATGGACACATGGGTGAGGCCGGGCTCCCCGCCTCACTGCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS-3UTR GCA 90 bp TTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGACAGGTGCCTTGGAGGGAGGGCCAGGGCTaGCCCTTTGGTCTCAAGGGC +
Preference number: 4 (lower is better)
Translates to: LHSHLRTRCRWVRGQVPWREGQG*PFGLKG
Trigger: GCCCTTGAGACCAAAGGGGCAGCCCTGGCCCTCCCT...CCAAGGCACCTGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp CCACCACTCTTTCCCGCTGCTATCCGTCTGCCGCCTGAAGAAGCGAGCCTGGTGGGGGGTGGGCTGAGATaGAGACCCTCTGGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: PPLFPAAIRLPPEEASLVGGGLR*RPSGQQ
Trigger: CTGCTGGCCAGAGGGTCTGCATCTCAGCCCACCCCC...CACCAGGCTCGCTTCTTCAGGCGGCAGACGGATAGCAGCGGGAAAGAGTGGTGG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp TTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGACAGGTGCCTTGGGGGGGTGGGCTGAGATaGAGACCCTCTGGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: LHSHLRTRCRWVRGQVPWGGGLR*RPSGQQ
Trigger: CTGCTGGCCAGAGGGTCTGCATCTCAGCCCACCCCC...CCAAGGCACCTGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAA
64% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp CTTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGACAGGTGCCTTGGGGTCAGAGGACAGGTaGCTTGGGCTGCTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: LTLTPAHSLPVGQRTGALGSEDR*LGLLPS
Trigger: GGAGGGGAGCAGCCCAAGGCACCTGTCCTCTGACCC...CAAGGCACCTGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp CCAGTAGGTATTGTTGGTCACCCACCACTCTTTCCCGCTGCTATCCGTCTGCCGCGGTGGGCTAGGCGGTaGGCACGCAGCTGCGCCACC +
Preference number: 4 (lower is better)
Translates to: PVGIVGHPPLFPAAIRLPRWARR*ARSCAT
Trigger: GGTGGCGCAGCTGCGTGCCCACCGCCTAGCCCACCG...CGGCAGACGGATAGCAGCGGGAAAGAGTGGTGGGTGACCAACAATACCTACTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp GAGGCAGACTGTGAGAAAGAGCAGCGATGTGGTGGACCCCCAGCAGGGGGAAGGGGTGGGCATAGTCTGTaGGTGGCAGCCCACGGGTGC +
Preference number: 4 (lower is better)
Translates to: EADCEKEQRCGGPPAGGRGGHSL*VAAHGC
Trigger: GCACCCGTGGGCTGCCACCCACAGACTATGCCCACC...CCTTCCCCCTGCTGGGGGTCCACCACATCGCTGCTCTTTCTCACAGTCTGCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp CTTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGACAGGTGCCTTGGAGTGGAGGCGCCTCTaGCCAGTGGAGGCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: LTLTPAHSLPVGQRTGALEWRRL*PVEASE
Trigger: CTCTGAGGCCTCCACTGGCCAGAGGCGCCTCCACTC...CAAGGCACCTGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp TTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGACAGGTGCCTTGGGAGTGGAGGCGCCTCTaGCCAGTGGAGGCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: LHSHLRTRCRWVRGQVPWEWRRL*PVEASE
Trigger: CTCTGAGGCCTCCACTGGCCAGAGGCGCCTCCACTC...CCAAGGCACCTGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp GGGAGCCCTGCTTGCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCTGAGGTGGACAGTGAGTaGAGGCGCCTCTGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: GSPACLQAGHRRTRIHSPEVDSE*RRLWPV
Trigger: CACTGGCCAGAGGCGCCTCCACTCACTGTCCACCTC...AGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGCAAGCAGGGCTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp GCCAGGGCTACCAGAGCACGGCCCCATCCATGTTCCCATAGCCTGGCTCGGCCCTTCCCAAAGAGTCGGTaGAGGACACGGCCACTCCGA +
Preference number: 4 (lower is better)
Translates to: ARATRARPHPCSHSLARPFPKSR*RTRPLR
Trigger: TCGGAGTGGCCGTGTCCTCCACCGACTCTTTGGGAA...GGGCCGAGCCAGGCTATGGGAACATGGATGGGGCCGTGCTCTGGTAGCCCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579728.5
CDS-3UTR CCA 90 bp GAGGCAGACTGTGAGAAAGAGCAGCGATGTGGTGGACCCCCAGCAGGGGGAAGGGATGCACTGGCCACCTaGCGTGGGTCCCCGGTACAG +
Preference number: 4 (lower is better)
Translates to: EADCEKEQRCGGPPAGGRDALAT*RGSPVQ
Trigger: CTGTACCGGGGACCCACGCCAGGTGGCCAGTGCATC...CCTTCCCCCTGCTGGGGGTCCACCACATCGCTGCTCTTTCTCACAGTCTGCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp GGGAGCCCTGCTTGCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCTTCTCACCCCAAACGGTaGGGTTGGGGGTGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: GSPACLQAGHRRTRIHSPSHPKR*GWGWAE
Trigger: CTCAGCCCACCCCCAACCCCACCGTTTGGGGTGAGA...AGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGCAAGCAGGGCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp TTCCCCTCCTCCAGGTACCTCTGGTCTGGCCGGAGTCTCGTGTCGGTGGAAGGCCTGGGGACAGAGGCCTaGGCACAGAAAGCCTGGGGA +
Preference number: 4 (lower is better)
Translates to: FPSSRYLWSGRSLVSVEGLGTEA*AQKAWG
Trigger: TCCCCAGGCTTTCTGTGCCCAGGCCTCTGTCCCCAG...GCCTTCCACCGACACGAGACTCCGGCCAGACCAGAGGTACCTGGAGGAGGGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp ACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGACAGGTGCCTTGGGCCTAACCAAAGGGAGCTaGAGAAGGCCCTGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: TLTPAHSLPVGQRTGALGLTKGS*RRPCRA
Trigger: GGCCCTGCAGGGCCTTCTCCAGCTCCCTTTGGTTAG...GCCCAAGGCACCTGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp AGGGAGCCCTGCTTGCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCAGAGCAGCGATGTGGTaGACCCCCAGCAGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: REPCLPASRAQAHTHTLSRAAMW*TPSRGK
Trigger: CTTCCCCCTGCTGGGGGTCCACCACATCGCTGCTCT...GGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGCAAGCAGGGCTCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp AGGGAGCCCTGCTTGCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCGAAAGAGCAGCGATGTaGTGGACCCCCAGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: REPCLPASRAQAHTHTLSERAAM*WTPSRG
Trigger: CCCCCTGCTGGGGGTCCACCACATCGCTGCTCTTTC...GGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGCAAGCAGGGCTCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR TCA 90 bp GCAGACTGTGAGAAAGAGCAGCGATGTGGTGGACCCCCAGCAGGGGGAAGGCGGAGCTCAGAGGCCTGCTaGGCACTGCTGGGCTTTGAG +
Preference number: 4 (lower is better)
Translates to: ADCEKEQRCGGPPAGGRRSSEAC*ALLGFE
Trigger: CTCAAAGCCCAGCAGTGCTCAGCAGGCCTCTGAGCT...CCGCCTTCCCCCTGCTGGGGGTCCACCACATCGCTGCTCTTTCTCACAGTCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR TCA 90 bp GAGGGAGCCCTGCTTGCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCCAGGAACCTTCCGGTaGGCAGTACTGGGCAGTGAG +
Preference number: 4 (lower is better)
Translates to: EGALLACKQGTGAHAYTLPGTFR*AVLGSE
Trigger: CTCACTGCCCAGTACTGCTCACCGGAAGGTTCCTGG...GAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGCAAGCAGGGCTCCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR TCA 90 bp TGGCTCGGCCCGCAGCCTCCAGTAGGTATTGTTGGTCACCCACCACTCTTTCCCCGGCCAGGACGCTGCTaGGGGAGCTGTGCACCTTCT +
Preference number: 4 (lower is better)
Translates to: WLGPQPPVGIVGHPPLFPRPGRC*GSCAPS
Trigger: AGAAGGTGCACAGCTCCCTCAGCAGCGTCCTGGCCG...GGGAAAGAGTGGTGGGTGACCAACAATACCTACTGGAGGCTGCGGGCCGAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
CDS-3UTR TCA 90 bp TGCTGGTTGTCTGGGGCAAGGAGACTGGGGAAGCACAGATTCTGCTTCTCACCCGGTCCCGTTCCATGGTaGGGGCGGCCAGGACGCTGC +
Preference number: 4 (lower is better)
Translates to: CWLSGARRLGKHRFCFSPGPVPW*GRPGRC
Trigger: GCAGCGTCCTGGCCGCCCTCACCATGGAACGGGACC...GGGTGAGAAGCAGAATCTGTGCTTCCCCAGTCTCCTTGCCCCAGACAACCAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR TCA 90 bp GGCAGAAGGGGAGGGAGAACAGATCACCTCCTCTCCTTCACTCACTGCAACCTCGGTCCCGTTCCATGGTaGGGGCGGCCAGGACGCTGC +
Preference number: 4 (lower is better)
Translates to: GRRGGRTDHLLSFTHCNLGPVPW*GRPGRC
Trigger: GCAGCGTCCTGGCCGCCCTCACCATGGAACGGGACC...GAGGTTGCAGTGAGTGAAGGAGAGGAGGTGATCTGTTCTCCCTCCCCTTCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR TCA 90 bp TTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGACAGGTGCCTTGGTGGAGGCAGGAGGAGTaGGGAACCAGAGCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: LHSHLRTRCRWVRGQVPWWRQEE*GTRASC
Trigger: GCAGGAGGCTCTGGTTCCTCACTCCTCCTGCCTCCA...CCAAGGCACCTGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR TCA 90 bp GCAGCTGCTCGATCCTTCTCTTCTGGGCCTCAGCGGCCTGTATGTTCCCCTCCTGGGGATCCGCTGAGCTaGGACGGGAGGGAACCGCTT +
Preference number: 4 (lower is better)
Translates to: AAARSFSSGPQRPVCSPPGDPLS*DGREPL
Trigger: AAGCGGTTCCCTCCCGTCTCAGCTCAGCGGATCCCC...AGGAGGGGAACATACAGGCCGCTGAGGCCCAGAAGAGAAGGATCGAGCAGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
CDS-3UTR TCA 90 bp TCAGAGGCAGACTGTGAGAAAGAGCAGCGATGTGGTGGACCCCCAGCAGGGGGACTCTGGGGGATCCGCTaGGCTGAGACGGGAGGGAAC +
Preference number: 4 (lower is better)
Translates to: SEADCEKEQRCGGPPAGGLWGIR*AETGGN
Trigger: GTTCCCTCCCGTCTCAGCTCAGCGGATCCCCCAGAG...TCCCCCTGCTGGGGGTCCACCACATCGCTGCTCTTTCTCACAGTCTGCCTCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR TCA 90 bp GCCCTGCTTGCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCTACATCTCTGGGGGATCCGCTaGGCTGAGACGGGAGGGAAC +
Preference number: 4 (lower is better)
Translates to: ALLACKQGTGAHAYTLLHLWGIR*AETGGN
Trigger: GTTCCCTCCCGTCTCAGCTCAGCGGATCCCCCAGAG...ATGTAGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGCAAGCAGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR TCA 90 bp GCCCTGCTTGCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCTACATGAAGGCGGGGCTACATaGGGGAGCCCTGCTTGCCTG +
Preference number: 4 (lower is better)
Translates to: ALLACKQGTGAHAYTLLHEGGAT*GSPACL
Trigger: CAGGCAAGCAGGGCTCCCTCATGTAGCCCCGCCTTC...ATGTAGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGCAAGCAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp GAGGCAGACTGTGAGAAAGAGCAGCGATGTGGTGGACCCCCAGCAGGGGGAAGGGGAGAGGCCACTCCCTaGTGGGGATGTAGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: EADCEKEQRCGGPPAGGRGEATP*WGCRAG
Trigger: CCCTGCTCTACATCCCCAGCAGGGAGTGGCCTCTCC...CCTTCCCCCTGCTGGGGGTCCACCACATCGCTGCTCTTTCTCACAGTCTGCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp GACAGGAGGGATGGCCAGGGACTAACCAAAGGGAGCTGGAGAAGGCCCTGCAGGGCTGAGGGGATTCGGTaGAGGGACTCCAGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: DRRDGQGLTKGSWRRPCRAEGIR*RDSRLW
Trigger: CCAGAGCCTGGAGTCCCTGCACCGAATCCCCTCAGC...CCTGCAGGGCCTTCTCCAGCTCCCTTTGGTTAGTCCCTGGCCATCCCTCCTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp ACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGACAGGTGCCTTGGGCGGGTGGTGGGAGACCTaGTCACTGATGAAGCGGAAG +
Preference number: 4 (lower is better)
Translates to: TLTPAHSLPVGQRTGALGGWWET*SLMKRK
Trigger: CTTCCGCTTCATCAGTGAGCAGGTCTCCCACCACCC...GCCCAAGGCACCTGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS-3UTR GCA 90 bp TCAGAGGCAGACTGTGAGAAAGAGCAGCGATGTGGTGGACCCCCAGCAGGGGGACACCTGCGCACTCGCTaGCGGTGGGTCAGAGGACAG +
Preference number: 4 (lower is better)
Translates to: SEADCEKEQRCGGPPAGGHLRTR*RWVRGQ
Trigger: CTGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTG...TCCCCCTGCTGGGGGTCCACCACATCGCTGCTCTTTCTCACAGTCTGCCTCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp AGGGAGCCCTGCTTGCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCACTTACACTCACACCTaGGCACTCGCTGCCGGTGGG +
Preference number: 4 (lower is better)
Translates to: REPCLPASRAQAHTHTLSTYTHT*ALAAGG
Trigger: CCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAGT...GGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGCAAGCAGGGCTCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp GAGGGAGCCCTGCTTGCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCAATCCAGCTGCCTCTaGCTTCAGGACCCCTCCACC +
Preference number: 4 (lower is better)
Translates to: EGALLACKQGTGAHAYTLQSSCL*LQDPST
Trigger: GGTGGAGGGGTCCTGAAGGCAGAGGCAGCTGGATTG...GAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGCAAGCAGGGCTCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579728.5
CDS-3UTR CCA 90 bp TCAGAGGCAGACTGTGAGAAAGAGCAGCGATGTGGTGGACCCCCAGCAGGGGGAGACGCCAGTACTCCTTaGCCCTTGCGCCGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: SEADCEKEQRCGGPPAGGDASTP*PLRRSA
Trigger: GGCAGAGCGGCGCAAGGGCCAAGGAGTACTGGCGTC...TCCCCCTGCTGGGGGTCCACCACATCGCTGCTCTTTCTCACAGTCTGCCTCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000613735.4
CDS-3UTR CCA 90 bp ACTCTCCTACATGAACTTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGGGCATGTCCAGGCGGTaGGCTAGGCGGTGGGCACGC +
Preference number: 4 (lower is better)
Translates to: TLLHELTLTPAHSLPVGQGMSRR*ARRWAR
Trigger: GCGTGCCCACCGCCTAGCCCACCGCCTGGACATGCC...CTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAGTTCATGTAGGAGAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp GAGGGAGCCCTGCTTGCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCGCTGCTGTTGGAAGCTaGGCACCAGGAACCTTCCGG +
Preference number: 4 (lower is better)
Translates to: EGALLACKQGTGAHAYTLAAVGS*APGTFR
Trigger: CCGGAAGGTTCCTGGTGCCCAGCTTCCAACAGCAGC...GAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGCAAGCAGGGCTCCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp TTGCGCCTGTCTCGCTGCAGCTGCTCGATCCTTCTCTTCTGGGCCTCAGCGGCCGCTGCTGTTGGAAGCTaGGCACCAGGAACCTTCCGG +
Preference number: 4 (lower is better)
Translates to: LRLSRCSCSILLFWASAAAAVGS*APGTFR
Trigger: CCGGAAGGTTCCTGGTGCCCAGCTTCCAACAGCAGC...GGCCGCTGAGGCCCAGAAGAGAAGGATCGAGCAGCTGCAGCGAGACAGGCGCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp CATAGCCTGGCTCGGCCCGCAGCCTCCAGTAGGTATTGTTGGTCACCCACCACTGGCATAGTCTGTGGGTaGCAGCCCACGGGTGCCCGA +
Preference number: 4 (lower is better)
Translates to: HSLARPAASSRYCWSPTTGIVCG*QPTGAR
Trigger: TCGGGCACCCGTGGGCTGCCACCCACAGACTATGCC...AGTGGTGGGTGACCAACAATACCTACTGGAGGCTGCGGGCCGAGCCAGGCTATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp GACTTTGCGCCTGTCTCGCTGCAGCTGCTCGATCCTTCTCTTCTGGGCCTCAGCGGCATAGTCTGTGGGTaGCAGCCCACGGGTGCCCGA +
Preference number: 4 (lower is better)
Translates to: DFAPVSLQLLDPSLLGLSGIVCG*QPTGAR
Trigger: TCGGGCACCCGTGGGCTGCCACCCACAGACTATGCC...GCTGAGGCCCAGAAGAGAAGGATCGAGCAGCTGCAGCGAGACAGGCGCAAAGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp GCAGCTGCTCGATCCTTCTCTTCTGGGCCTCAGCGGCCTGTATGTTCCCCTCCTGGTGGGCATAGTCTGTaGGTGGCAGCCCACGGGTGC +
Preference number: 4 (lower is better)
Translates to: AAARSFSSGPQRPVCSPPGGHSL*VAAHGC
Trigger: GCACCCGTGGGCTGCCACCCACAGACTATGCCCACC...AGGAGGGGAACATACAGGCCGCTGAGGCCCAGAAGAGAAGGATCGAGCAGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp GGGGAGGGAGAACAGATCACCTCCTCTCCTTCACTCACTGCAACCTCACCGCTGGGCGCCTCTGGCCAGTaGAGGCCTCAGAGACCCCCA +
Preference number: 4 (lower is better)
Translates to: GEGEQITSSPSLTATSPLGASGQ*RPQRPP
Trigger: TGGGGGTCTCTGAGGCCTCCACTGGCCAGAGGCGCC...CAGCGGTGAGGTTGCAGTGAGTGAAGGAGAGGAGGTGATCTGTTCTCCCTCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000007414.8
ENST00000579728.5
CDS-3UTR CCA 90 bp TGGCCGGAGTCTCGTGTCGGTGGAAGGCAGCGACCGTTTCAGCTCTGCTGTCAGGAGGTGGACAGTGAGTaGAGGCGCCTCTGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: WPESRVGGRQRPFQLCCQEVDSE*RRLWPV
Trigger: CACTGGCCAGAGGCGCCTCCACTCACTGTCCACCTC...CTGACAGCAGAGCTGAAACGGTCGCTGCCTTCCACCGACACGAGACTCCGGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp TCAGAGGCAGACTGTGAGAAAGAGCAGCGATGTGGTGGACCCCCAGCAGGGGGAGATGCACTGGCCACCTaGCGTGGGTCCCCGGTACAG +
Preference number: 4 (lower is better)
Translates to: SEADCEKEQRCGGPPAGGDALAT*RGSPVQ
Trigger: CTGTACCGGGGACCCACGCCAGGTGGCCAGTGCATC...TCCCCCTGCTGGGGGTCCACCACATCGCTGCTCTTTCTCACAGTCTGCCTCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp GGGAGCCCTGCTTGCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCTCAGGTACCTCTGGTCTaGCCGGAGTCTCGTGTCGGT +
Preference number: 4 (lower is better)
Translates to: GSPACLQAGHRRTRIHSPQVPLV*PESRVG
Trigger: ACCGACACGAGACTCCGGCCAGACCAGAGGTACCTG...AGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGCAAGCAGGGCTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp GCAGACTGTGAGAAAGAGCAGCGATGTGGTGGACCCCCAGCAGGGGGAAGGCGGCAGGTACCTCTGGTCTaGCCGGAGTCTCGTGTCGGT +
Preference number: 4 (lower is better)
Translates to: ADCEKEQRCGGPPAGGRRQVPLV*PESRVG
Trigger: ACCGACACGAGACTCCGGCCAGACCAGAGGTACCTG...CCGCCTTCCCCCTGCTGGGGGTCCACCACATCGCTGCTCTTTCTCACAGTCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp TCCTCCAGGTACCTCTGGTCTGGCCGGAGTCTCGTGTCGGTGGAAGGCAGCGACTCCTCCAGGTACCTCTaGTCTGGCCGGAGTCTCGTG +
Preference number: 4 (lower is better)
Translates to: SSRYLWSGRSLVSVEGSDSSRYL*SGRSLV
Trigger: CACGAGACTCCGGCCAGACCAGAGGTACCTGGAGGA...GTCGCTGCCTTCCACCGACACGAGACTCCGGCCAGACCAGAGGTACCTGGAGGA
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578461.1
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp GGGGCCAGGGCTACCAGAGCACGGCCCCATCCATGTTCCCATAGCCTGGCTCGGCTGGGGCAAGGAGACTaGGGAAGCACAGATTCTGCT +
Preference number: 4 (lower is better)
Translates to: GARATRARPHPCSHSLARLGQGD*GSTDSA
Trigger: AGCAGAATCTGTGCTTCCCCAGTCTCCTTGCCCCAG...CCGAGCCAGGCTATGGGAACATGGATGGGGCCGTGCTCTGGTAGCCCTGGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp TTGCGCCTGTCTCGCTGCAGCTGCTCGATCCTTCTCTTCTGGGCCTCAGCGGCCTGGGCACAGAAAGCCTaGGGAGCGTCAAGGAGTCCC +
Preference number: 4 (lower is better)
Translates to: LRLSRCSCSILLFWASAAWAQKA*GASRSP
Trigger: GGGACTCCTTGACGCTCCCCAGGCTTTCTGTGCCCA...GGCCGCTGAGGCCCAGAAGAGAAGGATCGAGCAGCTGCAGCGAGACAGGCGCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp CCCATAGCCTGGCTCGGCCCGCAGCCTCCAGTAGGTATTGTTGGTCACCCACCACTGGGGACAGAGGCCTaGGCACAGAAAGCCTGGGGA +
Preference number: 4 (lower is better)
Translates to: PIAWLGPQPPVGIVGHPPLGTEA*AQKAWG
Trigger: TCCCCAGGCTTTCTGTGCCCAGGCCTCTGTCCCCAG...TGGTGGGTGACCAACAATACCTACTGGAGGCTGCGGGCCGAGCCAGGCTATGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp AGCCGGCTCGGTGGTATGTGGAGGAGTAGGCCGAGACAGCAAAGGCTGCGATGTCGCACTCGCTGCCGGTaGGTCAGAGGACAGGTGCCT +
Preference number: 4 (lower is better)
Translates to: SRLGGMWRSRPRQQRLRCRTRCR*VRGQVP
Trigger: AGGCACCTGTCCTCTGACCCACCGGCAGCGAGTGCG...ACATCGCAGCCTTTGCTGTCTCGGCCTACTCCTCCACATACCACCGAGCCGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579728.5
CDS-3UTR CCA 90 bp TGGCCGGAGTCTCGTGTCGGTGGAAGGCAGCGACCGTTTCAGCTCTGCTGTCAGAGAGCAGCGATGTGGTaGACCCCCAGCAGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: WPESRVGGRQRPFQLCCQRAAMW*TPSRGK
Trigger: CTTCCCCCTGCTGGGGGTCCACCACATCGCTGCTCT...CTGACAGCAGAGCTGAAACGGTCGCTGCCTTCCACCGACACGAGACTCCGGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp TTTGCGCCTGTCTCGCTGCAGCTGCTCGATCCTTCTCTTCTGGGCCTCAGCGGCAGAGCAGCGATGTGGTaGACCCCCAGCAGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: FAPVSLQLLDPSLLGLSGRAAMW*TPSRGK
Trigger: CTTCCCCCTGCTGGGGGTCCACCACATCGCTGCTCT...GCCGCTGAGGCCCAGAAGAGAAGGATCGAGCAGCTGCAGCGAGACAGGCGCAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp CTTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGACAGGTGCCTTGGAAAGAGCAGCGATGTaGTGGACCCCCAGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: LTLTPAHSLPVGQRTGALERAAM*WTPSRG
Trigger: CCCCCTGCTGGGGGTCCACCACATCGCTGCTCTTTC...CAAGGCACCTGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp GCACAGAAAGCCTGGGGAGCGTCAAGGAGTCCCCTGTGTCCTAGGAAGGCACTGTGCCCAGCCCCGCCTTaGGCACATACTCTGGGGCTC +
Preference number: 4 (lower is better)
Translates to: AQKAWGASRSPLCPRKALCPAPP*AHTLGL
Trigger: GAGCCCCAGAGTATGTGCCCAAGGCGGGGCTGGGCA...CAGTGCCTTCCTAGGACACAGGGGACTCCTTGACGCTCCCCAGGCTTTCTGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000579728.5
CDS-3UTR CCA 90 bp GGCATTGAGTTGGGTTTCCAGATGCACTGGCCACCTGGCGTGGGTCCCCGGTACACTGGCCACCTGGCGTaGGTCCCCGGTACAGAGCTT +
Preference number: 4 (lower is better)
Translates to: GIELGFQMHWPPGVGPRYTGHLA*VPGTEL
Trigger: AAGCTCTGTACCGGGGACCCACGCCAGGTGGCCAGT...GTACCGGGGACCCACGCCAGGTGGCCAGTGCATCTGGAAACCCAACTCAATGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613735.4
CDS-3UTR TCA 90 bp CTACATGAACTTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGACACCCTCCTCACCGCGCTaGGCAGTGGCAGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: LHELTLTPAHSLPVGQRTPSSPR*AVAAAA
Trigger: AGCAGCTGCTGCCACTGCTCAGCGCGGTGAGGAGGG...TGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAGTTCATGTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000613735.4
CDS-3UTR TCA 90 bp GAGCCCTGCTTGCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCTACAGCACTGCTGGGCTTTaGGGACTGAGCGCTCTCAGG +
Preference number: 4 (lower is better)
Translates to: EPCLPASRAQAHTHTLSYSTAGL*GLSALR
Trigger: CCTGAGAGCGCTCAGTCCTCAAAGCCCAGCAGTGCT...GTAGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGCAAGCAGGGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR TCA 90 bp GACAGGAGGGATGGCCAGGGACTAACCAAAGGGAGCTGGAGAAGGCCCTGCAGGCCAGGAACCTTCCGGTaGGCAGTACTGGGCAGTGAG +
Preference number: 4 (lower is better)
Translates to: DRRDGQGLTKGSWRRPCRPGTFR*AVLGSE
Trigger: CTCACTGCCCAGTACTGCTCACCGGAAGGTTCCTGG...CCTGCAGGGCCTTCTCCAGCTCCCTTTGGTTAGTCCCTGGCCATCCCTCCTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR TCA 90 bp GCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCTACATGAACTTACAGGTCCCGTTCCATGGTaGGGGCGGCCAGGACGCTGC +
Preference number: 4 (lower is better)
Translates to: ACKQGTGAHAYTLLHELTGPVPW*GRPGRC
Trigger: GCAGCGTCCTGGCCGCCCTCACCATGGAACGGGACC...TGTAAGTTCATGTAGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR TCA 90 bp AACTTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGACAGGTGCCTAGCGCTCAGCTCCCCTaGGGTCCAGCATCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: NLHSHLRTRCRWVRGQVPSAQLP*GPASPQ
Trigger: CTGAGGAGATGCTGGACCTCAGGGGAGCTGAGCGCT...AGGCACCTGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS-3UTR TCA 90 bp TCAGAGGCAGACTGTGAGAAAGAGCAGCGATGTGGTGGACCCCCAGCAGGGGGATGGAGGCAGGAGGAGTaGGGAACCAGAGCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: SEADCEKEQRCGGPPAGGWRQEE*GTRASC
Trigger: GCAGGAGGCTCTGGTTCCTCACTCCTCCTGCCTCCA...TCCCCCTGCTGGGGGTCCACCACATCGCTGCTCTTTCTCACAGTCTGCCTCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR TCA 90 bp AGGGCAGTGAGGCGGGGAGCCCGGCCTCACCCATGTGTCCATGGTAGGGGGTGGGTCCTAGGAAGGCACTaGAATAGGGAACAGATCCTG +
Preference number: 4 (lower is better)
Translates to: RAVRRGARPHPCVHGRGWVLGRH*NREQIL
Trigger: CAGGATCTGTTCCCTATTTCAGTGCCTTCCTAGGAC...CCACCCCCTACCATGGACACATGGGTGAGGCCGGGCTCCCCGCCTCACTGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR TCA 90 bp TCAGAGGCAGACTGTGAGAAAGAGCAGCGATGTGGTGGACCCCCAGCAGGGGGACGGGAGGGAACCGCTTaGGGATCAGGGACGAAGGAG +
Preference number: 4 (lower is better)
Translates to: SEADCEKEQRCGGPPAGGREGTA*GSGTKE
Trigger: CTCCTTCGTCCCTGATCCTCAAGCGGTTCCCTCCCG...TCCCCCTGCTGGGGGTCCACCACATCGCTGCTCTTTCTCACAGTCTGCCTCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR TCA 90 bp GACAGGAGGGATGGCCAGGGACTAACCAAAGGGAGCTGGAGAAGGCCCTGCAGGATGGGTCTCCCTTTCTaGCAGCGCTCAGCTCCCCTG +
Preference number: 4 (lower is better)
Translates to: DRRDGQGLTKGSWRRPCRMGLPF*QRSAPL
Trigger: CAGGGGAGCTGAGCGCTGTCAGAAAGGGAGACCCAT...CCTGCAGGGCCTTCTCCAGCTCCCTTTGGTTAGTCCCTGGCCATCCCTCCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579728.5
CDS-3UTR GCA 90 bp GACAGGAGGGATGGCCAGGGACTAACCAAAGGGAGCTGGAGAAGGCCCTGCAGGGTACTCCTTGGCCCTTaGGCCGCTCTGCCTCTGAGT +
Preference number: 4 (lower is better)
Translates to: DRRDGQGLTKGSWRRPCRVLLGP*AALPLS
Trigger: ACTCAGAGGCAGAGCGGCGCAAGGGCCAAGGAGTAC...CCTGCAGGGCCTTCTCCAGCTCCCTTTGGTTAGTCCCTGGCCATCCCTCCTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000613735.4
CDS-3UTR GCA 90 bp GGAGCCCTGCTTGCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCTAGTACTCCTTGGCCCTTaGGCCGCTCTGCCTCTGAGT +
Preference number: 4 (lower is better)
Translates to: GALLACKQGTGAHAYTLLVLLGP*AALPLS
Trigger: ACTCAGAGGCAGAGCGGCGCAAGGGCCAAGGAGTAC...TAGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGCAAGCAGGGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000613735.4
CDS-3UTR GCA 90 bp TCCTCCAGGTACCTCTGGTCTGGCCGGAGTCTCGTGTCGGTGGAAGGCAGCGACCAGCAAGGGACAGGATaGTGGTCTGCGATAGCTGGG +
Preference number: 4 (lower is better)
Translates to: SSRYLWSGRSLVSVEGSDQQGTG*WSAIAG
Trigger: CCCAGCTATCGCAGACCAGCATCCTGTCCCTTGCTG...GTCGCTGCCTTCCACCGACACGAGACTCCGGCCAGACCAGAGGTACCTGGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579728.5
CDS-3UTR GCA 90 bp GCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCTACATGAACTTACACGCAGGGGTCGGCGATaGGGCTGGCCTGGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: ACKQGTGAHAYTLLHELTRRGRR*GWPGPG
Trigger: TCCTGGACCAGGCCAGCCGCATCGCCGACCCCTGCG...TGTAAGTTCATGTAGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS-3UTR GCA 90 bp GAGCCCTGCTTGCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCTACCGGTACAGCCCCTCGTaGCACTTCCCAAAGAGTCGG +
Preference number: 4 (lower is better)
Translates to: EPCLPASRAQAHTHTLSYRYSPS*HFPKSR
Trigger: CCGACTCTTTGGGAAGTGGCACGAGGGGCTGTACCG...GTAGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGCAAGCAGGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS-3UTR GCA 90 bp ACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGACAGGTGCCTTGGGCCTGTCTCGCTGCAGCTaGTCGATCCTTCTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: TLTPAHSLPVGQRTGALGLSRCS*SILLFW
Trigger: CCAGAAGAGAAGGATCGAGCAGCTGCAGCGAGACAG...GCCCAAGGCACCTGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp GAGGGAGCCCTGCTTGCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCTCTCCTTCACTCACTaGAACCTCACCGCTGGGGAC +
Preference number: 4 (lower is better)
Translates to: EGALLACKQGTGAHAYTLLSFTH*NLTAGD
Trigger: GTCCCCAGCGGTGAGGTTGCAGTGAGTGAAGGAGAG...GAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGCAAGCAGGGCTCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp TCAGAGGCAGACTGTGAGAAAGAGCAGCGATGTGGTGGACCCCCAGCAGGGGGAAGCTGGAGAAGGCCCTaGAGGGCCAGGGAAGGGGAA +
Preference number: 4 (lower is better)
Translates to: SEADCEKEQRCGGPPAGGSWRRP*RAREGE
Trigger: TTCCCCTTCCCTGGCCCTGCAGGGCCTTCTCCAGCT...TCCCCCTGCTGGGGGTCCACCACATCGCTGCTCTTTCTCACAGTCTGCCTCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp GGAGCCCTGCTTGCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCTAACTTACACTCACACCTaGGCACTCGCTGCCGGTGGG +
Preference number: 4 (lower is better)
Translates to: GALLACKQGTGAHAYTLLTYTHT*ALAAGG
Trigger: CCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAGT...TAGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGCAAGCAGGGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp CCACCACTCTTTCCCGCTGCTATCCGTCTGCCGCCTGAAGAAGCGAGCCTGGTGACTTACACTCACACCTaGGCACTCGCTGCCGGTGGG +
Preference number: 4 (lower is better)
Translates to: PPLFPAAIRLPPEEASLVTYTHT*ALAAGG
Trigger: CCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAGT...CACCAGGCTCGCTTCTTCAGGCGGCAGACGGATAGCAGCGGGAAAGAGTGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp GACAGGAGGGATGGCCAGGGACTAACCAAAGGGAGCTGGAGAAGGCCCTGCAGGAGGACCCCTCCACCCTaGCACCGTAGCTCAGAGACT +
Preference number: 4 (lower is better)
Translates to: DRRDGQGLTKGSWRRPCRRTPPP*HRSSET
Trigger: AGTCTCTGAGCTACGGTGGCAGGGTGGAGGGGTCCT...CCTGCAGGGCCTTCTCCAGCTCCCTTTGGTTAGTCCCTGGCCATCCCTCCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579728.5
CDS-3UTR GCA 90 bp CTTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGACAGGTGCCTTGCCTCCTCAATCCAGCTaGCTCTGCCTTCAGGACCCC +
Preference number: 4 (lower is better)
Translates to: LTLTPAHSLPVGQRTGALPPQSS*LCLQDP
Trigger: GGGGTCCTGAAGGCAGAGGCAGCTGGATTGAGGAGG...CAAGGCACCTGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579728.5
CDS-3UTR GCA 90 bp TCAGAGGCAGACTGTGAGAAAGAGCAGCGATGTGGTGGACCCCCAGCAGGGGGAAGCCTCTCCCAAGTCTaGCCCTCTGTCCCGACCCCA +
Preference number: 4 (lower is better)
Translates to: SEADCEKEQRCGGPPAGGSLSQV*PSVPTP
Trigger: TGGGGTCGGGACAGAGGGGCAGACTTGGGAGAGGCT...TCCCCCTGCTGGGGGTCCACCACATCGCTGCTCTTTCTCACAGTCTGCCTCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000579728.5
CDS-3UTR GCA 90 bp CAAAGGCTGCGATGTACACCATGCGCTCGCAGGGGTCGGCGATGCGGCTGGCCTTACCCTCTGCTCACCTaGCAAGCCTCTCCCAAGTCT +
Preference number: 4 (lower is better)
Translates to: QRLRCTPCARRGRRCGWPYPLLT*QASPKS
Trigger: AGACTTGGGAGAGGCTTGGCAGGTGAGCAGAGGGTA...AGGCCAGCCGCATCGCCGACCCCTGCGAGCGCATGGTGTACATCGCAGCCTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579728.5
CDS-3UTR GCA 90 bp CCACCACTCTTTCCCGCTGCTATCCGTCTGCCGCCTGAAGAAGCGAGCCTGGTGACCCTGACCCAGATCTaGTATCGGACCCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: PPLFPAAIRLPPEEASLVTLTQI*YRTPGW
Trigger: CCAGCCTGGGGTCCGATAGCAGATCTGGGTCAGGGT...CACCAGGCTCGCTTCTTCAGGCGGCAGACGGATAGCAGCGGGAAAGAGTGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613735.4
CDS-3UTR CCA 90 bp GAGGCAGACTGTGAGAAAGAGCAGCGATGTGGTGGACCCCCAGCAGGGGGAAGGCCTGCTGAGCACTGCTaGGCTTTGAGGACTGAGCGC +
Preference number: 4 (lower is better)
Translates to: EADCEKEQRCGGPPAGGRPAEHC*ALRTER
Trigger: GCGCTCAGTCCTCAAAGCCCAGCAGTGCTCAGCAGG...CCTTCCCCCTGCTGGGGGTCCACCACATCGCTGCTCTTTCTCACAGTCTGCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp CAGACTGTGAGAAAGAGCAGCGATGTGGTGGACCCCCAGCAGGGGGAAGGCGGGACAGCCGGACATCGATaGAGCCATGGAGCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: QTVRKSSDVVDPQQGEGGTAGHR*SHGASP
Trigger: AGGGGAAGCTCCATGGCTCCATCGATGTCCGGCTGT...CCCGCCTTCCCCCTGCTGGGGGTCCACCACATCGCTGCTCTTTCTCACAGTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp CCTCCAGTAGGTATTGTTGGTCACCCACCACTCTTTCCCGCTGCTATCCGTCTGGGCATGTCCAGGCGGTaGGCTAGGCGGTGGGCACGC +
Preference number: 4 (lower is better)
Translates to: PPVGIVGHPPLFPAAIRLGMSRR*ARRWAR
Trigger: GCGTGCCCACCGCCTAGCCCACCGCCTGGACATGCC...CAGACGGATAGCAGCGGGAAAGAGTGGTGGGTGACCAACAATACCTACTGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp CAAAGGCTGCGATGTACACCATGCGCTCGCAGGGGTCGGCGATGCGGCTGGCCTGGTAGCGAGACAGGTTaGGAACAGAGCCATGGAGAC +
Preference number: 4 (lower is better)
Translates to: QRLRCTPCARRGRRCGWPGSETG*EQSHGD
Trigger: GTCTCCATGGCTCTGTTCCCAACCTGTCTCGCTACC...AGGCCAGCCGCATCGCCGACCCCTGCGAGCGCATGGTGTACATCGCAGCCTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579728.5
CDS-3UTR CCA 90 bp TGTGTTTCGGATGAGCACCTCCCCATAGTGCTCGATCCAGCGCTGACCACTCAGGGCGCCTCTGGCCAGTaGAGGCCTCAGAGACCCCCA +
Preference number: 4 (lower is better)
Translates to: CVSDEHLPIVLDPALTTQGASGQ*RPQRPP
Trigger: TGGGGGTCTCTGAGGCCTCCACTGGCCAGAGGCGCC...CTGAGTGGTCAGCGCTGGATCGAGCACTATGGGGAGGTGCTCATCCGAAACACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579728.5
CDS-3UTR CCA 90 bp GAGGGAGCCCTGCTTGCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCTTCCCAAAGAGTCGGTaGAGGACACGGCCACTCCGA +
Preference number: 4 (lower is better)
Translates to: EGALLACKQGTGAHAYTLFPKSR*RTRPLR
Trigger: TCGGAGTGGCCGTGTCCTCCACCGACTCTTTGGGAA...GAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGCAAGCAGGGCTCCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS-3UTR CCA 90 bp GCAGCTGCTCGATCCTTCTCTTCTGGGCCTCAGCGGCCTGTATGTTCCCCTCCTGGTTTCCAGATGCACTaGCCACCTGGCGTGGGTCCC +
Preference number: 4 (lower is better)
Translates to: AAARSFSSGPQRPVCSPPGFQMH*PPGVGP
Trigger: GGGACCCACGCCAGGTGGCCAGTGCATCTGGAAACC...AGGAGGGGAACATACAGGCCGCTGAGGCCCAGAAGAGAAGGATCGAGCAGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578461.1
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp TCCCATAGCCTGGCTCGGCCCGCAGCCTCCAGTAGGTATTGTTGGTCACCCACCCAGGTACCTCTGGTCTaGCCGGAGTCTCGTGTCGGT +
Preference number: 4 (lower is better)
Translates to: SHSLARPAASSRYCWSPTQVPLV*PESRVG
Trigger: ACCGACACGAGACTCCGGCCAGACCAGAGGTACCTG...GGTGGGTGACCAACAATACCTACTGGAGGCTGCGGGCCGAGCCAGGCTATGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578461.1
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp ACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGACAGGTGCCTTGGGCTCGATCCTTCTCTTCTaGGCCTCAGCGGCCTGTATG +
Preference number: 4 (lower is better)
Translates to: TLTPAHSLPVGQRTGALGSILLF*ASAACM
Trigger: CATACAGGCCGCTGAGGCCCAGAAGAGAAGGATCGA...GCCCAAGGCACCTGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp AACTTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGACAGGTGCCTCATGTTCCCATAGCCTaGCTCGGCCCGCAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: NLHSHLRTRCRWVRGQVPHVPIA*LGPQPP
Trigger: TGGAGGCTGCGGGCCGAGCCAGGCTATGGGAACATG...AGGCACCTGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp CATAGCCTGGCTCGGCCCGCAGCCTCCAGTAGGTATTGTTGGTCACCCACCACTTCTCACCCCAAACGGTaGGGTTGGGGGTGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: HSLARPAASSRYCWSPTTSHPKR*GWGWAE
Trigger: CTCAGCCCACCCCCAACCCCACCGTTTGGGGTGAGA...AGTGGTGGGTGACCAACAATACCTACTGGAGGCTGCGGGCCGAGCCAGGCTATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp ACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGACAGGTGCCTTGGGCATAGGGAACAGATCCTaGGAGCCAGAGTCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: TLTPAHSLPVGQRTGALGIGNRS*EPESPP
Trigger: TGGGGGAGACTCTGGCTCCCAGGATCTGTTCCCTAT...GCCCAAGGCACCTGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp AGCGGGAAGGGTCTTACATGCTGGTTGTCTGGGGCAAGGAGACTGGGGAAGCACCTGCAACCTCACCGCTaGGGACAGAGGCCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: SGKGLTCWLSGARRLGKHLQPHR*GQRPGH
Trigger: GTGCCCAGGCCTCTGTCCCCAGCGGTGAGGTTGCAG...GTGCTTCCCCAGTCTCCTTGCCCCAGACAACCAGCATGTAAGACCCTTCCCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp CCCATAGCCTGGCTCGGCCCGCAGCCTCCAGTAGGTATTGTTGGTCACCCACCACTAACCAAAGGGAGCTaGAGAAGGCCCTGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: PIAWLGPQPPVGIVGHPPLTKGS*RRPCRA
Trigger: GGCCCTGCAGGGCCTTCTCCAGCTCCCTTTGGTTAG...TGGTGGGTGACCAACAATACCTACTGGAGGCTGCGGGCCGAGCCAGGCTATGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp TTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGACAGGTGCCTTGGAGAGGACAGGTGCCTTaGGCTGCTCCCCTCCTCATG +
Preference number: 4 (lower is better)
Translates to: LHSHLRTRCRWVRGQVPWRGQVP*AAPLLM
Trigger: CATGAGGAGGGGAGCAGCCCAAGGCACCTGTCCTCT...CCAAGGCACCTGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp TCTGGTCTGGCCGGAGTCTCGTGTCGGTGGAAGGCAGCGACCGTTTCAGCTCTGAGAGGACAGGTGCCTTaGGCTGCTCCCCTCCTCATG +
Preference number: 4 (lower is better)
Translates to: SGLAGVSCRWKAATVSALRGQVP*AAPLLM
Trigger: CATGAGGAGGGGAGCAGCCCAAGGCACCTGTCCTCT...CAGAGCTGAAACGGTCGCTGCCTTCCACCGACACGAGACTCCGGCCAGACCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp AACTTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGACAGGTGCCTGAAAGAGCAGCGATGTaGTGGACCCCCAGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: NLHSHLRTRCRWVRGQVPERAAM*WTPSRG
Trigger: CCCCCTGCTGGGGGTCCACCACATCGCTGCTCTTTC...AGGCACCTGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp GTTTTCCTCCATGACTTTGCGCCTGTCTCGCTGCAGCTGCTCGATCCTTCTCTTACAGGCCGGGCAGACTaGGCCTCCCCCGGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: VFLHDFAPVSLQLLDPSLTGRAD*ASPGQL
Trigger: CAGCTGCCCGGGGGAGGCCCAGTCTGCCCGGCCTGT...AAGAGAAGGATCGAGCAGCTGCAGCGAGACAGGCGCAAAGTCATGGAGGAAAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579728.5
CDS-3UTR CCA 90 bp AGGGGAGGGAGAACAGATCACCTCCTCTCCTTCACTCACTGCAACCTCACCGCTGCAGCGACGGCGGGGTaGCCCCATGGGTCTCCCTTT +
Preference number: 4 (lower is better)
Translates to: RGGRTDHLLSFTHCNLTAAATAG*PHGSPF
Trigger: AAAGGGAGACCCATGGGGCCACCCCGCCGTCGCTGC...AGCGGTGAGGTTGCAGTGAGTGAAGGAGAGGAGGTGATCTGTTCTCCCTCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000579728.5
3UTR CAA 72 bp GTGGGTCCCCGGTACAGAGCTTCTTGCTCCTCAGGGTaGAGGGAGCTGAAAGAGTCCGCCGTGGTGTCGGAG +
Preference number: 4 (lower is better)
Translates to: VGPRYRASCSSG*RELKESAVVSE
Trigger: CTCCGACACCACGGCGGACTCTTTCAGCTCCCTCAACCCTGAGGAGCAAGAAGCTCTGTACCGGGGACCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613735.4
CDS-3UTR TCA 90 bp GGGGAGGGAGAACAGATCACCTCCTCTCCTTCACTCACTGCAACCTCACCGCTGAGCGCTCAGCTCCCCTaGGGTCCAGCATCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: GEGEQITSSPSLTATSPLSAQLP*GPASPQ
Trigger: CTGAGGAGATGCTGGACCTCAGGGGAGCTGAGCGCT...CAGCGGTGAGGTTGCAGTGAGTGAAGGAGAGGAGGTGATCTGTTCTCCCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000007414.8
ENST00000579728.5
CDS-3UTR TCA 90 bp TACACTCTCCTACATGAACTTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCCCCCAGGACAGGGTTaGAGGGCTTGCAGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: YTLLHELTLTPAHSLPVGPPGQG*RACSRL
Trigger: GAGCCGGCTGCAAGCCCTTCAACCCTGTCCTGGGGG...ACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAGTTCATGTAGGAGAGTGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS-3UTR TCA 90 bp GGGACAGGAATCGGAATGGTGAAGCGGGAAGGGTCTTACATGCTGGTTGTCTGGCACGGCCACTCCGACTaGGCACAGCGCCCTGCACCT +
Preference number: 4 (lower is better)
Translates to: GTGIGMVKREGSYMLVVWHGHSD*AQRPAP
Trigger: AGGTGCAGGGCGCTGTGCTCAGTCGGAGTGGCCGTG...CCAGACAACCAGCATGTAAGACCCTTCCCGCTTCACCATTCCGATTCCTGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000007414.8
ENST00000579728.5
CDS-3UTR TCA 90 bp GGGGCCAGGGCTACCAGAGCACGGCCCCATCCATGTTCCCATAGCCTGGCTCGGTGTTGTTTTCCTCCATaGCTTTGCGCCTGTCTCGCT +
Preference number: 4 (lower is better)
Translates to: GARATRARPHPCSHSLARCCFPP*LCACLA
Trigger: AGCGAGACAGGCGCAAAGTCATGGAGGAAAACAACA...CCGAGCCAGGCTATGGGAACATGGATGGGGCCGTGCTCTGGTAGCCCTGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000578461.1
ENST00000579728.5
ENST00000613735.4
CDS-3UTR TCA 90 bp TCCAGTAGGTATTGTTGGTCACCCACCACTCTTTCCCGCTGCTATCCGTCTGCCGGGTTGGGGGTGGGCTaGGATGCAGACCCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: SSRYCWSPTTLSRCYPSAGLGVG*DADPLA
Trigger: GGCCAGAGGGTCTGCATCTCAGCCCACCCCCAACCC...GGCAGACGGATAGCAGCGGGAAAGAGTGGTGGGTGACCAACAATACCTACTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
CDS-3UTR TCA 90 bp TCCTCCATGACTTTGCGCCTGTCTCGCTGCAGCTGCTCGATCCTTCTCTTCTGGCTCTGGGGGATCCGCTaGGCTGAGACGGGAGGGAAC +
Preference number: 4 (lower is better)
Translates to: SSMTLRLSRCSCSILLFWLWGIR*AETGGN
Trigger: GTTCCCTCCCGTCTCAGCTCAGCGGATCCCCCAGAG...CCAGAAGAGAAGGATCGAGCAGCTGCAGCGAGACAGGCGCAAAGTCATGGAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp GAGGCAGACTGTGAGAAAGAGCAGCGATGTGGTGGACCCCCAGCAGGGGGAAGGTCTGGGTGCACCACATaGGGCTTGTCCGTTTCCCCT +
Preference number: 4 (lower is better)
Translates to: EADCEKEQRCGGPPAGGRSGCTT*GLSVSP
Trigger: AGGGGAAACGGACAAGCCGCATGTGGTGCACCCAGA...CCTTCCCCCTGCTGGGGGTCCACCACATCGCTGCTCTTTCTCACAGTCTGCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp GAGCCCTGCTTGCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCTACTGGCAAAGCTCTGGGTaGACCACATGCGGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: EPCLPASRAQAHTHTLSYWQSSG*TTCGLS
Trigger: GGACAAGCCGCATGTGGTGCACCCAGAGCTTTGCCA...GTAGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGCAAGCAGGGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp AGTCTCGTGTCGGTGGAAGGCAGCGACCGTTTCAGCTCTGCTGTCAGCTCATTCCTGCTGAGGGAGCTGTaGACCTTCTGGGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: SLVSVEGSDRFSSAVSSFLLREL*TFWARA
Trigger: GGCCCTGGCCCAGAAGGTGCACAGCTCCCTCAGCAG...GAATGAGCTGACAGCAGAGCTGAAACGGTCGCTGCCTTCCACCGACACGAGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp TTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGACAGGTGCCTTGGGGGTGGTGGGAGACCTaGTCACTGATGAAGCGGAAG +
Preference number: 4 (lower is better)
Translates to: LHSHLRTRCRWVRGQVPWGWWET*SLMKRK
Trigger: CTTCCGCTTCATCAGTGAGCAGGTCTCCCACCACCC...CCAAGGCACCTGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS-3UTR GCA 90 bp TTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGACAGGTGCCTTGGCTGAGCACAGCGCCCTaGACCTCGTGGACATTGGAA +
Preference number: 4 (lower is better)
Translates to: LHSHLRTRCRWVRGQVPWLSTAP*TSWTLE
Trigger: TTCCAATGTCCACGAGGTGCAGGGCGCTGTGCTCAG...CCAAGGCACCTGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS-3UTR GCA 90 bp GGCCTCAGCGGCCTGTATGTTCCCCTCCTCCAGGTACCTCTGGTCTGGCCGGAGCGACCGTTTCAGCTCTaGTGTCAGCTCATTCAGCTC +
Preference number: 4 (lower is better)
Translates to: GLSGLYVPLLQVPLVWPERPFQL*CQLIQL
Trigger: GAGCTGAATGAGCTGACAGCAGAGCTGAAACGGTCG...CTCCGGCCAGACCAGAGGTACCTGGAGGAGGGGAACATACAGGCCGCTGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578461.1
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp TCTGGTCTGGCCGGAGTCTCGTGTCGGTGGAAGGCAGCGACCGTTTCAGCTCTGTTGCGCCTGTCTCGCTaGAGCTGCTCGATCCTTCTC +
Preference number: 4 (lower is better)
Translates to: SGLAGVSCRWKAATVSALLRLSR*SCSILL
Trigger: GAGAAGGATCGAGCAGCTGCAGCGAGACAGGCGCAA...CAGAGCTGAAACGGTCGCTGCCTTCCACCGACACGAGACTCCGGCCAGACCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578461.1
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp TGCTGGTTGTCTGGGGCAAGGAGACTGGGGAAGCACAGATTCTGCTTCTCACCCAGGGAGGGCCAGGGCTaGCCCTTTGGTCTCAAGGGC +
Preference number: 4 (lower is better)
Translates to: CWLSGARRLGKHRFCFSPREGQG*PFGLKG
Trigger: GCCCTTGAGACCAAAGGGGCAGCCCTGGCCCTCCCT...GGGTGAGAAGCAGAATCTGTGCTTCCCCAGTCTCCTTGCCCCAGACAACCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp AGTCTCGTGTCGGTGGAAGGCAGCGACCGTTTCAGCTCTGCTGTCAGCTCATTCAGGGAGGGCCAGGGCTaGCCCTTTGGTCTCAAGGGC +
Preference number: 4 (lower is better)
Translates to: SLVSVEGSDRFSSAVSSFREGQG*PFGLKG
Trigger: GCCCTTGAGACCAAAGGGGCAGCCCTGGCCCTCCCT...GAATGAGCTGACAGCAGAGCTGAAACGGTCGCTGCCTTCCACCGACACGAGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp TTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGACAGGTGCCTTGGAGGCTTCCCTGGGAGTaGTCAGAGGTGAAGCAAGGG +
Preference number: 4 (lower is better)
Translates to: LHSHLRTRCRWVRGQVPWRLPWE*SEVKQG
Trigger: CCCTTGCTTCACCTCTGAGCACTCCCAGGGAAGCCT...CCAAGGCACCTGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579728.5
CDS-3UTR GCA 90 bp ACTGATGAAGCGGAAGCCTCGGTCAGGCCGCTCACACTCGTAGGTCTCCCCCAGCCCCAACATACCCTCTaGTCACCTGCCAAGCCTCTC +
Preference number: 4 (lower is better)
Translates to: TDEAEASVRPLTLVGLPQPQHTL*SPAKPL
Trigger: GAGAGGCTTGGCAGGTGAGCAGAGGGTATGTTGGGG...CTGGGGGAGACCTACGAGTGTGAGCGGCCTGACCGAGGCTTCCGCTTCATCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579728.5
CDS-3UTR GCA 90 bp TTGCGCCTGTCTCGCTGCAGCTGCTCGATCCTTCTCTTCTGGGCCTCAGCGGCCCGGTACAGAGCTTCTTaGTCCTCAGGGTTGAGGGAG +
Preference number: 4 (lower is better)
Translates to: LRLSRCSCSILLFWASAARYRAS*SSGLRE
Trigger: CTCCCTCAACCCTGAGGAGCAAGAAGCTCTGTACCG...GGCCGCTGAGGCCCAGAAGAGAAGGATCGAGCAGCTGCAGCGAGACAGGCGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613735.4
CDS-3UTR CCA 90 bp AGGGGAGGGAGAACAGATCACCTCCTCTCCTTCACTCACTGCAACCTCACCGCTGACGCCAGTACTCCTTaGCCCTTGCGCCGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: RGGRTDHLLSFTHCNLTADASTP*PLRRSA
Trigger: GGCAGAGCGGCGCAAGGGCCAAGGAGTACTGGCGTC...AGCGGTGAGGTTGCAGTGAGTGAAGGAGAGGAGGTGATCTGTTCTCCCTCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007414.8
ENST00000613735.4
CDS-3UTR CCA 90 bp GGGGAGGGAGAACAGATCACCTCCTCTCCTTCACTCACTGCAACCTCACCGCTGGGTCCCCAGGGTCCATaGACGCCAGTACTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: GEGEQITSSPSLTATSPLGPQGP*TPVLLG
Trigger: GCCAAGGAGTACTGGCGTCCATGGACCCTGGGGACC...CAGCGGTGAGGTTGCAGTGAGTGAAGGAGAGGAGGTGATCTGTTCTCCCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000007414.8
ENST00000613735.4
CDS-3UTR CCA 90 bp GGAGCCCTGCTTGCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCTAACAGCCGGACATCGATaGAGCCATGGAGCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: GALLACKQGTGAHAYTLLTAGHR*SHGASP
Trigger: AGGGGAAGCTCCATGGCTCCATCGATGTCCGGCTGT...TAGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGCAAGCAGGGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp TTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGACAGGTGCCTTGGACAGCCGGACATCGATaGAGCCATGGAGCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: LHSHLRTRCRWVRGQVPWTAGHR*SHGASP
Trigger: AGGGGAAGCTCCATGGCTCCATCGATGTCCGGCTGT...CCAAGGCACCTGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp GGTACCTCTGGTCTGGCCGGAGTCTCGTGTCGGTGGAAGGCAGCGACCGTTTCAGGCAGTAGCTGCTGTTaGAAGCTGGGCACCAGGAAC +
Preference number: 4 (lower is better)
Translates to: GTSGLAGVSCRWKAATVSGSSCC*KLGTRN
Trigger: GTTCCTGGTGCCCAGCTTCCAACAGCAGCTACTGCC...TGAAACGGTCGCTGCCTTCCACCGACACGAGACTCCGGCCAGACCAGAGGTACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp CAGACTGTGAGAAAGAGCAGCGATGTGGTGGACCCCCAGCAGGGGGAAGGCGGGTTGGGAACAGAGCCATaGAGACGACCAACCCGTCCA +
Preference number: 4 (lower is better)
Translates to: QTVRKSSDVVDPQQGEGGLGTEP*RRPTRP
Trigger: TGGACGGGTTGGTCGTCTCCATGGCTCTGTTCCCAA...CCCGCCTTCCCCCTGCTGGGGGTCCACCACATCGCTGCTCTTTCTCACAGTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp GGGAGCCCTGCTTGCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCTTGCATGTCCCTCAGTTaGTCCCGTTCCATGGTGAGG +
Preference number: 4 (lower is better)
Translates to: GSPACLQAGHRRTRIHSPCMSLS*SRSMVR
Trigger: CCTCACCATGGAACGGGACCAACTGAGGGACATGCA...AGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGCAAGCAGGGCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp TACACTCTCCTACATGAACTTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCTGGTCTGCGATAGCTaGGGGGTGAGCTCGCGCCCC +
Preference number: 4 (lower is better)
Translates to: YTLLHELTLTPAHSLPVGLVCDS*GVSSRP
Trigger: GGGGCGCGAGCTCACCCCCCAGCTATCGCAGACCAG...ACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAGTTCATGTAGGAGAGTGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS-3UTR CCA 90 bp AGGGAGCCCTGCTTGCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCCATTCTCAGAAGAGCTaGCGGAGAGGAGAACCTCGC +
Preference number: 4 (lower is better)
Translates to: REPCLPASRAQAHTHTLSHSQKS*RRGEPR
Trigger: GCGAGGTTCTCCTCTCCGCCAGCTCTTCTGAGAATG...GGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGCAAGCAGGGCTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS-3UTR CCA 90 bp CCCATAGCCTGGCTCGGCCCGCAGCCTCCAGTAGGTATTGTTGGTCACCCACCAGCGCCCTGCACCTCGTaGACATTGGAACTCCAGTAC +
Preference number: 4 (lower is better)
Translates to: PIAWLGPQPPVGIVGHPPAPCTS*TLELQY
Trigger: GTACTGGAGTTCCAATGTCCACGAGGTGCAGGGCGC...TGGTGGGTGACCAACAATACCTACTGGAGGCTGCGGGCCGAGCCAGGCTATGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579728.5
CDS-3UTR CCA 90 bp GGAACTCCAGTACTTGGCCTTGCAGAAGGTGATCTTGCAGTGGCAGGAGCTGTCACTGGCCACCTGGCGTaGGTCCCCGGTACAGCCCCT +
Preference number: 4 (lower is better)
Translates to: GTPVLGLAEGDLAVAGAVTGHLA*VPGTAP
Trigger: AGGGGCTGTACCGGGGACCCACGCCAGGTGGCCAGT...GACAGCTCCTGCCACTGCAAGATCACCTTCTGCAAGGCCAAGTACTGGAGTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579728.5
CDS-3UTR CCA 90 bp AGCCGGCTCGGTGGTATGTGGAGGAGTAGGCCGAGACAGCAAAGGCTGCGATGTCAGGTACCTCTGGTCTaGCCGGAGTCTCGTGTCGGT +
Preference number: 4 (lower is better)
Translates to: SRLGGMWRSRPRQQRLRCQVPLV*PESRVG
Trigger: ACCGACACGAGACTCCGGCCAGACCAGAGGTACCTG...ACATCGCAGCCTTTGCTGTCTCGGCCTACTCCTCCACATACCACCGAGCCGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579728.5
CDS-3UTR CCA 90 bp AACTTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGACAGGTGCCTTCCTCCAGGTACCTCTaGTCTGGCCGGAGTCTCGTG +
Preference number: 4 (lower is better)
Translates to: NLHSHLRTRCRWVRGQVPSSRYL*SGRSLV
Trigger: CACGAGACTCCGGCCAGACCAGAGGTACCTGGAGGA...AGGCACCTGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp GGGGAGGGAGAACAGATCACCTCCTCTCCTTCACTCACTGCAACCTCACCGCTGCATGTTCCCATAGCCTaGCTCGGCCCGCAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: GEGEQITSSPSLTATSPLHVPIA*LGPQPP
Trigger: TGGAGGCTGCGGGCCGAGCCAGGCTATGGGAACATG...CAGCGGTGAGGTTGCAGTGAGTGAAGGAGAGGAGGTGATCTGTTCTCCCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp CAAAGGCTGCGATGTACACCATGCGCTCGCAGGGGTCGGCGATGCGGCTGGCCTTACATGCTGGTTGTCTaGGGCAAGGAGACTGGGGAA +
Preference number: 4 (lower is better)
Translates to: QRLRCTPCARRGRRCGWPYMLVV*GKETGE
Trigger: TTCCCCAGTCTCCTTGCCCCAGACAACCAGCATGTA...AGGCCAGCCGCATCGCCGACCCCTGCGAGCGCATGGTGTACATCGCAGCCTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579728.5
CDS-3UTR CCA 90 bp AACTTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGACAGGTGCCTCTAACCAAAGGGAGCTaGAGAAGGCCCTGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: NLHSHLRTRCRWVRGQVPLTKGS*RRPCRA
Trigger: GGCCCTGCAGGGCCTTCTCCAGCTCCCTTTGGTTAG...AGGCACCTGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp GGAGCCCTGCTTGCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCTACCAGGACAGGAGGGATaGCCAGGGACTAACCAAAGG +
Preference number: 4 (lower is better)
Translates to: GALLACKQGTGAHAYTLLPGQEG*PGTNQR
Trigger: CCTTTGGTTAGTCCCTGGCCATCCCTCCTGTCCTGG...TAGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGCAAGCAGGGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp TCCCATAGCCTGGCTCGGCCCGCAGCCTCCAGTAGGTATTGTTGGTCACCCACCGCAGTGCCCAGGGCCTaGCAAGAATCTGCCCAACTA +
Preference number: 4 (lower is better)
Translates to: SHSLARPAASSRYCWSPTAVPRA*QESAQL
Trigger: TAGTTGGGCAGATTCTTGCCAGGCCCTGGGCACTGC...GGTGGGTGACCAACAATACCTACTGGAGGCTGCGGGCCGAGCCAGGCTATGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579728.5
CDS-3UTR TCA 90 bp GCCCTGCTTGCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCTACATCTCTTCTTGAGCAGGTaGCCTTCCTGCCTCTCAGGC +
Preference number: 4 (lower is better)
Translates to: ALLACKQGTGAHAYTLLHLFLSR*PSCLSG
Trigger: GCCTGAGAGGCAGGAAGGTCACCTGCTCAAGAAGAG...ATGTAGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGCAAGCAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR TCA 90 bp GGGGAGGGAGAACAGATCACCTCCTCTCCTTCACTCACTGCAACCTCACCGCTGCCAGGAACCTTCCGGTaGGCAGTACTGGGCAGTGAG +
Preference number: 4 (lower is better)
Translates to: GEGEQITSSPSLTATSPLPGTFR*AVLGSE
Trigger: CTCACTGCCCAGTACTGCTCACCGGAAGGTTCCTGG...CAGCGGTGAGGTTGCAGTGAGTGAAGGAGAGGAGGTGATCTGTTCTCCCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR TCA 90 bp TACATGCTGGTTGTCTGGGGCAAGGAGACTGGGGAAGCACAGATTCTGCTTCTCCCCCCAGGACAGGGTTaGAGGGCTTGCAGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: YMLVVWGKETGEAQILLLPPGQG*RACSRL
Trigger: GAGCCGGCTGCAAGCCCTTCAACCCTGTCCTGGGGG...GAGAAGCAGAATCTGTGCTTCCCCAGTCTCCTTGCCCCAGACAACCAGCATGTA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000007414.8
ENST00000579728.5
CDS-3UTR TCA 90 bp TTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGACAGGTGCCTTGGCCTGTGTGTTTCGGATaGGCACCTCCCCATAGTGCT +
Preference number: 4 (lower is better)
Translates to: LHSHLRTRCRWVRGQVPWPVCFG*APPHSA
Trigger: AGCACTATGGGGAGGTGCTCATCCGAAACACACAGG...CCAAGGCACCTGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS-3UTR TCA 90 bp GCCCTGCTTGCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCTACATTGGCCTTGCAGAAGGTaGTCTTGCAGTGGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: ALLACKQGTGAHAYTLLHWPCRR*SCSGRS
Trigger: GCTCCTGCCACTGCAAGATCACCTTCTGCAAGGCCA...ATGTAGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGCAAGCAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS-3UTR TCA 90 bp ACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGACAGGTGCCTTGGGCGTCCTAGGAAGGCACTaGAATAGGGAACAGATCCTG +
Preference number: 4 (lower is better)
Translates to: TLTPAHSLPVGQRTGALGVLGRH*NREQIL
Trigger: CAGGATCTGTTCCCTATTTCAGTGCCTTCCTAGGAC...GCCCAAGGCACCTGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR TCA 90 bp AGGGGAGGGAGAACAGATCACCTCCTCTCCTTCACTCACTGCAACCTCACCGCTCGGGAGGGAACCGCTTaGGGATCAGGGACGAAGGAG +
Preference number: 4 (lower is better)
Translates to: RGGRTDHLLSFTHCNLTAREGTA*GSGTKE
Trigger: CTCCTTCGTCCCTGATCCTCAAGCGGTTCCCTCCCG...AGCGGTGAGGTTGCAGTGAGTGAAGGAGAGGAGGTGATCTGTTCTCCCTCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR TCA 90 bp ATGGTGAAGCGGGAAGGGTCTTACATGCTGGTTGTCTGGGGCAAGGAGACTGGGCGGGAGGGAACCGCTTaGGGATCAGGGACGAAGGAG +
Preference number: 4 (lower is better)
Translates to: MVKREGSYMLVVWGKETGREGTA*GSGTKE
Trigger: CTCCTTCGTCCCTGATCCTCAAGCGGTTCCCTCCCG...CCCAGTCTCCTTGCCCCAGACAACCAGCATGTAAGACCCTTCCCGCTTCACCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR TCA 90 bp GCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCTACATGAACTTACAGAAGGCGGGGCTACATaGGGGAGCCCTGCTTGCCTG +
Preference number: 4 (lower is better)
Translates to: ACKQGTGAHAYTLLHELTEGGAT*GSPACL
Trigger: CAGGCAAGCAGGGCTCCCTCATGTAGCCCCGCCTTC...TGTAAGTTCATGTAGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR TCA 90 bp TCCTCCAGGTACCTCTGGTCTGGCCGGAGTCTCGTGTCGGTGGAAGGCAGCGACATCAGAGGCAGACTGTaGGAAAGAGCAGCGATGTGG +
Preference number: 4 (lower is better)
Translates to: SSRYLWSGRSLVSVEGSDIRGRL*ERAAMW
Trigger: CCACATCGCTGCTCTTTCTCACAGTCTGCCTCTGAT...GTCGCTGCCTTCCACCGACACGAGACTCCGGCCAGACCAGAGGTACCTGGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp AGGGGAGGGAGAACAGATCACCTCCTCTCCTTCACTCACTGCAACCTCACCGCTGGAGAGGCCACTCCCTaGTGGGGATGTAGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: RGGRTDHLLSFTHCNLTAGEATP*WGCRAG
Trigger: CCCTGCTCTACATCCCCAGCAGGGAGTGGCCTCTCC...AGCGGTGAGGTTGCAGTGAGTGAAGGAGAGGAGGTGATCTGTTCTCCCTCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp AACTTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGACAGGTGCCTTGGCAAAGCTCTGGGTaGACCACATGCGGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: NLHSHLRTRCRWVRGQVPWQSSG*TTCGLS
Trigger: GGACAAGCCGCATGTGGTGCACCCAGAGCTTTGCCA...AGGCACCTGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp AACTTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGACAGGTGCCTCAGCAAGGGACAGGATaGTGGTCTGCGATAGCTGGG +
Preference number: 4 (lower is better)
Translates to: NLHSHLRTRCRWVRGQVPQQGTG*WSAIAG
Trigger: CCCAGCTATCGCAGACCAGCATCCTGTCCCTTGCTG...AGGCACCTGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS-3UTR GCA 90 bp GAGGCAGACTGTGAGAAAGAGCAGCGATGTGGTGGACCCCCAGCAGGGGGAAGGCGAGACAGCAAAGGCTaGGATGTACACCATGCGCTC +
Preference number: 4 (lower is better)
Translates to: EADCEKEQRCGGPPAGGRRDSKG*DVHHAL
Trigger: GAGCGCATGGTGTACATCGCAGCCTTTGCTGTCTCG...CCTTCCCCCTGCTGGGGGTCCACCACATCGCTGCTCTTTCTCACAGTCTGCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS-3UTR GCA 90 bp GAGCCCTGCTTGCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCTACCTGTCTCGCTGCAGCTaGTCGATCCTTCTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: EPCLPASRAQAHTHTLSYLSRCS*SILLFW
Trigger: CCAGAAGAGAAGGATCGAGCAGCTGCAGCGAGACAG...GTAGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGCAAGCAGGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp TGGCCGGAGTCTCGTGTCGGTGGAAGGCAGCGACCGTTTCAGCTCTGCTGTCAGCTGTCTCGCTGCAGCTaGTCGATCCTTCTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: WPESRVGGRQRPFQLCCQLSRCS*SILLFW
Trigger: CCAGAAGAGAAGGATCGAGCAGCTGCAGCGAGACAG...CTGACAGCAGAGCTGAAACGGTCGCTGCCTTCCACCGACACGAGACTCCGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578461.1
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp TTTGCGCCTGTCTCGCTGCAGCTGCTCGATCCTTCTCTTCTGGGCCTCAGCGGCCTGTCTCGCTGCAGCTaGTCGATCCTTCTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: FAPVSLQLLDPSLLGLSGLSRCS*SILLFW
Trigger: CCAGAAGAGAAGGATCGAGCAGCTGCAGCGAGACAG...GCCGCTGAGGCCCAGAAGAGAAGGATCGAGCAGCTGCAGCGAGACAGGCGCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578461.1
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp GCCCTGCTTGCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCTACATTTGCGCCTGTCTCGCTaGAGCTGCTCGATCCTTCTC +
Preference number: 4 (lower is better)
Translates to: ALLACKQGTGAHAYTLLHLRLSR*SCSILL
Trigger: GAGAAGGATCGAGCAGCTGCAGCGAGACAGGCGCAA...ATGTAGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGCAAGCAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp TGGCTCGGCCCGCAGCCTCCAGTAGGTATTGTTGGTCACCCACCACTCTTTCCCTTGCGCCTGTCTCGCTaGAGCTGCTCGATCCTTCTC +
Preference number: 4 (lower is better)
Translates to: WLGPQPPVGIVGHPPLFPLRLSR*SCSILL
Trigger: GAGAAGGATCGAGCAGCTGCAGCGAGACAGGCGCAA...GGGAAAGAGTGGTGGGTGACCAACAATACCTACTGGAGGCTGCGGGCCGAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578461.1
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp ACTCTCCTACATGAACTTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGCCGCTGCTATCCGTCTaGCGCCTGAAGAAGCGAGCC +
Preference number: 4 (lower is better)
Translates to: TLLHELTLTPAHSLPVGQPLLSV*RLKKRA
Trigger: GGCTCGCTTCTTCAGGCGGCAGACGGATAGCAGCGG...CTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAGTTCATGTAGGAGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp GTTCCCATAGCCTGGCTCGGCCCGCAGCCTCCAGTAGGTATTGTTGGTCACCCACTCTCCTTCACTCACTaGAACCTCACCGCTGGGGAC +
Preference number: 4 (lower is better)
Translates to: VPIAWLGPQPPVGIVGHPLSFTH*NLTAGD
Trigger: GTCCCCAGCGGTGAGGTTGCAGTGAGTGAAGGAGAG...TGGGTGACCAACAATACCTACTGGAGGCTGCGGGCCGAGCCAGGCTATGGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp CATGCTGGTTGTCTGGGGCAAGGAGACTGGGGAAGCACAGATTCTGCTTCTCACGGGTCAGAGGACAGGTaGCTTGGGCTGCTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: HAGCLGQGDWGSTDSASHGSEDR*LGLLPS
Trigger: GGAGGGGAGCAGCCCAAGGCACCTGTCCTCTGACCC...GTGAGAAGCAGAATCTGTGCTTCCCCAGTCTCCTTGCCCCAGACAACCAGCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp TCAGAGGCAGACTGTGAGAAAGAGCAGCGATGTGGTGGACCCCCAGCAGGGGGAAGCAGTGGCAGCAGCTaGTGCAGGAACCAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: SEADCEKEQRCGGPPAGGSSGSS*CRNQEG
Trigger: TCCTTCCTGGTTCCTGCAGCAGCTGCTGCCACTGCT...TCCCCCTGCTGGGGGTCCACCACATCGCTGCTCTTTCTCACAGTCTGCCTCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000392507.7
CDS-3UTR GCA 90 bp AGGAGTAGGCCGAGACAGCAAAGGCTGCGATGTACACCATGCGCTCGCAGGGGTCAGCAGACGGGCAGGTaGCCAGGGAAAACCACAAGA +
Preference number: 4 (lower is better)
Translates to: RSRPRQQRLRCTPCARRGQQTGR*PGKTTR
Trigger: TCTTGTGGTTTTCCCTGGGCACCTGCCCGTCTGCTG...ACCCCTGCGAGCGCATGGTGTACATCGCAGCCTTTGCTGTCTCGGCCTACTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579728.5
CDS-3UTR CCA 90 bp GCCCTGCTTGCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCTACATGGCGGGTCCCTCTCTTaGAAGTCCATGGAGAAGGGA +
Preference number: 4 (lower is better)
Translates to: ALLACKQGTGAHAYTLLHGGSLS*KSMEKG
Trigger: TCCCTTCTCCATGGACTTCCAAGAGAGGGACCCGCC...ATGTAGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGCAAGCAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp TGGCTCGGCCCGCAGCCTCCAGTAGGTATTGTTGGTCACCCACCACTCTTTCCCGGCAGTAGCTGCTGTTaGAAGCTGGGCACCAGGAAC +
Preference number: 4 (lower is better)
Translates to: WLGPQPPVGIVGHPPLFPGSSCC*KLGTRN
Trigger: GTTCCTGGTGCCCAGCTTCCAACAGCAGCTACTGCC...GGGAAAGAGTGGTGGGTGACCAACAATACCTACTGGAGGCTGCGGGCCGAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp GAGCCCTGCTTGCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCTACGTTGTCACTGAGGCCTaGTGTGTGGGGATAACAGGG +
Preference number: 4 (lower is better)
Translates to: EPCLPASRAQAHTHTLSYVVTEA*CVGITG
Trigger: CCCTGTTATCCCCACACACCAGGCCTCAGTGACAAC...GTAGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGCAAGCAGGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp GGCATTGAGTTGGGTTTCCAGATGCACTGGCCACCTGGCGTGGGTCCCCGGTACTCCTTGGCAAAGCTCTaGGTGCACCACATGCGGCTT +
Preference number: 4 (lower is better)
Translates to: GIELGFQMHWPPGVGPRYSLAKL*VHHMRL
Trigger: AAGCCGCATGTGGTGCACCCAGAGCTTTGCCAAGGA...GTACCGGGGACCCACGCCAGGTGGCCAGTGCATCTGGAAACCCAACTCAATGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp CCACCACTCTTTCCCGCTGCTATCCGTCTGCCGCCTGAAGAAGCGAGCCTGGTGTTGGGAACAGAGCCATaGAGACGACCAACCCGTCCA +
Preference number: 4 (lower is better)
Translates to: PPLFPAAIRLPPEEASLVLGTEP*RRPTRP
Trigger: TGGACGGGTTGGTCGTCTCCATGGCTCTGTTCCCAA...CACCAGGCTCGCTTCTTCAGGCGGCAGACGGATAGCAGCGGGAAAGAGTGGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp CTCAGCGGCCTGTATGTTCCCCTCCTCCAGGTACCTCTGGTCTGGCCGGAGTCTGGTAGCGAGACAGGTTaGGAACAGAGCCATGGAGAC +
Preference number: 4 (lower is better)
Translates to: LSGLYVPLLQVPLVWPESGSETG*EQSHGD
Trigger: GTCTCCATGGCTCTGTTCCCAACCTGTCTCGCTACC...AGACTCCGGCCAGACCAGAGGTACCTGGAGGAGGGGAACATACAGGCCGCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp GCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCTACATGAACTTACAGGTGGGCATAGTCTGTaGGTGGCAGCCCACGGGTGC +
Preference number: 4 (lower is better)
Translates to: ACKQGTGAHAYTLLHELTGGHSL*VAAHGC
Trigger: GCACCCGTGGGCTGCCACCCACAGACTATGCCCACC...TGTAAGTTCATGTAGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp CGGAATGGTGAAGCGGGAAGGGTCTTACATGCTGGTTGTCTGGGGCAAGGAGACGAGCTGTGCACCTTCTaGGCCAGGGCCCAGAAGCTG +
Preference number: 4 (lower is better)
Translates to: RNGEAGRVLHAGCLGQGDELCTF*ARAQKL
Trigger: CAGCTTCTGGGCCCTGGCCCAGAAGGTGCACAGCTC...GTCTCCTTGCCCCAGACAACCAGCATGTAAGACCCTTCCCGCTTCACCATTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp TTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGACAGGTGCCTTGGTGCATGTCCCTCAGTTaGTCCCGTTCCATGGTGAGG +
Preference number: 4 (lower is better)
Translates to: LHSHLRTRCRWVRGQVPWCMSLS*SRSMVR
Trigger: CCTCACCATGGAACGGGACCAACTGAGGGACATGCA...CCAAGGCACCTGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp TCTGGTCTGGCCGGAGTCTCGTGTCGGTGGAAGGCAGCGACCGTTTCAGCTCTGTGCATGTCCCTCAGTTaGTCCCGTTCCATGGTGAGG +
Preference number: 4 (lower is better)
Translates to: SGLAGVSCRWKAATVSALCMSLS*SRSMVR
Trigger: CCTCACCATGGAACGGGACCAACTGAGGGACATGCA...CAGAGCTGAAACGGTCGCTGCCTTCCACCGACACGAGACTCCGGCCAGACCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp TTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGACAGGTGCCTTGGGACAACTCTGAGCCCTaGTGCATGTCCCTCAGTTGG +
Preference number: 4 (lower is better)
Translates to: LHSHLRTRCRWVRGQVPWDNSEP*CMSLSW
Trigger: CCAACTGAGGGACATGCACCAGGGCTCAGAGTTGTC...CCAAGGCACCTGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp TCTGGTCTGGCCGGAGTCTCGTGTCGGTGGAAGGCAGCGACCGTTTCAGCTCTGGACAACTCTGAGCCCTaGTGCATGTCCCTCAGTTGG +
Preference number: 4 (lower is better)
Translates to: SGLAGVSCRWKAATVSALDNSEP*CMSLSW
Trigger: CCAACTGAGGGACATGCACCAGGGCTCAGAGTTGTC...CAGAGCTGAAACGGTCGCTGCCTTCCACCGACACGAGACTCCGGCCAGACCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp CCCAAAGGGGACAGGAATCGGAATGGTGAAGCGGGAAGGGTCTTACATGCTGGTGAGTGGAGGCGCCTCTaGCCAGTGGAGGCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: PKGDRNRNGEAGRVLHAGEWRRL*PVEASE
Trigger: CTCTGAGGCCTCCACTGGCCAGAGGCGCCTCCACTC...ACCAGCATGTAAGACCCTTCCCGCTTCACCATTCCGATTCCTGTCCCCTTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp AGGGGAGGGAGAACAGATCACCTCCTCTCCTTCACTCACTGCAACCTCACCGCTGAGGTGGACAGTGAGTaGAGGCGCCTCTGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: RGGRTDHLLSFTHCNLTAEVDSE*RRLWPV
Trigger: CACTGGCCAGAGGCGCCTCCACTCACTGTCCACCTC...AGCGGTGAGGTTGCAGTGAGTGAAGGAGAGGAGGTGATCTGTTCTCCCTCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp GAGGGAGCCCTGCTTGCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCTCGAAGAACTCCGTGTaGGAATCAGCAAGGGACAGG +
Preference number: 4 (lower is better)
Translates to: EGALLACKQGTGAHAYTLSKNSV*ESARDR
Trigger: CCTGTCCCTTGCTGATTCCCACACGGAGTTCTTCGA...GAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGCAAGCAGGGCTCCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS-3UTR CCA 90 bp AGGGAGCCCTGCTTGCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCTCGAAGAACTCCGTGTaGGAATCAGCAAGGGACAGG +
Preference number: 4 (lower is better)
Translates to: REPCLPASRAQAHTHTLSSKNSV*ESARDR
Trigger: CCTGTCCCTTGCTGATTCCCACACGGAGTTCTTCGA...GGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGCAAGCAGGGCTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS-3UTR CCA 90 bp GAGCCCTGCTTGCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCTACCATTCTCAGAAGAGCTaGCGGAGAGGAGAACCTCGC +
Preference number: 4 (lower is better)
Translates to: EPCLPASRAQAHTHTLSYHSQKS*RRGEPR
Trigger: GCGAGGTTCTCCTCTCCGCCAGCTCTTCTGAGAATG...GTAGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGCAAGCAGGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS-3UTR CCA 90 bp CAGACTGTGAGAAAGAGCAGCGATGTGGTGGACCCCCAGCAGGGGGAAGGCGGGAAGGTGATCTTGCAGTaGCAGGAGCTGTCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: QTVRKSSDVVDPQQGEGGKVILQ*QELSCV
Trigger: CACACAGGACAGCTCCTGCCACTGCAAGATCACCTT...CCCGCCTTCCCCCTGCTGGGGGTCCACCACATCGCTGCTCTTTCTCACAGTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS-3UTR CCA 90 bp CCCAAGTACCCCAAAGGGGACAGGAATCGGAATGGTGAAGCGGGAAGGGTCTTAGATGCACTGGCCACCTaGCGTGGGTCCCCGGTACAG +
Preference number: 4 (lower is better)
Translates to: PKYPKGDRNRNGEAGRVLDALAT*RGSPVQ
Trigger: CTGTACCGGGGACCCACGCCAGGTGGCCAGTGCATC...TAAGACCCTTCCCGCTTCACCATTCCGATTCCTGTCCCCTTTGGGGTACTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp CCAGTAGGTATTGTTGGTCACCCACCACTCTTTCCCGCTGCTATCCGTCTGCCGGGTTTCCAGATGCACTaGCCACCTGGCGTGGGTCCC +
Preference number: 4 (lower is better)
Translates to: PVGIVGHPPLFPAAIRLPGFQMH*PPGVGP
Trigger: GGGACCCACGCCAGGTGGCCAGTGCATCTGGAAACC...CGGCAGACGGATAGCAGCGGGAAAGAGTGGTGGGTGACCAACAATACCTACTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578461.1
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp AGGGAGCCCTGCTTGCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCAGCTCCAAGGCAAACTaGGTGAAGCCGAAGTTTCGC +
Preference number: 4 (lower is better)
Translates to: REPCLPASRAQAHTHTLSSSKAN*VKPKFR
Trigger: GCGAAACTTCGGCTTCACCCAGTTTGCCTTGGAGCT...GGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGCAAGCAGGGCTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp GCACAGAAAGCCTGGGGAGCGTCAAGGAGTCCCCTGTGTCCTAGGAAGGCACTGGGAGTCTCGTGTCGGTaGAAGGCAGCGACCGTTTCA +
Preference number: 4 (lower is better)
Translates to: AQKAWGASRSPLCPRKALGVSCR*KAATVS
Trigger: TGAAACGGTCGCTGCCTTCCACCGACACGAGACTCC...CAGTGCCTTCCTAGGACACAGGGGACTCCTTGACGCTCCCCAGGCTTTCTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp GGAGCCCTGCTTGCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCTAATAGGGAACAGATCCTaGGAGCCAGAGTCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: GALLACKQGTGAHAYTLLIGNRS*EPESPP
Trigger: TGGGGGAGACTCTGGCTCCCAGGATCTGTTCCCTAT...TAGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGCAAGCAGGGCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp AGCGGGAAGGGTCTTACATGCTGGTTGTCTGGGGCAAGGAGACTGGGGAAGCACCTAACCAAAGGGAGCTaGAGAAGGCCCTGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: SGKGLTCWLSGARRLGKHLTKGS*RRPCRA
Trigger: GGCCCTGCAGGGCCTTCTCCAGCTCCCTTTGGTTAG...GTGCTTCCCCAGTCTCCTTGCCCCAGACAACCAGCATGTAAGACCCTTCCCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp GCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCTACATGAACTTACACGCACTCGCTGCCGGTaGGTCAGAGGACAGGTGCCT +
Preference number: 4 (lower is better)
Translates to: ACKQGTGAHAYTLLHELTRTRCR*VRGQVP
Trigger: AGGCACCTGTCCTCTGACCCACCGGCAGCGAGTGCG...TGTAAGTTCATGTAGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp CATGCTGGTTGTCTGGGGCAAGGAGACTGGGGAAGCACAGATTCTGCTTCTCACCGCACTCGCTGCCGGTaGGTCAGAGGACAGGTGCCT +
Preference number: 4 (lower is better)
Translates to: HAGCLGQGDWGSTDSASHRTRCR*VRGQVP
Trigger: AGGCACCTGTCCTCTGACCCACCGGCAGCGAGTGCG...GTGAGAAGCAGAATCTGTGCTTCCCCAGTCTCCTTGCCCCAGACAACCAGCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR TCA 90 bp ACAGGCGCACACGCATACACTCTCCTACATGAACTTACACTCACACCTGCGCACGATGTCACCTGCTCCTaGCGGGGTCCCCAGGGTCCA +
Preference number: 4 (lower is better)
Translates to: TGAHAYTLLHELTLTPAHDVTCS*RGPQGP
Trigger: TGGACCCTGGGGACCCCGTCAGGAGCAGGTGACATC...GTGCGCAGGTGTGAGTGTAAGTTCATGTAGGAGAGTGTATGCGTGTGCGCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000613735.4
CDS-3UTR TCA 90 bp CGCCTGAAGAAGCGAGCCTGGTGTACGATGTTGTTTTCCTCCATGACTTTGCGCGATGTCACCTGCTCCTaGCGGGGTCCCCAGGGTCCA +
Preference number: 4 (lower is better)
Translates to: RLKKRAWCTMLFSSMTLRDVTCS*RGPQGP
Trigger: TGGACCCTGGGGACCCCGTCAGGAGCAGGTGACATC...GCGCAAAGTCATGGAGGAAAACAACATCGTACACCAGGCTCGCTTCTTCAGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000613735.4
CDS-3UTR TCA 90 bp ACTCTCCTACATGAACTTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGCACTGCTGGGCTTTaGGGACTGAGCGCTCTCAGG +
Preference number: 4 (lower is better)
Translates to: TLLHELTLTPAHSLPVGQSTAGL*GLSALR
Trigger: CCTGAGAGCGCTCAGTCCTCAAAGCCCAGCAGTGCT...CTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAGTTCATGTAGGAGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR TCA 90 bp CTACATGAACTTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGACAAGCACTGCTGGGCTTTaGGGACTGAGCGCTCTCAGG +
Preference number: 4 (lower is better)
Translates to: LHELTLTPAHSLPVGQRTSTAGL*GLSALR
Trigger: CCTGAGAGCGCTCAGTCCTCAAAGCCCAGCAGTGCT...TGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAGTTCATGTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR TCA 90 bp CTACATGAACTTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGACAAGCTCAGAGGCCTGCTaGGCACTGCTGGGCTTTGAG +
Preference number: 4 (lower is better)
Translates to: LHELTLTPAHSLPVGQRTSSEAC*ALLGFE
Trigger: CTCAAAGCCCAGCAGTGCTCAGCAGGCCTCTGAGCT...TGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAGTTCATGTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR TCA 90 bp GAGGCAGACTGTGAGAAAGAGCAGCGATGTGGTGGACCCCCAGCAGGGGGAAGGCAGACAGGCTGGTGGTaGTTTCACTGGTACAGGACT +
Preference number: 4 (lower is better)
Translates to: EADCEKEQRCGGPPAGGRQTGWW*FHWYRT
Trigger: AGTCCTGTACCAGTGAAATCACCACCAGCCTGTCTG...CCTTCCCCCTGCTGGGGGTCCACCACATCGCTGCTCTTTCTCACAGTCTGCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS-3UTR TCA 90 bp GCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCTACATGAACTTACAAGCGCTCAGCTCCCCTaGGGTCCAGCATCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: ACKQGTGAHAYTLLHELTSAQLP*GPASPQ
Trigger: CTGAGGAGATGCTGGACCTCAGGGGAGCTGAGCGCT...TGTAAGTTCATGTAGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS-3UTR TCA 90 bp GTTCCCATAGCCTGGCTCGGCCCGCAGCCTCCAGTAGGTATTGTTGGTCACCCACCTGTGTGTTTCGGATaGGCACCTCCCCATAGTGCT +
Preference number: 4 (lower is better)
Translates to: VPIAWLGPQPPVGIVGHPPVCFG*APPHSA
Trigger: AGCACTATGGGGAGGTGCTCATCCGAAACACACAGG...TGGGTGACCAACAATACCTACTGGAGGCTGCGGGCCGAGCCAGGCTATGGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579728.5
CDS-3UTR TCA 90 bp GCTGCTATCCGTCTGCCGCCTGAAGAAGCGAGCCTGGTGTACGATGTTGTTTTCTGGAGGCAGGAGGAGTaGGGAACCAGAGCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: AAIRLPPEEASLVYDVVFWRQEE*GTRASC
Trigger: GCAGGAGGCTCTGGTTCCTCACTCCTCCTGCCTCCA...GAAAACAACATCGTACACCAGGCTCGCTTCTTCAGGCGGCAGACGGATAGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578461.1
ENST00000579728.5
ENST00000613735.4
CDS-3UTR TCA 90 bp TGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCTACATGAACTTACACTCGGGGATCCGCTGAGCTaGGACGGGAGGGAACCGCTT +
Preference number: 4 (lower is better)
Translates to: CKQGTGAHAYTLLHELTLGDPLS*DGREPL
Trigger: AAGCGGTTCCCTCCCGTCTCAGCTCAGCGGATCCCC...GAGTGTAAGTTCATGTAGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR TCA 90 bp GGAGCCCTGCTTGCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCTAATCAGAGGCAGACTGTaGGAAAGAGCAGCGATGTGG +
Preference number: 4 (lower is better)
Translates to: GALLACKQGTGAHAYTLLIRGRL*ERAAMW
Trigger: CCACATCGCTGCTCTTTCTCACAGTCTGCCTCTGAT...TAGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGCAAGCAGGGCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR TCA 90 bp CCCATAGCCTGGCTCGGCCCGCAGCCTCCAGTAGGTATTGTTGGTCACCCACCAGGTGAAGCAAGGGAGTaGCAGAAGAGGCTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: PIAWLGPQPPVGIVGHPPGEARE*QKRLQE
Trigger: TTCTTGGAGCCTCTTCTGTCACTCCCTTGCTTCACC...TGGTGGGTGACCAACAATACCTACTGGAGGCTGCGGGCCGAGCCAGGCTATGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579728.5
CDS-3UTR GCA 90 bp ACTCTCCTACATGAACTTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGGTACTCCTTGGCCCTTaGGCCGCTCTGCCTCTGAGT +
Preference number: 4 (lower is better)
Translates to: TLLHELTLTPAHSLPVGQVLLGP*AALPLS
Trigger: ACTCAGAGGCAGAGCGGCGCAAGGGCCAAGGAGTAC...CTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAGTTCATGTAGGAGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000613735.4
CDS-3UTR GCA 90 bp GGGAGCCCTGCTTGCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCTACAAAGTATCTCTTGTaGCAGCCCTTCAGAGGCCAC +
Preference number: 4 (lower is better)
Translates to: GSPACLQAGHRRTRIHSPTKYLL*QPFRGH
Trigger: GTGGCCTCTGAAGGGCTGGCACAAGAGATACTTTGT...AGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGCAAGCAGGGCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp GAGGGAGCCCTGCTTGCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCACAAAGTATCTCTTGTaGCAGCCCTTCAGAGGCCAC +
Preference number: 4 (lower is better)
Translates to: EGALLACKQGTGAHAYTLTKYLL*QPFRGH
Trigger: GTGGCCTCTGAAGGGCTGGCACAAGAGATACTTTGT...GAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGCAAGCAGGGCTCCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp AGGGAGCCCTGCTTGCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCACAAAGTATCTCTTGTaGCAGCCCTTCAGAGGCCAC +
Preference number: 4 (lower is better)
Translates to: REPCLPASRAQAHTHTLSTKYLL*QPFRGH
Trigger: GTGGCCTCTGAAGGGCTGGCACAAGAGATACTTTGT...GGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGCAAGCAGGGCTCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp TGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCTACATGAACTTACACTCCGGTGGGCACGCAGCTaGGCCACCCAGCTCTGGAAT +
Preference number: 4 (lower is better)
Translates to: CKQGTGAHAYTLLHELTLRWARS*ATQLWN
Trigger: ATTCCAGAGCTGGGTGGCGCAGCTGCGTGCCCACCG...GAGTGTAAGTTCATGTAGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp TTGGTCACCCACCACTCTTTCCCGCTGCTATCCGTCTGCCGCCTGAAGAAGCGATCTGGGTGCACCACATaGGGCTTGTCCGTTTCCCCT +
Preference number: 4 (lower is better)
Translates to: LVTHHSFPLLSVCRLKKRSGCTT*GLSVSP
Trigger: AGGGGAAACGGACAAGCCGCATGTGGTGCACCCAGA...TCGCTTCTTCAGGCGGCAGACGGATAGCAGCGGGAAAGAGTGGTGGGTGACCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp ACAGGCGCACACGCATACACTCTCCTACATGAACTTACACTCACACCTGCGCACCTGCTGAGGGAGCTGTaGACCTTCTGGGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: TGAHAYTLLHELTLTPAHLLREL*TFWARA
Trigger: GGCCCTGGCCCAGAAGGTGCACAGCTCCCTCAGCAG...GTGCGCAGGTGTGAGTGTAAGTTCATGTAGGAGAGTGTATGCGTGTGCGCCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp CGCCTGAAGAAGCGAGCCTGGTGTACGATGTTGTTTTCCTCCATGACTTTGCGCCTGCTGAGGGAGCTGTaGACCTTCTGGGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: RLKKRAWCTMLFSSMTLRLLREL*TFWARA
Trigger: GGCCCTGGCCCAGAAGGTGCACAGCTCCCTCAGCAG...GCGCAAAGTCATGGAGGAAAACAACATCGTACACCAGGCTCGCTTCTTCAGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp AGGAGTAGGCCGAGACAGCAAAGGCTGCGATGTACACCATGCGCTCGCAGGGGTAACTCTGAGCCCTGGTaGATGTCCCTCAGTTGGTCC +
Preference number: 4 (lower is better)
Translates to: RSRPRQQRLRCTPCARRGNSEPW*MSLSWS
Trigger: GGACCAACTGAGGGACATGCACCAGGGCTCAGAGTT...ACCCCTGCGAGCGCATGGTGTACATCGCAGCCTTTGCTGTCTCGGCCTACTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579728.5
CDS-3UTR GCA 90 bp CATGCTGGTTGTCTGGGGCAAGGAGACTGGGGAAGCACAGATTCTGCTTCTCACCTGCGATGTACACCATaGGCTCGCAGGGGTCGGCGA +
Preference number: 4 (lower is better)
Translates to: HAGCLGQGDWGSTDSASHLRCTP*ARRGRR
Trigger: TCGCCGACCCCTGCGAGCGCATGGTGTACATCGCAG...GTGAGAAGCAGAATCTGTGCTTCCCCAGTCTCCTTGCCCCAGACAACCAGCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000007414.8
ENST00000579728.5
CDS-3UTR GCA 90 bp GCTGCTATCCGTCTGCCGCCTGAAGAAGCGAGCCTGGTGTACGATGTTGTTTTCCTGCGATGTACACCATaGGCTCGCAGGGGTCGGCGA +
Preference number: 4 (lower is better)
Translates to: AAIRLPPEEASLVYDVVFLRCTP*ARRGRR
Trigger: TCGCCGACCCCTGCGAGCGCATGGTGTACATCGCAG...GAAAACAACATCGTACACCAGGCTCGCTTCTTCAGGCGGCAGACGGATAGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579728.5
CDS-3UTR GCA 90 bp AGGAGTAGGCCGAGACAGCAAAGGCTGCGATGTACACCATGCGCTCGCAGGGGTCGAGACAGCAAAGGCTaGGATGTACACCATGCGCTC +
Preference number: 4 (lower is better)
Translates to: RSRPRQQRLRCTPCARRGRDSKG*DVHHAL
Trigger: GAGCGCATGGTGTACATCGCAGCCTTTGCTGTCTCG...ACCCCTGCGAGCGCATGGTGTACATCGCAGCCTTTGCTGTCTCGGCCTACTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579728.5
CDS-3UTR GCA 90 bp CTTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGACAGGTGCCTTGGAAGTTCTCAGACTCTaGATGGCAGGCCGAGATAGG +
Preference number: 4 (lower is better)
Translates to: LTLTPAHSLPVGQRTGALEVLRL*MAGRDR
Trigger: CCTATCTCGGCCTGCCATGCAGAGTCTGAGAACTTC...CAAGGCACCTGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS-3UTR GCA 90 bp GGCATTGAGTTGGGTTTCCAGATGCACTGGCCACCTGGCGTGGGTCCCCGGTACGAAGTTCTCAGACTCTaGATGGCAGGCCGAGATAGG +
Preference number: 4 (lower is better)
Translates to: GIELGFQMHWPPGVGPRYEVLRL*MAGRDR
Trigger: CCTATCTCGGCCTGCCATGCAGAGTCTGAGAACTTC...GTACCGGGGACCCACGCCAGGTGGCCAGTGCATCTGGAAACCCAACTCAATGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579728.5
CDS-3UTR GCA 90 bp ACTCTCCTACATGAACTTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGCGGTACAGCCCCTCGTaGCACTTCCCAAAGAGTCGG +
Preference number: 4 (lower is better)
Translates to: TLLHELTLTPAHSLPVGQRYSPS*HFPKSR
Trigger: CCGACTCTTTGGGAAGTGGCACGAGGGGCTGTACCG...CTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAGTTCATGTAGGAGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS-3UTR GCA 90 bp CTTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGACAGGTGCCTTGCGACCGTTTCAGCTCTaGTGTCAGCTCATTCAGCTC +
Preference number: 4 (lower is better)
Translates to: LTLTPAHSLPVGQRTGALRPFQL*CQLIQL
Trigger: GAGCTGAATGAGCTGACAGCAGAGCTGAAACGGTCG...CAAGGCACCTGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp CCCAAAGGGGACAGGAATCGGAATGGTGAAGCGGGAAGGGTCTTACATGCTGGTCCGCTGCTATCCGTCTaGCGCCTGAAGAAGCGAGCC +
Preference number: 4 (lower is better)
Translates to: PKGDRNRNGEAGRVLHAGPLLSV*RLKKRA
Trigger: GGCTCGCTTCTTCAGGCGGCAGACGGATAGCAGCGG...ACCAGCATGTAAGACCCTTCCCGCTTCACCATTCCGATTCCTGTCCCCTTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp GCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCTACATGAACTTACACCGCTGCTATCCGTCTaGCGCCTGAAGAAGCGAGCC +
Preference number: 4 (lower is better)
Translates to: ACKQGTGAHAYTLLHELTPLLSV*RLKKRA
Trigger: GGCTCGCTTCTTCAGGCGGCAGACGGATAGCAGCGG...TGTAAGTTCATGTAGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp CCTCCAGTAGGTATTGTTGGTCACCCACCACTCTTTCCCGCTGCTATCCGTCTGCCGCTGCTATCCGTCTaGCGCCTGAAGAAGCGAGCC +
Preference number: 4 (lower is better)
Translates to: PPVGIVGHPPLFPAAIRLPLLSV*RLKKRA
Trigger: GGCTCGCTTCTTCAGGCGGCAGACGGATAGCAGCGG...CAGACGGATAGCAGCGGGAAAGAGTGGTGGGTGACCAACAATACCTACTGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578461.1
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp TGGAATGTCATAGCAATTCGCCCTCATCAGAGGCAGACTGTGAGAAAGAGCAGCGGAACCAGAGCCTCCTaGCCCCGGGGCCAGGGCTAC +
Preference number: 4 (lower is better)
Translates to: WNVIAIRPHQRQTVRKSSGTRAS*PRGQGY
Trigger: GTAGCCCTGGCCCCGGGGGCAGGAGGCTCTGGTTCC...GCTGCTCTTTCTCACAGTCTGCCTCTGATGAGGGCGAATTGCTATGACATTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp GGTACCTCTGGTCTGGCCGGAGTCTCGTGTCGGTGGAAGGCAGCGACCGTTTCAGGGAAGCACAGATTCTaGTTCTCACCCCAAACGGTG +
Preference number: 4 (lower is better)
Translates to: GTSGLAGVSCRWKAATVSGKHRF*FSPQTV
Trigger: CACCGTTTGGGGTGAGAAGCAGAATCTGTGCTTCCC...TGAAACGGTCGCTGCCTTCCACCGACACGAGACTCCGGCCAGACCAGAGGTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp TCAGAGGCAGACTGTGAGAAAGAGCAGCGATGTGGTGGACCCCCAGCAGGGGGAGGGAAGGGTCTTACATaGTGGTTGTCTGGGGCAAGG +
Preference number: 4 (lower is better)
Translates to: SEADCEKEQRCGGPPAGGGKGLT*WLSGAR
Trigger: CCTTGCCCCAGACAACCAGCATGTAAGACCCTTCCC...TCCCCCTGCTGGGGGTCCACCACATCGCTGCTCTTTCTCACAGTCTGCCTCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp CCCAAGTACCCCAAAGGGGACAGGAATCGGAATGGTGAAGCGGGAAGGGTCTTAAGCTGGAGAAGGCCCTaGAGGGCCAGGGAAGGGGAA +
Preference number: 4 (lower is better)
Translates to: PKYPKGDRNRNGEAGRVLSWRRP*RAREGE
Trigger: TTCCCCTTCCCTGGCCCTGCAGGGCCTTCTCCAGCT...TAAGACCCTTCCCGCTTCACCATTCCGATTCCTGTCCCCTTTGGGGTACTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp GCAGACTGTGAGAAAGAGCAGCGATGTGGTGGACCCCCAGCAGGGGGAAGGCGGGAAGGAGCTGGAAGCTaGAGGCATTTTGCAGTTAGG +
Preference number: 4 (lower is better)
Translates to: ADCEKEQRCGGPPAGGRREGAGS*RHFAVR
Trigger: CCTAACTGCAAAATGCCTGCAGCTTCCAGCTCCTTC...CCGCCTTCCCCCTGCTGGGGGTCCACCACATCGCTGCTCTTTCTCACAGTCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp ACAGGCGCACACGCATACACTCTCCTACATGAACTTACACTCACACCTGCGCACGACGCCAGTACTCCTTaGCCCTTGCGCCGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: TGAHAYTLLHELTLTPAHDASTP*PLRRSA
Trigger: GGCAGAGCGGCGCAAGGGCCAAGGAGTACTGGCGTC...GTGCGCAGGTGTGAGTGTAAGTTCATGTAGGAGAGTGTATGCGTGTGCGCCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000613735.4
CDS-3UTR CCA 90 bp GGCAGAAGGGGAGGGAGAACAGATCACCTCCTCTCCTTCACTCACTGCAACCTCCCTGCTGAGCACTGCTaGGCTTTGAGGACTGAGCGC +
Preference number: 4 (lower is better)
Translates to: GRRGGRTDHLLSFTHCNLPAEHC*ALRTER
Trigger: GCGCTCAGTCCTCAAAGCCCAGCAGTGCTCAGCAGG...GAGGTTGCAGTGAGTGAAGGAGAGGAGGTGATCTGTTCTCCCTCCCCTTCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp AGTCTCGTGTCGGTGGAAGGCAGCGACCGTTTCAGCTCTGCTGTCAGCTCATTCCCTGCTGAGCACTGCTaGGCTTTGAGGACTGAGCGC +
Preference number: 4 (lower is better)
Translates to: SLVSVEGSDRFSSAVSSFPAEHC*ALRTER
Trigger: GCGCTCAGTCCTCAAAGCCCAGCAGTGCTCAGCAGG...GAATGAGCTGACAGCAGAGCTGAAACGGTCGCTGCCTTCCACCGACACGAGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp GACAGGAGGGATGGCCAGGGACTAACCAAAGGGAGCTGGAGAAGGCCCTGCAGGACATCGATGGAGCCATaGAGCTTCCCCTTGGTGATG +
Preference number: 4 (lower is better)
Translates to: DRRDGQGLTKGSWRRPCRTSMEP*SFPLVM
Trigger: CATCACCAAGGGGAAGCTCCATGGCTCCATCGATGT...CCTGCAGGGCCTTCTCCAGCTCCCTTTGGTTAGTCCCTGGCCATCCCTCCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp AACTTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGACAGGTGCCTGTTGTCACTGAGGCCTaGTGTGTGGGGATAACAGGG +
Preference number: 4 (lower is better)
Translates to: NLHSHLRTRCRWVRGQVPVVTEA*CVGITG
Trigger: CCCTGTTATCCCCACACACCAGGCCTCAGTGACAAC...AGGCACCTGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp GCAGCTGCTCGATCCTTCTCTTCTGGGCCTCAGCGGCCTGTATGTTCCCCTCCTGTTGTCACTGAGGCCTaGTGTGTGGGGATAACAGGG +
Preference number: 4 (lower is better)
Translates to: AAARSFSSGPQRPVCSPPVVTEA*CVGITG
Trigger: CCCTGTTATCCCCACACACCAGGCCTCAGTGACAAC...AGGAGGGGAACATACAGGCCGCTGAGGCCCAGAAGAGAAGGATCGAGCAGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp AGCCGGCTCGGTGGTATGTGGAGGAGTAGGCCGAGACAGCAAAGGCTGCGATGTTCCTTGGCAAAGCTCTaGGTGCACCACATGCGGCTT +
Preference number: 4 (lower is better)
Translates to: SRLGGMWRSRPRQQRLRCSLAKL*VHHMRL
Trigger: AAGCCGCATGTGGTGCACCCAGAGCTTTGCCAAGGA...ACATCGCAGCCTTTGCTGTCTCGGCCTACTCCTCCACATACCACCGAGCCGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579728.5
CDS-3UTR CCA 90 bp GGAGCCCTGCTTGCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCTACAATGGTGTCATCCTTaGCAAAGCTCTGGGTGCACC +
Preference number: 4 (lower is better)
Translates to: GALLACKQGTGAHAYTLLQWCHP*QSSGCT
Trigger: GGTGCACCCAGAGCTTTGCCAAGGATGACACCATTG...TAGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGCAAGCAGGGCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp CTCAGCGGCCTGTATGTTCCCCTCCTCCAGGTACCTCTGGTCTGGCCGGAGTCTCAATGGTGTCATCCTTaGCAAAGCTCTGGGTGCACC +
Preference number: 4 (lower is better)
Translates to: LSGLYVPLLQVPLVWPESQWCHP*QSSGCT
Trigger: GGTGCACCCAGAGCTTTGCCAAGGATGACACCATTG...AGACTCCGGCCAGACCAGAGGTACCTGGAGGAGGGGAACATACAGGCCGCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp TTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGACAGGTGCCTTGGCAATGGTGTCATCCTTaGCAAAGCTCTGGGTGCACC +
Preference number: 4 (lower is better)
Translates to: LHSHLRTRCRWVRGQVPWQWCHP*QSSGCT
Trigger: GGTGCACCCAGAGCTTTGCCAAGGATGACACCATTG...CCAAGGCACCTGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp ACAGGCGCACACGCATACACTCTCCTACATGAACTTACACTCACACCTGCGCACGGCATAGTCTGTGGGTaGCAGCCCACGGGTGCCCGA +
Preference number: 4 (lower is better)
Translates to: TGAHAYTLLHELTLTPAHGIVCG*QPTGAR
Trigger: TCGGGCACCCGTGGGCTGCCACCCACAGACTATGCC...GTGCGCAGGTGTGAGTGTAAGTTCATGTAGGAGAGTGTATGCGTGTGCGCCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp AACTTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGACAGGTGCCTGACAACTCTGAGCCCTaGTGCATGTCCCTCAGTTGG +
Preference number: 4 (lower is better)
Translates to: NLHSHLRTRCRWVRGQVPDNSEP*CMSLSW
Trigger: CCAACTGAGGGACATGCACCAGGGCTCAGAGTTGTC...AGGCACCTGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp CCCAAGTACCCCAAAGGGGACAGGAATCGGAATGGTGAAGCGGGAAGGGTCTTAGAGGTGGACAGTGAGTaGAGGCGCCTCTGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: PKYPKGDRNRNGEAGRVLEVDSE*RRLWPV
Trigger: CACTGGCCAGAGGCGCCTCCACTCACTGTCCACCTC...TAAGACCCTTCCCGCTTCACCATTCCGATTCCTGTCCCCTTTGGGGTACTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp CTTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGACAGGTGCCTTGAAGGTGATCTTGCAGTaGCAGGAGCTGTCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: LTLTPAHSLPVGQRTGALKVILQ*QELSCV
Trigger: CACACAGGACAGCTCCTGCCACTGCAAGATCACCTT...CAAGGCACCTGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS-3UTR CCA 90 bp GAGGCAGACTGTGAGAAAGAGCAGCGATGTGGTGGACCCCCAGCAGGGGGAAGGGCACCTCGTGGACATTaGAACTCCAGTACTTGGCCT +
Preference number: 4 (lower is better)
Translates to: EADCEKEQRCGGPPAGGRAPRGH*NSSTWP
Trigger: AGGCCAAGTACTGGAGTTCCAATGTCCACGAGGTGC...CCTTCCCCCTGCTGGGGGTCCACCACATCGCTGCTCTTTCTCACAGTCTGCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS-3UTR CCA 90 bp GGTCTTACATGCTGGTTGTCTGGGGCAAGGAGACTGGGGAAGCACAGATTCTGCGGTTTCCAGATGCACTaGCCACCTGGCGTGGGTCCC +
Preference number: 4 (lower is better)
Translates to: GLTCWLSGARRLGKHRFCGFQMH*PPGVGP
Trigger: GGGACCCACGCCAGGTGGCCAGTGCATCTGGAAACC...GCAGAATCTGTGCTTCCCCAGTCTCCTTGCCCCAGACAACCAGCATGTAAGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp ACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGACAGGTGCCTTGGGCTCCAGTAGGTATTGTTaGTCACCCACCACTCTTTCC +
Preference number: 4 (lower is better)
Translates to: TLTPAHSLPVGQRTGALGSSRYC*SPTTLS
Trigger: GGAAAGAGTGGTGGGTGACCAACAATACCTACTGGA...GCCCAAGGCACCTGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp CCTCCAGGTACCTCTGGTCTGGCCGGAGTCTCGTGTCGGTGGAAGGCAGCGACCTCCAGTAGGTATTGTTaGTCACCCACCACTCTTTCC +
Preference number: 4 (lower is better)
Translates to: PPGTSGLAGVSCRWKAATSSRYC*SPTTLS
Trigger: GGAAAGAGTGGTGGGTGACCAACAATACCTACTGGA...GGTCGCTGCCTTCCACCGACACGAGACTCCGGCCAGACCAGAGGTACCTGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578461.1
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp GCCTCCAGTAGGTATTGTTGGTCACCCACCACTCTTTCCCGCTGCTATCCGTCTCATGTTCCCATAGCCTaGCTCGGCCCGCAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: ASSRYCWSPTTLSRCYPSHVPIA*LGPQPP
Trigger: TGGAGGCTGCGGGCCGAGCCAGGCTATGGGAACATG...AGACGGATAGCAGCGGGAAAGAGTGGTGGGTGACCAACAATACCTACTGGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578461.1
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp CATAGCCTGGCTCGGCCCGCAGCCTCCAGTAGGTATTGTTGGTCACCCACCACTCTGGGGCAAGGAGACTaGGGAAGCACAGATTCTGCT +
Preference number: 4 (lower is better)
Translates to: HSLARPAASSRYCWSPTTLGQGD*GSTDSA
Trigger: AGCAGAATCTGTGCTTCCCCAGTCTCCTTGCCCCAG...AGTGGTGGGTGACCAACAATACCTACTGGAGGCTGCGGGCCGAGCCAGGCTATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp GTACCTCTGGTCTGGCCGGAGTCTCGTGTCGGTGGAAGGCAGCGACCGTTTCAGTACATGCTGGTTGTCTaGGGCAAGGAGACTGGGGAA +
Preference number: 4 (lower is better)
Translates to: VPLVWPESRVGGRQRPFQYMLVV*GKETGE
Trigger: TTCCCCAGTCTCCTTGCCCCAGACAACCAGCATGTA...CTGAAACGGTCGCTGCCTTCCACCGACACGAGACTCCGGCCAGACCAGAGGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp GCACAGAAAGCCTGGGGAGCGTCAAGGAGTCCCCTGTGTCCTAGGAAGGCACTGCAGGGACGAAGGAGCTaGAAGCTGCAGGCATTTTGC +
Preference number: 4 (lower is better)
Translates to: AQKAWGASRSPLCPRKALQGRRS*KLQAFC
Trigger: GCAAAATGCCTGCAGCTTCCAGCTCCTTCGTCCCTG...CAGTGCCTTCCTAGGACACAGGGGACTCCTTGACGCTCCCCAGGCTTTCTGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp TCAGAGGCAGACTGTGAGAAAGAGCAGCGATGTGGTGGACCCCCAGCAGGGGGACAGGGACGAAGGAGCTaGAAGCTGCAGGCATTTTGC +
Preference number: 4 (lower is better)
Translates to: SEADCEKEQRCGGPPAGGQGRRS*KLQAFC
Trigger: GCAAAATGCCTGCAGCTTCCAGCTCCTTCGTCCCTG...TCCCCCTGCTGGGGGTCCACCACATCGCTGCTCTTTCTCACAGTCTGCCTCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp TGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCTACATGAACTTACACTCCGCACTCGCTGCCGGTaGGTCAGAGGACAGGTGCCT +
Preference number: 4 (lower is better)
Translates to: CKQGTGAHAYTLLHELTLRTRCR*VRGQVP
Trigger: AGGCACCTGTCCTCTGACCCACCGGCAGCGAGTGCG...GAGTGTAAGTTCATGTAGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp GCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCTACATGAACTTACAAGAGCAGCGATGTGGTaGACCCCCAGCAGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: ACKQGTGAHAYTLLHELTRAAMW*TPSRGK
Trigger: CTTCCCCCTGCTGGGGGTCCACCACATCGCTGCTCT...TGTAAGTTCATGTAGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp GTTCCCATAGCCTGGCTCGGCCCGCAGCCTCCAGTAGGTATTGTTGGTCACCCAGAGGGGTTCAGAGACTaGACAAGCGAGACCTCCTCA +
Preference number: 4 (lower is better)
Translates to: VPIAWLGPQPPVGIVGHPEGFRD*TSETSS
Trigger: TGAGGAGGTCTCGCTTGTCCAGTCTCTGAACCCCTC...TGGGTGACCAACAATACCTACTGGAGGCTGCGGGCCGAGCCAGGCTATGGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579728.5
CDS-3UTR CCA 90 bp TTTGCGCCTGTCTCGCTGCAGCTGCTCGATCCTTCTCTTCTGGGCCTCAGCGGCCAGCTCCAAGGCAAATaGGTTTCCAGATGCACTGGC +
Preference number: 4 (lower is better)
Translates to: FAPVSLQLLDPSLLGLSGQLQGK*VSRCTG
Trigger: GCCAGTGCATCTGGAAACCCATTTGCCTTGGAGCTG...GCCGCTGAGGCCCAGAAGAGAAGGATCGAGCAGCTGCAGCGAGACAGGCGCAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578461.1
CDS-3UTR TCA 90 bp GGGACAGGAATCGGAATGGTGAAGCGGGAAGGGTCTTACATGCTGGTTGTCTGGCTGGGCTTTGAGGACTaGGCGCTCTCAGGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: GTGIGMVKREGSYMLVVWLGFED*ALSGRK
Trigger: CTTCCTGCCTGAGAGCGCTCAGTCCTCAAAGCCCAG...CCAGACAACCAGCATGTAAGACCCTTCCCGCTTCACCATTCCGATTCCTGTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR TCA 90 bp GCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCTACATGAACTTACACTGGGCTTTGAGGACTaGGCGCTCTCAGGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: ACKQGTGAHAYTLLHELTLGFED*ALSGRK
Trigger: CTTCCTGCCTGAGAGCGCTCAGTCCTCAAAGCCCAG...TGTAAGTTCATGTAGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR TCA 90 bp GGAACTCCAGTACTTGGCCTTGCAGAAGGTGATCTTGCAGTGGCAGGAGCTGTCCTGGGCTTTGAGGACTaGGCGCTCTCAGGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: GTPVLGLAEGDLAVAGAVLGFED*ALSGRK
Trigger: CTTCCTGCCTGAGAGCGCTCAGTCCTCAAAGCCCAG...GACAGCTCCTGCCACTGCAAGATCACCTTCTGCAAGGCCAAGTACTGGAGTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579728.5
CDS-3UTR TCA 90 bp GGAAGGGTCTTACATGCTGGTTGTCTGGGGCAAGGAGACTGGGGAAGCACAGATAGCTCAGAGGCCTGCTaGGCACTGCTGGGCTTTGAG +
Preference number: 4 (lower is better)
Translates to: GRVLHAGCLGQGDWGSTDSSEAC*ALLGFE
Trigger: CTCAAAGCCCAGCAGTGCTCAGCAGGCCTCTGAGCT...ATCTGTGCTTCCCCAGTCTCCTTGCCCCAGACAACCAGCATGTAAGACCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR TCA 90 bp ATGGTGAAGCGGGAAGGGTCTTACATGCTGGTTGTCTGGGGCAAGGAGACTGGGCTCTTCTTGAGCAGGTaGCCTTCCTGCCTCTCAGGC +
Preference number: 4 (lower is better)
Translates to: MVKREGSYMLVVWGKETGLFLSR*PSCLSG
Trigger: GCCTGAGAGGCAGGAAGGTCACCTGCTCAAGAAGAG...CCCAGTCTCCTTGCCCCAGACAACCAGCATGTAAGACCCTTCCCGCTTCACCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR TCA 90 bp AGCGGGAAGGGTCTTACATGCTGGTTGTCTGGGGCAAGGAGACTGGGGAAGCACTCTTTCGGTTGTCACTaGGGCCTGGTGTGTGGGGAT +
Preference number: 4 (lower is better)
Translates to: SGKGLTCWLSGARRLGKHSFGCH*GLVCGD
Trigger: ATCCCCACACACCAGGCCTCAGTGACAACCGAAAGA...GTGCTTCCCCAGTCTCCTTGCCCCAGACAACCAGCATGTAAGACCCTTCCCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR TCA 90 bp AACTTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGACAGGTGCCTCAGACAGGCTGGTGGTaGTTTCACTGGTACAGGACT +
Preference number: 4 (lower is better)
Translates to: NLHSHLRTRCRWVRGQVPQTGWW*FHWYRT
Trigger: AGTCCTGTACCAGTGAAATCACCACCAGCCTGTCTG...AGGCACCTGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS-3UTR TCA 90 bp AGCGGGAAGGGTCTTACATGCTGGTTGTCTGGGGCAAGGAGACTGGGGAAGCACCCTGTGTGTTTCGGATaGGCACCTCCCCATAGTGCT +
Preference number: 4 (lower is better)
Translates to: SGKGLTCWLSGARRLGKHPVCFG*APPHSA
Trigger: AGCACTATGGGGAGGTGCTCATCCGAAACACACAGG...GTGCTTCCCCAGTCTCCTTGCCCCAGACAACCAGCATGTAAGACCCTTCCCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000007414.8
ENST00000579728.5
CDS-3UTR TCA 90 bp GTTTTCCTCCATGACTTTGCGCCTGTCTCGCTGCAGCTGCTCGATCCTTCTCTTCGGGAGGGAACCGCTTaGGGATCAGGGACGAAGGAG +
Preference number: 4 (lower is better)
Translates to: VFLHDFAPVSLQLLDPSLREGTA*GSGTKE
Trigger: CTCCTTCGTCCCTGATCCTCAAGCGGTTCCCTCCCG...AAGAGAAGGATCGAGCAGCTGCAGCGAGACAGGCGCAAAGTCATGGAGGAAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
CDS-3UTR TCA 90 bp GCCCTGCTTGCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCTACATATCAGAGGCAGACTGTaGGAAAGAGCAGCGATGTGG +
Preference number: 4 (lower is better)
Translates to: ALLACKQGTGAHAYTLLHIRGRL*ERAAMW
Trigger: CCACATCGCTGCTCTTTCTCACAGTCTGCCTCTGAT...ATGTAGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGCAAGCAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR TCA 90 bp CCCAAGTACCCCAAAGGGGACAGGAATCGGAATGGTGAAGCGGGAAGGGTCTTACCCTCCCACACCCTCTaGGATAAGGGCTCCCCAACA +
Preference number: 4 (lower is better)
Translates to: PKYPKGDRNRNGEAGRVLPSHTL*DKGSPT
Trigger: TGTTGGGGAGCCCTTATCTCAGAGGGTGTGGGAGGG...TAAGACCCTTCCCGCTTCACCATTCCGATTCCTGTCCCCTTTGGGGTACTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000579728.5
CDS-3UTR GCA 90 bp GAGCCCTGCTTGCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCTACACAAAGTATCTCTTGTaGCAGCCCTTCAGAGGCCAC +
Preference number: 4 (lower is better)
Translates to: EPCLPASRAQAHTHTLSYTKYLL*QPFRGH
Trigger: GTGGCCTCTGAAGGGCTGGCACAAGAGATACTTTGT...GTAGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGCAAGCAGGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp AAGCAGGGCACAGGCGCACACGCATACACTCTCCTACATGAACTTACACTCACACGGTGGGCACGCAGCTaGGCCACCCAGCTCTGGAAT +
Preference number: 4 (lower is better)
Translates to: KQGTGAHAYTLLHELTLTRWARS*ATQLWN
Trigger: ATTCCAGAGCTGGGTGGCGCAGCTGCGTGCCCACCG...TGTGAGTGTAAGTTCATGTAGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp CGCCTGAAGAAGCGAGCCTGGTGTACGATGTTGTTTTCCTCCATGACTTTGCGCGCTGAGGGGATTCGGTaGAGGGACTCCAGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: RLKKRAWCTMLFSSMTLRAEGIR*RDSRLW
Trigger: CCAGAGCCTGGAGTCCCTGCACCGAATCCCCTCAGC...GCGCAAAGTCATGGAGGAAAACAACATCGTACACCAGGCTCGCTTCTTCAGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp CTTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGACAGGTGCCTTGATGTACAGAGCTTCTTaGTCCTCAGGGTTGAGGGAG +
Preference number: 4 (lower is better)
Translates to: LTLTPAHSLPVGQRTGALMYRAS*SSGLRE
Trigger: CTCCCTCAACCCTGAGGAGCAAGAAGCTCTGTACAT...CAAGGCACCTGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS-3UTR GCA 90 bp GGGACAGTCTTTATTGGAGCTTGGAATGTCATAGCAATTCGCCCTCATCAGAGGCGCAGGGGTCGGCGATaGGGCTGGCCTGGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: GTVFIGAWNVIAIRPHQRRRGRR*GWPGPG
Trigger: TCCTGGACCAGGCCAGCCGCATCGCCGACCCCTGCG...CCTCTGATGAGGGCGAATTGCTATGACATTCCAAGCTCCAATAAAGACTGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS-3UTR GCA 90 bp AAGGTGATCTTGCAGTGGCAGGAGCTGTCCTGTGTGTTTCGGATGAGCACCTCCCGGTACAGCCCCTCGTaGCACTTCCCAAAGAGTCGG +
Preference number: 4 (lower is better)
Translates to: KVILQWQELSCVFRMSTSRYSPS*HFPKSR
Trigger: CCGACTCTTTGGGAAGTGGCACGAGGGGCTGTACCG...GGAGGTGCTCATCCGAAACACACAGGACAGCTCCTGCCACTGCAAGATCACCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579728.5
CDS-3UTR GCA 90 bp AACTTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGACAGGTGCCTCGACCGTTTCAGCTCTaGTGTCAGCTCATTCAGCTC +
Preference number: 4 (lower is better)
Translates to: NLHSHLRTRCRWVRGQVPRPFQL*CQLIQL
Trigger: GAGCTGAATGAGCTGACAGCAGAGCTGAAACGGTCG...AGGCACCTGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp GGGGAGGGAGAACAGATCACCTCCTCTCCTTCACTCACTGCAACCTCACCGCTGCTGTCTCGCTGCAGCTaGTCGATCCTTCTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: GEGEQITSSPSLTATSPLLSRCS*SILLFW
Trigger: CCAGAAGAGAAGGATCGAGCAGCTGCAGCGAGACAG...CAGCGGTGAGGTTGCAGTGAGTGAAGGAGAGGAGGTGATCTGTTCTCCCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp AGGGGAGGGAGAACAGATCACCTCCTCTCCTTCACTCACTGCAACCTCACCGCTTTGCGCCTGTCTCGCTaGAGCTGCTCGATCCTTCTC +
Preference number: 4 (lower is better)
Translates to: RGGRTDHLLSFTHCNLTALRLSR*SCSILL
Trigger: GAGAAGGATCGAGCAGCTGCAGCGAGACAGGCGCAA...AGCGGTGAGGTTGCAGTGAGTGAAGGAGAGGAGGTGATCTGTTCTCCCTCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp CGGAATGGTGAAGCGGGAAGGGTCTTACATGCTGGTTGTCTGGGGCAAGGAGACGGCGGGTCCCTCTCTTaGAAGTCCATGGAGAAGGGA +
Preference number: 4 (lower is better)
Translates to: RNGEAGRVLHAGCLGQGDGGSLS*KSMEKG
Trigger: TCCCTTCTCCATGGACTTCCAAGAGAGGGACCCGCC...GTCTCCTTGCCCCAGACAACCAGCATGTAAGACCCTTCCCGCTTCACCATTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp TCCTCCATGACTTTGCGCCTGTCTCGCTGCAGCTGCTCGATCCTTCTCTTCTGGGGCGGGTCCCTCTCTTaGAAGTCCATGGAGAAGGGA +
Preference number: 4 (lower is better)
Translates to: SSMTLRLSRCSCSILLFWGGSLS*KSMEKG
Trigger: TCCCTTCTCCATGGACTTCCAAGAGAGGGACCCGCC...CCAGAAGAGAAGGATCGAGCAGCTGCAGCGAGACAGGCGCAAAGTCATGGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp AGGGAGCCCTGCTTGCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCTCAAGGTCAATGCGCTaGGCCTTTTTGTTGATGGAC +
Preference number: 4 (lower is better)
Translates to: REPCLPASRAQAHTHTLSSRSMR*AFLLMD
Trigger: GTCCATCAACAAAAAGGCCCAGCGCATTGACCTTGA...GGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGCAAGCAGGGCTCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp GAGGGAGCCCTGCTTGCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCTCTGGAATAGGTCCTaGGATTTGATCTTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: EGALLACKQGTGAHAYTLLWNRS*DLILRW
Trigger: CCACCTCAAGATCAAATCCCAGGACCTATTCCAGAG...GAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGCAAGCAGGGCTCCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp GCAGACTGTGAGAAAGAGCAGCGATGTGGTGGACCCCCAGCAGGGGGAAGGCGGCTCTGGAATAGGTCCTaGGATTTGATCTTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: ADCEKEQRCGGPPAGGRRLWNRS*DLILRW
Trigger: CCACCTCAAGATCAAATCCCAGGACCTATTCCAGAG...CCGCCTTCCCCCTGCTGGGGGTCCACCACATCGCTGCTCTTTCTCACAGTCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp TGCTGGTTGTCTGGGGCAAGGAGACTGGGGAAGCACAGATTCTGCTTCTCACCCAGGGACTCCAGGCTCTaGAGGAGCCTGTGTAGTTCC +
Preference number: 4 (lower is better)
Translates to: CWLSGARRLGKHRFCFSPRDSRL*RSLCSS
Trigger: GGAACTACACAGGCTCCTCCAGAGCCTGGAGTCCCT...GGGTGAGAAGCAGAATCTGTGCTTCCCCAGTCTCCTTGCCCCAGACAACCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp ACTCTCCTACATGAACTTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGGACTCCAGGCTCTaGAGGAGCCTGTGTAGTTCC +
Preference number: 4 (lower is better)
Translates to: TLLHELTLTPAHSLPVGQRDSRL*RSLCSS
Trigger: GGAACTACACAGGCTCCTCCAGAGCCTGGAGTCCCT...CTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAGTTCATGTAGGAGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp GGGGAGGGAGAACAGATCACCTCCTCTCCTTCACTCACTGCAACCTCACCGCTGGGTAGCGAGACAGGTTaGGAACAGAGCCATGGAGAC +
Preference number: 4 (lower is better)
Translates to: GEGEQITSSPSLTATSPLGSETG*EQSHGD
Trigger: GTCTCCATGGCTCTGTTCCCAACCTGTCTCGCTACC...CAGCGGTGAGGTTGCAGTGAGTGAAGGAGAGGAGGTGATCTGTTCTCCCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp AAGCAGGGCACAGGCGCACACGCATACACTCTCCTACATGAACTTACACTCACAGGCATAGTCTGTGGGTaGCAGCCCACGGGTGCCCGA +
Preference number: 4 (lower is better)
Translates to: KQGTGAHAYTLLHELTLTGIVCG*QPTGAR
Trigger: TCGGGCACCCGTGGGCTGCCACCCACAGACTATGCC...TGTGAGTGTAAGTTCATGTAGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp TACATGCTGGTTGTCTGGGGCAAGGAGACTGGGGAAGCACAGATTCTGCTTCTCTGGTGTCGGAGGAGGTaGACAGTGAGTGGAGGCGCC +
Preference number: 4 (lower is better)
Translates to: YMLVVWGKETGEAQILLLWCRRR*TVSGGA
Trigger: GGCGCCTCCACTCACTGTCCACCTCCTCCGACACCA...GAGAAGCAGAATCTGTGCTTCCCCAGTCTCCTTGCCCCAGACAACCAGCATGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp GTTCCCATAGCCTGGCTCGGCCCGCAGCCTCCAGTAGGTATTGTTGGTCACCCAAGCTCCAAGGCAAACTaGGTGAAGCCGAAGTTTCGC +
Preference number: 4 (lower is better)
Translates to: VPIAWLGPQPPVGIVGHPSSKAN*VKPKFR
Trigger: GCGAAACTTCGGCTTCACCCAGTTTGCCTTGGAGCT...TGGGTGACCAACAATACCTACTGGAGGCTGCGGGCCGAGCCAGGCTATGGGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp GGGACAGGAATCGGAATGGTGAAGCGGGAAGGGTCTTACATGCTGGTTGTCTGGCAGGTACCTCTGGTCTaGCCGGAGTCTCGTGTCGGT +
Preference number: 4 (lower is better)
Translates to: GTGIGMVKREGSYMLVVWQVPLV*PESRVG
Trigger: ACCGACACGAGACTCCGGCCAGACCAGAGGTACCTG...CCAGACAACCAGCATGTAAGACCCTTCCCGCTTCACCATTCCGATTCCTGTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp GGTCTTACATGCTGGTTGTCTGGGGCAAGGAGACTGGGGAAGCACAGATTCTGCTCCTCCAGGTACCTCTaGTCTGGCCGGAGTCTCGTG +
Preference number: 4 (lower is better)
Translates to: GLTCWLSGARRLGKHRFCSSRYL*SGRSLV
Trigger: CACGAGACTCCGGCCAGACCAGAGGTACCTGGAGGA...GCAGAATCTGTGCTTCCCCAGTCTCCTTGCCCCAGACAACCAGCATGTAAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp CCCAAGTACCCCAAAGGGGACAGGAATCGGAATGGTGAAGCGGGAAGGGTCTTATCCTCCAGGTACCTCTaGTCTGGCCGGAGTCTCGTG +
Preference number: 4 (lower is better)
Translates to: PKYPKGDRNRNGEAGRVLSSRYL*SGRSLV
Trigger: CACGAGACTCCGGCCAGACCAGAGGTACCTGGAGGA...TAAGACCCTTCCCGCTTCACCATTCCGATTCCTGTCCCCTTTGGGGTACTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp GGAAGGGTCTTACATGCTGGTTGTCTGGGGCAAGGAGACTGGGGAAGCACAGATTCCTCCAGGTACCTCTaGTCTGGCCGGAGTCTCGTG +
Preference number: 4 (lower is better)
Translates to: GRVLHAGCLGQGDWGSTDSSRYL*SGRSLV
Trigger: CACGAGACTCCGGCCAGACCAGAGGTACCTGGAGGA...ATCTGTGCTTCCCCAGTCTCCTTGCCCCAGACAACCAGCATGTAAGACCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp CAGACTGTGAGAAAGAGCAGCGATGTGGTGGACCCCCAGCAGGGGGAAGGCGGGCTGAAGAAGCGAGCCTaGTGTACGATGTTGTTTTCC +
Preference number: 4 (lower is better)
Translates to: QTVRKSSDVVDPQQGEGGLKKRA*CTMLFS
Trigger: GGAAAACAACATCGTACACCAGGCTCGCTTCTTCAG...CCCGCCTTCCCCCTGCTGGGGGTCCACCACATCGCTGCTCTTTCTCACAGTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp TGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCTACATGAACTTACACTCCATGTTCCCATAGCCTaGCTCGGCCCGCAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: CKQGTGAHAYTLLHELTLHVPIA*LGPQPP
Trigger: TGGAGGCTGCGGGCCGAGCCAGGCTATGGGAACATG...GAGTGTAAGTTCATGTAGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp TTGGTCACCCACCACTCTTTCCCGCTGCTATCCGTCTGCCGCCTGAAGAAGCGAATAGGGAACAGATCCTaGGAGCCAGAGTCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: LVTHHSFPLLSVCRLKKRIGNRS*EPESPP
Trigger: TGGGGGAGACTCTGGCTCCCAGGATCTGTTCCCTAT...TCGCTTCTTCAGGCGGCAGACGGATAGCAGCGGGAAAGAGTGGTGGGTGACCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp GGGACAGGAATCGGAATGGTGAAGCGGGAAGGGTCTTACATGCTGGTTGTCTGGTGGGCACAGAAAGCCTaGGGAGCGTCAAGGAGTCCC +
Preference number: 4 (lower is better)
Translates to: GTGIGMVKREGSYMLVVWWAQKA*GASRSP
Trigger: GGGACTCCTTGACGCTCCCCAGGCTTTCTGTGCCCA...CCAGACAACCAGCATGTAAGACCCTTCCCGCTTCACCATTCCGATTCCTGTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp TACATGCTGGTTGTCTGGGGCAAGGAGACTGGGGAAGCACAGATTCTGCTTCTCCTGGGGACAGAGGCCTaGGCACAGAAAGCCTGGGGA +
Preference number: 4 (lower is better)
Translates to: YMLVVWGKETGEAQILLLLGTEA*AQKAWG
Trigger: TCCCCAGGCTTTCTGTGCCCAGGCCTCTGTCCCCAG...GAGAAGCAGAATCTGTGCTTCCCCAGTCTCCTTGCCCCAGACAACCAGCATGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp ACTCTCCTACATGAACTTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGCCAGGACAGGAGGGATaGCCAGGGACTAACCAAAGG +
Preference number: 4 (lower is better)
Translates to: TLLHELTLTPAHSLPVGQPGQEG*PGTNQR
Trigger: CCTTTGGTTAGTCCCTGGCCATCCCTCCTGTCCTGG...CTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAGTTCATGTAGGAGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp CGGAATGGTGAAGCGGGAAGGGTCTTACATGCTGGTTGTCTGGGGCAAGGAGACCCAGGACAGGAGGGATaGCCAGGGACTAACCAAAGG +
Preference number: 4 (lower is better)
Translates to: RNGEAGRVLHAGCLGQGDPGQEG*PGTNQR
Trigger: CCTTTGGTTAGTCCCTGGCCATCCCTCCTGTCCTGG...GTCTCCTTGCCCCAGACAACCAGCATGTAAGACCCTTCCCGCTTCACCATTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp GGGGAGGGAGAACAGATCACCTCCTCTCCTTCACTCACTGCAACCTCACCGCTGCAGGGACGAAGGAGCTaGAAGCTGCAGGCATTTTGC +
Preference number: 4 (lower is better)
Translates to: GEGEQITSSPSLTATSPLQGRRS*KLQAFC
Trigger: GCAAAATGCCTGCAGCTTCCAGCTCCTTCGTCCCTG...CAGCGGTGAGGTTGCAGTGAGTGAAGGAGAGGAGGTGATCTGTTCTCCCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
3UTR CAA 72 bp CTCCGACTGAGCACAGCGCCCTGCACCTCGTGGACATaGGAACTCCAGTACTTGGCCTTGCAGAAGGTGATC +
Preference number: 4 (lower is better)
Translates to: LRLSTAPCTSWT*ELQYLALQKVI
Trigger: GATCACCTTCTGCAAGGCCAAGTACTGGAGTTCCAATGTCCACGAGGTGCAGGGCGCTGTGCTCAGTCGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579728.5
CDS-3UTR TCA 90 bp GCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCTACATGAACTTACACTCTTCTTGAGCAGGTaGCCTTCCTGCCTCTCAGGC +
Preference number: 4 (lower is better)
Translates to: ACKQGTGAHAYTLLHELTLFLSR*PSCLSG
Trigger: GCCTGAGAGGCAGGAAGGTCACCTGCTCAAGAAGAG...TGTAAGTTCATGTAGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR TCA 90 bp ACAGGCGCACACGCATACACTCTCCTACATGAACTTACACTCACACCTGCGCACCCAGGAACCTTCCGGTaGGCAGTACTGGGCAGTGAG +
Preference number: 4 (lower is better)
Translates to: TGAHAYTLLHELTLTPAHPGTFR*AVLGSE
Trigger: CTCACTGCCCAGTACTGCTCACCGGAAGGTTCCTGG...GTGCGCAGGTGTGAGTGTAAGTTCATGTAGGAGAGTGTATGCGTGTGCGCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR TCA 90 bp ACTCTCCTACATGAACTTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGTCTTTCGGTTGTCACTaGGGCCTGGTGTGTGGGGAT +
Preference number: 4 (lower is better)
Translates to: TLLHELTLTPAHSLPVGQSFGCH*GLVCGD
Trigger: ATCCCCACACACCAGGCCTCAGTGACAACCGAAAGA...CTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAGTTCATGTAGGAGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR TCA 90 bp TGCTGGTTGTCTGGGGCAAGGAGACTGGGGAAGCACAGATTCTGCTTCTCACCCTCTTTCGGTTGTCACTaGGGCCTGGTGTGTGGGGAT +
Preference number: 4 (lower is better)
Translates to: CWLSGARRLGKHRFCFSPSFGCH*GLVCGD
Trigger: ATCCCCACACACCAGGCCTCAGTGACAACCGAAAGA...GGGTGAGAAGCAGAATCTGTGCTTCCCCAGTCTCCTTGCCCCAGACAACCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR TCA 90 bp GACAGTCTTTATTGGAGCTTGGAATGTCATAGCAATTCGCCCTCATCAGAGGCAGGTCCCGTTCCATGGTaGGGGCGGCCAGGACGCTGC +
Preference number: 4 (lower is better)
Translates to: DSLYWSLECHSNSPSSEAGPVPW*GRPGRC
Trigger: GCAGCGTCCTGGCCGCCCTCACCATGGAACGGGACC...TGCCTCTGATGAGGGCGAATTGCTATGACATTCCAAGCTCCAATAAAGACTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR TCA 90 bp CCCAAGTACCCCAAAGGGGACAGGAATCGGAATGGTGAAGCGGGAAGGGTCTTATGGCCTTGCAGAAGGTaGTCTTGCAGTGGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: PKYPKGDRNRNGEAGRVLWPCRR*SCSGRS
Trigger: GCTCCTGCCACTGCAAGATCACCTTCTGCAAGGCCA...TAAGACCCTTCCCGCTTCACCATTCCGATTCCTGTCCCCTTTGGGGTACTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000007414.8
ENST00000579728.5
CDS-3UTR TCA 90 bp GCACAGAAAGCCTGGGGAGCGTCAAGGAGTCCCCTGTGTCCTAGGAAGGCACTGTGTTGTTTTCCTCCATaGCTTTGCGCCTGTCTCGCT +
Preference number: 4 (lower is better)
Translates to: AQKAWGASRSPLCPRKALCCFPP*LCACLA
Trigger: AGCGAGACAGGCGCAAAGTCATGGAGGAAAACAACA...CAGTGCCTTCCTAGGACACAGGGGACTCCTTGACGCTCCCCAGGCTTTCTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR TCA 90 bp AATGTCATAGCAATTCGCCCTCATCAGAGGCAGACTGTGAGAAAGAGCAGCGATGGGTTGGGGGTGGGCTaGGATGCAGACCCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: NVIAIRPHQRQTVRKSSDGLGVG*DADPLA
Trigger: GGCCAGAGGGTCTGCATCTCAGCCCACCCCCAACCC...ATCGCTGCTCTTTCTCACAGTCTGCCTCTGATGAGGGCGAATTGCTATGACATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp GGAAGGGTCTTACATGCTGGTTGTCTGGGGCAAGGAGACTGGGGAAGCACAGATAGGCCTGCTGAGCACTaGTGGGCTTTGAGGACTGAG +
Preference number: 4 (lower is better)
Translates to: GRVLHAGCLGQGDWGSTDRPAEH*WALRTE
Trigger: CTCAGTCCTCAAAGCCCAGCAGTGCTCAGCAGGCCT...ATCTGTGCTTCCCCAGTCTCCTTGCCCCAGACAACCAGCATGTAAGACCCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp TACACTCTCCTACATGAACTTACACTCACACCTGCGCACTCGCTGCCGGTGGGTAGGCCTGCTGAGCACTaGTGGGCTTTGAGGACTGAG +
Preference number: 4 (lower is better)
Translates to: YTLLHELTLTPAHSLPVGRPAEH*WALRTE
Trigger: CTCAGTCCTCAAAGCCCAGCAGTGCTCAGCAGGCCT...ACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAGTTCATGTAGGAGAGTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp GCTGCTATCCGTCTGCCGCCTGAAGAAGCGAGCCTGGTGTACGATGTTGTTTTCAGGCCTGCTGAGCACTaGTGGGCTTTGAGGACTGAG +
Preference number: 4 (lower is better)
Translates to: AAIRLPPEEASLVYDVVFRPAEH*WALRTE
Trigger: CTCAGTCCTCAAAGCCCAGCAGTGCTCAGCAGGCCT...GAAAACAACATCGTACACCAGGCTCGCTTCTTCAGGCGGCAGACGGATAGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp GGGACAGGAATCGGAATGGTGAAGCGGGAAGGGTCTTACATGCTGGTTGTCTGGAGGCCTGCTGAGCACTaGTGGGCTTTGAGGACTGAG +
Preference number: 4 (lower is better)
Translates to: GTGIGMVKREGSYMLVVWRPAEH*WALRTE
Trigger: CTCAGTCCTCAAAGCCCAGCAGTGCTCAGCAGGCCT...CCAGACAACCAGCATGTAAGACCCTTCCCGCTTCACCATTCCGATTCCTGTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp GGGACAGTCTTTATTGGAGCTTGGAATGTCATAGCAATTCGCCCTCATCAGAGGGTGGCAGCCCACGGGTaGCCGAGGAGTCCCGAGACT +
Preference number: 4 (lower is better)
Translates to: GTVFIGAWNVIAIRPHQRVAAHG*PRSPET
Trigger: AGTCTCGGGACTCCTCGGGCACCCGTGGGCTGCCAC...CCTCTGATGAGGGCGAATTGCTATGACATTCCAAGCTCCAATAAAGACTGTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp TGGAATGTCATAGCAATTCGCCCTCATCAGAGGCAGACTGTGAGAAAGAGCAGCCTGCTGAGGGAGCTGTaGACCTTCTGGGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: WNVIAIRPHQRQTVRKSSLLREL*TFWARA
Trigger: GGCCCTGGCCCAGAAGGTGCACAGCTCCCTCAGCAG...GCTGCTCTTTCTCACAGTCTGCCTCTGATGAGGGCGAATTGCTATGACATTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp AGTCTCGTGTCGGTGGAAGGCAGCGACCGTTTCAGCTCTGCTGTCAGCTCATTCAACTCTGAGCCCTGGTaGATGTCCCTCAGTTGGTCC +
Preference number: 4 (lower is better)
Translates to: SLVSVEGSDRFSSAVSSFNSEPW*MSLSWS
Trigger: GGACCAACTGAGGGACATGCACCAGGGCTCAGAGTT...GAATGAGCTGACAGCAGAGCTGAAACGGTCGCTGCCTTCCACCGACACGAGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp TACACTCTCCTACATGAACTTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCTGAGCACAGCGCCCTaGACCTCGTGGACATTGGAA +
Preference number: 4 (lower is better)
Translates to: YTLLHELTLTPAHSLPVGLSTAP*TSWTLE
Trigger: TTCCAATGTCCACGAGGTGCAGGGCGCTGTGCTCAG...ACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAGTTCATGTAGGAGAGTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS-3UTR GCA 90 bp AGCGGGAAGGGTCTTACATGCTGGTTGTCTGGGGCAAGGAGACTGGGGAAGCACGGGAAGCACAGATTCTaGTTCTCACCCCAAACGGTG +
Preference number: 4 (lower is better)
Translates to: SGKGLTCWLSGARRLGKHGKHRF*FSPQTV
Trigger: CACCGTTTGGGGTGAGAAGCAGAATCTGTGCTTCCC...GTGCTTCCCCAGTCTCCTTGCCCCAGACAACCAGCATGTAAGACCCTTCCCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp AAGCAGGGCACAGGCGCACACGCATACACTCTCCTACATGAACTTACACTCACAAGCTGGAGAAGGCCCTaGAGGGCCAGGGAAGGGGAA +
Preference number: 4 (lower is better)
Translates to: KQGTGAHAYTLLHELTLTSWRRP*RAREGE
Trigger: TTCCCCTTCCCTGGCCCTGCAGGGCCTTCTCCAGCT...TGTGAGTGTAAGTTCATGTAGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp GGGACAGGAATCGGAATGGTGAAGCGGGAAGGGTCTTACATGCTGGTTGTCTGGGGCGGGTCCCTCTCTTaGAAGTCCATGGAGAAGGGA +
Preference number: 4 (lower is better)
Translates to: GTGIGMVKREGSYMLVVWGGSLS*KSMEKG
Trigger: TCCCTTCTCCATGGACTTCCAAGAGAGGGACCCGCC...CCAGACAACCAGCATGTAAGACCCTTCCCGCTTCACCATTCCGATTCCTGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp CCCAAGTACCCCAAAGGGGACAGGAATCGGAATGGTGAAGCGGGAAGGGTCTTAACAGCCGGACATCGATaGAGCCATGGAGCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: PKYPKGDRNRNGEAGRVLTAGHR*SHGASP
Trigger: AGGGGAAGCTCCATGGCTCCATCGATGTCCGGCTGT...TAAGACCCTTCCCGCTTCACCATTCCGATTCCTGTCCCCTTTGGGGTACTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp GAGCCCTGCTTGCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCTACCTCTGGAATAGGTCCTaGGATTTGATCTTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: EPCLPASRAQAHTHTLSYLWNRS*DLILRW
Trigger: CCACCTCAAGATCAAATCCCAGGACCTATTCCAGAG...GTAGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGCAAGCAGGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp GACAGTCTTTATTGGAGCTTGGAATGTCATAGCAATTCGCCCTCATCAGAGGCAGGCATGTCCAGGCGGTaGGCTAGGCGGTGGGCACGC +
Preference number: 4 (lower is better)
Translates to: DSLYWSLECHSNSPSSEAGMSRR*ARRWAR
Trigger: GCGTGCCCACCGCCTAGCCCACCGCCTGGACATGCC...TGCCTCTGATGAGGGCGAATTGCTATGACATTCCAAGCTCCAATAAAGACTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp TGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCTACATGAACTTACACTCGCTGCTGTTGGAAGCTaGGCACCAGGAACCTTCCGG +
Preference number: 4 (lower is better)
Translates to: CKQGTGAHAYTLLHELTLAAVGS*APGTFR
Trigger: CCGGAAGGTTCCTGGTGCCCAGCTTCCAACAGCAGC...GAGTGTAAGTTCATGTAGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp GTTTTCCTCCATGACTTTGCGCCTGTCTCGCTGCAGCTGCTCGATCCTTCTCTTGCTGCTGTTGGAAGCTaGGCACCAGGAACCTTCCGG +
Preference number: 4 (lower is better)
Translates to: VFLHDFAPVSLQLLDPSLAAVGS*APGTFR
Trigger: CCGGAAGGTTCCTGGTGCCCAGCTTCCAACAGCAGC...AAGAGAAGGATCGAGCAGCTGCAGCGAGACAGGCGCAAAGTCATGGAGGAAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp CCCAAAGGGGACAGGAATCGGAATGGTGAAGCGGGAAGGGTCTTACATGCTGGTGGCAGTAGCTGCTGTTaGAAGCTGGGCACCAGGAAC +
Preference number: 4 (lower is better)
Translates to: PKGDRNRNGEAGRVLHAGGSSCC*KLGTRN
Trigger: GTTCCTGGTGCCCAGCTTCCAACAGCAGCTACTGCC...ACCAGCATGTAAGACCCTTCCCGCTTCACCATTCCGATTCCTGTCCCCTTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp GCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCTACATGAACTTACAGGCAGTAGCTGCTGTTaGAAGCTGGGCACCAGGAAC +
Preference number: 4 (lower is better)
Translates to: ACKQGTGAHAYTLLHELTGSSCC*KLGTRN
Trigger: GTTCCTGGTGCCCAGCTTCCAACAGCAGCTACTGCC...TGTAAGTTCATGTAGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp TTGGTCACCCACCACTCTTTCCCGCTGCTATCCGTCTGCCGCCTGAAGAAGCGAGACCAACCCGTCCAATaGTGTCATCCTTGGCAAAGC +
Preference number: 4 (lower is better)
Translates to: LVTHHSFPLLSVCRLKKRDQPVQ*CHPWQS
Trigger: GCTTTGCCAAGGATGACACCATTGGACGGGTTGGTC...TCGCTTCTTCAGGCGGCAGACGGATAGCAGCGGGAAAGAGTGGTGGGTGACCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp GGGACAGTCTTTATTGGAGCTTGGAATGTCATAGCAATTCGCCCTCATCAGAGGCTGGTCTGCGATAGCTaGGGGGTGAGCTCGCGCCCC +
Preference number: 4 (lower is better)
Translates to: GTVFIGAWNVIAIRPHQRLVCDS*GVSSRP
Trigger: GGGGCGCGAGCTCACCCCCCAGCTATCGCAGACCAG...CCTCTGATGAGGGCGAATTGCTATGACATTCCAAGCTCCAATAAAGACTGTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS-3UTR CCA 90 bp GACAGTCTTTATTGGAGCTTGGAATGTCATAGCAATTCGCCCTCATCAGAGGCAGGTCGGCGATGCGGCTaGCCTGGTCCAGGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: DSLYWSLECHSNSPSSEAGRRCG*PGPGGC
Trigger: GCAGCCTCCTGGACCAGGCCAGCCGCATCGCCGACC...TGCCTCTGATGAGGGCGAATTGCTATGACATTCCAAGCTCCAATAAAGACTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS-3UTR CCA 90 bp ACAGGCGCACACGCATACACTCTCCTACATGAACTTACACTCACACCTGCGCACCGGCTCGGTGGTATGTaGAGGAGTAGGCCGAGACAG +
Preference number: 4 (lower is better)
Translates to: TGAHAYTLLHELTLTPAHRLGGM*RSRPRQ
Trigger: CTGTCTCGGCCTACTCCTCCACATACCACCGAGCCG...GTGCGCAGGTGTGAGTGTAAGTTCATGTAGGAGAGTGTATGCGTGTGCGCCTGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS-3UTR CCA 90 bp TGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCTACATGAACTTACACTCCGGCTCGGTGGTATGTaGAGGAGTAGGCCGAGACAG +
Preference number: 4 (lower is better)
Translates to: CKQGTGAHAYTLLHELTLRLGGM*RSRPRQ
Trigger: CTGTCTCGGCCTACTCCTCCACATACCACCGAGCCG...GAGTGTAAGTTCATGTAGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS-3UTR CCA 90 bp CCCAAGTACCCCAAAGGGGACAGGAATCGGAATGGTGAAGCGGGAAGGGTCTTAGCGCCCTGCACCTCGTaGACATTGGAACTCCAGTAC +
Preference number: 4 (lower is better)
Translates to: PKYPKGDRNRNGEAGRVLAPCTS*TLELQY
Trigger: GTACTGGAGTTCCAATGTCCACGAGGTGCAGGGCGC...TAAGACCCTTCCCGCTTCACCATTCCGATTCCTGTCCCCTTTGGGGTACTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000007414.8
ENST00000579728.5
CDS-3UTR CCA 90 bp TACACTCTCCTACATGAACTTACACTCACACCTGCGCACTCGCTGCCGGTGGGTGGAGTCTCGTGTCGGTaGAAGGCAGCGACCGTTTCA +
Preference number: 4 (lower is better)
Translates to: YTLLHELTLTPAHSLPVGGVSCR*KAATVS
Trigger: TGAAACGGTCGCTGCCTTCCACCGACACGAGACTCC...ACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAGTTCATGTAGGAGAGTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp CCTCCAGTAGGTATTGTTGGTCACCCACCACTCTTTCCCGCTGCTATCCGTCTGGGAGTCTCGTGTCGGTaGAAGGCAGCGACCGTTTCA +
Preference number: 4 (lower is better)
Translates to: PPVGIVGHPPLFPAAIRLGVSCR*KAATVS
Trigger: TGAAACGGTCGCTGCCTTCCACCGACACGAGACTCC...CAGACGGATAGCAGCGGGAAAGAGTGGTGGGTGACCAACAATACCTACTGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578461.1
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp TCCTCCATGACTTTGCGCCTGTCTCGCTGCAGCTGCTCGATCCTTCTCTTCTGGTCGATCCTTCTCTTCTaGGCCTCAGCGGCCTGTATG +
Preference number: 4 (lower is better)
Translates to: SSMTLRLSRCSCSILLFWSILLF*ASAACM
Trigger: CATACAGGCCGCTGAGGCCCAGAAGAGAAGGATCGA...CCAGAAGAGAAGGATCGAGCAGCTGCAGCGAGACAGGCGCAAAGTCATGGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578461.1
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp TCTGGTCTGGCCGGAGTCTCGTGTCGGTGGAAGGCAGCGACCGTTTCAGCTCTGCTGAAGAAGCGAGCCTaGTGTACGATGTTGTTTTCC +
Preference number: 4 (lower is better)
Translates to: SGLAGVSCRWKAATVSALLKKRA*CTMLFS
Trigger: GGAAAACAACATCGTACACCAGGCTCGCTTCTTCAG...CAGAGCTGAAACGGTCGCTGCCTTCCACCGACACGAGACTCCGGCCAGACCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578461.1
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp GAGGCAGACTGTGAGAAAGAGCAGCGATGTGGTGGACCCCCAGCAGGGGGAAGGTCCAGTAGGTATTGTTaGTCACCCACCACTCTTTCC +
Preference number: 4 (lower is better)
Translates to: EADCEKEQRCGGPPAGGRSSRYC*SPTTLS
Trigger: GGAAAGAGTGGTGGGTGACCAACAATACCTACTGGA...CCTTCCCCCTGCTGGGGGTCCACCACATCGCTGCTCTTTCTCACAGTCTGCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp CTCAGCGGCCTGTATGTTCCCCTCCTCCAGGTACCTCTGGTCTGGCCGGAGTCTTCCAGTAGGTATTGTTaGTCACCCACCACTCTTTCC +
Preference number: 4 (lower is better)
Translates to: LSGLYVPLLQVPLVWPESSSRYC*SPTTLS
Trigger: GGAAAGAGTGGTGGGTGACCAACAATACCTACTGGA...AGACTCCGGCCAGACCAGAGGTACCTGGAGGAGGGGAACATACAGGCCGCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578461.1
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp TGGAATGTCATAGCAATTCGCCCTCATCAGAGGCAGACTGTGAGAAAGAGCAGCCTGCAACCTCACCGCTaGGGACAGAGGCCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: WNVIAIRPHQRQTVRKSSLQPHR*GQRPGH
Trigger: GTGCCCAGGCCTCTGTCCCCAGCGGTGAGGTTGCAG...GCTGCTCTTTCTCACAGTCTGCCTCTGATGAGGGCGAATTGCTATGACATTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp TGCTGGTTGTCTGGGGCAAGGAGACTGGGGAAGCACAGATTCTGCTTCTCACCCCAGGGACGAAGGAGCTaGAAGCTGCAGGCATTTTGC +
Preference number: 4 (lower is better)
Translates to: CWLSGARRLGKHRFCFSPQGRRS*KLQAFC
Trigger: GCAAAATGCCTGCAGCTTCCAGCTCCTTCGTCCCTG...GGGTGAGAAGCAGAATCTGTGCTTCCCCAGTCTCCTTGCCCCAGACAACCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp TTTTCCTCCATGACTTTGCGCCTGTCTCGCTGCAGCTGCTCGATCCTTCTCTTCAGAGGACAGGTGCCTTaGGCTGCTCCCCTCCTCATG +
Preference number: 4 (lower is better)
Translates to: FSSMTLRLSRCSCSILLFRGQVP*AAPLLM
Trigger: CATGAGGAGGGGAGCAGCCCAAGGCACCTGTCCTCT...GAAGAGAAGGATCGAGCAGCTGCAGCGAGACAGGCGCAAAGTCATGGAGGAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp ACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGACAGGTGCCTTGGGCTGGGACAGTCTTTATTaGAGCTTGGAATGTCATAGC +
Preference number: 4 (lower is better)
Translates to: TLTPAHSLPVGQRTGALGWDSLY*SLECHS
Trigger: GCTATGACATTCCAAGCTCCAATAAAGACTGTCCCA...GCCCAAGGCACCTGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
3UTR CAA 72 bp GTCTGCCGCCTGAAGAAGCGAGCCTGGTGTACGATGTaGTTTTCCTCCATGACTTTGCGCCTGTCTCGCTGC +
Preference number: 4 (lower is better)
Translates to: VCRLKKRAWCTM*FSSMTLRLSRC
Trigger: GCAGCGAGACAGGCGCAAAGTCATGGAGGAAAACAACATCGTACACCAGGCTCGCTTCTTCAGGCGGCAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578461.1
ENST00000579728.5
ENST00000613735.4
CDS-3UTR TCA 90 bp TACATGCTGGTTGTCTGGGGCAAGGAGACTGGGGAAGCACAGATTCTGCTTCTCCTCTTCTTGAGCAGGTaGCCTTCCTGCCTCTCAGGC +
Preference number: 4 (lower is better)
Translates to: YMLVVWGKETGEAQILLLLFLSR*PSCLSG
Trigger: GCCTGAGAGGCAGGAAGGTCACCTGCTCAAGAAGAG...GAGAAGCAGAATCTGTGCTTCCCCAGTCTCCTTGCCCCAGACAACCAGCATGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR TCA 90 bp CCCAAAGGGGACAGGAATCGGAATGGTGAAGCGGGAAGGGTCTTACATGCTGGTTCTTTCGGTTGTCACTaGGGCCTGGTGTGTGGGGAT +
Preference number: 4 (lower is better)
Translates to: PKGDRNRNGEAGRVLHAGSFGCH*GLVCGD
Trigger: ATCCCCACACACCAGGCCTCAGTGACAACCGAAAGA...ACCAGCATGTAAGACCCTTCCCGCTTCACCATTCCGATTCCTGTCCCCTTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR TCA 90 bp CTACATGAACTTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGACAATCAGAGGCAGACTGTaGGAAAGAGCAGCGATGTGG +
Preference number: 4 (lower is better)
Translates to: LHELTLTPAHSLPVGQRTIRGRL*ERAAMW
Trigger: CCACATCGCTGCTCTTTCTCACAGTCTGCCTCTGAT...TGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAGTTCATGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR TCA 90 bp GCCTCCAGTAGGTATTGTTGGTCACCCACCACTCTTTCCCGCTGCTATCCGTCTGGGAGTGCTCAGAGGTaGAGCAAGGGAGTGACAGAA +
Preference number: 4 (lower is better)
Translates to: ASSRYCWSPTTLSRCYPSGSAQR*SKGVTE
Trigger: TTCTGTCACTCCCTTGCTTCACCTCTGAGCACTCCC...AGACGGATAGCAGCGGGAAAGAGTGGTGGGTGACCAACAATACCTACTGGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579728.5
CDS-3UTR TCA 90 bp GGCAGAAGGGGAGGGAGAACAGATCACCTCCTCTCCTTCACTCACTGCAACCTCCCACCCATTTTCACCTaGTATGGACACTGCCCTGAG +
Preference number: 4 (lower is better)
Translates to: GRRGGRTDHLLSFTHCNLPPIFT*YGHCPE
Trigger: CTCAGGGCAGTGTCCATATCAGGTGAAAATGGGTGG...GAGGTTGCAGTGAGTGAAGGAGAGGAGGTGATCTGTTCTCCCTCCCCTTCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579728.5
CDS-3UTR GCA 90 bp TTTTCCTCCATGACTTTGCGCCTGTCTCGCTGCAGCTGCTCGATCCTTCTCTTCTCTGGGTGCACCACATaGGGCTTGTCCGTTTCCCCT +
Preference number: 4 (lower is better)
Translates to: FSSMTLRLSRCSCSILLFSGCTT*GLSVSP
Trigger: AGGGGAAACGGACAAGCCGCATGTGGTGCACCCAGA...GAAGAGAAGGATCGAGCAGCTGCAGCGAGACAGGCGCAAAGTCATGGAGGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp ACAGGCGCACACGCATACACTCTCCTACATGAACTTACACTCACACCTGCGCACTGGCAAAGCTCTGGGTaGACCACATGCGGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: TGAHAYTLLHELTLTPAHWQSSG*TTCGLS
Trigger: GGACAAGCCGCATGTGGTGCACCCAGAGCTTTGCCA...GTGCGCAGGTGTGAGTGTAAGTTCATGTAGGAGAGTGTATGCGTGTGCGCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp GGAAGGGTCTTACATGCTGGTTGTCTGGGGCAAGGAGACTGGGGAAGCACAGATAACTCTGAGCCCTGGTaGATGTCCCTCAGTTGGTCC +
Preference number: 4 (lower is better)
Translates to: GRVLHAGCLGQGDWGSTDNSEPW*MSLSWS
Trigger: GGACCAACTGAGGGACATGCACCAGGGCTCAGAGTT...ATCTGTGCTTCCCCAGTCTCCTTGCCCCAGACAACCAGCATGTAAGACCCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp AGTCTCGTGTCGGTGGAAGGCAGCGACCGTTTCAGCTCTGCTGTCAGCTCATTCGGGAAGCACAGATTCTaGTTCTCACCCCAAACGGTG +
Preference number: 4 (lower is better)
Translates to: SLVSVEGSDRFSSAVSSFGKHRF*FSPQTV
Trigger: CACCGTTTGGGGTGAGAAGCAGAATCTGTGCTTCCC...GAATGAGCTGACAGCAGAGCTGAAACGGTCGCTGCCTTCCACCGACACGAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp TACACTCTCCTACATGAACTTACACTCACACCTGCGCACTCGCTGCCGGTGGGTGGGAAGGGTCTTACATaGTGGTTGTCTGGGGCAAGG +
Preference number: 4 (lower is better)
Translates to: YTLLHELTLTPAHSLPVGGKGLT*WLSGAR
Trigger: CCTTGCCCCAGACAACCAGCATGTAAGACCCTTCCC...ACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAGTTCATGTAGGAGAGTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp AGCTTGGAATGTCATAGCAATTCGCCCTCATCAGAGGCAGACTGTGAGAAAGAGGGGTCAGAGGACAGGTaGCTTGGGCTGCTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: SLECHSNSPSSEADCEKEGSEDR*LGLLPS
Trigger: GGAGGGGAGCAGCCCAAGGCACCTGTCCTCTGACCC...CTCTTTCTCACAGTCTGCCTCTGATGAGGGCGAATTGCTATGACATTCCAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp AGTCTCGTGTCGGTGGAAGGCAGCGACCGTTTCAGCTCTGCTGTCAGCTCATTCGGCCTGGCAAGAATCTaGCCAACTAGCCCTCATTCT +
Preference number: 4 (lower is better)
Translates to: SLVSVEGSDRFSSAVSSFGLARI*PTSPHS
Trigger: AGAATGAGGGCTAGTTGGGCAGATTCTTGCCAGGCC...GAATGAGCTGACAGCAGAGCTGAAACGGTCGCTGCCTTCCACCGACACGAGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579728.5
CDS-3UTR GCA 90 bp ACAGGCGCACACGCATACACTCTCCTACATGAACTTACACTCACACCTGCGCACAGGTCCTCCCCACCTTaGCGCATCTCTGCAGAGACT +
Preference number: 4 (lower is better)
Translates to: TGAHAYTLLHELTLTPAHRSSPP*RISAET
Trigger: AGTCTCTGCAGAGATGCGGCAAGGTGGGGAGGACCT...GTGCGCAGGTGTGAGTGTAAGTTCATGTAGGAGAGTGTATGCGTGTGCGCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613735.4
CDS-3UTR CCA 90 bp AACTTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGACAGGTGCCTCTCTGGAATAGGTCCTaGGATTTGATCTTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: NLHSHLRTRCRWVRGQVPLWNRS*DLILRW
Trigger: CCACCTCAAGATCAAATCCCAGGACCTATTCCAGAG...AGGCACCTGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp ACTCTCCTACATGAACTTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGGACCAACCCGTCCAATaGTGTCATCCTTGGCAAAGC +
Preference number: 4 (lower is better)
Translates to: TLLHELTLTPAHSLPVGQDQPVQ*CHPWQS
Trigger: GCTTTGCCAAGGATGACACCATTGGACGGGTTGGTC...CTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAGTTCATGTAGGAGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp TGGAATGTCATAGCAATTCGCCCTCATCAGAGGCAGACTGTGAGAAAGAGCAGCGAGCTGTGCACCTTCTaGGCCAGGGCCCAGAAGCTG +
Preference number: 4 (lower is better)
Translates to: WNVIAIRPHQRQTVRKSSELCTF*ARAQKL
Trigger: CAGCTTCTGGGCCCTGGCCCAGAAGGTGCACAGCTC...GCTGCTCTTTCTCACAGTCTGCCTCTGATGAGGGCGAATTGCTATGACATTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp GTCTTTATTGGAGCTTGGAATGTCATAGCAATTCGCCCTCATCAGAGGCAGACTGGCGCCTCTGGCCAGTaGAGGCCTCAGAGACCCCCA +
Preference number: 4 (lower is better)
Translates to: VFIGAWNVIAIRPHQRQTGASGQ*RPQRPP
Trigger: TGGGGGTCTCTGAGGCCTCCACTGGCCAGAGGCGCC...AGTCTGCCTCTGATGAGGGCGAATTGCTATGACATTCCAAGCTCCAATAAAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS-3UTR CCA 90 bp TACACTCTCCTACATGAACTTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCATTCTCAGAAGAGCTaGCGGAGAGGAGAACCTCGC +
Preference number: 4 (lower is better)
Translates to: YTLLHELTLTPAHSLPVGHSQKS*RRGEPR
Trigger: GCGAGGTTCTCCTCTCCGCCAGCTCTTCTGAGAATG...ACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAGTTCATGTAGGAGAGTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS-3UTR CCA 90 bp TGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCTACATGAACTTACACTCTTCCCAAAGAGTCGGTaGAGGACACGGCCACTCCGA +
Preference number: 4 (lower is better)
Translates to: CKQGTGAHAYTLLHELTLFPKSR*RTRPLR
Trigger: TCGGAGTGGCCGTGTCCTCCACCGACTCTTTGGGAA...GAGTGTAAGTTCATGTAGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS-3UTR CCA 90 bp ACTCTCCTACATGAACTTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGCTCCAAGGCAAACTaGGTGAAGCCGAAGTTTCGC +
Preference number: 4 (lower is better)
Translates to: TLLHELTLTPAHSLPVGQSSKAN*VKPKFR
Trigger: GCGAAACTTCGGCTTCACCCAGTTTGCCTTGGAGCT...CTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAGTTCATGTAGGAGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp TACATGCTGGTTGTCTGGGGCAAGGAGACTGGGGAAGCACAGATTCTGCTTCTCGGAGTCTCGTGTCGGTaGAAGGCAGCGACCGTTTCA +
Preference number: 4 (lower is better)
Translates to: YMLVVWGKETGEAQILLLGVSCR*KAATVS
Trigger: TGAAACGGTCGCTGCCTTCCACCGACACGAGACTCC...GAGAAGCAGAATCTGTGCTTCCCCAGTCTCCTTGCCCCAGACAACCAGCATGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp GTTTTCCTCCATGACTTTGCGCCTGTCTCGCTGCAGCTGCTCGATCCTTCTCTTGGAGTCTCGTGTCGGTaGAAGGCAGCGACCGTTTCA +
Preference number: 4 (lower is better)
Translates to: VFLHDFAPVSLQLLDPSLGVSCR*KAATVS
Trigger: TGAAACGGTCGCTGCCTTCCACCGACACGAGACTCC...AAGAGAAGGATCGAGCAGCTGCAGCGAGACAGGCGCAAAGTCATGGAGGAAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578461.1
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp TCATTCAGCTCCAAGGCAAACTGGGTGAAGCCGAAGTTTCGCTCATGGTCGGGGTCGATCCTTCTCTTCTaGGCCTCAGCGGCCTGTATG +
Preference number: 4 (lower is better)
Translates to: SFSSKANWVKPKFRSWSGSILLF*ASAACM
Trigger: CATACAGGCCGCTGAGGCCCAGAAGAGAAGGATCGA...CCCCGACCATGAGCGAAACTTCGGCTTCACCCAGTTTGCCTTGGAGCTGAATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp TGTTCCCATAGCCTGGCTCGGCCCGCAGCCTCCAGTAGGTATTGTTGGTCACCCCTGAAGAAGCGAGCCTaGTGTACGATGTTGTTTTCC +
Preference number: 4 (lower is better)
Translates to: CSHSLARPAASSRYCWSPLKKRA*CTMLFS
Trigger: GGAAAACAACATCGTACACCAGGCTCGCTTCTTCAG...GGGTGACCAACAATACCTACTGGAGGCTGCGGGCCGAGCCAGGCTATGGGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000578461.1
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp GGGACAGTCTTTATTGGAGCTTGGAATGTCATAGCAATTCGCCCTCATCAGAGGCTGCAACCTCACCGCTaGGGACAGAGGCCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: GTVFIGAWNVIAIRPHQRLQPHR*GQRPGH
Trigger: GTGCCCAGGCCTCTGTCCCCAGCGGTGAGGTTGCAG...CCTCTGATGAGGGCGAATTGCTATGACATTCCAAGCTCCAATAAAGACTGTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
3UTR CAA 72 bp CGAGCCTGGTGTACGATGTTGTTTTCCTCCATGACTTaGCGCCTGTCTCGCTGCAGCTGCTCGATCCTTCTC +
Preference number: 4 (lower is better)
Translates to: RAWCTMLFSSMT*RLSRCSCSILL
Trigger: GAGAAGGATCGAGCAGCTGCAGCGAGACAGGCGCAAAGTCATGGAGGAAAACAACATCGTACACCAGGCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578461.1
ENST00000579728.5
ENST00000613735.4
CDS-3UTR TCA 90 bp TACACTCTCCTACATGAACTTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGACAGGCTGGTGGTaGTTTCACTGGTACAGGACT +
Preference number: 4 (lower is better)
Translates to: YTLLHELTLTPAHSLPVGQTGWW*FHWYRT
Trigger: AGTCCTGTACCAGTGAAATCACCACCAGCCTGTCTG...ACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAGTTCATGTAGGAGAGTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS-3UTR TCA 90 bp GGCAGAAGGGGAGGGAGAACAGATCACCTCCTCTCCTTCACTCACTGCAACCTCTGTTGTTTTCCTCCATaGCTTTGCGCCTGTCTCGCT +
Preference number: 4 (lower is better)
Translates to: GRRGGRTDHLLSFTHCNLCCFPP*LCACLA
Trigger: AGCGAGACAGGCGCAAAGTCATGGAGGAAAACAACA...GAGGTTGCAGTGAGTGAAGGAGAGGAGGTGATCTGTTCTCCCTCCCCTTCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR TCA 90 bp GGGACAGTCTTTATTGGAGCTTGGAATGTCATAGCAATTCGCCCTCATCAGAGGTGGAGGCAGGAGGAGTaGGGAACCAGAGCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: GTVFIGAWNVIAIRPHQRWRQEE*GTRASC
Trigger: GCAGGAGGCTCTGGTTCCTCACTCCTCCTGCCTCCA...CCTCTGATGAGGGCGAATTGCTATGACATTCCAAGCTCCAATAAAGACTGTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp CTACATGAACTTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGACAGTCTTGCCGGGTTGTTaGATAATGAAGGATCCCGTC +
Preference number: 4 (lower is better)
Translates to: LHELTLTPAHSLPVGQRTVLPGC*IMKDPV
Trigger: GACGGGATCCTTCATTATGCAACAACCCGGCAAGAC...TGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAGTTCATGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp GGGACAGTCTTTATTGGAGCTTGGAATGTCATAGCAATTCGCCCTCATCAGAGGGCTGAGGGGATTCGGTaGAGGGACTCCAGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: GTVFIGAWNVIAIRPHQRAEGIR*RDSRLW
Trigger: CCAGAGCCTGGAGTCCCTGCACCGAATCCCCTCAGC...CCTCTGATGAGGGCGAATTGCTATGACATTCCAAGCTCCAATAAAGACTGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp GGGACAGTCTTTATTGGAGCTTGGAATGTCATAGCAATTCGCCCTCATCAGAGGCTGCGATGTACACCATaGGCTCGCAGGGGTCGGCGA +
Preference number: 4 (lower is better)
Translates to: GTVFIGAWNVIAIRPHQRLRCTP*ARRGRR
Trigger: TCGCCGACCCCTGCGAGCGCATGGTGTACATCGCAG...CCTCTGATGAGGGCGAATTGCTATGACATTCCAAGCTCCAATAAAGACTGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS-3UTR GCA 90 bp TCAGAGGCAGACTGTGAGAAAGAGCAGCGATGTGGTGGACCCCCAGCAGGGGGATCAGGACATTGTGAATaGAGGATGTCACCTTGTTCC +
Preference number: 4 (lower is better)
Translates to: SEADCEKEQRCGGPPAGGSGHCE*RMSPCS
Trigger: GGAACAAGGTGACATCCTGCATTCACAATGTCCTGA...TCCCCCTGCTGGGGGTCCACCACATCGCTGCTCTTTCTCACAGTCTGCCTCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS-3UTR GCA 90 bp AAGCAGGGCACAGGCGCACACGCATACACTCTCCTACATGAACTTACACTCACACTGAGCACAGCGCCCTaGACCTCGTGGACATTGGAA +
Preference number: 4 (lower is better)
Translates to: KQGTGAHAYTLLHELTLTLSTAP*TSWTLE
Trigger: TTCCAATGTCCACGAGGTGCAGGGCGCTGTGCTCAG...TGTGAGTGTAAGTTCATGTAGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS-3UTR GCA 90 bp TCATTCAGCTCCAAGGCAAACTGGGTGAAGCCGAAGTTTCGCTCATGGTCGGGGCGACCGTTTCAGCTCTaGTGTCAGCTCATTCAGCTC +
Preference number: 4 (lower is better)
Translates to: SFSSKANWVKPKFRSWSGRPFQL*CQLIQL
Trigger: GAGCTGAATGAGCTGACAGCAGAGCTGAAACGGTCG...CCCCGACCATGAGCGAAACTTCGGCTTCACCCAGTTTGCCTTGGAGCTGAATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp TGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCTACATGAACTTACACTCGGGAAGGGTCTTACATaGTGGTTGTCTGGGGCAAGG +
Preference number: 4 (lower is better)
Translates to: CKQGTGAHAYTLLHELTLGKGLT*WLSGAR
Trigger: CCTTGCCCCAGACAACCAGCATGTAAGACCCTTCCC...GAGTGTAAGTTCATGTAGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp GGCAGAAGGGGAGGGAGAACAGATCACCTCCTCTCCTTCACTCACTGCAACCTCGAAGGAGCTGGAAGCTaGAGGCATTTTGCAGTTAGG +
Preference number: 4 (lower is better)
Translates to: GRRGGRTDHLLSFTHCNLEGAGS*RHFAVR
Trigger: CCTAACTGCAAAATGCCTGCAGCTTCCAGCTCCTTC...GAGGTTGCAGTGAGTGAAGGAGAGGAGGTGATCTGTTCTCCCTCCCCTTCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp AGTCTCGTGTCGGTGGAAGGCAGCGACCGTTTCAGCTCTGCTGTCAGCTCATTCGAAGGAGCTGGAAGCTaGAGGCATTTTGCAGTTAGG +
Preference number: 4 (lower is better)
Translates to: SLVSVEGSDRFSSAVSSFEGAGS*RHFAVR
Trigger: CCTAACTGCAAAATGCCTGCAGCTTCCAGCTCCTTC...GAATGAGCTGACAGCAGAGCTGAAACGGTCGCTGCCTTCCACCGACACGAGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp GTCTTTATTGGAGCTTGGAATGTCATAGCAATTCGCCCTCATCAGAGGCAGACTCACCTGCGCACTCGCTaGCGGTGGGTCAGAGGACAG +
Preference number: 4 (lower is better)
Translates to: VFIGAWNVIAIRPHQRQTHLRTR*RWVRGQ
Trigger: CTGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTG...AGTCTGCCTCTGATGAGGGCGAATTGCTATGACATTCCAAGCTCCAATAAAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp TGGAATGTCATAGCAATTCGCCCTCATCAGAGGCAGACTGTGAGAAAGAGCAGCACTTACACTCACACCTaGGCACTCGCTGCCGGTGGG +
Preference number: 4 (lower is better)
Translates to: WNVIAIRPHQRQTVRKSSTYTHT*ALAAGG
Trigger: CCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAGT...GCTGCTCTTTCTCACAGTCTGCCTCTGATGAGGGCGAATTGCTATGACATTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp CGCCTGAAGAAGCGAGCCTGGTGTACGATGTTGTTTTCCTCCATGACTTTGCGCAAACCACAAGACATATaGCCAGCCCCGCCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: RLKKRAWCTMLFSSMTLRKPQDI*PAPPWA
Trigger: TGCCCAAGGCGGGGCTGGGCATATGTCTTGTGGTTT...GCGCAAAGTCATGGAGGAAAACAACATCGTACACCAGGCTCGCTTCTTCAGGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579728.5
CDS-3UTR CCA 90 bp AATGTCATAGCAATTCGCCCTCATCAGAGGCAGACTGTGAGAAAGAGCAGCGATGGTCCCCAGGGTCCATaGACGCCAGTACTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: NVIAIRPHQRQTVRKSSDGPQGP*TPVLLG
Trigger: GCCAAGGAGTACTGGCGTCCATGGACCCTGGGGACC...ATCGCTGCTCTTTCTCACAGTCTGCCTCTGATGAGGGCGAATTGCTATGACATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000613735.4
CDS-3UTR CCA 90 bp CCCAAGTACCCCAAAGGGGACAGGAATCGGAATGGTGAAGCGGGAAGGGTCTTAACATCGATGGAGCCATaGAGCTTCCCCTTGGTGATG +
Preference number: 4 (lower is better)
Translates to: PKYPKGDRNRNGEAGRVLTSMEP*SFPLVM
Trigger: CATCACCAAGGGGAAGCTCCATGGCTCCATCGATGT...TAAGACCCTTCCCGCTTCACCATTCCGATTCCTGTCCCCTTTGGGGTACTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp CTACATGAACTTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGACATCCGTTTCCCCTTCTTaGGTCTTTCGGTTGTCACTG +
Preference number: 4 (lower is better)
Translates to: LHELTLTPAHSLPVGQRTSVSPS*VFRLSL
Trigger: CAGTGACAACCGAAAGACCCAAGAAGGGGAAACGGA...TGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAGTTCATGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp ACTCTCCTACATGAACTTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGTCCGTTTCCCCTTCTTaGGTCTTTCGGTTGTCACTG +
Preference number: 4 (lower is better)
Translates to: TLLHELTLTPAHSLPVGQSVSPS*VFRLSL
Trigger: CAGTGACAACCGAAAGACCCAAGAAGGGGAAACGGA...CTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAGTTCATGTAGGAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp GGGACAGGAATCGGAATGGTGAAGCGGGAAGGGTCTTACATGCTGGTTGTCTGGGACCAACCCGTCCAATaGTGTCATCCTTGGCAAAGC +
Preference number: 4 (lower is better)
Translates to: GTGIGMVKREGSYMLVVWDQPVQ*CHPWQS
Trigger: GCTTTGCCAAGGATGACACCATTGGACGGGTTGGTC...CCAGACAACCAGCATGTAAGACCCTTCCCGCTTCACCATTCCGATTCCTGTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp GGTCTTACATGCTGGTTGTCTGGGGCAAGGAGACTGGGGAAGCACAGATTCTGCGACCAACCCGTCCAATaGTGTCATCCTTGGCAAAGC +
Preference number: 4 (lower is better)
Translates to: GLTCWLSGARRLGKHRFCDQPVQ*CHPWQS
Trigger: GCTTTGCCAAGGATGACACCATTGGACGGGTTGGTC...GCAGAATCTGTGCTTCCCCAGTCTCCTTGCCCCAGACAACCAGCATGTAAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp TTTTCCTCCATGACTTTGCGCCTGTCTCGCTGCAGCTGCTCGATCCTTCTCTTCTTGGGAACAGAGCCATaGAGACGACCAACCCGTCCA +
Preference number: 4 (lower is better)
Translates to: FSSMTLRLSRCSCSILLFLGTEP*RRPTRP
Trigger: TGGACGGGTTGGTCGTCTCCATGGCTCTGTTCCCAA...GAAGAGAAGGATCGAGCAGCTGCAGCGAGACAGGCGCAAAGTCATGGAGGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp TACATGCTGGTTGTCTGGGGCAAGGAGACTGGGGAAGCACAGATTCTGCTTCTCGACAACTCTGAGCCCTaGTGCATGTCCCTCAGTTGG +
Preference number: 4 (lower is better)
Translates to: YMLVVWGKETGEAQILLLDNSEP*CMSLSW
Trigger: CCAACTGAGGGACATGCACCAGGGCTCAGAGTTGTC...GAGAAGCAGAATCTGTGCTTCCCCAGTCTCCTTGCCCCAGACAACCAGCATGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp GGGACAGTCTTTATTGGAGCTTGGAATGTCATAGCAATTCGCCCTCATCAGAGGTGGTGTCGGAGGAGGTaGACAGTGAGTGGAGGCGCC +
Preference number: 4 (lower is better)
Translates to: GTVFIGAWNVIAIRPHQRWCRRR*TVSGGA
Trigger: GGCGCCTCCACTCACTGTCCACCTCCTCCGACACCA...CCTCTGATGAGGGCGAATTGCTATGACATTCCAAGCTCCAATAAAGACTGTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp AGCTTGGAATGTCATAGCAATTCGCCCTCATCAGAGGCAGACTGTGAGAAAGAGTGGTGTCGGAGGAGGTaGACAGTGAGTGGAGGCGCC +
Preference number: 4 (lower is better)
Translates to: SLECHSNSPSSEADCEKEWCRRR*TVSGGA
Trigger: GGCGCCTCCACTCACTGTCCACCTCCTCCGACACCA...CTCTTTCTCACAGTCTGCCTCTGATGAGGGCGAATTGCTATGACATTCCAAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp CCCAAGTACCCCAAAGGGGACAGGAATCGGAATGGTGAAGCGGGAAGGGTCTTATCGAAGAACTCCGTGTaGGAATCAGCAAGGGACAGG +
Preference number: 4 (lower is better)
Translates to: PKYPKGDRNRNGEAGRVLSKNSV*ESARDR
Trigger: CCTGTCCCTTGCTGATTCCCACACGGAGTTCTTCGA...TAAGACCCTTCCCGCTTCACCATTCCGATTCCTGTCCCCTTTGGGGTACTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000007414.8
ENST00000579728.5
CDS-3UTR CCA 90 bp CCCAAGTACCCCAAAGGGGACAGGAATCGGAATGGTGAAGCGGGAAGGGTCTTAAAGGTGATCTTGCAGTaGCAGGAGCTGTCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: PKYPKGDRNRNGEAGRVLKVILQ*QELSCV
Trigger: CACACAGGACAGCTCCTGCCACTGCAAGATCACCTT...TAAGACCCTTCCCGCTTCACCATTCCGATTCCTGTCCCCTTTGGGGTACTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000007414.8
ENST00000579728.5
CDS-3UTR CCA 90 bp TCATTCAGCTCCAAGGCAAACTGGGTGAAGCCGAAGTTTCGCTCATGGTCGGGGGCACCTCGTGGACATTaGAACTCCAGTACTTGGCCT +
Preference number: 4 (lower is better)
Translates to: SFSSKANWVKPKFRSWSGAPRGH*NSSTWP
Trigger: AGGCCAAGTACTGGAGTTCCAATGTCCACGAGGTGC...CCCCGACCATGAGCGAAACTTCGGCTTCACCCAGTTTGCCTTGGAGCTGAATGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579728.5
CDS-3UTR CCA 90 bp GGGACAGTCTTTATTGGAGCTTGGAATGTCATAGCAATTCGCCCTCATCAGAGGGGTTTCCAGATGCACTaGCCACCTGGCGTGGGTCCC +
Preference number: 4 (lower is better)
Translates to: GTVFIGAWNVIAIRPHQRGFQMH*PPGVGP
Trigger: GGGACCCACGCCAGGTGGCCAGTGCATCTGGAAACC...CCTCTGATGAGGGCGAATTGCTATGACATTCCAAGCTCCAATAAAGACTGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp ACAGGCGCACACGCATACACTCTCCTACATGAACTTACACTCACACCTGCGCACCTGGGGCAAGGAGACTaGGGAAGCACAGATTCTGCT +
Preference number: 4 (lower is better)
Translates to: TGAHAYTLLHELTLTPAHLGQGD*GSTDSA
Trigger: AGCAGAATCTGTGCTTCCCCAGTCTCCTTGCCCCAG...GTGCGCAGGTGTGAGTGTAAGTTCATGTAGGAGAGTGTATGCGTGTGCGCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp CCCAAAGGGGACAGGAATCGGAATGGTGAAGCGGGAAGGGTCTTACATGCTGGTTACATGCTGGTTGTCTaGGGCAAGGAGACTGGGGAA +
Preference number: 4 (lower is better)
Translates to: PKGDRNRNGEAGRVLHAGYMLVV*GKETGE
Trigger: TTCCCCAGTCTCCTTGCCCCAGACAACCAGCATGTA...ACCAGCATGTAAGACCCTTCCCGCTTCACCATTCCGATTCCTGTCCCCTTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp ATGGTGAAGCGGGAAGGGTCTTACATGCTGGTTGTCTGGGGCAAGGAGACTGGGAAGGGTCTTACATGCTaGTTGTCTGGGGCAAGGAGA +
Preference number: 4 (lower is better)
Translates to: MVKREGSYMLVVWGKETGKGLTC*LSGARR
Trigger: TCTCCTTGCCCCAGACAACCAGCATGTAAGACCCTT...CCCAGTCTCCTTGCCCCAGACAACCAGCATGTAAGACCCTTCCCGCTTCACCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp TGGAATGTCATAGCAATTCGCCCTCATCAGAGGCAGACTGTGAGAAAGAGCAGCAGAGGACAGGTGCCTTaGGCTGCTCCCCTCCTCATG +
Preference number: 4 (lower is better)
Translates to: WNVIAIRPHQRQTVRKSSRGQVP*AAPLLM
Trigger: CATGAGGAGGGGAGCAGCCCAAGGCACCTGTCCTCT...GCTGCTCTTTCTCACAGTCTGCCTCTGATGAGGGCGAATTGCTATGACATTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp GGAGCCCTGCTTGCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCTATGGGACAGTCTTTATTaGAGCTTGGAATGTCATAGC +
Preference number: 4 (lower is better)
Translates to: GALLACKQGTGAHAYTLLWDSLY*SLECHS
Trigger: GCTATGACATTCCAAGCTCCAATAAAGACTGTCCCA...TAGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGCAAGCAGGGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS-3UTR TCA 90 bp AATGTCATAGCAATTCGCCCTCATCAGAGGCAGACTGTGAGAAAGAGCAGCGATCTGGGCTTTGAGGACTaGGCGCTCTCAGGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: NVIAIRPHQRQTVRKSSDLGFED*ALSGRK
Trigger: CTTCCTGCCTGAGAGCGCTCAGTCCTCAAAGCCCAG...ATCGCTGCTCTTTCTCACAGTCTGCCTCTGATGAGGGCGAATTGCTATGACATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR TCA 90 bp AATGTCATAGCAATTCGCCCTCATCAGAGGCAGACTGTGAGAAAGAGCAGCGATAGCTCAGAGGCCTGCTaGGCACTGCTGGGCTTTGAG +
Preference number: 4 (lower is better)
Translates to: NVIAIRPHQRQTVRKSSDSSEAC*ALLGFE
Trigger: CTCAAAGCCCAGCAGTGCTCAGCAGGCCTCTGAGCT...ATCGCTGCTCTTTCTCACAGTCTGCCTCTGATGAGGGCGAATTGCTATGACATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR TCA 90 bp CCCAAGTACCCCAAAGGGGACAGGAATCGGAATGGTGAAGCGGGAAGGGTCTTAGTCCTAGGAAGGCACTaGAATAGGGAACAGATCCTG +
Preference number: 4 (lower is better)
Translates to: PKYPKGDRNRNGEAGRVLVLGRH*NREQIL
Trigger: CAGGATCTGTTCCCTATTTCAGTGCCTTCCTAGGAC...TAAGACCCTTCCCGCTTCACCATTCCGATTCCTGTCCCCTTTGGGGTACTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp CCCAAAGGGGACAGGAATCGGAATGGTGAAGCGGGAAGGGTCTTACATGCTGGTGTCTTGCCGGGTTGTTaGATAATGAAGGATCCCGTC +
Preference number: 4 (lower is better)
Translates to: PKGDRNRNGEAGRVLHAGVLPGC*IMKDPV
Trigger: GACGGGATCCTTCATTATGCAACAACCCGGCAAGAC...ACCAGCATGTAAGACCCTTCCCGCTTCACCATTCCGATTCCTGTCCCCTTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp GGTCTTACATGCTGGTTGTCTGGGGCAAGGAGACTGGGGAAGCACAGATTCTGCGTCTTGCCGGGTTGTTaGATAATGAAGGATCCCGTC +
Preference number: 4 (lower is better)
Translates to: GLTCWLSGARRLGKHRFCVLPGC*IMKDPV
Trigger: GACGGGATCCTTCATTATGCAACAACCCGGCAAGAC...GCAGAATCTGTGCTTCCCCAGTCTCCTTGCCCCAGACAACCAGCATGTAAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp AAGCAGGGCACAGGCGCACACGCATACACTCTCCTACATGAACTTACACTCACAAACTCTGAGCCCTGGTaGATGTCCCTCAGTTGGTCC +
Preference number: 4 (lower is better)
Translates to: KQGTGAHAYTLLHELTLTNSEPW*MSLSWS
Trigger: GGACCAACTGAGGGACATGCACCAGGGCTCAGAGTT...TGTGAGTGTAAGTTCATGTAGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp GCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCTACATGAACTTACAATGTACAGAGCTTCTTaGTCCTCAGGGTTGAGGGAG +
Preference number: 4 (lower is better)
Translates to: ACKQGTGAHAYTLLHELTMYRAS*SSGLRE
Trigger: CTCCCTCAACCCTGAGGAGCAAGAAGCTCTGTACAT...TGTAAGTTCATGTAGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS-3UTR GCA 90 bp TGGAATGTCATAGCAATTCGCCCTCATCAGAGGCAGACTGTGAGAAAGAGCAGCCTCTCCTTCACTCACTaGAACCTCACCGCTGGGGAC +
Preference number: 4 (lower is better)
Translates to: WNVIAIRPHQRQTVRKSSLSFTH*NLTAGD
Trigger: GTCCCCAGCGGTGAGGTTGCAGTGAGTGAAGGAGAG...GCTGCTCTTTCTCACAGTCTGCCTCTGATGAGGGCGAATTGCTATGACATTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp TACACTCTCCTACATGAACTTACACTCACACCTGCGCACTCGCTGCCGGTGGGTGAAGGAGCTGGAAGCTaGAGGCATTTTGCAGTTAGG +
Preference number: 4 (lower is better)
Translates to: YTLLHELTLTPAHSLPVGEGAGS*RHFAVR
Trigger: CCTAACTGCAAAATGCCTGCAGCTTCCAGCTCCTTC...ACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAGTTCATGTAGGAGAGTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp CATGCTGGTTGTCTGGGGCAAGGAGACTGGGGAAGCACAGATTCTGCTTCTCACTCCGTTTCCCCTTCTTaGGTCTTTCGGTTGTCACTG +
Preference number: 4 (lower is better)
Translates to: HAGCLGQGDWGSTDSASHSVSPS*VFRLSL
Trigger: CAGTGACAACCGAAAGACCCAAGAAGGGGAAACGGA...GTGAGAAGCAGAATCTGTGCTTCCCCAGTCTCCTTGCCCCAGACAACCAGCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp ACAGGCGCACACGCATACACTCTCCTACATGAACTTACACTCACACCTGCGCACCAATGGTGTCATCCTTaGCAAAGCTCTGGGTGCACC +
Preference number: 4 (lower is better)
Translates to: TGAHAYTLLHELTLTPAHQWCHP*QSSGCT
Trigger: GGTGCACCCAGAGCTTTGCCAAGGATGACACCATTG...GTGCGCAGGTGTGAGTGTAAGTTCATGTAGGAGAGTGTATGCGTGTGCGCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp AAGCAGGGCACAGGCGCACACGCATACACTCTCCTACATGAACTTACACTCACATTGGGAACAGAGCCATaGAGACGACCAACCCGTCCA +
Preference number: 4 (lower is better)
Translates to: KQGTGAHAYTLLHELTLTLGTEP*RRPTRP
Trigger: TGGACGGGTTGGTCGTCTCCATGGCTCTGTTCCCAA...TGTGAGTGTAAGTTCATGTAGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp GACAGTCTTTATTGGAGCTTGGAATGTCATAGCAATTCGCCCTCATCAGAGGCAGAGCTGTGCACCTTCTaGGCCAGGGCCCAGAAGCTG +
Preference number: 4 (lower is better)
Translates to: DSLYWSLECHSNSPSSEAELCTF*ARAQKL
Trigger: CAGCTTCTGGGCCCTGGCCCAGAAGGTGCACAGCTC...TGCCTCTGATGAGGGCGAATTGCTATGACATTCCAAGCTCCAATAAAGACTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp AAGCAGGGCACAGGCGCACACGCATACACTCTCCTACATGAACTTACACTCACATGCATGTCCCTCAGTTaGTCCCGTTCCATGGTGAGG +
Preference number: 4 (lower is better)
Translates to: KQGTGAHAYTLLHELTLTCMSLS*SRSMVR
Trigger: CCTCACCATGGAACGGGACCAACTGAGGGACATGCA...TGTGAGTGTAAGTTCATGTAGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp GGGACAGTCTTTATTGGAGCTTGGAATGTCATAGCAATTCGCCCTCATCAGAGGCGGCTCGGTGGTATGTaGAGGAGTAGGCCGAGACAG +
Preference number: 4 (lower is better)
Translates to: GTVFIGAWNVIAIRPHQRRLGGM*RSRPRQ
Trigger: CTGTCTCGGCCTACTCCTCCACATACCACCGAGCCG...CCTCTGATGAGGGCGAATTGCTATGACATTCCAAGCTCCAATAAAGACTGTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS-3UTR CCA 90 bp TGGAATGTCATAGCAATTCGCCCTCATCAGAGGCAGACTGTGAGAAAGAGCAGCGCGCCCTGCACCTCGTaGACATTGGAACTCCAGTAC +
Preference number: 4 (lower is better)
Translates to: WNVIAIRPHQRQTVRKSSAPCTS*TLELQY
Trigger: GTACTGGAGTTCCAATGTCCACGAGGTGCAGGGCGC...GCTGCTCTTTCTCACAGTCTGCCTCTGATGAGGGCGAATTGCTATGACATTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS-3UTR CCA 90 bp GTTTTCCTCCATGACTTTGCGCCTGTCTCGCTGCAGCTGCTCGATCCTTCTCTTAGCTCCAAGGCAAACTaGGTGAAGCCGAAGTTTCGC +
Preference number: 4 (lower is better)
Translates to: VFLHDFAPVSLQLLDPSLSSKAN*VKPKFR
Trigger: GCGAAACTTCGGCTTCACCCAGTTTGCCTTGGAGCT...AAGAGAAGGATCGAGCAGCTGCAGCGAGACAGGCGCAAAGTCATGGAGGAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp GGAAGGGTCTTACATGCTGGTTGTCTGGGGCAAGGAGACTGGGGAAGCACAGATAAGGGTCTTACATGCTaGTTGTCTGGGGCAAGGAGA +
Preference number: 4 (lower is better)
Translates to: GRVLHAGCLGQGDWGSTDKGLTC*LSGARR
Trigger: TCTCCTTGCCCCAGACAACCAGCATGTAAGACCCTT...ATCTGTGCTTCCCCAGTCTCCTTGCCCCAGACAACCAGCATGTAAGACCCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp AATGTCATAGCAATTCGCCCTCATCAGAGGCAGACTGTGAGAAAGAGCAGCGATTGGGCACAGAAAGCCTaGGGAGCGTCAAGGAGTCCC +
Preference number: 4 (lower is better)
Translates to: NVIAIRPHQRQTVRKSSDWAQKA*GASRSP
Trigger: GGGACTCCTTGACGCTCCCCAGGCTTTCTGTGCCCA...ATCGCTGCTCTTTCTCACAGTCTGCCTCTGATGAGGGCGAATTGCTATGACATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp TGGAATGTCATAGCAATTCGCCCTCATCAGAGGCAGACTGTGAGAAAGAGCAGCCCAGGACAGGAGGGATaGCCAGGGACTAACCAAAGG +
Preference number: 4 (lower is better)
Translates to: WNVIAIRPHQRQTVRKSSPGQEG*PGTNQR
Trigger: CCTTTGGTTAGTCCCTGGCCATCCCTCCTGTCCTGG...GCTGCTCTTTCTCACAGTCTGCCTCTGATGAGGGCGAATTGCTATGACATTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp AACTTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGACAGGTGCCTTGGGACAGTCTTTATTaGAGCTTGGAATGTCATAGC +
Preference number: 4 (lower is better)
Translates to: NLHSHLRTRCRWVRGQVPWDSLY*SLECHS
Trigger: GCTATGACATTCCAAGCTCCAATAAAGACTGTCCCA...AGGCACCTGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS-3UTR CCA 90 bp TGCTGGTTGTCTGGGGCAAGGAGACTGGGGAAGCACAGATTCTGCTTCTCACCCCTTGGGCACATACTCTaGGGCTCCAAGAAACATTCA +
Preference number: 4 (lower is better)
Translates to: CWLSGARRLGKHRFCFSPLGHIL*GSKKHS
Trigger: TGAATGTTTCTTGGAGCCCCAGAGTATGTGCCCAAG...GGGTGAGAAGCAGAATCTGTGCTTCCCCAGTCTCCTTGCCCCAGACAACCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000579728.5
3UTR CAA 72 bp TTGGAACTCCAGTACTTGGCCTTGCAGAAGGTGATCTaGCAGTGGCAGGAGCTGTCCTGTGTGTTTCGGATG +
Preference number: 4 (lower is better)
Translates to: LELQYLALQKVI*QWQELSCVFRM
Trigger: CATCCGAAACACACAGGACAGCTCCTGCCACTGCAAGATCACCTTCTGCAAGGCCAAGTACTGGAGTTCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579728.5
CDS-3UTR TCA 90 bp AGCTTGGAATGTCATAGCAATTCGCCCTCATCAGAGGCAGACTGTGAGAAAGAGTGGCCTTGCAGAAGGTaGTCTTGCAGTGGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: SLECHSNSPSSEADCEKEWPCRR*SCSGRS
Trigger: GCTCCTGCCACTGCAAGATCACCTTCTGCAAGGCCA...CTCTTTCTCACAGTCTGCCTCTGATGAGGGCGAATTGCTATGACATTCCAAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS-3UTR GCA 90 bp AGGGGAGGGAGAACAGATCACCTCCTCTCCTTCACTCACTGCAACCTCACCGCTTCAGGACATTGTGAATaGAGGATGTCACCTTGTTCC +
Preference number: 4 (lower is better)
Translates to: RGGRTDHLLSFTHCNLTASGHCE*RMSPCS
Trigger: GGAACAAGGTGACATCCTGCATTCACAATGTCCTGA...AGCGGTGAGGTTGCAGTGAGTGAAGGAGAGGAGGTGATCTGTTCTCCCTCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007414.8
ENST00000579728.5
CDS-3UTR GCA 90 bp AATGTCATAGCAATTCGCCCTCATCAGAGGCAGACTGTGAGAAAGAGCAGCGATTTGCGCCTGTCTCGCTaGAGCTGCTCGATCCTTCTC +
Preference number: 4 (lower is better)
Translates to: NVIAIRPHQRQTVRKSSDLRLSR*SCSILL
Trigger: GAGAAGGATCGAGCAGCTGCAGCGAGACAGGCGCAA...ATCGCTGCTCTTTCTCACAGTCTGCCTCTGATGAGGGCGAATTGCTATGACATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp GTCTTTATTGGAGCTTGGAATGTCATAGCAATTCGCCCTCATCAGAGGCAGACTCCTGCTGAGCACTGCTaGGCTTTGAGGACTGAGCGC +
Preference number: 4 (lower is better)
Translates to: VFIGAWNVIAIRPHQRQTPAEHC*ALRTER
Trigger: GCGCTCAGTCCTCAAAGCCCAGCAGTGCTCAGCAGG...AGTCTGCCTCTGATGAGGGCGAATTGCTATGACATTCCAAGCTCCAATAAAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp CATGCTGGTTGTCTGGGGCAAGGAGACTGGGGAAGCACAGATTCTGCTTCTCACTCAAGGTCAATGCGCTaGGCCTTTTTGTTGATGGAC +
Preference number: 4 (lower is better)
Translates to: HAGCLGQGDWGSTDSASHSRSMR*AFLLMD
Trigger: GTCCATCAACAAAAAGGCCCAGCGCATTGACCTTGA...GTGAGAAGCAGAATCTGTGCTTCCCCAGTCTCCTTGCCCCAGACAACCAGCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp TACACTCTCCTACATGAACTTACACTCACACCTGCGCACTCGCTGCCGGTGGGTTCAAGGTCAATGCGCTaGGCCTTTTTGTTGATGGAC +
Preference number: 4 (lower is better)
Translates to: YTLLHELTLTPAHSLPVGSRSMR*AFLLMD
Trigger: GTCCATCAACAAAAAGGCCCAGCGCATTGACCTTGA...ACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAGTTCATGTAGGAGAGTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp CCCAAAGGGGACAGGAATCGGAATGGTGAAGCGGGAAGGGTCTTACATGCTGGTTCAAGGTCAATGCGCTaGGCCTTTTTGTTGATGGAC +
Preference number: 4 (lower is better)
Translates to: PKGDRNRNGEAGRVLHAGSRSMR*AFLLMD
Trigger: GTCCATCAACAAAAAGGCCCAGCGCATTGACCTTGA...ACCAGCATGTAAGACCCTTCCCGCTTCACCATTCCGATTCCTGTCCCCTTTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp GGGACAGTCTTTATTGGAGCTTGGAATGTCATAGCAATTCGCCCTCATCAGAGGAGGGACTCCAGGCTCTaGAGGAGCCTGTGTAGTTCC +
Preference number: 4 (lower is better)
Translates to: GTVFIGAWNVIAIRPHQRRDSRL*RSLCSS
Trigger: GGAACTACACAGGCTCCTCCAGAGCCTGGAGTCCCT...CCTCTGATGAGGGCGAATTGCTATGACATTCCAAGCTCCAATAAAGACTGTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp TGGAATGTCATAGCAATTCGCCCTCATCAGAGGCAGACTGTGAGAAAGAGCAGCTCCTTGGCAAAGCTCTaGGTGCACCACATGCGGCTT +
Preference number: 4 (lower is better)
Translates to: WNVIAIRPHQRQTVRKSSSLAKL*VHHMRL
Trigger: AAGCCGCATGTGGTGCACCCAGAGCTTTGCCAAGGA...GCTGCTCTTTCTCACAGTCTGCCTCTGATGAGGGCGAATTGCTATGACATTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp TCATTCAGCTCCAAGGCAAACTGGGTGAAGCCGAAGTTTCGCTCATGGTCGGGGCTGAAGAAGCGAGCCTaGTGTACGATGTTGTTTTCC +
Preference number: 4 (lower is better)
Translates to: SFSSKANWVKPKFRSWSGLKKRA*CTMLFS
Trigger: GGAAAACAACATCGTACACCAGGCTCGCTTCTTCAG...CCCCGACCATGAGCGAAACTTCGGCTTCACCCAGTTTGCCTTGGAGCTGAATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp CCCAAGTACCCCAAAGGGGACAGGAATCGGAATGGTGAAGCGGGAAGGGTCTTATCCAGTAGGTATTGTTaGTCACCCACCACTCTTTCC +
Preference number: 4 (lower is better)
Translates to: PKYPKGDRNRNGEAGRVLSSRYC*SPTTLS
Trigger: GGAAAGAGTGGTGGGTGACCAACAATACCTACTGGA...TAAGACCCTTCCCGCTTCACCATTCCGATTCCTGTCCCCTTTGGGGTACTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp ACAGGCGCACACGCATACACTCTCCTACATGAACTTACACTCACACCTGCGCACAAGGGTCTTACATGCTaGTTGTCTGGGGCAAGGAGA +
Preference number: 4 (lower is better)
Translates to: TGAHAYTLLHELTLTPAHKGLTC*LSGARR
Trigger: TCTCCTTGCCCCAGACAACCAGCATGTAAGACCCTT...GTGCGCAGGTGTGAGTGTAAGTTCATGTAGGAGAGTGTATGCGTGTGCGCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp TCAGAGGCAGACTGTGAGAAAGAGCAGCGATGTGGTGGACCCCCAGCAGGGGGAGTCTTTATTGGAGCTTaGAATGTCATAGCAATTCGC +
Preference number: 4 (lower is better)
Translates to: SEADCEKEQRCGGPPAGGVFIGA*NVIAIR
Trigger: GCGAATTGCTATGACATTCCAAGCTCCAATAAAGAC...TCCCCCTGCTGGGGGTCCACCACATCGCTGCTCTTTCTCACAGTCTGCCTCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp GTCTTTATTGGAGCTTGGAATGTCATAGCAATTCGCCCTCATCAGAGGCAGACTTCTGGGTGCACCACATaGGGCTTGTCCGTTTCCCCT +
Preference number: 4 (lower is better)
Translates to: VFIGAWNVIAIRPHQRQTSGCTT*GLSVSP
Trigger: AGGGGAAACGGACAAGCCGCATGTGGTGCACCCAGA...AGTCTGCCTCTGATGAGGGCGAATTGCTATGACATTCCAAGCTCCAATAAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp GTCTTTATTGGAGCTTGGAATGTCATAGCAATTCGCCCTCATCAGAGGCAGACTCAGCAAGGGACAGGATaGTGGTCTGCGATAGCTGGG +
Preference number: 4 (lower is better)
Translates to: VFIGAWNVIAIRPHQRQTQQGTG*WSAIAG
Trigger: CCCAGCTATCGCAGACCAGCATCCTGTCCCTTGCTG...AGTCTGCCTCTGATGAGGGCGAATTGCTATGACATTCCAAGCTCCAATAAAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS-3UTR GCA 90 bp GTCTTTATTGGAGCTTGGAATGTCATAGCAATTCGCCCTCATCAGAGGCAGACTGGGTGGTGGGAGACCTaGTCACTGATGAAGCGGAAG +
Preference number: 4 (lower is better)
Translates to: VFIGAWNVIAIRPHQRQTGWWET*SLMKRK
Trigger: CTTCCGCTTCATCAGTGAGCAGGTCTCCCACCACCC...AGTCTGCCTCTGATGAGGGCGAATTGCTATGACATTCCAAGCTCCAATAAAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS-3UTR GCA 90 bp TACACTCTCCTACATGAACTTACACTCACACCTGCGCACTCGCTGCCGGTGGGTTCAGGACATTGTGAATaGAGGATGTCACCTTGTTCC +
Preference number: 4 (lower is better)
Translates to: YTLLHELTLTPAHSLPVGSGHCE*RMSPCS
Trigger: GGAACAAGGTGACATCCTGCATTCACAATGTCCTGA...ACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAGTTCATGTAGGAGAGTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS-3UTR CCA 90 bp AGCTTGGAATGTCATAGCAATTCGCCCTCATCAGAGGCAGACTGTGAGAAAGAGGTTGTCACTGAGGCCTaGTGTGTGGGGATAACAGGG +
Preference number: 4 (lower is better)
Translates to: SLECHSNSPSSEADCEKEVVTEA*CVGITG
Trigger: CCCTGTTATCCCCACACACCAGGCCTCAGTGACAAC...CTCTTTCTCACAGTCTGCCTCTGATGAGGGCGAATTGCTATGACATTCCAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp AGCTTGGAATGTCATAGCAATTCGCCCTCATCAGAGGCAGACTGTGAGAAAGAGTCGATCCTTCTCTTCTaGGCCTCAGCGGCCTGTATG +
Preference number: 4 (lower is better)
Translates to: SLECHSNSPSSEADCEKESILLF*ASAACM
Trigger: CATACAGGCCGCTGAGGCCCAGAAGAGAAGGATCGA...CTCTTTCTCACAGTCTGCCTCTGATGAGGGCGAATTGCTATGACATTCCAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp AGCTTGGAATGTCATAGCAATTCGCCCTCATCAGAGGCAGACTGTGAGAAAGAGGAAGTTCTCAGACTCTaGATGGCAGGCCGAGATAGG +
Preference number: 4 (lower is better)
Translates to: SLECHSNSPSSEADCEKEEVLRL*MAGRDR
Trigger: CCTATCTCGGCCTGCCATGCAGAGTCTGAGAACTTC...CTCTTTCTCACAGTCTGCCTCTGATGAGGGCGAATTGCTATGACATTCCAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS-3UTR CCA 90 bp GGGACAGTCTTTATTGGAGCTTGGAATGTCATAGCAATTCGCCCTCATCAGAGGACATCGATGGAGCCATaGAGCTTCCCCTTGGTGATG +
Preference number: 4 (lower is better)
Translates to: GTVFIGAWNVIAIRPHQRTSMEP*SFPLVM
Trigger: CATCACCAAGGGGAAGCTCCATGGCTCCATCGATGT...CCTCTGATGAGGGCGAATTGCTATGACATTCCAAGCTCCAATAAAGACTGTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp GTCTTTATTGGAGCTTGGAATGTCATAGCAATTCGCCCTCATCAGAGGCAGACTTCCTTGGCAAAGCTCTaGGTGCACCACATGCGGCTT +
Preference number: 4 (lower is better)
Translates to: VFIGAWNVIAIRPHQRQTSLAKL*VHHMRL
Trigger: AAGCCGCATGTGGTGCACCCAGAGCTTTGCCAAGGA...AGTCTGCCTCTGATGAGGGCGAATTGCTATGACATTCCAAGCTCCAATAAAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp GACAGTCTTTATTGGAGCTTGGAATGTCATAGCAATTCGCCCTCATCAGAGGCAGGTAGCGAGACAGGTTaGGAACAGAGCCATGGAGAC +
Preference number: 4 (lower is better)
Translates to: DSLYWSLECHSNSPSSEAGSETG*EQSHGD
Trigger: GTCTCCATGGCTCTGTTCCCAACCTGTCTCGCTACC...TGCCTCTGATGAGGGCGAATTGCTATGACATTCCAAGCTCCAATAAAGACTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp GGGACAGTCTTTATTGGAGCTTGGAATGTCATAGCAATTCGCCCTCATCAGAGGGCACCTCGTGGACATTaGAACTCCAGTACTTGGCCT +
Preference number: 4 (lower is better)
Translates to: GTVFIGAWNVIAIRPHQRAPRGH*NSSTWP
Trigger: AGGCCAAGTACTGGAGTTCCAATGTCCACGAGGTGC...CCTCTGATGAGGGCGAATTGCTATGACATTCCAAGCTCCAATAAAGACTGTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS-3UTR TCA 90 bp AGCTTGGAATGTCATAGCAATTCGCCCTCATCAGAGGCAGACTGTGAGAAAGAGTGTTGTTTTCCTCCATaGCTTTGCGCCTGTCTCGCT +
Preference number: 4 (lower is better)
Translates to: SLECHSNSPSSEADCEKECCFPP*LCACLA
Trigger: AGCGAGACAGGCGCAAAGTCATGGAGGAAAACAACA...CTCTTTCTCACAGTCTGCCTCTGATGAGGGCGAATTGCTATGACATTCCAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp GGGACAGTCTTTATTGGAGCTTGGAATGTCATAGCAATTCGCCCTCATCAGAGGGTCTTGCCGGGTTGTTaGATAATGAAGGATCCCGTC +
Preference number: 4 (lower is better)
Translates to: GTVFIGAWNVIAIRPHQRVLPGC*IMKDPV
Trigger: GACGGGATCCTTCATTATGCAACAACCCGGCAAGAC...CCTCTGATGAGGGCGAATTGCTATGACATTCCAAGCTCCAATAAAGACTGTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp GGGACAGTCTTTATTGGAGCTTGGAATGTCATAGCAATTCGCCCTCATCAGAGGATGTACAGAGCTTCTTaGTCCTCAGGGTTGAGGGAG +
Preference number: 4 (lower is better)
Translates to: GTVFIGAWNVIAIRPHQRMYRAS*SSGLRE
Trigger: CTCCCTCAACCCTGAGGAGCAAGAAGCTCTGTACAT...CCTCTGATGAGGGCGAATTGCTATGACATTCCAAGCTCCAATAAAGACTGTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS-3UTR GCA 90 bp GTCTTTATTGGAGCTTGGAATGTCATAGCAATTCGCCCTCATCAGAGGCAGACTCGACCGTTTCAGCTCTaGTGTCAGCTCATTCAGCTC +
Preference number: 4 (lower is better)
Translates to: VFIGAWNVIAIRPHQRQTRPFQL*CQLIQL
Trigger: GAGCTGAATGAGCTGACAGCAGAGCTGAAACGGTCG...AGTCTGCCTCTGATGAGGGCGAATTGCTATGACATTCCAAGCTCCAATAAAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp GACAGTCTTTATTGGAGCTTGGAATGTCATAGCAATTCGCCCTCATCAGAGGCAACATCGATGGAGCCATaGAGCTTCCCCTTGGTGATG +
Preference number: 4 (lower is better)
Translates to: DSLYWSLECHSNSPSSEATSMEP*SFPLVM
Trigger: CATCACCAAGGGGAAGCTCCATGGCTCCATCGATGT...TGCCTCTGATGAGGGCGAATTGCTATGACATTCCAAGCTCCAATAAAGACTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp GGGACAGTCTTTATTGGAGCTTGGAATGTCATAGCAATTCGCCCTCATCAGAGGTCCGTTTCCCCTTCTTaGGTCTTTCGGTTGTCACTG +
Preference number: 4 (lower is better)
Translates to: GTVFIGAWNVIAIRPHQRSVSPS*VFRLSL
Trigger: CAGTGACAACCGAAAGACCCAAGAAGGGGAAACGGA...CCTCTGATGAGGGCGAATTGCTATGACATTCCAAGCTCCAATAAAGACTGTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp TACACTCTCCTACATGAACTTACACTCACACCTGCGCACTCGCTGCCGGTGGGTGTCTTTATTGGAGCTTaGAATGTCATAGCAATTCGC +
Preference number: 4 (lower is better)
Translates to: YTLLHELTLTPAHSLPVGVFIGA*NVIAIR
Trigger: GCGAATTGCTATGACATTCCAAGCTCCAATAAAGAC...ACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAGTTCATGTAGGAGAGTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp GCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCTACATGAACTTACAGTCTTTATTGGAGCTTaGAATGTCATAGCAATTCGC +
Preference number: 4 (lower is better)
Translates to: ACKQGTGAHAYTLLHELTVFIGA*NVIAIR
Trigger: GCGAATTGCTATGACATTCCAAGCTCCAATAAAGAC...TGTAAGTTCATGTAGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CCA 90 bp GTTTTCCTCCATGACTTTGCGCCTGTCTCGCTGCAGCTGCTCGATCCTTCTCTTGTCTTTATTGGAGCTTaGAATGTCATAGCAATTCGC +
Preference number: 4 (lower is better)
Translates to: VFLHDFAPVSLQLLDPSLVFIGA*NVIAIR
Trigger: GCGAATTGCTATGACATTCCAAGCTCCAATAAAGAC...AAGAGAAGGATCGAGCAGCTGCAGCGAGACAGGCGCAAAGTCATGGAGGAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
CDS-3UTR GCA 90 bp AGCTTGGAATGTCATAGCAATTCGCCCTCATCAGAGGCAGACTGTGAGAAAGAGGCTCAGAGACTTCTCTaGCATGATCTTGCAGAAAAC +
Preference number: 4 (lower is better)
Translates to: SLECHSNSPSSEADCEKEAQRLL*HDLAEN
Trigger: GTTTTCTGCAAGATCATGGCAGAGAAGTCTCTGAGC...CTCTTTCTCACAGTCTGCCTCTGATGAGGGCGAATTGCTATGACATTCCAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579728.5
CDS-3UTR CCA 90 bp GACAGTCTTTATTGGAGCTTGGAATGTCATAGCAATTCGCCCTCATCAGAGGCACTGAAGAAGCGAGCCTaGTGTACGATGTTGTTTTCC +
Preference number: 4 (lower is better)
Translates to: DSLYWSLECHSNSPSSEALKKRA*CTMLFS
Trigger: GGAAAACAACATCGTACACCAGGCTCGCTTCTTCAG...TGCCTCTGATGAGGGCGAATTGCTATGACATTCCAAGCTCCAATAAAGACTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS CCA 90 bp GGCCAGGGCCCAGAAGCTGCGCTGCAGGTGGGCATAGTCTGTGGGTaGCAGCCCACGGGTGCCCGAGGAGTCCCGAGACTCCAGGTAGCG +
Preference number: 5 (lower is better)
Translates to: GQGPEAALQVGIVCG*QPTGARGVPRLQVA
Trigger: CGCTACCTGGAGTCTCGGGACTCCTCGGGCACCCGTGGGCTGCCACCCACAGACTATGCCCACCTGCAGCGCAGCTTCTGGGCCCTGGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000580140.5
ENST00000580808.1
ENST00000583167.5
ENST00000613735.4
CDS CCA 90 bp CTGGGCAGTGAGCCACGGGGCATGTCCAGGCGGTGGGCTAGGCGGTaGGCACGCAGCTGCGCCACCCAGCTCTGGAATAGGTCCTGGGAT +
Preference number: 5 (lower is better)
Translates to: LGSEPRGMSRRWARR*ARSCATQLWNRSWD
Trigger: ATCCCAGGACCTATTCCAGAGCTGGGTGGCGCAGCTGCGTGCCCACCGCCTAGCCCACCGCCTGGACATGCCCCGTGGCTCACTGCCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000580140.5
ENST00000584698.1
ENST00000613735.4
CDS CCA 90 bp TCTGGGCCAGGGCCCAGAAGCTGCGCTGCAGGTGGGCATAGTCTGTaGGTGGCAGCCCACGGGTGCCCGAGGAGTCCCGAGACTCCAGGT +
Preference number: 5 (lower is better)
Translates to: SGPGPRSCAAGGHSL*VAAHGCPRSPETPG
Trigger: ACCTGGAGTCTCGGGACTCCTCGGGCACCCGTGGGCTGCCACCCACAGACTATGCCCACCTGCAGCGCAGCTTCTGGGCCCTGGCCCAGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000580140.5
ENST00000580808.1
ENST00000583167.5
ENST00000613735.4
CDS TCA 90 bp GAGGGAGCTGAAAGAGTCCGCCGTGGTGTCGGAGGAGGTGGACAGTaGGTGGAGGCGCCTCTGGCCAGTGGAGGCCTCAGAGACCCCCAT +
Preference number: 5 (lower is better)
Translates to: EGAERVRRGVGGGGQ*VEAPLASGGLRDPH
Trigger: ATGGGGGTCTCTGAGGCCTCCACTGGCCAGAGGCGCCTCCACTCACTGTCCACCTCCTCCGACACCACGGCGGACTCTTTCAGCTCCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS GCA 90 bp CCACGGGGCATGTCCAGGCGGTGGGCTAGGCGGTGGGCACGCAGCTaGGCCACCCAGCTCTGGAATAGGTCCTGGGATTTGATCTTGAGG +
Preference number: 5 (lower is better)
Translates to: PRGMSRRWARRWARS*ATQLWNRSWDLILR
Trigger: CCTCAAGATCAAATCCCAGGACCTATTCCAGAGCTGGGTGGCGCAGCTGCGTGCCCACCGCCTAGCCCACCGCCTGGACATGCCCCGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000580140.5
ENST00000584698.1
ENST00000613735.4
CDS GCA 90 bp AGCTGCGCTGCAGGTGGGCATAGTCTGTGGGTGGCAGCCCACGGGTaGCCGAGGAGTCCCGAGACTCCAGGTAGCGAGACAGGTTGGGAA +
Preference number: 5 (lower is better)
Translates to: SCAAGGHSLWVAAHG*PRSPETPGSETGWE
Trigger: TTCCCAACCTGTCTCGCTACCTGGAGTCTCGGGACTCCTCGGGCACCCGTGGGCTGCCACCCACAGACTATGCCCACCTGCAGCGCAGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000580140.5
ENST00000580808.1
ENST00000583167.5
ENST00000613735.4
CDS-3UTR CAA 90 bp TTTGCGCCTGTCTCGCTGCAGCTGCTCGATCCTTCTCTTCTGGGCCTCAGCGGCGGACGCCAGTACTCCTaGGCCCTTGCGCCGCTCTGC +
Preference number: 5 (lower is better)
Translates to: FAPVSLQLLDPSLLGLSGGRQYS*ALAPLC
Trigger: GCAGAGCGGCGCAAGGGCCAAGGAGTACTGGCGTCC...GCCGCTGAGGCCCAGAAGAGAAGGATCGAGCAGCTGCAGCGAGACAGGCGCAAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613735.4
CDS TCA 90 bp GGGCTGAAGGGGCCGGCCTCCTTAGAGCATCCTGCCCCAGCTACGTaGGGTGCATGCCCGACCTCACCCGTCCAATGGTGTCATCCTTGG +
Preference number: 5 (lower is better)
Translates to: GLKGPASLEHPAPAT*GACPTSPVQWCHPW
Trigger: CCAAGGATGACACCATTGGACGGGTGAGGTCGGGCATGCACCTCACGTAGCTGGGGCAGGATGCTCTAAGGAGGCCGGCCCCTTCAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583167.5
CDS CCA 90 bp CTGCTCTGGTCGATTCCAGATACCCCATGCCTGCCCAGGGCATACTaGGGCCAGACTCCTCCCACAACCCCAAGCCACTGCCCGGGCTCA +
Preference number: 5 (lower is better)
Translates to: LLWSIPDTPCLPRAY*GQTPPTTPSHCPGS
Trigger: TGAGCCCGGGCAGTGGCTTGGGGTTGTGGGAGGAGTCTGGCCCCAGTATGCCCTGGGCAGGCATGGGGTATCTGGAATCGACCAGAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580226.5
CDS CCA 90 bp CCCTGTCCCCCAGGCCTCACCCCCATTCTTGACAACTCTGAGCCCTaGTGCATGTCCCTCAGTTGGTCCCGTTCCATGGTGAGGGCGGCC +
Preference number: 5 (lower is better)
Translates to: PCPPGLTPILDNSEP*CMSLSWSRSMVRAA
Trigger: GGCCGCCCTCACCATGGAACGGGACCAACTGAGGGACATGCACCAGGGCTCAGAGTTGTCAAGAATGGGGGTGAGGCCTGGGGGACAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000580140.5
ENST00000580808.1
ENST00000583167.5
ENST00000613735.4
CDS-3UTR CAA 90 bp AGGGAGCCCTGCTTGCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCGGGCGGGTCCCTCTCTaGGAAGTCCATGGAGAAGGG +
Preference number: 5 (lower is better)
Translates to: REPCLPASRAQAHTHTLSGRVPL*EVHGEG
Trigger: CCCTTCTCCATGGACTTCCAAGAGAGGGACCCGCCC...GGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGCAAGCAGGGCTCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CAA 90 bp GGCCTCAGCGGCCTGTATGTTCCCCTCCTCCAGGTACCTCTGGTCTGGCCGGAGACGGGAGGGAACCGCTaGAGGATCAGGGACGAAGGA +
Preference number: 5 (lower is better)
Translates to: GLSGLYVPLLQVPLVWPETGGNR*RIRDEG
Trigger: TCCTTCGTCCCTGATCCTCAAGCGGTTCCCTCCCGT...CTCCGGCCAGACCAGAGGTACCTGGAGGAGGGGAACATACAGGCCGCTGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CAA 90 bp GCAGACTGTGAGAAAGAGCAGCGATGTGGTGGACCCCCAGCAGGGGGAAGGCGGCAGAGGACAGGTGCCTaGGGCTGCTCCCCTCCTCAT +
Preference number: 5 (lower is better)
Translates to: ADCEKEQRCGGPPAGGRRQRTGA*GCSPPH
Trigger: ATGAGGAGGGGAGCAGCCCAAGGCACCTGTCCTCTG...CCGCCTTCCCCCTGCTGGGGGTCCACCACATCGCTGCTCTTTCTCACAGTCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS GCA 90 bp TGTCCCCCAGGCCTCACCCCCATTCTTGACAACTCTGAGCCCTGGTaGATGTCCCTCAGTTGGTCCCGTTCCATGGTGAGGGCGGCCAGG +
Preference number: 5 (lower is better)
Translates to: CPPGLTPILDNSEPW*MSLSWSRSMVRAAR
Trigger: CCTGGCCGCCCTCACCATGGAACGGGACCAACTGAGGGACATGCACCAGGGCTCAGAGTTGTCAAGAATGGGGGTGAGGCCTGGGGGACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000580140.5
ENST00000580808.1
ENST00000583167.5
ENST00000613735.4
CDS CCA 90 bp GAGCGCTCTCAGGCAGGAAGGGCGGGTCCCTCTCTTGGAAGTCCATaGAGAAGGGAGAGGCCACTCCCTGCTGGGGATGTAGAGCAGGGA +
Preference number: 5 (lower is better)
Translates to: ERSQAGRAGPSLGSP*RRERPLPAGDVEQG
Trigger: TCCCTGCTCTACATCCCCAGCAGGGAGTGGCCTCTCCCTTCTCCATGGACTTCCAAGAGAGGGACCCGCCCTTCCTGCCTGAGAGCGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000580140.5
ENST00000580226.5
ENST00000585051.1
ENST00000613735.4
CDS CCA 90 bp TCCGCCGTGGTGTCGGAGGAGGTGGACAGTGAGTGGAGGCGCCTCTaGCCAGTGGAGGCCTCAGAGACCCCCATTCTTGACAACTCTGAG +
Preference number: 5 (lower is better)
Translates to: SAVVSEEVDSEWRRL*PVEASETPILDNSE
Trigger: CTCAGAGTTGTCAAGAATGGGGGTCTCTGAGGCCTCCACTGGCCAGAGGCGCCTCCACTCACTGTCCACCTCCTCCGACACCACGGCGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS CCA 90 bp GAGCTGAAAGAGTCCGCCGTGGTGTCGGAGGAGGTGGACAGTGAGTaGAGGCGCCTCTGGCCAGTGGAGGCCTCAGAGACCCCCATTCTT +
Preference number: 5 (lower is better)
Translates to: ELKESAVVSEEVDSE*RRLWPVEASETPIL
Trigger: AAGAATGGGGGTCTCTGAGGCCTCCACTGGCCAGAGGCGCCTCCACTCACTGTCCACCTCCTCCGACACCACGGCGGACTCTTTCAGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS-3UTR CAA 90 bp CTTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGACAGGTGCCTTGGGGCGGGTCCCTCTCTaGGAAGTCCATGGAGAAGGG +
Preference number: 5 (lower is better)
Translates to: LTLTPAHSLPVGQRTGALGRVPL*EVHGEG
Trigger: CCCTTCTCCATGGACTTCCAAGAGAGGGACCCGCCC...CAAGGCACCTGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CAA 90 bp GGCCTCAGCGGCCTGTATGTTCCCCTCCTCCAGGTACCTCTGGTCTGGCCGGAGCCATGGAGCTTCCCCTaGGTGATGTCTTGCCGGGTT +
Preference number: 5 (lower is better)
Translates to: GLSGLYVPLLQVPLVWPEPWSFP*VMSCRV
Trigger: AACCCGGCAAGACATCACCAAGGGGAAGCTCCATGG...CTCCGGCCAGACCAGAGGTACCTGGAGGAGGGGAACATACAGGCCGCTGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CAA 90 bp GCAGACTGTGAGAAAGAGCAGCGATGTGGTGGACCCCCAGCAGGGGGAAGGCGGCTGGGCAGGCTGACGTaGACTGTTCCCACAGGCACA +
Preference number: 5 (lower is better)
Translates to: ADCEKEQRCGGPPAGGRRLGRLT*TVPTGT
Trigger: TGTGCCTGTGGGAACAGTCAACGTCAGCCTGCCCAG...CCGCCTTCCCCCTGCTGGGGGTCCACCACATCGCTGCTCTTTCTCACAGTCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS-3UTR CAA 90 bp AGGGAGCCCTGCTTGCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCACGGGAGGGAACCGCTaGAGGATCAGGGACGAAGGA +
Preference number: 5 (lower is better)
Translates to: REPCLPASRAQAHTHTLSTGGNR*RIRDEG
Trigger: TCCTTCGTCCCTGATCCTCAAGCGGTTCCCTCCCGT...GGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGCAAGCAGGGCTCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CAA 90 bp GCAGCTGCTCGATCCTTCTCTTCTGGGCCTCAGCGGCCTGTATGTTCCCCTCCTATGCCCAGCCCCGCCTaGGGCACATACTCTGGGGCT +
Preference number: 5 (lower is better)
Translates to: AAARSFSSGPQRPVCSPPMPSPA*GTYSGA
Trigger: AGCCCCAGAGTATGTGCCCAAGGCGGGGCTGGGCAT...AGGAGGGGAACATACAGGCCGCTGAGGCCCAGAAGAGAAGGATCGAGCAGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000579728.5
CDS GCA 90 bp GTGGAGGCCTCAGAGACCCCCATTCTTGACAACTCTGAGCCCTGGTaGATGTCCCTCAGTTGGTCCCGTTCCATGGTGAGGGCGGCCAGG +
Preference number: 5 (lower is better)
Translates to: VEASETPILDNSEPW*MSLSWSRSMVRAAR
Trigger: CCTGGCCGCCCTCACCATGGAACGGGACCAACTGAGGGACATGCACCAGGGCTCAGAGTTGTCAAGAATGGGGGTCTCTGAGGCCTCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS GCA 90 bp CCCAGGGCATACTGGGGCCAGACTCCTCCCACAACCCCAAGCCACTaGCCGGGCTCACGTCTTGCCGGGTTGTTGCATAATGAAGGATCC +
Preference number: 5 (lower is better)
Translates to: PRAYWGQTPPTTPSH*PGSRLAGLLHNEGS
Trigger: GGATCCTTCATTATGCAACAACCCGGCAAGACGTGAGCCCGGGCAGTGGCTTGGGGTTGTGGGAGGAGTCTGGCCCCAGTATGCCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580226.5
CDS GCA 90 bp GAAGGGGCCGGCCTCCTTAGAGCATCCTGCCCCAGCTACGTGAGGTaGATGCCCGACCTCACCCGTCCAATGGTGTCATCCTTGGCAAAG +
Preference number: 5 (lower is better)
Translates to: EGAGLLRASCPSYVR*MPDLTRPMVSSLAK
Trigger: CTTTGCCAAGGATGACACCATTGGACGGGTGAGGTCGGGCATGCACCTCACGTAGCTGGGGCAGGATGCTCTAAGGAGGCCGGCCCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583167.5
CDS CCA 90 bp ACCCCCATTCTTGACAACTCTGAGCCCTGGTGCATGTCCCTCAGTTaGTCCCGTTCCATGGTGAGGGCGGCCAGGACGCTGCTGAGGGAG +
Preference number: 5 (lower is better)
Translates to: TPILDNSEPWCMSLS*SRSMVRAARTLLRE
Trigger: CTCCCTCAGCAGCGTCCTGGCCGCCCTCACCATGGAACGGGACCAACTGAGGGACATGCACCAGGGCTCAGAGTTGTCAAGAATGGGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000580140.5
ENST00000580808.1
ENST00000583167.5
ENST00000613735.4
CDS CCA 90 bp CCAGTGGAGGCCTCAGAGACCCCCATTCTTGACAACTCTGAGCCCTaGTGCATGTCCCTCAGTTGGTCCCGTTCCATGGTGAGGGCGGCC +
Preference number: 5 (lower is better)
Translates to: PVEASETPILDNSEP*CMSLSWSRSMVRAA
Trigger: GGCCGCCCTCACCATGGAACGGGACCAACTGAGGGACATGCACCAGGGCTCAGAGTTGTCAAGAATGGGGGTCTCTGAGGCCTCCACTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS-3UTR CAA 90 bp GACAGGAGGGATGGCCAGGGACTAACCAAAGGGAGCTGGAGAAGGCCCTGCAGGGAGCACTGCTGGGCTTaGAGGACTGAGCGCTCTCAG +
Preference number: 5 (lower is better)
Translates to: DRRDGQGLTKGSWRRPCREHCWA*RTERSQ
Trigger: CTGAGAGCGCTCAGTCCTCAAAGCCCAGCAGTGCTC...CCTGCAGGGCCTTCTCCAGCTCCCTTTGGTTAGTCCCTGGCCATCCCTCCTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CAA 90 bp GAGGGAGCCCTGCTTGCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCGTGCATGTCCCTCAGTaGGTCCCGTTCCATGGTGAG +
Preference number: 5 (lower is better)
Translates to: EGALLACKQGTGAHAYTLVHVPQ*VPFHGE
Trigger: CTCACCATGGAACGGGACCAACTGAGGGACATGCAC...GAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGCAAGCAGGGCTCCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CAA 90 bp GAGGCAGACTGTGAGAAAGAGCAGCGATGTGGTGGACCCCCAGCAGGGGGAAGGACAGGGTTGAAGGGCTaGCAGCCGGCTCGGTGGTAT +
Preference number: 5 (lower is better)
Translates to: EADCEKEQRCGGPPAGGRTGLKG*QPARWY
Trigger: ATACCACCGAGCCGGCTGCAAGCCCTTCAACCCTGT...CCTTCCCCCTGCTGGGGGTCCACCACATCGCTGCTCTTTCTCACAGTCTGCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS-3UTR CAA 90 bp GGGGAGGGAGAACAGATCACCTCCTCTCCTTCACTCACTGCAACCTCACCGCTGTCCCCCAGGACAGGGTaGAAGGGCTTGCAGCCGGCT +
Preference number: 5 (lower is better)
Translates to: GEGEQITSSPSLTATSPLSPRTG*KGLQPA
Trigger: AGCCGGCTGCAAGCCCTTCAACCCTGTCCTGGGGGA...CAGCGGTGAGGTTGCAGTGAGTGAAGGAGAGGAGGTGATCTGTTCTCCCTCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000007414.8
ENST00000579728.5
CDS TCA 90 bp CGAGACAGGTTGGGAACAGAGCCATGGAGACGACCAACCTGTAGGTaGAGGGGAAGGGCTGAAGGGGCCGGCCTCCTTAGAGCATCCTGC +
Preference number: 5 (lower is better)
Translates to: RDRLGTEPWRRPTCR*RGRAEGAGLLRASC
Trigger: GCAGGATGCTCTAAGGAGGCCGGCCCCTTCAGCCCTTCCCCTTCACCTACAGGTTGGTCGTCTCCATGGCTCTGTTCCCAACCTGTCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583167.5
CDS CCA 90 bp CACGGGTGCCCGAGGAGTCCCGAGACTCCAGGTAGCGAGACAGGTTaGGAACAGAGCCATGGAGACGACCAACCCGTCCAATGGTGTCAT +
Preference number: 5 (lower is better)
Translates to: HGCPRSPETPGSETG*EQSHGDDQPVQWCH
Trigger: ATGACACCATTGGACGGGTTGGTCGTCTCCATGGCTCTGTTCCCAACCTGTCTCGCTACCTGGAGTCTCGGGACTCCTCGGGCACCCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000580140.5
ENST00000580808.1
ENST00000584698.1
ENST00000613735.4
CDS CCA 90 bp GAGCTGGCGGAGAGGAGAACCTCGCAGGCATCGAAGAACTCCGTGTaGGAATCAGCAAGGGACAGGATGCTGGTCTGCGATAGCTGGGGG +
Preference number: 5 (lower is better)
Translates to: ELAERRTSQASKNSV*ESARDRMLVCDSWG
Trigger: CCCCCAGCTATCGCAGACCAGCATCCTGTCCCTTGCTGATTCCCACACGGAGTTCTTCGATGCCTGCGAGGTTCTCCTCTCCGCCAGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000583167.5
CDS CCA 90 bp CACGGGTGCCCGAGGAGTCCCGAGACTCCAGGTAGCGAGACAGGTTaGGAACAGAGCCATGGAGACGACCAACCTGTAGGTGAAGGGGAA +
Preference number: 5 (lower is better)
Translates to: HGCPRSPETPGSETG*EQSHGDDQPVGEGE
Trigger: TTCCCCTTCACCTACAGGTTGGTCGTCTCCATGGCTCTGTTCCCAACCTGTCTCGCTACCTGGAGTCTCGGGACTCCTCGGGCACCCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583167.5
CDS-3UTR CAA 90 bp AACTTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGACAGGTGCCTGAGCACTGCTGGGCTTaGAGGACTGAGCGCTCTCAG +
Preference number: 5 (lower is better)
Translates to: NLHSHLRTRCRWVRGQVPEHCWA*RTERSQ
Trigger: CTGAGAGCGCTCAGTCCTCAAAGCCCAGCAGTGCTC...AGGCACCTGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CAA 90 bp GGCATTGAGTTGGGTTTCCAGATGCACTGGCCACCTGGCGTGGGTCCCCGGTACCCATGGAGCTTCCCCTaGGTGATGTCTTGCCGGGTT +
Preference number: 5 (lower is better)
Translates to: GIELGFQMHWPPGVGPRYPWSFP*VMSCRV
Trigger: AACCCGGCAAGACATCACCAAGGGGAAGCTCCATGG...GTACCGGGGACCCACGCCAGGTGGCCAGTGCATCTGGAAACCCAACTCAATGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CAA 90 bp GGGAGCCCTGCTTGCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCTCGCTGGGCCTTTTTGTaGATGGACATGACCGACAGC +
Preference number: 5 (lower is better)
Translates to: GSPACLQAGHRRTRIHSPRWAFL*MDMTDS
Trigger: GCTGTCGGTCATGTCCATCAACAAAAAGGCCCAGCG...AGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGCAAGCAGGGCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CAA 90 bp TCTGGTCTGGCCGGAGTCTCGTGTCGGTGGAAGGCAGCGACCGTTTCAGCTCTGTGCACCACATGCGGCTaGTCCGTTTCCCCTTCTTGG +
Preference number: 5 (lower is better)
Translates to: SGLAGVSCRWKAATVSALCTTCG*SVSPSW
Trigger: CCAAGAAGGGGAAACGGACAAGCCGCATGTGGTGCA...CAGAGCTGAAACGGTCGCTGCCTTCCACCGACACGAGACTCCGGCCAGACCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CAA 90 bp GCAGACTGTGAGAAAGAGCAGCGATGTGGTGGACCCCCAGCAGGGGGAAGGCGGCCAATGGTGTCATCCTaGGCAAAGCTCTGGGTGCAC +
Preference number: 5 (lower is better)
Translates to: ADCEKEQRCGGPPAGGRRPMVSS*AKLWVH
Trigger: GTGCACCCAGAGCTTTGCCAAGGATGACACCATTGG...CCGCCTTCCCCCTGCTGGGGGTCCACCACATCGCTGCTCTTTCTCACAGTCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CAA 90 bp GAGGGAGCCCTGCTTGCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCCAATGGTGTCATCCTaGGCAAAGCTCTGGGTGCAC +
Preference number: 5 (lower is better)
Translates to: EGALLACKQGTGAHAYTLPMVSS*AKLWVH
Trigger: GTGCACCCAGAGCTTTGCCAAGGATGACACCATTGG...GAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGCAAGCAGGGCTCCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CAA 90 bp TCCTCCATGACTTTGCGCCTGTCTCGCTGCAGCTGCTCGATCCTTCTCTTCTGGTCCCCCAGGACAGGGTaGAAGGGCTTGCAGCCGGCT +
Preference number: 5 (lower is better)
Translates to: SSMTLRLSRCSCSILLFWSPRTG*KGLQPA
Trigger: AGCCGGCTGCAAGCCCTTCAACCCTGTCCTGGGGGA...CCAGAAGAGAAGGATCGAGCAGCTGCAGCGAGACAGGCGCAAAGTCATGGAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579728.5
CDS-3UTR CAA 90 bp CTTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGACAGGTGCCTTGCCGGTACAGAGCTTCTaGCTCCTCAGGGTTGAGGGA +
Preference number: 5 (lower is better)
Translates to: LTLTPAHSLPVGQRTGALPVQSF*LLRVEG
Trigger: TCCCTCAACCCTGAGGAGCAAGAAGCTCTGTACCGG...CAAGGCACCTGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613735.4
CDS CCA 90 bp TCCGTGTGGGAATCAGCAAGGGACAGGATGCTGGTCTGCGATAGCTaGGGGGTGAGCTCGCGCCCCTTCATGTACAGAGCTTCTTGCTCC +
Preference number: 5 (lower is better)
Translates to: SVWESARDRMLVCDS*GVSSRPFMYRASCS
Trigger: GGAGCAAGAAGCTCTGTACATGAAGGGGCGCGAGCTCACCCCCCAGCTATCGCAGACCAGCATCCTGTCCCTTGCTGATTCCCACACGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS CCA 90 bp GGGGTCTGCAGGGTTGTGGAAGGCAACACCCTCCCAGAGAGATCCTaGGTACCCAGGCCTTCAGTTCCTTGTTCCCAGCCTGAGAATGGG +
Preference number: 5 (lower is better)
Translates to: GVCRVVEGNTLPERS*VPRPSVPCSQPENG
Trigger: CCCATTCTCAGGCTGGGAACAAGGAACTGAAGGCCTGGGTACCCAGGATCTCTCTGGGAGGGTGTTGCCTTCCACAACCCTGCAGACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580226.5
CDS-3UTR CAA 90 bp TACATGCTGGTTGTCTGGGGCAAGGAGACTGGGGAAGCACAGATTCTGCTTCTCGGACGCCAGTACTCCTaGGCCCTTGCGCCGCTCTGC +
Preference number: 5 (lower is better)
Translates to: YMLVVWGKETGEAQILLLGRQYS*ALAPLC
Trigger: GCAGAGCGGCGCAAGGGCCAAGGAGTACTGGCGTCC...GAGAAGCAGAATCTGTGCTTCCCCAGTCTCCTTGCCCCAGACAACCAGCATGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000007414.8
ENST00000613735.4
CDS-3UTR CAA 90 bp GAGGGAGCCCTGCTTGCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCAGCACAAAGTATCTCTaGTGCCAGCCCTTCAGAGGC +
Preference number: 5 (lower is better)
Translates to: EGALLACKQGTGAHAYTLSTKYL*CQPFRG
Trigger: GCCTCTGAAGGGCTGGCACAAGAGATACTTTGTGCT...GAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGCAAGCAGGGCTCCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CAA 90 bp GGCATTGAGTTGGGTTTCCAGATGCACTGGCCACCTGGCGTGGGTCCCCGGTACCGCTGGGCCTTTTTGTaGATGGACATGACCGACAGC +
Preference number: 5 (lower is better)
Translates to: GIELGFQMHWPPGVGPRYRWAFL*MDMTDS
Trigger: GCTGTCGGTCATGTCCATCAACAAAAAGGCCCAGCG...GTACCGGGGACCCACGCCAGGTGGCCAGTGCATCTGGAAACCCAACTCAATGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CAA 90 bp GGGAGCCCTGCTTGCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCTATGCGCTGGGCCTTTTaGTTGATGGACATGACCGAC +
Preference number: 5 (lower is better)
Translates to: GSPACLQAGHRRTRIHSPMRWAF*LMDMTD
Trigger: GTCGGTCATGTCCATCAACAAAAAGGCCCAGCGCAT...AGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGCAAGCAGGGCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CAA 90 bp AGGGAGCCCTGCTTGCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCATGCGCTGGGCCTTTTaGTTGATGGACATGACCGAC +
Preference number: 5 (lower is better)
Translates to: REPCLPASRAQAHTHTLSMRWAF*LMDMTD
Trigger: GTCGGTCATGTCCATCAACAAAAAGGCCCAGCGCAT...GGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGCAAGCAGGGCTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CAA 90 bp GAGGCAGACTGTGAGAAAGAGCAGCGATGTGGTGGACCCCCAGCAGGGGGAAGGTCTTGGGTCTTTCGGTaGTCACTGAGGCCTGGTGTG +
Preference number: 5 (lower is better)
Translates to: EADCEKEQRCGGPPAGGRSWVFR*SLRPGV
Trigger: CACACCAGGCCTCAGTGACAACCGAAAGACCCAAGA...CCTTCCCCCTGCTGGGGGTCCACCACATCGCTGCTCTTTCTCACAGTCTGCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CAA 90 bp TTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGACAGGTGCCTTGGCCAATGGTGTCATCCTaGGCAAAGCTCTGGGTGCAC +
Preference number: 5 (lower is better)
Translates to: LHSHLRTRCRWVRGQVPWPMVSS*AKLWVH
Trigger: GTGCACCCAGAGCTTTGCCAAGGATGACACCATTGG...CCAAGGCACCTGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CAA 90 bp CAGACTGTGAGAAAGAGCAGCGATGTGGTGGACCCCCAGCAGGGGGAAGGCGGGCATGTACAGAGCTTCTaGCTCCTCAGGGTTGAGGGA +
Preference number: 5 (lower is better)
Translates to: QTVRKSSDVVDPQQGEGGHVQSF*LLRVEG
Trigger: TCCCTCAACCCTGAGGAGCAAGAAGCTCTGTACATG...CCCGCCTTCCCCCTGCTGGGGGTCCACCACATCGCTGCTCTTTCTCACAGTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS-3UTR CAA 90 bp TTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGACAGGTGCCTTGGTTGCAGAAGGTGATCTaGCAGTGGCAGGAGCTGTCC +
Preference number: 5 (lower is better)
Translates to: LHSHLRTRCRWVRGQVPWLQKVI*QWQELS
Trigger: GGACAGCTCCTGCCACTGCAAGATCACCTTCTGCAA...CCAAGGCACCTGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS-3UTR CAA 90 bp GACAGGAGGGATGGCCAGGGACTAACCAAAGGGAGCTGGAGAAGGCCCTGCAGGTTTTCCTCCATGACTTaGCGCCTGTCTCGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: DRRDGQGLTKGSWRRPCRFSSMT*RLSRCS
Trigger: GCTGCAGCGAGACAGGCGCAAAGTCATGGAGGAAAA...CCTGCAGGGCCTTCTCCAGCTCCCTTTGGTTAGTCCCTGGCCATCCCTCCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CAA 90 bp GGTACCTCTGGTCTGGCCGGAGTCTCGTGTCGGTGGAAGGCAGCGACCGTTTCATTTTCCTCCATGACTTaGCGCCTGTCTCGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: GTSGLAGVSCRWKAATVSFSSMT*RLSRCS
Trigger: GCTGCAGCGAGACAGGCGCAAAGTCATGGAGGAAAA...TGAAACGGTCGCTGCCTTCCACCGACACGAGACTCCGGCCAGACCAGAGGTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578461.1
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CAA 90 bp AGGGGAGGGAGAACAGATCACCTCCTCTCCTTCACTCACTGCAACCTCACCGCTCAGAGGACAGGTGCCTaGGGCTGCTCCCCTCCTCAT +
Preference number: 5 (lower is better)
Translates to: RGGRTDHLLSFTHCNLTAQRTGA*GCSPPH
Trigger: ATGAGGAGGGGAGCAGCCCAAGGCACCTGTCCTCTG...AGCGGTGAGGTTGCAGTGAGTGAAGGAGAGGAGGTGATCTGTTCTCCCTCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CAA 90 bp CTACATGAACTTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGACACAGAGGACAGGTGCCTaGGGCTGCTCCCCTCCTCAT +
Preference number: 5 (lower is better)
Translates to: LHELTLTPAHSLPVGQRTQRTGA*GCSPPH
Trigger: ATGAGGAGGGGAGCAGCCCAAGGCACCTGTCCTCTG...TGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAGTTCATGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS GCA 90 bp CCGACCTCACCCGTCCAATGGTGTCATCCTTGGCAAAGCTCTGGGTaGACCACATGCGGCTTGTCCGTTTCCCCTTCTTGGGTCTTTCGG +
Preference number: 5 (lower is better)
Translates to: PTSPVQWCHPWQSSG*TTCGLSVSPSWVFR
Trigger: CCGAAAGACCCAAGAAGGGGAAACGGACAAGCCGCATGTGGTGCACCCAGAGCTTTGCCAAGGATGACACCATTGGACGGGTGAGGTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583167.5
CDS CCA 90 bp TCCGTGTGGGAATCAGCAAGGGACAGGATGCTGGTCTGCGATAGCTaGGGGGTGAGCTCGCGCCCCTTCATGTACAGAGCTTCTTGCTGT +
Preference number: 5 (lower is better)
Translates to: SVWESARDRMLVCDS*GVSSRPFMYRASCC
Trigger: ACAGCAAGAAGCTCTGTACATGAAGGGGCGCGAGCTCACCCCCCAGCTATCGCAGACCAGCATCCTGTCCCTTGCTGATTCCCACACGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583167.5
CDS-3UTR CAA 90 bp GAGCCCTGCTTGCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCTACAGCACAAAGTATCTCTaGTGCCAGCCCTTCAGAGGC +
Preference number: 5 (lower is better)
Translates to: EPCLPASRAQAHTHTLSYSTKYL*CQPFRG
Trigger: GCCTCTGAAGGGCTGGCACAAGAGATACTTTGTGCT...GTAGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGCAAGCAGGGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CAA 90 bp GCACAGAAAGCCTGGGGAGCGTCAAGGAGTCCCCTGTGTCCTAGGAAGGCACTGCCAATGGTGTCATCCTaGGCAAAGCTCTGGGTGCAC +
Preference number: 5 (lower is better)
Translates to: AQKAWGASRSPLCPRKALPMVSS*AKLWVH
Trigger: GTGCACCCAGAGCTTTGCCAAGGATGACACCATTGG...CAGTGCCTTCCTAGGACACAGGGGACTCCTTGACGCTCCCCAGGCTTTCTGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CAA 90 bp GGAGCCCTGCTTGCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCTACATGTACAGAGCTTCTaGCTCCTCAGGGTTGAGGGA +
Preference number: 5 (lower is better)
Translates to: GALLACKQGTGAHAYTLLHVQSF*LLRVEG
Trigger: TCCCTCAACCCTGAGGAGCAAGAAGCTCTGTACATG...TAGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGCAAGCAGGGCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS-3UTR CAA 90 bp ACTGATGAAGCGGAAGCCTCGGTCAGGCCGCTCACACTCGTAGGTCTCCCCCAGCTCCAGTACTTGGCCTaGCAGAAGGTGATCTTGCAG +
Preference number: 5 (lower is better)
Translates to: TDEAEASVRPLTLVGLPQLQYLA*QKVILQ
Trigger: CTGCAAGATCACCTTCTGCAAGGCCAAGTACTGGAG...CTGGGGGAGACCTACGAGTGTGAGCGGCCTGACCGAGGCTTCCGCTTCATCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579728.5
CDS-3UTR CAA 90 bp TCCTCCATGACTTTGCGCCTGTCTCGCTGCAGCTGCTCGATCCTTCTCTTCTGGACGGGAGGGAACCGCTaGAGGATCAGGGACGAAGGA +
Preference number: 5 (lower is better)
Translates to: SSMTLRLSRCSCSILLFWTGGNR*RIRDEG
Trigger: TCCTTCGTCCCTGATCCTCAAGCGGTTCCCTCCCGT...CCAGAAGAGAAGGATCGAGCAGCTGCAGCGAGACAGGCGCAAAGTCATGGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CAA 90 bp CCCAAAGGGGACAGGAATCGGAATGGTGAAGCGGGAAGGGTCTTACATGCTGGTCAGAGGACAGGTGCCTaGGGCTGCTCCCCTCCTCAT +
Preference number: 5 (lower is better)
Translates to: PKGDRNRNGEAGRVLHAGQRTGA*GCSPPH
Trigger: ATGAGGAGGGGAGCAGCCCAAGGCACCTGTCCTCTG...ACCAGCATGTAAGACCCTTCCCGCTTCACCATTCCGATTCCTGTCCCCTTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS GCA 90 bp GACGACCAACCCGTCCAATGGTGTCATCCTTGGCAAAGCTCTGGGTaGACCACATGCGGCTTGTCCGTTTCCCCTTCTTGGGTCTTTCGG +
Preference number: 5 (lower is better)
Translates to: DDQPVQWCHPWQSSG*TTCGLSVSPSWVFR
Trigger: CCGAAAGACCCAAGAAGGGGAAACGGACAAGCCGCATGTGGTGCACCCAGAGCTTTGCCAAGGATGACACCATTGGACGGGTTGGTCGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000580140.5
ENST00000580808.1
ENST00000584698.1
ENST00000613735.4
CDS GCA 90 bp TGGCCGGAGTCTCGTGTCGGTGGAAGGCAGCGACCGTTTCAGCTCTaGTGTCAGCTCATTCAGCTCCAAGGCAAATGGGTTTCCAGATGC +
Preference number: 5 (lower is better)
Translates to: WPESRVGGRQRPFQL*CQLIQLQGKWVSRC
Trigger: GCATCTGGAAACCCATTTGCCTTGGAGCTGAATGAGCTGACAGCAGAGCTGAAACGGTCGCTGCCTTCCACCGACACGAGACTCCGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578461.1
CDS CCA 90 bp ATCACACATTCAGCAAGTGGTGGACCTGGGATTCAGACCCTGCTCTaGTCGATTCCAGATACCCCATGCCTGCCCAGGGCATACTGGGGC +
Preference number: 5 (lower is better)
Translates to: ITHSASGGPGIQTLL*SIPDTPCLPRAYWG
Trigger: GCCCCAGTATGCCCTGGGCAGGCATGGGGTATCTGGAATCGACCAGAGCAGGGTCTGAATCCCAGGTCCACCACTTGCTGAATGTGTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580226.5
CDS CCA 90 bp ATGCCCGACCTCACCCGTCCAATGGTGTCATCCTTGGCAAAGCTCTaGGTGCACCACATGCGGCTTGTCCGTTTCCCCTTCTTGGGTCTT +
Preference number: 5 (lower is better)
Translates to: MPDLTRPMVSSLAKL*VHHMRLVRFPFLGL
Trigger: AAGACCCAAGAAGGGGAAACGGACAAGCCGCATGTGGTGCACCCAGAGCTTTGCCAAGGATGACACCATTGGACGGGTGAGGTCGGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583167.5
CDS-3UTR CAA 90 bp TTGAGGGAGCTGAAAGAGTCCGCCGTGGTGTCGGAGGAGGTGGACAGTGAGTGGCCCCTTGGTGATGTCTaGCCGGGTTGTTGCATAATG +
Preference number: 5 (lower is better)
Translates to: LRELKESAVVSEEVDSEWPLGDV*PGCCIM
Trigger: CATTATGCAACAACCCGGCAAGACATCACCAAGGGG...CCACTCACTGTCCACCTCCTCCGACACCACGGCGGACTCTTTCAGCTCCCTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613735.4
CDS-3UTR CAA 90 bp GCACAGAAAGCCTGGGGAGCGTCAAGGAGTCCCCTGTGTCCTAGGAAGGCACTGATGCGCTGGGCCTTTTaGTTGATGGACATGACCGAC +
Preference number: 5 (lower is better)
Translates to: AQKAWGASRSPLCPRKALMRWAF*LMDMTD
Trigger: GTCGGTCATGTCCATCAACAAAAAGGCCCAGCGCAT...CAGTGCCTTCCTAGGACACAGGGGACTCCTTGACGCTCCCCAGGCTTTCTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CAA 90 bp TTGGTCACCCACCACTCTTTCCCGCTGCTATCCGTCTGCCGCCTGAAGAAGCGATCTTGGGTCTTTCGGTaGTCACTGAGGCCTGGTGTG +
Preference number: 5 (lower is better)
Translates to: LVTHHSFPLLSVCRLKKRSWVFR*SLRPGV
Trigger: CACACCAGGCCTCAGTGACAACCGAAAGACCCAAGA...TCGCTTCTTCAGGCGGCAGACGGATAGCAGCGGGAAAGAGTGGTGGGTGACCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CAA 90 bp AACTTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGACAGGTGCCTGTCCGTTTCCCCTTCTaGGGTCTTTCGGTTGTCACT +
Preference number: 5 (lower is better)
Translates to: NLHSHLRTRCRWVRGQVPVRFPF*GLSVVT
Trigger: AGTGACAACCGAAAGACCCAAGAAGGGGAAACGGAC...AGGCACCTGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CAA 90 bp CGGAATGGTGAAGCGGGAAGGGTCTTACATGCTGGTTGTCTGGGGCAAGGAGACTGCACCACATGCGGCTaGTCCGTTTCCCCTTCTTGG +
Preference number: 5 (lower is better)
Translates to: RNGEAGRVLHAGCLGQGDCTTCG*SVSPSW
Trigger: CCAAGAAGGGGAAACGGACAAGCCGCATGTGGTGCA...GTCTCCTTGCCCCAGACAACCAGCATGTAAGACCCTTCCCGCTTCACCATTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CAA 90 bp CCAGTAGGTATTGTTGGTCACCCACCACTCTTTCCCGCTGCTATCCGTCTGCCGGTGCATGTCCCTCAGTaGGTCCCGTTCCATGGTGAG +
Preference number: 5 (lower is better)
Translates to: PVGIVGHPPLFPAAIRLPVHVPQ*VPFHGE
Trigger: CTCACCATGGAACGGGACCAACTGAGGGACATGCAC...CGGCAGACGGATAGCAGCGGGAAAGAGTGGTGGGTGACCAACAATACCTACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CAA 90 bp TTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGACAGGTGCCTTGGAGGTCTTTGCCGATGTaGTTGCGCAGAATGTTCCAC +
Preference number: 5 (lower is better)
Translates to: LHSHLRTRCRWVRGQVPWRSLPM*LRRMFH
Trigger: GTGGAACATTCTGCGCAACAACATCGGCAAAGACCT...CCAAGGCACCTGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS-3UTR CAA 90 bp AGGAGTAGGCCGAGACAGCAAAGGCTGCGATGTACACCATGCGCTCGCAGGGGTACAGGCATTGACACCTaGGACAGGTCTTTGCCGATG +
Preference number: 5 (lower is better)
Translates to: RSRPRQQRLRCTPCARRGTGIDT*DRSLPM
Trigger: CATCGGCAAAGACCTGTCCAAGGTGTCAATGCCTGT...ACCCCTGCGAGCGCATGGTGTACATCGCAGCCTTTGCTGTCTCGGCCTACTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579728.5
CDS-3UTR CAA 90 bp GCAGACTGTGAGAAAGAGCAGCGATGTGGTGGACCCCCAGCAGGGGGAAGGCGGCTTCCACTTCATATCTaGCCAGAAGGCGAAGTTCTC +
Preference number: 5 (lower is better)
Translates to: ADCEKEQRCGGPPAGGRRLPLHI*PEGEVL
Trigger: GAGAACTTCGCCTTCTGGCAAGATATGAAGTGGAAG...CCGCCTTCCCCCTGCTGGGGGTCCACCACATCGCTGCTCTTTCTCACAGTCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS-3UTR CAA 90 bp CAGACTGTGAGAAAGAGCAGCGATGTGGTGGACCCCCAGCAGGGGGAAGGCGGGACAATCTCCAGGGATTaGCCCCAGAACTTGTTCTTC +
Preference number: 5 (lower is better)
Translates to: QTVRKSSDVVDPQQGEGGTISRD*PQNLFF
Trigger: GAAGAACAAGTTCTGGGGCAAATCCCTGGAGATTGT...CCCGCCTTCCCCCTGCTGGGGGTCCACCACATCGCTGCTCTTTCTCACAGTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS-3UTR CAA 90 bp GCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCTACATGAACTTACACTGGGCAGGCTGACGTaGACTGTTCCCACAGGCACA +
Preference number: 5 (lower is better)
Translates to: ACKQGTGAHAYTLLHELTLGRLT*TVPTGT
Trigger: TGTGCCTGTGGGAACAGTCAACGTCAGCCTGCCCAG...TGTAAGTTCATGTAGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS-3UTR CAA 90 bp GGAACTCCAGTACTTGGCCTTGCAGAAGGTGATCTTGCAGTGGCAGGAGCTGTCCTGGGCAGGCTGACGTaGACTGTTCCCACAGGCACA +
Preference number: 5 (lower is better)
Translates to: GTPVLGLAEGDLAVAGAVLGRLT*TVPTGT
Trigger: TGTGCCTGTGGGAACAGTCAACGTCAGCCTGCCCAG...GACAGCTCCTGCCACTGCAAGATCACCTTCTGCAAGGCCAAGTACTGGAGTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579728.5
CDS-3UTR CAA 90 bp AGCGGGAAGGGTCTTACATGCTGGTTGTCTGGGGCAAGGAGACTGGGGAAGCACTTGCAGAAGGTGATCTaGCAGTGGCAGGAGCTGTCC +
Preference number: 5 (lower is better)
Translates to: SGKGLTCWLSGARRLGKHLQKVI*QWQELS
Trigger: GGACAGCTCCTGCCACTGCAAGATCACCTTCTGCAA...GTGCTTCCCCAGTCTCCTTGCCCCAGACAACCAGCATGTAAGACCCTTCCCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000007414.8
ENST00000579728.5
CDS-3UTR CAA 90 bp GAGGGAGCCCTGCTTGCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCGCCTGGTGTACGATGTaGTTTTCCTCCATGACTTTG +
Preference number: 5 (lower is better)
Translates to: EGALLACKQGTGAHAYTLAWCTM*FSSMTL
Trigger: CAAAGTCATGGAGGAAAACAACATCGTACACCAGGC...GAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGCAAGCAGGGCTCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CAA 90 bp GGAGCCCTGCTTGCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCTAGAAGCTGCAGGCATTTaGCAGTTAGGGAGAAGGGAT +
Preference number: 5 (lower is better)
Translates to: GALLACKQGTGAHAYTLLEAAGI*QLGRRD
Trigger: ATCCCTTCTCCCTAACTGCAAAATGCCTGCAGCTTC...TAGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGCAAGCAGGGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CAA 90 bp CTACATGAACTTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGACAGCCTCACCCCCATTCTaGACAACTCTGAGCCCTGGT +
Preference number: 5 (lower is better)
Translates to: LHELTLTPAHSLPVGQRTASPPF*TTLSPG
Trigger: ACCAGGGCTCAGAGTTGTCAAGAATGGGGGTGAGGC...TGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAGTTCATGTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613735.4
CDS GCA 90 bp CCCGTCCAATGGTGTCATCCTTGGCAAAGCTCTGGGTGCACCACATaGGGCTTGTCCGTTTCCCCTTCTTGGGTCTTTCGGTTGTCACTG +
Preference number: 5 (lower is better)
Translates to: PVQWCHPWQSSGCTT*GLSVSPSWVFRLSL
Trigger: CAGTGACAACCGAAAGACCCAAGAAGGGGAAACGGACAAGCCGCATGTGGTGCACCCAGAGCTTTGCCAAGGATGACACCATTGGACGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000580140.5
ENST00000580808.1
ENST00000583167.5
ENST00000584698.1
ENST00000613735.4
CDS GCA 90 bp CCGAGATCACACATTCAGCAAGTGGTGGACCTGGGATTCAGACCCTaGTCTGGTCGATTCCAGATACCCCATGCCTGCCCAGGGCATACT +
Preference number: 5 (lower is better)
Translates to: PRSHIQQVVDLGFRP*SGRFQIPHACPGHT
Trigger: AGTATGCCCTGGGCAGGCATGGGGTATCTGGAATCGACCAGAGCAGGGTCTGAATCCCAGGTCCACCACTTGCTGAATGTGTGATCTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580226.5
CDS CCA 90 bp TGGAGACGACCAACCCGTCCAATGGTGTCATCCTTGGCAAAGCTCTaGGTGCACCACATGCGGCTTGTCCGTTTCCCCTTCTTGGGTCTT +
Preference number: 5 (lower is better)
Translates to: WRRPTRPMVSSLAKL*VHHMRLVRFPFLGL
Trigger: AAGACCCAAGAAGGGGAAACGGACAAGCCGCATGTGGTGCACCCAGAGCTTTGCCAAGGATGACACCATTGGACGGGTTGGTCGTCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000580140.5
ENST00000580808.1
ENST00000584698.1
ENST00000613735.4
CDS-3UTR CAA 90 bp AATGTCATAGCAATTCGCCCTCATCAGAGGCAGACTGTGAGAAAGAGCAGCGATGGACGCCAGTACTCCTaGGCCCTTGCGCCGCTCTGC +
Preference number: 5 (lower is better)
Translates to: NVIAIRPHQRQTVRKSSDGRQYS*ALAPLC
Trigger: GCAGAGCGGCGCAAGGGCCAAGGAGTACTGGCGTCC...ATCGCTGCTCTTTCTCACAGTCTGCCTCTGATGAGGGCGAATTGCTATGACATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000613735.4
CDS-3UTR CAA 90 bp ATGGTGAAGCGGGAAGGGTCTTACATGCTGGTTGTCTGGGGCAAGGAGACTGGGCGCTGGGCCTTTTTGTaGATGGACATGACCGACAGC +
Preference number: 5 (lower is better)
Translates to: MVKREGSYMLVVWGKETGRWAFL*MDMTDS
Trigger: GCTGTCGGTCATGTCCATCAACAAAAAGGCCCAGCG...CCCAGTCTCCTTGCCCCAGACAACCAGCATGTAAGACCCTTCCCGCTTCACCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CAA 90 bp TGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCTACATGAACTTACACTCACAGGGTTGAAGGGCTaGCAGCCGGCTCGGTGGTAT +
Preference number: 5 (lower is better)
Translates to: CKQGTGAHAYTLLHELTLTGLKG*QPARWY
Trigger: ATACCACCGAGCCGGCTGCAAGCCCTTCAACCCTGT...GAGTGTAAGTTCATGTAGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS-3UTR CAA 90 bp TTTGCGCCTGTCTCGCTGCAGCTGCTCGATCCTTCTCTTCTGGGCCTCAGCGGCACAATCTCCAGGGATTaGCCCCAGAACTTGTTCTTC +
Preference number: 5 (lower is better)
Translates to: FAPVSLQLLDPSLLGLSGTISRD*PQNLFF
Trigger: GAAGAACAAGTTCTGGGGCAAATCCCTGGAGATTGT...GCCGCTGAGGCCCAGAAGAGAAGGATCGAGCAGCTGCAGCGAGACAGGCGCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579728.5
CDS-3UTR CAA 90 bp ATGGTGAAGCGGGAAGGGTCTTACATGCTGGTTGTCTGGGGCAAGGAGACTGGGTTGCAGAAGGTGATCTaGCAGTGGCAGGAGCTGTCC +
Preference number: 5 (lower is better)
Translates to: MVKREGSYMLVVWGKETGLQKVI*QWQELS
Trigger: GGACAGCTCCTGCCACTGCAAGATCACCTTCTGCAA...CCCAGTCTCCTTGCCCCAGACAACCAGCATGTAAGACCCTTCCCGCTTCACCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007414.8
ENST00000579728.5
CDS-3UTR CAA 90 bp TCAGAGGCAGACTGTGAGAAAGAGCAGCGATGTGGTGGACCCCCAGCAGGGGGATTGGAACTCCAGTACTaGGCCTTGCAGAAGGTGATC +
Preference number: 5 (lower is better)
Translates to: SEADCEKEQRCGGPPAGGLELQY*ALQKVI
Trigger: GATCACCTTCTGCAAGGCCAAGTACTGGAGTTCCAA...TCCCCCTGCTGGGGGTCCACCACATCGCTGCTCTTTCTCACAGTCTGCCTCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS-3UTR CAA 90 bp GGCATTGAGTTGGGTTTCCAGATGCACTGGCCACCTGGCGTGGGTCCCCGGTACGCCTGGTGTACGATGTaGTTTTCCTCCATGACTTTG +
Preference number: 5 (lower is better)
Translates to: GIELGFQMHWPPGVGPRYAWCTM*FSSMTL
Trigger: CAAAGTCATGGAGGAAAACAACATCGTACACCAGGC...GTACCGGGGACCCACGCCAGGTGGCCAGTGCATCTGGAAACCCAACTCAATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CAA 90 bp AGTCTCGTGTCGGTGGAAGGCAGCGACCGTTTCAGCTCTGCTGTCAGCTCATTCGGTCTTACATGCTGGTaGTCTGGGGCAAGGAGACTG +
Preference number: 5 (lower is better)
Translates to: SLVSVEGSDRFSSAVSSFGLTCW*SGARRL
Trigger: CAGTCTCCTTGCCCCAGACAACCAGCATGTAAGACC...GAATGAGCTGACAGCAGAGCTGAAACGGTCGCTGCCTTCCACCGACACGAGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
CDS TCA 90 bp AGAGAGATCCTGGGTACCCAGGCCTTCAGTTCCTTGTTCCCAGCCTaGGAATGGGACCAGGATGAGGGTGGTAAAGCCCCCATTTCTTGG +
Preference number: 5 (lower is better)
Translates to: REILGTQAFSSLFPA*EWDQDEGGKAPISW
Trigger: CCAAGAAATGGGGGCTTTACCACCCTCATCCTGGTCCCATTCTCAGGCTGGGAACAAGGAACTGAAGGCCTGGGTACCCAGGATCTCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580226.5
CDS GCA 90 bp ACGTATGACCTCCCTTACCATGACAGCTCTGCACCTGGGGGATGGTaGTCTCCCATTAGAGGTGAGGAAGCTATGGCCCAGGGATGTAAC +
Preference number: 5 (lower is better)
Translates to: TYDLPYHDSSAPGGW*SPIRGEEAMAQGCN
Trigger: GTTACATCCCTGGGCCATAGCTTCCTCACCTCTAATGGGAGAGCACCATCCCCCAGGTGCAGAGCTGTCATGGTAAGGGAGGTCATACGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580226.5
CDS CCA 90 bp CTGCACCTGGGGGATGGTGCTCTCCCATTAGAGGTGAGGAAGCTATaGCCCAGGGATGTAACTTGCCCGAGATCACACATTCAGCAAGTG +
Preference number: 5 (lower is better)
Translates to: LHLGDGALPLEVRKL*PRDVTCPRSHIQQV
Trigger: CACTTGCTGAATGTGTGATCTCGGGCAAGTTACATCCCTGGGCCATAGCTTCCTCACCTCTAATGGGAGAGCACCATCCCCCAGGTGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580226.5
CDS CCA 90 bp TGTACGTATGACCTCCCTTACCATGACAGCTCTGCACCTGGGGGATaGTGCTCTCCCATTAGAGGTGAGGAAGCTATGGCCCAGGGATGT +
Preference number: 5 (lower is better)
Translates to: CTYDLPYHDSSAPGG*CSPIRGEEAMAQGC
Trigger: ACATCCCTGGGCCATAGCTTCCTCACCTCTAATGGGAGAGCACCATCCCCCAGGTGCAGAGCTGTCATGGTAAGGGAGGTCATACGTACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580226.5
CDS CCA 90 bp TTTTGGGCTGTCTTTGGGACTAAAAACCAACTTTGCCCACTGCCCTaGGCCTTGGCTTTCGCTGGGAGAGAAGGCACAGGAGAATCGGCC +
Preference number: 5 (lower is better)
Translates to: FWAVFGTKNQLCPLP*ALAFAGREGTGESA
Trigger: GGCCGATTCTCCTGTGCCTTCTCTCCCAGCGAAAGCCAAGGCCCAGGGCAGTGGGCAAAGTTGGTTTTTAGTCCCAAAGACAGCCCAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583167.5
CDS-3UTR CAA 90 bp TGTGTTTCGGATGAGCACCTCCCCATAGTGCTCGATCCAGCGCTGACCACTCAGCCCCTTGGTGATGTCTaGCCGGGTTGTTGCATAATG +
Preference number: 5 (lower is better)
Translates to: CVSDEHLPIVLDPALTTQPLGDV*PGCCIM
Trigger: CATTATGCAACAACCCGGCAAGACATCACCAAGGGG...CTGAGTGGTCAGCGCTGGATCGAGCACTATGGGGAGGTGCTCATCCGAAACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579728.5
CDS-3UTR CAA 90 bp TGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCTACATGAACTTACACTCCCATGGAGCTTCCCCTaGGTGATGTCTTGCCGGGTT +
Preference number: 5 (lower is better)
Translates to: CKQGTGAHAYTLLHELTLPWSFP*VMSCRV
Trigger: AACCCGGCAAGACATCACCAAGGGGAAGCTCCATGG...GAGTGTAAGTTCATGTAGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CAA 90 bp CCCAAGTACCCCAAAGGGGACAGGAATCGGAATGGTGAAGCGGGAAGGGTCTTATCTTGGGTCTTTCGGTaGTCACTGAGGCCTGGTGTG +
Preference number: 5 (lower is better)
Translates to: PKYPKGDRNRNGEAGRVLSWVFR*SLRPGV
Trigger: CACACCAGGCCTCAGTGACAACCGAAAGACCCAAGA...TAAGACCCTTCCCGCTTCACCATTCCGATTCCTGTCCCCTTTGGGGTACTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CAA 90 bp CTACATGAACTTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGACAGTCCGTTTCCCCTTCTaGGGTCTTTCGGTTGTCACT +
Preference number: 5 (lower is better)
Translates to: LHELTLTPAHSLPVGQRTVRFPF*GLSVVT
Trigger: AGTGACAACCGAAAGACCCAAGAAGGGGAAACGGAC...TGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAGTTCATGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CAA 90 bp TACATGCTGGTTGTCTGGGGCAAGGAGACTGGGGAAGCACAGATTCTGCTTCTCGTGCATGTCCCTCAGTaGGTCCCGTTCCATGGTGAG +
Preference number: 5 (lower is better)
Translates to: YMLVVWGKETGEAQILLLVHVPQ*VPFHGE
Trigger: CTCACCATGGAACGGGACCAACTGAGGGACATGCAC...GAGAAGCAGAATCTGTGCTTCCCCAGTCTCCTTGCCCCAGACAACCAGCATGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CAA 90 bp AGGGGAGGGAGAACAGATCACCTCCTCTCCTTCACTCACTGCAACCTCACCGCTCATGTACAGAGCTTCTaGCTCCTCAGGGTTGAGGGA +
Preference number: 5 (lower is better)
Translates to: RGGRTDHLLSFTHCNLTAHVQSF*LLRVEG
Trigger: TCCCTCAACCCTGAGGAGCAAGAAGCTCTGTACATG...AGCGGTGAGGTTGCAGTGAGTGAAGGAGAGGAGGTGATCTGTTCTCCCTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007414.8
ENST00000579728.5
CDS-3UTR CAA 90 bp GGGGAGGGAGAACAGATCACCTCCTCTCCTTCACTCACTGCAACCTCACCGCTGAGGTCTTTGCCGATGTaGTTGCGCAGAATGTTCCAC +
Preference number: 5 (lower is better)
Translates to: GEGEQITSSPSLTATSPLRSLPM*LRRMFH
Trigger: GTGGAACATTCTGCGCAACAACATCGGCAAAGACCT...CAGCGGTGAGGTTGCAGTGAGTGAAGGAGAGGAGGTGATCTGTTCTCCCTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007414.8
ENST00000579728.5
CDS-3UTR CAA 90 bp ACTCTCCTACATGAACTTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGACAGGCATTGACACCTaGGACAGGTCTTTGCCGATG +
Preference number: 5 (lower is better)
Translates to: TLLHELTLTPAHSLPVGQTGIDT*DRSLPM
Trigger: CATCGGCAAAGACCTGTCCAAGGTGTCAATGCCTGT...CTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAGTTCATGTAGGAGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS-3UTR CAA 90 bp GCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCTACATGAACTTACATTTTCCTCCATGACTTaGCGCCTGTCTCGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: ACKQGTGAHAYTLLHELTFSSMT*RLSRCS
Trigger: GCTGCAGCGAGACAGGCGCAAAGTCATGGAGGAAAA...TGTAAGTTCATGTAGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CAA 90 bp TCCAGTAGGTATTGTTGGTCACCCACCACTCTTTCCCGCTGCTATCCGTCTGCCTTTTCCTCCATGACTTaGCGCCTGTCTCGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: SSRYCWSPTTLSRCYPSAFSSMT*RLSRCS
Trigger: GCTGCAGCGAGACAGGCGCAAAGTCATGGAGGAAAA...GGCAGACGGATAGCAGCGGGAAAGAGTGGTGGGTGACCAACAATACCTACTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578461.1
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CAA 90 bp GACTTTGCGCCTGTCTCGCTGCAGCTGCTCGATCCTTCTCTTCTGGGCCTCAGCGCCTGGTGTACGATGTaGTTTTCCTCCATGACTTTG +
Preference number: 5 (lower is better)
Translates to: DFAPVSLQLLDPSLLGLSAWCTM*FSSMTL
Trigger: CAAAGTCATGGAGGAAAACAACATCGTACACCAGGC...GCTGAGGCCCAGAAGAGAAGGATCGAGCAGCTGCAGCGAGACAGGCGCAAAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578461.1
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CAA 90 bp GGAAGGGTCTTACATGCTGGTTGTCTGGGGCAAGGAGACTGGGGAAGCACAGATGGTCTTACATGCTGGTaGTCTGGGGCAAGGAGACTG +
Preference number: 5 (lower is better)
Translates to: GRVLHAGCLGQGDWGSTDGLTCW*SGARRL
Trigger: CAGTCTCCTTGCCCCAGACAACCAGCATGTAAGACC...ATCTGTGCTTCCCCAGTCTCCTTGCCCCAGACAACCAGCATGTAAGACCCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CAA 90 bp GCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCTACATGAACTTACAGGTCTTACATGCTGGTaGTCTGGGGCAAGGAGACTG +
Preference number: 5 (lower is better)
Translates to: ACKQGTGAHAYTLLHELTGLTCW*SGARRL
Trigger: CAGTCTCCTTGCCCCAGACAACCAGCATGTAAGACC...TGTAAGTTCATGTAGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CAA 90 bp AGCGGGAAGGGTCTTACATGCTGGTTGTCTGGGGCAAGGAGACTGGGGAAGCACGAAGCTGCAGGCATTTaGCAGTTAGGGAGAAGGGAT +
Preference number: 5 (lower is better)
Translates to: SGKGLTCWLSGARRLGKHEAAGI*QLGRRD
Trigger: ATCCCTTCTCCCTAACTGCAAAATGCCTGCAGCTTC...GTGCTTCCCCAGTCTCCTTGCCCCAGACAACCAGCATGTAAGACCCTTCCCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CAA 90 bp TACATGCTGGTTGTCTGGGGCAAGGAGACTGGGGAAGCACAGATTCTGCTTCTCCTCCTGACGGGGTCCTaGAAGCAAGAGAAAGACCCC +
Preference number: 5 (lower is better)
Translates to: YMLVVWGKETGEAQILLLLLTGS*KQEKDP
Trigger: GGGGTCTTTCTCTTGCTTCAAGGACCCCGTCAGGAG...GAGAAGCAGAATCTGTGCTTCCCCAGTCTCCTTGCCCCAGACAACCAGCATGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000579728.5
CDS-3UTR CAA 90 bp TGGAATGTCATAGCAATTCGCCCTCATCAGAGGCAGACTGTGAGAAAGAGCAGCGAGGTCCTCCCCACCTaGCCGCATCTCTGCAGAGAC +
Preference number: 5 (lower is better)
Translates to: WNVIAIRPHQRQTVRKSSEVLPT*PHLCRD
Trigger: GTCTCTGCAGAGATGCGGCAAGGTGGGGAGGACCTC...GCTGCTCTTTCTCACAGTCTGCCTCTGATGAGGGCGAATTGCTATGACATTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613735.4
CDS-3UTR CAA 90 bp AGGGGAGGGAGAACAGATCACCTCCTCTCCTTCACTCACTGCAACCTCACCGCTTGTCTTGCCGGGTTGTaGCATAATGAAGGATCCCGT +
Preference number: 5 (lower is better)
Translates to: RGGRTDHLLSFTHCNLTACLAGL*HNEGSR
Trigger: ACGGGATCCTTCATTATGCAACAACCCGGCAAGACA...AGCGGTGAGGTTGCAGTGAGTGAAGGAGAGGAGGTGATCTGTTCTCCCTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CAA 90 bp ACTCTCCTACATGAACTTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGTGTCTTGCCGGGTTGTaGCATAATGAAGGATCCCGT +
Preference number: 5 (lower is better)
Translates to: TLLHELTLTPAHSLPVGQCLAGL*HNEGSR
Trigger: ACGGGATCCTTCATTATGCAACAACCCGGCAAGACA...CTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAGTTCATGTAGGAGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CAA 90 bp GTTTTCCTCCATGACTTTGCGCCTGTCTCGCTGCAGCTGCTCGATCCTTCTCTTCGCTGGGCCTTTTTGTaGATGGACATGACCGACAGC +
Preference number: 5 (lower is better)
Translates to: VFLHDFAPVSLQLLDPSLRWAFL*MDMTDS
Trigger: GCTGTCGGTCATGTCCATCAACAAAAAGGCCCAGCG...AAGAGAAGGATCGAGCAGCTGCAGCGAGACAGGCGCAAAGTCATGGAGGAAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CAA 90 bp GGAAGGGTCTTACATGCTGGTTGTCTGGGGCAAGGAGACTGGGGAAGCACAGATATGCGCTGGGCCTTTTaGTTGATGGACATGACCGAC +
Preference number: 5 (lower is better)
Translates to: GRVLHAGCLGQGDWGSTDMRWAF*LMDMTD
Trigger: GTCGGTCATGTCCATCAACAAAAAGGCCCAGCGCAT...ATCTGTGCTTCCCCAGTCTCCTTGCCCCAGACAACCAGCATGTAAGACCCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CAA 90 bp GCTGCTATCCGTCTGCCGCCTGAAGAAGCGAGCCTGGTGTACGATGTTGTTTTCGTCCGTTTCCCCTTCTaGGGTCTTTCGGTTGTCACT +
Preference number: 5 (lower is better)
Translates to: AAIRLPPEEASLVYDVVFVRFPF*GLSVVT
Trigger: AGTGACAACCGAAAGACCCAAGAAGGGGAAACGGAC...GAAAACAACATCGTACACCAGGCTCGCTTCTTCAGGCGGCAGACGGATAGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CAA 90 bp CCCAAAGGGGACAGGAATCGGAATGGTGAAGCGGGAAGGGTCTTACATGCTGGTGTCCGTTTCCCCTTCTaGGGTCTTTCGGTTGTCACT +
Preference number: 5 (lower is better)
Translates to: PKGDRNRNGEAGRVLHAGVRFPF*GLSVVT
Trigger: AGTGACAACCGAAAGACCCAAGAAGGGGAAACGGAC...ACCAGCATGTAAGACCCTTCCCGCTTCACCATTCCGATTCCTGTCCCCTTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CAA 90 bp AAGCAGGGCACAGGCGCACACGCATACACTCTCCTACATGAACTTACACTCACATGCACCACATGCGGCTaGTCCGTTTCCCCTTCTTGG +
Preference number: 5 (lower is better)
Translates to: KQGTGAHAYTLLHELTLTCTTCG*SVSPSW
Trigger: CCAAGAAGGGGAAACGGACAAGCCGCATGTGGTGCA...TGTGAGTGTAAGTTCATGTAGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CAA 90 bp TACACTCTCCTACATGAACTTACACTCACACCTGCGCACTCGCTGCCGGTGGGTACAGGCATTGACACCTaGGACAGGTCTTTGCCGATG +
Preference number: 5 (lower is better)
Translates to: YTLLHELTLTPAHSLPVGTGIDT*DRSLPM
Trigger: CATCGGCAAAGACCTGTCCAAGGTGTCAATGCCTGT...ACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAGTTCATGTAGGAGAGTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS-3UTR CAA 90 bp GTCTTTATTGGAGCTTGGAATGTCATAGCAATTCGCCCTCATCAGAGGCAGACTTCCCCCAGGACAGGGTaGAAGGGCTTGCAGCCGGCT +
Preference number: 5 (lower is better)
Translates to: VFIGAWNVIAIRPHQRQTSPRTG*KGLQPA
Trigger: AGCCGGCTGCAAGCCCTTCAACCCTGTCCTGGGGGA...AGTCTGCCTCTGATGAGGGCGAATTGCTATGACATTCCAAGCTCCAATAAAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS-3UTR CAA 90 bp GCCTGCAAGCAGGGCACAGGCGCACACGCATACACTCTCCTACATGAACTTACACTCCAGTACTTGGCCTaGCAGAAGGTGATCTTGCAG +
Preference number: 5 (lower is better)
Translates to: ACKQGTGAHAYTLLHELTLQYLA*QKVILQ
Trigger: CTGCAAGATCACCTTCTGCAAGGCCAAGTACTGGAG...TGTAAGTTCATGTAGGAGAGTGTATGCGTGTGCGCCTGTGCCCTGCTTGCAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS-3UTR CAA 90 bp CTACATGAACTTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGACATTGGAACTCCAGTACTaGGCCTTGCAGAAGGTGATC +
Preference number: 5 (lower is better)
Translates to: LHELTLTPAHSLPVGQRTLELQY*ALQKVI
Trigger: GATCACCTTCTGCAAGGCCAAGTACTGGAGTTCCAA...TGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAGTTCATGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS-3UTR CAA 90 bp ATGGTGAAGCGGGAAGGGTCTTACATGCTGGTTGTCTGGGGCAAGGAGACTGGGTTGGAACTCCAGTACTaGGCCTTGCAGAAGGTGATC +
Preference number: 5 (lower is better)
Translates to: MVKREGSYMLVVWGKETGLELQY*ALQKVI
Trigger: GATCACCTTCTGCAAGGCCAAGTACTGGAGTTCCAA...CCCAGTCTCCTTGCCCCAGACAACCAGCATGTAAGACCCTTCCCGCTTCACCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007414.8
ENST00000579728.5
CDS-3UTR CAA 90 bp TCCAGTAGGTATTGTTGGTCACCCACCACTCTTTCCCGCTGCTATCCGTCTGCCTGTCTTGCCGGGTTGTaGCATAATGAAGGATCCCGT +
Preference number: 5 (lower is better)
Translates to: SSRYCWSPTTLSRCYPSACLAGL*HNEGSR
Trigger: ACGGGATCCTTCATTATGCAACAACCCGGCAAGACA...GGCAGACGGATAGCAGCGGGAAAGAGTGGTGGGTGACCAACAATACCTACTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CAA 90 bp GGCAGAAGGGGAGGGAGAACAGATCACCTCCTCTCCTTCACTCACTGCAACCTCCTTCCACTTCATATCTaGCCAGAAGGCGAAGTTCTC +
Preference number: 5 (lower is better)
Translates to: GRRGGRTDHLLSFTHCNLLPLHI*PEGEVL
Trigger: GAGAACTTCGCCTTCTGGCAAGATATGAAGTGGAAG...GAGGTTGCAGTGAGTGAAGGAGAGGAGGTGATCTGTTCTCCCTCCCCTTCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007414.8
ENST00000579728.5
CDS-3UTR CAA 90 bp ACTCTCCTACATGAACTTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGACAATCTCCAGGGATTaGCCCCAGAACTTGTTCTTC +
Preference number: 5 (lower is better)
Translates to: TLLHELTLTPAHSLPVGQTISRD*PQNLFF
Trigger: GAAGAACAAGTTCTGGGGCAAATCCCTGGAGATTGT...CTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAGTTCATGTAGGAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS-3UTR CAA 90 bp CCCAAAGGGGACAGGAATCGGAATGGTGAAGCGGGAAGGGTCTTACATGCTGGTGAAGCTGCAGGCATTTaGCAGTTAGGGAGAAGGGAT +
Preference number: 5 (lower is better)
Translates to: PKGDRNRNGEAGRVLHAGEAAGI*QLGRRD
Trigger: ATCCCTTCTCCCTAACTGCAAAATGCCTGCAGCTTC...ACCAGCATGTAAGACCCTTCCCGCTTCACCATTCCGATTCCTGTCCCCTTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CAA 90 bp GACAGGAGGGATGGCCAGGGACTAACCAAAGGGAGCTGGAGAAGGCCCTGCAGGAGTCTTTATTGGAGCTaGGAATGTCATAGCAATTCG +
Preference number: 5 (lower is better)
Translates to: DRRDGQGLTKGSWRRPCRSLYWS*ECHSNS
Trigger: CGAATTGCTATGACATTCCAAGCTCCAATAAAGACT...CCTGCAGGGCCTTCTCCAGCTCCCTTTGGTTAGTCCCTGGCCATCCCTCCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS GCA 90 bp AGGATTTTTGGGCTGTCTTTGGGACTAAAAACCAACTTTGCCCACTaGCCTGGGCCTTGGCTTTCGCTGGGAGAGAAGGCACAGGAGAAT +
Preference number: 5 (lower is better)
Translates to: RIFGLSLGLKTNFAH*PGPWLSLGEKAQEN
Trigger: ATTCTCCTGTGCCTTCTCTCCCAGCGAAAGCCAAGGCCCAGGGCAGTGGGCAAAGTTGGTTTTTAGTCCCAAAGACAGCCCAAAAATCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000583167.5
CDS CCA 90 bp GGGCTGCCGCTTACCTTATGGGAAAGACAATGGAGCCAGGATTTTTaGGCTGTCTTTGGGACTAAAAACCAACTTTGCCCACTGCCCTGG +
Preference number: 5 (lower is better)
Translates to: GLPLTLWERQWSQDF*AVFGTKNQLCPLPW
Trigger: CCAGGGCAGTGGGCAAAGTTGGTTTTTAGTCCCAAAGACAGCCCAAAAATCCTGGCTCCATTGTCTTTCCCATAAGGTAAGCGGCAGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000583167.5
CDS-3UTR CAA 90 bp AGCTTGGAATGTCATAGCAATTCGCCCTCATCAGAGGCAGACTGTGAGAAAGAGGTGCATGTCCCTCAGTaGGTCCCGTTCCATGGTGAG +
Preference number: 5 (lower is better)
Translates to: SLECHSNSPSSEADCEKEVHVPQ*VPFHGE
Trigger: CTCACCATGGAACGGGACCAACTGAGGGACATGCAC...CTCTTTCTCACAGTCTGCCTCTGATGAGGGCGAATTGCTATGACATTCCAAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CAA 90 bp GTCTTTATTGGAGCTTGGAATGTCATAGCAATTCGCCCTCATCAGAGGCAGACTACAGGGTTGAAGGGCTaGCAGCCGGCTCGGTGGTAT +
Preference number: 5 (lower is better)
Translates to: VFIGAWNVIAIRPHQRQTTGLKG*QPARWY
Trigger: ATACCACCGAGCCGGCTGCAAGCCCTTCAACCCTGT...AGTCTGCCTCTGATGAGGGCGAATTGCTATGACATTCCAAGCTCCAATAAAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS-3UTR CAA 90 bp TACACTCTCCTACATGAACTTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCTTCCACTTCATATCTaGCCAGAAGGCGAAGTTCTC +
Preference number: 5 (lower is better)
Translates to: YTLLHELTLTPAHSLPVGLPLHI*PEGEVL
Trigger: GAGAACTTCGCCTTCTGGCAAGATATGAAGTGGAAG...ACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAGTTCATGTAGGAGAGTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS-3UTR CAA 90 bp GGTCTTACATGCTGGTTGTCTGGGGCAAGGAGACTGGGGAAGCACAGATTCTGCGCCTGGTGTACGATGTaGTTTTCCTCCATGACTTTG +
Preference number: 5 (lower is better)
Translates to: GLTCWLSGARRLGKHRFCAWCTM*FSSMTL
Trigger: CAAAGTCATGGAGGAAAACAACATCGTACACCAGGC...GCAGAATCTGTGCTTCCCCAGTCTCCTTGCCCCAGACAACCAGCATGTAAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CAA 90 bp GTCTTTATTGGAGCTTGGAATGTCATAGCAATTCGCCCTCATCAGAGGCAGACTACGGGAGGGAACCGCTaGAGGATCAGGGACGAAGGA +
Preference number: 5 (lower is better)
Translates to: VFIGAWNVIAIRPHQRQTTGGNR*RIRDEG
Trigger: TCCTTCGTCCCTGATCCTCAAGCGGTTCCCTCCCGT...AGTCTGCCTCTGATGAGGGCGAATTGCTATGACATTCCAAGCTCCAATAAAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CAA 90 bp AACTTACACTCACACCTGCGCACTCGCTGCCGGTGGGTCAGAGGACAGGTGCCTAGTCTTTATTGGAGCTaGGAATGTCATAGCAATTCG +
Preference number: 5 (lower is better)
Translates to: NLHSHLRTRCRWVRGQVPSLYWS*ECHSNS
Trigger: CGAATTGCTATGACATTCCAAGCTCCAATAAAGACT...AGGCACCTGTCCTCTGACCCACCGGCAGCGAGTGCGCAGGTGTGAGTGTAAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CAA 90 bp TGGAATGTCATAGCAATTCGCCCTCATCAGAGGCAGACTGTGAGAAAGAGCAGCCCCCTTGGTGATGTCTaGCCGGGTTGTTGCATAATG +
Preference number: 5 (lower is better)
Translates to: WNVIAIRPHQRQTVRKSSPLGDV*PGCCIM
Trigger: CATTATGCAACAACCCGGCAAGACATCACCAAGGGG...GCTGCTCTTTCTCACAGTCTGCCTCTGATGAGGGCGAATTGCTATGACATTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CAA 90 bp GACAGTCTTTATTGGAGCTTGGAATGTCATAGCAATTCGCCCTCATCAGAGGCACCATGGAGCTTCCCCTaGGTGATGTCTTGCCGGGTT +
Preference number: 5 (lower is better)
Translates to: DSLYWSLECHSNSPSSEAPWSFP*VMSCRV
Trigger: AACCCGGCAAGACATCACCAAGGGGAAGCTCCATGG...TGCCTCTGATGAGGGCGAATTGCTATGACATTCCAAGCTCCAATAAAGACTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CAA 90 bp GACAGTCTTTATTGGAGCTTGGAATGTCATAGCAATTCGCCCTCATCAGAGGCATGCACCACATGCGGCTaGTCCGTTTCCCCTTCTTGG +
Preference number: 5 (lower is better)
Translates to: DSLYWSLECHSNSPSSEACTTCG*SVSPSW
Trigger: CCAAGAAGGGGAAACGGACAAGCCGCATGTGGTGCA...TGCCTCTGATGAGGGCGAATTGCTATGACATTCCAAGCTCCAATAAAGACTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS TCA 90 bp AGCCCTCTGTGTGCACTAACCCATTCAATCCTGACACCTACCCTGTaGGGTAGGTGCAATTATCACCCCCACTTTGCAGATTGGAATGCT +
Preference number: 5 (lower is better)
Translates to: SPLCALTHSILTPTL*GRCNYHPHFADWNA
Trigger: AGCATTCCAATCTGCAAAGTGGGGGTGATAATTGCACCTACCTCACAGGGTAGGTGTCAGGATTGAATGGGTTAGTGCACACAGAGGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583167.5
CDS CCA 90 bp GCACGTTGTTACACAATGATCGAGATGGGGCTGCCGCTTACCTTATaGGAAAGACAATGGAGCCAGGATTTTTGGGCTGTCTTTGGGACT +
Preference number: 5 (lower is better)
Translates to: ARCYTMIEMGLPLTL*ERQWSQDFWAVFGT
Trigger: AGTCCCAAAGACAGCCCAAAAATCCTGGCTCCATTGTCTTTCCCATAAGGTAAGCGGCAGCCCCATCTCGATCATTGTGTAACAACGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583167.5
CDS-3UTR CAA 90 bp GACAGTCTTTATTGGAGCTTGGAATGTCATAGCAATTCGCCCTCATCAGAGGCATCTTGGGTCTTTCGGTaGTCACTGAGGCCTGGTGTG +
Preference number: 5 (lower is better)
Translates to: DSLYWSLECHSNSPSSEASWVFR*SLRPGV
Trigger: CACACCAGGCCTCAGTGACAACCGAAAGACCCAAGA...TGCCTCTGATGAGGGCGAATTGCTATGACATTCCAAGCTCCAATAAAGACTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CAA 90 bp GACAGTCTTTATTGGAGCTTGGAATGTCATAGCAATTCGCCCTCATCAGAGGCAAGCACAAAGTATCTCTaGTGCCAGCCCTTCAGAGGC +
Preference number: 5 (lower is better)
Translates to: DSLYWSLECHSNSPSSEASTKYL*CQPFRG
Trigger: GCCTCTGAAGGGCTGGCACAAGAGATACTTTGTGCT...TGCCTCTGATGAGGGCGAATTGCTATGACATTCCAAGCTCCAATAAAGACTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CAA 90 bp GACAGTCTTTATTGGAGCTTGGAATGTCATAGCAATTCGCCCTCATCAGAGGCACCCCTTGGTGATGTCTaGCCGGGTTGTTGCATAATG +
Preference number: 5 (lower is better)
Translates to: DSLYWSLECHSNSPSSEAPLGDV*PGCCIM
Trigger: CATTATGCAACAACCCGGCAAGACATCACCAAGGGG...TGCCTCTGATGAGGGCGAATTGCTATGACATTCCAAGCTCCAATAAAGACTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CAA 90 bp GTCTTTATTGGAGCTTGGAATGTCATAGCAATTCGCCCTCATCAGAGGCAGACTCTCCAGTACTTGGCCTaGCAGAAGGTGATCTTGCAG +
Preference number: 5 (lower is better)
Translates to: VFIGAWNVIAIRPHQRQTLQYLA*QKVILQ
Trigger: CTGCAAGATCACCTTCTGCAAGGCCAAGTACTGGAG...AGTCTGCCTCTGATGAGGGCGAATTGCTATGACATTCCAAGCTCCAATAAAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS-3UTR CAA 90 bp GTCTTTATTGGAGCTTGGAATGTCATAGCAATTCGCCCTCATCAGAGGCAGACTTGTCTTGCCGGGTTGTaGCATAATGAAGGATCCCGT +
Preference number: 5 (lower is better)
Translates to: VFIGAWNVIAIRPHQRQTCLAGL*HNEGSR
Trigger: ACGGGATCCTTCATTATGCAACAACCCGGCAAGACA...AGTCTGCCTCTGATGAGGGCGAATTGCTATGACATTCCAAGCTCCAATAAAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CAA 90 bp GTCTTTATTGGAGCTTGGAATGTCATAGCAATTCGCCCTCATCAGAGGCAGACTAGGTCTTTGCCGATGTaGTTGCGCAGAATGTTCCAC +
Preference number: 5 (lower is better)
Translates to: VFIGAWNVIAIRPHQRQTRSLPM*LRRMFH
Trigger: GTGGAACATTCTGCGCAACAACATCGGCAAAGACCT...AGTCTGCCTCTGATGAGGGCGAATTGCTATGACATTCCAAGCTCCAATAAAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS-3UTR CAA 90 bp AGCTTGGAATGTCATAGCAATTCGCCCTCATCAGAGGCAGACTGTGAGAAAGAGGCCTGGTGTACGATGTaGTTTTCCTCCATGACTTTG +
Preference number: 5 (lower is better)
Translates to: SLECHSNSPSSEADCEKEAWCTM*FSSMTL
Trigger: CAAAGTCATGGAGGAAAACAACATCGTACACCAGGC...CTCTTTCTCACAGTCTGCCTCTGATGAGGGCGAATTGCTATGACATTCCAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CAA 90 bp ACAGGCGCACACGCATACACTCTCCTACATGAACTTACACTCACACCTGCGCACAGTCTTTATTGGAGCTaGGAATGTCATAGCAATTCG +
Preference number: 5 (lower is better)
Translates to: TGAHAYTLLHELTLTPAHSLYWS*ECHSNS
Trigger: CGAATTGCTATGACATTCCAAGCTCCAATAAAGACT...GTGCGCAGGTGTGAGTGTAAGTTCATGTAGGAGAGTGTATGCGTGTGCGCCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS-3UTR CAA 90 bp GACAGTCTTTATTGGAGCTTGGAATGTCATAGCAATTCGCCCTCATCAGAGGCAAGTCTTTATTGGAGCTaGGAATGTCATAGCAATTCG +
Preference number: 5 (lower is better)
Translates to: DSLYWSLECHSNSPSSEASLYWS*ECHSNS
Trigger: CGAATTGCTATGACATTCCAAGCTCCAATAAAGACT...TGCCTCTGATGAGGGCGAATTGCTATGACATTCCAAGCTCCAATAAAGACTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000613735.4
CDS CCA 72 bp GTACTGGGCAGTGAGCCACGGGGCATGTCCAGGCGGTaGGCTAGGCGGTGGGCACGCAGCTGCGCCACCCAG +
Preference number: 6 (lower is better)
Translates to: VLGSEPRGMSRR*ARRWARSCATQ
Trigger: CTGGGTGGCGCAGCTGCGTGCCCACCGCCTAGCCCACCGCCTGGACATGCCCCGTGGCTCACTGCCCAGTAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000580140.5
ENST00000584698.1
ENST00000613735.4
CDS CCA 72 bp GAGCCACGGGGCATGTCCAGGCGGTGGGCTAGGCGGTaGGCACGCAGCTGCGCCACCCAGCTCTGGAATAGG +
Preference number: 6 (lower is better)
Translates to: EPRGMSRRWARR*ARSCATQLWNR
Trigger: CCTATTCCAGAGCTGGGTGGCGCAGCTGCGTGCCCACCGCCTAGCCCACCGCCTGGACATGCCCCGTGGCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000580140.5
ENST00000584698.1
ENST00000613735.4
CDS CCA 72 bp GGGCCCAGAAGCTGCGCTGCAGGTGGGCATAGTCTGTaGGTGGCAGCCCACGGGTGCCCGAGGAGTCCCGAG +
Preference number: 6 (lower is better)
Translates to: GPRSCAAGGHSL*VAAHGCPRSPE
Trigger: CTCGGGACTCCTCGGGCACCCGTGGGCTGCCACCCACAGACTATGCCCACCTGCAGCGCAGCTTCTGGGCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000580140.5
ENST00000580808.1
ENST00000583167.5
ENST00000613735.4
CDS CAA 90 bp CTGACGGGGTCCCCAGGGTCCATGGACGCCAGTACTCCTTGGCCCTaGCGCCGCTCTGCCTCTGAGTCACCGTCTCCGAGTCACCGGCTC +
Preference number: 6 (lower is better)
Translates to: LTGSPGSMDASTPWP*RRSASESPSPSHRL
Trigger: GAGCCGGTGACTCGGAGACGGTGACTCAGAGGCAGAGCGGCGCAAGGGCCAAGGAGTACTGGCGTCCATGGACCCTGGGGACCCCGTCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000580140.5
ENST00000580226.5
ENST00000613735.4
CDS CCA 72 bp CCAGAAGCTGCGCTGCAGGTGGGCATAGTCTGTGGGTaGCAGCCCACGGGTGCCCGAGGAGTCCCGAGACTC +
Preference number: 6 (lower is better)
Translates to: PEAALQVGIVCG*QPTGARGVPRL
Trigger: GAGTCTCGGGACTCCTCGGGCACCCGTGGGCTGCCACCCACAGACTATGCCCACCTGCAGCGCAGCTTCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000580140.5
ENST00000580808.1
ENST00000583167.5
ENST00000613735.4
CDS CCA 72 bp GGGCCTCCCCCGGGCAGCTGGGCAGTGCCCAGGGCCTaGCAAGAATCTGCCCAACTAGCCCTTTGGTGGGAA +
Preference number: 6 (lower is better)
Translates to: GPPPGSWAVPRA*QESAQLALWWE
Trigger: TTCCCACCAAAGGGCTAGTTGGGCAGATTCTTGCCAGGCCCTGGGCACTGCCCAGCTGCCCGGGGGAGGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583167.5
CDS TCA 72 bp ACCGTCTCCGAGTCACCGGCTCCCTCCTCACCGCGCTaGGCAGTGGCAGCAGCTGCTGCAGGAACCAGGAAG +
Preference number: 6 (lower is better)
Translates to: TVSESPAPSSPR*AVAAAAAGTRK
Trigger: CTTCCTGGTTCCTGCAGCAGCTGCTGCCACTGCTCAGCGCGGTGAGGAGGGAGCCGGTGACTCGGAGACGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000580140.5
CDS GCA 72 bp GCAGGTGGGCATAGTCTGTGGGTGGCAGCCCACGGGTaGCCGAGGAGTCCCGAGACTCCAGGTAGCGAGACA +
Preference number: 6 (lower is better)
Translates to: AGGHSLWVAAHG*PRSPETPGSET
Trigger: TGTCTCGCTACCTGGAGTCTCGGGACTCCTCGGGCACCCGTGGGCTGCCACCCACAGACTATGCCCACCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000580140.5
ENST00000580808.1
ENST00000583167.5
ENST00000584698.1
ENST00000613735.4
CDS GCA 72 bp GGAAGGGCTGAAGGGGCCGGCCTCCTTAGAGCATCCTaGCCCAGCTACGTGAGGTGCATGCCCGACCTCACC +
Preference number: 6 (lower is better)
Translates to: GRAEGAGLLRAS*PSYVRCMPDLT
Trigger: GGTGAGGTCGGGCATGCACCTCACGTAGCTGGGGCAGGATGCTCTAAGGAGGCCGGCCCCTTCAGCCCTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583167.5
CDS TCA 72 bp ATCTGCTATCGGACCCCAGGCTGGCAGTCCTCAGCTTaGAGCCCTCTCCCCGCACCAGTCACCCTGTCCCCC +
Preference number: 6 (lower is better)
Translates to: ICYRTPGWQSSA*SPLPAPVTLSP
Trigger: GGGGGACAGGGTGACTGGTGCGGGGAGAGGGCTTCAAGCTGAGGACTGCCAGCCTGGGGTCCGATAGCAGAT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000580140.5
ENST00000580808.1
ENST00000583167.5
ENST00000613735.4
CDS TCA 72 bp GGGCCGGCCTCCTTAGAGCATCCTGCCCCAGCTACGTaGGGTGCATGCCCGACCTCACCCGTCCAATGGTGT +
Preference number: 6 (lower is better)
Translates to: GPASLEHPAPAT*GACPTSPVQWC
Trigger: ACACCATTGGACGGGTGAGGTCGGGCATGCACCTCACGTAGCTGGGGCAGGATGCTCTAAGGAGGCCGGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583167.5
CDS GCA 72 bp ATGTCCAGGCGGTGGGCTAGGCGGTGGGCACGCAGCTaGGCCACCCAGCTCTGGAATAGGTCCTGGGATTTG +
Preference number: 6 (lower is better)
Translates to: MSRRWARRWARS*ATQLWNRSWDL
Trigger: CAAATCCCAGGACCTATTCCAGAGCTGGGTGGCGCAGCTGCGTGCCCACCGCCTAGCCCACCGCCTGGACAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000580140.5
ENST00000584698.1
ENST00000613735.4
CDS CCA 72 bp GGCACTCTGAGCCCTAAGACATTGCCCCGGGATGCCTaGCATCACGGAGTGTGCCCAGCCACCTTGGGAAGG +
Preference number: 6 (lower is better)
Translates to: GTLSPKTLPRDA*HHGVCPATLGR
Trigger: CCTTCCCAAGGTGGCTGGGCACACTCCGTGATGCCAGGCATCCCGGGGCAATGTCTTAGGGCTCAGAGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583167.5
CDS GCA 72 bp GGCCTCCTTAGAGCATCCTGCCCCAGCTACGTGAGGTaGATGCCCGACCTCACCCGTCCAATGGTGTCATCC +
Preference number: 6 (lower is better)
Translates to: GLLRASCPSYVR*MPDLTRPMVSS
Trigger: GGATGACACCATTGGACGGGTGAGGTCGGGCATGCACCTCACGTAGCTGGGGCAGGATGCTCTAAGGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583167.5
CDS GCA 72 bp GGGGTGAGCTCGCGCCCCTTCATGTACAGAGCTTCTTaGTGTGGGAGCAGCCAGATGGATGTCAGGCTCCGG +
Preference number: 6 (lower is better)
Translates to: GVSSRPFMYRAS*CGSSQMDVRLR
Trigger: CCGGAGCCTGACATCCATCTGGCTGCTCCCACAGCAAGAAGCTCTGTACATGAAGGGGCGCGAGCTCACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583167.5
CDS CCA 72 bp CAGGCAGGAAGGGCGGGTCCCTCTCTTGGAAGTCCATaGAGAAGGGAGAGGCCACTCCCTGCTGGGGATGTA +
Preference number: 6 (lower is better)
Translates to: QAGRAGPSLGSP*RRERPLPAGDV
Trigger: TACATCCCCAGCAGGGAGTGGCCTCTCCCTTCTCCATGGACTTCCAAGAGAGGGACCCGCCCTTCCTGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000580140.5
ENST00000580226.5
ENST00000585051.1
ENST00000613735.4
CDS CCA 72 bp CTTGACAACTCTGAGCCCTGGTGCATGTCCCTCAGTTaGTCCCGTTCCATGGTGAGGGCGGCCAGGACGCTG +
Preference number: 6 (lower is better)
Translates to: LDNSEPWCMSLS*SRSMVRAARTL
Trigger: CAGCGTCCTGGCCGCCCTCACCATGGAACGGGACCAACTGAGGGACATGCACCAGGGCTCAGAGTTGTCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000580140.5
ENST00000580808.1
ENST00000583167.5
ENST00000613735.4
CDS CCA 72 bp CAAAGCCGGCAGGCAGGAGAGCCAGATTTGAACCCGTaGAACGTAGCCCCAGCGTCTGTGCTCAGAGCCCGA +
Preference number: 6 (lower is better)
Translates to: QSRQAGEPDLNP*NVAPASVLRAR
Trigger: TCGGGCTCTGAGCACAGACGCTGGGGCTACGTTCCACGGGTTCAAATCTGGCTCTCCTGCCTGCCGGCTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583167.5
CDS CCA 72 bp GAGCTCGCGCCCCTTCATGTACAGAGCTTCTTGCTGTaGGAGCAGCCAGATGGATGTCAGGCTCCGGGGCCA +
Preference number: 6 (lower is better)
Translates to: ELAPLHVQSFLL*EQPDGCQAPGP
Trigger: TGGCCCCGGAGCCTGACATCCATCTGGCTGCTCCCACAGCAAGAAGCTCTGTACATGAAGGGGCGCGAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583167.5
CDS TCA 72 bp GCCGGACATCGATGGAGCCATGGAGCTTCCCCTTGGTaGTCTGGGGGTGAAGTGTTGGTAGAGGGAGAGGGG +
Preference number: 6 (lower is better)
Translates to: AGHRWSHGASPW*SGGEVLVEGEG
Trigger: CCCCTCTCCCTCTACCAACACTTCACCCCCAGATCACCAAGGGGAAGCTCCATGGCTCCATCGATGTCCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584698.1
CDS GCA 72 bp TACTGGGGCCAGACTCCTCCCACAACCCCAAGCCACTaGCCGGGCTCACGTCTTGCCGGGTTGTTGCATAAT +
Preference number: 6 (lower is better)
Translates to: YWGQTPPTTPSH*PGSRLAGLLHN
Trigger: ATTATGCAACAACCCGGCAAGACGTGAGCCCGGGCAGTGGCTTGGGGTTGTGGGAGGAGTCTGGCCCCAGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580226.5
CDS GCA 72 bp AGACCCTGCTCTGGTCGATTCCAGATACCCCATGCCTaGCCAGGGCATACTGGGGCCAGACTCCTCCCACAA +
Preference number: 6 (lower is better)
Translates to: RPCSGRFQIPHA*PGHTGARLLPQ
Trigger: TTGTGGGAGGAGTCTGGCCCCAGTATGCCCTGGGCAGGCATGGGGTATCTGGAATCGACCAGAGCAGGGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580226.5
CDS GCA 72 bp ATTCAGACCCTGCTCTGGTCGATTCCAGATACCCCATaGCTGCCCAGGGCATACTGGGGCCAGACTCCTCCC +
Preference number: 6 (lower is better)
Translates to: IQTLLWSIPDTP*LPRAYWGQTPP
Trigger: GGGAGGAGTCTGGCCCCAGTATGCCCTGGGCAGGCATGGGGTATCTGGAATCGACCAGAGCAGGGTCTGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580226.5
CDS CCA 72 bp CCGAGGAGTCCCGAGACTCCAGGTAGCGAGACAGGTTaGGAACAGAGCCATGGAGACGACCAACCCGTCCAA +
Preference number: 6 (lower is better)
Translates to: PRSPETPGSETG*EQSHGDDQPVQ
Trigger: TTGGACGGGTTGGTCGTCTCCATGGCTCTGTTCCCAACCTGTCTCGCTACCTGGAGTCTCGGGACTCCTCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000580140.5
ENST00000580808.1
ENST00000584698.1
ENST00000613735.4
CDS CCA 72 bp GCATGCCCGACCTCACCCGTCCAATGGTGTCATCCTTaGCAAAGCTCTGGGTGCACCACATGCGGCTTGTCC +
Preference number: 6 (lower is better)
Translates to: ACPTSPVQWCHP*QSSGCTTCGLS
Trigger: GGACAAGCCGCATGTGGTGCACCCAGAGCTTTGCCAAGGATGACACCATTGGACGGGTGAGGTCGGGCATGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583167.5
CDS CAA 72 bp CTCCCACAACCCCAAGCCACTGCCCGGGCTCACGTCTaGCCGGGTTGTTGCATAATGAAGGATCCCGTCCTC +
Preference number: 6 (lower is better)
Translates to: LPQPQATARAHV*PGCCIMKDPVL
Trigger: GAGGACGGGATCCTTCATTATGCAACAACCCGGCAAGACGTGAGCCCGGGCAGTGGCTTGGGGTTGTGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580226.5
CDS CAA 90 bp GCCAGACTCCTCCCACAACCCCAAGCCACTGCCCGGGCTCACGTCTaGCCGGGTTGTTGCATAATGAAGGATCCCGTCCTCGAGCACAAA +
Preference number: 6 (lower is better)
Translates to: ARLLPQPQATARAHV*PGCCIMKDPVLEHK
Trigger: TTTGTGCTCGAGGACGGGATCCTTCATTATGCAACAACCCGGCAAGACGTGAGCCCGGGCAGTGGCTTGGGGTTGTGGGAGGAGTCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580226.5
CDS CAA 90 bp TACGTGAGGTGCATGCCCGACCTCACCCGTCCAATGGTGTCATCCTaGGCAAAGCTCTGGGTGCACCACATGCGGCTTGTCCGTTTCCCC +
Preference number: 6 (lower is better)
Translates to: YVRCMPDLTRPMVSS*AKLWVHHMRLVRFP
Trigger: GGGGAAACGGACAAGCCGCATGTGGTGCACCCAGAGCTTTGCCAAGGATGACACCATTGGACGGGTGAGGTCGGGCATGCACCTCACGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583167.5
CDS TCA 72 bp TTGGGAACAGAGCCATGGAGACGACCAACCTGTAGGTaGAGGGGAAGGGCTGAAGGGGCCGGCCTCCTTAGA +
Preference number: 6 (lower is better)
Translates to: LGTEPWRRPTCR*RGRAEGAGLLR
Trigger: TCTAAGGAGGCCGGCCCCTTCAGCCCTTCCCCTTCACCTACAGGTTGGTCGTCTCCATGGCTCTGTTCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583167.5
CDS CCA 72 bp GAATCAGCAAGGGACAGGATGCTGGTCTGCGATAGCTaGGGGGTGAGCTCGCGCCCCTTCATGTACAGAGCT +
Preference number: 6 (lower is better)
Translates to: ESARDRMLVCDS*GVSSRPFMYRA
Trigger: AGCTCTGTACATGAAGGGGCGCGAGCTCACCCCCCAGCTATCGCAGACCAGCATCCTGTCCCTTGCTGATTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000583167.5
CDS CCA 72 bp CCAGGCCTCACCCCCATTCTTGACAACTCTGAGCCCTaGTGCATGTCCCTCAGTTGGTCCCGTTCCATGGTG +
Preference number: 6 (lower is better)
Translates to: PGLTPILDNSEP*CMSLSWSRSMV
Trigger: CACCATGGAACGGGACCAACTGAGGGACATGCACCAGGGCTCAGAGTTGTCAAGAATGGGGGTGAGGCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000580140.5
ENST00000580808.1
ENST00000583167.5
ENST00000613735.4
CDS CCA 72 bp CCGAGGAGTCCCGAGACTCCAGGTAGCGAGACAGGTTaGGAACAGAGCCATGGAGACGACCAACCTGTAGGT +
Preference number: 6 (lower is better)
Translates to: PRSPETPGSETG*EQSHGDDQPVG
Trigger: ACCTACAGGTTGGTCGTCTCCATGGCTCTGTTCCCAACCTGTCTCGCTACCTGGAGTCTCGGGACTCCTCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583167.5
CDS CAA 72 bp ACCCCAAGCCACTGCCCGGGCTCACGTCTTGCCGGGTaGTTGCATAATGAAGGATCCCGTCCTCGAGCACAA +
Preference number: 6 (lower is better)
Translates to: TPSHCPGSRLAG*LHNEGSRPRAQ
Trigger: TTGTGCTCGAGGACGGGATCCTTCATTATGCAACAACCCGGCAAGACGTGAGCCCGGGCAGTGGCTTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580226.5
CDS CAA 72 bp TGCATGCCCGACCTCACCCGTCCAATGGTGTCATCCTaGGCAAAGCTCTGGGTGCACCACATGCGGCTTGTC +
Preference number: 6 (lower is better)
Translates to: CMPDLTRPMVSS*AKLWVHHMRLV
Trigger: GACAAGCCGCATGTGGTGCACCCAGAGCTTTGCCAAGGATGACACCATTGGACGGGTGAGGTCGGGCATGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583167.5
CDS CAA 72 bp TCAGGATCACAAAGCCGGCAGGCAGGAGAGCCAGATTaGAACCCGTGGAACGTAGCCCCAGCGTCTGTGCTC +
Preference number: 6 (lower is better)
Translates to: SGSQSRQAGEPD*NPWNVAPASVL
Trigger: GAGCACAGACGCTGGGGCTACGTTCCACGGGTTCAAATCTGGCTCTCCTGCCTGCCGGCTTTGTGATCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583167.5
CDS CAA 90 bp CCTCCCACAACCCCAAGCCACTGCCCGGGCTCACGTCTTGCCGGGTaGTTGCATAATGAAGGATCCCGTCCTCGAGCACAAAGTATCTCT +
Preference number: 6 (lower is better)
Translates to: PPTTPSHCPGSRLAG*LHNEGSRPRAQSIS
Trigger: AGAGATACTTTGTGCTCGAGGACGGGATCCTTCATTATGCAACAACCCGGCAAGACGTGAGCCCGGGCAGTGGCTTGGGGTTGTGGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580226.5
CDS CAA 90 bp GCTGTCTTTGGGACTAAAAACCAACTTTGCCCACTGCCCTGGGCCTaGGCTTTCGCTGGGAGAGAAGGCACAGGAGAATCGGCCCCCACA +
Preference number: 6 (lower is better)
Translates to: AVFGTKNQLCPLPWA*AFAGREGTGESAPT
Trigger: TGTGGGGGCCGATTCTCCTGTGCCTTCTCTCCCAGCGAAAGCCAAGGCCCAGGGCAGTGGGCAAAGTTGGTTTTTAGTCCCAAAGACAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000583167.5
CDS TCA 72 bp ATGAAGGATCCCGTCCTCGAGCACAAAGTATCTCTGTaGTGTTGCCCAGGAGTGACAGGACCCGGGAGGCCG +
Preference number: 6 (lower is better)
Translates to: MKDPVLEHKVSL*CCPGVTGPGRP
Trigger: CGGCCTCCCGGGTCCTGTCACTCCTGGGCAACATCACAGAGATACTTTGTGCTCGAGGACGGGATCCTTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585051.1
CDS GCA 72 bp CCCGTCCAATGGTGTCATCCTTGGCAAAGCTCTGGGTaGACCACATGCGGCTTGTCCGTTTCCCCTTCTTGG +
Preference number: 6 (lower is better)
Translates to: PVQWCHPWQSSG*TTCGLSVSPSW
Trigger: CCAAGAAGGGGAAACGGACAAGCCGCATGTGGTGCACCCAGAGCTTTGCCAAGGATGACACCATTGGACGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000580140.5
ENST00000580808.1
ENST00000583167.5
ENST00000584698.1
ENST00000613735.4
CDS GCA 72 bp GGCACTGACCCTGAGCCCCACTCCAAGCCCTCTGTGTaGACTAACCCATTCAATCCTGACACCTACCCTGTG +
Preference number: 6 (lower is better)
Translates to: GTDPEPHSKPSV*TNPFNPDTYPV
Trigger: CACAGGGTAGGTGTCAGGATTGAATGGGTTAGTGCACACAGAGGGCTTGGAGTGGGGCTCAGGGTCAGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583167.5
CDS CCA 72 bp CCAACCCGTCCAATGGTGTCATCCTTGGCAAAGCTCTaGGTGCACCACATGCGGCTTGTCCGTTTCCCCTTC +
Preference number: 6 (lower is better)
Translates to: PTRPMVSSLAKL*VHHMRLVRFPF
Trigger: GAAGGGGAAACGGACAAGCCGCATGTGGTGCACCCAGAGCTTTGCCAAGGATGACACCATTGGACGGGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000580140.5
ENST00000580808.1
ENST00000584698.1
ENST00000613735.4
CDS CCA 72 bp CATGGAGACGACCAACCCGTCCAATGGTGTCATCCTTaGCAAAGCTCTGGGTGCACCACATGCGGCTTGTCC +
Preference number: 6 (lower is better)
Translates to: HGDDQPVQWCHP*QSSGCTTCGLS
Trigger: GGACAAGCCGCATGTGGTGCACCCAGAGCTTTGCCAAGGATGACACCATTGGACGGGTTGGTCGTCTCCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000580140.5
ENST00000580808.1
ENST00000584698.1
ENST00000613735.4
CDS CCA 72 bp GCCTCAGAGACCCCCATTCTTGACAACTCTGAGCCCTaGTGCATGTCCCTCAGTTGGTCCCGTTCCATGGTG +
Preference number: 6 (lower is better)
Translates to: ASETPILDNSEP*CMSLSWSRSMV
Trigger: CACCATGGAACGGGACCAACTGAGGGACATGCACCAGGGCTCAGAGTTGTCAAGAATGGGGGTCTCTGAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
CDS CCA 72 bp GACCTCCCTTACCATGACAGCTCTGCACCTGGGGGATaGTGCTCTCCCATTAGAGGTGAGGAAGCTATGGCC +
Preference number: 6 (lower is better)
Translates to: DLPYHDSSAPGG*CSPIRGEEAMA
Trigger: GGCCATAGCTTCCTCACCTCTAATGGGAGAGCACCATCCCCCAGGTGCAGAGCTGTCATGGTAAGGGAGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580226.5
CDS CCA 72 bp CTCACCCGTCCAATGGTGTCATCCTTGGCAAAGCTCTaGGTGCACCACATGCGGCTTGTCCGTTTCCCCTTC +
Preference number: 6 (lower is better)
Translates to: LTRPMVSSLAKL*VHHMRLVRFPF
Trigger: GAAGGGGAAACGGACAAGCCGCATGTGGTGCACCCAGAGCTTTGCCAAGGATGACACCATTGGACGGGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583167.5
CDS CAA 72 bp TGGGTGCACCACATGCGGCTTGTCCGTTTCCCCTTCTaGGGTCTTTCGGTTGTCACTGAGGCCTGGTGTGTG +
Preference number: 6 (lower is better)
Translates to: WVHHMRLVRFPF*GLSVVTEAWCV
Trigger: CACACACCAGGCCTCAGTGACAACCGAAAGACCCAAGAAGGGGAAACGGACAAGCCGCATGTGGTGCACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000580140.5
ENST00000584698.1
ENST00000613735.4
CDS CAA 72 bp CCATGGAGACGACCAACCCGTCCAATGGTGTCATCCTaGGCAAAGCTCTGGGTGCACCACATGCGGCTTGTC +
Preference number: 6 (lower is better)
Translates to: PWRRPTRPMVSS*AKLWVHHMRLV
Trigger: GACAAGCCGCATGTGGTGCACCCAGAGCTTTGCCAAGGATGACACCATTGGACGGGTTGGTCGTCTCCATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000580140.5
ENST00000580808.1
ENST00000584698.1
ENST00000613735.4
CDS CAA 72 bp CCAAGCCACTGCCCGGGCTCACGTCTTGCCGGGTTGTaGCATAATGAAGGATCCCGTCCTCGAGCACAAAGT +
Preference number: 6 (lower is better)
Translates to: PSHCPGSRLAGL*HNEGSRPRAQS
Trigger: ACTTTGTGCTCGAGGACGGGATCCTTCATTATGCAACAACCCGGCAAGACGTGAGCCCGGGCAGTGGCTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580226.5
CDS CAA 72 bp TGCGGCTTGTCCGTTTCCCCTTCTTGGGTCTTTCGGTaGTCACTGAGGCCTGGCAAGTCAAGGTGGGGGCAA +
Preference number: 6 (lower is better)
Translates to: CGLSVSPSWVFR*SLRPGKSRWGQ
Trigger: TTGCCCCCACCTTGACTTGCCAGGCCTCAGTGACAACCGAAAGACCCAAGAAGGGGAAACGGACAAGCCGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000580808.1
ENST00000583167.5
CDS CAA 72 bp TGGGTGCACCACATGCGGCTTGTCCGTTTCCCCTTCTaGGGTCTTTCGGTTGTCACTGAGGCCTGGCAAGTC +
Preference number: 6 (lower is better)
Translates to: WVHHMRLVRFPF*GLSVVTEAWQV
Trigger: GACTTGCCAGGCCTCAGTGACAACCGAAAGACCCAAGAAGGGGAAACGGACAAGCCGCATGTGGTGCACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580808.1
ENST00000583167.5
CDS CAA 72 bp GGATCAAGCAGGGCACCCGCTTGCCTGACAGTTCCCTaGAGAGGGAGGCATAACCGGGCACTTTTGCTGAGT +
Preference number: 6 (lower is better)
Translates to: GSSRAPACLTVP*RGRHNRALLLS
Trigger: ACTCAGCAAAAGTGCCCGGTTATGCCTCCCTCTCAAGGGAACTGTCAGGCAAGCGGGTGCCCTGCTTGATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583167.5
CDS CAA 90 bp GCAAAGCTCTGGGTGCACCACATGCGGCTTGTCCGTTTCCCCTTCTaGGGTCTTTCGGTTGTCACTGAGGCCTGGTGTGTGGGGATAACA +
Preference number: 6 (lower is better)
Translates to: AKLWVHHMRLVRFPF*GLSVVTEAWCVGIT
Trigger: TGTTATCCCCACACACCAGGCCTCAGTGACAACCGAAAGACCCAAGAAGGGGAAACGGACAAGCCGCATGTGGTGCACCCAGAGCTTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000580140.5
ENST00000584698.1
ENST00000613735.4
CDS CAA 90 bp CCCACAACCCCAAGCCACTGCCCGGGCTCACGTCTTGCCGGGTTGTaGCATAATGAAGGATCCCGTCCTCGAGCACAAAGTATCTCTTGT +
Preference number: 6 (lower is better)
Translates to: PTTPSHCPGSRLAGL*HNEGSRPRAQSISC
Trigger: ACAAGAGATACTTTGTGCTCGAGGACGGGATCCTTCATTATGCAACAACCCGGCAAGACGTGAGCCCGGGCAGTGGCTTGGGGTTGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580226.5
CDS GCA 72 bp TGGTGTCATCCTTGGCAAAGCTCTGGGTGCACCACATaGGGCTTGTCCGTTTCCCCTTCTTGGGTCTTTCGG +
Preference number: 6 (lower is better)
Translates to: WCHPWQSSGCTT*GLSVSPSWVFR
Trigger: CCGAAAGACCCAAGAAGGGGAAACGGACAAGCCGCATGTGGTGCACCCAGAGCTTTGCCAAGGATGACACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000580140.5
ENST00000580808.1
ENST00000583167.5
ENST00000584698.1
ENST00000613735.4
CDS GCA 72 bp CACATTCAGCAAGTGGTGGACCTGGGATTCAGACCCTaGTCTGGTCGATTCCAGATACCCCATGCCTGCCCA +
Preference number: 6 (lower is better)
Translates to: HIQQVVDLGFRP*SGRFQIPHACP
Trigger: TGGGCAGGCATGGGGTATCTGGAATCGACCAGAGCAGGGTCTGAATCCCAGGTCCACCACTTGCTGAATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580226.5
CDS GCA 72 bp GGGCTGTCTTTGGGACTAAAAACCAACTTTGCCCACTaGCCTGGGCCTTGGCTTTCGCTGGGAGAGAAGGCA +
Preference number: 6 (lower is better)
Translates to: GLSLGLKTNFAH*PGPWLSLGEKA
Trigger: TGCCTTCTCTCCCAGCGAAAGCCAAGGCCCAGGGCAGTGGGCAAAGTTGGTTTTTAGTCCCAAAGACAGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583167.5
CDS CCA 72 bp ATGGACATGACCGACAGCCGGACATCGATGGAGCCATaGAGCTTCCCCTTGGTGATGTCTTGCCGGGTTGTT +
Preference number: 6 (lower is better)
Translates to: MDMTDSRTSMEP*SFPLVMSCRVV
Trigger: AACAACCCGGCAAGACATCACCAAGGGGAAGCTCCATGGCTCCATCGATGTCCGGCTGTCGGTCATGTCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000580140.5
ENST00000613735.4
CDS CCA 72 bp GAGAGGAGAACCTCGCAGGCATCGAAGAACTCCGTGTaGGAATCAGCAAGGGACAGGATGCTGGTCTGCGAT +
Preference number: 6 (lower is better)
Translates to: ERRTSQASKNSV*ESARDRMLVCD
Trigger: ATCGCAGACCAGCATCCTGTCCCTTGCTGATTCCCACACGGAGTTCTTCGATGCCTGCGAGGTTCTCCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000583167.5
CDS CAA 90 bp GCTTGCCTGACAGTTCCCTTGAGAGGGAGGCATAACCGGGCACTTTaGCTGAGTCAGACACCTTCTGAGCAGAAGAGGCAGAGAGGAGTG +
Preference number: 6 (lower is better)
Translates to: ACLTVPLRGRHNRAL*LSQTPSEQKRQRGV
Trigger: CACTCCTCTCTGCCTCTTCTGCTCAGAAGGTGTCTGACTCAGCAAAAGTGCCCGGTTATGCCTCCCTCTCAAGGGAACTGTCAGGCAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583167.5
CDS TCA 72 bp GGAGTGACAGGACCCGGGAGGCCGAGAGGAAGGGCATaGGGGAGAAGGCAACCACACAAATTAGCTTTTCTT +
Preference number: 6 (lower is better)
Translates to: GVTGPGRPRGRA*GRRQPHKLAFL
Trigger: AAGAAAAGCTAATTTGTGTGGTTGCCTTCTCCCTCATGCCCTTCCTCTCGGCCTCCCGGGTCCTGTCACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585051.1
CDS GCA 72 bp TCTCGTGTCGGTGGAAGGCAGCGACCGTTTCAGCTCTaGTGTCAGCTCATTCAGCTCCAAGGCAAATGGGTT +
Preference number: 6 (lower is better)
Translates to: SRVGGRQRPFQL*CQLIQLQGKWV
Trigger: AACCCATTTGCCTTGGAGCTGAATGAGCTGACAGCAGAGCTGAAACGGTCGCTGCCTTCCACCGACACGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578461.1
CDS CCA 72 bp GTCTTTGGGACTAAAAACCAACTTTGCCCACTGCCCTaGGCCTTGGCTTTCGCTGGGAGAGAAGGCACAGGA +
Preference number: 6 (lower is better)
Translates to: VFGTKNQLCPLP*ALAFAGREGTG
Trigger: TCCTGTGCCTTCTCTCCCAGCGAAAGCCAAGGCCCAGGGCAGTGGGCAAAGTTGGTTTTTAGTCCCAAAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583167.5
CDS CAA 72 bp CATCCTTGGCAAAGCTCTGGGTGCACCACATGCGGCTaGTCCGTTTCCCCTTCTTGGGTCTTTCGGTTGTCA +
Preference number: 6 (lower is better)
Translates to: HPWQSSGCTTCG*SVSPSWVFRLS
Trigger: TGACAACCGAAAGACCCAAGAAGGGGAAACGGACAAGCCGCATGTGGTGCACCCAGAGCTTTGCCAAGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000007414.8
ENST00000392507.7
ENST00000579728.5
ENST00000580140.5
ENST00000580808.1
ENST00000583167.5
ENST00000584698.1
ENST00000613735.4
CDS CCA 72 bp CTTGCCCGAGATCACACATTCAGCAAGTGGTGGACCTaGGATTCAGACCCTGCTCTGGTCGATTCCAGATAC +
Preference number: 6 (lower is better)
Translates to: LARDHTFSKWWT*DSDPALVDSRY
Trigger: GTATCTGGAATCGACCAGAGCAGGGTCTGAATCCCAGGTCCACCACTTGCTGAATGTGTGATCTCGGGCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580226.5
CDS CCA 72 bp GGGGATGGTGCTCTCCCATTAGAGGTGAGGAAGCTATaGCCCAGGGATGTAACTTGCCCGAGATCACACATT +
Preference number: 6 (lower is better)
Translates to: GDGALPLEVRKL*PRDVTCPRSHI
Trigger: AATGTGTGATCTCGGGCAAGTTACATCCCTGGGCCATAGCTTCCTCACCTCTAATGGGAGAGCACCATCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580226.5
CDS CCA 72 bp TGGGACCAGGATGAGGGTGGTAAAGCCCCCATTTCTTaGGCACTTATTCTGCCCTGTCCAGAGAGCCTTGTA +
Preference number: 6 (lower is better)
Translates to: WDQDEGGKAPIS*ALILPCPESLV
Trigger: TACAAGGCTCTCTGGACAGGGCAGAATAAGTGCCCAAGAAATGGGGGCTTTACCACCCTCATCCTGGTCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580226.5
CDS CCA 72 bp AGAATCTGCCCAACTAGCCCTCATTCTCAGAAGAGCTaGCGGAGAGGAGAACCTCGCAGGCATCGAAGAACT +
Preference number: 6 (lower is better)
Translates to: RICPTSPHSQKS*RRGEPRRHRRT
Trigger: AGTTCTTCGATGCCTGCGAGGTTCTCCTCTCCGCCAGCTCTTCTGAGAATGAGGGCTAGTTGGGCAGATTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579728.5
CDS CCA 72 bp GAGATGGGGCTGCCGCTTACCTTATGGGAAAGACAATaGAGCCAGGATTTTTGGGCTGTCTTTGGGACTAAA +
Preference number: 6 (lower is better)
Translates to: EMGLPLTLWERQ*SQDFWAVFGTK
Trigger: TTTAGTCCCAAAGACAGCCCAAAAATCCTGGCTCCATTGTCTTTCCCATAAGGTAAGCGGCAGCCCCATCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583167.5
CDS CAA 90 bp TTACCTTATGGGAAAGACAATGGAGCCAGGATTTTTGGGCTGTCTTaGGGACTAAAAACCAACTTTGCCCACTGCCCTGGGCCTTGGCTT +
Preference number: 6 (lower is better)
Translates to: LPYGKDNGARIFGLS*GLKTNFAHCPGPWL
Trigger: AAGCCAAGGCCCAGGGCAGTGGGCAAAGTTGGTTTTTAGTCCCAAAGACAGCCCAAAAATCCTGGCTCCATTGTCTTTCCCATAAGGTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000583167.5
CDS CCA 72 bp GGTTGCAACTATGGCAGTAGTTTCAGGAGAACCCAATaGGGATACAAATGTCACACTCCTCTAGGAGAAGAG +
Preference number: 6 (lower is better)
Translates to: GCNYGSSFRRTQ*GYKCHTPLGEE
Trigger: CTCTTCTCCTAGAGGAGTGTGACATTTGTATCCCCATTGGGTTCTCCTGAAACTACTGCCATAGTTGCAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583167.5
CDS CCA 72 bp CTTACCTTATGGGAAAGACAATGGAGCCAGGATTTTTaGGCTGTCTTTGGGACTAAAAACCAACTTTGCCCA +
Preference number: 6 (lower is better)
Translates to: LTLWERQWSQDF*AVFGTKNQLCP
Trigger: TGGGCAAAGTTGGTTTTTAGTCCCAAAGACAGCCCAAAAATCCTGGCTCCATTGTCTTTCCCATAAGGTAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000583167.5