RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OSBPL6 (Homo sapiens)

Ensembl gene IDs: ENSG00000079156

Ensembl transcript IDs: ENST00000190611.9, ENST00000315022.2, ENST00000357080.8, ENST00000359685.7, ENST00000392505.6, ENST00000409045.7, ENST00000409631.5, ENST00000477097.1

Found 881 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACACTTGAAGTCTGCACTGACCGACTGCTTGTGGCCCAGGAGTCCTaGGATAGGGGATGGTGCTTCCAGACAGTGGAACAATCGTGTGGT +
Preference number: 1 (lower is better)
Translates to: TLEVCTDRLLVAQES*DRGWCFQTVEQSCG
Trigger: ACCACACGATTGTTCCACTGTCTGGAAGCACCATCCCCTATCGCAGGACTCCTGGGCCACAAGCAGTCGGTCAGTGCAGACTTCAAGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
3UTR CCA 90 bp CACATCAAACAGACACACTTGAAGTCTGCACTGACCGACTGCTTGTaGCCCAGGAGTCCTGCGATAGGGGATGGTGCTTCCAGACAGTGG +
Preference number: 1 (lower is better)
Translates to: HIKQTHLKSALTDCL*PRSPAIGDGASRQW
Trigger: CCACTGTCTGGAAGCACCATCCCCTATCGCAGGACTCCTGGGCCACAAGCAGTCGGTCAGTGCAGACTTCAAGTGTGTCTGTTTGATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
3UTR GCA 90 bp TCACACCACATCAAACAGACACACTTGAAGTCTGCACTGACCGACTaGTTGTGGCCCAGGAGTCCTGCGATAGGGGATGGTGCTTCCAGA +
Preference number: 1 (lower is better)
Translates to: SHHIKQTHLKSALTD*LWPRSPAIGDGASR
Trigger: TCTGGAAGCACCATCCCCTATCGCAGGACTCCTGGGCCACAAGCAGTCGGTCAGTGCAGACTTCAAGTGTGTCTGTTTGATGTGGTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
3UTR GCA 90 bp AAGGCCAGCACAATCACACCACATCAAACAGACACACTTGAAGTCTaGACTGACCGACTGCTTGTGGCCCAGGAGTCCTGCGATAGGGGA +
Preference number: 1 (lower is better)
Translates to: KASTITPHQTDTLEV*TDRLLVAQESCDRG
Trigger: TCCCCTATCGCAGGACTCCTGGGCCACAAGCAGTCGGTCAGTGCAGACTTCAAGTGTGTCTGTTTGATGTGGTGTGATTGTGCTGGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
3UTR CCA 90 bp TGCACTGACCGACTGCTTGTGGCCCAGGAGTCCTGCGATAGGGGATaGTGCTTCCAGACAGTGGAACAATCGTGTGGTTTCTATGTTGTT +
Preference number: 1 (lower is better)
Translates to: CTDRLLVAQESCDRG*CFQTVEQSCGFYVV
Trigger: AACAACATAGAAACCACACGATTGTTCCACTGTCTGGAAGCACCATCCCCTATCGCAGGACTCCTGGGCCACAAGCAGTCGGTCAGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
3UTR GCA 90 bp ACTGACCGACTGCTTGTGGCCCAGGAGTCCTGCGATAGGGGATGGTaGTTCCAGACAGTGGAACAATCGTGTGGTTTCTATGTTGTTGTT +
Preference number: 1 (lower is better)
Translates to: TDRLLVAQESCDRGW*FQTVEQSCGFYVVV
Trigger: AACAACAACATAGAAACCACACGATTGTTCCACTGTCTGGAAGCACCATCCCCTATCGCAGGACTCCTGGGCCACAAGCAGTCGGTCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
3UTR TCA 90 bp TCGATGAGCTTCTGGTCAGCCTCTACCAGTGCTGGTGTGTGCCATTaGTCCGCTCAGTCTAGCCAAGTCCTCAGAATCATCGTCACTTAT +
Preference number: 1 (lower is better)
Translates to: SMSFWSASTSAGVCH*SAQSSQVLRIIVTY
Trigger: ATAAGTGACGATGATTCTGAGGACTTGGCTAGACTGAGCGGATCAATGGCACACACCAGCACTGGTAGAGGCTGACCAGAAGCTCATCGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
3UTR TCA 90 bp CCATCTACCTTAAAATGTCCCGGGGGCAGAGGGTGCTTGTTACAATaGGGATTCTCGGTCCACACCCTAGATCTGTGGACTCAGAATCTT +
Preference number: 1 (lower is better)
Translates to: PSTLKCPGGRGCLLQ*GFSVHTLDLWTQNL
Trigger: AAGATTCTGAGTCCACAGATCTAGGGTGTGGACCGAGAATCCTCATTGTAACAAGCACCCTCTGCCCCCGGGACATTTTAAGGTAGATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000190611.9
3UTR CCA 90 bp TTGTGGCCCAGGAGTCCTGCGATAGGGGATGGTGCTTCCAGACAGTaGAACAATCGTGTGGTTTCTATGTTGTTGTTAACTTTCTTGATC +
Preference number: 1 (lower is better)
Translates to: LWPRSPAIGDGASRQ*NNRVVSMLLLTFLI
Trigger: GATCAAGAAAGTTAACAACAACATAGAAACCACACGATTGTTCCACTGTCTGGAAGCACCATCCCCTATCGCAGGACTCCTGGGCCACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
3UTR TCA 90 bp TTTGGAGGGAAACTCAGGAATCAGCCTGTAAACAAATATCCAAGATaGTTTTCGTGGCCCACCTGGGATCCAACCATATGCCCCCAAGAA +
Preference number: 1 (lower is better)
Translates to: FGGKLRNQPVNKYPR*FSWPTWDPTICPQE
Trigger: TTCTTGGGGGCATATGGTTGGATCCCAGGTGGGCCACGAAAATCATCTTGGATATTTGTTTACAGGCTGATTCCTGAGTTTCCCTCCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000190611.9
3UTR TCA 90 bp TCTCATTCTCATCTTGAAGTCCTCATCAGAGTGTCAGGCTACCTCTaGCCAACATTCACTCACCTGATTTGTACCATGACCTTACTGTCT +
Preference number: 1 (lower is better)
Translates to: SHSHLEVLIRVSGYL*PTFTHLICTMTLLS
Trigger: AGACAGTAAGGTCATGGTACAAATCAGGTGAGTGAATGTTGGTCAGAGGTAGCCTGACACTCTGATGAGGACTTCAAGATGAGAATGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
3UTR TCA 90 bp GTTCTCAGTGGAATTCGACTAGTGTCAGTGGAGCGGGCATGGGATTaGGACATGGATTACATGGTGCTTCACTCAAAAACAATTACATTT +
Preference number: 1 (lower is better)
Translates to: VLSGIRLVSVERAWD*DMDYMVLHSKTITF
Trigger: AAATGTAATTGTTTTTGAGTGAAGCACCATGTAATCCATGTCTCAATCCCATGCCCGCTCCACTGACACTAGTCGAATTCCACTGAGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
3UTR TCA 90 bp TATCATTTCAAGAGCAGTCATTCTGGATACCGACGGCTTTGTCAGTaGGTCTTTCATTACACAGAAGAGAAAAACACTTCCCAGGGTTTC +
Preference number: 1 (lower is better)
Translates to: YHFKSSHSGYRRLCQ*VFHYTEEKNTSQGF
Trigger: GAAACCCTGGGAAGTGTTTTTCTCTTCTGTGTAATGAAAGACTCACTGACAAAGCCGTCGGTATCCAGAATGACTGCTCTTGAAATGATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000190611.9
3UTR GCA 90 bp ACAAACTTTATTTACTGTGCCACATTCATAATATACTGGGCCAAGTaGAAACATTTATTACATCCCCTGGTGTGTGCAGAGCTCTGCTCC +
Preference number: 1 (lower is better)
Translates to: TNFIYCATFIIYWAK*KHLLHPLVCAELCS
Trigger: GGAGCAGAGCTCTGCACACACCAGGGGATGTAATAAATGTTTGCACTTGGCCCAGTATATTATGAATGTGGCACAGTAAATAAAGTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
3UTR CCA 90 bp TCCCTGATCATCATCATCAAAATATCATTTCAAGAGCAGTCATTCTaGATACCGACGGCTTTGTCAGTGAGTCTTTCATTACACAGAAGA +
Preference number: 1 (lower is better)
Translates to: SLIIIIKISFQEQSF*IPTALSVSLSLHRR
Trigger: TCTTCTGTGTAATGAAAGACTCACTGACAAAGCCGTCGGTATCCAGAATGACTGCTCTTGAAATGATATTTTGATGATGATGATCAGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000190611.9
3UTR CCA 90 bp ATTTTGTACACAAACTTTATTTACTGTGCCACATTCATAATATACTaGGCCAAGTGCAAACATTTATTACATCCCCTGGTGTGTGCAGAG +
Preference number: 1 (lower is better)
Translates to: ILYTNFIYCATFIIY*AKCKHLLHPLVCAE
Trigger: CTCTGCACACACCAGGGGATGTAATAAATGTTTGCACTTGGCCCAGTATATTATGAATGTGGCACAGTAAATAAAGTTTGTGTACAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
3UTR CAA 90 bp CACCACATCAAACAGACACACTTGAAGTCTGCACTGACCGACTGCTaGTGGCCCAGGAGTCCTGCGATAGGGGATGGTGCTTCCAGACAG +
Preference number: 2 (lower is better)
Translates to: HHIKQTHLKSALTDC*WPRSPAIGDGASRQ
Trigger: CTGTCTGGAAGCACCATCCCCTATCGCAGGACTCCTGGGCCACAAGCAGTCGGTCAGTGCAGACTTCAAGTGTGTCTGTTTGATGTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
3UTR CAA 90 bp TTTTCGACAAGGCCAGCACAATCACACCACATCAAACAGACACACTaGAAGTCTGCACTGACCGACTGCTTGTGGCCCAGGAGTCCTGCG +
Preference number: 2 (lower is better)
Translates to: FSTRPAQSHHIKQTH*KSALTDCLWPRSPA
Trigger: CGCAGGACTCCTGGGCCACAAGCAGTCGGTCAGTGCAGACTTCAAGTGTGTCTGTTTGATGTGGTGTGATTGTGCTGGCCTTGTCGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
3UTR-3UTR GCA 90 bp TTCCCTGATGGGTCCTGGATCCTCTTCCAGCTACCTGATACCACATCTGATGGTTGCGATAGGGGATGGTaGTTCCAGACAGTGGAACAA +
Preference number: 2 (lower is better)
Translates to: FPDGSWILFQLPDTTSDGCDRGW*FQTVEQ
Trigger: TTGTTCCACTGTCTGGAAGCACCATCCCCTATCGCA...ACCATCAGATGTGGTATCAGGTAGCTGGAAGAGGATCCAGGACCCATCAGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
3UTR-3UTR GCA 90 bp ATATACTGGGCCAAGTGCAAACATTTATTACATCCCCTGGTGTGTGCAGAGCTCTCTGCACTGACCGACTaGTTGTGGCCCAGGAGTCCT +
Preference number: 2 (lower is better)
Translates to: IYWAKCKHLLHPLVCAELSALTD*LWPRSP
Trigger: AGGACTCCTGGGCCACAAGCAGTCGGTCAGTGCAGA...GAGCTCTGCACACACCAGGGGATGTAATAAATGTTTGCACTTGGCCCAGTATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
3UTR-3UTR GCA 90 bp TTCCCTGATGGGTCCTGGATCCTCTTCCAGCTACCTGATACCACATCTGATGGTGACACACTTGAAGTCTaGACTGACCGACTGCTTGTG +
Preference number: 2 (lower is better)
Translates to: FPDGSWILFQLPDTTSDGDTLEV*TDRLLV
Trigger: CACAAGCAGTCGGTCAGTGCAGACTTCAAGTGTGTC...ACCATCAGATGTGGTATCAGGTAGCTGGAAGAGGATCCAGGACCCATCAGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
3UTR-3UTR GCA 90 bp GTATTATTTTCAGGGAAGAAGCTGACCTGGATCAAGAATGTCCTGCTAGACCTTAGGTGCGCACCACCATaGCCGGCTCAGTTTCCGGTT +
Preference number: 2 (lower is better)
Translates to: VLFSGKKLTWIKNVLLDLRCAPP*PAQFPV
Trigger: AACCGGAAACTGAGCCGGGCATGGTGGTGCGCACCT...AAGGTCTAGCAGGACATTCTTGATCCAGGTCAGCTTCTTCCCTGAAAATAATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000190611.9
3UTR-3UTR GCA 90 bp ATCAAAATATCATTTCAAGAGCAGTCATTCTGGATACCGACGGCTTTGTCAGTGGTGGCCCAGGAGTCCTaGGATAGGGGATGGTGCTTC +
Preference number: 2 (lower is better)
Translates to: IKISFQEQSFWIPTALSVVAQES*DRGWCF
Trigger: GAAGCACCATCCCCTATCGCAGGACTCCTGGGCCAC...CACTGACAAAGCCGTCGGTATCCAGAATGACTGCTCTTGAAATGATATTTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000190611.9
3UTR-3UTR CCA 90 bp TGCTTCTGTTCTCAGTGGAATTCGACTAGTGTCAGTGGAGCGGGCATGGGATTGGAAAGGATCCCAAAGTaGTTAGGGGCCTTGTCTAAT +
Preference number: 2 (lower is better)
Translates to: CFCSQWNSTSVSGAGMGLERIPK*LGALSN
Trigger: ATTAGACAAGGCCCCTAACCACTTTGGGATCCTTTC...CAATCCCATGCCCGCTCCACTGACACTAGTCGAATTCCACTGAGAACAGAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
3UTR-3UTR CCA 90 bp ATATACTGGGCCAAGTGCAAACATTTATTACATCCCCTGGTGTGTGCAGAGCTCTTCCCTGATGGGTCCTaGATCCTCTTCCAGCTACCT +
Preference number: 2 (lower is better)
Translates to: IYWAKCKHLLHPLVCAELFPDGS*ILFQLP
Trigger: AGGTAGCTGGAAGAGGATCCAGGACCCATCAGGGAA...GAGCTCTGCACACACCAGGGGATGTAATAAATGTTTGCACTTGGCCCAGTATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
3UTR-3UTR GCA 90 bp TTCTGTTACAACATGTTACTACTTGATGGCGGATACTGGGGTAATGGAAGGGGAGTCAGCCTCTACCAGTaGTGGTGTGTGCCATTGATC +
Preference number: 2 (lower is better)
Translates to: FCYNMLLLDGGYWGNGRGVSLYQ*WCVPLI
Trigger: GATCAATGGCACACACCAGCACTGGTAGAGGCTGAC...TCCCCTTCCATTACCCCAGTATCCGCCATCAAGTAGTAACATGTTGTAACAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000190611.9
3UTR-3UTR CCA 90 bp TTCCCTGATGGGTCCTGGATCCTCTTCCAGCTACCTGATACCACATCTGATGGTCAGAATGTGATATGTTaGCTAGCTCTACATTCCCAG +
Preference number: 2 (lower is better)
Translates to: FPDGSWILFQLPDTTSDGQNVIC*LALHSQ
Trigger: CTGGGAATGTAGAGCTAGCCAACATATCACATTCTG...ACCATCAGATGTGGTATCAGGTAGCTGGAAGAGGATCCAGGACCCATCAGGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
3UTR-3UTR CCA 90 bp TGGACGCAGGACAGGAAATTAACGAGCCACGTAAATACAGAGATCTACTTAGCATCCTGCGATAGGGGATaGTGCTTCCAGACAGTGGAA +
Preference number: 2 (lower is better)
Translates to: WTQDRKLTSHVNTEIYLASCDRG*CFQTVE
Trigger: TTCCACTGTCTGGAAGCACCATCCCCTATCGCAGGA...TGCTAAGTAGATCTCTGTATTTACGTGGCTCGTTAATTTCCTGTCCTGCGTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
3UTR-3UTR CCA 90 bp TTCCCTGATGGGTCCTGGATCCTCTTCCAGCTACCTGATACCACATCTGATGGTTGCTTCTGTTCTCAGTaGAATTCGACTAGTGTCAGT +
Preference number: 2 (lower is better)
Translates to: FPDGSWILFQLPDTTSDGCFCSQ*NSTSVS
Trigger: ACTGACACTAGTCGAATTCCACTGAGAACAGAAGCA...ACCATCAGATGTGGTATCAGGTAGCTGGAAGAGGATCCAGGACCCATCAGGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
3UTR-3UTR TCA 90 bp AATATTCCTCTCTCTACAATTGCCCTCACTTCTATTTGGGAGGAAGGAATGGCTGAGCGGGCATGGGATTaGGACATGGATTACATGGTG +
Preference number: 2 (lower is better)
Translates to: NIPLSTIALTSIWEEGMAERAWD*DMDYMV
Trigger: CACCATGTAATCCATGTCTCAATCCCATGCCCGCTC...AGCCATTCCTTCCTCCCAAATAGAAGTGAGGGCAATTGTAGAGAGAGGAATATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000190611.9
3UTR-3UTR GCA 90 bp TGGACGCAGGACAGGAAATTAACGAGCCACGTAAATACAGAGATCTACTTAGCATGCGATAGGGGATGGTaGTTCCAGACAGTGGAACAA +
Preference number: 2 (lower is better)
Translates to: WTQDRKLTSHVNTEIYLACDRGW*FQTVEQ
Trigger: TTGTTCCACTGTCTGGAAGCACCATCCCCTATCGCA...TGCTAAGTAGATCTCTGTATTTACGTGGCTCGTTAATTTCCTGTCCTGCGTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
3UTR-3UTR GCA 90 bp AACTCAGATGCAAGGGAGGAGTTTTGGATAAATAAAATATTGCGCCATCTAGTGTCTGCACTGACCGACTaGTTGTGGCCCAGGAGTCCT +
Preference number: 2 (lower is better)
Translates to: NSDAREEFWINKILRHLVSALTD*LWPRSP
Trigger: AGGACTCCTGGGCCACAAGCAGTCGGTCAGTGCAGA...CACTAGATGGCGCAATATTTTATTTATCCAAAACTCCTCCCTTGCATCTGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
3UTR-3UTR GCA 90 bp TCTGAGAAGCATCACATCTTTTTCGACAAGGCCAGCACAATCACACCACATCAAGACACACTTGAAGTCTaGACTGACCGACTGCTTGTG +
Preference number: 2 (lower is better)
Translates to: SEKHHIFFDKASTITPHQDTLEV*TDRLLV
Trigger: CACAAGCAGTCGGTCAGTGCAGACTTCAAGTGTGTC...TTGATGTGGTGTGATTGTGCTGGCCTTGTCGAAAAAGATGTGATGCTTCTCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
3UTR-3UTR CCA 90 bp ATATACTGGGCCAAGTGCAAACATTTATTACATCCCCTGGTGTGTGCAGAGCTCGGTGCTTCCAGACAGTaGAACAATCGTGTGGTTTCT +
Preference number: 2 (lower is better)
Translates to: IYWAKCKHLLHPLVCAELGASRQ*NNRVVS
Trigger: AGAAACCACACGATTGTTCCACTGTCTGGAAGCACC...GAGCTCTGCACACACCAGGGGATGTAATAAATGTTTGCACTTGGCCCAGTATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
3UTR-3UTR CCA 90 bp ATCAAAATATCATTTCAAGAGCAGTCATTCTGGATACCGACGGCTTTGTCAGTGAGCCTCTACCAGTGCTaGTGTGTGCCATTGATCCGC +
Preference number: 2 (lower is better)
Translates to: IKISFQEQSFWIPTALSVSLYQC*CVPLIR
Trigger: GCGGATCAATGGCACACACCAGCACTGGTAGAGGCT...CACTGACAAAGCCGTCGGTATCCAGAATGACTGCTCTTGAAATGATATTTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000190611.9
3UTR-3UTR GCA 90 bp GAAGATTTTACTGCCGCAGGGCAAGCCACCTATGGATTTAAAATGGGAATGAGACTGCTCCTTTTATTCTaGTTTCCAAGGACGGTGTGG +
Preference number: 2 (lower is better)
Translates to: EDFTAAGQATYGFKMGMRLLLLF*FPRTVW
Trigger: CCACACCGTCCTTGGAAAGCAGAATAAAAGGAGCAG...TCTCATTCCCATTTTAAATCCATAGGTGGCTTGCCCTGCGGCAGTAAAATCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
3UTR-3UTR GCA 90 bp ATCAAAATATCATTTCAAGAGCAGTCATTCTGGATACCGACGGCTTTGTCAGTGGCTAAGTACAGTCGTTaGTTCCCTGATGGGTCCTGG +
Preference number: 2 (lower is better)
Translates to: IKISFQEQSFWIPTALSVAKYSR*FPDGSW
Trigger: CCAGGACCCATCAGGGAAGCAACGACTGTACTTAGC...CACTGACAAAGCCGTCGGTATCCAGAATGACTGCTCTTGAAATGATATTTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000190611.9
3UTR-3UTR GCA 90 bp ATTATCTGGACGCAGGACAGGAAATTAACGAGCCACGTAAATACAGAGATCTACCTGCTCCTTTTATTCTaGTTTCCAAGGACGGTGTGG +
Preference number: 2 (lower is better)
Translates to: IIWTQDRKLTSHVNTEIYLLLLF*FPRTVW
Trigger: CCACACCGTCCTTGGAAAGCAGAATAAAAGGAGCAG...GTAGATCTCTGTATTTACGTGGCTCGTTAATTTCCTGTCCTGCGTCCAGATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
3UTR-3UTR CCA 90 bp TTCCCTGATGGGTCCTGGATCCTCTTCCAGCTACCTGATACCACATCTGATGGTAAACTGGTCAGACTTTaGATTTTATATTCTGCTCCT +
Preference number: 2 (lower is better)
Translates to: FPDGSWILFQLPDTTSDGKLVRL*ILYSAP
Trigger: AGGAGCAGAATATAAAATCCAAAGTCTGACCAGTTT...ACCATCAGATGTGGTATCAGGTAGCTGGAAGAGGATCCAGGACCCATCAGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
3UTR-3UTR CCA 90 bp ATTATCTGGACGCAGGACAGGAAATTAACGAGCCACGTAAATACAGAGATCTACGGTGCTTCCAGACAGTaGAACAATCGTGTGGTTTCT +
Preference number: 2 (lower is better)
Translates to: IIWTQDRKLTSHVNTEIYGASRQ*NNRVVS
Trigger: AGAAACCACACGATTGTTCCACTGTCTGGAAGCACC...GTAGATCTCTGTATTTACGTGGCTCGTTAATTTCCTGTCCTGCGTCCAGATAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
3UTR-3UTR CCA 90 bp GTATTATTTTCAGGGAAGAAGCTGACCTGGATCAAGAATGTCCTGCTAGACCTTGCCCTCACTTCTATTTaGGAGGAAGGAATGGCTAGA +
Preference number: 2 (lower is better)
Translates to: VLFSGKKLTWIKNVLLDLALTSI*EEGMAR
Trigger: TCTAGCCATTCCTTCCTCCCAAATAGAAGTGAGGGC...AAGGTCTAGCAGGACATTCTTGATCCAGGTCAGCTTCTTCCCTGAAAATAATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000190611.9
3UTR CAA 90 bp TGTTCTCAGTGGAATTCGACTAGTGTCAGTGGAGCGGGCATGGGATaGAGACATGGATTACATGGTGCTTCACTCAAAAACAATTACATT +
Preference number: 2 (lower is better)
Translates to: CSQWNSTSVSGAGMG*RHGLHGASLKNNYI
Trigger: AATGTAATTGTTTTTGAGTGAAGCACCATGTAATCCATGTCTCAATCCCATGCCCGCTCCACTGACACTAGTCGAATTCCACTGAGAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
3UTR-3UTR TCA 90 bp ATCAAAATATCATTTCAAGAGCAGTCATTCTGGATACCGACGGCTTTGTCAGTGAGCATATGGAATCGATaGGCTTCTGGTCAGCCTCTA +
Preference number: 2 (lower is better)
Translates to: IKISFQEQSFWIPTALSVSIWNR*ASGQPL
Trigger: TAGAGGCTGACCAGAAGCTCATCGATTCCATATGCT...CACTGACAAAGCCGTCGGTATCCAGAATGACTGCTCTTGAAATGATATTTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000190611.9
3UTR-3UTR TCA 90 bp ATATACTGGGCCAAGTGCAAACATTTATTACATCCCCTGGTGTGTGCAGAGCTCCCTCATTATCTAGGATaGCAGAGAACAAGATTAGAC +
Preference number: 2 (lower is better)
Translates to: IYWAKCKHLLHPLVCAELPHYLG*QRTRLD
Trigger: GTCTAATCTTGTTCTCTGTCATCCTAGATAATGAGG...GAGCTCTGCACACACCAGGGGATGTAATAAATGTTTGCACTTGGCCCAGTATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
3UTR-3UTR CCA 90 bp GAAGATTTTACTGCCGCAGGGCAAGCCACCTATGGATTTAAAATGGGAATGAGATGCTTCTGTTCTCAGTaGAATTCGACTAGTGTCAGT +
Preference number: 2 (lower is better)
Translates to: EDFTAAGQATYGFKMGMRCFCSQ*NSTSVS
Trigger: ACTGACACTAGTCGAATTCCACTGAGAACAGAAGCA...TCTCATTCCCATTTTAAATCCATAGGTGGCTTGCCCTGCGGCAGTAAAATCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
3UTR CAA 90 bp GGGGATGGTGCTTCCAGACAGTGGAACAATCGTGTGGTTTCTATGTaGTTGTTAACTTTCTTGATCAGCTTTAAGCACCAGTTACCATTT +
Preference number: 2 (lower is better)
Translates to: GDGASRQWNNRVVSM*LLTFLISFKHQLPF
Trigger: AAATGGTAACTGGTGCTTAAAGCTGATCAAGAAAGTTAACAACAACATAGAAACCACACGATTGTTCCACTGTCTGGAAGCACCATCCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
3UTR-3UTR TCA 90 bp GTATTATTTTCAGGGAAGAAGCTGACCTGGATCAAGAATGTCCTGCTAGACCTTTGTTTCAAATGTTTGTaGCACAAAAGTGGGGTTGGG +
Preference number: 2 (lower is better)
Translates to: VLFSGKKLTWIKNVLLDLCFKCL*HKSGVG
Trigger: CCCAACCCCACTTTTGTGTCACAAACATTTGAAACA...AAGGTCTAGCAGGACATTCTTGATCCAGGTCAGCTTCTTCCCTGAAAATAATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000190611.9
3UTR-3UTR TCA 90 bp TTCTGTTACAACATGTTACTACTTGATGGCGGATACTGGGGTAATGGAAGGGGACAGAAACAGGAATACTaGTGCAAGTTTTCTGCAAAA +
Preference number: 2 (lower is better)
Translates to: FCYNMLLLDGGYWGNGRGQKQEY*CKFSAK
Trigger: TTTTGCAGAAAACTTGCATCAGTATTCCTGTTTCTG...TCCCCTTCCATTACCCCAGTATCCGCCATCAAGTAGTAACATGTTGTAACAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000190611.9
3UTR-3UTR GCA 90 bp ATATACTGGGCCAAGTGCAAACATTTATTACATCCCCTGGTGTGTGCAGAGCTCCTGATGCAAGTTTTCTaGAAAAGCCTCTGTATATTA +
Preference number: 2 (lower is better)
Translates to: IYWAKCKHLLHPLVCAELLMQVF*KSLCIL
Trigger: TAATATACAGAGGCTTTTGCAGAAAACTTGCATCAG...GAGCTCTGCACACACCAGGGGATGTAATAAATGTTTGCACTTGGCCCAGTATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
3UTR-3UTR CCA 90 bp ATATACTGGGCCAAGTGCAAACATTTATTACATCCCCTGGTGTGTGCAGAGCTCAAACTGGTCAGACTTTaGATTTTATATTCTGCTCCT +
Preference number: 2 (lower is better)
Translates to: IYWAKCKHLLHPLVCAELKLVRL*ILYSAP
Trigger: AGGAGCAGAATATAAAATCCAAAGTCTGACCAGTTT...GAGCTCTGCACACACCAGGGGATGTAATAAATGTTTGCACTTGGCCCAGTATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
3UTR-3UTR CCA 90 bp GTATTATTTTCAGGGAAGAAGCTGACCTGGATCAAGAATGTCCTGCTAGACCTTAAACTTCTGGTTATCTaGCTGGTTAGATTGCCTCTA +
Preference number: 2 (lower is better)
Translates to: VLFSGKKLTWIKNVLLDLKLLVI*LVRLPL
Trigger: TAGAGGCAATCTAACCAGCCAGATAACCAGAAGTTT...AAGGTCTAGCAGGACATTCTTGATCCAGGTCAGCTTCTTCCCTGAAAATAATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000190611.9
3UTR-3UTR TCA 90 bp GTATTATTTTCAGGGAAGAAGCTGACCTGGATCAAGAATGTCCTGCTAGACCTTTTAGGAATGCTTTGCTaGGGAGAAATACCACTAAAA +
Preference number: 2 (lower is better)
Translates to: VLFSGKKLTWIKNVLLDLLGMLC*GEIPLK
Trigger: TTTTAGTGGTATTTCTCCTCAGCAAAGCATTCCTAA...AAGGTCTAGCAGGACATTCTTGATCCAGGTCAGCTTCTTCCCTGAAAATAATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000190611.9
3UTR-3UTR GCA 90 bp GAAGATTTTACTGCCGCAGGGCAAGCCACCTATGGATTTAAAATGGGAATGAGACTGATGCAAGTTTTCTaGAAAAGCCTCTGTATATTA +
Preference number: 2 (lower is better)
Translates to: EDFTAAGQATYGFKMGMRLMQVF*KSLCIL
Trigger: TAATATACAGAGGCTTTTGCAGAAAACTTGCATCAG...TCTCATTCCCATTTTAAATCCATAGGTGGCTTGCCCTGCGGCAGTAAAATCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
3UTR-3UTR GCA 90 bp TTCTGTTACAACATGTTACTACTTGATGGCGGATACTGGGGTAATGGAAGGGGAAATATTCTACCCTTTTaGTATTTAGTCTTGACAGCC +
Preference number: 2 (lower is better)
Translates to: FCYNMLLLDGGYWGNGRGNILPF*YLVLTA
Trigger: GGCTGTCAAGACTAAATAGCAAAAGGGTAGAATATT...TCCCCTTCCATTACCCCAGTATCCGCCATCAAGTAGTAACATGTTGTAACAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000190611.9
3UTR-3UTR GCA 90 bp GTATTATTTTCAGGGAAGAAGCTGACCTGGATCAAGAATGTCCTGCTAGACCTTATATACTGGGCCAAGTaGAAACATTTATTACATCCC +
Preference number: 2 (lower is better)
Translates to: VLFSGKKLTWIKNVLLDLIYWAK*KHLLHP
Trigger: GGGATGTAATAAATGTTTGCACTTGGCCCAGTATAT...AAGGTCTAGCAGGACATTCTTGATCCAGGTCAGCTTCTTCCCTGAAAATAATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000190611.9
3UTR CAA 90 bp ATCAAAATATCATTTCAAGAGCAGTCATTCTGGATACCGACGGCTTaGTCAGTGAGTCTTTCATTACACAGAAGAGAAAAACACTTCCCA +
Preference number: 2 (lower is better)
Translates to: IKISFQEQSFWIPTA*SVSLSLHRREKHFP
Trigger: TGGGAAGTGTTTTTCTCTTCTGTGTAATGAAAGACTCACTGACAAAGCCGTCGGTATCCAGAATGACTGCTCTTGAAATGATATTTTGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000190611.9
3UTR-3UTR CCA 90 bp AGGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCACAGAATGTGATATGTTaGCTAGCTCTACATTCCCAG +
Preference number: 2 (lower is better)
Translates to: RFSVDPETTHSYKKHNCAQNVIC*LALHSQ
Trigger: CTGGGAATGTAGAGCTAGCCAACATATCACATTCTG...TGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
3UTR-3UTR CCA 90 bp GGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATCAGAATGTGATATGTTaGCTAGCTCTACATTCCCAG +
Preference number: 2 (lower is better)
Translates to: GFQLTQKPHIAIRNIIVHQNVIC*LALHSQ
Trigger: CTGGGAATGTAGAGCTAGCCAACATATCACATTCTG...ATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
3UTR-3UTR CCA 90 bp AATATTCCTCTCTCTACAATTGCCCTCACTTCTATTTGGGAGGAAGGAATGGCTCTTATGAATAAACCATaGGAGAAGTATACAGGCATA +
Preference number: 2 (lower is better)
Translates to: NIPLSTIALTSIWEEGMALMNKP*EKYTGI
Trigger: TATGCCTGTATACTTCTCCCATGGTTTATTCATAAG...AGCCATTCCTTCCTCCCAAATAGAAGTGAGGGCAATTGTAGAGAGAGGAATATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000190611.9
3UTR CAA 90 bp TTCTTGGCTTTGAAGAGTAAACTTCTGGTTATCTGGCTGGTTAGATaGCCTCTAGGAATGTATTTTTACGTTCTCCGGTTTAGCAAAAAT +
Preference number: 2 (lower is better)
Translates to: FLALKSKLLVIWLVR*PLGMYFYVLRFSKN
Trigger: ATTTTTGCTAAACCGGAGAACGTAAAAATACATTCCTAGAGGCAATCTAACCAGCCAGATAACCAGAAGTTTACTCTTCAAAGCCAAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000190611.9
3UTR-3UTR CCA 90 bp TTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGTCAGAATGTGATATGTTaGCTAGCTCTACATTCCCAG +
Preference number: 2 (lower is better)
Translates to: FQLTQKPHIAIRNIIVHSQNVIC*LALHSQ
Trigger: CTGGGAATGTAGAGCTAGCCAACATATCACATTCTG...ACTATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
3UTR GCA 72 bp GTCTGCACTGACCGACTGCTTGTGGCCCAGGAGTCCTaGGATAGGGGATGGTGCTTCCAGACAGTGGAACAA +
Preference number: 3 (lower is better)
Translates to: VCTDRLLVAQES*DRGWCFQTVEQ
Trigger: TTGTTCCACTGTCTGGAAGCACCATCCCCTATCGCAGGACTCCTGGGCCACAAGCAGTCGGTCAGTGCAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
3UTR CCA 72 bp CAGACACACTTGAAGTCTGCACTGACCGACTGCTTGTaGCCCAGGAGTCCTGCGATAGGGGATGGTGCTTCC +
Preference number: 3 (lower is better)
Translates to: QTHLKSALTDCL*PRSPAIGDGAS
Trigger: GGAAGCACCATCCCCTATCGCAGGACTCCTGGGCCACAAGCAGTCGGTCAGTGCAGACTTCAAGTGTGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
3UTR CCA 72 bp CGACTGCTTGTGGCCCAGGAGTCCTGCGATAGGGGATaGTGCTTCCAGACAGTGGAACAATCGTGTGGTTTC +
Preference number: 3 (lower is better)
Translates to: RLLVAQESCDRG*CFQTVEQSCGF
Trigger: GAAACCACACGATTGTTCCACTGTCTGGAAGCACCATCCCCTATCGCAGGACTCCTGGGCCACAAGCAGTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
3UTR GCA 72 bp CTGCTTGTGGCCCAGGAGTCCTGCGATAGGGGATGGTaGTTCCAGACAGTGGAACAATCGTGTGGTTTCTAT +
Preference number: 3 (lower is better)
Translates to: LLVAQESCDRGW*FQTVEQSCGFY
Trigger: ATAGAAACCACACGATTGTTCCACTGTCTGGAAGCACCATCCCCTATCGCAGGACTCCTGGGCCACAAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
3UTR GCA 72 bp ATCAAACAGACACACTTGAAGTCTGCACTGACCGACTaGTTGTGGCCCAGGAGTCCTGCGATAGGGGATGGT +
Preference number: 3 (lower is better)
Translates to: IKQTHLKSALTD*LWPRSPAIGDG
Trigger: ACCATCCCCTATCGCAGGACTCCTGGGCCACAAGCAGTCGGTCAGTGCAGACTTCAAGTGTGTCTGTTTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
3UTR TCA 72 bp TTCTGGTCAGCCTCTACCAGTGCTGGTGTGTGCCATTaGTCCGCTCAGTCTAGCCAAGTCCTCAGAATCATC +
Preference number: 3 (lower is better)
Translates to: FWSASTSAGVCH*SAQSSQVLRII
Trigger: GATGATTCTGAGGACTTGGCTAGACTGAGCGGATCAATGGCACACACCAGCACTGGTAGAGGCTGACCAGAA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
3UTR TCA 72 bp CCCAAGCCACTGCTCCTTGGGGCAGGATCTAATAATTaGTTAGTGGGGTTGCTGAAAGGCCTAGGGCCAGAA +
Preference number: 3 (lower is better)
Translates to: PKPLLLGAGSNN*LVGLLKGLGPE
Trigger: TTCTGGCCCTAGGCCTTTCAGCAACCCCACTAATCAATTATTAGATCCTGCCCCAAGGAGCAGTGGCTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
3UTR GCA 72 bp ACAATCACACCACATCAAACAGACACACTTGAAGTCTaGACTGACCGACTGCTTGTGGCCCAGGAGTCCTGC +
Preference number: 3 (lower is better)
Translates to: TITPHQTDTLEV*TDRLLVAQESC
Trigger: GCAGGACTCCTGGGCCACAAGCAGTCGGTCAGTGCAGACTTCAAGTGTGTCTGTTTGATGTGGTGTGATTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
3UTR TCA 72 bp TTAAAATGTCCCGGGGGCAGAGGGTGCTTGTTACAATaGGGATTCTCGGTCCACACCCTAGATCTGTGGACT +
Preference number: 3 (lower is better)
Translates to: LKCPGGRGCLLQ*GFSVHTLDLWT
Trigger: AGTCCACAGATCTAGGGTGTGGACCGAGAATCCTCATTGTAACAAGCACCCTCTGCCCCCGGGACATTTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000190611.9
3UTR-3UTR CAA 90 bp TTCCCTGATGGGTCCTGGATCCTCTTCCAGCTACCTGATACCACATCTGATGGTAAGTGGTTAGGGGCCTaGTCTAATGCACTTCTGAAA +
Preference number: 3 (lower is better)
Translates to: FPDGSWILFQLPDTTSDGKWLGA*SNALLK
Trigger: TTTCAGAAGTGCATTAGACAAGGCCCCTAACCACTT...ACCATCAGATGTGGTATCAGGTAGCTGGAAGAGGATCCAGGACCCATCAGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
3UTR CCA 72 bp ATTGCTAAGTACAGTCGTTGCTTCCCTGATGGGTCCTaGATCCTCTTCCAGCTACCTGATACCACATCTGAT +
Preference number: 3 (lower is better)
Translates to: IAKYSRCFPDGS*ILFQLPDTTSD
Trigger: ATCAGATGTGGTATCAGGTAGCTGGAAGAGGATCCAGGACCCATCAGGGAAGCAACGACTGTACTTAGCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
3UTR CCA 72 bp TATACTGGGCCAAGTGCAAACATTTATTACATCCCCTaGTGTGTGCAGAGCTCTGCTCCCACAAACACCTCA +
Preference number: 3 (lower is better)
Translates to: YTGPSANIYYIP*CVQSSAPTNTS
Trigger: TGAGGTGTTTGTGGGAGCAGAGCTCTGCACACACCAGGGGATGTAATAAATGTTTGCACTTGGCCCAGTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
3UTR-3UTR CAA 90 bp TTCCCTGATGGGTCCTGGATCCTCTTCCAGCTACCTGATACCACATCTGATGGTTCAGAATGTGATATGTaGGCTAGCTCTACATTCCCA +
Preference number: 3 (lower is better)
Translates to: FPDGSWILFQLPDTTSDGSECDM*ASSTFP
Trigger: TGGGAATGTAGAGCTAGCCAACATATCACATTCTGA...ACCATCAGATGTGGTATCAGGTAGCTGGAAGAGGATCCAGGACCCATCAGGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
3UTR-3UTR CAA 90 bp TTCCCTGATGGGTCCTGGATCCTCTTCCAGCTACCTGATACCACATCTGATGGTTTCTGCTTTCCTGCTTaGGGATGGATACATTCCTTA +
Preference number: 3 (lower is better)
Translates to: FPDGSWILFQLPDTTSDGFCFPA*GWIHSL
Trigger: TAAGGAATGTATCCATCCCAAAGCAGGAAAGCAGAA...ACCATCAGATGTGGTATCAGGTAGCTGGAAGAGGATCCAGGACCCATCAGGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
3UTR-3UTR CAA 90 bp ATATACTGGGCCAAGTGCAAACATTTATTACATCCCCTGGTGTGTGCAGAGCTCATCAAACAGACACACTaGAAGTCTGCACTGACCGAC +
Preference number: 3 (lower is better)
Translates to: IYWAKCKHLLHPLVCAELIKQTH*KSALTD
Trigger: GTCGGTCAGTGCAGACTTCAAGTGTGTCTGTTTGAT...GAGCTCTGCACACACCAGGGGATGTAATAAATGTTTGCACTTGGCCCAGTATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
3UTR TCA 72 bp GGAATTCGACTAGTGTCAGTGGAGCGGGCATGGGATTaGGACATGGATTACATGGTGCTTCACTCAAAAACA +
Preference number: 3 (lower is better)
Translates to: GIRLVSVERAWD*DMDYMVLHSKT
Trigger: TGTTTTTGAGTGAAGCACCATGTAATCCATGTCTCAATCCCATGCCCGCTCCACTGACACTAGTCGAATTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
3UTR TCA 72 bp CATCTTGAAGTCCTCATCAGAGTGTCAGGCTACCTCTaGCCAACATTCACTCACCTGATTTGTACCATGACC +
Preference number: 3 (lower is better)
Translates to: HLEVLIRVSGYL*PTFTHLICTMT
Trigger: GGTCATGGTACAAATCAGGTGAGTGAATGTTGGTCAGAGGTAGCCTGACACTCTGATGAGGACTTCAAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
3UTR GCA 72 bp GGCCAAGTGCAAACATTTATTACATCCCCTGGTGTGTaGAGAGCTCTGCTCCCACAAACACCTCATTATCTA +
Preference number: 3 (lower is better)
Translates to: GQVQTFITSPGV*RALLPQTPHYL
Trigger: TAGATAATGAGGTGTTTGTGGGAGCAGAGCTCTGCACACACCAGGGGATGTAATAAATGTTTGCACTTGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
3UTR CCA 72 bp AGGAGTCCTGCGATAGGGGATGGTGCTTCCAGACAGTaGAACAATCGTGTGGTTTCTATGTTGTTGTTAACT +
Preference number: 3 (lower is better)
Translates to: RSPAIGDGASRQ*NNRVVSMLLLT
Trigger: AGTTAACAACAACATAGAAACCACACGATTGTTCCACTGTCTGGAAGCACCATCCCCTATCGCAGGACTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
3UTR CCA 72 bp CTGTCCTCCCCACTCTTTATCTCCATATTACAGGGCTaGCGTTGGGACAGAAGTCAAGAAAATGACAAAGTG +
Preference number: 3 (lower is better)
Translates to: LSSPLFISILQG*RWDRSQENDKV
Trigger: CACTTTGTCATTTTCTTGACTTCTGTCCCAACGCCAGCCCTGTAATATGGAGATAAAGAGTGGGGAGGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000190611.9
3UTR-3UTR CAA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCATGGTAGGTTTTCAGTaGACCCAGAAACCACACATA +
Preference number: 3 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVMVGFQ*TQKPHI
Trigger: TATGTGTGGTTTCTGGGTCAACTGAAAACCTACCAT...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
3UTR-3UTR CAA 90 bp ATCAAAATATCATTTCAAGAGCAGTCATTCTGGATACCGACGGCTTTGTCAGTGATCAAACAGACACACTaGAAGTCTGCACTGACCGAC +
Preference number: 3 (lower is better)
Translates to: IKISFQEQSFWIPTALSVIKQTH*KSALTD
Trigger: GTCGGTCAGTGCAGACTTCAAGTGTGTCTGTTTGAT...CACTGACAAAGCCGTCGGTATCCAGAATGACTGCTCTTGAAATGATATTTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000190611.9
3UTR GCA 72 bp TTTGTAATTATAACCCAAATTGCTAAGTACAGTCGTTaGTTCCCTGATGGGTCCTGGATCCTCTTCCAGCTA +
Preference number: 3 (lower is better)
Translates to: FVIITQIAKYSR*FPDGSWILFQL
Trigger: TAGCTGGAAGAGGATCCAGGACCCATCAGGGAAGCAACGACTGTACTTAGCAATTTGGGTTATAATTACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
3UTR CCA 72 bp ATTTTTCCAAATAATAGGGCACACTGTGAGGTTAGGTaGAAGAGGGATGGTTTATTATCTGGACGCAGGACA +
Preference number: 3 (lower is better)
Translates to: IFPNNRAHCEVR*KRDGLLSGRRT
Trigger: TGTCCTGCGTCCAGATAATAAACCATCCCTCTTCCACCTAACCTCACAGTGTGCCCTATTATTTGGAAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
3UTR CCA 72 bp CAAATAAACTACTATTATTCTTGCTTCTGTTCTCAGTaGAATTCGACTAGTGTCAGTGGAGCGGGCATGGGA +
Preference number: 3 (lower is better)
Translates to: QINYYYSCFCSQ*NSTSVSGAGMG
Trigger: TCCCATGCCCGCTCCACTGACACTAGTCGAATTCCACTGAGAACAGAAGCAAGAATAATAGTAGTTTATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
3UTR-3UTR CAA 90 bp ATATACTGGGCCAAGTGCAAACATTTATTACATCCCCTGGTGTGTGCAGAGCTCTTTTGCTATTTAGTCTaGACAGCCCAAATACTACGT +
Preference number: 3 (lower is better)
Translates to: IYWAKCKHLLHPLVCAELFCYLV*TAQILR
Trigger: ACGTAGTATTTGGGCTGTCAAGACTAAATAGCAAAA...GAGCTCTGCACACACCAGGGGATGTAATAAATGTTTGCACTTGGCCCAGTATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
3UTR-3UTR CAA 90 bp ATCCCAAAGTGGTTAGGGGCCTTGTCTAATGCACTTCTGAAAGTCCATTATAAATCAGAATGTGATATGTaGGCTAGCTCTACATTCCCA +
Preference number: 3 (lower is better)
Translates to: IPKWLGALSNALLKVHYKSECDM*ASSTFP
Trigger: TGGGAATGTAGAGCTAGCCAACATATCACATTCTGA...TTTATAATGGACTTTCAGAAGTGCATTAGACAAGGCCCCTAACCACTTTGGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
3UTR-3UTR CAA 90 bp TGGACGCAGGACAGGAAATTAACGAGCCACGTAAATACAGAGATCTACTTAGCACGTGTGGTTTCTATGTaGTTGTTAACTTTCTTGATC +
Preference number: 3 (lower is better)
Translates to: WTQDRKLTSHVNTEIYLARVVSM*LLTFLI
Trigger: GATCAAGAAAGTTAACAACAACATAGAAACCACACG...TGCTAAGTAGATCTCTGTATTTACGTGGCTCGTTAATTTCCTGTCCTGCGTCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
3UTR-3UTR CAA 90 bp AGCATCACATCTTTTTCGACAAGGCCAGCACAATCACACCACATCAAACAGACACGTGTGGTTTCTATGTaGTTGTTAACTTTCTTGATC +
Preference number: 3 (lower is better)
Translates to: SITSFSTRPAQSHHIKQTRVVSM*LLTFLI
Trigger: GATCAAGAAAGTTAACAACAACATAGAAACCACACG...TGTCTGTTTGATGTGGTGTGATTGTGCTGGCCTTGTCGAAAAAGATGTGATGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
3UTR-3UTR CAA 90 bp TTCTGTTACAACATGTTACTACTTGATGGCGGATACTGGGGTAATGGAAGGGGATTTTGCTATTTAGTCTaGACAGCCCAAATACTACGT +
Preference number: 3 (lower is better)
Translates to: FCYNMLLLDGGYWGNGRGFCYLV*TAQILR
Trigger: ACGTAGTATTTGGGCTGTCAAGACTAAATAGCAAAA...TCCCCTTCCATTACCCCAGTATCCGCCATCAAGTAGTAACATGTTGTAACAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000190611.9
3UTR-3UTR CAA 90 bp GTATTATTTTCAGGGAAGAAGCTGACCTGGATCAAGAATGTCCTGCTAGACCTTATCTGGCTGGTTAGATaGCCTCTAGGAATGTATTTT +
Preference number: 3 (lower is better)
Translates to: VLFSGKKLTWIKNVLLDLIWLVR*PLGMYF
Trigger: AAAATACATTCCTAGAGGCAATCTAACCAGCCAGAT...AAGGTCTAGCAGGACATTCTTGATCCAGGTCAGCTTCTTCCCTGAAAATAATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000190611.9
3UTR-3UTR CAA 90 bp AACTCAGATGCAAGGGAGGAGTTTTGGATAAATAAAATATTGCGCCATCTAGTGTCAGAATGTGATATGTaGGCTAGCTCTACATTCCCA +
Preference number: 3 (lower is better)
Translates to: NSDAREEFWINKILRHLVSECDM*ASSTFP
Trigger: TGGGAATGTAGAGCTAGCCAACATATCACATTCTGA...CACTAGATGGCGCAATATTTTATTTATCCAAAACTCCTCCCTTGCATCTGAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
3UTR-3UTR CAA 90 bp AGGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATCAGAATGTGATATGTaGGCTAGCTCTACATTCCCA +
Preference number: 3 (lower is better)
Translates to: RFSVDPETTHSYKKHNCASECDM*ASSTFP
Trigger: TGGGAATGTAGAGCTAGCCAACATATCACATTCTGA...TGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
3UTR CCA 72 bp ATCTCCAATGAGATGAAGCAGCTTATGAATAAACCATaGGAGAAGTATACAGGCATATTATGTTCTCCTCTA +
Preference number: 3 (lower is better)
Translates to: ISNEMKQLMNKP*EKYTGILCSPL
Trigger: TAGAGGAGAACATAATATGCCTGTATACTTCTCCCATGGTTTATTCATAAGCTGCTTCATCTCATTGGAGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
3UTR CCA 72 bp ATCATCATCAAAATATCATTTCAAGAGCAGTCATTCTaGATACCGACGGCTTTGTCAGTGAGTCTTTCATTA +
Preference number: 3 (lower is better)
Translates to: IIIKISFQEQSF*IPTALSVSLSL
Trigger: TAATGAAAGACTCACTGACAAAGCCGTCGGTATCCAGAATGACTGCTCTTGAAATGATATTTTGATGATGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR CCA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCGGAGGAGAGGAGGCATaGGCGCCGCCTGCACCGAGC +
Preference number: 4 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVGGEEA*APPAPS
Trigger: GCTCGGTGCAGGCGGCGCCCATGCCTCCTCTCCTCC...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
CDS-3UTR CCA 90 bp TTCCCTGATGGGTCCTGGATCCTCTTCCAGCTACCTGATACCACATCTGATGGTGTCAGGACAAGGAGCTaGCAGGCATGCTCGACGCCC +
Preference number: 4 (lower is better)
Translates to: FPDGSWILFQLPDTTSDGVRTRS*QACSTP
Trigger: GGGCGTCGAGCATGCCTGCCAGCTCCTTGTCCTGAC...ACCATCAGATGTGGTATCAGGTAGCTGGAAGAGGATCCAGGACCCATCAGGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR TCA 90 bp TGCTTCTGTTCTCAGTGGAATTCGACTAGTGTCAGTGGAGCGGGCATGGGATTGGGTGCTGCAGGGTGTTaGGCGGCTCGTTTAGCTCCA +
Preference number: 4 (lower is better)
Translates to: CFCSQWNSTSVSGAGMGLGAAGC*AARLAP
Trigger: TGGAGCTAAACGAGCCGCTCAACACCCTGCAGCACC...CAATCCCATGCCCGCTCCACTGACACTAGTCGAATTCCACTGAGAACAGAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR GCA 90 bp TCTGAGAAGCATCACATCTTTTTCGACAAGGCCAGCACAATCACACCACATCAAGGCATGGGCGCCGCCTaGACCGAGCCGCGATCTCCA +
Preference number: 4 (lower is better)
Translates to: SEKHHIFFDKASTITPHQGMGAA*TEPRSP
Trigger: TGGAGATCGCGGCTCGGTGCAGGCGGCGCCCATGCC...TTGATGTGGTGTGATTGTGCTGGCCTTGTCGAAAAAGATGTGATGCTTCTCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR GCA 90 bp TGCTTCTGTTCTCAGTGGAATTCGACTAGTGTCAGTGGAGCGGGCATGGGATTGGTGGCCCAGGAGTCCTaGGATAGGGGATGGTGCTTC +
Preference number: 4 (lower is better)
Translates to: CFCSQWNSTSVSGAGMGLVAQES*DRGWCF
Trigger: GAAGCACCATCCCCTATCGCAGGACTCCTGGGCCAC...CAATCCCATGCCCGCTCCACTGACACTAGTCGAATTCCACTGAGAACAGAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR GCA 90 bp TTCCCTGATGGGTCCTGGATCCTCTTCCAGCTACCTGATACCACATCTGATGGTCAGCCCCCAAGCCACTaGTCCTTGGGGCAGGATCTA +
Preference number: 4 (lower is better)
Translates to: FPDGSWILFQLPDTTSDGQPPSH*SLGQDL
Trigger: TAGATCCTGCCCCAAGGAGCAGTGGCTTGGGGGCTG...ACCATCAGATGTGGTATCAGGTAGCTGGAAGAGGATCCAGGACCCATCAGGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CCA 90 bp GAAGATTTTACTGCCGCAGGGCAAGCCACCTATGGATTTAAAATGGGAATGAGAGGAGGAGAGGAGGCATaGGCGCCGCCTGCACCGAGC +
Preference number: 4 (lower is better)
Translates to: EDFTAAGQATYGFKMGMRGGEEA*APPAPS
Trigger: GCTCGGTGCAGGCGGCGCCCATGCCTCCTCTCCTCC...TCTCATTCCCATTTTAAATCCATAGGTGGCTTGCCCTGCGGCAGTAAAATCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CCA 90 bp ATATACTGGGCCAAGTGCAAACATTTATTACATCCCCTGGTGTGTGCAGAGCTCGCAAGTGGCAGAACCTaGAGGGCGAGCGGTGGCGCC +
Preference number: 4 (lower is better)
Translates to: IYWAKCKHLLHPLVCAELASGRT*RASGGA
Trigger: GGCGCCACCGCTCGCCCTCCAGGTTCTGCCACTTGC...GAGCTCTGCACACACCAGGGGATGTAATAAATGTTTGCACTTGGCCCAGTATAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
3UTR CAA 72 bp AAACAGACACACTTGAAGTCTGCACTGACCGACTGCTaGTGGCCCAGGAGTCCTGCGATAGGGGATGGTGCT +
Preference number: 4 (lower is better)
Translates to: KQTHLKSALTDC*WPRSPAIGDGA
Trigger: AGCACCATCCCCTATCGCAGGACTCCTGGGCCACAAGCAGTCGGTCAGTGCAGACTTCAAGTGTGTCTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR GCA 90 bp TTCCCTGATGGGTCCTGGATCCTCTTCCAGCTACCTGATACCACATCTGATGGTTCTGCACTGACCGACTaGTTGTGGCCCAGGAGTCCT +
Preference number: 4 (lower is better)
Translates to: FPDGSWILFQLPDTTSDGSALTD*LWPRSP
Trigger: AGGACTCCTGGGCCACAAGCAGTCGGTCAGTGCAGA...ACCATCAGATGTGGTATCAGGTAGCTGGAAGAGGATCCAGGACCCATCAGGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR GCA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCCTGGGAGGCGGAGGCTaGAGTGAGCCGAGATTGTGC +
Preference number: 4 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVLGGGG*SEPRLC
Trigger: GCACAATCTCGGCTCACTGCAGCCTCCGCCTCCCAG...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR CCA 90 bp TGGACGCAGGACAGGAAATTAACGAGCCACGTAAATACAGAGATCTACTTAGCAGCAAGTGGCAGAACCTaGAGGGCGAGCGGTGGCGCC +
Preference number: 4 (lower is better)
Translates to: WTQDRKLTSHVNTEIYLAASGRT*RASGGA
Trigger: GGCGCCACCGCTCGCCCTCCAGGTTCTGCCACTTGC...TGCTAAGTAGATCTCTGTATTTACGTGGCTCGTTAATTTCCTGTCCTGCGTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CCA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCGTCAGGACAAGGAGCTaGCAGGCATGCTCGACGCCC +
Preference number: 4 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVVRTRS*QACSTP
Trigger: GGGCGTCGAGCATGCCTGCCAGCTCCTTGTCCTGAC...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CCA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCCGAGTTGTGCTGAACTaGCCCTTCGCGGGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVRVVLN*PFAGGP
Trigger: AGGGCCACCCGCGAAGGGCCAGTTCAGCACAACTCG...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392505.6
3UTR CAA 72 bp AGGCCAGCACAATCACACCACATCAAACAGACACACTaGAAGTCTGCACTGACCGACTGCTTGTGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: RPAQSHHIKQTH*KSALTDCLWPR
Trigger: CCTGGGCCACAAGCAGTCGGTCAGTGCAGACTTCAAGTGTGTCTGTTTGATGTGGTGTGATTGTGCTGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR TCA 90 bp TTCCCTGATGGGTCCTGGATCCTCTTCCAGCTACCTGATACCACATCTGATGGTCCCCAAGGACTGGGTTaGATGGCTTACTTCCTGCTC +
Preference number: 4 (lower is better)
Translates to: FPDGSWILFQLPDTTSDGPQGLG*MAYFLL
Trigger: GAGCAGGAAGTAAGCCATTCAACCCAGTCCTTGGGG...ACCATCAGATGTGGTATCAGGTAGCTGGAAGAGGATCCAGGACCCATCAGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR TCA 90 bp TGCTTCTGTTCTCAGTGGAATTCGACTAGTGTCAGTGGAGCGGGCATGGGATTGCAGTCGTTGCTTCCCTaGTGGGTCCTGGATCCTCTT +
Preference number: 4 (lower is better)
Translates to: CFCSQWNSTSVSGAGMGLQSLLP*WVLDPL
Trigger: AAGAGGATCCAGGACCCATCAGGGAAGCAACGACTG...CAATCCCATGCCCGCTCCACTGACACTAGTCGAATTCCACTGAGAACAGAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR TCA 90 bp TTCCCTGATGGGTCCTGGATCCTCTTCCAGCTACCTGATACCACATCTGATGGTGCTGGTGTGTGCCATTaGTCCGCTCAGTCTAGCCAA +
Preference number: 4 (lower is better)
Translates to: FPDGSWILFQLPDTTSDGAGVCH*SAQSSQ
Trigger: TTGGCTAGACTGAGCGGATCAATGGCACACACCAGC...ACCATCAGATGTGGTATCAGGTAGCTGGAAGAGGATCCAGGACCCATCAGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR TCA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCACCAGCCTGAGACAGTaGCTGTCGGAGCCGTGCCAT +
Preference number: 4 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVTSLRQ*LSEPCH
Trigger: ATGGCACGGCTCCGACAGTCACTGTCTCAGGCTGGT...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359685.7
ENST00000409631.5
CDS-3UTR GCA 90 bp ATCCCAAAGTGGTTAGGGGCCTTGTCTAATGCACTTCTGAAAGTCCATTATAAAGGCATGGGCGCCGCCTaGACCGAGCCGCGATCTCCA +
Preference number: 4 (lower is better)
Translates to: IPKWLGALSNALLKVHYKGMGAA*TEPRSP
Trigger: TGGAGATCGCGGCTCGGTGCAGGCGGCGCCCATGCC...TTTATAATGGACTTTCAGAAGTGCATTAGACAAGGCCCCTAACCACTTTGGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
CDS-3UTR GCA 90 bp TGCTTCTGTTCTCAGTGGAATTCGACTAGTGTCAGTGGAGCGGGCATGGGATTGCAGGGAGGCTATTGCTaGATGGTAAAGGGGACTGCC +
Preference number: 4 (lower is better)
Translates to: CFCSQWNSTSVSGAGMGLQGGYC*MVKGTA
Trigger: GGCAGTCCCCTTTACCATGCAGCAATAGCCTCCCTG...CAATCCCATGCCCGCTCCACTGACACTAGTCGAATTCCACTGAGAACAGAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR TCA 90 bp TTCCCTGATGGGTCCTGGATCCTCTTCCAGCTACCTGATACCACATCTGATGGTGTGTCAGGCTACCTCTaGCCAACATTCACTCACCTG +
Preference number: 4 (lower is better)
Translates to: FPDGSWILFQLPDTTSDGVSGYL*PTFTHL
Trigger: CAGGTGAGTGAATGTTGGTCAGAGGTAGCCTGACAC...ACCATCAGATGTGGTATCAGGTAGCTGGAAGAGGATCCAGGACCCATCAGGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR GCA 90 bp TTCCCTGATGGGTCCTGGATCCTCTTCCAGCTACCTGATACCACATCTGATGGTAACCTGGTCTCCAAATaGACTTTGCAGAGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: FPDGSWILFQLPDTTSDGNLVSK*TLQRGP
Trigger: TGGCCCCCTCTGCAAAGTGCATTTGGAGACCAGGTT...ACCATCAGATGTGGTATCAGGTAGCTGGAAGAGGATCCAGGACCCATCAGGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR GCA 90 bp ATATACTGGGCCAAGTGCAAACATTTATTACATCCCCTGGTGTGTGCAGAGCTCCAGCCCCCAAGCCACTaGTCCTTGGGGCAGGATCTA +
Preference number: 4 (lower is better)
Translates to: IYWAKCKHLLHPLVCAELQPPSH*SLGQDL
Trigger: TAGATCCTGCCCCAAGGAGCAGTGGCTTGGGGGCTG...GAGCTCTGCACACACCAGGGGATGTAATAAATGTTTGCACTTGGCCCAGTATAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CCA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCCTGACCGACTGCTTGTaGCCCAGGAGTCCTGCGATA +
Preference number: 4 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVLTDCL*PRSPAI
Trigger: TATCGCAGGACTCCTGGGCCACAAGCAGTCGGTCAG...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CCA 90 bp TTCCCTGATGGGTCCTGGATCCTCTTCCAGCTACCTGATACCACATCTGATGGTTTCCCTGATGGGTCCTaGATCCTCTTCCAGCTACCT +
Preference number: 4 (lower is better)
Translates to: FPDGSWILFQLPDTTSDGFPDGS*ILFQLP
Trigger: AGGTAGCTGGAAGAGGATCCAGGACCCATCAGGGAA...ACCATCAGATGTGGTATCAGGTAGCTGGAAGAGGATCCAGGACCCATCAGGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR TCA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCCCCCAAGGACTGGGTTaGATGGCTTACTTCCTGCTC +
Preference number: 4 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVPQGLG*MAYFLL
Trigger: GAGCAGGAAGTAAGCCATTCAACCCAGTCCTTGGGG...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR TCA 90 bp AATATTCCTCTCTCTACAATTGCCCTCACTTCTATTTGGGAGGAAGGAATGGCTACCGCCTTCCCCTCCTaGTCTATCACCACCCCCTGG +
Preference number: 4 (lower is better)
Translates to: NIPLSTIALTSIWEEGMATAFPS*SITTPW
Trigger: CCAGGGGGTGGTGATAGATCAGGAGGGGAAGGCGGT...AGCCATTCCTTCCTCCCAAATAGAAGTGAGGGCAATTGTAGAGAGAGGAATATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR TCA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCATTTGCTCACCAGCCTaGGACAGTGACTGTCGGAGC +
Preference number: 4 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVICSPA*DSDCRS
Trigger: GCTCCGACAGTCACTGTCTCAGGCTGGTGAGCAAAT...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359685.7
ENST00000409631.5
CDS-3UTR GCA 90 bp TGCTTCTGTTCTCAGTGGAATTCGACTAGTGTCAGTGGAGCGGGCATGGGATTGCATGGTAAAGGGGACTaGCACGGAAAGCTGTTTGGT +
Preference number: 4 (lower is better)
Translates to: CFCSQWNSTSVSGAGMGLHGKGD*HGKLFG
Trigger: ACCAAACAGCTTTCCGTGGCAGTCCCCTTTACCATG...CAATCCCATGCCCGCTCCACTGACACTAGTCGAATTCCACTGAGAACAGAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR GCA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCCAGGGAGGCTATTGCTaGATGGTAAAGGGGACTGCC +
Preference number: 4 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVQGGYC*MVKGTA
Trigger: GGCAGTCCCCTTTACCATGCAGCAATAGCCTCCCTG...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR GCA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCGCCAGTTGTGCACGTTaGAGGGAGGCTATTGCTGCA +
Preference number: 4 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVASCAR*REAIAA
Trigger: TGCAGCAATAGCCTCCCTGCAACGTGCACAACTGGC...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR GCA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCGCCGTGCCATCTGCGTaGTGTGGCCTTTACTGTGAT +
Preference number: 4 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVAVPSA*CGLYCD
Trigger: ATCACAGTAAAGGCCACAGCACGCAGATGGCACGGC...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR GCA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCATTTCCTCACAGAGGTaGTGCAGGGTGTTGAGCGGC +
Preference number: 4 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVISSQR*CRVLSG
Trigger: GCCGCTCAACACCCTGCAGCACCTCTGTGAGGAAAT...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR GCA 90 bp TGCTTCTGTTCTCAGTGGAATTCGACTAGTGTCAGTGGAGCGGGCATGGGATTGCGGCAACGAGAACCATaGGCTCATATGGATCATCAG +
Preference number: 4 (lower is better)
Translates to: CFCSQWNSTSVSGAGMGLRQREP*AHMDHQ
Trigger: CTGATGATCCATATGAGCGCATGGTTCTCGTTGCCG...CAATCCCATGCCCGCTCCACTGACACTAGTCGAATTCCACTGAGAACAGAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR GCA 90 bp GAAGATTTTACTGCCGCAGGGCAAGCCACCTATGGATTTAAAATGGGAATGAGAGTGGCCCAGGAGTCCTaGGATAGGGGATGGTGCTTC +
Preference number: 4 (lower is better)
Translates to: EDFTAAGQATYGFKMGMRVAQES*DRGWCF
Trigger: GAAGCACCATCCCCTATCGCAGGACTCCTGGGCCAC...TCTCATTCCCATTTTAAATCCATAGGTGGCTTGCCCTGCGGCAGTAAAATCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR GCA 90 bp TTCCCTGATGGGTCCTGGATCCTCTTCCAGCTACCTGATACCACATCTGATGGTCTGATGGTCAGCTGCTaGTCCCTTTCCTTCATCTCT +
Preference number: 4 (lower is better)
Translates to: FPDGSWILFQLPDTTSDGLMVSC*SLSFIS
Trigger: AGAGATGAAGGAAAGGGAGCAGCAGCTGACCATCAG...ACCATCAGATGTGGTATCAGGTAGCTGGAAGAGGATCCAGGACCCATCAGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CCA 90 bp TGCTTCTGTTCTCAGTGGAATTCGACTAGTGTCAGTGGAGCGGGCATGGGATTGCTTGCTGGGGCTATCTaGGTAAATTATAGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: CFCSQWNSTSVSGAGMGLLAGAI*VNYRGG
Trigger: GCCACCCCTATAATTTACCCAGATAGCCCCAGCAAG...CAATCCCATGCCCGCTCCACTGACACTAGTCGAATTCCACTGAGAACAGAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CCA 90 bp TCTGAGAAGCATCACATCTTTTTCGACAAGGCCAGCACAATCACACCACATCAAAGCTGTCAGCTTCCTTaGAGAGGGGGACTGGCTCCG +
Preference number: 4 (lower is better)
Translates to: SEKHHIFFDKASTITPHQSCQLP*RGGLAP
Trigger: CGGAGCCAGTCCCCCTCTCCAAGGAAGCTGACAGCT...TTGATGTGGTGTGATTGTGCTGGCCTTGTCGAAAAAGATGTGATGCTTCTCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CCA 90 bp TTCCCTGATGGGTCCTGGATCCTCTTCCAGCTACCTGATACCACATCTGATGGTCAAAAATCTTTGATCTaGCCGGAACCGGGCGTCTGT +
Preference number: 4 (lower is better)
Translates to: FPDGSWILFQLPDTTSDGQKSLI*PEPGVC
Trigger: ACAGACGCCCGGTTCCGGCCAGATCAAAGATTTTTG...ACCATCAGATGTGGTATCAGGTAGCTGGAAGAGGATCCAGGACCCATCAGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR TCA 90 bp TTCCCTGATGGGTCCTGGATCCTCTTCCAGCTACCTGATACCACATCTGATGGTTTCTCCATCGTCTTGTaGCCCGCTTGTCTTTCTTTG +
Preference number: 4 (lower is better)
Translates to: FPDGSWILFQLPDTTSDGFSIVL*PACLSL
Trigger: CAAAGAAAGACAAGCGGGTCACAAGACGATGGAGAA...ACCATCAGATGTGGTATCAGGTAGCTGGAAGAGGATCCAGGACCCATCAGGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR TCA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCGGTGGAGCAGTATCCTaGAACTGCAAATGCGGCAAC +
Preference number: 4 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVGGAVS*NCKCGN
Trigger: GTTGCCGCATTTGCAGTTTCAGGATACTGCTCCACC...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR TCA 90 bp TGCTTCTGTTCTCAGTGGAATTCGACTAGTGTCAGTGGAGCGGGCATGGGATTGTCCATCTTCTCCCACTaGGGATGTTGTGTATGCAAG +
Preference number: 4 (lower is better)
Translates to: CFCSQWNSTSVSGAGMGLSIFSH*GCCVCK
Trigger: CTTGCATACACAACATCCTCAGTGGGAGAAGATGGA...CAATCCCATGCCCGCTCCACTGACACTAGTCGAATTCCACTGAGAACAGAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR TCA 90 bp ATCCCAAAGTGGTTAGGGGCCTTGTCTAATGCACTTCTGAAAGTCCATTATAAAACCGCCTTCCCCTCCTaGTCTATCACCACCCCCTGG +
Preference number: 4 (lower is better)
Translates to: IPKWLGALSNALLKVHYKTAFPS*SITTPW
Trigger: CCAGGGGGTGGTGATAGATCAGGAGGGGAAGGCGGT...TTTATAATGGACTTTCAGAAGTGCATTAGACAAGGCCCCTAACCACTTTGGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR TCA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCTCTTCCAAAAATCTTTaGTCTGGCCGGAACCGGGCG +
Preference number: 4 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVSSKNL*SGRNRA
Trigger: CGCCCGGTTCCGGCCAGATCAAAGATTTTTGGAAGA...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR TCA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCGAGCGGGCATGGGATTaGGACATGGATTACATGGTG +
Preference number: 4 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVERAWD*DMDYMV
Trigger: CACCATGTAATCCATGTCTCAATCCCATGCCCGCTC...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR TCA 90 bp AATATTCCTCTCTCTACAATTGCCCTCACTTCTATTTGGGAGGAAGGAATGGCTGCGCTCCAGCCTGGGTaGCAGAGCACTCAAGACTCT +
Preference number: 4 (lower is better)
Translates to: NIPLSTIALTSIWEEGMAALQPG*QSTQDS
Trigger: AGAGTCTTGAGTGCTCTGTCACCCAGGCTGGAGCGC...AGCCATTCCTTCCTCCCAAATAGAAGTGAGGGCAATTGTAGAGAGAGGAATATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR GCA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCTCCGGTTCTAGCAATTaGCGACTTACAGAGGGCTCG +
Preference number: 4 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVSGSSN*RLTEGS
Trigger: CGAGCCCTCTGTAAGTCGGCAATTGCTAGAACCGGA...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR GCA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCTACTCTGGCCAGTTGTaGACGTTGCAGGGAGGCTAT +
Preference number: 4 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVYSGQL*TLQGGY
Trigger: ATAGCCTCCCTGCAACGTGCACAACTGGCCAGAGTA...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CCA 90 bp TTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGTGGAGGAGAGGAGGCATaGGCGCCGCCTGCACCGAGC +
Preference number: 4 (lower is better)
Translates to: FQLTQKPHIAIRNIIVHSGGEEA*APPAPS
Trigger: GCTCGGTGCAGGCGGCGCCCATGCCTCCTCTCCTCC...ACTATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
CDS-3UTR CCA 90 bp TTCCCTGATGGGTCCTGGATCCTCTTCCAGCTACCTGATACCACATCTGATGGTGATGATGTCGCAGTTTaGAGACCCATGCATCAAACC +
Preference number: 4 (lower is better)
Translates to: FPDGSWILFQLPDTTSDGDDVAV*RPMHQT
Trigger: GGTTTGATGCATGGGTCTCCAAACTGCGACATCATC...ACCATCAGATGTGGTATCAGGTAGCTGGAAGAGGATCCAGGACCCATCAGGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CCA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCGCTGCCACTTTACTCTaGCCAGTTGTGCACGTTGCA +
Preference number: 4 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVAATLL*PVVHVA
Trigger: TGCAACGTGCACAACTGGCCAGAGTAAAGTGGCAGC...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CCA 90 bp GAAGATTTTACTGCCGCAGGGCAAGCCACCTATGGATTTAAAATGGGAATGAGACTGACCGACTGCTTGTaGCCCAGGAGTCCTGCGATA +
Preference number: 4 (lower is better)
Translates to: EDFTAAGQATYGFKMGMRLTDCL*PRSPAI
Trigger: TATCGCAGGACTCCTGGGCCACAAGCAGTCGGTCAG...TCTCATTCCCATTTTAAATCCATAGGTGGCTTGCCCTGCGGCAGTAAAATCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR TCA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCGTCCTCTCCAGTATGTaGATACTCTGCCTACTGTCC +
Preference number: 4 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVVLSSM*ILCLLS
Trigger: GGACAGTAGGCAGAGTATTCACATACTGGAGAGGAC...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR TCA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCAACATTAGCAGCTGGTaGGGATTCAGCTGTGGACGT +
Preference number: 4 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVNISSW*GFSCGR
Trigger: ACGTCCACAGCTGAATCCTCACCAGCTGCTAATGTT...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR TCA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCATGCAAGCGAACTGGTaGCATGGTAGCACTGAAAGG +
Preference number: 4 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVMQANW*HGSTER
Trigger: CCTTTCAGTGCTACCATGTCACCAGTTCGCTTGCAT...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR TCA 90 bp ATCCCAAAGTGGTTAGGGGCCTTGTCTAATGCACTTCTGAAAGTCCATTATAAAGAGTGCCTGAGACAGTaGCTGTCGGAGCCGTGCCAT +
Preference number: 4 (lower is better)
Translates to: IPKWLGALSNALLKVHYKECLRQ*LSEPCH
Trigger: ATGGCACGGCTCCGACAGTCACTGTCTCAGGCACTC...TTTATAATGGACTTTCAGAAGTGCATTAGACAAGGCCCCTAACCACTTTGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000190611.9
ENST00000392505.6
ENST00000409045.7
CDS-3UTR TCA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCGTTCAGCATTCTGGTTaGGTGCCTGAGACAGTGACT +
Preference number: 4 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVVQHSG*VPETVT
Trigger: AGTCACTGTCTCAGGCACTCAACCAGAATGCTGAAC...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000190611.9
ENST00000392505.6
ENST00000409045.7
CDS-3UTR TCA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCGTGATAAGGGGAGACTaGCATGGATTTGCTCACCAG +
Preference number: 4 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVVIRGD*HGFAHQ
Trigger: CTGGTGAGCAAATCCATGTCAGTCTCCCCTTATCAC...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR TCA 90 bp GAAGATTTTACTGCCGCAGGGCAAGCCACCTATGGATTTAAAATGGGAATGAGACTCAGAAACAGACTCTaGCATGGAGAGGCGGCTCTC +
Preference number: 4 (lower is better)
Translates to: EDFTAAGQATYGFKMGMRLRNRL*HGEAAL
Trigger: GAGAGCCGCCTCTCCATGTCAGAGTCTGTTTCTGAG...TCTCATTCCCATTTTAAATCCATAGGTGGCTTGCCCTGCGGCAGTAAAATCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR TCA 90 bp TGGACGCAGGACAGGAAATTAACGAGCCACGTAAATACAGAGATCTACTTAGCACTCAGAAACAGACTCTaGCATGGAGAGGCGGCTCTC +
Preference number: 4 (lower is better)
Translates to: WTQDRKLTSHVNTEIYLALRNRL*HGEAAL
Trigger: GAGAGCCGCCTCTCCATGTCAGAGTCTGTTTCTGAG...TGCTAAGTAGATCTCTGTATTTACGTGGCTCGTTAATTTCCTGTCCTGCGTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR TCA 90 bp ATCCCAAAGTGGTTAGGGGCCTTGTCTAATGCACTTCTGAAAGTCCATTATAAAGGTGCTGCAGGGTGTTaGGCGGCTCGTTTAGCTCCA +
Preference number: 4 (lower is better)
Translates to: IPKWLGALSNALLKVHYKGAAGC*AARLAP
Trigger: TGGAGCTAAACGAGCCGCTCAACACCCTGCAGCACC...TTTATAATGGACTTTCAGAAGTGCATTAGACAAGGCCCCTAACCACTTTGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR TCA 90 bp TGCTTCTGTTCTCAGTGGAATTCGACTAGTGTCAGTGGAGCGGGCATGGGATTGTTCTTTGATTCACAGTaGCAGGCAGAAATGGGTGGA +
Preference number: 4 (lower is better)
Translates to: CFCSQWNSTSVSGAGMGLFFDSQ*QAEMGG
Trigger: TCCACCCATTTCTGCCTGTCACTGTGAATCAAAGAA...CAATCCCATGCCCGCTCCACTGACACTAGTCGAATTCCACTGAGAACAGAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR TCA 90 bp TGCTTCTGTTCTCAGTGGAATTCGACTAGTGTCAGTGGAGCGGGCATGGGATTGAGGCCATCGCACCAATaGATATTCCACAGGAGATAT +
Preference number: 4 (lower is better)
Translates to: CFCSQWNSTSVSGAGMGLRPSHQ*IFHRRY
Trigger: ATATCTCCTGTGGAATATTCATTGGTGCGATGGCCT...CAATCCCATGCCCGCTCCACTGACACTAGTCGAATTCCACTGAGAACAGAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR TCA 90 bp TCTGAGAAGCATCACATCTTTTTCGACAAGGCCAGCACAATCACACCACATCAAGCTGGTGTGTGCCATTaGTCCGCTCAGTCTAGCCAA +
Preference number: 4 (lower is better)
Translates to: SEKHHIFFDKASTITPHQAGVCH*SAQSSQ
Trigger: TTGGCTAGACTGAGCGGATCAATGGCACACACCAGC...TTGATGTGGTGTGATTGTGCTGGCCTTGTCGAAAAAGATGTGATGCTTCTCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR TCA 90 bp TTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGTGGCGCCGAGTTGTGCTaGACTGGCCCTTCGCGGGTG +
Preference number: 4 (lower is better)
Translates to: FQLTQKPHIAIRNIIVHSGAELC*TGPSRV
Trigger: CACCCGCGAAGGGCCAGTTCAGCACAACTCGGCGCC...ACTATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392505.6
CDS-3UTR TCA 90 bp ATCCCAAAGTGGTTAGGGGCCTTGTCTAATGCACTTCTGAAAGTCCATTATAAAACCAGCCTGAGACAGTaGCTGTCGGAGCCGTGCCAT +
Preference number: 4 (lower is better)
Translates to: IPKWLGALSNALLKVHYKTSLRQ*LSEPCH
Trigger: ATGGCACGGCTCCGACAGTCACTGTCTCAGGCTGGT...TTTATAATGGACTTTCAGAAGTGCATTAGACAAGGCCCCTAACCACTTTGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359685.7
ENST00000409631.5
CDS-3UTR TCA 90 bp GAAGATTTTACTGCCGCAGGGCAAGCCACCTATGGATTTAAAATGGGAATGAGAATTTGCTCACCAGCCTaGGACAGTGACTGTCGGAGC +
Preference number: 4 (lower is better)
Translates to: EDFTAAGQATYGFKMGMRICSPA*DSDCRS
Trigger: GCTCCGACAGTCACTGTCTCAGGCTGGTGAGCAAAT...TCTCATTCCCATTTTAAATCCATAGGTGGCTTGCCCTGCGGCAGTAAAATCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359685.7
CDS-3UTR GCA 90 bp ATATACTGGGCCAAGTGCAAACATTTATTACATCCCCTGGTGTGTGCAGAGCTCTCCGGTTCTAGCAATTaGCGACTTACAGAGGGCTCG +
Preference number: 4 (lower is better)
Translates to: IYWAKCKHLLHPLVCAELSGSSN*RLTEGS
Trigger: CGAGCCCTCTGTAAGTCGGCAATTGCTAGAACCGGA...GAGCTCTGCACACACCAGGGGATGTAATAAATGTTTGCACTTGGCCCAGTATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR GCA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCCAGTTTGGAGACCCATaGATCAAACCAGTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVQFGDP*IKPVLG
Trigger: TCCCAGGACTGGTTTGATGCATGGGTCTCCAAACTG...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR GCA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCTTGCAGGGAGGCTATTaGTGCATGGTAAAGGGGACT +
Preference number: 4 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVLQGGY*CMVKGT
Trigger: AGTCCCCTTTACCATGCAGCAATAGCCTCCCTGCAA...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR GCA 90 bp TGGACGCAGGACAGGAAATTAACGAGCCACGTAAATACAGAGATCTACTTAGCAGCCAGTTGTGCACGTTaGAGGGAGGCTATTGCTGCA +
Preference number: 4 (lower is better)
Translates to: WTQDRKLTSHVNTEIYLAASCAR*REAIAA
Trigger: TGCAGCAATAGCCTCCCTGCAACGTGCACAACTGGC...TGCTAAGTAGATCTCTGTATTTACGTGGCTCGTTAATTTCCTGTCCTGCGTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR GCA 90 bp ATATACTGGGCCAAGTGCAAACATTTATTACATCCCCTGGTGTGTGCAGAGCTCTACTCTGGCCAGTTGTaGACGTTGCAGGGAGGCTAT +
Preference number: 4 (lower is better)
Translates to: IYWAKCKHLLHPLVCAELYSGQL*TLQGGY
Trigger: ATAGCCTCCCTGCAACGTGCACAACTGGCCAGAGTA...GAGCTCTGCACACACCAGGGGATGTAATAAATGTTTGCACTTGGCCCAGTATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR GCA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCAGACTGACATGGATTTaGTCACCAGCCTCATCAGGG +
Preference number: 4 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVRLTWI*SPASSG
Trigger: CCCTGATGAGGCTGGTGAGCAAATCCATGTCAGTCT...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000190611.9
ENST00000392505.6
ENST00000409045.7
CDS-3UTR GCA 90 bp TTCTGTTACAACATGTTACTACTTGATGGCGGATACTGGGGTAATGGAAGGGGAATTTCCTCACAGAGGTaGTGCAGGGTGTTGAGCGGC +
Preference number: 4 (lower is better)
Translates to: FCYNMLLLDGGYWGNGRGISSQR*CRVLSG
Trigger: GCCGCTCAACACCCTGCAGCACCTCTGTGAGGAAAT...TCCCCTTCCATTACCCCAGTATCCGCCATCAAGTAGTAACATGTTGTAACAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR GCA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCCGGCAACGAGAACCATaGGCTCATATGGATCATCAG +
Preference number: 4 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVRQREP*AHMDHQ
Trigger: CTGATGATCCATATGAGCGCATGGTTCTCGTTGCCG...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR GCA 90 bp TTCCCTGATGGGTCCTGGATCCTCTTCCAGCTACCTGATACCACATCTGATGGTGAATGGCTTACTTCCTaGTCTGAAATAGGTGGAGCA +
Preference number: 4 (lower is better)
Translates to: FPDGSWILFQLPDTTSDGEWLTS*SEIGGA
Trigger: TGCTCCACCTATTTCAGAGCAGGAAGTAAGCCATTC...ACCATCAGATGTGGTATCAGGTAGCTGGAAGAGGATCCAGGACCCATCAGGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR GCA 90 bp ATTATCTGGACGCAGGACAGGAAATTAACGAGCCACGTAAATACAGAGATCTACTCTGCACTGACCGACTaGTTGTGGCCCAGGAGTCCT +
Preference number: 4 (lower is better)
Translates to: IIWTQDRKLTSHVNTEIYSALTD*LWPRSP
Trigger: AGGACTCCTGGGCCACAAGCAGTCGGTCAGTGCAGA...GTAGATCTCTGTATTTACGTGGCTCGTTAATTTCCTGTCCTGCGTCCAGATAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR GCA 90 bp ATATACTGGGCCAAGTGCAAACATTTATTACATCCCCTGGTGTGTGCAGAGCTCGCTAAGTACAGTCGTTaGTTCCCTGATGGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: IYWAKCKHLLHPLVCAELAKYSR*FPDGSW
Trigger: CCAGGACCCATCAGGGAAGCAACGACTGTACTTAGC...GAGCTCTGCACACACCAGGGGATGTAATAAATGTTTGCACTTGGCCCAGTATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR GCA 90 bp GAAGATTTTACTGCCGCAGGGCAAGCCACCTATGGATTTAAAATGGGAATGAGAACATCCCCTGGTGTGTaGAGAGCTCTGCTCCCACAA +
Preference number: 4 (lower is better)
Translates to: EDFTAAGQATYGFKMGMRTSPGV*RALLPQ
Trigger: TTGTGGGAGCAGAGCTCTGCACACACCAGGGGATGT...TCTCATTCCCATTTTAAATCCATAGGTGGCTTGCCCTGCGGCAGTAAAATCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR GCA 90 bp ATCCCAAAGTGGTTAGGGGCCTTGTCTAATGCACTTCTGAAAGTCCATTATAAAAGGTGCGCACCACCATaGCCGGCTCAGTTTCCGGTT +
Preference number: 4 (lower is better)
Translates to: IPKWLGALSNALLKVHYKRCAPP*PAQFPV
Trigger: AACCGGAAACTGAGCCGGGCATGGTGGTGCGCACCT...TTTATAATGGACTTTCAGAAGTGCATTAGACAAGGCCCCTAACCACTTTGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR GCA 90 bp TTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGTGCTGCCGCTAGCCTCTaGCGGCGCCGAGTTGTGCTG +
Preference number: 4 (lower is better)
Translates to: FQLTQKPHIAIRNIIVHSAAASL*RRRVVL
Trigger: CAGCACAACTCGGCGCCGGCAGAGGCTAGCGGCAGC...ACTATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392505.6
CDS-3UTR CCA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCCTTGCTGGGGCTATCTaGGTAAATTATAGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVLAGAI*VNYRGG
Trigger: GCCACCCCTATAATTTACCCAGATAGCCCCAGCAAG...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CCA 90 bp TGCTTCTGTTCTCAGTGGAATTCGACTAGTGTCAGTGGAGCGGGCATGGGATTGTTCTATGGGTTGGAGTaGATGTTTTATGAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: CFCSQWNSTSVSGAGMGLFYGLE*MFYEQG
Trigger: CCCCTGCTCATAAAACATCCACTCCAACCCATAGAA...CAATCCCATGCCCGCTCCACTGACACTAGTCGAATTCCACTGAGAACAGAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CCA 90 bp ATCCCAAAGTGGTTAGGGGCCTTGTCTAATGCACTTCTGAAAGTCCATTATAAAAGCTGTCAGCTTCCTTaGAGAGGGGGACTGGCTCCG +
Preference number: 4 (lower is better)
Translates to: IPKWLGALSNALLKVHYKSCQLP*RGGLAP
Trigger: CGGAGCCAGTCCCCCTCTCCAAGGAAGCTGACAGCT...TTTATAATGGACTTTCAGAAGTGCATTAGACAAGGCCCCTAACCACTTTGGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CCA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCCACAAAGGTTGGGGTTaGAGGAATGCAAGCGAACTG +
Preference number: 4 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVHKGWG*RNASEL
Trigger: CAGTTCGCTTGCATTCCTCCAACCCCAACCTTTGTG...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CCA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCAGAGGCGGCTCTCATTaGCTACTTGCTGTGATAAGG +
Preference number: 4 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVRGGSH*LLAVIR
Trigger: CCTTATCACAGCAAGTAGCCAATGAGAGCCGCCTCT...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CCA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCAAACAGACTCTGACATaGAGAGGCGGCTCTCATTGG +
Preference number: 4 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVKQTLT*RGGSHW
Trigger: CCAATGAGAGCCGCCTCTCCATGTCAGAGTCTGTTT...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CCA 90 bp TGCTTCTGTTCTCAGTGGAATTCGACTAGTGTCAGTGGAGCGGGCATGGGATTGAACCATGCGCTCATATaGATCATCAGTTTCCGAAGC +
Preference number: 4 (lower is better)
Translates to: CFCSQWNSTSVSGAGMGLNHALI*IISFRS
Trigger: GCTTCGGAAACTGATGATCCATATGAGCGCATGGTT...CAATCCCATGCCCGCTCCACTGACACTAGTCGAATTCCACTGAGAACAGAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CCA 90 bp TGCTTCTGTTCTCAGTGGAATTCGACTAGTGTCAGTGGAGCGGGCATGGGATTGAAGGACTGGGTTGAATaGCTTACTTCCTGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: CFCSQWNSTSVSGAGMGLKDWVE*LTSCSE
Trigger: TTCAGAGCAGGAAGTAAGCCATTCAACCCAGTCCTT...CAATCCCATGCCCGCTCCACTGACACTAGTCGAATTCCACTGAGAACAGAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CCA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCCAAAAATCTTTGATCTaGCCGGAACCGGGCGTCTGT +
Preference number: 4 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVQKSLI*PEPGVC
Trigger: ACAGACGCCCGGTTCCGGCCAGATCAAAGATTTTTG...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CCA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCCGTCTCCGAGATCTCTaGAGTTCCTCTACTCTTTGC +
Preference number: 4 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVRLRDL*SSSTLC
Trigger: GCAAAGAGTAGAGGAACTCCAGAGATCTCGGAGACG...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CCA 90 bp TTCCCTGATGGGTCCTGGATCCTCTTCCAGCTACCTGATACCACATCTGATGGTAGTAAATCTGCACCCTaGGTGACAGCATATGGAATC +
Preference number: 4 (lower is better)
Translates to: FPDGSWILFQLPDTTSDGSKSAP*VTAYGI
Trigger: GATTCCATATGCTGTCACCCAGGGTGCAGATTTACT...ACCATCAGATGTGGTATCAGGTAGCTGGAAGAGGATCCAGGACCCATCAGGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CCA 90 bp TTCTGTTACAACATGTTACTACTTGATGGCGGATACTGGGGTAATGGAAGGGGATTTTCGTGGCCCACCTaGGATCCAACCATATGCCCC +
Preference number: 4 (lower is better)
Translates to: FCYNMLLLDGGYWGNGRGFSWPT*DPTICP
Trigger: GGGGCATATGGTTGGATCCCAGGTGGGCCACGAAAA...TCCCCTTCCATTACCCCAGTATCCGCCATCAAGTAGTAACATGTTGTAACAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR CCA 90 bp TCTGAGAAGCATCACATCTTTTTCGACAAGGCCAGCACAATCACACCACATCAACCAGGCTCAGGGCAGTaGTGCAATCATAGCTCACAG +
Preference number: 4 (lower is better)
Translates to: SEKHHIFFDKASTITPHQPGSGQ*CNHSSQ
Trigger: CTGTGAGCTATGATTGCACCACTGCCCTGAGCCTGG...TTGATGTGGTGTGATTGTGCTGGCCTTGTCGAAAAAGATGTGATGCTTCTCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR CCA 90 bp ATCCCAAAGTGGTTAGGGGCCTTGTCTAATGCACTTCTGAAAGTCCATTATAAACTGGCCCTTCGCGGGTaGCCCTTCCTGCAGTTGTAT +
Preference number: 4 (lower is better)
Translates to: IPKWLGALSNALLKVHYKLALRG*PFLQLY
Trigger: ATACAACTGCAGGAAGGGCCACCCGCGAAGGGCCAG...TTTATAATGGACTTTCAGAAGTGCATTAGACAAGGCCCCTAACCACTTTGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392505.6
CDS-3UTR TCA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCAAGAGCAGGCAATATTaGGGGTGTCCAAACCACCTT +
Preference number: 4 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVKSRQY*GCPNHL
Trigger: AAGGTGGTTTGGACACCCTCAATATTGCCTGCTCTT...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR TCA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCTTCTCCATCGTCTTGTaGCCCGCTTGTCTTTCTTTG +
Preference number: 4 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVFSIVL*PACLSL
Trigger: CAAAGAAAGACAAGCGGGTCACAAGACGATGGAGAA...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409631.5
CDS-3UTR TCA 90 bp AGCATCACATCTTTTTCGACAAGGCCAGCACAATCACACCACATCAAACAGACACTGTGGCCTTTACTGTaGTCCTGCTCGGAAACCATC +
Preference number: 4 (lower is better)
Translates to: SITSFSTRPAQSHHIKQTLWPLL*SCSETI
Trigger: GATGGTTTCCGAGCAGGATCACAGTAAAGGCCACAG...TGTCTGTTTGATGTGGTGTGATTGTGCTGGCCTTGTCGAAAAAGATGTGATGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR TCA 90 bp GAAGATTTTACTGCCGCAGGGCAAGCCACCTATGGATTTAAAATGGGAATGAGAGGTGGAGCAGTATCCTaGAACTGCAAATGCGGCAAC +
Preference number: 4 (lower is better)
Translates to: EDFTAAGQATYGFKMGMRGGAVS*NCKCGN
Trigger: GTTGCCGCATTTGCAGTTTCAGGATACTGCTCCACC...TCTCATTCCCATTTTAAATCCATAGGTGGCTTGCCCTGCGGCAGTAAAATCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR TCA 90 bp GTATTATTTTCAGGGAAGAAGCTGACCTGGATCAAGAATGTCCTGCTAGACCTTCCCCAAGGACTGGGTTaGATGGCTTACTTCCTGCTC +
Preference number: 4 (lower is better)
Translates to: VLFSGKKLTWIKNVLLDLPQGLG*MAYFLL
Trigger: GAGCAGGAAGTAAGCCATTCAACCCAGTCCTTGGGG...AAGGTCTAGCAGGACATTCTTGATCCAGGTCAGCTTCTTCCCTGAAAATAATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR TCA 90 bp TGCTTCTGTTCTCAGTGGAATTCGACTAGTGTCAGTGGAGCGGGCATGGGATTGCATACTTTGGAAGCATaGCATTCAGTGTTCCAACAG +
Preference number: 4 (lower is better)
Translates to: CFCSQWNSTSVSGAGMGLHTLEA*HSVFQQ
Trigger: CTGTTGGAACACTGAATGTCATGCTTCCAAAGTATG...CAATCCCATGCCCGCTCCACTGACACTAGTCGAATTCCACTGAGAACAGAAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR TCA 90 bp AGGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCAACCGCCTTCCCCTCCTaGTCTATCACCACCCCCTGG +
Preference number: 4 (lower is better)
Translates to: RFSVDPETTHSYKKHNCATAFPS*SITTPW
Trigger: CCAGGGGGTGGTGATAGATCAGGAGGGGAAGGCGGT...TGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR TCA 90 bp GGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATACCGCCTTCCCCTCCTaGTCTATCACCACCCCCTGG +
Preference number: 4 (lower is better)
Translates to: GFQLTQKPHIAIRNIIVHTAFPS*SITTPW
Trigger: CCAGGGGGTGGTGATAGATCAGGAGGGGAAGGCGGT...ATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR TCA 90 bp TCTGAGAAGCATCACATCTTTTTCGACAAGGCCAGCACAATCACACCACATCAAGTGTCAGGCTACCTCTaGCCAACATTCACTCACCTG +
Preference number: 4 (lower is better)
Translates to: SEKHHIFFDKASTITPHQVSGYL*PTFTHL
Trigger: CAGGTGAGTGAATGTTGGTCAGAGGTAGCCTGACAC...TTGATGTGGTGTGATTGTGCTGGCCTTGTCGAAAAAGATGTGATGCTTCTCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR TCA 90 bp TGCTTCTGTTCTCAGTGGAATTCGACTAGTGTCAGTGGAGCGGGCATGGGATTGTTCTCATTCTCATCTTaGAGTCCTCATCAGAGTGTC +
Preference number: 4 (lower is better)
Translates to: CFCSQWNSTSVSGAGMGLFSFSS*SPHQSV
Trigger: GACACTCTGATGAGGACTTCAAGATGAGAATGAGAA...CAATCCCATGCCCGCTCCACTGACACTAGTCGAATTCCACTGAGAACAGAAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR GCA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCGTGTCCAAACCACCTTaGACCTTGGAGTCAAAGTCT +
Preference number: 4 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVVSKPP*TLESKS
Trigger: AGACTTTGACTCCAAGGTGCAAGGTGGTTTGGACAC...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR GCA 90 bp GAAGATTTTACTGCCGCAGGGCAAGCCACCTATGGATTTAAAATGGGAATGAGATCCGGTTCTAGCAATTaGCGACTTACAGAGGGCTCG +
Preference number: 4 (lower is better)
Translates to: EDFTAAGQATYGFKMGMRSGSSN*RLTEGS
Trigger: CGAGCCCTCTGTAAGTCGGCAATTGCTAGAACCGGA...TCTCATTCCCATTTTAAATCCATAGGTGGCTTGCCCTGCGGCAGTAAAATCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR GCA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCTGCTCGGAAACCATCTaGTTCAGCTTCTCCTTCTCT +
Preference number: 4 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVCSETI*FSFSFS
Trigger: AGAGAAGGAGAAGCTGAAGCAGATGGTTTCCGAGCA...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR GCA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCCTCTCATTGGCTACTTaGTGTGATAAGGGGAGACTG +
Preference number: 4 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVLSLAT*CDKGRL
Trigger: CAGTCTCCCCTTATCACAGCAAGTAGCCAATGAGAG...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR GCA 90 bp ATCCCAAAGTGGTTAGGGGCCTTGTCTAATGCACTTCTGAAAGTCCATTATAAAAGGAGCTGGCAGGCATaGTCGACGCCCATTTCGGAA +
Preference number: 4 (lower is better)
Translates to: IPKWLGALSNALLKVHYKRSWQA*STPISE
Trigger: TTCCGAAATGGGCGTCGAGCATGCCTGCCAGCTCCT...TTTATAATGGACTTTCAGAAGTGCATTAGACAAGGCCCCTAACCACTTTGGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR GCA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCCTGCTCCTTTTATTCTaGTTTCCAAGGACGGTGTGG +
Preference number: 4 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVLLLLF*FPRTVW
Trigger: CCACACCGTCCTTGGAAAGCAGAATAAAAGGAGCAG...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR GCA 90 bp AGCATCACATCTTTTTCGACAAGGCCAGCACAATCACACCACATCAAACAGACAGTCAGCCTCTACCAGTaGTGGTGTGTGCCATTGATC +
Preference number: 4 (lower is better)
Translates to: SITSFSTRPAQSHHIKQTVSLYQ*WCVPLI
Trigger: GATCAATGGCACACACCAGCACTGGTAGAGGCTGAC...TGTCTGTTTGATGTGGTGTGATTGTGCTGGCCTTGTCGAAAAAGATGTGATGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR GCA 90 bp ATATACTGGGCCAAGTGCAAACATTTATTACATCCCCTGGTGTGTGCAGAGCTCAGGGGAGGGTGCATATaGACGTGGCCTTCTAGAAAA +
Preference number: 4 (lower is better)
Translates to: IYWAKCKHLLHPLVCAELRGGCI*TWPSRK
Trigger: TTTTCTAGAAGGCCACGTGCATATGCACCCTCCCCT...GAGCTCTGCACACACCAGGGGATGTAATAAATGTTTGCACTTGGCCCAGTATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR GCA 90 bp GAAGATTTTACTGCCGCAGGGCAAGCCACCTATGGATTTAAAATGGGAATGAGAAATGGAAGGGGAGGGTaGATATGCACGTGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: EDFTAAGQATYGFKMGMRNGRGG*ICTWPS
Trigger: AGAAGGCCACGTGCATATGCACCCTCCCCTTCCATT...TCTCATTCCCATTTTAAATCCATAGGTGGCTTGCCCTGCGGCAGTAAAATCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR GCA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCGCGGGTGGCCCTTCCTaGAGTTGTATTTTTGTATCT +
Preference number: 4 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVAGGPS*SCIFVS
Trigger: AGATACAAAAATACAACTGCAGGAAGGGCCACCCGC...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000392505.6
CDS-3UTR CCA 90 bp ATATACTGGGCCAAGTGCAAACATTTATTACATCCCCTGGTGTGTGCAGAGCTCTGCCTACTGTCCCTTTaGGAGGATGTTGAAGAGGAG +
Preference number: 4 (lower is better)
Translates to: IYWAKCKHLLHPLVCAELCLLSL*EDVEEE
Trigger: CTCCTCTTCAACATCCTCCCAAAGGGACAGTAGGCA...GAGCTCTGCACACACCAGGGGATGTAATAAATGTTTGCACTTGGCCCAGTATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CCA 90 bp TGCTTCTGTTCTCAGTGGAATTCGACTAGTGTCAGTGGAGCGGGCATGGGATTGTTCTGGACATTGGTTTaGCCTATTTTCAGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: CFCSQWNSTSVSGAGMGLFWTLV*PIFSPS
Trigger: AGAAGGGCTGAAAATAGGCCAAACCAATGTCCAGAA...CAATCCCATGCCCGCTCCACTGACACTAGTCGAATTCCACTGAGAACAGAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CCA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCGATGATGTCGCAGTTTaGAGACCCATGCATCAAACC +
Preference number: 4 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVDDVAV*RPMHQT
Trigger: GGTTTGATGCATGGGTCTCCAAACTGCGACATCATC...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CCA 90 bp TTCCCTGATGGGTCCTGGATCCTCTTCCAGCTACCTGATACCACATCTGATGGTTCCACAAGGTTTGACTaGCAATGTGCAAGATCTTCT +
Preference number: 4 (lower is better)
Translates to: FPDGSWILFQLPDTTSDGSTRFD*QCARSS
Trigger: AGAAGATCTTGCACATTGCCAGTCAAACCTTGTGGA...ACCATCAGATGTGGTATCAGGTAGCTGGAAGAGGATCCAGGACCCATCAGGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CCA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCTGTTGGCATGGAACCTaGTCTCCAAATGCACTTTGC +
Preference number: 4 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVCWHGT*SPNALC
Trigger: GCAAAGTGCATTTGGAGACCAGGTTCCATGCCAACA...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CCA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCCAGCTCATAGTTTGTTaGCATGGAACCTGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVQLIVC*HGTWSP
Trigger: TGGAGACCAGGTTCCATGCCAACAAACTATGAGCTG...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CCA 90 bp ATATACTGGGCCAAGTGCAAACATTTATTACATCCCCTGGTGTGTGCAGAGCTCCGTCTCCGAGATCTCTaGAGTTCCTCTACTCTTTGC +
Preference number: 4 (lower is better)
Translates to: IYWAKCKHLLHPLVCAELRLRDL*SSSTLC
Trigger: GCAAAGAGTAGAGGAACTCCAGAGATCTCGGAGACG...GAGCTCTGCACACACCAGGGGATGTAATAAATGTTTGCACTTGGCCCAGTATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CCA 90 bp TTCTGTTACAACATGTTACTACTTGATGGCGGATACTGGGGTAATGGAAGGGGATCCTGCGATAGGGGATaGTGCTTCCAGACAGTGGAA +
Preference number: 4 (lower is better)
Translates to: FCYNMLLLDGGYWGNGRGSCDRG*CFQTVE
Trigger: TTCCACTGTCTGGAAGCACCATCCCCTATCGCAGGA...TCCCCTTCCATTACCCCAGTATCCGCCATCAAGTAGTAACATGTTGTAACAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR CCA 90 bp TGCTTCTGTTCTCAGTGGAATTCGACTAGTGTCAGTGGAGCGGGCATGGGATTGCACTGTGAGGTTAGGTaGAAGAGGGATGGTTTATTA +
Preference number: 4 (lower is better)
Translates to: CFCSQWNSTSVSGAGMGLHCEVR*KRDGLL
Trigger: TAATAAACCATCCCTCTTCCACCTAACCTCACAGTG...CAATCCCATGCCCGCTCCACTGACACTAGTCGAATTCCACTGAGAACAGAAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CCA 90 bp ATTATCTGGACGCAGGACAGGAAATTAACGAGCCACGTAAATACAGAGATCTACAGCCTCTACCAGTGCTaGTGTGTGCCATTGATCCGC +
Preference number: 4 (lower is better)
Translates to: IIWTQDRKLTSHVNTEIYSLYQC*CVPLIR
Trigger: GCGGATCAATGGCACACACCAGCACTGGTAGAGGCT...GTAGATCTCTGTATTTACGTGGCTCGTTAATTTCCTGTCCTGCGTCCAGATAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CCA 90 bp AATATTCCTCTCTCTACAATTGCCCTCACTTCTATTTGGGAGGAAGGAATGGCTCATTGCGCTCCAGCCTaGGTGACAGAGCACTCAAGA +
Preference number: 4 (lower is better)
Translates to: NIPLSTIALTSIWEEGMAHCAPA*VTEHSR
Trigger: TCTTGAGTGCTCTGTCACCCAGGCTGGAGCGCAATG...AGCCATTCCTTCCTCCCAAATAGAAGTGAGGGCAATTGTAGAGAGAGGAATATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR TCA 90 bp TGGACGCAGGACAGGAAATTAACGAGCCACGTAAATACAGAGATCTACTTAGCAGGAGTGGATGTTTTATaGGCAGGGGAAATGCCCTTC +
Preference number: 4 (lower is better)
Translates to: WTQDRKLTSHVNTEIYLAGVDVL*AGEMPF
Trigger: GAAGGGCATTTCCCCTGCTCATAAAACATCCACTCC...TGCTAAGTAGATCTCTGTATTTACGTGGCTCGTTAATTTCCTGTCCTGCGTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR TCA 90 bp TTCTGTTACAACATGTTACTACTTGATGGCGGATACTGGGGTAATGGAAGGGGAGTCCTCTCCAGTATGTaGATACTCTGCCTACTGTCC +
Preference number: 4 (lower is better)
Translates to: FCYNMLLLDGGYWGNGRGVLSSM*ILCLLS
Trigger: GGACAGTAGGCAGAGTATTCACATACTGGAGAGGAC...TCCCCTTCCATTACCCCAGTATCCGCCATCAAGTAGTAACATGTTGTAACAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR TCA 90 bp GAAGATTTTACTGCCGCAGGGCAAGCCACCTATGGATTTAAAATGGGAATGAGAGTCCTCTCCAGTATGTaGATACTCTGCCTACTGTCC +
Preference number: 4 (lower is better)
Translates to: EDFTAAGQATYGFKMGMRVLSSM*ILCLLS
Trigger: GGACAGTAGGCAGAGTATTCACATACTGGAGAGGAC...TCTCATTCCCATTTTAAATCCATAGGTGGCTTGCCCTGCGGCAGTAAAATCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR TCA 90 bp GAAGATTTTACTGCCGCAGGGCAAGCCACCTATGGATTTAAAATGGGAATGAGAAACATTAGCAGCTGGTaGGGATTCAGCTGTGGACGT +
Preference number: 4 (lower is better)
Translates to: EDFTAAGQATYGFKMGMRNISSW*GFSCGR
Trigger: ACGTCCACAGCTGAATCCTCACCAGCTGCTAATGTT...TCTCATTCCCATTTTAAATCCATAGGTGGCTTGCCCTGCGGCAGTAAAATCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR TCA 90 bp TTCTGTTACAACATGTTACTACTTGATGGCGGATACTGGGGTAATGGAAGGGGAATGCAAGCGAACTGGTaGCATGGTAGCACTGAAAGG +
Preference number: 4 (lower is better)
Translates to: FCYNMLLLDGGYWGNGRGMQANW*HGSTER
Trigger: CCTTTCAGTGCTACCATGTCACCAGTTCGCTTGCAT...TCCCCTTCCATTACCCCAGTATCCGCCATCAAGTAGTAACATGTTGTAACAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR TCA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCTGGCTAGGGGGAGTCTaGAATTCAATATCTGCACAA +
Preference number: 4 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVWLGGV*NSISAQ
Trigger: TTGTGCAGATATTGAATTTCAGACTCCCCCTAGCCA...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR TCA 90 bp TGCTTCTGTTCTCAGTGGAATTCGACTAGTGTCAGTGGAGCGGGCATGGGATTGCTTTGTATAATCTGTTaGACTTTCCAGAGGGTCAGT +
Preference number: 4 (lower is better)
Translates to: CFCSQWNSTSVSGAGMGLLCIIC*TFQRVS
Trigger: ACTGACCCTCTGGAAAGTTCAACAGATTATACAAAG...CAATCCCATGCCCGCTCCACTGACACTAGTCGAATTCCACTGAGAACAGAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR TCA 90 bp TTCCCTGATGGGTCCTGGATCCTCTTCCAGCTACCTGATACCACATCTGATGGTCTTTGTATAATCTGTTaGACTTTCCAGAGGGTCAGT +
Preference number: 4 (lower is better)
Translates to: FPDGSWILFQLPDTTSDGLCIIC*TFQRVS
Trigger: ACTGACCCTCTGGAAAGTTCAACAGATTATACAAAG...ACCATCAGATGTGGTATCAGGTAGCTGGAAGAGGATCCAGGACCCATCAGGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR TCA 90 bp AGGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCAGAGTGCCTGAGACAGTaGCTGTCGGAGCCGTGCCAT +
Preference number: 4 (lower is better)
Translates to: RFSVDPETTHSYKKHNCAECLRQ*LSEPCH
Trigger: ATGGCACGGCTCCGACAGTCACTGTCTCAGGCACTC...TGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000190611.9
ENST00000392505.6
ENST00000409045.7
CDS-3UTR TCA 90 bp ATCCCAAAGTGGTTAGGGGCCTTGTCTAATGCACTTCTGAAAGTCCATTATAAATTCTGGTTGAGTGCCTaGGACAGTGACTGTCGGAGC +
Preference number: 4 (lower is better)
Translates to: IPKWLGALSNALLKVHYKFWLSA*DSDCRS
Trigger: GCTCCGACAGTCACTGTCTCAGGCACTCAACCAGAA...TTTATAATGGACTTTCAGAAGTGCATTAGACAAGGCCCCTAACCACTTTGGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000190611.9
ENST00000392505.6
ENST00000409045.7
CDS-3UTR TCA 90 bp ATCCCAAAGTGGTTAGGGGCCTTGTCTAATGCACTTCTGAAAGTCCATTATAAACTCAGAAACAGACTCTaGCATGGAGAGGCGGCTCTC +
Preference number: 4 (lower is better)
Translates to: IPKWLGALSNALLKVHYKLRNRL*HGEAAL
Trigger: GAGAGCCGCCTCTCCATGTCAGAGTCTGTTTCTGAG...TTTATAATGGACTTTCAGAAGTGCATTAGACAAGGCCCCTAACCACTTTGGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR TCA 90 bp GGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATGGTGCTGCAGGGTGTTaGGCGGCTCGTTTAGCTCCA +
Preference number: 4 (lower is better)
Translates to: GFQLTQKPHIAIRNIIVHGAAGC*AARLAP
Trigger: TGGAGCTAAACGAGCCGCTCAACACCCTGCAGCACC...ATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR TCA 90 bp ATCCCAAAGTGGTTAGGGGCCTTGTCTAATGCACTTCTGAAAGTCCATTATAAACCCCAAGGACTGGGTTaGATGGCTTACTTCCTGCTC +
Preference number: 4 (lower is better)
Translates to: IPKWLGALSNALLKVHYKPQGLG*MAYFLL
Trigger: GAGCAGGAAGTAAGCCATTCAACCCAGTCCTTGGGG...TTTATAATGGACTTTCAGAAGTGCATTAGACAAGGCCCCTAACCACTTTGGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR TCA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCATGGCTAACCTGTTCTaGGAAAAAGCGGAATCCCTT +
Preference number: 4 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVMANLF*EKAESL
Trigger: AAGGGATTCCGCTTTTTCTCAGAACAGGTTAGCCAT...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR TCA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCTTCTTTGATTCACAGTaGCAGGCAGAAATGGGTGGA +
Preference number: 4 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVFFDSQ*QAEMGG
Trigger: TCCACCCATTTCTGCCTGTCACTGTGAATCAAAGAA...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR TCA 90 bp TTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGTACCGCCTTCCCCTCCTaGTCTATCACCACCCCCTGG +
Preference number: 4 (lower is better)
Translates to: FQLTQKPHIAIRNIIVHSTAFPS*SITTPW
Trigger: CCAGGGGGTGGTGATAGATCAGGAGGGGAAGGCGGT...ACTATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR TCA 90 bp GTATTATTTTCAGGGAAGAAGCTGACCTGGATCAAGAATGTCCTGCTAGACCTTGAGCGGGCATGGGATTaGGACATGGATTACATGGTG +
Preference number: 4 (lower is better)
Translates to: VLFSGKKLTWIKNVLLDLERAWD*DMDYMV
Trigger: CACCATGTAATCCATGTCTCAATCCCATGCCCGCTC...AAGGTCTAGCAGGACATTCTTGATCCAGGTCAGCTTCTTCCCTGAAAATAATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR TCA 90 bp ATCCCAAAGTGGTTAGGGGCCTTGTCTAATGCACTTCTGAAAGTCCATTATAAACAGTCGTTGCTTCCCTaGTGGGTCCTGGATCCTCTT +
Preference number: 4 (lower is better)
Translates to: IPKWLGALSNALLKVHYKQSLLP*WVLDPL
Trigger: AAGAGGATCCAGGACCCATCAGGGAAGCAACGACTG...TTTATAATGGACTTTCAGAAGTGCATTAGACAAGGCCCCTAACCACTTTGGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR TCA 90 bp ATATACTGGGCCAAGTGCAAACATTTATTACATCCCCTGGTGTGTGCAGAGCTCAGCATATGGAATCGATaGGCTTCTGGTCAGCCTCTA +
Preference number: 4 (lower is better)
Translates to: IYWAKCKHLLHPLVCAELSIWNR*ASGQPL
Trigger: TAGAGGCTGACCAGAAGCTCATCGATTCCATATGCT...GAGCTCTGCACACACCAGGGGATGTAATAAATGTTTGCACTTGGCCCAGTATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR TCA 90 bp TGGACGCAGGACAGGAAATTAACGAGCCACGTAAATACAGAGATCTACTTAGCAGTGAGGTGGGGGTACTaGTTCTTGGCTTTGAAGAGT +
Preference number: 4 (lower is better)
Translates to: WTQDRKLTSHVNTEIYLAVRWGY*FLALKS
Trigger: ACTCTTCAAAGCCAAGAATCAGTACCCCCACCTCAC...TGCTAAGTAGATCTCTGTATTTACGTGGCTCGTTAATTTCCTGTCCTGCGTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR GCA 90 bp GAAGATTTTACTGCCGCAGGGCAAGCCACCTATGGATTTAAAATGGGAATGAGACAGTTTGGAGACCCATaGATCAAACCAGTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: EDFTAAGQATYGFKMGMRQFGDP*IKPVLG
Trigger: TCCCAGGACTGGTTTGATGCATGGGTCTCCAAACTG...TCTCATTCCCATTTTAAATCCATAGGTGGCTTGCCCTGCGGCAGTAAAATCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR GCA 90 bp ATCCCAAAGTGGTTAGGGGCCTTGTCTAATGCACTTCTGAAAGTCCATTATAAACAGGGAGGCTATTGCTaGATGGTAAAGGGGACTGCC +
Preference number: 4 (lower is better)
Translates to: IPKWLGALSNALLKVHYKQGGYC*MVKGTA
Trigger: GGCAGTCCCCTTTACCATGCAGCAATAGCCTCCCTG...TTTATAATGGACTTTCAGAAGTGCATTAGACAAGGCCCCTAACCACTTTGGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR GCA 90 bp TCTGAGAAGCATCACATCTTTTTCGACAAGGCCAGCACAATCACACCACATCAATTGCAGGGAGGCTATTaGTGCATGGTAAAGGGGACT +
Preference number: 4 (lower is better)
Translates to: SEKHHIFFDKASTITPHQLQGGY*CMVKGT
Trigger: AGTCCCCTTTACCATGCAGCAATAGCCTCCCTGCAA...TTGATGTGGTGTGATTGTGCTGGCCTTGTCGAAAAAGATGTGATGCTTCTCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR GCA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCATGTGCAAGATCTTCTaGACACCTGTCCATCTCTTC +
Preference number: 4 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVMCKIF*TPVHLF
Trigger: GAAGAGATGGACAGGTGTGCAGAAGATCTTGCACAT...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR GCA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCGTCAGTAAAGTTAGGTaGCGACTGAGTTCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVVSKVR*RLSSLK
Trigger: CTTCAGAGAACTCAGTCGGCACCTAACTTTACTGAC...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR GCA 90 bp ATATACTGGGCCAAGTGCAAACATTTATTACATCCCCTGGTGTGTGCAGAGCTCTGCTCGGAAACCATCTaGTTCAGCTTCTCCTTCTCT +
Preference number: 4 (lower is better)
Translates to: IYWAKCKHLLHPLVCAELCSETI*FSFSFS
Trigger: AGAGAAGGAGAAGCTGAAGCAGATGGTTTCCGAGCA...GAGCTCTGCACACACCAGGGGATGTAATAAATGTTTGCACTTGGCCCAGTATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR GCA 90 bp ATCAAAATATCATTTCAAGAGCAGTCATTCTGGATACCGACGGCTTTGTCAGTGGCCGTGCCATCTGCGTaGTGTGGCCTTTACTGTGAT +
Preference number: 4 (lower is better)
Translates to: IKISFQEQSFWIPTALSVAVPSA*CGLYCD
Trigger: ATCACAGTAAAGGCCACAGCACGCAGATGGCACGGC...CACTGACAAAGCCGTCGGTATCCAGAATGACTGCTCTTGAAATGATATTTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR GCA 90 bp ATCCCAAAGTGGTTAGGGGCCTTGTCTAATGCACTTCTGAAAGTCCATTATAAAGCCGTGCCATCTGCGTaGTGTGGCCTTTACTGTGAT +
Preference number: 4 (lower is better)
Translates to: IPKWLGALSNALLKVHYKAVPSA*CGLYCD
Trigger: ATCACAGTAAAGGCCACAGCACGCAGATGGCACGGC...TTTATAATGGACTTTCAGAAGTGCATTAGACAAGGCCCCTAACCACTTTGGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR GCA 90 bp ATCCCAAAGTGGTTAGGGGCCTTGTCTAATGCACTTCTGAAAGTCCATTATAAAATTTCCTCACAGAGGTaGTGCAGGGTGTTGAGCGGC +
Preference number: 4 (lower is better)
Translates to: IPKWLGALSNALLKVHYKISSQR*CRVLSG
Trigger: GCCGCTCAACACCCTGCAGCACCTCTGTGAGGAAAT...TTTATAATGGACTTTCAGAAGTGCATTAGACAAGGCCCCTAACCACTTTGGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR GCA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCGAATGGCTTACTTCCTaGTCTGAAATAGGTGGAGCA +
Preference number: 4 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVEWLTS*SEIGGA
Trigger: TGCTCCACCTATTTCAGAGCAGGAAGTAAGCCATTC...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR GCA 90 bp GAAGATTTTACTGCCGCAGGGCAAGCCACCTATGGATTTAAAATGGGAATGAGATGCGATAGGGGATGGTaGTTCCAGACAGTGGAACAA +
Preference number: 4 (lower is better)
Translates to: EDFTAAGQATYGFKMGMRCDRGW*FQTVEQ
Trigger: TTGTTCCACTGTCTGGAAGCACCATCCCCTATCGCA...TCTCATTCCCATTTTAAATCCATAGGTGGCTTGCCCTGCGGCAGTAAAATCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR GCA 90 bp AGCATCACATCTTTTTCGACAAGGCCAGCACAATCACACCACATCAAACAGACACATCTGATGGTCAGCTaGTGCTCCCTTTCCTTCATC +
Preference number: 4 (lower is better)
Translates to: SITSFSTRPAQSHHIKQTHLMVS*CSLSFI
Trigger: GATGAAGGAAAGGGAGCAGCAGCTGACCATCAGATG...TGTCTGTTTGATGTGGTGTGATTGTGCTGGCCTTGTCGAAAAAGATGTGATGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR GCA 90 bp ATCAAAATATCATTTCAAGAGCAGTCATTCTGGATACCGACGGCTTTGTCAGTGACATCCCCTGGTGTGTaGAGAGCTCTGCTCCCACAA +
Preference number: 4 (lower is better)
Translates to: IKISFQEQSFWIPTALSVTSPGV*RALLPQ
Trigger: TTGTGGGAGCAGAGCTCTGCACACACCAGGGGATGT...CACTGACAAAGCCGTCGGTATCCAGAATGACTGCTCTTGAAATGATATTTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR CCA 90 bp GAAGATTTTACTGCCGCAGGGCAAGCCACCTATGGATTTAAAATGGGAATGAGACTTGCTGGGGCTATCTaGGTAAATTATAGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: EDFTAAGQATYGFKMGMRLAGAI*VNYRGG
Trigger: GCCACCCCTATAATTTACCCAGATAGCCCCAGCAAG...TCTCATTCCCATTTTAAATCCATAGGTGGCTTGCCCTGCGGCAGTAAAATCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CCA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCAACCACCTTGCACCTTaGAGTCAAAGTCTTCCAAGT +
Preference number: 4 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVNHLAP*SQSLPS
Trigger: ACTTGGAAGACTTTGACTCCAAGGTGCAAGGTGGTT...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CCA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCGGCACTTCTATGGGTTaGAGTGGATGTTTTATGAGC +
Preference number: 4 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVGTSMG*SGCFMS
Trigger: GCTCATAAAACATCCACTCCAACCCATAGAAGTGCC...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CCA 90 bp GGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGCTGTCAGCTTCCTTaGAGAGGGGGACTGGCTCCG +
Preference number: 4 (lower is better)
Translates to: GFQLTQKPHIAIRNIIVHSCQLP*RGGLAP
Trigger: CGGAGCCAGTCCCCCTCTCCAAGGAAGCTGACAGCT...ATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CCA 90 bp ATATACTGGGCCAAGTGCAAACATTTATTACATCCCCTGGTGTGTGCAGAGCTCGATGATGTCGCAGTTTaGAGACCCATGCATCAAACC +
Preference number: 4 (lower is better)
Translates to: IYWAKCKHLLHPLVCAELDDVAV*RPMHQT
Trigger: GGTTTGATGCATGGGTCTCCAAACTGCGACATCATC...GAGCTCTGCACACACCAGGGGATGTAATAAATGTTTGCACTTGGCCCAGTATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CCA 90 bp TCTGAGAAGCATCACATCTTTTTCGACAAGGCCAGCACAATCACACCACATCAACACAAAGGTTGGGGTTaGAGGAATGCAAGCGAACTG +
Preference number: 4 (lower is better)
Translates to: SEKHHIFFDKASTITPHQHKGWG*RNASEL
Trigger: CAGTTCGCTTGCATTCCTCCAACCCCAACCTTTGTG...TTGATGTGGTGTGATTGTGCTGGCCTTGTCGAAAAAGATGTGATGCTTCTCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CCA 90 bp AGCATCACATCTTTTTCGACAAGGCCAGCACAATCACACCACATCAAACAGACAAGAGGCGGCTCTCATTaGCTACTTGCTGTGATAAGG +
Preference number: 4 (lower is better)
Translates to: SITSFSTRPAQSHHIKQTRGGSH*LLAVIR
Trigger: CCTTATCACAGCAAGTAGCCAATGAGAGCCGCCTCT...TGTCTGTTTGATGTGGTGTGATTGTGCTGGCCTTGTCGAAAAAGATGTGATGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CCA 90 bp TTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGTGTCAGGACAAGGAGCTaGCAGGCATGCTCGACGCCC +
Preference number: 4 (lower is better)
Translates to: FQLTQKPHIAIRNIIVHSVRTRS*QACSTP
Trigger: GGGCGTCGAGCATGCCTGCCAGCTCCTTGTCCTGAC...ACTATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CCA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCAACCATGCGCTCATATaGATCATCAGTTTCCGAAGC +
Preference number: 4 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVNHALI*IISFRS
Trigger: GCTTCGGAAACTGATGATCCATATGAGCGCATGGTT...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CCA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCAAGGACTGGGTTGAATaGCTTACTTCCTGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVKDWVE*LTSCSE
Trigger: TTCAGAGCAGGAAGTAAGCCATTCAACCCAGTCCTT...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CCA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCCATAGTTTGTTGGCATaGAACCTGGTCTCCAAATGC +
Preference number: 4 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVHSLLA*NLVSKC
Trigger: GCATTTGGAGACCAGGTTCCATGCCAACAAACTATG...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CCA 90 bp ATATACTGGGCCAAGTGCAAACATTTATTACATCCCCTGGTGTGTGCAGAGCTCCAGCTCATAGTTTGTTaGCATGGAACCTGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: IYWAKCKHLLHPLVCAELQLIVC*HGTWSP
Trigger: TGGAGACCAGGTTCCATGCCAACAAACTATGAGCTG...GAGCTCTGCACACACCAGGGGATGTAATAAATGTTTGCACTTGGCCCAGTATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CCA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCGAAAGGATCCCAAAGTaGTTAGGGGCCTTGTCTAAT +
Preference number: 4 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVERIPK*LGALSN
Trigger: ATTAGACAAGGCCCCTAACCACTTTGGGATCCTTTC...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CCA 90 bp ATATACTGGGCCAAGTGCAAACATTTATTACATCCCCTGGTGTGTGCAGAGCTCGCCCTCACTTCTATTTaGGAGGAAGGAATGGCTAGA +
Preference number: 4 (lower is better)
Translates to: IYWAKCKHLLHPLVCAELALTSI*EEGMAR
Trigger: TCTAGCCATTCCTTCCTCCCAAATAGAAGTGAGGGC...GAGCTCTGCACACACCAGGGGATGTAATAAATGTTTGCACTTGGCCCAGTATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR CCA 90 bp TGCTTCTGTTCTCAGTGGAATTCGACTAGTGTCAGTGGAGCGGGCATGGGATTGATAAAAGCAGATCAATaGTTGCCTCAGGATAGAGGA +
Preference number: 4 (lower is better)
Translates to: CFCSQWNSTSVSGAGMGLIKADQ*LPQDRG
Trigger: TCCTCTATCCTGAGGCAACCATTGATCTGCTTTTAT...CAATCCCATGCCCGCTCCACTGACACTAGTCGAATTCCACTGAGAACAGAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR CCA 90 bp ATATACTGGGCCAAGTGCAAACATTTATTACATCCCCTGGTGTGTGCAGAGCTCCACACCCTAGATCTGTaGACTCAGAATCTTTGGAGG +
Preference number: 4 (lower is better)
Translates to: IYWAKCKHLLHPLVCAELHTLDL*TQNLWR
Trigger: CCTCCAAAGATTCTGAGTCCACAGATCTAGGGTGTG...GAGCTCTGCACACACCAGGGGATGTAATAAATGTTTGCACTTGGCCCAGTATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR CCA 90 bp ATATACTGGGCCAAGTGCAAACATTTATTACATCCCCTGGTGTGTGCAGAGCTCTCCATATTACAGGGCTaGCGTTGGGACAGAAGTCAA +
Preference number: 4 (lower is better)
Translates to: IYWAKCKHLLHPLVCAELSILQG*RWDRSQ
Trigger: TTGACTTCTGTCCCAACGCCAGCCCTGTAATATGGA...GAGCTCTGCACACACCAGGGGATGTAATAAATGTTTGCACTTGGCCCAGTATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000190611.9
3UTR CAA 72 bp TGGAATTCGACTAGTGTCAGTGGAGCGGGCATGGGATaGAGACATGGATTACATGGTGCTTCACTCAAAAAC +
Preference number: 4 (lower is better)
Translates to: WNSTSVSGAGMG*RHGLHGASLKN
Trigger: GTTTTTGAGTGAAGCACCATGTAATCCATGTCTCAATCCCATGCCCGCTCCACTGACACTAGTCGAATTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR TCA 90 bp TTCTGTTACAACATGTTACTACTTGATGGCGGATACTGGGGTAATGGAAGGGGAGACATGATATGTCTTTaGCCTTGCTGGGGCTATCTG +
Preference number: 4 (lower is better)
Translates to: FCYNMLLLDGGYWGNGRGDMICL*PCWGYL
Trigger: CAGATAGCCCCAGCAAGGTCAAAGACATATCATGTC...TCCCCTTCCATTACCCCAGTATCCGCCATCAAGTAGTAACATGTTGTAACAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR TCA 90 bp TCTGAGAAGCATCACATCTTTTTCGACAAGGCCAGCACAATCACACCACATCAAAAGAGCAGGCAATATTaGGGGTGTCCAAACCACCTT +
Preference number: 4 (lower is better)
Translates to: SEKHHIFFDKASTITPHQKSRQY*GCPNHL
Trigger: AAGGTGGTTTGGACACCCTCAATATTGCCTGCTCTT...TTGATGTGGTGTGATTGTGCTGGCCTTGTCGAAAAAGATGTGATGCTTCTCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR TCA 90 bp TGCTTCTGTTCTCAGTGGAATTCGACTAGTGTCAGTGGAGCGGGCATGGGATTGGTTGAAGGAAATATGTaGAAACTAGCATCTCTTGGT +
Preference number: 4 (lower is better)
Translates to: CFCSQWNSTSVSGAGMGLVEGNM*KLASLG
Trigger: ACCAAGAGATGCTAGTTTTCACATATTTCCTTCAAC...CAATCCCATGCCCGCTCCACTGACACTAGTCGAATTCCACTGAGAACAGAAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR TCA 90 bp GTATTATTTTCAGGGAAGAAGCTGACCTGGATCAAGAATGTCCTGCTAGACCTTAACATTAGCAGCTGGTaGGGATTCAGCTGTGGACGT +
Preference number: 4 (lower is better)
Translates to: VLFSGKKLTWIKNVLLDLNISSW*GFSCGR
Trigger: ACGTCCACAGCTGAATCCTCACCAGCTGCTAATGTT...AAGGTCTAGCAGGACATTCTTGATCCAGGTCAGCTTCTTCCCTGAAAATAATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR TCA 90 bp TTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGTGGTGCTGCAGGGTGTTaGGCGGCTCGTTTAGCTCCA +
Preference number: 4 (lower is better)
Translates to: FQLTQKPHIAIRNIIVHSGAAGC*AARLAP
Trigger: TGGAGCTAAACGAGCCGCTCAACACCCTGCAGCACC...ACTATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR TCA 90 bp ATCCCAAAGTGGTTAGGGGCCTTGTCTAATGCACTTCTGAAAGTCCATTATAAAGGTGGAGCAGTATCCTaGAACTGCAAATGCGGCAAC +
Preference number: 4 (lower is better)
Translates to: IPKWLGALSNALLKVHYKGGAVS*NCKCGN
Trigger: GTTGCCGCATTTGCAGTTTCAGGATACTGCTCCACC...TTTATAATGGACTTTCAGAAGTGCATTAGACAAGGCCCCTAACCACTTTGGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR TCA 90 bp ATTATCTGGACGCAGGACAGGAAATTAACGAGCCACGTAAATACAGAGATCTACGCAGAAATGGGTGGATaGTGGCTAACCTGTTCTGAG +
Preference number: 4 (lower is better)
Translates to: IIWTQDRKLTSHVNTEIYAEMGG*WLTCSE
Trigger: CTCAGAACAGGTTAGCCATCATCCACCCATTTCTGC...GTAGATCTCTGTATTTACGTGGCTCGTTAATTTCCTGTCCTGCGTCCAGATAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR TCA 90 bp ATCCCAAAGTGGTTAGGGGCCTTGTCTAATGCACTTCTGAAAGTCCATTATAAATCTTCCAAAAATCTTTaGTCTGGCCGGAACCGGGCG +
Preference number: 4 (lower is better)
Translates to: IPKWLGALSNALLKVHYKSSKNL*SGRNRA
Trigger: CGCCCGGTTCCGGCCAGATCAAAGATTTTTGGAAGA...TTTATAATGGACTTTCAGAAGTGCATTAGACAAGGCCCCTAACCACTTTGGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR TCA 90 bp GTATTATTTTCAGGGAAGAAGCTGACCTGGATCAAGAATGTCCTGCTAGACCTTAGAGAGAATGGAAGGTaGGGTGGGGGTACTGATTCT +
Preference number: 4 (lower is better)
Translates to: VLFSGKKLTWIKNVLLDLRENGR*GGGTDS
Trigger: AGAATCAGTACCCCCACCTCACCTTCCATTCTCTCT...AAGGTCTAGCAGGACATTCTTGATCCAGGTCAGCTTCTTCCCTGAAAATAATAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR GCA 90 bp TTCTGTTACAACATGTTACTACTTGATGGCGGATACTGGGGTAATGGAAGGGGATTATCCTCAGATGCCTaGAGCTTTTCTCCTTGGGAC +
Preference number: 4 (lower is better)
Translates to: FCYNMLLLDGGYWGNGRGLSSDA*SFSPWD
Trigger: GTCCCAAGGAGAAAAGCTGCAGGCATCTGAGGATAA...TCCCCTTCCATTACCCCAGTATCCGCCATCAAGTAGTAACATGTTGTAACAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR GCA 90 bp TCTGAGAAGCATCACATCTTTTTCGACAAGGCCAGCACAATCACACCACATCAATTATCCTCAGATGCCTaGAGCTTTTCTCCTTGGGAC +
Preference number: 4 (lower is better)
Translates to: SEKHHIFFDKASTITPHQLSSDA*SFSPWD
Trigger: GTCCCAAGGAGAAAAGCTGCAGGCATCTGAGGATAA...TTGATGTGGTGTGATTGTGCTGGCCTTGTCGAAAAAGATGTGATGCTTCTCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR GCA 90 bp AATATTCCTCTCTCTACAATTGCCCTCACTTCTATTTGGGAGGAAGGAATGGCTCATGGTAAAGGGGACTaGCACGGAAAGCTGTTTGGT +
Preference number: 4 (lower is better)
Translates to: NIPLSTIALTSIWEEGMAHGKGD*HGKLFG
Trigger: ACCAAACAGCTTTCCGTGGCAGTCCCCTTTACCATG...AGCCATTCCTTCCTCCCAAATAGAAGTGAGGGCAATTGTAGAGAGAGGAATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR GCA 90 bp ATCCCAAAGTGGTTAGGGGCCTTGTCTAATGCACTTCTGAAAGTCCATTATAAATACTCTGGCCAGTTGTaGACGTTGCAGGGAGGCTAT +
Preference number: 4 (lower is better)
Translates to: IPKWLGALSNALLKVHYKYSGQL*TLQGGY
Trigger: ATAGCCTCCCTGCAACGTGCACAACTGGCCAGAGTA...TTTATAATGGACTTTCAGAAGTGCATTAGACAAGGCCCCTAACCACTTTGGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR GCA 90 bp ATATACTGGGCCAAGTGCAAACATTTATTACATCCCCTGGTGTGTGCAGAGCTCATGTGCAAGATCTTCTaGACACCTGTCCATCTCTTC +
Preference number: 4 (lower is better)
Translates to: IYWAKCKHLLHPLVCAELMCKIF*TPVHLF
Trigger: GAAGAGATGGACAGGTGTGCAGAAGATCTTGCACAT...GAGCTCTGCACACACCAGGGGATGTAATAAATGTTTGCACTTGGCCCAGTATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR GCA 90 bp TTCCCTGATGGGTCCTGGATCCTCTTCCAGCTACCTGATACCACATCTGATGGTGCACTGAAAGGAACCTaGAGTTGTATTTTTGTATCT +
Preference number: 4 (lower is better)
Translates to: FPDGSWILFQLPDTTSDGALKGT*SCIFVS
Trigger: AGATACAAAAATACAACTGCAGGTTCCTTTCAGTGC...ACCATCAGATGTGGTATCAGGTAGCTGGAAGAGGATCCAGGACCCATCAGGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR GCA 90 bp AATATTCCTCTCTCTACAATTGCCCTCACTTCTATTTGGGAGGAAGGAATGGCTAGACTGACATGGATTTaGTCACCAGCCTCATCAGGG +
Preference number: 4 (lower is better)
Translates to: NIPLSTIALTSIWEEGMARLTWI*SPASSG
Trigger: CCCTGATGAGGCTGGTGAGCAAATCCATGTCAGTCT...AGCCATTCCTTCCTCCCAAATAGAAGTGAGGGCAATTGTAGAGAGAGGAATATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR GCA 90 bp TTAGCCATTATTAGGAATGCTTTGCTGAGGAGAAATACCACTAAAATCAACACCAGGAGCTGGCAGGCATaGTCGACGCCCATTTCGGAA +
Preference number: 4 (lower is better)
Translates to: LAIIRNALLRRNTTKINTRSWQA*STPISE
Trigger: TTCCGAAATGGGCGTCGAGCATGCCTGCCAGCTCCT...GGTGTTGATTTTAGTGGTATTTCTCCTCAGCAAAGCATTCCTAATAATGGCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR GCA 90 bp AACTCAGATGCAAGGGAGGAGTTTTGGATAAATAAAATATTGCGCCATCTAGTGATTTCCTCACAGAGGTaGTGCAGGGTGTTGAGCGGC +
Preference number: 4 (lower is better)
Translates to: NSDAREEFWINKILRHLVISSQR*CRVLSG
Trigger: GCCGCTCAACACCCTGCAGCACCTCTGTGAGGAAAT...CACTAGATGGCGCAATATTTTATTTATCCAAAACTCCTCCCTTGCATCTGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR GCA 90 bp ATCCCAAAGTGGTTAGGGGCCTTGTCTAATGCACTTCTGAAAGTCCATTATAAAAACCTGGTCTCCAAATaGACTTTGCAGAGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: IPKWLGALSNALLKVHYKNLVSK*TLQRGP
Trigger: TGGCCCCCTCTGCAAAGTGCATTTGGAGACCAGGTT...TTTATAATGGACTTTCAGAAGTGCATTAGACAAGGCCCCTAACCACTTTGGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR GCA 90 bp TTCCCTGATGGGTCCTGGATCCTCTTCCAGCTACCTGATACCACATCTGATGGTATTGTTGAAGCAGAATaGTTAGATCTGGTGATGGAT +
Preference number: 4 (lower is better)
Translates to: FPDGSWILFQLPDTTSDGIVEAE*LDLVMD
Trigger: ATCCATCACCAGATCTAAGCATTCTGCTTCAACAAT...ACCATCAGATGTGGTATCAGGTAGCTGGAAGAGGATCCAGGACCCATCAGGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR GCA 90 bp AGGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCAAGTGAGCCGAGATTGTaGCATTGCGCTCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: RFSVDPETTHSYKKHNCASEPRL*HCAPAW
Trigger: CCAGGCTGGAGCGCAATGGCACAATCTCGGCTCACT...TGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR GCA 90 bp TTCCCTGATGGGTCCTGGATCCTCTTCCAGCTACCTGATACCACATCTGATGGTAATAAGCTTTCAACTTaGACAACTGCCAGTAAGTTC +
Preference number: 4 (lower is better)
Translates to: FPDGSWILFQLPDTTSDGNKLST*TTASKF
Trigger: GAACTTACTGGCAGTTGTGCAAGTTGAAAGCTTATT...ACCATCAGATGTGGTATCAGGTAGCTGGAAGAGGATCCAGGACCCATCAGGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR GCA 90 bp AACTCAGATGCAAGGGAGGAGTTTTGGATAAATAAAATATTGCGCCATCTAGTGGCCACAGGATTTCCCTaGAGGCTTTCCCTACCAGTC +
Preference number: 4 (lower is better)
Translates to: NSDAREEFWINKILRHLVATGFP*RLSLPV
Trigger: GACTGGTAGGGAAAGCCTGCAGGGAAATCCTGTGGC...CACTAGATGGCGCAATATTTTATTTATCCAAAACTCCTCCCTTGCATCTGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR GCA 90 bp TGCTTCTGTTCTCAGTGGAATTCGACTAGTGTCAGTGGAGCGGGCATGGGATTGCTCAAAATGACCGTATaGAAACGAACAGTACATAAC +
Preference number: 4 (lower is better)
Translates to: CFCSQWNSTSVSGAGMGLLKMTV*KRTVHN
Trigger: GTTATGTACTGTTCGTTTGCATACGGTCATTTTGAG...CAATCCCATGCCCGCTCCACTGACACTAGTCGAATTCCACTGAGAACAGAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR CCA 90 bp TTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGTAGCTGTCAGCTTCCTTaGAGAGGGGGACTGGCTCCG +
Preference number: 4 (lower is better)
Translates to: FQLTQKPHIAIRNIIVHSSCQLP*RGGLAP
Trigger: CGGAGCCAGTCCCCCTCTCCAAGGAAGCTGACAGCT...ACTATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CCA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCTTCTGGACATTGGTTTaGCCTATTTTCAGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVFWTLV*PIFSPS
Trigger: AGAAGGGCTGAAAATAGGCCAAACCAATGTCCAGAA...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CCA 90 bp ATCCCAAAGTGGTTAGGGGCCTTGTCTAATGCACTTCTGAAAGTCCATTATAAAGCTGCCACTTTACTCTaGCCAGTTGTGCACGTTGCA +
Preference number: 4 (lower is better)
Translates to: IPKWLGALSNALLKVHYKAATLL*PVVHVA
Trigger: TGCAACGTGCACAACTGGCCAGAGTAAAGTGGCAGC...TTTATAATGGACTTTCAGAAGTGCATTAGACAAGGCCCCTAACCACTTTGGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CCA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCTCCACAAGGTTTGACTaGCAATGTGCAAGATCTTCT +
Preference number: 4 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVSTRFD*QCARSS
Trigger: AGAAGATCTTGCACATTGCCAGTCAAACCTTGTGGA...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CCA 90 bp GTATTATTTTCAGGGAAGAAGCTGACCTGGATCAAGAATGTCCTGCTAGACCTTAGAGGCGGCTCTCATTaGCTACTTGCTGTGATAAGG +
Preference number: 4 (lower is better)
Translates to: VLFSGKKLTWIKNVLLDLRGGSH*LLAVIR
Trigger: CCTTATCACAGCAAGTAGCCAATGAGAGCCGCCTCT...AAGGTCTAGCAGGACATTCTTGATCCAGGTCAGCTTCTTCCCTGAAAATAATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR CCA 90 bp ATTATCTGGACGCAGGACAGGAAATTAACGAGCCACGTAAATACAGAGATCTACAAACAGACTCTGACATaGAGAGGCGGCTCTCATTGG +
Preference number: 4 (lower is better)
Translates to: IIWTQDRKLTSHVNTEIYKQTLT*RGGSHW
Trigger: CCAATGAGAGCCGCCTCTCCATGTCAGAGTCTGTTT...GTAGATCTCTGTATTTACGTGGCTCGTTAATTTCCTGTCCTGCGTCCAGATAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CCA 90 bp ATATACTGGGCCAAGTGCAAACATTTATTACATCCCCTGGTGTGTGCAGAGCTCAACCATGCGCTCATATaGATCATCAGTTTCCGAAGC +
Preference number: 4 (lower is better)
Translates to: IYWAKCKHLLHPLVCAELNHALI*IISFRS
Trigger: GCTTCGGAAACTGATGATCCATATGAGCGCATGGTT...GAGCTCTGCACACACCAGGGGATGTAATAAATGTTTGCACTTGGCCCAGTATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CCA 90 bp ATATACTGGGCCAAGTGCAAACATTTATTACATCCCCTGGTGTGTGCAGAGCTCAAGGACTGGGTTGAATaGCTTACTTCCTGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: IYWAKCKHLLHPLVCAELKDWVE*LTSCSE
Trigger: TTCAGAGCAGGAAGTAAGCCATTCAACCCAGTCCTT...GAGCTCTGCACACACCAGGGGATGTAATAAATGTTTGCACTTGGCCCAGTATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CCA 90 bp ATATACTGGGCCAAGTGCAAACATTTATTACATCCCCTGGTGTGTGCAGAGCTCCATAGTTTGTTGGCATaGAACCTGGTCTCCAAATGC +
Preference number: 4 (lower is better)
Translates to: IYWAKCKHLLHPLVCAELHSLLA*NLVSKC
Trigger: GCATTTGGAGACCAGGTTCCATGCCAACAAACTATG...GAGCTCTGCACACACCAGGGGATGTAATAAATGTTTGCACTTGGCCCAGTATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CCA 90 bp TGGACGCAGGACAGGAAATTAACGAGCCACGTAAATACAGAGATCTACTTAGCACAGCTCATAGTTTGTTaGCATGGAACCTGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: WTQDRKLTSHVNTEIYLAQLIVC*HGTWSP
Trigger: TGGAGACCAGGTTCCATGCCAACAAACTATGAGCTG...TGCTAAGTAGATCTCTGTATTTACGTGGCTCGTTAATTTCCTGTCCTGCGTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CCA 90 bp ATTATCTGGACGCAGGACAGGAAATTAACGAGCCACGTAAATACAGAGATCTACCAAAAATCTTTGATCTaGCCGGAACCGGGCGTCTGT +
Preference number: 4 (lower is better)
Translates to: IIWTQDRKLTSHVNTEIYQKSLI*PEPGVC
Trigger: ACAGACGCCCGGTTCCGGCCAGATCAAAGATTTTTG...GTAGATCTCTGTATTTACGTGGCTCGTTAATTTCCTGTCCTGCGTCCAGATAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CCA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCCAGAATGTGATATGTTaGCTAGCTCTACATTCCCAG +
Preference number: 4 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVQNVIC*LALHSQ
Trigger: CTGGGAATGTAGAGCTAGCCAACATATCACATTCTG...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CCA 90 bp ATATACTGGGCCAAGTGCAAACATTTATTACATCCCCTGGTGTGTGCAGAGCTCATTTATTACATCCCCTaGTGTGTGCAGAGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: IYWAKCKHLLHPLVCAELIYYIP*CVQSSA
Trigger: AGCAGAGCTCTGCACACACCAGGGGATGTAATAAAT...GAGCTCTGCACACACCAGGGGATGTAATAAATGTTTGCACTTGGCCCAGTATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CCA 90 bp TTCTGTTACAACATGTTACTACTTGATGGCGGATACTGGGGTAATGGAAGGGGAGGGTGCATATGCACGTaGCCTTCTAGAAAAATCCCA +
Preference number: 4 (lower is better)
Translates to: FCYNMLLLDGGYWGNGRGGCICT*PSRKIP
Trigger: TGGGATTTTTCTAGAAGGCCACGTGCATATGCACCC...TCCCCTTCCATTACCCCAGTATCCGCCATCAAGTAGTAACATGTTGTAACAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR TCA 90 bp ATTATCTGGACGCAGGACAGGAAATTAACGAGCCACGTAAATACAGAGATCTACGACATGATATGTCTTTaGCCTTGCTGGGGCTATCTG +
Preference number: 4 (lower is better)
Translates to: IIWTQDRKLTSHVNTEIYDMICL*PCWGYL
Trigger: CAGATAGCCCCAGCAAGGTCAAAGACATATCATGTC...GTAGATCTCTGTATTTACGTGGCTCGTTAATTTCCTGTCCTGCGTCCAGATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR TCA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCTTCATGAATCAGGTTTaGCTAGAAAAGAGCAGGCAA +
Preference number: 4 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVFMNQV*LEKSRQ
Trigger: TTGCCTGCTCTTTTCTAGTCAAACCTGATTCATGAA...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR TCA 90 bp ATCCCAAAGTGGTTAGGGGCCTTGTCTAATGCACTTCTGAAAGTCCATTATAAAGGAGTGGATGTTTTATaGGCAGGGGAAATGCCCTTC +
Preference number: 4 (lower is better)
Translates to: IPKWLGALSNALLKVHYKGVDVL*AGEMPF
Trigger: GAAGGGCATTTCCCCTGCTCATAAAACATCCACTCC...TTTATAATGGACTTTCAGAAGTGCATTAGACAAGGCCCCTAACCACTTTGGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR TCA 90 bp ATTATCTGGACGCAGGACAGGAAATTAACGAGCCACGTAAATACAGAGATCTACTTCTCCATCGTCTTGTaGCCCGCTTGTCTTTCTTTG +
Preference number: 4 (lower is better)
Translates to: IIWTQDRKLTSHVNTEIYFSIVL*PACLSL
Trigger: CAAAGAAAGACAAGCGGGTCACAAGACGATGGAGAA...GTAGATCTCTGTATTTACGTGGCTCGTTAATTTCCTGTCCTGCGTCCAGATAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR TCA 90 bp TGGACGCAGGACAGGAAATTAACGAGCCACGTAAATACAGAGATCTACTTAGCATGGCTAGGGGGAGTCTaGAATTCAATATCTGCACAA +
Preference number: 4 (lower is better)
Translates to: WTQDRKLTSHVNTEIYLAWLGGV*NSISAQ
Trigger: TTGTGCAGATATTGAATTTCAGACTCCCCCTAGCCA...TGCTAAGTAGATCTCTGTATTTACGTGGCTCGTTAATTTCCTGTCCTGCGTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR TCA 90 bp AGGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATTCTGGTTGAGTGCCTaGGACAGTGACTGTCGGAGC +
Preference number: 4 (lower is better)
Translates to: RFSVDPETTHSYKKHNCAFWLSA*DSDCRS
Trigger: GCTCCGACAGTCACTGTCTCAGGCACTCAACCAGAA...TGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000190611.9
ENST00000392505.6
ENST00000409045.7
CDS-3UTR TCA 90 bp ATCCCAAAGTGGTTAGGGGCCTTGTCTAATGCACTTCTGAAAGTCCATTATAAAGTTCAGCATTCTGGTTaGGTGCCTGAGACAGTGACT +
Preference number: 4 (lower is better)
Translates to: IPKWLGALSNALLKVHYKVQHSG*VPETVT
Trigger: AGTCACTGTCTCAGGCACTCAACCAGAATGCTGAAC...TTTATAATGGACTTTCAGAAGTGCATTAGACAAGGCCCCTAACCACTTTGGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000190611.9
ENST00000392505.6
ENST00000409045.7
CDS-3UTR TCA 90 bp ATCCCAAAGTGGTTAGGGGCCTTGTCTAATGCACTTCTGAAAGTCCATTATAAAGTGATAAGGGGAGACTaGCATGGATTTGCTCACCAG +
Preference number: 4 (lower is better)
Translates to: IPKWLGALSNALLKVHYKVIRGD*HGFAHQ
Trigger: CTGGTGAGCAAATCCATGTCAGTCTCCCCTTATCAC...TTTATAATGGACTTTCAGAAGTGCATTAGACAAGGCCCCTAACCACTTTGGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR TCA 90 bp AGGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCACTCAGAAACAGACTCTaGCATGGAGAGGCGGCTCTC +
Preference number: 4 (lower is better)
Translates to: RFSVDPETTHSYKKHNCALRNRL*HGEAAL
Trigger: GAGAGCCGCCTCTCCATGTCAGAGTCTGTTTCTGAG...TGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR TCA 90 bp AGGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCACCCCAAGGACTGGGTTaGATGGCTTACTTCCTGCTC +
Preference number: 4 (lower is better)
Translates to: RFSVDPETTHSYKKHNCAPQGLG*MAYFLL
Trigger: GAGCAGGAAGTAAGCCATTCAACCCAGTCCTTGGGG...TGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR TCA 90 bp AGCATCACATCTTTTTCGACAAGGCCAGCACAATCACACCACATCAAACAGACAATGGCTAACCTGTTCTaGGAAAAAGCGGAATCCCTT +
Preference number: 4 (lower is better)
Translates to: SITSFSTRPAQSHHIKQTMANLF*EKAESL
Trigger: AAGGGATTCCGCTTTTTCTCAGAACAGGTTAGCCAT...TGTCTGTTTGATGTGGTGTGATTGTGCTGGCCTTGTCGAAAAAGATGTGATGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR TCA 90 bp AACTCAGATGCAAGGGAGGAGTTTTGGATAAATAAAATATTGCGCCATCTAGTGTCTTCCAAAAATCTTTaGTCTGGCCGGAACCGGGCG +
Preference number: 4 (lower is better)
Translates to: NSDAREEFWINKILRHLVSSKNL*SGRNRA
Trigger: CGCCCGGTTCCGGCCAGATCAAAGATTTTTGGAAGA...CACTAGATGGCGCAATATTTTATTTATCCAAAACTCCTCCCTTGCATCTGAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR TCA 90 bp ATCAAAATATCATTTCAAGAGCAGTCATTCTGGATACCGACGGCTTTGTCAGTGAATCTGCACCCTGGGTaGCAGCATATGGAATCGATG +
Preference number: 4 (lower is better)
Translates to: IKISFQEQSFWIPTALSVNLHPG*QHMESM
Trigger: CATCGATTCCATATGCTGTCACCCAGGGTGCAGATT...CACTGACAAAGCCGTCGGTATCCAGAATGACTGCTCTTGAAATGATATTTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR TCA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCCCTCATTATCTAGGATaGCAGAGAACAAGATTAGAC +
Preference number: 4 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVPHYLG*QRTRLD
Trigger: GTCTAATCTTGTTCTCTGTCATCCTAGATAATGAGG...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR TCA 90 bp AGCATCACATCTTTTTCGACAAGGCCAGCACAATCACACCACATCAAACAGACAACCTCATCAGTCAACTaGAAAACTCCCCTTAGAGAC +
Preference number: 4 (lower is better)
Translates to: SITSFSTRPAQSHHIKQTTSSVN*KTPLRD
Trigger: GTCTCTAAGGGGAGTTTTTCAGTTGACTGATGAGGT...TGTCTGTTTGATGTGGTGTGATTGTGCTGGCCTTGTCGAAAAAGATGTGATGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR GCA 90 bp ATTATCTGGACGCAGGACAGGAAATTAACGAGCCACGTAAATACAGAGATCTACGTGTCCAAACCACCTTaGACCTTGGAGTCAAAGTCT +
Preference number: 4 (lower is better)
Translates to: IIWTQDRKLTSHVNTEIYVSKPP*TLESKS
Trigger: AGACTTTGACTCCAAGGTGCAAGGTGGTTTGGACAC...GTAGATCTCTGTATTTACGTGGCTCGTTAATTTCCTGTCCTGCGTCCAGATAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR GCA 90 bp GAAGATTTTACTGCCGCAGGGCAAGCCACCTATGGATTTAAAATGGGAATGAGATATGAGCAGGGGAAATaGCCTTCTCATCTGAACTCA +
Preference number: 4 (lower is better)
Translates to: EDFTAAGQATYGFKMGMRYEQGK*PSHLNS
Trigger: TGAGTTCAGATGAGAAGGGCATTTCCCCTGCTCATA...TCTCATTCCCATTTTAAATCCATAGGTGGCTTGCCCTGCGGCAGTAAAATCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR GCA 90 bp ATCCCAAAGTGGTTAGGGGCCTTGTCTAATGCACTTCTGAAAGTCCATTATAAACAGTTTGGAGACCCATaGATCAAACCAGTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: IPKWLGALSNALLKVHYKQFGDP*IKPVLG
Trigger: TCCCAGGACTGGTTTGATGCATGGGTCTCCAAACTG...TTTATAATGGACTTTCAGAAGTGCATTAGACAAGGCCCCTAACCACTTTGGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR GCA 90 bp TTAGCCATTATTAGGAATGCTTTGCTGAGGAGAAATACCACTAAAATCAACACCCAGGGAGGCTATTGCTaGATGGTAAAGGGGACTGCC +
Preference number: 4 (lower is better)
Translates to: LAIIRNALLRRNTTKINTQGGYC*MVKGTA
Trigger: GGCAGTCCCCTTTACCATGCAGCAATAGCCTCCCTG...GGTGTTGATTTTAGTGGTATTTCTCCTCAGCAAAGCATTCCTAATAATGGCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR GCA 90 bp ATCCCAAAGTGGTTAGGGGCCTTGTCTAATGCACTTCTGAAAGTCCATTATAAATTGCAGGGAGGCTATTaGTGCATGGTAAAGGGGACT +
Preference number: 4 (lower is better)
Translates to: IPKWLGALSNALLKVHYKLQGGY*CMVKGT
Trigger: AGTCCCCTTTACCATGCAGCAATAGCCTCCCTGCAA...TTTATAATGGACTTTCAGAAGTGCATTAGACAAGGCCCCTAACCACTTTGGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR GCA 90 bp AGGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCAGCCAGTTGTGCACGTTaGAGGGAGGCTATTGCTGCA +
Preference number: 4 (lower is better)
Translates to: RFSVDPETTHSYKKHNCAASCAR*REAIAA
Trigger: TGCAGCAATAGCCTCCCTGCAACGTGCACAACTGGC...TGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR GCA 90 bp GGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATGCCAGTTGTGCACGTTaGAGGGAGGCTATTGCTGCA +
Preference number: 4 (lower is better)
Translates to: GFQLTQKPHIAIRNIIVHASCAR*REAIAA
Trigger: TGCAGCAATAGCCTCCCTGCAACGTGCACAACTGGC...ATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR GCA 90 bp TGGACGCAGGACAGGAAATTAACGAGCCACGTAAATACAGAGATCTACTTAGCAGTCAGTAAAGTTAGGTaGCGACTGAGTTCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: WTQDRKLTSHVNTEIYLAVSKVR*RLSSLK
Trigger: CTTCAGAGAACTCAGTCGGCACCTAACTTTACTGAC...TGCTAAGTAGATCTCTGTATTTACGTGGCTCGTTAATTTCCTGTCCTGCGTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR GCA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCCTGAAATTCAATATCTaGACAAAGGTTGGGGTTGGA +
Preference number: 4 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVLKFNI*TKVGVG
Trigger: TCCAACCCCAACCTTTGTGCAGATATTGAATTTCAG...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR GCA 90 bp AGGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCAGCCGTGCCATCTGCGTaGTGTGGCCTTTACTGTGAT +
Preference number: 4 (lower is better)
Translates to: RFSVDPETTHSYKKHNCAAVPSA*CGLYCD
Trigger: ATCACAGTAAAGGCCACAGCACGCAGATGGCACGGC...TGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR GCA 90 bp TTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGTAGGAGCTGGCAGGCATaGTCGACGCCCATTTCGGAA +
Preference number: 4 (lower is better)
Translates to: FQLTQKPHIAIRNIIVHSRSWQA*STPISE
Trigger: TTCCGAAATGGGCGTCGAGCATGCCTGCCAGCTCCT...ACTATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR GCA 90 bp ATCCCAAAGTGGTTAGGGGCCTTGTCTAATGCACTTCTGAAAGTCCATTATAAACGGCAACGAGAACCATaGGCTCATATGGATCATCAG +
Preference number: 4 (lower is better)
Translates to: IPKWLGALSNALLKVHYKRQREP*AHMDHQ
Trigger: CTGATGATCCATATGAGCGCATGGTTCTCGTTGCCG...TTTATAATGGACTTTCAGAAGTGCATTAGACAAGGCCCCTAACCACTTTGGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR GCA 90 bp TTCCCTGATGGGTCCTGGATCCTCTTCCAGCTACCTGATACCACATCTGATGGTTCCTTTGGTTTCTCTTaGCCAGAAAATTGCATTTTT +
Preference number: 4 (lower is better)
Translates to: FPDGSWILFQLPDTTSDGSFGFS*PENCIF
Trigger: AAAAATGCAATTTTCTGGGCAAGAGAAACCAAAGGA...ACCATCAGATGTGGTATCAGGTAGCTGGAAGAGGATCCAGGACCCATCAGGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR GCA 90 bp AATATTCCTCTCTCTACAATTGCCCTCACTTCTATTTGGGAGGAAGGAATGGCTTTTAAGACAGGAACTTaGTCTGTCGTCCAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: NIPLSTIALTSIWEEGMAFKTGT*SVVQAQ
Trigger: CTGAGCCTGGACGACAGAGCAAGTTCCTGTCTTAAA...AGCCATTCCTTCCTCCCAAATAGAAGTGAGGGCAATTGTAGAGAGAGGAATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR CCA 90 bp AGGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATGTTTTCCCAGCAAGTaGCAGAACCTGGAGGGCGAG +
Preference number: 4 (lower is better)
Translates to: RFSVDPETTHSYKKHNCACFPSK*QNLEGE
Trigger: CTCGCCCTCCAGGTTCTGCCACTTGCTGGGAAAACA...TGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
CDS-3UTR CCA 90 bp GGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATTGTTTTCCCAGCAAGTaGCAGAACCTGGAGGGCGAG +
Preference number: 4 (lower is better)
Translates to: GFQLTQKPHIAIRNIIVHCFPSK*QNLEGE
Trigger: CTCGCCCTCCAGGTTCTGCCACTTGCTGGGAAAACA...ATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
CDS-3UTR CCA 90 bp ATCCCAAAGTGGTTAGGGGCCTTGTCTAATGCACTTCTGAAAGTCCATTATAAACTTGCTGGGGCTATCTaGGTAAATTATAGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: IPKWLGALSNALLKVHYKLAGAI*VNYRGG
Trigger: GCCACCCCTATAATTTACCCAGATAGCCCCAGCAAG...TTTATAATGGACTTTCAGAAGTGCATTAGACAAGGCCCCTAACCACTTTGGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CCA 90 bp TGGACGCAGGACAGGAAATTAACGAGCCACGTAAATACAGAGATCTACTTAGCAAACCACCTTGCACCTTaGAGTCAAAGTCTTCCAAGT +
Preference number: 4 (lower is better)
Translates to: WTQDRKLTSHVNTEIYLANHLAP*SQSLPS
Trigger: ACTTGGAAGACTTTGACTCCAAGGTGCAAGGTGGTT...TGCTAAGTAGATCTCTGTATTTACGTGGCTCGTTAATTTCCTGTCCTGCGTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CCA 90 bp TCTGAGAAGCATCACATCTTTTTCGACAAGGCCAGCACAATCACACCACATCAAGGCACTTCTATGGGTTaGAGTGGATGTTTTATGAGC +
Preference number: 4 (lower is better)
Translates to: SEKHHIFFDKASTITPHQGTSMG*SGCFMS
Trigger: GCTCATAAAACATCCACTCCAACCCATAGAAGTGCC...TTGATGTGGTGTGATTGTGCTGGCCTTGTCGAAAAAGATGTGATGCTTCTCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CCA 90 bp TGGACGCAGGACAGGAAATTAACGAGCCACGTAAATACAGAGATCTACTTAGCAGAGGAGGCACTTCTATaGGTTGGAGTGGATGTTTTA +
Preference number: 4 (lower is better)
Translates to: WTQDRKLTSHVNTEIYLAEEALL*VGVDVL
Trigger: TAAAACATCCACTCCAACCCATAGAAGTGCCTCCTC...TGCTAAGTAGATCTCTGTATTTACGTGGCTCGTTAATTTCCTGTCCTGCGTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CCA 90 bp AGCATCACATCTTTTTCGACAAGGCCAGCACAATCACACCACATCAAACAGACAGAGGAGGCACTTCTATaGGTTGGAGTGGATGTTTTA +
Preference number: 4 (lower is better)
Translates to: SITSFSTRPAQSHHIKQTEEALL*VGVDVL
Trigger: TAAAACATCCACTCCAACCCATAGAAGTGCCTCCTC...TGTCTGTTTGATGTGGTGTGATTGTGCTGGCCTTGTCGAAAAAGATGTGATGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CCA 90 bp ATCCCAAAGTGGTTAGGGGCCTTGTCTAATGCACTTCTGAAAGTCCATTATAAATGCCTACTGTCCCTTTaGGAGGATGTTGAAGAGGAG +
Preference number: 4 (lower is better)
Translates to: IPKWLGALSNALLKVHYKCLLSL*EDVEEE
Trigger: CTCCTCTTCAACATCCTCCCAAAGGGACAGTAGGCA...TTTATAATGGACTTTCAGAAGTGCATTAGACAAGGCCCCTAACCACTTTGGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CCA 90 bp TCTGAGAAGCATCACATCTTTTTCGACAAGGCCAGCACAATCACACCACATCAACTGGTTTCTGGACATTaGTTTGGCCTATTTTCAGCC +
Preference number: 4 (lower is better)
Translates to: SEKHHIFFDKASTITPHQLVSGH*FGLFSA
Trigger: GGCTGAAAATAGGCCAAACCAATGTCCAGAAACCAG...TTGATGTGGTGTGATTGTGCTGGCCTTGTCGAAAAAGATGTGATGCTTCTCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CCA 90 bp TGGACGCAGGACAGGAAATTAACGAGCCACGTAAATACAGAGATCTACTTAGCACCACGGAAAGCTGTTTaGTTGCATCTTTCCATCCAT +
Preference number: 4 (lower is better)
Translates to: WTQDRKLTSHVNTEIYLAPRKAV*LHLSIH
Trigger: ATGGATGGAAAGATGCAACCAAACAGCTTTCCGTGG...TGCTAAGTAGATCTCTGTATTTACGTGGCTCGTTAATTTCCTGTCCTGCGTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CCA 90 bp AATATTCCTCTCTCTACAATTGCCCTCACTTCTATTTGGGAGGAAGGAATGGCTGGTGCTTCCAGACAGTaGAACAATCGTGTGGTTTCT +
Preference number: 4 (lower is better)
Translates to: NIPLSTIALTSIWEEGMAGASRQ*NNRVVS
Trigger: AGAAACCACACGATTGTTCCACTGTCTGGAAGCACC...AGCCATTCCTTCCTCCCAAATAGAAGTGAGGGCAATTGTAGAGAGAGGAATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR CCA 90 bp AACTCAGATGCAAGGGAGGAGTTTTGGATAAATAAAATATTGCGCCATCTAGTGTTCCCTGATGGGTCCTaGATCCTCTTCCAGCTACCT +
Preference number: 4 (lower is better)
Translates to: NSDAREEFWINKILRHLVFPDGS*ILFQLP
Trigger: AGGTAGCTGGAAGAGGATCCAGGACCCATCAGGGAA...CACTAGATGGCGCAATATTTTATTTATCCAAAACTCCTCCCTTGCATCTGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CCA 90 bp GGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGCCTCTACCAGTGCTaGTGTGTGCCATTGATCCGC +
Preference number: 4 (lower is better)
Translates to: GFQLTQKPHIAIRNIIVHSLYQC*CVPLIR
Trigger: GCGGATCAATGGCACACACCAGCACTGGTAGAGGCT...ATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CCA 90 bp ATCAAAATATCATTTCAAGAGCAGTCATTCTGGATACCGACGGCTTTGTCAGTGGAATCGATGAGCTTCTaGTCAGCCTCTACCAGTGCT +
Preference number: 4 (lower is better)
Translates to: IKISFQEQSFWIPTALSVESMSF*SASTSA
Trigger: AGCACTGGTAGAGGCTGACCAGAAGCTCATCGATTC...CACTGACAAAGCCGTCGGTATCCAGAATGACTGCTCTTGAAATGATATTTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR CCA 90 bp GAAGATTTTACTGCCGCAGGGCAAGCCACCTATGGATTTAAAATGGGAATGAGACAAAAATTAGCTAGGTaGGTGGCACACGCCTGTAAA +
Preference number: 4 (lower is better)
Translates to: EDFTAAGQATYGFKMGMRQKLAR*VAHACK
Trigger: TTTACAGGCGTGTGCCACCCACCTAGCTAATTTTTG...TCTCATTCCCATTTTAAATCCATAGGTGGCTTGCCCTGCGGCAGTAAAATCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR CCA 90 bp TTAGCCATTATTAGGAATGCTTTGCTGAGGAGAAATACCACTAAAATCAACACCCTTGATGGCGGATACTaGGGTAATGGAAGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: LAIIRNALLRRNTTKINTLDGGY*GNGRGG
Trigger: CCCTCCCCTTCCATTACCCCAGTATCCGCCATCAAG...GGTGTTGATTTTAGTGGTATTTCTCCTCAGCAAAGCATTCCTAATAATGGCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000190611.9
3UTR CAA 72 bp CTTAATGGGATTCTTTCTGTTACAACATGTTACTACTaGATGGCGGATACTGGGGTAATGGAAGGGGAGGGT +
Preference number: 4 (lower is better)
Translates to: LNGILSVTTCYY*MADTGVMEGEG
Trigger: ACCCTCCCCTTCCATTACCCCAGTATCCGCCATCAAGTAGTAACATGTTGTAACAGAAAGAATCCCATTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR TCA 90 bp TTCTGTTACAACATGTTACTACTTGATGGCGGATACTGGGGTAATGGAAGGGGATTTCTCCTTGGGACATaGTATGTCTTTGACCTTGCT +
Preference number: 4 (lower is better)
Translates to: FCYNMLLLDGGYWGNGRGFLLGT*YVFDLA
Trigger: AGCAAGGTCAAAGACATATCATGTCCCAAGGAGAAA...TCCCCTTCCATTACCCCAGTATCCGCCATCAAGTAGTAACATGTTGTAACAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR TCA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCGTTGAAGGAAATATGTaGAAACTAGCATCTCTTGGT +
Preference number: 4 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVVEGNM*KLASLG
Trigger: ACCAAGAGATGCTAGTTTTCACATATTTCCTTCAAC...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR TCA 90 bp GTATTATTTTCAGGGAAGAAGCTGACCTGGATCAAGAATGTCCTGCTAGACCTTAAGTTCCACAAGGTTTaGCTGGCAATGTGCAAGATC +
Preference number: 4 (lower is better)
Translates to: VLFSGKKLTWIKNVLLDLKFHKV*LAMCKI
Trigger: GATCTTGCACATTGCCAGTCAAACCTTGTGGAACTT...AAGGTCTAGCAGGACATTCTTGATCCAGGTCAGCTTCTTCCCTGAAAATAATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR TCA 90 bp AATATTCCTCTCTCTACAATTGCCCTCACTTCTATTTGGGAGGAAGGAATGGCTTGGCTAGGGGGAGTCTaGAATTCAATATCTGCACAA +
Preference number: 4 (lower is better)
Translates to: NIPLSTIALTSIWEEGMAWLGGV*NSISAQ
Trigger: TTGTGCAGATATTGAATTTCAGACTCCCCCTAGCCA...AGCCATTCCTTCCTCCCAAATAGAAGTGAGGGCAATTGTAGAGAGAGGAATATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR TCA 90 bp AGGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCACTGTGGCCTTTACTGTaGTCCTGCTCGGAAACCATC +
Preference number: 4 (lower is better)
Translates to: RFSVDPETTHSYKKHNCALWPLL*SCSETI
Trigger: GATGGTTTCCGAGCAGGATCACAGTAAAGGCCACAG...TGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR TCA 90 bp TTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGTTTCTGGTTGAGTGCCTaGGACAGTGACTGTCGGAGC +
Preference number: 4 (lower is better)
Translates to: FQLTQKPHIAIRNIIVHSFWLSA*DSDCRS
Trigger: GCTCCGACAGTCACTGTCTCAGGCACTCAACCAGAA...ACTATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000190611.9
ENST00000392505.6
ENST00000409045.7
CDS-3UTR TCA 90 bp ATATACTGGGCCAAGTGCAAACATTTATTACATCCCCTGGTGTGTGCAGAGCTCTATCACTCACATCACTaGTGTAAGACTCATCATCTG +
Preference number: 4 (lower is better)
Translates to: IYWAKCKHLLHPLVCAELYHSHH*CKTHHL
Trigger: CAGATGATGAGTCTTACATCAGTGATGTGAGTGATA...GAGCTCTGCACACACCAGGGGATGTAATAAATGTTTGCACTTGGCCCAGTATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR TCA 90 bp GGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATGGTGGAGCAGTATCCTaGAACTGCAAATGCGGCAAC +
Preference number: 4 (lower is better)
Translates to: GFQLTQKPHIAIRNIIVHGGAVS*NCKCGN
Trigger: GTTGCCGCATTTGCAGTTTCAGGATACTGCTCCACC...ATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR TCA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCAAACACAAAATTCTTTaGTTCACAGTGACAGGCAGA +
Preference number: 4 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVKHKIL*FTVTGR
Trigger: TCTGCCTGTCACTGTGAATCAAAGAATTTTGTGTTT...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR TCA 90 bp TTAGCCATTATTAGGAATGCTTTGCTGAGGAGAAATACCACTAAAATCAACACCTCTTCCAAAAATCTTTaGTCTGGCCGGAACCGGGCG +
Preference number: 4 (lower is better)
Translates to: LAIIRNALLRRNTTKINTSSKNL*SGRNRA
Trigger: CGCCCGGTTCCGGCCAGATCAAAGATTTTTGGAAGA...GGTGTTGATTTTAGTGGTATTTCTCCTCAGCAAAGCATTCCTAATAATGGCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR TCA 90 bp AGGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATCTTCCAAAAATCTTTaGTCTGGCCGGAACCGGGCG +
Preference number: 4 (lower is better)
Translates to: RFSVDPETTHSYKKHNCASSKNL*SGRNRA
Trigger: CGCCCGGTTCCGGCCAGATCAAAGATTTTTGGAAGA...TGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR TCA 90 bp AGCATCACATCTTTTTCGACAAGGCCAGCACAATCACACCACATCAAACAGACATTCTCATTCTCATCTTaGAGTCCTCATCAGAGTGTC +
Preference number: 4 (lower is better)
Translates to: SITSFSTRPAQSHHIKQTFSFSS*SPHQSV
Trigger: GACACTCTGATGAGGACTTCAAGATGAGAATGAGAA...TGTCTGTTTGATGTGGTGTGATTGTGCTGGCCTTGTCGAAAAAGATGTGATGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR TCA 90 bp ATCCCAAAGTGGTTAGGGGCCTTGTCTAATGCACTTCTGAAAGTCCATTATAAAAGCATATGGAATCGATaGGCTTCTGGTCAGCCTCTA +
Preference number: 4 (lower is better)
Translates to: IPKWLGALSNALLKVHYKSIWNR*ASGQPL
Trigger: TAGAGGCTGACCAGAAGCTCATCGATTCCATATGCT...TTTATAATGGACTTTCAGAAGTGCATTAGACAAGGCCCCTAACCACTTTGGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR GCA 90 bp AGGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATCCGGTTCTAGCAATTaGCGACTTACAGAGGGCTCG +
Preference number: 4 (lower is better)
Translates to: RFSVDPETTHSYKKHNCASGSSN*RLTEGS
Trigger: CGAGCCCTCTGTAAGTCGGCAATTGCTAGAACCGGA...TGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR GCA 90 bp TTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGTCAGGGAGGCTATTGCTaGATGGTAAAGGGGACTGCC +
Preference number: 4 (lower is better)
Translates to: FQLTQKPHIAIRNIIVHSQGGYC*MVKGTA
Trigger: GGCAGTCCCCTTTACCATGCAGCAATAGCCTCCCTG...ACTATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR GCA 90 bp GGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATTACTCTGGCCAGTTGTaGACGTTGCAGGGAGGCTAT +
Preference number: 4 (lower is better)
Translates to: GFQLTQKPHIAIRNIIVHYSGQL*TLQGGY
Trigger: ATAGCCTCCCTGCAACGTGCACAACTGGCCAGAGTA...ATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR GCA 90 bp AGGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATACTCTGGCCAGTTGTaGACGTTGCAGGGAGGCTAT +
Preference number: 4 (lower is better)
Translates to: RFSVDPETTHSYKKHNCAYSGQL*TLQGGY
Trigger: ATAGCCTCCCTGCAACGTGCACAACTGGCCAGAGTA...TGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR GCA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCGCACTGAAAGGAACCTaGAGTTGTATTTTTGTATCT +
Preference number: 4 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVALKGT*SCIFVS
Trigger: AGATACAAAAATACAACTGCAGGTTCCTTTCAGTGC...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000409631.5
CDS-3UTR GCA 90 bp ATATACTGGGCCAAGTGCAAACATTTATTACATCCCCTGGTGTGTGCAGAGCTCCTGAAATTCAATATCTaGACAAAGGTTGGGGTTGGA +
Preference number: 4 (lower is better)
Translates to: IYWAKCKHLLHPLVCAELLKFNI*TKVGVG
Trigger: TCCAACCCCAACCTTTGTGCAGATATTGAATTTCAG...GAGCTCTGCACACACCAGGGGATGTAATAAATGTTTGCACTTGGCCCAGTATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR GCA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCGACTTCAAAAGAGAATaGACTTTCTGTGCGATTAGA +
Preference number: 4 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVDFKRE*TFCAIR
Trigger: TCTAATCGCACAGAAAGTGCATTCTCTTTTGAAGTC...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR GCA 90 bp ATCCCAAAGTGGTTAGGGGCCTTGTCTAATGCACTTCTGAAAGTCCATTATAAATGCTCGGAAACCATCTaGTTCAGCTTCTCCTTCTCT +
Preference number: 4 (lower is better)
Translates to: IPKWLGALSNALLKVHYKCSETI*FSFSFS
Trigger: AGAGAAGGAGAAGCTGAAGCAGATGGTTTCCGAGCA...TTTATAATGGACTTTCAGAAGTGCATTAGACAAGGCCCCTAACCACTTTGGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR GCA 90 bp ATCAAAATATCATTTCAAGAGCAGTCATTCTGGATACCGACGGCTTTGTCAGTGCTCTCATTGGCTACTTaGTGTGATAAGGGGAGACTG +
Preference number: 4 (lower is better)
Translates to: IKISFQEQSFWIPTALSVLSLAT*CDKGRL
Trigger: CAGTCTCCCCTTATCACAGCAAGTAGCCAATGAGAG...CACTGACAAAGCCGTCGGTATCCAGAATGACTGCTCTTGAAATGATATTTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR GCA 90 bp TGGACGCAGGACAGGAAATTAACGAGCCACGTAAATACAGAGATCTACTTAGCACCGAGAAATATTGTCTaGAACACTGGTGTTGTCTTC +
Preference number: 4 (lower is better)
Translates to: WTQDRKLTSHVNTEIYLAPRNIV*NTGVVF
Trigger: GAAGACAACACCAGTGTTGCAGACAATATTTCTCGG...TGCTAAGTAGATCTCTGTATTTACGTGGCTCGTTAATTTCCTGTCCTGCGTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR GCA 90 bp TTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGTATTTCCTCACAGAGGTaGTGCAGGGTGTTGAGCGGC +
Preference number: 4 (lower is better)
Translates to: FQLTQKPHIAIRNIIVHSISSQR*CRVLSG
Trigger: GCCGCTCAACACCCTGCAGCACCTCTGTGAGGAAAT...ACTATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR GCA 90 bp ATCCCAAAGTGGTTAGGGGCCTTGTCTAATGCACTTCTGAAAGTCCATTATAAACTGCTCCTTTTATTCTaGTTTCCAAGGACGGTGTGG +
Preference number: 4 (lower is better)
Translates to: IPKWLGALSNALLKVHYKLLLLF*FPRTVW
Trigger: CCACACCGTCCTTGGAAAGCAGAATAAAAGGAGCAG...TTTATAATGGACTTTCAGAAGTGCATTAGACAAGGCCCCTAACCACTTTGGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR GCA 90 bp TGGACGCAGGACAGGAAATTAACGAGCCACGTAAATACAGAGATCTACTTAGCAACACTTCTGCTTTCCTaGTTTGGGATGGATACATTC +
Preference number: 4 (lower is better)
Translates to: WTQDRKLTSHVNTEIYLATLLLS*FGMDTF
Trigger: GAATGTATCCATCCCAAAGCAGGAAAGCAGAAGTGT...TGCTAAGTAGATCTCTGTATTTACGTGGCTCGTTAATTTCCTGTCCTGCGTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR GCA 90 bp AGGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCAAGGGGAAGATTTTACTaGCGCAGGGCAAGCCACCTA +
Preference number: 4 (lower is better)
Translates to: RFSVDPETTHSYKKHNCARGRFY*RRASHL
Trigger: TAGGTGGCTTGCCCTGCGGCAGTAAAATCTTCCCCT...TGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR GCA 90 bp GGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGGGGAAGATTTTACTaGCGCAGGGCAAGCCACCTA +
Preference number: 4 (lower is better)
Translates to: GFQLTQKPHIAIRNIIVHRGRFY*RRASHL
Trigger: TAGGTGGCTTGCCCTGCGGCAGTAAAATCTTCCCCT...ATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CCA 90 bp TTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGTTGTTTTCCCAGCAAGTaGCAGAACCTGGAGGGCGAG +
Preference number: 4 (lower is better)
Translates to: FQLTQKPHIAIRNIIVHSCFPSK*QNLEGE
Trigger: CTCGCCCTCCAGGTTCTGCCACTTGCTGGGAAAACA...ACTATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
CDS-3UTR CCA 90 bp ATCCCAAAGTGGTTAGGGGCCTTGTCTAATGCACTTCTGAAAGTCCATTATAAAGATGATGTCGCAGTTTaGAGACCCATGCATCAAACC +
Preference number: 4 (lower is better)
Translates to: IPKWLGALSNALLKVHYKDDVAV*RPMHQT
Trigger: GGTTTGATGCATGGGTCTCCAAACTGCGACATCATC...TTTATAATGGACTTTCAGAAGTGCATTAGACAAGGCCCCTAACCACTTTGGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CCA 90 bp ATTATCTGGACGCAGGACAGGAAATTAACGAGCCACGTAAATACAGAGATCTACCCACGGAAAGCTGTTTaGTTGCATCTTTCCATCCAT +
Preference number: 4 (lower is better)
Translates to: IIWTQDRKLTSHVNTEIYPRKAV*LHLSIH
Trigger: ATGGATGGAAAGATGCAACCAAACAGCTTTCCGTGG...GTAGATCTCTGTATTTACGTGGCTCGTTAATTTCCTGTCCTGCGTCCAGATAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CCA 90 bp GGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATGCTGCCACTTTACTCTaGCCAGTTGTGCACGTTGCA +
Preference number: 4 (lower is better)
Translates to: GFQLTQKPHIAIRNIIVHAATLL*PVVHVA
Trigger: TGCAACGTGCACAACTGGCCAGAGTAAAGTGGCAGC...ATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CCA 90 bp GAAGATTTTACTGCCGCAGGGCAAGCCACCTATGGATTTAAAATGGGAATGAGATCTATCACCACCCCCTaGACTTCATTCATGTTAGAA +
Preference number: 4 (lower is better)
Translates to: EDFTAAGQATYGFKMGMRSITTP*TSFMLE
Trigger: TTCTAACATGAATGAAGTCCAGGGGGTGGTGATAGA...TCTCATTCCCATTTTAAATCCATAGGTGGCTTGCCCTGCGGCAGTAAAATCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CCA 90 bp TTCTGTTACAACATGTTACTACTTGATGGCGGATACTGGGGTAATGGAAGGGGACAGAATGTGATATGTTaGCTAGCTCTACATTCCCAG +
Preference number: 4 (lower is better)
Translates to: FCYNMLLLDGGYWGNGRGQNVIC*LALHSQ
Trigger: CTGGGAATGTAGAGCTAGCCAACATATCACATTCTG...TCCCCTTCCATTACCCCAGTATCCGCCATCAAGTAGTAACATGTTGTAACAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR CCA 90 bp GGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATTCCTGCGATAGGGGATaGTGCTTCCAGACAGTGGAA +
Preference number: 4 (lower is better)
Translates to: GFQLTQKPHIAIRNIIVHSCDRG*CFQTVE
Trigger: TTCCACTGTCTGGAAGCACCATCCCCTATCGCAGGA...ATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CCA 90 bp GGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGCGCCACCACCAAGTaGTGTTACATCACCAGAAGC +
Preference number: 4 (lower is better)
Translates to: GFQLTQKPHIAIRNIIVHSATTK*CYITRS
Trigger: GCTTCTGGTGATGTAACACCACTTGGTGGTGGCGCT...ATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR CCA 90 bp ATTATCTGGACGCAGGACAGGAAATTAACGAGCCACGTAAATACAGAGATCTACTTACAGGGCTGGCGTTaGGACAGAAGTCAAGAAAAT +
Preference number: 4 (lower is better)
Translates to: IIWTQDRKLTSHVNTEIYLQGWR*DRSQEN
Trigger: ATTTTCTTGACTTCTGTCCCAACGCCAGCCCTGTAA...GTAGATCTCTGTATTTACGTGGCTCGTTAATTTCCTGTCCTGCGTCCAGATAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR CCA 90 bp ATCAAAATATCATTTCAAGAGCAGTCATTCTGGATACCGACGGCTTTGTCAGTGGGGAAGAAGCTGACCTaGATCAAGAATGTCCTGCTA +
Preference number: 4 (lower is better)
Translates to: IKISFQEQSFWIPTALSVGKKLT*IKNVLL
Trigger: TAGCAGGACATTCTTGATCCAGGTCAGCTTCTTCCC...CACTGACAAAGCCGTCGGTATCCAGAATGACTGCTCTTGAAATGATATTTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR TCA 90 bp TGGACGCAGGACAGGAAATTAACGAGCCACGTAAATACAGAGATCTACTTAGCATTCATGAATCAGGTTTaGCTAGAAAAGAGCAGGCAA +
Preference number: 4 (lower is better)
Translates to: WTQDRKLTSHVNTEIYLAFMNQV*LEKSRQ
Trigger: TTGCCTGCTCTTTTCTAGTCAAACCTGATTCATGAA...TGCTAAGTAGATCTCTGTATTTACGTGGCTCGTTAATTTCCTGTCCTGCGTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR TCA 90 bp AGGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCAGGAGTGGATGTTTTATaGGCAGGGGAAATGCCCTTC +
Preference number: 4 (lower is better)
Translates to: RFSVDPETTHSYKKHNCAGVDVL*AGEMPF
Trigger: GAAGGGCATTTCCCCTGCTCATAAAACATCCACTCC...TGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR TCA 90 bp AGGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCAGTCCTCTCCAGTATGTaGATACTCTGCCTACTGTCC +
Preference number: 4 (lower is better)
Translates to: RFSVDPETTHSYKKHNCAVLSSM*ILCLLS
Trigger: GGACAGTAGGCAGAGTATTCACATACTGGAGAGGAC...TGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR TCA 90 bp TCTGAGAAGCATCACATCTTTTTCGACAAGGCCAGCACAATCACACCACATCAATTCAGCTGTGGACGTTaGAGGAAATATGTGAAAACT +
Preference number: 4 (lower is better)
Translates to: SEKHHIFFDKASTITPHQFSCGR*RKYVKT
Trigger: AGTTTTCACATATTTCCTTCAACGTCCACAGCTGAA...TTGATGTGGTGTGATTGTGCTGGCCTTGTCGAAAAAGATGTGATGCTTCTCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR TCA 90 bp AGCATCACATCTTTTTCGACAAGGCCAGCACAATCACACCACATCAAACAGACATTCAGCTGTGGACGTTaGAGGAAATATGTGAAAACT +
Preference number: 4 (lower is better)
Translates to: SITSFSTRPAQSHHIKQTFSCGR*RKYVKT
Trigger: AGTTTTCACATATTTCCTTCAACGTCCACAGCTGAA...TGTCTGTTTGATGTGGTGTGATTGTGCTGGCCTTGTCGAAAAAGATGTGATGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR TCA 90 bp GGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAACATTAGCAGCTGGTaGGGATTCAGCTGTGGACGT +
Preference number: 4 (lower is better)
Translates to: GFQLTQKPHIAIRNIIVHNISSW*GFSCGR
Trigger: ACGTCCACAGCTGAATCCTCACCAGCTGCTAATGTT...ATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR TCA 90 bp ATCCCAAAGTGGTTAGGGGCCTTGTCTAATGCACTTCTGAAAGTCCATTATAAAAAGTTCCACAAGGTTTaGCTGGCAATGTGCAAGATC +
Preference number: 4 (lower is better)
Translates to: IPKWLGALSNALLKVHYKKFHKV*LAMCKI
Trigger: GATCTTGCACATTGCCAGTCAAACCTTGTGGAACTT...TTTATAATGGACTTTCAGAAGTGCATTAGACAAGGCCCCTAACCACTTTGGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR TCA 90 bp GGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATATGCAAGCGAACTGGTaGCATGGTAGCACTGAAAGG +
Preference number: 4 (lower is better)
Translates to: GFQLTQKPHIAIRNIIVHMQANW*HGSTER
Trigger: CCTTTCAGTGCTACCATGTCACCAGTTCGCTTGCAT...ATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR TCA 90 bp TTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGTCTGTGGCCTTTACTGTaGTCCTGCTCGGAAACCATC +
Preference number: 4 (lower is better)
Translates to: FQLTQKPHIAIRNIIVHSLWPLL*SCSETI
Trigger: GATGGTTTCCGAGCAGGATCACAGTAAAGGCCACAG...ACTATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR TCA 90 bp GGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATGTGATAAGGGGAGACTaGCATGGATTTGCTCACCAG +
Preference number: 4 (lower is better)
Translates to: GFQLTQKPHIAIRNIIVHVIRGD*HGFAHQ
Trigger: CTGGTGAGCAAATCCATGTCAGTCTCCCCTTATCAC...ATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR TCA 90 bp TTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGTGGTGGAGCAGTATCCTaGAACTGCAAATGCGGCAAC +
Preference number: 4 (lower is better)
Translates to: FQLTQKPHIAIRNIIVHSGGAVS*NCKCGN
Trigger: GTTGCCGCATTTGCAGTTTCAGGATACTGCTCCACC...ACTATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR TCA 90 bp GGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATGCAGAAATGGGTGGATaGTGGCTAACCTGTTCTGAG +
Preference number: 4 (lower is better)
Translates to: GFQLTQKPHIAIRNIIVHAEMGG*WLTCSE
Trigger: CTCAGAACAGGTTAGCCATCATCCACCCATTTCTGC...ATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR TCA 90 bp ATATACTGGGCCAAGTGCAAACATTTATTACATCCCCTGGTGTGTGCAGAGCTCAAACACAAAATTCTTTaGTTCACAGTGACAGGCAGA +
Preference number: 4 (lower is better)
Translates to: IYWAKCKHLLHPLVCAELKHKIL*FTVTGR
Trigger: TCTGCCTGTCACTGTGAATCAAAGAATTTTGTGTTT...GAGCTCTGCACACACCAGGGGATGTAATAAATGTTTGCACTTGGCCCAGTATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR TCA 90 bp AGCATCACATCTTTTTCGACAAGGCCAGCACAATCACACCACATCAAACAGACATGTGTATGCAAGTGGTaGCTTTATTCCACACATAGT +
Preference number: 4 (lower is better)
Translates to: SITSFSTRPAQSHHIKQTCVCKW*LYSTHS
Trigger: ACTATGTGTGGAATAAAGTCACCACTTGCATACACA...TGTCTGTTTGATGTGGTGTGATTGTGCTGGCCTTGTCGAAAAAGATGTGATGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR TCA 90 bp AGGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCAAATCTGCACCCTGGGTaGCAGCATATGGAATCGATG +
Preference number: 4 (lower is better)
Translates to: RFSVDPETTHSYKKHNCANLHPG*QHMESM
Trigger: CATCGATTCCATATGCTGTCACCCAGGGTGCAGATT...TGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR TCA 90 bp AACTCAGATGCAAGGGAGGAGTTTTGGATAAATAAAATATTGCGCCATCTAGTGTTTCAGGGAAGAAGCTaGCCTGGATCAAGAATGTCC +
Preference number: 4 (lower is better)
Translates to: NSDAREEFWINKILRHLVFQGRS*PGSRMS
Trigger: GGACATTCTTGATCCAGGTCAGCTTCTTCCCTGAAA...CACTAGATGGCGCAATATTTTATTTATCCAAAACTCCTCCCTTGCATCTGAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR GCA 90 bp TTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGTTCCGGTTCTAGCAATTaGCGACTTACAGAGGGCTCG +
Preference number: 4 (lower is better)
Translates to: FQLTQKPHIAIRNIIVHSSGSSN*RLTEGS
Trigger: CGAGCCCTCTGTAAGTCGGCAATTGCTAGAACCGGA...ACTATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR GCA 90 bp GGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATCAGTTTGGAGACCCATaGATCAAACCAGTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: GFQLTQKPHIAIRNIIVHQFGDP*IKPVLG
Trigger: TCCCAGGACTGGTTTGATGCATGGGTCTCCAAACTG...ATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR GCA 90 bp AGGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCACATGGTAAAGGGGACTaGCACGGAAAGCTGTTTGGT +
Preference number: 4 (lower is better)
Translates to: RFSVDPETTHSYKKHNCAHGKGD*HGKLFG
Trigger: ACCAAACAGCTTTCCGTGGCAGTCCCCTTTACCATG...TGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR GCA 90 bp ATCCCAAAGTGGTTAGGGGCCTTGTCTAATGCACTTCTGAAAGTCCATTATAAAATGTGCAAGATCTTCTaGACACCTGTCCATCTCTTC +
Preference number: 4 (lower is better)
Translates to: IPKWLGALSNALLKVHYKMCKIF*TPVHLF
Trigger: GAAGAGATGGACAGGTGTGCAGAAGATCTTGCACAT...TTTATAATGGACTTTCAGAAGTGCATTAGACAAGGCCCCTAACCACTTTGGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR GCA 90 bp ATCCCAAAGTGGTTAGGGGCCTTGTCTAATGCACTTCTGAAAGTCCATTATAAAGTCAGTAAAGTTAGGTaGCGACTGAGTTCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: IPKWLGALSNALLKVHYKVSKVR*RLSSLK
Trigger: CTTCAGAGAACTCAGTCGGCACCTAACTTTACTGAC...TTTATAATGGACTTTCAGAAGTGCATTAGACAAGGCCCCTAACCACTTTGGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR GCA 90 bp AGGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCAAGACTGACATGGATTTaGTCACCAGCCTCATCAGGG +
Preference number: 4 (lower is better)
Translates to: RFSVDPETTHSYKKHNCARLTWI*SPASSG
Trigger: CCCTGATGAGGCTGGTGAGCAAATCCATGTCAGTCT...TGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000190611.9
ENST00000392505.6
ENST00000409045.7
CDS-3UTR GCA 90 bp AACTCAGATGCAAGGGAGGAGTTTTGGATAAATAAAATATTGCGCCATCTAGTGCTCTCATTGGCTACTTaGTGTGATAAGGGGAGACTG +
Preference number: 4 (lower is better)
Translates to: NSDAREEFWINKILRHLVLSLAT*CDKGRL
Trigger: CAGTCTCCCCTTATCACAGCAAGTAGCCAATGAGAG...CACTAGATGGCGCAATATTTTATTTATCCAAAACTCCTCCCTTGCATCTGAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR GCA 90 bp ATCCCAAAGTGGTTAGGGGCCTTGTCTAATGCACTTCTGAAAGTCCATTATAAAGAATGGCTTACTTCCTaGTCTGAAATAGGTGGAGCA +
Preference number: 4 (lower is better)
Translates to: IPKWLGALSNALLKVHYKEWLTS*SEIGGA
Trigger: TGCTCCACCTATTTCAGAGCAGGAAGTAAGCCATTC...TTTATAATGGACTTTCAGAAGTGCATTAGACAAGGCCCCTAACCACTTTGGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR GCA 90 bp TTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGTAACCTGGTCTCCAAATaGACTTTGCAGAGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: FQLTQKPHIAIRNIIVHSNLVSK*TLQRGP
Trigger: TGGCCCCCTCTGCAAAGTGCATTTGGAGACCAGGTT...ACTATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR GCA 90 bp GGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATGACACACTTGAAGTCTaGACTGACCGACTGCTTGTG +
Preference number: 4 (lower is better)
Translates to: GFQLTQKPHIAIRNIIVHDTLEV*TDRLLV
Trigger: CACAAGCAGTCGGTCAGTGCAGACTTCAAGTGTGTC...ATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR GCA 90 bp TTAGCCATTATTAGGAATGCTTTGCTGAGGAGAAATACCACTAAAATCAACACCGACACACTTGAAGTCTaGACTGACCGACTGCTTGTG +
Preference number: 4 (lower is better)
Translates to: LAIIRNALLRRNTTKINTDTLEV*TDRLLV
Trigger: CACAAGCAGTCGGTCAGTGCAGACTTCAAGTGTGTC...GGTGTTGATTTTAGTGGTATTTCTCCTCAGCAAAGCATTCCTAATAATGGCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR GCA 90 bp AATATTCCTCTCTCTACAATTGCCCTCACTTCTATTTGGGAGGAAGGAATGGCTACACTTCTGCTTTCCTaGTTTGGGATGGATACATTC +
Preference number: 4 (lower is better)
Translates to: NIPLSTIALTSIWEEGMATLLLS*FGMDTF
Trigger: GAATGTATCCATCCCAAAGCAGGAAAGCAGAAGTGT...AGCCATTCCTTCCTCCCAAATAGAAGTGAGGGCAATTGTAGAGAGAGGAATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR GCA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCCTGATGCAAGTTTTCTaGAAAAGCCTCTGTATATTA +
Preference number: 4 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVLMQVF*KSLCIL
Trigger: TAATATACAGAGGCTTTTGCAGAAAACTTGCATCAG...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR GCA 90 bp ATATACTGGGCCAAGTGCAAACATTTATTACATCCCCTGGTGTGTGCAGAGCTCATTGTTGAAGCAGAATaGTTAGATCTGGTGATGGAT +
Preference number: 4 (lower is better)
Translates to: IYWAKCKHLLHPLVCAELIVEAE*LDLVMD
Trigger: ATCCATCACCAGATCTAAGCATTCTGCTTCAACAAT...GAGCTCTGCACACACCAGGGGATGTAATAAATGTTTGCACTTGGCCCAGTATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR GCA 90 bp GGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATCTGATGGTCAGCTGCTaGTCCCTTTCCTTCATCTCT +
Preference number: 4 (lower is better)
Translates to: GFQLTQKPHIAIRNIIVHLMVSC*SLSFIS
Trigger: AGAGATGAAGGAAAGGGAGCAGCAGCTGACCATCAG...ATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR GCA 90 bp AGGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCACATCTGATGGTCAGCTaGTGCTCCCTTTCCTTCATC +
Preference number: 4 (lower is better)
Translates to: RFSVDPETTHSYKKHNCAHLMVS*CSLSFI
Trigger: GATGAAGGAAAGGGAGCAGCAGCTGACCATCAGATG...TGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR GCA 90 bp TTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGTGCTAAGTACAGTCGTTaGTTCCCTGATGGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: FQLTQKPHIAIRNIIVHSAKYSR*FPDGSW
Trigger: CCAGGACCCATCAGGGAAGCAACGACTGTACTTAGC...ACTATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR GCA 90 bp TTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGTGTCAGCCTCTACCAGTaGTGGTGTGTGCCATTGATC +
Preference number: 4 (lower is better)
Translates to: FQLTQKPHIAIRNIIVHSVSLYQ*WCVPLI
Trigger: GATCAATGGCACACACCAGCACTGGTAGAGGCTGAC...ACTATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR GCA 90 bp ATATACTGGGCCAAGTGCAAACATTTATTACATCCCCTGGTGTGTGCAGAGCTCATATACTGGGCCAAGTaGAAACATTTATTACATCCC +
Preference number: 4 (lower is better)
Translates to: IYWAKCKHLLHPLVCAELIYWAK*KHLLHP
Trigger: GGGATGTAATAAATGTTTGCACTTGGCCCAGTATAT...GAGCTCTGCACACACCAGGGGATGTAATAAATGTTTGCACTTGGCCCAGTATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CCA 90 bp GGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATCTTGCTGGGGCTATCTaGGTAAATTATAGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: GFQLTQKPHIAIRNIIVHLAGAI*VNYRGG
Trigger: GCCACCCCTATAATTTACCCAGATAGCCCCAGCAAG...ATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CCA 90 bp TGGACGCAGGACAGGAAATTAACGAGCCACGTAAATACAGAGATCTACTTAGCATCCAAGTCAGCTTTATaGTCAAAGCTGTTTCACAGT +
Preference number: 4 (lower is better)
Translates to: WTQDRKLTSHVNTEIYLASKSAL*SKLFHS
Trigger: ACTGTGAAACAGCTTTGACCATAAAGCTGACTTGGA...TGCTAAGTAGATCTCTGTATTTACGTGGCTCGTTAATTTCCTGTCCTGCGTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CCA 90 bp AGCATCACATCTTTTTCGACAAGGCCAGCACAATCACACCACATCAAACAGACATCCAAGTCAGCTTTATaGTCAAAGCTGTTTCACAGT +
Preference number: 4 (lower is better)
Translates to: SITSFSTRPAQSHHIKQTSKSAL*SKLFHS
Trigger: ACTGTGAAACAGCTTTGACCATAAAGCTGACTTGGA...TGTCTGTTTGATGTGGTGTGATTGTGCTGGCCTTGTCGAAAAAGATGTGATGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CCA 90 bp ATCAAAATATCATTTCAAGAGCAGTCATTCTGGATACCGACGGCTTTGTCAGTGAACCACCTTGCACCTTaGAGTCAAAGTCTTCCAAGT +
Preference number: 4 (lower is better)
Translates to: IKISFQEQSFWIPTALSVNHLAP*SQSLPS
Trigger: ACTTGGAAGACTTTGACTCCAAGGTGCAAGGTGGTT...CACTGACAAAGCCGTCGGTATCCAGAATGACTGCTCTTGAAATGATATTTTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR CCA 90 bp ATCCCAAAGTGGTTAGGGGCCTTGTCTAATGCACTTCTGAAAGTCCATTATAAAGAGGAGGCACTTCTATaGGTTGGAGTGGATGTTTTA +
Preference number: 4 (lower is better)
Translates to: IPKWLGALSNALLKVHYKEEALL*VGVDVL
Trigger: TAAAACATCCACTCCAACCCATAGAAGTGCCTCCTC...TTTATAATGGACTTTCAGAAGTGCATTAGACAAGGCCCCTAACCACTTTGGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CCA 90 bp GGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATTGCCTACTGTCCCTTTaGGAGGATGTTGAAGAGGAG +
Preference number: 4 (lower is better)
Translates to: GFQLTQKPHIAIRNIIVHCLLSL*EDVEEE
Trigger: CTCCTCTTCAACATCCTCCCAAAGGGACAGTAGGCA...ATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CCA 90 bp ATCCCAAAGTGGTTAGGGGCCTTGTCTAATGCACTTCTGAAAGTCCATTATAAACTGGTTTCTGGACATTaGTTTGGCCTATTTTCAGCC +
Preference number: 4 (lower is better)
Translates to: IPKWLGALSNALLKVHYKLVSGH*FGLFSA
Trigger: GGCTGAAAATAGGCCAAACCAATGTCCAGAAACCAG...TTTATAATGGACTTTCAGAAGTGCATTAGACAAGGCCCCTAACCACTTTGGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CCA 90 bp ATCCCAAAGTGGTTAGGGGCCTTGTCTAATGCACTTCTGAAAGTCCATTATAAACCACGGAAAGCTGTTTaGTTGCATCTTTCCATCCAT +
Preference number: 4 (lower is better)
Translates to: IPKWLGALSNALLKVHYKPRKAV*LHLSIH
Trigger: ATGGATGGAAAGATGCAACCAAACAGCTTTCCGTGG...TTTATAATGGACTTTCAGAAGTGCATTAGACAAGGCCCCTAACCACTTTGGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CCA 90 bp TTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGTGCTGCCACTTTACTCTaGCCAGTTGTGCACGTTGCA +
Preference number: 4 (lower is better)
Translates to: FQLTQKPHIAIRNIIVHSAATLL*PVVHVA
Trigger: TGCAACGTGCACAACTGGCCAGAGTAAAGTGGCAGC...ACTATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CCA 90 bp AGGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCACACAAAGGTTGGGGTTaGAGGAATGCAAGCGAACTG +
Preference number: 4 (lower is better)
Translates to: RFSVDPETTHSYKKHNCAHKGWG*RNASEL
Trigger: CAGTTCGCTTGCATTCCTCCAACCCCAACCTTTGTG...TGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CCA 90 bp GGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATCACAAAGGTTGGGGTTaGAGGAATGCAAGCGAACTG +
Preference number: 4 (lower is better)
Translates to: GFQLTQKPHIAIRNIIVHHKGWG*RNASEL
Trigger: CAGTTCGCTTGCATTCCTCCAACCCCAACCTTTGTG...ATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CCA 90 bp AGGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCAAAGGGGAGACTGACATaGATTTGCTCACCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: RFSVDPETTHSYKKHNCAKGRLT*ICSPAS
Trigger: TGAGGCTGGTGAGCAAATCCATGTCAGTCTCCCCTT...TGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000190611.9
ENST00000392505.6
ENST00000409045.7
CDS-3UTR CCA 90 bp GGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAAGGGGAGACTGACATaGATTTGCTCACCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: GFQLTQKPHIAIRNIIVHKGRLT*ICSPAS
Trigger: TGAGGCTGGTGAGCAAATCCATGTCAGTCTCCCCTT...ATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000190611.9
ENST00000392505.6
ENST00000409045.7
CDS-3UTR CCA 90 bp AGGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCAAGAGGCGGCTCTCATTaGCTACTTGCTGTGATAAGG +
Preference number: 4 (lower is better)
Translates to: RFSVDPETTHSYKKHNCARGGSH*LLAVIR
Trigger: CCTTATCACAGCAAGTAGCCAATGAGAGCCGCCTCT...TGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CCA 90 bp GGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAAACAGACTCTGACATaGAGAGGCGGCTCTCATTGG +
Preference number: 4 (lower is better)
Translates to: GFQLTQKPHIAIRNIIVHKQTLT*RGGSHW
Trigger: CCAATGAGAGCCGCCTCTCCATGTCAGAGTCTGTTT...ATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CCA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCTATTGTCTGCAACACTaGTGTTGTCTTCAGATATAT +
Preference number: 4 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVYCLQH*CCLQIY
Trigger: ATATATCTGAAGACAACACCAGTGTTGCAGACAATA...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CCA 90 bp ATCAAAATATCATTTCAAGAGCAGTCATTCTGGATACCGACGGCTTTGTCAGTGCATAGTTTGTTGGCATaGAACCTGGTCTCCAAATGC +
Preference number: 4 (lower is better)
Translates to: IKISFQEQSFWIPTALSVHSLLA*NLVSKC
Trigger: GCATTTGGAGACCAGGTTCCATGCCAACAAACTATG...CACTGACAAAGCCGTCGGTATCCAGAATGACTGCTCTTGAAATGATATTTTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR CCA 90 bp AGGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCACAAAAATCTTTGATCTaGCCGGAACCGGGCGTCTGT +
Preference number: 4 (lower is better)
Translates to: RFSVDPETTHSYKKHNCAQKSLI*PEPGVC
Trigger: ACAGACGCCCGGTTCCGGCCAGATCAAAGATTTTTG...TGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CCA 90 bp GGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATCGTCTCCGAGATCTCTaGAGTTCCTCTACTCTTTGC +
Preference number: 4 (lower is better)
Translates to: GFQLTQKPHIAIRNIIVHRLRDL*SSSTLC
Trigger: GCAAAGAGTAGAGGAACTCCAGAGATCTCGGAGACG...ATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CCA 90 bp AGGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCACGTCTCCGAGATCTCTaGAGTTCCTCTACTCTTTGC +
Preference number: 4 (lower is better)
Translates to: RFSVDPETTHSYKKHNCARLRDL*SSSTLC
Trigger: GCAAAGAGTAGAGGAACTCCAGAGATCTCGGAGACG...TGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CCA 90 bp ATCCCAAAGTGGTTAGGGGCCTTGTCTAATGCACTTCTGAAAGTCCATTATAAAGAAAGGATCCCAAAGTaGTTAGGGGCCTTGTCTAAT +
Preference number: 4 (lower is better)
Translates to: IPKWLGALSNALLKVHYKERIPK*LGALSN
Trigger: ATTAGACAAGGCCCCTAACCACTTTGGGATCCTTTC...TTTATAATGGACTTTCAGAAGTGCATTAGACAAGGCCCCTAACCACTTTGGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CCA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCAAACTGGTCAGACTTTaGATTTTATATTCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVKLVRL*ILYSAP
Trigger: AGGAGCAGAATATAAAATCCAAAGTCTGACCAGTTT...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CCA 90 bp TGGACGCAGGACAGGAAATTAACGAGCCACGTAAATACAGAGATCTACTTAGCAGGATGGTTTATTATCTaGACGCAGGACAGGAAATTA +
Preference number: 4 (lower is better)
Translates to: WTQDRKLTSHVNTEIYLAGWFII*TQDRKL
Trigger: TAATTTCCTGTCCTGCGTCCAGATAATAAACCATCC...TGCTAAGTAGATCTCTGTATTTACGTGGCTCGTTAATTTCCTGTCCTGCGTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CCA 90 bp GGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATGAATCGATGAGCTTCTaGTCAGCCTCTACCAGTGCT +
Preference number: 4 (lower is better)
Translates to: GFQLTQKPHIAIRNIIVHESMSF*SASTSA
Trigger: AGCACTGGTAGAGGCTGACCAGAAGCTCATCGATTC...ATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CCA 90 bp ATCCCAAAGTGGTTAGGGGCCTTGTCTAATGCACTTCTGAAAGTCCATTATAAAAGTAAATCTGCACCCTaGGTGACAGCATATGGAATC +
Preference number: 4 (lower is better)
Translates to: IPKWLGALSNALLKVHYKSKSAP*VTAYGI
Trigger: GATTCCATATGCTGTCACCCAGGGTGCAGATTTACT...TTTATAATGGACTTTCAGAAGTGCATTAGACAAGGCCCCTAACCACTTTGGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CCA 90 bp ATATACTGGGCCAAGTGCAAACATTTATTACATCCCCTGGTGTGTGCAGAGCTCATTTGCTTAAGATGTTaGACATGTTGGTCCATCACA +
Preference number: 4 (lower is better)
Translates to: IYWAKCKHLLHPLVCAELICLRC*TCWSIT
Trigger: TGTGATGGACCAACATGTCCAACATCTTAAGCAAAT...GAGCTCTGCACACACCAGGGGATGTAATAAATGTTTGCACTTGGCCCAGTATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR CCA 90 bp TGGACGCAGGACAGGAAATTAACGAGCCACGTAAATACAGAGATCTACTTAGCAAACTTTGTTTCCAGATaGGGAGAGAGGATATTAGCA +
Preference number: 4 (lower is better)
Translates to: WTQDRKLTSHVNTEIYLANFVSR*GERILA
Trigger: TGCTAATATCCTCTCTCCCCATCTGGAAACAAAGTT...TGCTAAGTAGATCTCTGTATTTACGTGGCTCGTTAATTTCCTGTCCTGCGTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR CCA 90 bp AGGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCAAAGCCTAAGAGAGAATaGAAGGTGAGGTGGGGGTAC +
Preference number: 4 (lower is better)
Translates to: RFSVDPETTHSYKKHNCAKPKRE*KVRWGY
Trigger: GTACCCCCACCTCACCTTCCATTCTCTCTTAGGCTT...TGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR TCA 90 bp AGGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCAGACATGATATGTCTTTaGCCTTGCTGGGGCTATCTG +
Preference number: 4 (lower is better)
Translates to: RFSVDPETTHSYKKHNCADMICL*PCWGYL
Trigger: CAGATAGCCCCAGCAAGGTCAAAGACATATCATGTC...TGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR TCA 90 bp TTAGCCATTATTAGGAATGCTTTGCTGAGGAGAAATACCACTAAAATCAACACCAAGAGCAGGCAATATTaGGGGTGTCCAAACCACCTT +
Preference number: 4 (lower is better)
Translates to: LAIIRNALLRRNTTKINTKSRQY*GCPNHL
Trigger: AAGGTGGTTTGGACACCCTCAATATTGCCTGCTCTT...GGTGTTGATTTTAGTGGTATTTCTCCTCAGCAAAGCATTCCTAATAATGGCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR TCA 90 bp AGGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCAAAGAGCAGGCAATATTaGGGGTGTCCAAACCACCTT +
Preference number: 4 (lower is better)
Translates to: RFSVDPETTHSYKKHNCAKSRQY*GCPNHL
Trigger: AAGGTGGTTTGGACACCCTCAATATTGCCTGCTCTT...TGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR TCA 90 bp GGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAAGAGCAGGCAATATTaGGGGTGTCCAAACCACCTT +
Preference number: 4 (lower is better)
Translates to: GFQLTQKPHIAIRNIIVHKSRQY*GCPNHL
Trigger: AAGGTGGTTTGGACACCCTCAATATTGCCTGCTCTT...ATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR TCA 90 bp TTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGTGGAGTGGATGTTTTATaGGCAGGGGAAATGCCCTTC +
Preference number: 4 (lower is better)
Translates to: FQLTQKPHIAIRNIIVHSGVDVL*AGEMPF
Trigger: GAAGGGCATTTCCCCTGCTCATAAAACATCCACTCC...ACTATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR TCA 90 bp TCTGAGAAGCATCACATCTTTTTCGACAAGGCCAGCACAATCACACCACATCAAGTTGAAGGAAATATGTaGAAACTAGCATCTCTTGGT +
Preference number: 4 (lower is better)
Translates to: SEKHHIFFDKASTITPHQVEGNM*KLASLG
Trigger: ACCAAGAGATGCTAGTTTTCACATATTTCCTTCAAC...TTGATGTGGTGTGATTGTGCTGGCCTTGTCGAAAAAGATGTGATGCTTCTCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR TCA 90 bp TTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGTAACATTAGCAGCTGGTaGGGATTCAGCTGTGGACGT +
Preference number: 4 (lower is better)
Translates to: FQLTQKPHIAIRNIIVHSNISSW*GFSCGR
Trigger: ACGTCCACAGCTGAATCCTCACCAGCTGCTAATGTT...ACTATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR TCA 90 bp TTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGTGTTCAGCATTCTGGTTaGGTGCCTGAGACAGTGACT +
Preference number: 4 (lower is better)
Translates to: FQLTQKPHIAIRNIIVHSVQHSG*VPETVT
Trigger: AGTCACTGTCTCAGGCACTCAACCAGAATGCTGAAC...ACTATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000190611.9
ENST00000392505.6
ENST00000409045.7
CDS-3UTR TCA 90 bp TTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGTGTGATAAGGGGAGACTaGCATGGATTTGCTCACCAG +
Preference number: 4 (lower is better)
Translates to: FQLTQKPHIAIRNIIVHSVIRGD*HGFAHQ
Trigger: CTGGTGAGCAAATCCATGTCAGTCTCCCCTTATCAC...ACTATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR TCA 90 bp TTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGTGCAGAAATGGGTGGATaGTGGCTAACCTGTTCTGAG +
Preference number: 4 (lower is better)
Translates to: FQLTQKPHIAIRNIIVHSAEMGG*WLTCSE
Trigger: CTCAGAACAGGTTAGCCATCATCCACCCATTTCTGC...ACTATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR TCA 90 bp TCTGAGAAGCATCACATCTTTTTCGACAAGGCCAGCACAATCACACCACATCAAAAACACAAAATTCTTTaGTTCACAGTGACAGGCAGA +
Preference number: 4 (lower is better)
Translates to: SEKHHIFFDKASTITPHQKHKIL*FTVTGR
Trigger: TCTGCCTGTCACTGTGAATCAAAGAATTTTGTGTTT...TTGATGTGGTGTGATTGTGCTGGCCTTGTCGAAAAAGATGTGATGCTTCTCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR TCA 90 bp ATCCCAAAGTGGTTAGGGGCCTTGTCTAATGCACTTCTGAAAGTCCATTATAAACATACTTTGGAAGCATaGCATTCAGTGTTCCAACAG +
Preference number: 4 (lower is better)
Translates to: IPKWLGALSNALLKVHYKHTLEA*HSVFQQ
Trigger: CTGTTGGAACACTGAATGTCATGCTTCCAAAGTATG...TTTATAATGGACTTTCAGAAGTGCATTAGACAAGGCCCCTAACCACTTTGGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR TCA 90 bp AGGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATCCATCTTCTCCCACTaGGGATGTTGTGTATGCAAG +
Preference number: 4 (lower is better)
Translates to: RFSVDPETTHSYKKHNCASIFSH*GCCVCK
Trigger: CTTGCATACACAACATCCTCAGTGGGAGAAGATGGA...TGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR TCA 90 bp TCTGAGAAGCATCACATCTTTTTCGACAAGGCCAGCACAATCACACCACATCAAATACCATATGGTAACTaGCTTATCAGAGTAAAGCAC +
Preference number: 4 (lower is better)
Translates to: SEKHHIFFDKASTITPHQIPYGN*LIRVKH
Trigger: GTGCTTTACTCTGATAAGTCAGTTACCATATGGTAT...TTGATGTGGTGTGATTGTGCTGGCCTTGTCGAAAAAGATGTGATGCTTCTCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR TCA 90 bp TGGACGCAGGACAGGAAATTAACGAGCCACGTAAATACAGAGATCTACTTAGCAATACCATATGGTAACTaGCTTATCAGAGTAAAGCAC +
Preference number: 4 (lower is better)
Translates to: WTQDRKLTSHVNTEIYLAIPYGN*LIRVKH
Trigger: GTGCTTTACTCTGATAAGTCAGTTACCATATGGTAT...TGCTAAGTAGATCTCTGTATTTACGTGGCTCGTTAATTTCCTGTCCTGCGTCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR TCA 90 bp TCTGAGAAGCATCACATCTTTTTCGACAAGGCCAGCACAATCACACCACATCAATTAGGAATGCTTTGCTaGGGAGAAATACCACTAAAA +
Preference number: 4 (lower is better)
Translates to: SEKHHIFFDKASTITPHQLGMLC*GEIPLK
Trigger: TTTTAGTGGTATTTCTCCTCAGCAAAGCATTCCTAA...TTGATGTGGTGTGATTGTGCTGGCCTTGTCGAAAAAGATGTGATGCTTCTCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR TCA 90 bp ATCCCAAAGTGGTTAGGGGCCTTGTCTAATGCACTTCTGAAAGTCCATTATAAAATGTTTAGGCTATTTTaGGACTGTTCAGGGAAGTGC +
Preference number: 4 (lower is better)
Translates to: IPKWLGALSNALLKVHYKMFRLF*DCSGKC
Trigger: GCACTTCCCTGAACAGTCTCAAAATAGCCTAAACAT...TTTATAATGGACTTTCAGAAGTGCATTAGACAAGGCCCCTAACCACTTTGGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR TCA 90 bp ATTATCTGGACGCAGGACAGGAAATTAACGAGCCACGTAAATACAGAGATCTACAATGACCATCTCCAATaGGATGAAGCAGCTTATGAA +
Preference number: 4 (lower is better)
Translates to: IIWTQDRKLTSHVNTEIYNDHLQ*DEAAYE
Trigger: TTCATAAGCTGCTTCATCTCATTGGAGATGGTCATT...GTAGATCTCTGTATTTACGTGGCTCGTTAATTTCCTGTCCTGCGTCCAGATAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR TCA 90 bp TTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGTGCTTTAAAAAGAACTTaGGTCCAGGCGCGGTTGCTC +
Preference number: 4 (lower is better)
Translates to: FQLTQKPHIAIRNIIVHSALKRT*VQARLL
Trigger: GAGCAACCGCGCCTGGACTCAAGTTCTTTTTAAAGC...ACTATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR TCA 90 bp ATCCCAAAGTGGTTAGGGGCCTTGTCTAATGCACTTCTGAAAGTCCATTATAAATGTTTCAAATGTTTGTaGCACAAAAGTGGGGTTGGG +
Preference number: 4 (lower is better)
Translates to: IPKWLGALSNALLKVHYKCFKCL*HKSGVG
Trigger: CCCAACCCCACTTTTGTGTCACAAACATTTGAAACA...TTTATAATGGACTTTCAGAAGTGCATTAGACAAGGCCCCTAACCACTTTGGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR GCA 90 bp GGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATGTGTCCAAACCACCTTaGACCTTGGAGTCAAAGTCT +
Preference number: 4 (lower is better)
Translates to: GFQLTQKPHIAIRNIIVHVSKPP*TLESKS
Trigger: AGACTTTGACTCCAAGGTGCAAGGTGGTTTGGACAC...ATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR GCA 90 bp AGGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCAGTGTCCAAACCACCTTaGACCTTGGAGTCAAAGTCT +
Preference number: 4 (lower is better)
Translates to: RFSVDPETTHSYKKHNCAVSKPP*TLESKS
Trigger: AGACTTTGACTCCAAGGTGCAAGGTGGTTTGGACAC...TGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR GCA 90 bp TTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGTCATGGTAAAGGGGACTaGCACGGAAAGCTGTTTGGT +
Preference number: 4 (lower is better)
Translates to: FQLTQKPHIAIRNIIVHSHGKGD*HGKLFG
Trigger: ACCAAACAGCTTTCCGTGGCAGTCCCCTTTACCATG...ACTATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR GCA 90 bp AATATTCCTCTCTCTACAATTGCCCTCACTTCTATTTGGGAGGAAGGAATGGCTCTGAAATTCAATATCTaGACAAAGGTTGGGGTTGGA +
Preference number: 4 (lower is better)
Translates to: NIPLSTIALTSIWEEGMALKFNI*TKVGVG
Trigger: TCCAACCCCAACCTTTGTGCAGATATTGAATTTCAG...AGCCATTCCTTCCTCCCAAATAGAAGTGAGGGCAATTGTAGAGAGAGGAATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR GCA 90 bp GGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATCTCTCATTGGCTACTTaGTGTGATAAGGGGAGACTG +
Preference number: 4 (lower is better)
Translates to: GFQLTQKPHIAIRNIIVHLSLAT*CDKGRL
Trigger: CAGTCTCCCCTTATCACAGCAAGTAGCCAATGAGAG...ATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR GCA 90 bp ATCCCAAAGTGGTTAGGGGCCTTGTCTAATGCACTTCTGAAAGTCCATTATAAACCGAGAAATATTGTCTaGAACACTGGTGTTGTCTTC +
Preference number: 4 (lower is better)
Translates to: IPKWLGALSNALLKVHYKPRNIV*NTGVVF
Trigger: GAAGACAACACCAGTGTTGCAGACAATATTTCTCGG...TTTATAATGGACTTTCAGAAGTGCATTAGACAAGGCCCCTAACCACTTTGGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR GCA 90 bp AGCATCACATCTTTTTCGACAAGGCCAGCACAATCACACCACATCAAACAGACAATATACTGGGCCAAGTaGAAACATTTATTACATCCC +
Preference number: 4 (lower is better)
Translates to: SITSFSTRPAQSHHIKQTIYWAK*KHLLHP
Trigger: GGGATGTAATAAATGTTTGCACTTGGCCCAGTATAT...TGTCTGTTTGATGTGGTGTGATTGTGCTGGCCTTGTCGAAAAAGATGTGATGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR GCA 90 bp TTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGTTGGGATCCAACCATATaGCCCCAAGAAGCAAGATCC +
Preference number: 4 (lower is better)
Translates to: FQLTQKPHIAIRNIIVHSWDPTI*PQEARS
Trigger: GGATCTTGCTTCTTGGGGGCATATGGTTGGATCCCA...ACTATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR CCA 90 bp AACTCAGATGCAAGGGAGGAGTTTTGGATAAATAAAATATTGCGCCATCTAGTGGGCACTTCTATGGGTTaGAGTGGATGTTTTATGAGC +
Preference number: 4 (lower is better)
Translates to: NSDAREEFWINKILRHLVGTSMG*SGCFMS
Trigger: GCTCATAAAACATCCACTCCAACCCATAGAAGTGCC...CACTAGATGGCGCAATATTTTATTTATCCAAAACTCCTCCCTTGCATCTGAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CCA 90 bp TTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGTTGCCTACTGTCCCTTTaGGAGGATGTTGAAGAGGAG +
Preference number: 4 (lower is better)
Translates to: FQLTQKPHIAIRNIIVHSCLLSL*EDVEEE
Trigger: CTCCTCTTCAACATCCTCCCAAAGGGACAGTAGGCA...ACTATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CCA 90 bp AACTCAGATGCAAGGGAGGAGTTTTGGATAAATAAAATATTGCGCCATCTAGTGCTGGTTTCTGGACATTaGTTTGGCCTATTTTCAGCC +
Preference number: 4 (lower is better)
Translates to: NSDAREEFWINKILRHLVLVSGH*FGLFSA
Trigger: GGCTGAAAATAGGCCAAACCAATGTCCAGAAACCAG...CACTAGATGGCGCAATATTTTATTTATCCAAAACTCCTCCCTTGCATCTGAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CCA 90 bp ATCCCAAAGTGGTTAGGGGCCTTGTCTAATGCACTTCTGAAAGTCCATTATAAATCCACAAGGTTTGACTaGCAATGTGCAAGATCTTCT +
Preference number: 4 (lower is better)
Translates to: IPKWLGALSNALLKVHYKSTRFD*QCARSS
Trigger: AGAAGATCTTGCACATTGCCAGTCAAACCTTGTGGA...TTTATAATGGACTTTCAGAAGTGCATTAGACAAGGCCCCTAACCACTTTGGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CCA 90 bp TTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGTAAACAGACTCTGACATaGAGAGGCGGCTCTCATTGG +
Preference number: 4 (lower is better)
Translates to: FQLTQKPHIAIRNIIVHSKQTLT*RGGSHW
Trigger: CCAATGAGAGCCGCCTCTCCATGTCAGAGTCTGTTT...ACTATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CCA 90 bp ATCCCAAAGTGGTTAGGGGCCTTGTCTAATGCACTTCTGAAAGTCCATTATAAATCTATCACCACCCCCTaGACTTCATTCATGTTAGAA +
Preference number: 4 (lower is better)
Translates to: IPKWLGALSNALLKVHYKSITTP*TSFMLE
Trigger: TTCTAACATGAATGAAGTCCAGGGGGTGGTGATAGA...TTTATAATGGACTTTCAGAAGTGCATTAGACAAGGCCCCTAACCACTTTGGGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CCA 90 bp GGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATTGTTGGCATGGAACCTaGTCTCCAAATGCACTTTGC +
Preference number: 4 (lower is better)
Translates to: GFQLTQKPHIAIRNIIVHCWHGT*SPNALC
Trigger: GCAAAGTGCATTTGGAGACCAGGTTCCATGCCAACA...ATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CCA 90 bp AGGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATGTTGGCATGGAACCTaGTCTCCAAATGCACTTTGC +
Preference number: 4 (lower is better)
Translates to: RFSVDPETTHSYKKHNCACWHGT*SPNALC
Trigger: GCAAAGTGCATTTGGAGACCAGGTTCCATGCCAACA...TGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CCA 90 bp ATCCCAAAGTGGTTAGGGGCCTTGTCTAATGCACTTCTGAAAGTCCATTATAAACACTGTGAGGTTAGGTaGAAGAGGGATGGTTTATTA +
Preference number: 4 (lower is better)
Translates to: IPKWLGALSNALLKVHYKHCEVR*KRDGLL
Trigger: TAATAAACCATCCCTCTTCCACCTAACCTCACAGTG...TTTATAATGGACTTTCAGAAGTGCATTAGACAAGGCCCCTAACCACTTTGGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CCA 90 bp AGGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCACAAGAGCAGTCATTCTaGATACCGACGGCTTTGTCA +
Preference number: 4 (lower is better)
Translates to: RFSVDPETTHSYKKHNCAQEQSF*IPTALS
Trigger: TGACAAAGCCGTCGGTATCCAGAATGACTGCTCTTG...TGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR CCA 90 bp GTATTATTTTCAGGGAAGAAGCTGACCTGGATCAAGAATGTCCTGCTAGACCTTAGCATTCTTGAGCACTaGGTGTTTCAAATGTTTGTG +
Preference number: 4 (lower is better)
Translates to: VLFSGKKLTWIKNVLLDLSILEH*VFQMFV
Trigger: CACAAACATTTGAAACACCCAGTGCTCAAGAATGCT...AAGGTCTAGCAGGACATTCTTGATCCAGGTCAGCTTCTTCCCTGAAAATAATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR CCA 90 bp GTATTATTTTCAGGGAAGAAGCTGACCTGGATCAAGAATGTCCTGCTAGACCTTGAAAGAGTATTTAGCTaGCACACTCTCACCTTAGTT +
Preference number: 4 (lower is better)
Translates to: VLFSGKKLTWIKNVLLDLERVFS*HTLTLV
Trigger: AACTAAGGTGAGAGTGTGCCAGCTAAATACTCTTTC...AAGGTCTAGCAGGACATTCTTGATCCAGGTCAGCTTCTTCCCTGAAAATAATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR CCA 90 bp AATATTCCTCTCTCTACAATTGCCCTCACTTCTATTTGGGAGGAAGGAATGGCTAAACTTCTGGTTATCTaGCTGGTTAGATTGCCTCTA +
Preference number: 4 (lower is better)
Translates to: NIPLSTIALTSIWEEGMAKLLVI*LVRLPL
Trigger: TAGAGGCAATCTAACCAGCCAGATAACCAGAAGTTT...AGCCATTCCTTCCTCCCAAATAGAAGTGAGGGCAATTGTAGAGAGAGGAATATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR TCA 90 bp TTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGTGACATGATATGTCTTTaGCCTTGCTGGGGCTATCTG +
Preference number: 4 (lower is better)
Translates to: FQLTQKPHIAIRNIIVHSDMICL*PCWGYL
Trigger: CAGATAGCCCCAGCAAGGTCAAAGACATATCATGTC...ACTATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR TCA 90 bp ATCCCAAAGTGGTTAGGGGCCTTGTCTAATGCACTTCTGAAAGTCCATTATAAATTCATGAATCAGGTTTaGCTAGAAAAGAGCAGGCAA +
Preference number: 4 (lower is better)
Translates to: IPKWLGALSNALLKVHYKFMNQV*LEKSRQ
Trigger: TTGCCTGCTCTTTTCTAGTCAAACCTGATTCATGAA...TTTATAATGGACTTTCAGAAGTGCATTAGACAAGGCCCCTAACCACTTTGGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR TCA 90 bp TTAGCCATTATTAGGAATGCTTTGCTGAGGAGAAATACCACTAAAATCAACACCAAGTTCCACAAGGTTTaGCTGGCAATGTGCAAGATC +
Preference number: 4 (lower is better)
Translates to: LAIIRNALLRRNTTKINTKFHKV*LAMCKI
Trigger: GATCTTGCACATTGCCAGTCAAACCTTGTGGAACTT...GGTGTTGATTTTAGTGGTATTTCTCCTCAGCAAAGCATTCCTAATAATGGCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR TCA 90 bp AGGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCAAAGTTCCACAAGGTTTaGCTGGCAATGTGCAAGATC +
Preference number: 4 (lower is better)
Translates to: RFSVDPETTHSYKKHNCAKFHKV*LAMCKI
Trigger: GATCTTGCACATTGCCAGTCAAACCTTGTGGAACTT...TGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR TCA 90 bp TTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGTTTCTCCATCGTCTTGTaGCCCGCTTGTCTTTCTTTG +
Preference number: 4 (lower is better)
Translates to: FQLTQKPHIAIRNIIVHSFSIVL*PACLSL
Trigger: CAAAGAAAGACAAGCGGGTCACAAGACGATGGAGAA...ACTATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409631.5
CDS-3UTR TCA 90 bp GGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATTGGCTAGGGGGAGTCTaGAATTCAATATCTGCACAA +
Preference number: 4 (lower is better)
Translates to: GFQLTQKPHIAIRNIIVHWLGGV*NSISAQ
Trigger: TTGTGCAGATATTGAATTTCAGACTCCCCCTAGCCA...ATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR TCA 90 bp ATCAAAATATCATTTCAAGAGCAGTCATTCTGGATACCGACGGCTTTGTCAGTGTATCACTCACATCACTaGTGTAAGACTCATCATCTG +
Preference number: 4 (lower is better)
Translates to: IKISFQEQSFWIPTALSVYHSHH*CKTHHL
Trigger: CAGATGATGAGTCTTACATCAGTGATGTGAGTGATA...CACTGACAAAGCCGTCGGTATCCAGAATGACTGCTCTTGAAATGATATTTTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR TCA 90 bp TTAGCCATTATTAGGAATGCTTTGCTGAGGAGAAATACCACTAAAATCAACACCATGGCTAACCTGTTCTaGGAAAAAGCGGAATCCCTT +
Preference number: 4 (lower is better)
Translates to: LAIIRNALLRRNTTKINTMANLF*EKAESL
Trigger: AAGGGATTCCGCTTTTTCTCAGAACAGGTTAGCCAT...GGTGTTGATTTTAGTGGTATTTCTCCTCAGCAAAGCATTCCTAATAATGGCTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR TCA 90 bp GGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATATGGCTAACCTGTTCTaGGAAAAAGCGGAATCCCTT +
Preference number: 4 (lower is better)
Translates to: GFQLTQKPHIAIRNIIVHMANLF*EKAESL
Trigger: AAGGGATTCCGCTTTTTCTCAGAACAGGTTAGCCAT...ATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR TCA 90 bp GGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATTTCTTTGATTCACAGTaGCAGGCAGAAATGGGTGGA +
Preference number: 4 (lower is better)
Translates to: GFQLTQKPHIAIRNIIVHFFDSQ*QAEMGG
Trigger: TCCACCCATTTCTGCCTGTCACTGTGAATCAAAGAA...ATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR TCA 90 bp TTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGTTCCATCTTCTCCCACTaGGGATGTTGTGTATGCAAG +
Preference number: 4 (lower is better)
Translates to: FQLTQKPHIAIRNIIVHSSIFSH*GCCVCK
Trigger: CTTGCATACACAACATCCTCAGTGGGAGAAGATGGA...ACTATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR TCA 90 bp ATTATCTGGACGCAGGACAGGAAATTAACGAGCCACGTAAATACAGAGATCTACCAGAAACAGGAATACTaGTGCAAGTTTTCTGCAAAA +
Preference number: 4 (lower is better)
Translates to: IIWTQDRKLTSHVNTEIYQKQEY*CKFSAK
Trigger: TTTTGCAGAAAACTTGCATCAGTATTCCTGTTTCTG...GTAGATCTCTGTATTTACGTGGCTCGTTAATTTCCTGTCCTGCGTCCAGATAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR TCA 90 bp AATATTCCTCTCTCTACAATTGCCCTCACTTCTATTTGGGAGGAAGGAATGGCTTTAGGAATGCTTTGCTaGGGAGAAATACCACTAAAA +
Preference number: 4 (lower is better)
Translates to: NIPLSTIALTSIWEEGMALGMLC*GEIPLK
Trigger: TTTTAGTGGTATTTCTCCTCAGCAAAGCATTCCTAA...AGCCATTCCTTCCTCCCAAATAGAAGTGAGGGCAATTGTAGAGAGAGGAATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR TCA 90 bp GGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGGCCATCGCACCAATaGATATTCCACAGGAGATAT +
Preference number: 4 (lower is better)
Translates to: GFQLTQKPHIAIRNIIVHRPSHQ*IFHRRY
Trigger: ATATCTCCTGTGGAATATTCATTGGTGCGATGGCCT...ATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR TCA 90 bp ATCCCAAAGTGGTTAGGGGCCTTGTCTAATGCACTTCTGAAAGTCCATTATAAAGCAGGATCTAATAATTaGTTAGTGGGGTTGCTGAAA +
Preference number: 4 (lower is better)
Translates to: IPKWLGALSNALLKVHYKAGSNN*LVGLLK
Trigger: TTTCAGCAACCCCACTAATCAATTATTAGATCCTGC...TTTATAATGGACTTTCAGAAGTGCATTAGACAAGGCCCCTAACCACTTTGGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR TCA 90 bp AGGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCACGACGGCTTTGTCAGTaGGTCTTTCATTACACAGAA +
Preference number: 4 (lower is better)
Translates to: RFSVDPETTHSYKKHNCARRLCQ*VFHYTE
Trigger: TTCTGTGTAATGAAAGACTCACTGACAAAGCCGTCG...TGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR GCA 90 bp TTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGTTTATCCTCAGATGCCTaGAGCTTTTCTCCTTGGGAC +
Preference number: 4 (lower is better)
Translates to: FQLTQKPHIAIRNIIVHSLSSDA*SFSPWD
Trigger: GTCCCAAGGAGAAAAGCTGCAGGCATCTGAGGATAA...ACTATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR GCA 90 bp TTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGTGTGTCCAAACCACCTTaGACCTTGGAGTCAAAGTCT +
Preference number: 4 (lower is better)
Translates to: FQLTQKPHIAIRNIIVHSVSKPP*TLESKS
Trigger: AGACTTTGACTCCAAGGTGCAAGGTGGTTTGGACAC...ACTATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR GCA 90 bp AGGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATATGAGCAGGGGAAATaGCCTTCTCATCTGAACTCA +
Preference number: 4 (lower is better)
Translates to: RFSVDPETTHSYKKHNCAYEQGK*PSHLNS
Trigger: TGAGTTCAGATGAGAAGGGCATTTCCCCTGCTCATA...TGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR GCA 90 bp AGGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCAATGTGCAAGATCTTCTaGACACCTGTCCATCTCTTC +
Preference number: 4 (lower is better)
Translates to: RFSVDPETTHSYKKHNCAMCKIF*TPVHLF
Trigger: GAAGAGATGGACAGGTGTGCAGAAGATCTTGCACAT...TGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR GCA 90 bp GGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATATGTGCAAGATCTTCTaGACACCTGTCCATCTCTTC +
Preference number: 4 (lower is better)
Translates to: GFQLTQKPHIAIRNIIVHMCKIF*TPVHLF
Trigger: GAAGAGATGGACAGGTGTGCAGAAGATCTTGCACAT...ATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR GCA 90 bp TTAGCCATTATTAGGAATGCTTTGCTGAGGAGAAATACCACTAAAATCAACACCGTCAGTAAAGTTAGGTaGCGACTGAGTTCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: LAIIRNALLRRNTTKINTVSKVR*RLSSLK
Trigger: CTTCAGAGAACTCAGTCGGCACCTAACTTTACTGAC...GGTGTTGATTTTAGTGGTATTTCTCCTCAGCAAAGCATTCCTAATAATGGCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CCA 90 bp ATCCCAAAGTGGTTAGGGGCCTTGTCTAATGCACTTCTGAAAGTCCATTATAAATCCAAGTCAGCTTTATaGTCAAAGCTGTTTCACAGT +
Preference number: 4 (lower is better)
Translates to: IPKWLGALSNALLKVHYKSKSAL*SKLFHS
Trigger: ACTGTGAAACAGCTTTGACCATAAAGCTGACTTGGA...TTTATAATGGACTTTCAGAAGTGCATTAGACAAGGCCCCTAACCACTTTGGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CCA 90 bp AGGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCAAACCACCTTGCACCTTaGAGTCAAAGTCTTCCAAGT +
Preference number: 4 (lower is better)
Translates to: RFSVDPETTHSYKKHNCANHLAP*SQSLPS
Trigger: ACTTGGAAGACTTTGACTCCAAGGTGCAAGGTGGTT...TGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CCA 90 bp GGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATTTCTATGGGTTGGAGTaGATGTTTTATGAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: GFQLTQKPHIAIRNIIVHFYGLE*MFYEQG
Trigger: CCCCTGCTCATAAAACATCCACTCCAACCCATAGAA...ATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CCA 90 bp AGGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATTCTATGGGTTGGAGTaGATGTTTTATGAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: RFSVDPETTHSYKKHNCAFYGLE*MFYEQG
Trigger: CCCCTGCTCATAAAACATCCACTCCAACCCATAGAA...TGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CCA 90 bp AGGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCAGGCACTTCTATGGGTTaGAGTGGATGTTTTATGAGC +
Preference number: 4 (lower is better)
Translates to: RFSVDPETTHSYKKHNCAGTSMG*SGCFMS
Trigger: GCTCATAAAACATCCACTCCAACCCATAGAAGTGCC...TGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CCA 90 bp AGGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCAGAGGAGGCACTTCTATaGGTTGGAGTGGATGTTTTA +
Preference number: 4 (lower is better)
Translates to: RFSVDPETTHSYKKHNCAEEALL*VGVDVL
Trigger: TAAAACATCCACTCCAACCCATAGAAGTGCCTCCTC...TGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CCA 90 bp GGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATCTGGTTTCTGGACATTaGTTTGGCCTATTTTCAGCC +
Preference number: 4 (lower is better)
Translates to: GFQLTQKPHIAIRNIIVHLVSGH*FGLFSA
Trigger: GGCTGAAAATAGGCCAAACCAATGTCCAGAAACCAG...ATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CCA 90 bp AGGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCACTGGTTTCTGGACATTaGTTTGGCCTATTTTCAGCC +
Preference number: 4 (lower is better)
Translates to: RFSVDPETTHSYKKHNCALVSGH*FGLFSA
Trigger: GGCTGAAAATAGGCCAAACCAATGTCCAGAAACCAG...TGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CCA 90 bp TTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGTGATGATGTCGCAGTTTaGAGACCCATGCATCAAACC +
Preference number: 4 (lower is better)
Translates to: FQLTQKPHIAIRNIIVHSDDVAV*RPMHQT
Trigger: GGTTTGATGCATGGGTCTCCAAACTGCGACATCATC...ACTATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CCA 90 bp GGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATCCACGGAAAGCTGTTTaGTTGCATCTTTCCATCCAT +
Preference number: 4 (lower is better)
Translates to: GFQLTQKPHIAIRNIIVHPRKAV*LHLSIH
Trigger: ATGGATGGAAAGATGCAACCAAACAGCTTTCCGTGG...ATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CCA 90 bp AGGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCAAACCATGCGCTCATATaGATCATCAGTTTCCGAAGC +
Preference number: 4 (lower is better)
Translates to: RFSVDPETTHSYKKHNCANHALI*IISFRS
Trigger: GCTTCGGAAACTGATGATCCATATGAGCGCATGGTT...TGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CCA 90 bp GGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAAGGACTGGGTTGAATaGCTTACTTCCTGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: GFQLTQKPHIAIRNIIVHKDWVE*LTSCSE
Trigger: TTCAGAGCAGGAAGTAAGCCATTCAACCCAGTCCTT...ATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CCA 90 bp AGGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCAAAGGACTGGGTTGAATaGCTTACTTCCTGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: RFSVDPETTHSYKKHNCAKDWVE*LTSCSE
Trigger: TTCAGAGCAGGAAGTAAGCCATTCAACCCAGTCCTT...TGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CCA 90 bp GGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATCATAGTTTGTTGGCATaGAACCTGGTCTCCAAATGC +
Preference number: 4 (lower is better)
Translates to: GFQLTQKPHIAIRNIIVHHSLLA*NLVSKC
Trigger: GCATTTGGAGACCAGGTTCCATGCCAACAAACTATG...ATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CCA 90 bp AGGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCACATAGTTTGTTGGCATaGAACCTGGTCTCCAAATGC +
Preference number: 4 (lower is better)
Translates to: RFSVDPETTHSYKKHNCAHSLLA*NLVSKC
Trigger: GCATTTGGAGACCAGGTTCCATGCCAACAAACTATG...TGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CCA 90 bp TTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGTCAGCTCATAGTTTGTTaGCATGGAACCTGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: FQLTQKPHIAIRNIIVHSQLIVC*HGTWSP
Trigger: TGGAGACCAGGTTCCATGCCAACAAACTATGAGCTG...ACTATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CCA 90 bp AGGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCAGAAAGGATCCCAAAGTaGTTAGGGGCCTTGTCTAAT +
Preference number: 4 (lower is better)
Translates to: RFSVDPETTHSYKKHNCAERIPK*LGALSN
Trigger: ATTAGACAAGGCCCCTAACCACTTTGGGATCCTTTC...TGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CCA 90 bp GGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATGAAAGGATCCCAAAGTaGTTAGGGGCCTTGTCTAAT +
Preference number: 4 (lower is better)
Translates to: GFQLTQKPHIAIRNIIVHERIPK*LGALSN
Trigger: ATTAGACAAGGCCCCTAACCACTTTGGGATCCTTTC...ATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CCA 90 bp TTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGTGGTGCTTCCAGACAGTaGAACAATCGTGTGGTTTCT +
Preference number: 4 (lower is better)
Translates to: FQLTQKPHIAIRNIIVHSGASRQ*NNRVVS
Trigger: AGAAACCACACGATTGTTCCACTGTCTGGAAGCACC...ACTATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CCA 90 bp ATCAAAATATCATTTCAAGAGCAGTCATTCTGGATACCGACGGCTTTGTCAGTGGGATGGTTTATTATCTaGACGCAGGACAGGAAATTA +
Preference number: 4 (lower is better)
Translates to: IKISFQEQSFWIPTALSVGWFII*TQDRKL
Trigger: TAATTTCCTGTCCTGCGTCCAGATAATAAACCATCC...CACTGACAAAGCCGTCGGTATCCAGAATGACTGCTCTTGAAATGATATTTTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR CCA 90 bp GAAGATTTTACTGCCGCAGGGCAAGCCACCTATGGATTTAAAATGGGAATGAGACTTATGAATAAACCATaGGAGAAGTATACAGGCATA +
Preference number: 4 (lower is better)
Translates to: EDFTAAGQATYGFKMGMRLMNKP*EKYTGI
Trigger: TATGCCTGTATACTTCTCCCATGGTTTATTCATAAG...TCTCATTCCCATTTTAAATCCATAGGTGGCTTGCCCTGCGGCAGTAAAATCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CCA 90 bp ATCAAAATATCATTTCAAGAGCAGTCATTCTGGATACCGACGGCTTTGTCAGTGAAGAAAATGACAAAGTaGCAAAGTGAGTCACAGGTC +
Preference number: 4 (lower is better)
Translates to: IKISFQEQSFWIPTALSVKKMTK*QSESQV
Trigger: GACCTGTGACTCACTTTGCCACTTTGTCATTTTCTT...CACTGACAAAGCCGTCGGTATCCAGAATGACTGCTCTTGAAATGATATTTTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000190611.9
3UTR CAA 72 bp AGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTaGTCTAATGCACTTCTGAAAGTCCATTATAAAGAT +
Preference number: 4 (lower is better)
Translates to: SKTERIPKWLGA*SNALLKVHYKD
Trigger: ATCTTTATAATGGACTTTCAGAAGTGCATTAGACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
3UTR CAA 72 bp TCATTTCAAGAGCAGTCATTCTGGATACCGACGGCTTaGTCAGTGAGTCTTTCATTACACAGAAGAGAAAAA +
Preference number: 4 (lower is better)
Translates to: SFQEQSFWIPTA*SVSLSLHRREK
Trigger: TTTTTCTCTTCTGTGTAATGAAAGACTCACTGACAAAGCCGTCGGTATCCAGAATGACTGCTCTTGAAATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR TCA 90 bp ATCCCAAAGTGGTTAGGGGCCTTGTCTAATGCACTTCTGAAAGTCCATTATAAAGTTGAAGGAAATATGTaGAAACTAGCATCTCTTGGT +
Preference number: 4 (lower is better)
Translates to: IPKWLGALSNALLKVHYKVEGNM*KLASLG
Trigger: ACCAAGAGATGCTAGTTTTCACATATTTCCTTCAAC...TTTATAATGGACTTTCAGAAGTGCATTAGACAAGGCCCCTAACCACTTTGGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR TCA 90 bp TTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGTTGGCTAGGGGGAGTCTaGAATTCAATATCTGCACAA +
Preference number: 4 (lower is better)
Translates to: FQLTQKPHIAIRNIIVHSWLGGV*NSISAQ
Trigger: TTGTGCAGATATTGAATTTCAGACTCCCCCTAGCCA...ACTATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR TCA 90 bp TTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGTTTCTTTGATTCACAGTaGCAGGCAGAAATGGGTGGA +
Preference number: 4 (lower is better)
Translates to: FQLTQKPHIAIRNIIVHSFFDSQ*QAEMGG
Trigger: TCCACCCATTTCTGCCTGTCACTGTGAATCAAAGAA...ACTATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR TCA 90 bp GGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATCATACTTTGGAAGCATaGCATTCAGTGTTCCAACAG +
Preference number: 4 (lower is better)
Translates to: GFQLTQKPHIAIRNIIVHHTLEA*HSVFQQ
Trigger: CTGTTGGAACACTGAATGTCATGCTTCCAAAGTATG...ATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR TCA 90 bp TTAGCCATTATTAGGAATGCTTTGCTGAGGAGAAATACCACTAAAATCAACACCATGTTTAGGCTATTTTaGGACTGTTCAGGGAAGTGC +
Preference number: 4 (lower is better)
Translates to: LAIIRNALLRRNTTKINTMFRLF*DCSGKC
Trigger: GCACTTCCCTGAACAGTCTCAAAATAGCCTAAACAT...GGTGTTGATTTTAGTGGTATTTCTCCTCAGCAAAGCATTCCTAATAATGGCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR TCA 90 bp AACTCAGATGCAAGGGAGGAGTTTTGGATAAATAAAATATTGCGCCATCTAGTGAATGACCATCTCCAATaGGATGAAGCAGCTTATGAA +
Preference number: 4 (lower is better)
Translates to: NSDAREEFWINKILRHLVNDHLQ*DEAAYE
Trigger: TTCATAAGCTGCTTCATCTCATTGGAGATGGTCATT...CACTAGATGGCGCAATATTTTATTTATCCAAAACTCCTCCCTTGCATCTGAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR TCA 90 bp AACTCAGATGCAAGGGAGGAGTTTTGGATAAATAAAATATTGCGCCATCTAGTGCCTCATTATCTAGGATaGCAGAGAACAAGATTAGAC +
Preference number: 4 (lower is better)
Translates to: NSDAREEFWINKILRHLVPHYLG*QRTRLD
Trigger: GTCTAATCTTGTTCTCTGTCATCCTAGATAATGAGG...CACTAGATGGCGCAATATTTTATTTATCCAAAACTCCTCCCTTGCATCTGAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR TCA 90 bp ATCCCAAAGTGGTTAGGGGCCTTGTCTAATGCACTTCTGAAAGTCCATTATAAAACAAAAGGATGCATATaGCAGGTAAGTTCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: IPKWLGALSNALLKVHYKTKGCI*QVSSFP
Trigger: TGGAAAAGAACTTACCTGTCATATGCATCCTTTTGT...TTTATAATGGACTTTCAGAAGTGCATTAGACAAGGCCCCTAACCACTTTGGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR GCA 90 bp TTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGTTATGAGCAGGGGAAATaGCCTTCTCATCTGAACTCA +
Preference number: 4 (lower is better)
Translates to: FQLTQKPHIAIRNIIVHSYEQGK*PSHLNS
Trigger: TGAGTTCAGATGAGAAGGGCATTTCCCCTGCTCATA...ACTATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR GCA 90 bp TTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGTGTCAGTAAAGTTAGGTaGCGACTGAGTTCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: FQLTQKPHIAIRNIIVHSVSKVR*RLSSLK
Trigger: CTTCAGAGAACTCAGTCGGCACCTAACTTTACTGAC...ACTATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR GCA 90 bp ATCCCAAAGTGGTTAGGGGCCTTGTCTAATGCACTTCTGAAAGTCCATTATAAAGACTTCAAAAGAGAATaGACTTTCTGTGCGATTAGA +
Preference number: 4 (lower is better)
Translates to: IPKWLGALSNALLKVHYKDFKRE*TFCAIR
Trigger: TCTAATCGCACAGAAAGTGCATTCTCTTTTGAAGTC...TTTATAATGGACTTTCAGAAGTGCATTAGACAAGGCCCCTAACCACTTTGGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR GCA 90 bp GGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATCCGAGAAATATTGTCTaGAACACTGGTGTTGTCTTC +
Preference number: 4 (lower is better)
Translates to: GFQLTQKPHIAIRNIIVHPRNIV*NTGVVF
Trigger: GAAGACAACACCAGTGTTGCAGACAATATTTCTCGG...ATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR GCA 90 bp TTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGTGAATGGCTTACTTCCTaGTCTGAAATAGGTGGAGCA +
Preference number: 4 (lower is better)
Translates to: FQLTQKPHIAIRNIIVHSEWLTS*SEIGGA
Trigger: TGCTCCACCTATTTCAGAGCAGGAAGTAAGCCATTC...ACTATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR GCA 90 bp ATTATCTGGACGCAGGACAGGAAATTAACGAGCCACGTAAATACAGAGATCTACTCCTTTGGTTTCTCTTaGCCAGAAAATTGCATTTTT +
Preference number: 4 (lower is better)
Translates to: IIWTQDRKLTSHVNTEIYSFGFS*PENCIF
Trigger: AAAAATGCAATTTTCTGGGCAAGAGAAACCAAAGGA...GTAGATCTCTGTATTTACGTGGCTCGTTAATTTCCTGTCCTGCGTCCAGATAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR GCA 90 bp ATCAAAATATCATTTCAAGAGCAGTCATTCTGGATACCGACGGCTTTGTCAGTGCACTTATCTGTAAGCTaGCTTAATCATGAAGCTTCA +
Preference number: 4 (lower is better)
Translates to: IKISFQEQSFWIPTALSVHLSVS*LNHEAS
Trigger: TGAAGCTTCATGATTAAGGCAGCTTACAGATAAGTG...CACTGACAAAGCCGTCGGTATCCAGAATGACTGCTCTTGAAATGATATTTTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR GCA 90 bp AGGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATCCTCTCTCTACAATTaGCCTCACTTCTATTTGGGA +
Preference number: 4 (lower is better)
Translates to: RFSVDPETTHSYKKHNCASSLYN*PHFYLG
Trigger: TCCCAAATAGAAGTGAGGGCAATTGTAGAGAGAGGA...TGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR CCA 90 bp TTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGTTTCTATGGGTTGGAGTaGATGTTTTATGAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: FQLTQKPHIAIRNIIVHSFYGLE*MFYEQG
Trigger: CCCCTGCTCATAAAACATCCACTCCAACCCATAGAA...ACTATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CCA 90 bp TTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGTGGCACTTCTATGGGTTaGAGTGGATGTTTTATGAGC +
Preference number: 4 (lower is better)
Translates to: FQLTQKPHIAIRNIIVHSGTSMG*SGCFMS
Trigger: GCTCATAAAACATCCACTCCAACCCATAGAAGTGCC...ACTATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CCA 90 bp TTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGTGAGGAGGCACTTCTATaGGTTGGAGTGGATGTTTTA +
Preference number: 4 (lower is better)
Translates to: FQLTQKPHIAIRNIIVHSEEALL*VGVDVL
Trigger: TAAAACATCCACTCCAACCCATAGAAGTGCCTCCTC...ACTATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CCA 90 bp TTAGCCATTATTAGGAATGCTTTGCTGAGGAGAAATACCACTAAAATCAACACCTCCACAAGGTTTGACTaGCAATGTGCAAGATCTTCT +
Preference number: 4 (lower is better)
Translates to: LAIIRNALLRRNTTKINTSTRFD*QCARSS
Trigger: AGAAGATCTTGCACATTGCCAGTCAAACCTTGTGGA...GGTGTTGATTTTAGTGGTATTTCTCCTCAGCAAAGCATTCCTAATAATGGCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CCA 90 bp AGGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATCCACAAGGTTTGACTaGCAATGTGCAAGATCTTCT +
Preference number: 4 (lower is better)
Translates to: RFSVDPETTHSYKKHNCASTRFD*QCARSS
Trigger: AGAAGATCTTGCACATTGCCAGTCAAACCTTGTGGA...TGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CCA 90 bp ATTATCTGGACGCAGGACAGGAAATTAACGAGCCACGTAAATACAGAGATCTACTATTGTCTGCAACACTaGTGTTGTCTTCAGATATAT +
Preference number: 4 (lower is better)
Translates to: IIWTQDRKLTSHVNTEIYYCLQH*CCLQIY
Trigger: ATATATCTGAAGACAACACCAGTGTTGCAGACAATA...GTAGATCTCTGTATTTACGTGGCTCGTTAATTTCCTGTCCTGCGTCCAGATAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CCA 90 bp TTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGTAACCATGCGCTCATATaGATCATCAGTTTCCGAAGC +
Preference number: 4 (lower is better)
Translates to: FQLTQKPHIAIRNIIVHSNHALI*IISFRS
Trigger: GCTTCGGAAACTGATGATCCATATGAGCGCATGGTT...ACTATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CCA 90 bp TTAGCCATTATTAGGAATGCTTTGCTGAGGAGAAATACCACTAAAATCAACACCTCTATCACCACCCCCTaGACTTCATTCATGTTAGAA +
Preference number: 4 (lower is better)
Translates to: LAIIRNALLRRNTTKINTSITTP*TSFMLE
Trigger: TTCTAACATGAATGAAGTCCAGGGGGTGGTGATAGA...GGTGTTGATTTTAGTGGTATTTCTCCTCAGCAAAGCATTCCTAATAATGGCTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CCA 90 bp GGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATTCTATCACCACCCCCTaGACTTCATTCATGTTAGAA +
Preference number: 4 (lower is better)
Translates to: GFQLTQKPHIAIRNIIVHSITTP*TSFMLE
Trigger: TTCTAACATGAATGAAGTCCAGGGGGTGGTGATAGA...ATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CCA 90 bp TTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGTGAAAGGATCCCAAAGTaGTTAGGGGCCTTGTCTAAT +
Preference number: 4 (lower is better)
Translates to: FQLTQKPHIAIRNIIVHSERIPK*LGALSN
Trigger: ATTAGACAAGGCCCCTAACCACTTTGGGATCCTTTC...ACTATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CCA 90 bp AGGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCACATGGGATTGAGACATaGATTACATGGTGCTTCACT +
Preference number: 4 (lower is better)
Translates to: RFSVDPETTHSYKKHNCAHGIET*ITWCFT
Trigger: AGTGAAGCACCATGTAATCCATGTCTCAATCCCATG...TGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CCA 90 bp GGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATTGCTTCTGTTCTCAGTaGAATTCGACTAGTGTCAGT +
Preference number: 4 (lower is better)
Translates to: GFQLTQKPHIAIRNIIVHCFCSQ*NSTSVS
Trigger: ACTGACACTAGTCGAATTCCACTGAGAACAGAAGCA...ATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CCA 90 bp TTAGCCATTATTAGGAATGCTTTGCTGAGGAGAAATACCACTAAAATCAACACCTGGACTCAGAATCTTTaGAGGGAAACTCAGGAATCA +
Preference number: 4 (lower is better)
Translates to: LAIIRNALLRRNTTKINTWTQNL*RETQES
Trigger: TGATTCCTGAGTTTCCCTCCAAAGATTCTGAGTCCA...GGTGTTGATTTTAGTGGTATTTCTCCTCAGCAAAGCATTCCTAATAATGGCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000190611.9
3UTR CAA 72 bp TTGAAGAGTAAACTTCTGGTTATCTGGCTGGTTAGATaGCCTCTAGGAATGTATTTTTACGTTCTCCGGTTT +
Preference number: 4 (lower is better)
Translates to: LKSKLLVIWLVR*PLGMYFYVLRF
Trigger: AAACCGGAGAACGTAAAAATACATTCCTAGAGGCAATCTAACCAGCCAGATAACCAGAAGTTTACTCTTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR TCA 90 bp GGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATTTCATGAATCAGGTTTaGCTAGAAAAGAGCAGGCAA +
Preference number: 4 (lower is better)
Translates to: GFQLTQKPHIAIRNIIVHFMNQV*LEKSRQ
Trigger: TTGCCTGCTCTTTTCTAGTCAAACCTGATTCATGAA...ATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR TCA 90 bp AGGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATTCAGCTGTGGACGTTaGAGGAAATATGTGAAAACT +
Preference number: 4 (lower is better)
Translates to: RFSVDPETTHSYKKHNCAFSCGR*RKYVKT
Trigger: AGTTTTCACATATTTCCTTCAACGTCCACAGCTGAA...TGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR TCA 90 bp GGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATTTCAGCTGTGGACGTTaGAGGAAATATGTGAAAACT +
Preference number: 4 (lower is better)
Translates to: GFQLTQKPHIAIRNIIVHFSCGR*RKYVKT
Trigger: AGTTTTCACATATTTCCTTCAACGTCCACAGCTGAA...ATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR TCA 90 bp AGGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCACTTTGTATAATCTGTTaGACTTTCCAGAGGGTCAGT +
Preference number: 4 (lower is better)
Translates to: RFSVDPETTHSYKKHNCALCIIC*TFQRVS
Trigger: ACTGACCCTCTGGAAAGTTCAACAGATTATACAAAG...TGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR TCA 90 bp TTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGTCATACTTTGGAAGCATaGCATTCAGTGTTCCAACAG +
Preference number: 4 (lower is better)
Translates to: FQLTQKPHIAIRNIIVHSHTLEA*HSVFQQ
Trigger: CTGTTGGAACACTGAATGTCATGCTTCCAAAGTATG...ACTATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR TCA 90 bp AGGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATGTGTATGCAAGTGGTaGCTTTATTCCACACATAGT +
Preference number: 4 (lower is better)
Translates to: RFSVDPETTHSYKKHNCACVCKW*LYSTHS
Trigger: ACTATGTGTGGAATAAAGTCACCACTTGCATACACA...TGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR TCA 90 bp GGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATTGTGTATGCAAGTGGTaGCTTTATTCCACACATAGT +
Preference number: 4 (lower is better)
Translates to: GFQLTQKPHIAIRNIIVHCVCKW*LYSTHS
Trigger: ACTATGTGTGGAATAAAGTCACCACTTGCATACACA...ATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR TCA 90 bp GGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATGCAGGATCTAATAATTaGTTAGTGGGGTTGCTGAAA +
Preference number: 4 (lower is better)
Translates to: GFQLTQKPHIAIRNIIVHAGSNN*LVGLLK
Trigger: TTTCAGCAACCCCACTAATCAATTATTAGATCCTGC...ATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR GCA 90 bp GGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATCTGAAATTCAATATCTaGACAAAGGTTGGGGTTGGA +
Preference number: 4 (lower is better)
Translates to: GFQLTQKPHIAIRNIIVHLKFNI*TKVGVG
Trigger: TCCAACCCCAACCTTTGTGCAGATATTGAATTTCAG...ATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR GCA 90 bp ATCAAAATATCATTTCAAGAGCAGTCATTCTGGATACCGACGGCTTTGTCAGTGAATATTCTACCCTTTTaGTATTTAGTCTTGACAGCC +
Preference number: 4 (lower is better)
Translates to: IKISFQEQSFWIPTALSVNILPF*YLVLTA
Trigger: GGCTGTCAAGACTAAATAGCAAAAGGGTAGAATATT...CACTGACAAAGCCGTCGGTATCCAGAATGACTGCTCTTGAAATGATATTTTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR GCA 90 bp TTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGTGCACTGAAAGGAACCTaGATGTCAGTAAAGTTAGGT +
Preference number: 4 (lower is better)
Translates to: FQLTQKPHIAIRNIIVHSALKGT*MSVKLG
Trigger: ACCTAACTTTACTGACATGCAGGTTCCTTTCAGTGC...ACTATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409045.7
CDS-3UTR CCA 90 bp AGGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATCCAAGTCAGCTTTATaGTCAAAGCTGTTTCACAGT +
Preference number: 4 (lower is better)
Translates to: RFSVDPETTHSYKKHNCASKSAL*SKLFHS
Trigger: ACTGTGAAACAGCTTTGACCATAAAGCTGACTTGGA...TGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CCA 90 bp TTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGTTTCTGGACATTGGTTTaGCCTATTTTCAGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: FQLTQKPHIAIRNIIVHSFWTLV*PIFSPS
Trigger: AGAAGGGCTGAAAATAGGCCAAACCAATGTCCAGAA...ACTATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CCA 90 bp ATCCCAAAGTGGTTAGGGGCCTTGTCTAATGCACTTCTGAAAGTCCATTATAAATATTGTCTGCAACACTaGTGTTGTCTTCAGATATAT +
Preference number: 4 (lower is better)
Translates to: IPKWLGALSNALLKVHYKYCLQH*CCLQIY
Trigger: ATATATCTGAAGACAACACCAGTGTTGCAGACAATA...TTTATAATGGACTTTCAGAAGTGCATTAGACAAGGCCCCTAACCACTTTGGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CCA 90 bp TTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGTCATGGGATTGAGACATaGATTACATGGTGCTTCACT +
Preference number: 4 (lower is better)
Translates to: FQLTQKPHIAIRNIIVHSHGIET*ITWCFT
Trigger: AGTGAAGCACCATGTAATCCATGTCTCAATCCCATG...ACTATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CCA 90 bp ATCAAAATATCATTTCAAGAGCAGTCATTCTGGATACCGACGGCTTTGTCAGTGCTTATGAATAAACCATaGGAGAAGTATACAGGCATA +
Preference number: 4 (lower is better)
Translates to: IKISFQEQSFWIPTALSVLMNKP*EKYTGI
Trigger: TATGCCTGTATACTTCTCCCATGGTTTATTCATAAG...CACTGACAAAGCCGTCGGTATCCAGAATGACTGCTCTTGAAATGATATTTTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR CCA 90 bp ATCAAAATATCATTTCAAGAGCAGTCATTCTGGATACCGACGGCTTTGTCAGTGAGATGTTGGACATGTTaGTCCATCACAACAATTTTT +
Preference number: 4 (lower is better)
Translates to: IKISFQEQSFWIPTALSVRCWTC*SITTIF
Trigger: AAAAATTGTTGTGATGGACCAACATGTCCAACATCT...CACTGACAAAGCCGTCGGTATCCAGAATGACTGCTCTTGAAATGATATTTTGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000190611.9
3UTR CAA 72 bp TTGCTTTATGAAAACTTAATATTCCTCTCTCTACAATaGCCCTCACTTCTATTTGGGAGGAAGGAATGGCTA +
Preference number: 4 (lower is better)
Translates to: LLYENLIFLSLQ*PSLLFGRKEWL
Trigger: TAGCCATTCCTTCCTCCCAAATAGAAGTGAGGGCAATTGTAGAGAGAGGAATATTAAGTTTTCATAAAGCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR TCA 90 bp AGGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCAGTTGAAGGAAATATGTaGAAACTAGCATCTCTTGGT +
Preference number: 4 (lower is better)
Translates to: RFSVDPETTHSYKKHNCAVEGNM*KLASLG
Trigger: ACCAAGAGATGCTAGTTTTCACATATTTCCTTCAAC...TGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR TCA 90 bp TTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGTTTCAGCTGTGGACGTTaGAGGAAATATGTGAAAACT +
Preference number: 4 (lower is better)
Translates to: FQLTQKPHIAIRNIIVHSFSCGR*RKYVKT
Trigger: AGTTTTCACATATTTCCTTCAACGTCCACAGCTGAA...ACTATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR TCA 90 bp TTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGTCTTTGTATAATCTGTTaGACTTTCCAGAGGGTCAGT +
Preference number: 4 (lower is better)
Translates to: FQLTQKPHIAIRNIIVHSLCIIC*TFQRVS
Trigger: ACTGACCCTCTGGAAAGTTCAACAGATTATACAAAG...ACTATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR TCA 90 bp TTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGTTATCACTCACATCACTaGTGTAAGACTCATCATCTG +
Preference number: 4 (lower is better)
Translates to: FQLTQKPHIAIRNIIVHSYHSHH*CKTHHL
Trigger: CAGATGATGAGTCTTACATCAGTGATGTGAGTGATA...ACTATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR TCA 90 bp GGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAAACACAAAATTCTTTaGTTCACAGTGACAGGCAGA +
Preference number: 4 (lower is better)
Translates to: GFQLTQKPHIAIRNIIVHKHKIL*FTVTGR
Trigger: TCTGCCTGTCACTGTGAATCAAAGAATTTTGTGTTT...ATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR TCA 90 bp TTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGTTGTGTATGCAAGTGGTaGCTTTATTCCACACATAGT +
Preference number: 4 (lower is better)
Translates to: FQLTQKPHIAIRNIIVHSCVCKW*LYSTHS
Trigger: ACTATGTGTGGAATAAAGTCACCACTTGCATACACA...ACTATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR GCA 90 bp GGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATGCACTGAAAGGAACCTaGAGTTGTATTTTTGTATCT +
Preference number: 4 (lower is better)
Translates to: GFQLTQKPHIAIRNIIVHALKGT*SCIFVS
Trigger: AGATACAAAAATACAACTGCAGGTTCCTTTCAGTGC...ATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000409631.5
CDS-3UTR GCA 90 bp TTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGTCTGAAATTCAATATCTaGACAAAGGTTGGGGTTGGA +
Preference number: 4 (lower is better)
Translates to: FQLTQKPHIAIRNIIVHSLKFNI*TKVGVG
Trigger: TCCAACCCCAACCTTTGTGCAGATATTGAATTTCAG...ACTATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR GCA 90 bp AGGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCAGACTTCAAAAGAGAATaGACTTTCTGTGCGATTAGA +
Preference number: 4 (lower is better)
Translates to: RFSVDPETTHSYKKHNCADFKRE*TFCAIR
Trigger: TCTAATCGCACAGAAAGTGCATTCTCTTTTGAAGTC...TGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR GCA 90 bp TTAGCCATTATTAGGAATGCTTTGCTGAGGAGAAATACCACTAAAATCAACACCGACTTCAAAAGAGAATaGACTTTCTGTGCGATTAGA +
Preference number: 4 (lower is better)
Translates to: LAIIRNALLRRNTTKINTDFKRE*TFCAIR
Trigger: TCTAATCGCACAGAAAGTGCATTCTCTTTTGAAGTC...GGTGTTGATTTTAGTGGTATTTCTCCTCAGCAAAGCATTCCTAATAATGGCTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR TCA 90 bp TTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGTCAGAAACAGGAATACTaGTGCAAGTTTTCTGCAAAA +
Preference number: 4 (lower is better)
Translates to: FQLTQKPHIAIRNIIVHSQKQEY*CKFSAK
Trigger: TTTTGCAGAAAACTTGCATCAGTATTCCTGTTTCTG...ACTATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR GCA 90 bp TTAGCCATTATTAGGAATGCTTTGCTGAGGAGAAATACCACTAAAATCAACACCCTGATGCAAGTTTTCTaGAAAAGCCTCTGTATATTA +
Preference number: 4 (lower is better)
Translates to: LAIIRNALLRRNTTKINTLMQVF*KSLCIL
Trigger: TAATATACAGAGGCTTTTGCAGAAAACTTGCATCAG...GGTGTTGATTTTAGTGGTATTTCTCCTCAGCAAAGCATTCCTAATAATGGCTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CCA 90 bp TTAGCCATTATTAGGAATGCTTTGCTGAGGAGAAATACCACTAAAATCAACACCTATTGTCTGCAACACTaGTGTTGTCTTCAGATATAT +
Preference number: 4 (lower is better)
Translates to: LAIIRNALLRRNTTKINTYCLQH*CCLQIY
Trigger: ATATATCTGAAGACAACACCAGTGTTGCAGACAATA...GGTGTTGATTTTAGTGGTATTTCTCCTCAGCAAAGCATTCCTAATAATGGCTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CCA 90 bp GGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATTATTGTCTGCAACACTaGTGTTGTCTTCAGATATAT +
Preference number: 4 (lower is better)
Translates to: GFQLTQKPHIAIRNIIVHYCLQH*CCLQIY
Trigger: ATATATCTGAAGACAACACCAGTGTTGCAGACAATA...ATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
3UTR CAA 72 bp TCATTTGATGGTGTATTAGCCATTATTAGGAATGCTTaGCTGAGGAGAAATACCACTAAAATCAACACCTCA +
Preference number: 4 (lower is better)
Translates to: SFDGVLAIIRNA*LRRNTTKINTS
Trigger: TGAGGTGTTGATTTTAGTGGTATTTCTCCTCAGCAAAGCATTCCTAATAATGGCTAATACACCATCAAATGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
3UTR CAA 72 bp GAAATTCAGTTAGGACTTACAGGACCGAATCCTACTTaGGATAGTATTATTTCTAAACAACTGGGAAGCTTT +
Preference number: 4 (lower is better)
Translates to: EIQLGLTGPNPT*DSIISKQLGSF
Trigger: AAAGCTTCCCAGTTGTTTAGAAATAATACTATCCAAAGTAGGATTCGGTCCTGTAAGTCCTAACTGAATTTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR GCA 90 bp TTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGTAATATTCTACCCTTTTaGTATTTAGTCTTGACAGCC +
Preference number: 4 (lower is better)
Translates to: FQLTQKPHIAIRNIIVHSNILPF*YLVLTA
Trigger: GGCTGTCAAGACTAAATAGCAAAAGGGTAGAATATT...ACTATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CCA 90 bp TTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGTAAACTGGTCAGACTTTaGATTTTATATTCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: FQLTQKPHIAIRNIIVHSKLVRL*ILYSAP
Trigger: AGGAGCAGAATATAAAATCCAAAGTCTGACCAGTTT...ACTATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS GCA 90 bp GTAGCACTGAAAGGAACTGTTGTAGCCACTGCTGCCGCTAGCCTCTaGCGGCGCCGAGTTGTGCTGAACTGGCCCTTCGCGGGTGGCCCT +
Preference number: 5 (lower is better)
Translates to: VALKGTVVATAAASL*RRRVVLNWPFAGGP
Trigger: AGGGCCACCCGCGAAGGGCCAGTTCAGCACAACTCGGCGCCGGCAGAGGCTAGCGGCAGCAGTGGCTACAACAGTTCCTTTCAGTGCTAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315022.2
ENST00000392505.6
CDS GCA 90 bp CTGTCAGCTTCCTTGGAGAGGGGGACTGGCTCCGGTTCTAGCAATTaGCGACTTACAGAGGGCTCGGTGCTAGAGGAAGCAGTCCTCTCC +
Preference number: 5 (lower is better)
Translates to: LSASLERGTGSGSSN*RLTEGSVLEEAVLS
Trigger: GGAGAGGACTGCTTCCTCTAGCACCGAGCCCTCTGTAAGTCGGCAATTGCTAGAACCGGAGCCAGTCCCCCTCTCCAAGGAAGCTGACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000190611.9
ENST00000315022.2
ENST00000357080.8
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
ENST00000477097.1
CDS GCA 90 bp GCTCACCAGCCTGAGACAGTGACTGTCGGAGCCGTGCCATCTGCGTaGTGTGGCCTTTACTGTGATCCTGCTCGGAAACCATCTGCTTCA +
Preference number: 5 (lower is better)
Translates to: AHQPETVTVGAVPSA*CGLYCDPARKPSAS
Trigger: TGAAGCAGATGGTTTCCGAGCAGGATCACAGTAAAGGCCACAGCACGCAGATGGCACGGCTCCGACAGTCACTGTCTCAGGCTGGTGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357080.8
ENST00000359685.7
ENST00000409631.5
CDS GCA 90 bp CTTCCGAGTCCTGTAACCAGGCTGCCACTTTACTCTGGCCAGTTGTaGACGTTGCAGGGAGGCTATTGCTGCATGGTAAAGGGGACTGCC +
Preference number: 5 (lower is better)
Translates to: LPSPVTRLPLYSGQL*TLQGGYCCMVKGTA
Trigger: GGCAGTCCCCTTTACCATGCAGCAATAGCCTCCCTGCAACGTGCACAACTGGCCAGAGTAAAGTGGCAGCCTGGTTACAGGACTCGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000190611.9
ENST00000315022.2
ENST00000357080.8
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS GCA 90 bp CCACAGGTTAATGTTACTGGTGTCAGGACAAGGAGCTGGCAGGCATaGTCGACGCCCATTTCGGAAGGCCCCTCCTGTAAGCTCCCCATT +
Preference number: 5 (lower is better)
Translates to: PQVNVTGVRTRSWQA*STPISEGPSCKLPI
Trigger: AATGGGGAGCTTACAGGAGGGGCCTTCCGAAATGGGCGTCGAGCATGCCTGCCAGCTCCTTGTCCTGACACCAGTAACATTAACCTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000190611.9
ENST00000315022.2
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS TCA 90 bp TGGAGAGGCGGCTCTCATTGGCTACTTGCTGTGATAAGGGGAGACTaGCATGGATTTGCTCACCAGCCTGAGACAGTGACTGTCGGAGCC +
Preference number: 5 (lower is better)
Translates to: WRGGSHWLLAVIRGD*HGFAHQPETVTVGA
Trigger: GGCTCCGACAGTCACTGTCTCAGGCTGGTGAGCAAATCCATGTCAGTCTCCCCTTATCACAGCAAGTAGCCAATGAGAGCCGCCTCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357080.8
ENST00000359685.7
ENST00000409631.5
CDS-3UTR CAA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCGCACTGACCGACTGCTaGTGGCCCAGGAGTCCTGCG +
Preference number: 5 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVALTDC*WPRSPA
Trigger: CGCAGGACTCCTGGGCCACAAGCAGTCGGTCAGTGC...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS GCA 90 bp CTGCCACTTTACTCTGGCCAGTTGTGCACGTTGCAGGGAGGCTATTaGTGCATGGTAAAGGGGACTGCCACGGAAAGCTGTTTGGTTGCA +
Preference number: 5 (lower is better)
Translates to: LPLYSGQLCTLQGGY*CMVKGTATESCLVA
Trigger: TGCAACCAAACAGCTTTCCGTGGCAGTCCCCTTTACCATGCAGCAATAGCCTCCCTGCAACGTGCACAACTGGCCAGAGTAAAGTGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000190611.9
ENST00000315022.2
ENST00000357080.8
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCCAGCTGTCAGCTTCCTaGGAGAGGGGGACTGGCTCC +
Preference number: 5 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVQLSAS*ERGTGS
Trigger: GGAGCCAGTCCCCCTCTCCAAGGAAGCTGACAGCTG...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS TCA 90 bp AGTGACTGTCGGAGCCGTGCCATCTGCGTGCTGTGGCCTTTACTGTaGTCCTGCTCGGAAACCATCTGCTTCAGCTTCTCCTTCTCTATA +
Preference number: 5 (lower is better)
Translates to: SDCRSRAICVLWPLL*SCSETICFSFSFSI
Trigger: TATAGAGAAGGAGAAGCTGAAGCAGATGGTTTCCGAGCAGGATCACAGTAAAGGCCACAGCACGCAGATGGCACGGCTCCGACAGTCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000190611.9
ENST00000315022.2
ENST00000357080.8
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS GCA 90 bp CCACTTTACTCTGGCCAGTTGTGCACGTTGCAGGGAGGCTATTGCTaGATGGTAAAGGGGACTGCCACGGAAAGCTGTTTGGTTGCATCT +
Preference number: 5 (lower is better)
Translates to: PLYSGQLCTLQGGYC*MVKGTATESCLVAS
Trigger: AGATGCAACCAAACAGCTTTCCGTGGCAGTCCCCTTTACCATGCAGCAATAGCCTCCCTGCAACGTGCACAACTGGCCAGAGTAAAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000190611.9
ENST00000315022.2
ENST00000357080.8
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS CCA 90 bp CTGTCCATCTCTTCCGAGTCCTGTAACCAGGCTGCCACTTTACTCTaGCCAGTTGTGCACGTTGCAGGGAGGCTATTGCTGCATGGTAAA +
Preference number: 5 (lower is better)
Translates to: LSISSESCNQAATLL*PVVHVAGRLLLHGK
Trigger: TTTACCATGCAGCAATAGCCTCCCTGCAACGTGCACAACTGGCCAGAGTAAAGTGGCAGCCTGGTTACAGGACTCGGAAGAGATGGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000190611.9
ENST00000315022.2
ENST00000357080.8
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS CCA 90 bp CAAGATATTCCACAGGTTAATGTTACTGGTGTCAGGACAAGGAGCTaGCAGGCATGCTCGACGCCCATTTCGGAAGGCCCCTCCTGTAAG +
Preference number: 5 (lower is better)
Translates to: QDIPQVNVTGVRTRS*QACSTPISEGPSCK
Trigger: CTTACAGGAGGGGCCTTCCGAAATGGGCGTCGAGCATGCCTGCCAGCTCCTTGTCCTGACACCAGTAACATTAACCTGTGGAATATCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000190611.9
ENST00000315022.2
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp TGCTTCTGTTCTCAGTGGAATTCGACTAGTGTCAGTGGAGCGGGCATGGGATTGGTTGCAGGGAGGCTATaGCTGCATGGTAAAGGGGAC +
Preference number: 5 (lower is better)
Translates to: CFCSQWNSTSVSGAGMGLVAGRL*LHGKGD
Trigger: GTCCCCTTTACCATGCAGCAATAGCCTCCCTGCAAC...CAATCCCATGCCCGCTCCACTGACACTAGTCGAATTCCACTGAGAACAGAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CAA 90 bp TTCCCTGATGGGTCCTGGATCCTCTTCCAGCTACCTGATACCACATCTGATGGTAGGCGGGTGAAACACTaGAGGTCAGGAGTTCGAGAC +
Preference number: 5 (lower is better)
Translates to: FPDGSWILFQLPDTTSDGRRVKH*RSGVRD
Trigger: GTCTCGAACTCCTGACCTCAAGTGTTTCACCCGCCT...ACCATCAGATGTGGTATCAGGTAGCTGGAAGAGGATCCAGGACCCATCAGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS GCA 90 bp GCTATCTGGGTAAATTATAGGGGTGGCTCCTTAATATCCTTCTGTTaGTGTTTTCCCAGCAAGTGGCAGAACCTGGAGGGCGAGCGGTGG +
Preference number: 5 (lower is better)
Translates to: AIWVNYRGGSLISFC*CFPSKWQNLEGERW
Trigger: CCACCGCTCGCCCTCCAGGTTCTGCCACTTGCTGGGAAAACAGCAACAGAAGGATATTAAGGAGCCACCCCTATAATTTACCCAGATAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000357080.8
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
CDS CCA 90 bp GGAGCACCTCTTGGGCATCAAAGAACTCAGAAACAGACTCTGACATaGAGAGGCGGCTCTCATTGGCTACTTGCTGTGATAAGGGGAGAC +
Preference number: 5 (lower is better)
Translates to: GAPLGHQRTQKQTLT*RGGSHWLLAVIRGD
Trigger: GTCTCCCCTTATCACAGCAAGTAGCCAATGAGAGCCGCCTCTCCATGTCAGAGTCTGTTTCTGAGTTCTTTGATGCCCAAGAGGTGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000190611.9
ENST00000315022.2
ENST00000357080.8
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp GAAGATTTTACTGCCGCAGGGCAAGCCACCTATGGATTTAAAATGGGAATGAGACAGCTGTCAGCTTCCTaGGAGAGGGGGACTGGCTCC +
Preference number: 5 (lower is better)
Translates to: EDFTAAGQATYGFKMGMRQLSAS*ERGTGS
Trigger: GGAGCCAGTCCCCCTCTCCAAGGAAGCTGACAGCTG...TCTCATTCCCATTTTAAATCCATAGGTGGCTTGCCCTGCGGCAGTAAAATCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CAA 90 bp AGCATCACATCTTTTTCGACAAGGCCAGCACAATCACACCACATCAAACAGACACAGCTGTCAGCTTCCTaGGAGAGGGGGACTGGCTCC +
Preference number: 5 (lower is better)
Translates to: SITSFSTRPAQSHHIKQTQLSAS*ERGTGS
Trigger: GGAGCCAGTCCCCCTCTCCAAGGAAGCTGACAGCTG...TGTCTGTTTGATGTGGTGTGATTGTGCTGGCCTTGTCGAAAAAGATGTGATGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CAA 90 bp TGCTTCTGTTCTCAGTGGAATTCGACTAGTGTCAGTGGAGCGGGCATGGGATTGGCACAAAGGTTGGGGTaGGAGGAATGCAAGCGAACT +
Preference number: 5 (lower is better)
Translates to: CFCSQWNSTSVSGAGMGLAQRLG*EECKRT
Trigger: AGTTCGCTTGCATTCCTCCAACCCCAACCTTTGTGC...CAATCCCATGCCCGCTCCACTGACACTAGTCGAATTCCACTGAGAACAGAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CAA 90 bp TGCTTCTGTTCTCAGTGGAATTCGACTAGTGTCAGTGGAGCGGGCATGGGATTGGGAGCGGGCATGGGATaGAGACATGGATTACATGGT +
Preference number: 5 (lower is better)
Translates to: CFCSQWNSTSVSGAGMGLGAGMG*RHGLHG
Trigger: ACCATGTAATCCATGTCTCAATCCCATGCCCGCTCC...CAATCCCATGCCCGCTCCACTGACACTAGTCGAATTCCACTGAGAACAGAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS GCA 90 bp TCAGAAACAGACTCTGACATGGAGAGGCGGCTCTCATTGGCTACTTaGTGTGATAAGGGGAGACTGACATGGATTTGCTCACCAGCCTCA +
Preference number: 5 (lower is better)
Translates to: SETDSDMERRLSLAT*CDKGRLTWICSPAS
Trigger: TGAGGCTGGTGAGCAAATCCATGTCAGTCTCCCCTTATCACAGCAAGTAGCCAATGAGAGCCGCCTCTCCATGTCAGAGTCTGTTTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000190611.9
ENST00000315022.2
ENST00000392505.6
ENST00000409045.7
CDS-3UTR CAA 90 bp ATATACTGGGCCAAGTGCAAACATTTATTACATCCCCTGGTGTGTGCAGAGCTCCTTTACTCTGGCCAGTaGTGCACGTTGCAGGGAGGC +
Preference number: 5 (lower is better)
Translates to: IYWAKCKHLLHPLVCAELLYSGQ*CTLQGG
Trigger: GCCTCCCTGCAACGTGCACAACTGGCCAGAGTAAAG...GAGCTCTGCACACACCAGGGGATGTAATAAATGTTTGCACTTGGCCCAGTATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CAA 90 bp TGCTTCTGTTCTCAGTGGAATTCGACTAGTGTCAGTGGAGCGGGCATGGGATTGAGAGAGGAGCACCTCTaGGGCATCAAAGAACTCAGA +
Preference number: 5 (lower is better)
Translates to: CFCSQWNSTSVSGAGMGLREEHL*GIKELR
Trigger: TCTGAGTTCTTTGATGCCCAAGAGGTGCTCCTCTCT...CAATCCCATGCCCGCTCCACTGACACTAGTCGAATTCCACTGAGAACAGAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CAA 90 bp TGCTTCTGTTCTCAGTGGAATTCGACTAGTGTCAGTGGAGCGGGCATGGGATTGACAGGGCTGTCTACTTaGCTAAACCCAGGGTCCTTT +
Preference number: 5 (lower is better)
Translates to: CFCSQWNSTSVSGAGMGLTGLST*LNPGSF
Trigger: AAAGGACCCTGGGTTTAGCAAAGTAGACAGCCCTGT...CAATCCCATGCCCGCTCCACTGACACTAGTCGAATTCCACTGAGAACAGAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CAA 90 bp TGCTTCTGTTCTCAGTGGAATTCGACTAGTGTCAGTGGAGCGGGCATGGGATTGAAACCACCTTGCACCTaGGAGTCAAAGTCTTCCAAG +
Preference number: 5 (lower is better)
Translates to: CFCSQWNSTSVSGAGMGLKPPCT*ESKSSK
Trigger: CTTGGAAGACTTTGACTCCAAGGTGCAAGGTGGTTT...CAATCCCATGCCCGCTCCACTGACACTAGTCGAATTCCACTGAGAACAGAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CAA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCGGTGTCCAAACCACCTaGCACCTTGGAGTCAAAGTC +
Preference number: 5 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVGVQTT*HLGVKV
Trigger: GACTTTGACTCCAAGGTGCAAGGTGGTTTGGACACC...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp AATATTCCTCTCTCTACAATTGCCCTCACTTCTATTTGGGAGGAAGGAATGGCTGGCCAGTTGTGCACGTaGCAGGGAGGCTATTGCTGC +
Preference number: 5 (lower is better)
Translates to: NIPLSTIALTSIWEEGMAGQLCT*QGGYCC
Trigger: GCAGCAATAGCCTCCCTGCAACGTGCACAACTGGCC...AGCCATTCCTTCCTCCCAAATAGAAGTGAGGGCAATTGTAGAGAGAGGAATATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR CAA 90 bp TTCTGTTACAACATGTTACTACTTGATGGCGGATACTGGGGTAATGGAAGGGGACTTTACTCTGGCCAGTaGTGCACGTTGCAGGGAGGC +
Preference number: 5 (lower is better)
Translates to: FCYNMLLLDGGYWGNGRGLYSGQ*CTLQGG
Trigger: GCCTCCCTGCAACGTGCACAACTGGCCAGAGTAAAG...TCCCCTTCCATTACCCCAGTATCCGCCATCAAGTAGTAACATGTTGTAACAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR CAA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCGAGAGGCGGCTCTCATaGGCTACTTGCTGTGATAAG +
Preference number: 5 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVERRLS*ATCCDK
Trigger: CTTATCACAGCAAGTAGCCAATGAGAGCCGCCTCTC...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCTCAGTTTCCGAAGCCTaGTCCAGGAGCTCGCTGTAT +
Preference number: 5 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVSVSEA*SRSSLY
Trigger: ATACAGCGAGCTCCTGGACAAGGCTTCGGAAACTGA...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCGGAACCGGGCGTCTGTaGGTGGAAGGAGATCTTTTA +
Preference number: 5 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVGTGRL*VEGDLL
Trigger: TAAAAGATCTCCTTCCACCAACAGACGCCCGGTTCC...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCGAGACTGACATGGATTaGCTCACCAGCCTGAGACAG +
Preference number: 5 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVETDMD*LTSLRQ
Trigger: CTGTCTCAGGCTGGTGAGCAAATCCATGTCAGTCTC...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359685.7
ENST00000409631.5
CDS CCA 90 bp CCCTTTGGGAGGATGTTGAAGAGGAGGCACTTCTATGGGTTGGAGTaGATGTTTTATGAGCAGGGGAAATGCCCTTCTCATCTGAACTCA +
Preference number: 5 (lower is better)
Translates to: PFGRMLKRRHFYGLE*MFYEQGKCPSHLNS
Trigger: TGAGTTCAGATGAGAAGGGCATTTCCCCTGCTCATAAAACATCCACTCCAACCCATAGAAGTGCCTCCTCTTCAACATCCTCCCAAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000190611.9
ENST00000357080.8
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCGCCACGGAAAGCTGTTaGGTTGCATCTTTCCATCCA +
Preference number: 5 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVATESC*VASFHP
Trigger: TGGATGGAAAGATGCAACCAAACAGCTTTCCGTGGC...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp ATCCCAAAGTGGTTAGGGGCCTTGTCTAATGCACTTCTGAAAGTCCATTATAAAGGCCAGTTGTGCACGTaGCAGGGAGGCTATTGCTGC +
Preference number: 5 (lower is better)
Translates to: IPKWLGALSNALLKVHYKGQLCT*QGGYCC
Trigger: GCAGCAATAGCCTCCCTGCAACGTGCACAACTGGCC...TTTATAATGGACTTTCAGAAGTGCATTAGACAAGGCCCCTAACCACTTTGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCAGAGAGGAGCACCTCTaGGGCATCAAAGAACTCAGA +
Preference number: 5 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVREEHL*GIKELR
Trigger: TCTGAGTTCTTTGATGCCCAAGAGGTGCTCCTCTCT...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCCATTCTCTGACGAACTaGCAGAGAGGAGCACCTCTT +
Preference number: 5 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVHSLTN*QRGAPL
Trigger: AAGAGGTGCTCCTCTCTGCAAGTTCGTCAGAGAATG...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCACAGCTCATAGTTTGTaGGCATGGAACCTGGTCTCC +
Preference number: 5 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVTAHSL*AWNLVS
Trigger: GGAGACCAGGTTCCATGCCAACAAACTATGAGCTGT...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCACAGGGCTGTCTACTTaGCTAAACCCAGGGTCCTTT +
Preference number: 5 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVTGLST*LNPGSF
Trigger: AAAGGACCCTGGGTTTAGCAAAGTAGACAGCCCTGT...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp AGGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCAGCACTGACCGACTGCTaGTGGCCCAGGAGTCCTGCG +
Preference number: 5 (lower is better)
Translates to: RFSVDPETTHSYKKHNCAALTDC*WPRSPA
Trigger: CGCAGGACTCCTGGGCCACAAGCAGTCGGTCAGTGC...TGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CAA 90 bp TTCCCTGATGGGTCCTGGATCCTCTTCCAGCTACCTGATACCACATCTGATGGTACAACATGTTACTACTaGATGGCGGATACTGGGGTA +
Preference number: 5 (lower is better)
Translates to: FPDGSWILFQLPDTTSDGTTCYY*MADTGV
Trigger: TACCCCAGTATCCGCCATCAAGTAGTAACATGTTGT...ACCATCAGATGTGGTATCAGGTAGCTGGAAGAGGATCCAGGACCCATCAGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS TCA 90 bp GATGTTGAAGAGGAGGCACTTCTATGGGTTGGAGTGGATGTTTTATaGGCAGGGGAAATGCCCTTCTCATCTGAACTCATCGCTGCAGTT +
Preference number: 5 (lower is better)
Translates to: DVEEEALLWVGVDVL*AGEMPFSSELIAAV
Trigger: AACTGCAGCGATGAGTTCAGATGAGAAGGGCATTTCCCCTGCTCATAAAACATCCACTCCAACCCATAGAAGTGCCTCCTCTTCAACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000190611.9
ENST00000357080.8
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS TCA 90 bp GTTGAATGGCTTACTTCCTGCTCTGAAATAGGTGGAGCAGTATCCTaGAACTGCAAATGCGGCAACGAGAACCATGCGCTCATATGGATC +
Preference number: 5 (lower is better)
Translates to: VEWLTSCSEIGGAVS*NCKCGNENHALIWI
Trigger: GATCCATATGAGCGCATGGTTCTCGTTGCCGCATTTGCAGTTTCAGGATACTGCTCCACCTATTTCAGAGCAGGAAGTAAGCCATTCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000190611.9
ENST00000315022.2
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCAAACCACCTTGCACCTaGGAGTCAAAGTCTTCCAAG +
Preference number: 5 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVKPPCT*ESKSSK
Trigger: CTTGGAAGACTTTGACTCCAAGGTGCAAGGTGGTTT...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCAAAGAGCAGGCAATATaGAGGGTGTCCAAACCACCT +
Preference number: 5 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVKEQAI*RVSKPP
Trigger: AGGTGGTTTGGACACCCTCAATATTGCCTGCTCTTT...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp GGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATCAGCTGTCAGCTTCCTaGGAGAGGGGGACTGGCTCC +
Preference number: 5 (lower is better)
Translates to: GFQLTQKPHIAIRNIIVHQLSAS*ERGTGS
Trigger: GGAGCCAGTCCCCCTCTCCAAGGAAGCTGACAGCTG...ATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp AACTCAGATGCAAGGGAGGAGTTTTGGATAAATAAAATATTGCGCCATCTAGTGGGCCAGTTGTGCACGTaGCAGGGAGGCTATTGCTGC +
Preference number: 5 (lower is better)
Translates to: NSDAREEFWINKILRHLVGQLCT*QGGYCC
Trigger: GCAGCAATAGCCTCCCTGCAACGTGCACAACTGGCC...CACTAGATGGCGCAATATTTTATTTATCCAAAACTCCTCCCTTGCATCTGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CAA 90 bp TGCTTCTGTTCTCAGTGGAATTCGACTAGTGTCAGTGGAGCGGGCATGGGATTGCGTCTTGTGACCCGCTaGTCTTTCTTTGAAATATCT +
Preference number: 5 (lower is better)
Translates to: CFCSQWNSTSVSGAGMGLRLVTR*SFFEIS
Trigger: AGATATTTCAAAGAAAGACAAGCGGGTCACAAGACG...CAATCCCATGCCCGCTCCACTGACACTAGTCGAATTCCACTGAGAACAGAAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CAA 90 bp GAAGATTTTACTGCCGCAGGGCAAGCCACCTATGGATTTAAAATGGGAATGAGAGAGACTGACATGGATTaGCTCACCAGCCTCATCAGG +
Preference number: 5 (lower is better)
Translates to: EDFTAAGQATYGFKMGMRETDMD*LTSLIR
Trigger: CCTGATGAGGCTGGTGAGCAAATCCATGTCAGTCTC...TCTCATTCCCATTTTAAATCCATAGGTGGCTTGCCCTGCGGCAGTAAAATCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR CAA 90 bp ATATACTGGGCCAAGTGCAAACATTTATTACATCCCCTGGTGTGTGCAGAGCTCAGAGAGGAGCACCTCTaGGGCATCAAAGAACTCAGA +
Preference number: 5 (lower is better)
Translates to: IYWAKCKHLLHPLVCAELREEHL*GIKELR
Trigger: TCTGAGTTCTTTGATGCCCAAGAGGTGCTCCTCTCT...GAGCTCTGCACACACCAGGGGATGTAATAAATGTTTGCACTTGGCCCAGTATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CAA 90 bp TTCCCTGATGGGTCCTGGATCCTCTTCCAGCTACCTGATACCACATCTGATGGTATTTGCCGAGAAATATaGTCTGCAACACTGGTGTTG +
Preference number: 5 (lower is better)
Translates to: FPDGSWILFQLPDTTSDGICREI*SATLVL
Trigger: CAACACCAGTGTTGCAGACAATATTTCTCGGCAAAT...ACCATCAGATGTGGTATCAGGTAGCTGGAAGAGGATCCAGGACCCATCAGGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CAA 90 bp TGCTTCTGTTCTCAGTGGAATTCGACTAGTGTCAGTGGAGCGGGCATGGGATTGATTTGCCGAGAAATATaGTCTGCAACACTGGTGTTG +
Preference number: 5 (lower is better)
Translates to: CFCSQWNSTSVSGAGMGLICREI*SATLVL
Trigger: CAACACCAGTGTTGCAGACAATATTTCTCGGCAAAT...CAATCCCATGCCCGCTCCACTGACACTAGTCGAATTCCACTGAGAACAGAAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CAA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCCTCCCCATTCAGGATTaGCCGAGAAATATTGTCTGC +
Preference number: 5 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVLPIQD*PRNIVC
Trigger: GCAGACAATATTTCTCGGCAAATCCTGAATGGGGAG...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCATCAAACAGACACACTaGAAGTCTGCACTGACCGAC +
Preference number: 5 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVIKQTH*KSALTD
Trigger: GTCGGTCAGTGCAGACTTCAAGTGTGTCTGTTTGAT...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CAA 90 bp TTCTGTTACAACATGTTACTACTTGATGGCGGATACTGGGGTAATGGAAGGGGAGGAGCGGGCATGGGATaGAGACATGGATTACATGGT +
Preference number: 5 (lower is better)
Translates to: FCYNMLLLDGGYWGNGRGGAGMG*RHGLHG
Trigger: ACCATGTAATCCATGTCTCAATCCCATGCCCGCTCC...TCCCCTTCCATTACCCCAGTATCCGCCATCAAGTAGTAACATGTTGTAACAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR CAA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCGGGCAGGGGAAACTTTaGGGGATGATAGATATGTTC +
Preference number: 5 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVGQGKL*GMIDMF
Trigger: GAACATATCTATCATCCCCAAAAGTTTCCCCTGCCC...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR CAA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCAGGCACTTCTATGGGTaGGAGTGGATGTTTTATGAG +
Preference number: 5 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVRHFYG*EWMFYE
Trigger: CTCATAAAACATCCACTCCAACCCATAGAAGTGCCT...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp TTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGTCAGCTGTCAGCTTCCTaGGAGAGGGGGACTGGCTCC +
Preference number: 5 (lower is better)
Translates to: FQLTQKPHIAIRNIIVHSQLSAS*ERGTGS
Trigger: GGAGCCAGTCCCCCTCTCCAAGGAAGCTGACAGCTG...ACTATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCTCTGGTTTCTGGACATaGGTTTGGCCTATTTTCAGC +
Preference number: 5 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVSGFWT*VWPIFS
Trigger: GCTGAAAATAGGCCAAACCAATGTCCAGAAACCAGA...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp GGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATGGCCAGTTGTGCACGTaGCAGGGAGGCTATTGCTGC +
Preference number: 5 (lower is better)
Translates to: GFQLTQKPHIAIRNIIVHGQLCT*QGGYCC
Trigger: GCAGCAATAGCCTCCCTGCAACGTGCACAACTGGCC...ATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp ATTATCTGGACGCAGGACAGGAAATTAACGAGCCACGTAAATACAGAGATCTACGAGAGGCGGCTCTCATaGGCTACTTGCTGTGATAAG +
Preference number: 5 (lower is better)
Translates to: IIWTQDRKLTSHVNTEIYERRLS*ATCCDK
Trigger: CTTATCACAGCAAGTAGCCAATGAGAGCCGCCTCTC...GTAGATCTCTGTATTTACGTGGCTCGTTAATTTCCTGTCCTGCGTCCAGATAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CAA 90 bp TTCTGTTACAACATGTTACTACTTGATGGCGGATACTGGGGTAATGGAAGGGGAACAGCTCATAGTTTGTaGGCATGGAACCTGGTCTCC +
Preference number: 5 (lower is better)
Translates to: FCYNMLLLDGGYWGNGRGTAHSL*AWNLVS
Trigger: GGAGACCAGGTTCCATGCCAACAAACTATGAGCTGT...TCCCCTTCCATTACCCCAGTATCCGCCATCAAGTAGTAACATGTTGTAACAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR CAA 90 bp ATTATCTGGACGCAGGACAGGAAATTAACGAGCCACGTAAATACAGAGATCTACGGAACCGGGCGTCTGTaGGTGGAAGGAGATCTTTTA +
Preference number: 5 (lower is better)
Translates to: IIWTQDRKLTSHVNTEIYGTGRL*VEGDLL
Trigger: TAAAAGATCTCCTTCCACCAACAGACGCCCGGTTCC...GTAGATCTCTGTATTTACGTGGCTCGTTAATTTCCTGTCCTGCGTCCAGATAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CAA 90 bp AGCATCACATCTTTTTCGACAAGGCCAGCACAATCACACCACATCAAACAGACATTCTTCCAAAAATCTTaGATCTGGCCGGAACCGGGC +
Preference number: 5 (lower is better)
Translates to: SITSFSTRPAQSHHIKQTFFQKS*IWPEPG
Trigger: GCCCGGTTCCGGCCAGATCAAAGATTTTTGGAAGAA...TGTCTGTTTGATGTGGTGTGATTGTGCTGGCCTTGTCGAAAAAGATGTGATGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CAA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCAAGTGGTTAGGGGCCTaGTCTAATGCACTTCTGAAA +
Preference number: 5 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVKWLGA*SNALLK
Trigger: TTTCAGAAGTGCATTAGACAAGGCCCCTAACCACTT...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp TCTGAGAAGCATCACATCTTTTTCGACAAGGCCAGCACAATCACACCACATCAACCAAGCCACTGCTCCTaGGGGCAGGATCTAATAATT +
Preference number: 5 (lower is better)
Translates to: SEKHHIFFDKASTITPHQPSHCS*GQDLII
Trigger: AATTATTAGATCCTGCCCCAAGGAGCAGTGGCTTGG...TTGATGTGGTGTGATTGTGCTGGCCTTGTCGAAAAAGATGTGATGCTTCTCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CAA 90 bp ATATACTGGGCCAAGTGCAAACATTTATTACATCCCCTGGTGTGTGCAGAGCTCAGCTTTAAAAAGAACTaGAGTCCAGGCGCGGTTGCT +
Preference number: 5 (lower is better)
Translates to: IYWAKCKHLLHPLVCAELSFKKN*SPGAVA
Trigger: AGCAACCGCGCCTGGACTCAAGTTCTTTTTAAAGCT...GAGCTCTGCACACACCAGGGGATGTAATAAATGTTTGCACTTGGCCCAGTATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR CAA 90 bp TGCTTCTGTTCTCAGTGGAATTCGACTAGTGTCAGTGGAGCGGGCATGGGATTGATCTGGCTGGTTAGATaGCCTCTAGGAATGTATTTT +
Preference number: 5 (lower is better)
Translates to: CFCSQWNSTSVSGAGMGLIWLVR*PLGMYF
Trigger: AAAATACATTCCTAGAGGCAATCTAACCAGCCAGAT...CAATCCCATGCCCGCTCCACTGACACTAGTCGAATTCCACTGAGAACAGAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR CAA 90 bp GAAGATTTTACTGCCGCAGGGCAAGCCACCTATGGATTTAAAATGGGAATGAGAGATCAAGAGTGTGCTTaGCCACAGGATTTCCCTGCA +
Preference number: 5 (lower is better)
Translates to: EDFTAAGQATYGFKMGMRDQECA*PQDFPA
Trigger: TGCAGGGAAATCCTGTGGCAAAGCACACTCTTGATC...TCTCATTCCCATTTTAAATCCATAGGTGGCTTGCCCTGCGGCAGTAAAATCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS CCA 90 bp AAACCACCTTGCACCTTGGAGTCAAAGTCTTCCAAGTCAGCTTTATaGTCAAAGCTGTTTCACAGTGATTTATCCTCAGATGCCTGCAGC +
Preference number: 5 (lower is better)
Translates to: KPPCTLESKSSKSAL*SKLFHSDLSSDACS
Trigger: GCTGCAGGCATCTGAGGATAAATCACTGTGAAACAGCTTTGACCATAAAGCTGACTTGGAAGACTTTGACTCCAAGGTGCAAGGTGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000190611.9
ENST00000357080.8
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCCTTAATATCCTTCTGTaGCTGTTTTCCCAGCAAGTG +
Preference number: 5 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVLNILL*LFSQQV
Trigger: CACTTGCTGGGAAAACAGCAACAGAAGGATATTAAG...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCATAAAGCCCTCATGTTaGTCTGGTTTCTGGACATTG +
Preference number: 5 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVIKPSC*SGFWTL
Trigger: CAATGTCCAGAAACCAGACAAACATGAGGGCTTTAT...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp TTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGTGGCCAGTTGTGCACGTaGCAGGGAGGCTATTGCTGC +
Preference number: 5 (lower is better)
Translates to: FQLTQKPHIAIRNIIVHSGQLCT*QGGYCC
Trigger: GCAGCAATAGCCTCCCTGCAACGTGCACAACTGGCC...ACTATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp GGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATCTTTACTCTGGCCAGTaGTGCACGTTGCAGGGAGGC +
Preference number: 5 (lower is better)
Translates to: GFQLTQKPHIAIRNIIVHLYSGQ*CTLQGG
Trigger: GCCTCCCTGCAACGTGCACAACTGGCCAGAGTAAAG...ATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp AGGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCACTTTACTCTGGCCAGTaGTGCACGTTGCAGGGAGGC +
Preference number: 5 (lower is better)
Translates to: RFSVDPETTHSYKKHNCALYSGQ*CTLQGG
Trigger: GCCTCCCTGCAACGTGCACAACTGGCCAGAGTAAAG...TGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCCGTCTTGTGACCCGCTaGTCTTTCTTTGAAATATCT +
Preference number: 5 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVRLVTR*SFFEIS
Trigger: AGATATTTCAAAGAAAGACAAGCGGGTCACAAGACG...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409631.5
CDS-3UTR CAA 90 bp ATCCCAAAGTGGTTAGGGGCCTTGTCTAATGCACTTCTGAAAGTCCATTATAAAGCACAAAGGTTGGGGTaGGAGGAATGCAAGCGAACT +
Preference number: 5 (lower is better)
Translates to: IPKWLGALSNALLKVHYKAQRLG*EECKRT
Trigger: AGTTCGCTTGCATTCCTCCAACCCCAACCTTTGTGC...TTTATAATGGACTTTCAGAAGTGCATTAGACAAGGCCCCTAACCACTTTGGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCGCTTTGTATAATCTGTaGAACTTTCCAGAGGGTCAG +
Preference number: 5 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVALYNL*NFPEGQ
Trigger: CTGACCCTCTGGAAAGTTCAACAGATTATACAAAGC...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp ATCCCAAAGTGGTTAGGGGCCTTGTCTAATGCACTTCTGAAAGTCCATTATAAAGAGACTGACATGGATTaGCTCACCAGCCTCATCAGG +
Preference number: 5 (lower is better)
Translates to: IPKWLGALSNALLKVHYKETDMD*LTSLIR
Trigger: CCTGATGAGGCTGGTGAGCAAATCCATGTCAGTCTC...TTTATAATGGACTTTCAGAAGTGCATTAGACAAGGCCCCTAACCACTTTGGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000190611.9
ENST00000392505.6
ENST00000409045.7
CDS-3UTR CAA 90 bp ATCCCAAAGTGGTTAGGGGCCTTGTCTAATGCACTTCTGAAAGTCCATTATAAAGAGAGGCGGCTCTCATaGGCTACTTGCTGTGATAAG +
Preference number: 5 (lower is better)
Translates to: IPKWLGALSNALLKVHYKERRLS*ATCCDK
Trigger: CTTATCACAGCAAGTAGCCAATGAGAGCCGCCTCTC...TTTATAATGGACTTTCAGAAGTGCATTAGACAAGGCCCCTAACCACTTTGGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCATTTGCCGAGAAATATaGTCTGCAACACTGGTGTTG +
Preference number: 5 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVICREI*SATLVL
Trigger: CAACACCAGTGTTGCAGACAATATTTCTCGGCAAAT...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp ATCAAAATATCATTTCAAGAGCAGTCATTCTGGATACCGACGGCTTTGTCAGTGTCAGTTTCCGAAGCCTaGTCCAGGAGCTCGCTGTAT +
Preference number: 5 (lower is better)
Translates to: IKISFQEQSFWIPTALSVSVSEA*SRSSLY
Trigger: ATACAGCGAGCTCCTGGACAAGGCTTCGGAAACTGA...CACTGACAAAGCCGTCGGTATCCAGAATGACTGCTCTTGAAATGATATTTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR CAA 90 bp ATCCCAAAGTGGTTAGGGGCCTTGTCTAATGCACTTCTGAAAGTCCATTATAAAGGAACCGGGCGTCTGTaGGTGGAAGGAGATCTTTTA +
Preference number: 5 (lower is better)
Translates to: IPKWLGALSNALLKVHYKGTGRL*VEGDLL
Trigger: TAAAAGATCTCCTTCCACCAACAGACGCCCGGTTCC...TTTATAATGGACTTTCAGAAGTGCATTAGACAAGGCCCCTAACCACTTTGGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp ATTATCTGGACGCAGGACAGGAAATTAACGAGCCACGTAAATACAGAGATCTACTTCTTCCAAAAATCTTaGATCTGGCCGGAACCGGGC +
Preference number: 5 (lower is better)
Translates to: IIWTQDRKLTSHVNTEIYFFQKS*IWPEPG
Trigger: GCCCGGTTCCGGCCAGATCAAAGATTTTTGGAAGAA...GTAGATCTCTGTATTTACGTGGCTCGTTAATTTCCTGTCCTGCGTCCAGATAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CAA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCCTAGGTTTAGTAACTTaGTTTCCAGATGGGGAGAGA +
Preference number: 5 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVLGLVT*FPDGER
Trigger: TCTCTCCCCATCTGGAAACAAAGTTACTAAACCTAG...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR CAA 90 bp ATATACTGGGCCAAGTGCAAACATTTATTACATCCCCTGGTGTGTGCAGAGCTCCTTAATATCCTTCTGTaGCTGTTTTCCCAGCAAGTG +
Preference number: 5 (lower is better)
Translates to: IYWAKCKHLLHPLVCAELLNILL*LFSQQV
Trigger: CACTTGCTGGGAAAACAGCAACAGAAGGATATTAAG...GAGCTCTGCACACACCAGGGGATGTAATAAATGTTTGCACTTGGCCCAGTATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CAA 90 bp TGGACGCAGGACAGGAAATTAACGAGCCACGTAAATACAGAGATCTACTTAGCACTGCAGCTTTTCTCCTaGGGACATGATATGTCTTTG +
Preference number: 5 (lower is better)
Translates to: WTQDRKLTSHVNTEIYLALQLFS*GHDMSL
Trigger: CAAAGACATATCATGTCCCAAGGAGAAAAGCTGCAG...TGCTAAGTAGATCTCTGTATTTACGTGGCTCGTTAATTTCCTGTCCTGCGTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CAA 90 bp AGCATCACATCTTTTTCGACAAGGCCAGCACAATCACACCACATCAAACAGACAAGGCACTTCTATGGGTaGGAGTGGATGTTTTATGAG +
Preference number: 5 (lower is better)
Translates to: SITSFSTRPAQSHHIKQTRHFYG*EWMFYE
Trigger: CTCATAAAACATCCACTCCAACCCATAGAAGTGCCT...TGTCTGTTTGATGTGGTGTGATTGTGCTGGCCTTGTCGAAAAAGATGTGATGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CAA 90 bp ATCCCAAAGTGGTTAGGGGCCTTGTCTAATGCACTTCTGAAAGTCCATTATAAAGCCACGGAAAGCTGTTaGGTTGCATCTTTCCATCCA +
Preference number: 5 (lower is better)
Translates to: IPKWLGALSNALLKVHYKATESC*VASFHP
Trigger: TGGATGGAAAGATGCAACCAAACAGCTTTCCGTGGC...TTTATAATGGACTTTCAGAAGTGCATTAGACAAGGCCCCTAACCACTTTGGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp TTAGCCATTATTAGGAATGCTTTGCTGAGGAGAAATACCACTAAAATCAACACCGTTGCAGGGAGGCTATaGCTGCATGGTAAAGGGGAC +
Preference number: 5 (lower is better)
Translates to: LAIIRNALLRRNTTKINTVAGRL*LHGKGD
Trigger: GTCCCCTTTACCATGCAGCAATAGCCTCCCTGCAAC...GGTGTTGATTTTAGTGGTATTTCTCCTCAGCAAAGCATTCCTAATAATGGCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CAA 90 bp GGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATGTTGCAGGGAGGCTATaGCTGCATGGTAAAGGGGAC +
Preference number: 5 (lower is better)
Translates to: GFQLTQKPHIAIRNIIVHVAGRL*LHGKGD
Trigger: GTCCCCTTTACCATGCAGCAATAGCCTCCCTGCAAC...ATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp AGGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCAGTTGCAGGGAGGCTATaGCTGCATGGTAAAGGGGAC +
Preference number: 5 (lower is better)
Translates to: RFSVDPETTHSYKKHNCAVAGRL*LHGKGD
Trigger: GTCCCCTTTACCATGCAGCAATAGCCTCCCTGCAAC...TGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp ATCCCAAAGTGGTTAGGGGCCTTGTCTAATGCACTTCTGAAAGTCCATTATAAACATTCTCTGACGAACTaGCAGAGAGGAGCACCTCTT +
Preference number: 5 (lower is better)
Translates to: IPKWLGALSNALLKVHYKHSLTN*QRGAPL
Trigger: AAGAGGTGCTCCTCTCTGCAAGTTCGTCAGAGAATG...TTTATAATGGACTTTCAGAAGTGCATTAGACAAGGCCCCTAACCACTTTGGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCAGGTCTTTACCAATGTaGTTCCTCAAGATATTCCAC +
Preference number: 5 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVRSLPM*FLKIFH
Trigger: GTGGAATATCTTGAGGAACAACATTGGTAAAGACCT...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp AACTCAGATGCAAGGGAGGAGTTTTGGATAAATAAAATATTGCGCCATCTAGTGTCAGTTTCCGAAGCCTaGTCCAGGAGCTCGCTGTAT +
Preference number: 5 (lower is better)
Translates to: NSDAREEFWINKILRHLVSVSEA*SRSSLY
Trigger: ATACAGCGAGCTCCTGGACAAGGCTTCGGAAACTGA...CACTAGATGGCGCAATATTTTATTTATCCAAAACTCCTCCCTTGCATCTGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CAA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCAAAAAGCGGAATCCCTaGTCTTCTCTAATGCATTCA +
Preference number: 5 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVKKRNP*SSLMHS
Trigger: TGAATGCATTAGAGAAGACAAGGGATTCCGCTTTTT...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp ATCAAAATATCATTTCAAGAGCAGTCATTCTGGATACCGACGGCTTTGTCAGTGCTCCCACTGAGGATGTaGTGTATGCAAGTGGTGACT +
Preference number: 5 (lower is better)
Translates to: IKISFQEQSFWIPTALSVLPLRM*CMQVVT
Trigger: AGTCACCACTTGCATACACAACATCCTCAGTGGGAG...CACTGACAAAGCCGTCGGTATCCAGAATGACTGCTCTTGAAATGATATTTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR CAA 90 bp ATCCCAAAGTGGTTAGGGGCCTTGTCTAATGCACTTCTGAAAGTCCATTATAAACTCCCACTGAGGATGTaGTGTATGCAAGTGGTGACT +
Preference number: 5 (lower is better)
Translates to: IPKWLGALSNALLKVHYKLPLRM*CMQVVT
Trigger: AGTCACCACTTGCATACACAACATCCTCAGTGGGAG...TTTATAATGGACTTTCAGAAGTGCATTAGACAAGGCCCCTAACCACTTTGGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCACTGGATCTAACTCATaGAGCTCAATAGCAAACCTT +
Preference number: 5 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVTGSNS*SSIANL
Trigger: AAGGTTTGCTATTGAGCTCAATGAGTTAGATCCAGT...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp ATCCCAAAGTGGTTAGGGGCCTTGTCTAATGCACTTCTGAAAGTCCATTATAAACCAAGCCACTGCTCCTaGGGGCAGGATCTAATAATT +
Preference number: 5 (lower is better)
Translates to: IPKWLGALSNALLKVHYKPSHCS*GQDLII
Trigger: AATTATTAGATCCTGCCCCAAGGAGCAGTGGCTTGG...TTTATAATGGACTTTCAGAAGTGCATTAGACAAGGCCCCTAACCACTTTGGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CAA 90 bp GTATTATTTTCAGGGAAGAAGCTGACCTGGATCAAGAATGTCCTGCTAGACCTTGTGGACTCAGAATCTTaGGAGGGAAACTCAGGAATC +
Preference number: 5 (lower is better)
Translates to: VLFSGKKLTWIKNVLLDLVDSES*EGNSGI
Trigger: GATTCCTGAGTTTCCCTCCAAAGATTCTGAGTCCAC...AAGGTCTAGCAGGACATTCTTGATCCAGGTCAGCTTCTTCCCTGAAAATAATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR CAA 90 bp GTATTATTTTCAGGGAAGAAGCTGACCTGGATCAAGAATGTCCTGCTAGACCTTATTACAGGGCTGGCGTaGGGACAGAAGTCAAGAAAA +
Preference number: 5 (lower is better)
Translates to: VLFSGKKLTWIKNVLLDLITGLA*GQKSRK
Trigger: TTTTCTTGACTTCTGTCCCAACGCCAGCCCTGTAAT...AAGGTCTAGCAGGACATTCTTGATCCAGGTCAGCTTCTTCCCTGAAAATAATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS TCA 90 bp GTCAAAGTCTTCCAAGTCAGCTTTATGGTCAAAGCTGTTTCACAGTaGTTTATCCTCAGATGCCTGCAGCTTTTCTCCTTGGGACATGAT +
Preference number: 5 (lower is better)
Translates to: VKVFQVSFMVKAVSQ*FILRCLQLFSLGHD
Trigger: ATCATGTCCCAAGGAGAAAAGCTGCAGGCATCTGAGGATAAATCACTGTGAAACAGCTTTGACCATAAAGCTGACTTGGAAGACTTTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000190611.9
ENST00000357080.8
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp ATCCCAAAGTGGTTAGGGGCCTTGTCTAATGCACTTCTGAAAGTCCATTATAAAAAACCACCTTGCACCTaGGAGTCAAAGTCTTCCAAG +
Preference number: 5 (lower is better)
Translates to: IPKWLGALSNALLKVHYKKPPCT*ESKSSK
Trigger: CTTGGAAGACTTTGACTCCAAGGTGCAAGGTGGTTT...TTTATAATGGACTTTCAGAAGTGCATTAGACAAGGCCCCTAACCACTTTGGGAT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp AGGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCAGGTGTCCAAACCACCTaGCACCTTGGAGTCAAAGTC +
Preference number: 5 (lower is better)
Translates to: RFSVDPETTHSYKKHNCAGVQTT*HLGVKV
Trigger: GACTTTGACTCCAAGGTGCAAGGTGGTTTGGACACC...TGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp ATCAAAATATCATTTCAAGAGCAGTCATTCTGGATACCGACGGCTTTGTCAGTGAAAGAGCAGGCAATATaGAGGGTGTCCAAACCACCT +
Preference number: 5 (lower is better)
Translates to: IKISFQEQSFWIPTALSVKEQAI*RVSKPP
Trigger: AGGTGGTTTGGACACCCTCAATATTGCCTGCTCTTT...CACTGACAAAGCCGTCGGTATCCAGAATGACTGCTCTTGAAATGATATTTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR CAA 90 bp ATTATCTGGACGCAGGACAGGAAATTAACGAGCCACGTAAATACAGAGATCTACTCTGGTTTCTGGACATaGGTTTGGCCTATTTTCAGC +
Preference number: 5 (lower is better)
Translates to: IIWTQDRKLTSHVNTEIYSGFWT*VWPIFS
Trigger: GCTGAAAATAGGCCAAACCAATGTCCAGAAACCAGA...GTAGATCTCTGTATTTACGTGGCTCGTTAATTTCCTGTCCTGCGTCCAGATAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CAA 90 bp AGCATCACATCTTTTTCGACAAGGCCAGCACAATCACACCACATCAAACAGACAATAAAGCCCTCATGTTaGTCTGGTTTCTGGACATTG +
Preference number: 5 (lower is better)
Translates to: SITSFSTRPAQSHHIKQTIKPSC*SGFWTL
Trigger: CAATGTCCAGAAACCAGACAAACATGAGGGCTTTAT...TGTCTGTTTGATGTGGTGTGATTGTGCTGGCCTTGTCGAAAAAGATGTGATGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CAA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCTATCGAGTGGTGCCTTaGAATACTTTAACATTCCAT +
Preference number: 5 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVYRVVP*NTLTFH
Trigger: ATGGAATGTTAAAGTATTCAAAGGCACCACTCGATA...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp TTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGTGTTGCAGGGAGGCTATaGCTGCATGGTAAAGGGGAC +
Preference number: 5 (lower is better)
Translates to: FQLTQKPHIAIRNIIVHSVAGRL*LHGKGD
Trigger: GTCCCCTTTACCATGCAGCAATAGCCTCCCTGCAAC...ACTATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCGAAAGGAACCTGCAGTaGTATTTTTGTATCTTTGCT +
Preference number: 5 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVERNLQ*YFCIFA
Trigger: AGCAAAGATACAAAAATACAACTGCAGGTTCCTTTC...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000409631.5
CDS-3UTR CAA 90 bp TTAGCCATTATTAGGAATGCTTTGCTGAGGAGAAATACCACTAAAATCAACACCGCACAAAGGTTGGGGTaGGAGGAATGCAAGCGAACT +
Preference number: 5 (lower is better)
Translates to: LAIIRNALLRRNTTKINTAQRLG*EECKRT
Trigger: AGTTCGCTTGCATTCCTCCAACCCCAACCTTTGTGC...GGTGTTGATTTTAGTGGTATTTCTCCTCAGCAAAGCATTCCTAATAATGGCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CAA 90 bp AGGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCAGCACAAAGGTTGGGGTaGGAGGAATGCAAGCGAACT +
Preference number: 5 (lower is better)
Translates to: RFSVDPETTHSYKKHNCAAQRLG*EECKRT
Trigger: AGTTCGCTTGCATTCCTCCAACCCCAACCTTTGTGC...TGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp AGGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCAGAGAGGCGGCTCTCATaGGCTACTTGCTGTGATAAG +
Preference number: 5 (lower is better)
Translates to: RFSVDPETTHSYKKHNCAERRLS*ATCCDK
Trigger: CTTATCACAGCAAGTAGCCAATGAGAGCCGCCTCTC...TGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp AACTCAGATGCAAGGGAGGAGTTTTGGATAAATAAAATATTGCGCCATCTAGTGCATTCTCTGACGAACTaGCAGAGAGGAGCACCTCTT +
Preference number: 5 (lower is better)
Translates to: NSDAREEFWINKILRHLVHSLTN*QRGAPL
Trigger: AAGAGGTGCTCCTCTCTGCAAGTTCGTCAGAGAATG...CACTAGATGGCGCAATATTTTATTTATCCAAAACTCCTCCCTTGCATCTGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CAA 90 bp ATCCCAAAGTGGTTAGGGGCCTTGTCTAATGCACTTCTGAAAGTCCATTATAAACTCCCCATTCAGGATTaGCCGAGAAATATTGTCTGC +
Preference number: 5 (lower is better)
Translates to: IPKWLGALSNALLKVHYKLPIQD*PRNIVC
Trigger: GCAGACAATATTTCTCGGCAAATCCTGAATGGGGAG...TTTATAATGGACTTTCAGAAGTGCATTAGACAAGGCCCCTAACCACTTTGGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp ATATACTGGGCCAAGTGCAAACATTTATTACATCCCCTGGTGTGTGCAGAGCTCAAAAAGCGGAATCCCTaGTCTTCTCTAATGCATTCA +
Preference number: 5 (lower is better)
Translates to: IYWAKCKHLLHPLVCAELKKRNP*SSLMHS
Trigger: TGAATGCATTAGAGAAGACAAGGGATTCCGCTTTTT...GAGCTCTGCACACACCAGGGGATGTAATAAATGTTTGCACTTGGCCCAGTATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CAA 90 bp GGAATATGGTTGCAGCAAAACAGAAAGGATCCCAAAGTGGTTAGGGGCCTTGTCATGCAAACACTGCTTTaGGTATTTCTGATGGTTACT +
Preference number: 5 (lower is better)
Translates to: GIWLQQNRKDPKVVRGLVMQTLL*VFLMVT
Trigger: AGTAACCATCAGAAATACCAAAAGCAGTGTTTGCAT...GACAAGGCCCCTAACCACTTTGGGATCCTTTCTGTTTTGCTGCAACCATATTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp TTAGCCATTATTAGGAATGCTTTGCTGAGGAGAAATACCACTAAAATCAACACCGGAACCGGGCGTCTGTaGGTGGAAGGAGATCTTTTA +
Preference number: 5 (lower is better)
Translates to: LAIIRNALLRRNTTKINTGTGRL*VEGDLL
Trigger: TAAAAGATCTCCTTCCACCAACAGACGCCCGGTTCC...GGTGTTGATTTTAGTGGTATTTCTCCTCAGCAAAGCATTCCTAATAATGGCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CAA 90 bp TCTGAGAAGCATCACATCTTTTTCGACAAGGCCAGCACAATCACACCACATCAATCAGAATGTGATATGTaGGCTAGCTCTACATTCCCA +
Preference number: 5 (lower is better)
Translates to: SEKHHIFFDKASTITPHQSECDM*ASSTFP
Trigger: TGGGAATGTAGAGCTAGCCAACATATCACATTCTGA...TTGATGTGGTGTGATTGTGCTGGCCTTGTCGAAAAAGATGTGATGCTTCTCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CAA 90 bp GAAGATTTTACTGCCGCAGGGCAAGCCACCTATGGATTTAAAATGGGAATGAGAATGGTAGGTTTTCAGTaGACCCAGAAACCACACATA +
Preference number: 5 (lower is better)
Translates to: EDFTAAGQATYGFKMGMRMVGFQ*TQKPHI
Trigger: TATGTGTGGTTTCTGGGTCAACTGAAAACCTACCAT...TCTCATTCCCATTTTAAATCCATAGGTGGCTTGCCCTGCGGCAGTAAAATCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CAA 90 bp TGGACGCAGGACAGGAAATTAACGAGCCACGTAAATACAGAGATCTACTTAGCAATGGTAGGTTTTCAGTaGACCCAGAAACCACACATA +
Preference number: 5 (lower is better)
Translates to: WTQDRKLTSHVNTEIYLAMVGFQ*TQKPHI
Trigger: TATGTGTGGTTTCTGGGTCAACTGAAAACCTACCAT...TGCTAAGTAGATCTCTGTATTTACGTGGCTCGTTAATTTCCTGTCCTGCGTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CAA 90 bp AGCATCACATCTTTTTCGACAAGGCCAGCACAATCACACCACATCAAACAGACATTCTGCTTTCCTGCTTaGGGATGGATACATTCCTTA +
Preference number: 5 (lower is better)
Translates to: SITSFSTRPAQSHHIKQTFCFPA*GWIHSL
Trigger: TAAGGAATGTATCCATCCCAAAGCAGGAAAGCAGAA...TGTCTGTTTGATGTGGTGTGATTGTGCTGGCCTTGTCGAAAAAGATGTGATGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CAA 90 bp TGGACGCAGGACAGGAAATTAACGAGCCACGTAAATACAGAGATCTACTTAGCAATTCACTCACCTGATTaGTACCATGACCTTACTGTC +
Preference number: 5 (lower is better)
Translates to: WTQDRKLTSHVNTEIYLAIHSPD*YHDLTV
Trigger: GACAGTAAGGTCATGGTACAAATCAGGTGAGTGAAT...TGCTAAGTAGATCTCTGTATTTACGTGGCTCGTTAATTTCCTGTCCTGCGTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CAA 90 bp ATATACTGGGCCAAGTGCAAACATTTATTACATCCCCTGGTGTGTGCAGAGCTCTTTCTCATTCTCATCTaGAAGTCCTCATCAGAGTGT +
Preference number: 5 (lower is better)
Translates to: IYWAKCKHLLHPLVCAELFLILI*KSSSEC
Trigger: ACACTCTGATGAGGACTTCAAGATGAGAATGAGAAA...GAGCTCTGCACACACCAGGGGATGTAATAAATGTTTGCACTTGGCCCAGTATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CAA 90 bp TTCTGTTACAACATGTTACTACTTGATGGCGGATACTGGGGTAATGGAAGGGGACATTTGCTTAAGATGTaGGACATGTTGGTCCATCAC +
Preference number: 5 (lower is better)
Translates to: FCYNMLLLDGGYWGNGRGHLLKM*DMLVHH
Trigger: GTGATGGACCAACATGTCCAACATCTTAAGCAAATG...TCCCCTTCCATTACCCCAGTATCCGCCATCAAGTAGTAACATGTTGTAACAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS TCA 90 bp CGTGTTGCAATTTGGCATGTAGATAGAACAACCTGGAAGCTCAAATaGTGCATACTTTGCCGAGAAATATTGTCTGCAACACTGGTGTTG +
Preference number: 5 (lower is better)
Translates to: RVAIWHVDRTTWKLK*CILCREILSATLVL
Trigger: CAACACCAGTGTTGCAGACAATATTTCTCGGCAAAGTATGCATCATTTGAGCTTCCAGGTTGTTCTATCTACATGCCAAATTGCAACACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357080.8
CDS-3UTR CAA 90 bp TTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGTGGTGTCCAAACCACCTaGCACCTTGGAGTCAAAGTC +
Preference number: 5 (lower is better)
Translates to: FQLTQKPHIAIRNIIVHSGVQTT*HLGVKV
Trigger: GACTTTGACTCCAAGGTGCAAGGTGGTTTGGACACC...ACTATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp TCTGAGAAGCATCACATCTTTTTCGACAAGGCCAGCACAATCACACCACATCAATTTCATGAATCAGGTTaGACTAGAAAAGAGCAGGCA +
Preference number: 5 (lower is better)
Translates to: SEKHHIFFDKASTITPHQFHESG*TRKEQA
Trigger: TGCCTGCTCTTTTCTAGTCAAACCTGATTCATGAAA...TTGATGTGGTGTGATTGTGCTGGCCTTGTCGAAAAAGATGTGATGCTTCTCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CAA 90 bp ATCCCAAAGTGGTTAGGGGCCTTGTCTAATGCACTTCTGAAAGTCCATTATAAAAGGCACTTCTATGGGTaGGAGTGGATGTTTTATGAG +
Preference number: 5 (lower is better)
Translates to: IPKWLGALSNALLKVHYKRHFYG*EWMFYE
Trigger: CTCATAAAACATCCACTCCAACCCATAGAAGTGCCT...TTTATAATGGACTTTCAGAAGTGCATTAGACAAGGCCCCTAACCACTTTGGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp ATCCCAAAGTGGTTAGGGGCCTTGTCTAATGCACTTCTGAAAGTCCATTATAAATTTCTGGACATTGGTTaGGCCTATTTTCAGCCCTTC +
Preference number: 5 (lower is better)
Translates to: IPKWLGALSNALLKVHYKFLDIG*AYFQPF
Trigger: GAAGGGCTGAAAATAGGCCAAACCAATGTCCAGAAA...TTTATAATGGACTTTCAGAAGTGCATTAGACAAGGCCCCTAACCACTTTGGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp ATCCCAAAGTGGTTAGGGGCCTTGTCTAATGCACTTCTGAAAGTCCATTATAAATCTGGTTTCTGGACATaGGTTTGGCCTATTTTCAGC +
Preference number: 5 (lower is better)
Translates to: IPKWLGALSNALLKVHYKSGFWT*VWPIFS
Trigger: GCTGAAAATAGGCCAAACCAATGTCCAGAAACCAGA...TTTATAATGGACTTTCAGAAGTGCATTAGACAAGGCCCCTAACCACTTTGGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp AGGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCAGCCACGGAAAGCTGTTaGGTTGCATCTTTCCATCCA +
Preference number: 5 (lower is better)
Translates to: RFSVDPETTHSYKKHNCAATESC*VASFHP
Trigger: TGGATGGAAAGATGCAACCAAACAGCTTTCCGTGGC...TGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp TTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGTGAGACTGACATGGATTaGCTCACCAGCCTCATCAGG +
Preference number: 5 (lower is better)
Translates to: FQLTQKPHIAIRNIIVHSETDMD*LTSLIR
Trigger: CCTGATGAGGCTGGTGAGCAAATCCATGTCAGTCTC...ACTATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000190611.9
ENST00000392505.6
ENST00000409045.7
CDS-3UTR CAA 90 bp AGGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCAAGAGAGGAGCACCTCTaGGGCATCAAAGAACTCAGA +
Preference number: 5 (lower is better)
Translates to: RFSVDPETTHSYKKHNCAREEHL*GIKELR
Trigger: TCTGAGTTCTTTGATGCCCAAGAGGTGCTCCTCTCT...TGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp AGCATCACATCTTTTTCGACAAGGCCAGCACAATCACACCACATCAAACAGACAAGGTCTTTACCAATGTaGTTCCTCAAGATATTCCAC +
Preference number: 5 (lower is better)
Translates to: SITSFSTRPAQSHHIKQTRSLPM*FLKIFH
Trigger: GTGGAATATCTTGAGGAACAACATTGGTAAAGACCT...TGTCTGTTTGATGTGGTGTGATTGTGCTGGCCTTGTCGAAAAAGATGTGATGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CAA 90 bp TTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGTTCAGTTTCCGAAGCCTaGTCCAGGAGCTCGCTGTAT +
Preference number: 5 (lower is better)
Translates to: FQLTQKPHIAIRNIIVHSSVSEA*SRSSLY
Trigger: ATACAGCGAGCTCCTGGACAAGGCTTCGGAAACTGA...ACTATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp TGGACGCAGGACAGGAAATTAACGAGCCACGTAAATACAGAGATCTACTTAGCAAAAAAGCGGAATCCCTaGTCTTCTCTAATGCATTCA +
Preference number: 5 (lower is better)
Translates to: WTQDRKLTSHVNTEIYLAKKRNP*SSLMHS
Trigger: TGAATGCATTAGAGAAGACAAGGGATTCCGCTTTTT...TGCTAAGTAGATCTCTGTATTTACGTGGCTCGTTAATTTCCTGTCCTGCGTCCA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CAA 90 bp GGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATCTCCCACTGAGGATGTaGTGTATGCAAGTGGTGACT +
Preference number: 5 (lower is better)
Translates to: GFQLTQKPHIAIRNIIVHLPLRM*CMQVVT
Trigger: AGTCACCACTTGCATACACAACATCCTCAGTGGGAG...ATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp TTAGCCATTATTAGGAATGCTTTGCTGAGGAGAAATACCACTAAAATCAACACCACAGCTCATAGTTTGTaGGCATGGAACCTGGTCTCC +
Preference number: 5 (lower is better)
Translates to: LAIIRNALLRRNTTKINTTAHSL*AWNLVS
Trigger: GGAGACCAGGTTCCATGCCAACAAACTATGAGCTGT...GGTGTTGATTTTAGTGGTATTTCTCCTCAGCAAAGCATTCCTAATAATGGCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CAA 90 bp GGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATACAGCTCATAGTTTGTaGGCATGGAACCTGGTCTCC +
Preference number: 5 (lower is better)
Translates to: GFQLTQKPHIAIRNIIVHTAHSL*AWNLVS
Trigger: GGAGACCAGGTTCCATGCCAACAAACTATGAGCTGT...ATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp TCTGAGAAGCATCACATCTTTTTCGACAAGGCCAGCACAATCACACCACATCAAACTGGATCTAACTCATaGAGCTCAATAGCAAACCTT +
Preference number: 5 (lower is better)
Translates to: SEKHHIFFDKASTITPHQTGSNS*SSIANL
Trigger: AAGGTTTGCTATTGAGCTCAATGAGTTAGATCCAGT...TTGATGTGGTGTGATTGTGCTGGCCTTGTCGAAAAAGATGTGATGCTTCTCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CAA 90 bp TTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGTGGAACCGGGCGTCTGTaGGTGGAAGGAGATCTTTTA +
Preference number: 5 (lower is better)
Translates to: FQLTQKPHIAIRNIIVHSGTGRL*VEGDLL
Trigger: TAAAAGATCTCCTTCCACCAACAGACGCCCGGTTCC...ACTATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp GGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATTTCTTCCAAAAATCTTaGATCTGGCCGGAACCGGGC +
Preference number: 5 (lower is better)
Translates to: GFQLTQKPHIAIRNIIVHFFQKS*IWPEPG
Trigger: GCCCGGTTCCGGCCAGATCAAAGATTTTTGGAAGAA...ATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp AGGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATTCTTCCAAAAATCTTaGATCTGGCCGGAACCGGGC +
Preference number: 5 (lower is better)
Translates to: RFSVDPETTHSYKKHNCAFFQKS*IWPEPG
Trigger: GCCCGGTTCCGGCCAGATCAAAGATTTTTGGAAGAA...TGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp GGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATACAGGGCTGTCTACTTaGCTAAACCCAGGGTCCTTT +
Preference number: 5 (lower is better)
Translates to: GFQLTQKPHIAIRNIIVHTGLST*LNPGSF
Trigger: AAAGGACCCTGGGTTTAGCAAAGTAGACAGCCCTGT...ATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp AGGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCAACAGGGCTGTCTACTTaGCTAAACCCAGGGTCCTTT +
Preference number: 5 (lower is better)
Translates to: RFSVDPETTHSYKKHNCATGLST*LNPGSF
Trigger: AAAGGACCCTGGGTTTAGCAAAGTAGACAGCCCTGT...TGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp ATCAAAATATCATTTCAAGAGCAGTCATTCTGGATACCGACGGCTTTGTCAGTGAAGTGGTTAGGGGCCTaGTCTAATGCACTTCTGAAA +
Preference number: 5 (lower is better)
Translates to: IKISFQEQSFWIPTALSVKWLGA*SNALLK
Trigger: TTTCAGAAGTGCATTAGACAAGGCCCCTAACCACTT...CACTGACAAAGCCGTCGGTATCCAGAATGACTGCTCTTGAAATGATATTTTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR CAA 90 bp ATATACTGGGCCAAGTGCAAACATTTATTACATCCCCTGGTGTGTGCAGAGCTCCGTGTGGTTTCTATGTaGTTGTTAACTTTCTTGATC +
Preference number: 5 (lower is better)
Translates to: IYWAKCKHLLHPLVCAELRVVSM*LLTFLI
Trigger: GATCAAGAAAGTTAACAACAACATAGAAACCACACG...GAGCTCTGCACACACCAGGGGATGTAATAAATGTTTGCACTTGGCCCAGTATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CAA 90 bp GAAGATTTTACTGCCGCAGGGCAAGCCACCTATGGATTTAAAATGGGAATGAGATTTCTCATTCTCATCTaGAAGTCCTCATCAGAGTGT +
Preference number: 5 (lower is better)
Translates to: EDFTAAGQATYGFKMGMRFLILI*KSSSEC
Trigger: ACACTCTGATGAGGACTTCAAGATGAGAATGAGAAA...TCTCATTCCCATTTTAAATCCATAGGTGGCTTGCCCTGCGGCAGTAAAATCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CAA 90 bp ATCAAAATATCATTTCAAGAGCAGTCATTCTGGATACCGACGGCTTTGTCAGTGTGGATACCGACGGCTTaGTCAGTGAGTCTTTCATTA +
Preference number: 5 (lower is better)
Translates to: IKISFQEQSFWIPTALSVWIPTA*SVSLSL
Trigger: TAATGAAAGACTCACTGACAAAGCCGTCGGTATCCA...CACTGACAAAGCCGTCGGTATCCAGAATGACTGCTCTTGAAATGATATTTTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS GCA 90 bp TCTTCCATATATCGTCTCCGAGATCTCTGGAGTTCCTCTACTCTTTaGTTCTCTGATGCTGCAGCTTCTAAATTTCCTTCTTCCAAAAAT +
Preference number: 5 (lower is better)
Translates to: SSIYRLRDLWSSSTL*FSDAAASKFPSSKN
Trigger: ATTTTTGGAAGAAGGAAATTTAGAAGCTGCAGCATCAGAGAAGCAAAGAGTAGAGGAACTCCAGAGATCTCGGAGACGATATATGGAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000190611.9
ENST00000315022.2
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp ATCCCAAAGTGGTTAGGGGCCTTGTCTAATGCACTTCTGAAAGTCCATTATAAACTTAATATCCTTCTGTaGCTGTTTTCCCAGCAAGTG +
Preference number: 5 (lower is better)
Translates to: IPKWLGALSNALLKVHYKLNILL*LFSQQV
Trigger: CACTTGCTGGGAAAACAGCAACAGAAGGATATTAAG...TTTATAATGGACTTTCAGAAGTGCATTAGACAAGGCCCCTAACCACTTTGGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp GGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAAACCACCTTGCACCTaGGAGTCAAAGTCTTCCAAG +
Preference number: 5 (lower is better)
Translates to: GFQLTQKPHIAIRNIIVHKPPCT*ESKSSK
Trigger: CTTGGAAGACTTTGACTCCAAGGTGCAAGGTGGTTT...ATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp GGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAAAGAGCAGGCAATATaGAGGGTGTCCAAACCACCT +
Preference number: 5 (lower is better)
Translates to: GFQLTQKPHIAIRNIIVHKEQAI*RVSKPP
Trigger: AGGTGGTTTGGACACCCTCAATATTGCCTGCTCTTT...ATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp AGGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCAAAAGAGCAGGCAATATaGAGGGTGTCCAAACCACCT +
Preference number: 5 (lower is better)
Translates to: RFSVDPETTHSYKKHNCAKEQAI*RVSKPP
Trigger: AGGTGGTTTGGACACCCTCAATATTGCCTGCTCTTT...TGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp ATCCCAAAGTGGTTAGGGGCCTTGTCTAATGCACTTCTGAAAGTCCATTATAAAATAAAGCCCTCATGTTaGTCTGGTTTCTGGACATTG +
Preference number: 5 (lower is better)
Translates to: IPKWLGALSNALLKVHYKIKPSC*SGFWTL
Trigger: CAATGTCCAGAAACCAGACAAACATGAGGGCTTTAT...TTTATAATGGACTTTCAGAAGTGCATTAGACAAGGCCCCTAACCACTTTGGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp TTCTGTTACAACATGTTACTACTTGATGGCGGATACTGGGGTAATGGAAGGGGATATCGAGTGGTGCCTTaGAATACTTTAACATTCCAT +
Preference number: 5 (lower is better)
Translates to: FCYNMLLLDGGYWGNGRGYRVVP*NTLTFH
Trigger: ATGGAATGTTAAAGTATTCAAAGGCACCACTCGATA...TCCCCTTCCATTACCCCAGTATCCGCCATCAAGTAGTAACATGTTGTAACAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR CAA 90 bp TTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGTGCCACGGAAAGCTGTTaGGTTGCATCTTTCCATCCA +
Preference number: 5 (lower is better)
Translates to: FQLTQKPHIAIRNIIVHSATESC*VASFHP
Trigger: TGGATGGAAAGATGCAACCAAACAGCTTTCCGTGGC...ACTATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp AGCATCACATCTTTTTCGACAAGGCCAGCACAATCACACCACATCAAACAGACAGAAAGGAACCTGCAGTaGTATTTTTGTATCTTTGCT +
Preference number: 5 (lower is better)
Translates to: SITSFSTRPAQSHHIKQTERNLQ*YFCIFA
Trigger: AGCAAAGATACAAAAATACAACTGCAGGTTCCTTTC...TGTCTGTTTGATGTGGTGTGATTGTGCTGGCCTTGTCGAAAAAGATGTGATGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CAA 90 bp TTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGTCATTCTCTGACGAACTaGCAGAGAGGAGCACCTCTT +
Preference number: 5 (lower is better)
Translates to: FQLTQKPHIAIRNIIVHSHSLTN*QRGAPL
Trigger: AAGAGGTGCTCCTCTCTGCAAGTTCGTCAGAGAATG...ACTATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp TGGACGCAGGACAGGAAATTAACGAGCCACGTAAATACAGAGATCTACTTAGCATCTGCAACACTGGTGTaGTCTTCAGATATATTATCA +
Preference number: 5 (lower is better)
Translates to: WTQDRKLTSHVNTEIYLASATLV*SSDILS
Trigger: TGATAATATATCTGAAGACAACACCAGTGTTGCAGA...TGCTAAGTAGATCTCTGTATTTACGTGGCTCGTTAATTTCCTGTCCTGCGTCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CAA 90 bp ATCCCAAAGTGGTTAGGGGCCTTGTCTAATGCACTTCTGAAAGTCCATTATAAAATTTGCCGAGAAATATaGTCTGCAACACTGGTGTTG +
Preference number: 5 (lower is better)
Translates to: IPKWLGALSNALLKVHYKICREI*SATLVL
Trigger: CAACACCAGTGTTGCAGACAATATTTCTCGGCAAAT...TTTATAATGGACTTTCAGAAGTGCATTAGACAAGGCCCCTAACCACTTTGGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp GGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATCTCCCCATTCAGGATTaGCCGAGAAATATTGTCTGC +
Preference number: 5 (lower is better)
Translates to: GFQLTQKPHIAIRNIIVHLPIQD*PRNIVC
Trigger: GCAGACAATATTTCTCGGCAAATCCTGAATGGGGAG...ATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp TTAGCCATTATTAGGAATGCTTTGCTGAGGAGAAATACCACTAAAATCAACACCCTCCCCATTCAGGATTaGCCGAGAAATATTGTCTGC +
Preference number: 5 (lower is better)
Translates to: LAIIRNALLRRNTTKINTLPIQD*PRNIVC
Trigger: GCAGACAATATTTCTCGGCAAATCCTGAATGGGGAG...GGTGTTGATTTTAGTGGTATTTCTCCTCAGCAAAGCATTCCTAATAATGGCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CAA 90 bp TCTGAGAAGCATCACATCTTTTTCGACAAGGCCAGCACAATCACACCACATCAAAAAACACAAAATTCTTaGATTCACAGTGACAGGCAG +
Preference number: 5 (lower is better)
Translates to: SEKHHIFFDKASTITPHQKTQNS*IHSDRQ
Trigger: CTGCCTGTCACTGTGAATCAAAGAATTTTGTGTTTT...TTGATGTGGTGTGATTGTGCTGGCCTTGTCGAAAAAGATGTGATGCTTCTCAGA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CAA 90 bp TTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGTCTCCCACTGAGGATGTaGTGTATGCAAGTGGTGACT +
Preference number: 5 (lower is better)
Translates to: FQLTQKPHIAIRNIIVHSLPLRM*CMQVVT
Trigger: AGTCACCACTTGCATACACAACATCCTCAGTGGGAG...ACTATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp ATCCCAAAGTGGTTAGGGGCCTTGTCTAATGCACTTCTGAAAGTCCATTATAAAATGGTAGGTTTTCAGTaGACCCAGAAACCACACATA +
Preference number: 5 (lower is better)
Translates to: IPKWLGALSNALLKVHYKMVGFQ*TQKPHI
Trigger: TATGTGTGGTTTCTGGGTCAACTGAAAACCTACCAT...TTTATAATGGACTTTCAGAAGTGCATTAGACAAGGCCCCTAACCACTTTGGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp ATCCCAAAGTGGTTAGGGGCCTTGTCTAATGCACTTCTGAAAGTCCATTATAAATTCTGCTTTCCTGCTTaGGGATGGATACATTCCTTA +
Preference number: 5 (lower is better)
Translates to: IPKWLGALSNALLKVHYKFCFPA*GWIHSL
Trigger: TAAGGAATGTATCCATCCCAAAGCAGGAAAGCAGAA...TTTATAATGGACTTTCAGAAGTGCATTAGACAAGGCCCCTAACCACTTTGGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CAA 90 bp AGCATCACATCTTTTTCGACAAGGCCAGCACAATCACACCACATCAAACAGACAATTATTAGGAATGCTTaGCTGAGGAGAAATACCACT +
Preference number: 5 (lower is better)
Translates to: SITSFSTRPAQSHHIKQTIIRNA*LRRNTT
Trigger: AGTGGTATTTCTCCTCAGCAAAGCATTCCTAATAAT...TGTCTGTTTGATGTGGTGTGATTGTGCTGGCCTTGTCGAAAAAGATGTGATGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CAA 90 bp GAAGATTTTACTGCCGCAGGGCAAGCCACCTATGGATTTAAAATGGGAATGAGATTTTGCTATTTAGTCTaGACAGCCCAAATACTACGT +
Preference number: 5 (lower is better)
Translates to: EDFTAAGQATYGFKMGMRFCYLV*TAQILR
Trigger: ACGTAGTATTTGGGCTGTCAAGACTAAATAGCAAAA...TCTCATTCCCATTTTAAATCCATAGGTGGCTTGCCCTGCGGCAGTAAAATCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CAA 90 bp AGGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCAAAAGCAGATCAATGGTaGCCTCAGGATAGAGGATGG +
Preference number: 5 (lower is better)
Translates to: RFSVDPETTHSYKKHNCAKADQW*PQDRGW
Trigger: CCATCCTCTATCCTGAGGCAACCATTGATCTGCTTT...TGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS TCA 90 bp TCACCAGCCTCATCAGGGCTAGGAATAATATTTACACTGACAACCTaGTCACAAATAATAGACTCTGAATGTATTCTGTTCAACCGACTC +
Preference number: 5 (lower is better)
Translates to: SPASSGLGIIFTLTT*SQIIDSECILFNRL
Trigger: GAGTCGGTTGAACAGAATACATTCAGAGTCTATTATTTGTGATCAGGTTGTCAGTGTAAATATTATTCCTAGCCCTGATGAGGCTGGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000190611.9
ENST00000315022.2
ENST00000392505.6
ENST00000409045.7
CDS CCA 90 bp ATATGTTCAAGATTGTTTTCTTCCATATATCGTCTCCGAGATCTCTaGAGTTCCTCTACTCTTTGCTTCTCTGATGCTGCAGCTTCTAAA +
Preference number: 5 (lower is better)
Translates to: ICSRLFSSIYRLRDL*SSSTLCFSDAAASK
Trigger: TTTAGAAGCTGCAGCATCAGAGAAGCAAAGAGTAGAGGAACTCCAGAGATCTCGGAGACGATATATGGAAGAAAACAATCTTGAACATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000190611.9
ENST00000315022.2
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp TTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGTAAACCACCTTGCACCTaGGAGTCAAAGTCTTCCAAG +
Preference number: 5 (lower is better)
Translates to: FQLTQKPHIAIRNIIVHSKPPCT*ESKSSK
Trigger: CTTGGAAGACTTTGACTCCAAGGTGCAAGGTGGTTT...ACTATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp TTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGTAAAGAGCAGGCAATATaGAGGGTGTCCAAACCACCT +
Preference number: 5 (lower is better)
Translates to: FQLTQKPHIAIRNIIVHSKEQAI*RVSKPP
Trigger: AGGTGGTTTGGACACCCTCAATATTGCCTGCTCTTT...ACTATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp AGGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCAAGGCACTTCTATGGGTaGGAGTGGATGTTTTATGAG +
Preference number: 5 (lower is better)
Translates to: RFSVDPETTHSYKKHNCARHFYG*EWMFYE
Trigger: CTCATAAAACATCCACTCCAACCCATAGAAGTGCCT...TGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp TTAGCCATTATTAGGAATGCTTTGCTGAGGAGAAATACCACTAAAATCAACACCTTTCTGGACATTGGTTaGGCCTATTTTCAGCCCTTC +
Preference number: 5 (lower is better)
Translates to: LAIIRNALLRRNTTKINTFLDIG*AYFQPF
Trigger: GAAGGGCTGAAAATAGGCCAAACCAATGTCCAGAAA...GGTGTTGATTTTAGTGGTATTTCTCCTCAGCAAAGCATTCCTAATAATGGCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CAA 90 bp GGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATTTTCTGGACATTGGTTaGGCCTATTTTCAGCCCTTC +
Preference number: 5 (lower is better)
Translates to: GFQLTQKPHIAIRNIIVHFLDIG*AYFQPF
Trigger: GAAGGGCTGAAAATAGGCCAAACCAATGTCCAGAAA...ATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp TTAGCCATTATTAGGAATGCTTTGCTGAGGAGAAATACCACTAAAATCAACACCTCTGGTTTCTGGACATaGGTTTGGCCTATTTTCAGC +
Preference number: 5 (lower is better)
Translates to: LAIIRNALLRRNTTKINTSGFWT*VWPIFS
Trigger: GCTGAAAATAGGCCAAACCAATGTCCAGAAACCAGA...GGTGTTGATTTTAGTGGTATTTCTCCTCAGCAAAGCATTCCTAATAATGGCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CAA 90 bp ATCAAAATATCATTTCAAGAGCAGTCATTCTGGATACCGACGGCTTTGTCAGTGATTCAGCTGTGGACGTaGAAGGAAATATGTGAAAAC +
Preference number: 5 (lower is better)
Translates to: IKISFQEQSFWIPTALSVIQLWT*KEICEN
Trigger: GTTTTCACATATTTCCTTCAACGTCCACAGCTGAAT...CACTGACAAAGCCGTCGGTATCCAGAATGACTGCTCTTGAAATGATATTTTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR CAA 90 bp ATCCCAAAGTGGTTAGGGGCCTTGTCTAATGCACTTCTGAAAGTCCATTATAAAATTCAGCTGTGGACGTaGAAGGAAATATGTGAAAAC +
Preference number: 5 (lower is better)
Translates to: IPKWLGALSNALLKVHYKIQLWT*KEICEN
Trigger: GTTTTCACATATTTCCTTCAACGTCCACAGCTGAAT...TTTATAATGGACTTTCAGAAGTGCATTAGACAAGGCCCCTAACCACTTTGGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp ATTATCTGGACGCAGGACAGGAAATTAACGAGCCACGTAAATACAGAGATCTACTCTGCAACACTGGTGTaGTCTTCAGATATATTATCA +
Preference number: 5 (lower is better)
Translates to: IIWTQDRKLTSHVNTEIYSATLV*SSDILS
Trigger: TGATAATATATCTGAAGACAACACCAGTGTTGCAGA...GTAGATCTCTGTATTTACGTGGCTCGTTAATTTCCTGTCCTGCGTCCAGATAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CAA 90 bp GTATTATTTTCAGGGAAGAAGCTGACCTGGATCAAGAATGTCCTGCTAGACCTTATGCAAACACTGCTTTaGGTATTTCTGATGGTTACT +
Preference number: 5 (lower is better)
Translates to: VLFSGKKLTWIKNVLLDLMQTLL*VFLMVT
Trigger: AGTAACCATCAGAAATACCAAAAGCAGTGTTTGCAT...AAGGTCTAGCAGGACATTCTTGATCCAGGTCAGCTTCTTCCCTGAAAATAATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR CAA 90 bp ATCCCAAAGTGGTTAGGGGCCTTGTCTAATGCACTTCTGAAAGTCCATTATAAAACTGGATCTAACTCATaGAGCTCAATAGCAAACCTT +
Preference number: 5 (lower is better)
Translates to: IPKWLGALSNALLKVHYKTGSNS*SSIANL
Trigger: AAGGTTTGCTATTGAGCTCAATGAGTTAGATCCAGT...TTTATAATGGACTTTCAGAAGTGCATTAGACAAGGCCCCTAACCACTTTGGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp AGGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCAAAGTGGTTAGGGGCCTaGTCTAATGCACTTCTGAAA +
Preference number: 5 (lower is better)
Translates to: RFSVDPETTHSYKKHNCAKWLGA*SNALLK
Trigger: TTTCAGAAGTGCATTAGACAAGGCCCCTAACCACTT...TGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp AGGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCAGGAAAAGCAGCATTCTaGAGCACTGGGTGTTTCAAA +
Preference number: 5 (lower is better)
Translates to: RFSVDPETTHSYKKHNCAGKAAF*STGCFK
Trigger: TTTGAAACACCCAGTGCTCAAGAATGCTGCTTTTCC...TGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR CAA 90 bp GGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATCGTCTTGTGACCCGCTaGTCTTTCTTTGAAATATCT +
Preference number: 5 (lower is better)
Translates to: GFQLTQKPHIAIRNIIVHRLVTR*SFFEIS
Trigger: AGATATTTCAAAGAAAGACAAGCGGGTCACAAGACG...ATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409631.5
CDS-3UTR CAA 90 bp ATCAAAATATCATTTCAAGAGCAGTCATTCTGGATACCGACGGCTTTGTCAGTGGAAAGGAACCTGCAGTaGTATTTTTGTATCTTTGCT +
Preference number: 5 (lower is better)
Translates to: IKISFQEQSFWIPTALSVERNLQ*YFCIFA
Trigger: AGCAAAGATACAAAAATACAACTGCAGGTTCCTTTC...CACTGACAAAGCCGTCGGTATCCAGAATGACTGCTCTTGAAATGATATTTTGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR CAA 90 bp AGGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCAGCTTTGTATAATCTGTaGAACTTTCCAGAGGGTCAG +
Preference number: 5 (lower is better)
Translates to: RFSVDPETTHSYKKHNCAALYNL*NFPEGQ
Trigger: CTGACCCTCTGGAAAGTTCAACAGATTATACAAAGC...TGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp GGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATGCTTTGTATAATCTGTaGAACTTTCCAGAGGGTCAG +
Preference number: 5 (lower is better)
Translates to: GFQLTQKPHIAIRNIIVHALYNL*NFPEGQ
Trigger: CTGACCCTCTGGAAAGTTCAACAGATTATACAAAGC...ATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp AGGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCAATTTGCCGAGAAATATaGTCTGCAACACTGGTGTTG +
Preference number: 5 (lower is better)
Translates to: RFSVDPETTHSYKKHNCAICREI*SATLVL
Trigger: CAACACCAGTGTTGCAGACAATATTTCTCGGCAAAT...TGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp ATCCCAAAGTGGTTAGGGGCCTTGTCTAATGCACTTCTGAAAGTCCATTATAAAAAAACACAAAATTCTTaGATTCACAGTGACAGGCAG +
Preference number: 5 (lower is better)
Translates to: IPKWLGALSNALLKVHYKKTQNS*IHSDRQ
Trigger: CTGCCTGTCACTGTGAATCAAAGAATTTTGTGTTTT...TTTATAATGGACTTTCAGAAGTGCATTAGACAAGGCCCCTAACCACTTTGGGAT
39% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp AACTCAGATGCAAGGGAGGAGTTTTGGATAAATAAAATATTGCGCCATCTAGTGAACCCAGGCTTCTCTTaGATTGGCATCAATAACTTT +
Preference number: 5 (lower is better)
Translates to: NSDAREEFWINKILRHLVNPGFS*IGINNF
Trigger: AAAGTTATTGATGCCAATCAAAGAGAAGCCTGGGTT...CACTAGATGGCGCAATATTTTATTTATCCAAAACTCCTCCCTTGCATCTGAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CAA 90 bp GGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATATGGTAGGTTTTCAGTaGACCCAGAAACCACACATA +
Preference number: 5 (lower is better)
Translates to: GFQLTQKPHIAIRNIIVHMVGFQ*TQKPHI
Trigger: TATGTGTGGTTTCTGGGTCAACTGAAAACCTACCAT...ATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp GGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATATTCACTCACCTGATTaGTACCATGACCTTACTGTC +
Preference number: 5 (lower is better)
Translates to: GFQLTQKPHIAIRNIIVHIHSPD*YHDLTV
Trigger: GACAGTAAGGTCATGGTACAAATCAGGTGAGTGAAT...ATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CAA 90 bp TTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGTCTTAATATCCTTCTGTaGCTGTTTTCCCAGCAAGTG +
Preference number: 5 (lower is better)
Translates to: FQLTQKPHIAIRNIIVHSLNILL*LFSQQV
Trigger: CACTTGCTGGGAAAACAGCAACAGAAGGATATTAAG...ACTATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp GGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATTTTCATGAATCAGGTTaGACTAGAAAAGAGCAGGCA +
Preference number: 5 (lower is better)
Translates to: GFQLTQKPHIAIRNIIVHFHESG*TRKEQA
Trigger: TGCCTGCTCTTTTCTAGTCAAACCTGATTCATGAAA...ATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp TTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGTATAAAGCCCTCATGTTaGTCTGGTTTCTGGACATTG +
Preference number: 5 (lower is better)
Translates to: FQLTQKPHIAIRNIIVHSIKPSC*SGFWTL
Trigger: CAATGTCCAGAAACCAGACAAACATGAGGGCTTTAT...ACTATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp AGGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCAATTCAGCTGTGGACGTaGAAGGAAATATGTGAAAAC +
Preference number: 5 (lower is better)
Translates to: RFSVDPETTHSYKKHNCAIQLWT*KEICEN
Trigger: GTTTTCACATATTTCCTTCAACGTCCACAGCTGAAT...TGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp TTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGTGCTTTGTATAATCTGTaGAACTTTCCAGAGGGTCAG +
Preference number: 5 (lower is better)
Translates to: FQLTQKPHIAIRNIIVHSALYNL*NFPEGQ
Trigger: CTGACCCTCTGGAAAGTTCAACAGATTATACAAAGC...ACTATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp GGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGGTCTTTACCAATGTaGTTCCTCAAGATATTCCAC +
Preference number: 5 (lower is better)
Translates to: GFQLTQKPHIAIRNIIVHRSLPM*FLKIFH
Trigger: GTGGAATATCTTGAGGAACAACATTGGTAAAGACCT...ATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp AGGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCAAAAAAGCGGAATCCCTaGTCTTCTCTAATGCATTCA +
Preference number: 5 (lower is better)
Translates to: RFSVDPETTHSYKKHNCAKKRNP*SSLMHS
Trigger: TGAATGCATTAGAGAAGACAAGGGATTCCGCTTTTT...TGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACCT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp GGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATACTGGATCTAACTCATaGAGCTCAATAGCAAACCTT +
Preference number: 5 (lower is better)
Translates to: GFQLTQKPHIAIRNIIVHTGSNS*SSIANL
Trigger: AAGGTTTGCTATTGAGCTCAATGAGTTAGATCCAGT...ATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp TTAGCCATTATTAGGAATGCTTTGCTGAGGAGAAATACCACTAAAATCAACACCAACCCAGGCTTCTCTTaGATTGGCATCAATAACTTT +
Preference number: 5 (lower is better)
Translates to: LAIIRNALLRRNTTKINTNPGFS*IGINNF
Trigger: AAAGTTATTGATGCCAATCAAAGAGAAGCCTGGGTT...GGTGTTGATTTTAGTGGTATTTCTCCTCAGCAAAGCATTCCTAATAATGGCTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CAA 90 bp TTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGTTCAGAATGTGATATGTaGGCTAGCTCTACATTCCCA +
Preference number: 5 (lower is better)
Translates to: FQLTQKPHIAIRNIIVHSSECDM*ASSTFP
Trigger: TGGGAATGTAGAGCTAGCCAACATATCACATTCTGA...ACTATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp TTAGCCATTATTAGGAATGCTTTGCTGAGGAGAAATACCACTAAAATCAACACCCAAACTGGTCAGACTTaGGATTTTATATTCTGCTCC +
Preference number: 5 (lower is better)
Translates to: LAIIRNALLRRNTTKINTQTGQT*DFIFCS
Trigger: GGAGCAGAATATAAAATCCAAAGTCTGACCAGTTTG...GGTGTTGATTTTAGTGGTATTTCTCCTCAGCAAAGCATTCCTAATAATGGCTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CAA 90 bp AACTCAGATGCAAGGGAGGAGTTTTGGATAAATAAAATATTGCGCCATCTAGTGATTATTAGGAATGCTTaGCTGAGGAGAAATACCACT +
Preference number: 5 (lower is better)
Translates to: NSDAREEFWINKILRHLVIIRNA*LRRNTT
Trigger: AGTGGTATTTCTCCTCAGCAAAGCATTCCTAATAAT...CACTAGATGGCGCAATATTTTATTTATCCAAAACTCCTCCCTTGCATCTGAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CAA 90 bp AACTCAGATGCAAGGGAGGAGTTTTGGATAAATAAAATATTGCGCCATCTAGTGTTTTGCTATTTAGTCTaGACAGCCCAAATACTACGT +
Preference number: 5 (lower is better)
Translates to: NSDAREEFWINKILRHLVFCYLV*TAQILR
Trigger: ACGTAGTATTTGGGCTGTCAAGACTAAATAGCAAAA...CACTAGATGGCGCAATATTTTATTTATCCAAAACTCCTCCCTTGCATCTGAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000190611.9
ENST00000359685.7
CDS-3UTR CAA 90 bp TTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGTTTTCATGAATCAGGTTaGACTAGAAAAGAGCAGGCA +
Preference number: 5 (lower is better)
Translates to: FQLTQKPHIAIRNIIVHSFHESG*TRKEQA
Trigger: TGCCTGCTCTTTTCTAGTCAAACCTGATTCATGAAA...ACTATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp AGGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATATCGAGTGGTGCCTTaGAATACTTTAACATTCCAT +
Preference number: 5 (lower is better)
Translates to: RFSVDPETTHSYKKHNCAYRVVP*NTLTFH
Trigger: ATGGAATGTTAAAGTATTCAAAGGCACCACTCGATA...TGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp GGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATTATCGAGTGGTGCCTTaGAATACTTTAACATTCCAT +
Preference number: 5 (lower is better)
Translates to: GFQLTQKPHIAIRNIIVHYRVVP*NTLTFH
Trigger: ATGGAATGTTAAAGTATTCAAAGGCACCACTCGATA...ATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp GGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATTCTGCAACACTGGTGTaGTCTTCAGATATATTATCA +
Preference number: 5 (lower is better)
Translates to: GFQLTQKPHIAIRNIIVHSATLV*SSDILS
Trigger: TGATAATATATCTGAAGACAACACCAGTGTTGCAGA...ATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp TTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGTAGGTCTTTACCAATGTaGTTCCTCAAGATATTCCAC +
Preference number: 5 (lower is better)
Translates to: FQLTQKPHIAIRNIIVHSRSLPM*FLKIFH
Trigger: GTGGAATATCTTGAGGAACAACATTGGTAAAGACCT...ACTATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp TTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGTAAAAAGCGGAATCCCTaGTCTTCTCTAATGCATTCA +
Preference number: 5 (lower is better)
Translates to: FQLTQKPHIAIRNIIVHSKKRNP*SSLMHS
Trigger: TGAATGCATTAGAGAAGACAAGGGATTCCGCTTTTT...ACTATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp GGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAAAACACAAAATTCTTaGATTCACAGTGACAGGCAG +
Preference number: 5 (lower is better)
Translates to: GFQLTQKPHIAIRNIIVHKTQNS*IHSDRQ
Trigger: CTGCCTGTCACTGTGAATCAAAGAATTTTGTGTTTT...ATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp AGGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCAATGCAAACACTGCTTTaGGTATTTCTGATGGTTACT +
Preference number: 5 (lower is better)
Translates to: RFSVDPETTHSYKKHNCAMQTLL*VFLMVT
Trigger: AGTAACCATCAGAAATACCAAAAGCAGTGTTTGCAT...TGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp TTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGTACTGGATCTAACTCATaGAGCTCAATAGCAAACCTT +
Preference number: 5 (lower is better)
Translates to: FQLTQKPHIAIRNIIVHSTGSNS*SSIANL
Trigger: AAGGTTTGCTATTGAGCTCAATGAGTTAGATCCAGT...ACTATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp TTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGTAACCCAGGCTTCTCTTaGATTGGCATCAATAACTTT +
Preference number: 5 (lower is better)
Translates to: FQLTQKPHIAIRNIIVHSNPGFS*IGINNF
Trigger: AAAGTTATTGATGCCAATCAAAGAGAAGCCTGGGTT...ACTATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp GGTTTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATATCATGAAGCTTCATTaGCTTAAGATGTTGGACATG +
Preference number: 5 (lower is better)
Translates to: GFQLTQKPHIAIRNIIVHIMKLH*LKMLDM
Trigger: CATGTCCAACATCTTAAGCAAATGAAGCTTCATGAT...ATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAAACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR CAA 90 bp TTAGCCATTATTAGGAATGCTTTGCTGAGGAGAAATACCACTAAAATCAACACCGGTTTAGCAAAAATCTaGCCTTTTAGGTTTCAGAGT +
Preference number: 5 (lower is better)
Translates to: LAIIRNALLRRNTTKINTGLAKI*PFRFQS
Trigger: ACTCTGAAACCTAAAAGGCAAGATTTTTGCTAAACC...GGTGTTGATTTTAGTGGTATTTCTCCTCAGCAAAGCATTCCTAATAATGGCTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000190611.9
CDS-3UTR CAA 90 bp TTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGTAAAACACAAAATTCTTaGATTCACAGTGACAGGCAG +
Preference number: 5 (lower is better)
Translates to: FQLTQKPHIAIRNIIVHSKTQNS*IHSDRQ
Trigger: CTGCCTGTCACTGTGAATCAAAGAATTTTGTGTTTT...ACTATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS-3UTR CAA 90 bp TTTCAGTTGACCCAGAAACCACACATAGCTATAAGAAACATAATTGTGCATAGTATGCAAACACTGCTTTaGGTATTTCTGATGGTTACT +
Preference number: 5 (lower is better)
Translates to: FQLTQKPHIAIRNIIVHSMQTLL*VFLMVT
Trigger: AGTAACCATCAGAAATACCAAAAGCAGTGTTTGCAT...ACTATGCACAATTATGTTTCTTATAGCTATGTGTGGTTTCTGGGTCAACTGAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS CCA 72 bp TTTCCCAGCAAGTGGCAGAACCTGGAGGGCGAGCGGTaGCGCCGCGGACTCTGCGGCGGCTGCGCGGCTGCG +
Preference number: 6 (lower is better)
Translates to: FPSKWQNLEGER*RRGLCGGCAAA
Trigger: CGCAGCCGCGCAGCCGCCGCAGAGTCCGCGGCGCCACCGCTCGCCCTCCAGGTTCTGCCACTTGCTGGGAAA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000357080.8
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
CDS TCA 72 bp CTGCTGCCGCTAGCCTCTGCCGGCGCCGAGTTGTGCTaGACTGGCCCTTCGCGGGTGGCCCTTCCTGCAGTT +
Preference number: 6 (lower is better)
Translates to: LLPLASAGAELC*TGPSRVALPAV
Trigger: AACTGCAGGAAGGGCCACCCGCGAAGGGCCAGTTCAGCACAACTCGGCGCCGGCAGAGGCTAGCGGCAGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315022.2
ENST00000392505.6
CDS GCA 72 bp AAAGGAACTGTTGTAGCCACTGCTGCCGCTAGCCTCTaGCGGCGCCGAGTTGTGCTGAACTGGCCCTTCGCG +
Preference number: 6 (lower is better)
Translates to: KGTVVATAAASL*RRRVVLNWPFA
Trigger: CGCGAAGGGCCAGTTCAGCACAACTCGGCGCCGGCAGAGGCTAGCGGCAGCAGTGGCTACAACAGTTCCTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315022.2
ENST00000392505.6
CDS TCA 72 bp CGGAGCCGTGCCATCTGCGTGCTGTGGCCTTTACTGTaGTCCTGCTCGGAAACCATCTGCTTCAGCTTCTCC +
Preference number: 6 (lower is better)
Translates to: RSRAICVLWPLL*SCSETICFSFS
Trigger: GGAGAAGCTGAAGCAGATGGTTTCCGAGCAGGATCACAGTAAAGGCCACAGCACGCAGATGGCACGGCTCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000190611.9
ENST00000315022.2
ENST00000357080.8
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS GCA 72 bp TCCTTGGAGAGGGGGACTGGCTCCGGTTCTAGCAATTaGCGACTTACAGAGGGCTCGGTGCTAGAGGAAGCA +
Preference number: 6 (lower is better)
Translates to: SLERGTGSGSSN*RLTEGSVLEEA
Trigger: TGCTTCCTCTAGCACCGAGCCCTCTGTAAGTCGGCAATTGCTAGAACCGGAGCCAGTCCCCCTCTCCAAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000190611.9
ENST00000315022.2
ENST00000357080.8
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
ENST00000477097.1
CDS GCA 72 bp CCTGAGACAGTGACTGTCGGAGCCGTGCCATCTGCGTaGTGTGGCCTTTACTGTGATCCTGCTCGGAAACCA +
Preference number: 6 (lower is better)
Translates to: PETVTVGAVPSA*CGLYCDPARKP
Trigger: TGGTTTCCGAGCAGGATCACAGTAAAGGCCACAGCACGCAGATGGCACGGCTCCGACAGTCACTGTCTCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000190611.9
ENST00000315022.2
ENST00000357080.8
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS CCA 72 bp CCACAGGTTAATGTTACTGGTGTCAGGACAAGGAGCTaGCAGGCATGCTCGACGCCCATTTCGGAAGGCCCC +
Preference number: 6 (lower is better)
Translates to: PQVNVTGVRTRS*QACSTPISEGP
Trigger: GGGGCCTTCCGAAATGGGCGTCGAGCATGCCTGCCAGCTCCTTGTCCTGACACCAGTAACATTAACCTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000190611.9
ENST00000315022.2
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS GCA 72 bp AATGTTACTGGTGTCAGGACAAGGAGCTGGCAGGCATaGTCGACGCCCATTTCGGAAGGCCCCTCCTGTAAG +
Preference number: 6 (lower is better)
Translates to: NVTGVRTRSWQA*STPISEGPSCK
Trigger: CTTACAGGAGGGGCCTTCCGAAATGGGCGTCGAGCATGCCTGCCAGCTCCTTGTCCTGACACCAGTAACATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000190611.9
ENST00000315022.2
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS CAA 90 bp GCTGCCACTTTACTCTGGCCAGTTGTGCACGTTGCAGGGAGGCTATaGCTGCATGGTAAAGGGGACTGCCACGGAAAGCTGTTTGGTTGC +
Preference number: 6 (lower is better)
Translates to: AATLLWPVVHVAGRL*LHGKGDCHGKLFGC
Trigger: GCAACCAAACAGCTTTCCGTGGCAGTCCCCTTTACCATGCAGCAATAGCCTCCCTGCAACGTGCACAACTGGCCAGAGTAAAGTGGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000190611.9
ENST00000315022.2
ENST00000357080.8
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS CAA 90 bp AGTCCTGTAACCAGGCTGCCACTTTACTCTGGCCAGTTGTGCACGTaGCAGGGAGGCTATTGCTGCATGGTAAAGGGGACTGCCACGGAA +
Preference number: 6 (lower is better)
Translates to: SPVTRLPLYSGQLCT*QGGYCCMVKGTATE
Trigger: TTCCGTGGCAGTCCCCTTTACCATGCAGCAATAGCCTCCCTGCAACGTGCACAACTGGCCAGAGTAAAGTGGCAGCCTGGTTACAGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000190611.9
ENST00000315022.2
ENST00000357080.8
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS GCA 72 bp TCTGGCCAGTTGTGCACGTTGCAGGGAGGCTATTGCTaGATGGTAAAGGGGACTGCCACGGAAAGCTGTTTG +
Preference number: 6 (lower is better)
Translates to: SGQLCTLQGGYC*MVKGTATESCL
Trigger: CAAACAGCTTTCCGTGGCAGTCCCCTTTACCATGCAGCAATAGCCTCCCTGCAACGTGCACAACTGGCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000190611.9
ENST00000315022.2
ENST00000357080.8
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS GCA 72 bp TACTCTGGCCAGTTGTGCACGTTGCAGGGAGGCTATTaGTGCATGGTAAAGGGGACTGCCACGGAAAGCTGT +
Preference number: 6 (lower is better)
Translates to: YSGQLCTLQGGY*CMVKGTATESC
Trigger: ACAGCTTTCCGTGGCAGTCCCCTTTACCATGCAGCAATAGCCTCCCTGCAACGTGCACAACTGGCCAGAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000190611.9
ENST00000315022.2
ENST00000357080.8
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS CCA 72 bp TCTTCCGAGTCCTGTAACCAGGCTGCCACTTTACTCTaGCCAGTTGTGCACGTTGCAGGGAGGCTATTGCTG +
Preference number: 6 (lower is better)
Translates to: SSESCNQAATLL*PVVHVAGRLLL
Trigger: CAGCAATAGCCTCCCTGCAACGTGCACAACTGGCCAGAGTAAAGTGGCAGCCTGGTTACAGGACTCGGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000190611.9
ENST00000315022.2
ENST00000357080.8
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS CAA 72 bp TTACTCTGGCCAGTTGTGCACGTTGCAGGGAGGCTATaGCTGCATGGTAAAGGGGACTGCCACGGAAAGCTG +
Preference number: 6 (lower is better)
Translates to: LLWPVVHVAGRL*LHGKGDCHGKL
Trigger: CAGCTTTCCGTGGCAGTCCCCTTTACCATGCAGCAATAGCCTCCCTGCAACGTGCACAACTGGCCAGAGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000190611.9
ENST00000315022.2
ENST00000357080.8
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS CAA 72 bp ACCAGGCTGCCACTTTACTCTGGCCAGTTGTGCACGTaGCAGGGAGGCTATTGCTGCATGGTAAAGGGGACT +
Preference number: 6 (lower is better)
Translates to: TRLPLYSGQLCT*QGGYCCMVKGT
Trigger: AGTCCCCTTTACCATGCAGCAATAGCCTCCCTGCAACGTGCACAACTGGCCAGAGTAAAGTGGCAGCCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000190611.9
ENST00000315022.2
ENST00000357080.8
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS CAA 90 bp TCTCTTCCGAGTCCTGTAACCAGGCTGCCACTTTACTCTGGCCAGTaGTGCACGTTGCAGGGAGGCTATTGCTGCATGGTAAAGGGGACT +
Preference number: 6 (lower is better)
Translates to: SLPSPVTRLPLYSGQ*CTLQGGYCCMVKGT
Trigger: AGTCCCCTTTACCATGCAGCAATAGCCTCCCTGCAACGTGCACAACTGGCCAGAGTAAAGTGGCAGCCTGGTTACAGGACTCGGAAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000190611.9
ENST00000315022.2
ENST00000357080.8
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS GCA 72 bp CCTGTAACCAGGCTGCCACTTTACTCTGGCCAGTTGTaGACGTTGCAGGGAGGCTATTGCTGCATGGTAAAG +
Preference number: 6 (lower is better)
Translates to: PVTRLPLYSGQL*TLQGGYCCMVK
Trigger: CTTTACCATGCAGCAATAGCCTCCCTGCAACGTGCACAACTGGCCAGAGTAAAGTGGCAGCCTGGTTACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000190611.9
ENST00000315022.2
ENST00000357080.8
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS CAA 72 bp AGTCCTGTAACCAGGCTGCCACTTTACTCTGGCCAGTaGTGCACGTTGCAGGGAGGCTATTGCTGCATGGTA +
Preference number: 6 (lower is better)
Translates to: SPVTRLPLYSGQ*CTLQGGYCCMV
Trigger: TACCATGCAGCAATAGCCTCCCTGCAACGTGCACAACTGGCCAGAGTAAAGTGGCAGCCTGGTTACAGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000190611.9
ENST00000315022.2
ENST00000357080.8
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS TCA 72 bp CACTTTCCAAACAGCCGGTACACCGCCTTCCCCTCCTaGTCTATCACCACCCCCTGGACTTCATTCATGTTA +
Preference number: 6 (lower is better)
Translates to: HFPNSRYTAFPS*SITTPWTSFML
Trigger: TAACATGAATGAAGTCCAGGGGGTGGTGATAGATCAGGAGGGGAAGGCGGTGTACCGGCTGTTTGGAAAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000190611.9
ENST00000315022.2
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS GCA 72 bp GTTGCAGGGAGGCTATTGCTGCATGGTAAAGGGGACTaGCACGGAAAGCTGTTTGGTTGCATCTTTCCATCC +
Preference number: 6 (lower is better)
Translates to: VAGRLLLHGKGD*HGKLFGCIFPS
Trigger: GGATGGAAAGATGCAACCAAACAGCTTTCCGTGGCAGTCCCCTTTACCATGCAGCAATAGCCTCCCTGCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000190611.9
ENST00000315022.2
ENST00000357080.8
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS TCA 72 bp CACCTCTTGGGCATCAAAGAACTCAGAAACAGACTCTaGCATGGAGAGGCGGCTCTCATTGGCTACTTGCTG +
Preference number: 6 (lower is better)
Translates to: HLLGIKELRNRL*HGEAALIGYLL
Trigger: CAGCAAGTAGCCAATGAGAGCCGCCTCTCCATGTCAGAGTCTGTTTCTGAGTTCTTTGATGCCCAAGAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000190611.9
ENST00000315022.2
ENST00000357080.8
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS TCA 72 bp GGCTCTCATTGGCTACTTGCTGTGATAAGGGGAGACTaGCATGGATTTGCTCACCAGCCTGAGACAGTGACT +
Preference number: 6 (lower is better)
Translates to: GSHWLLAVIRGD*HGFAHQPETVT
Trigger: AGTCACTGTCTCAGGCTGGTGAGCAAATCCATGTCAGTCTCCCCTTATCACAGCAAGTAGCCAATGAGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357080.8
ENST00000359685.7
ENST00000409631.5
CDS GCA 72 bp GACTCTGACATGGAGAGGCGGCTCTCATTGGCTACTTaGTGTGATAAGGGGAGACTGACATGGATTTGCTCA +
Preference number: 6 (lower is better)
Translates to: DSDMERRLSLAT*CDKGRLTWICS
Trigger: TGAGCAAATCCATGTCAGTCTCCCCTTATCACAGCAAGTAGCCAATGAGAGCCGCCTCTCCATGTCAGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000190611.9
ENST00000315022.2
ENST00000357080.8
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS TCA 72 bp ACAAAGGTTGGGGTTGGAGGAATGCAAGCGAACTGGTaGCATGGTAGCACTGAAAGGAACTGTTGTAGCCAC +
Preference number: 6 (lower is better)
Translates to: TKVGVGGMQANW*HGSTERNCCSH
Trigger: GTGGCTACAACAGTTCCTTTCAGTGCTACCATGTCACCAGTTCGCTTGCATTCCTCCAACCCCAACCTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315022.2
ENST00000392505.6
CDS TCA 72 bp ACAAAGGTTGGGGTTGGAGGAATGCAAGCGAACTGGTaGCATGGTAGCACTGAAAGGAACCTGCATGTCAGT +
Preference number: 6 (lower is better)
Translates to: TKVGVGGMQANW*HGSTERNLHVS
Trigger: ACTGACATGCAGGTTCCTTTCAGTGCTACCATGTCACCAGTTCGCTTGCATTCCTCCAACCCCAACCTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357080.8
ENST00000409045.7
CDS CAA 90 bp TACTGTCCCTTTGGGAGGATGTTGAAGAGGAGGCACTTCTATGGGTaGGAGTGGATGTTTTATGAGCAGGGGAAATGCCCTTCTCATCTG +
Preference number: 6 (lower is better)
Translates to: YCPFGRMLKRRHFYG*EWMFYEQGKCPSHL
Trigger: CAGATGAGAAGGGCATTTCCCCTGCTCATAAAACATCCACTCCAACCCATAGAAGTGCCTCCTCTTCAACATCCTCCCAAAGGGACAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000190611.9
ENST00000357080.8
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS TCA 72 bp GAGGAGGCACTTCTATGGGTTGGAGTGGATGTTTTATaGGCAGGGGAAATGCCCTTCTCATCTGAACTCATC +
Preference number: 6 (lower is better)
Translates to: EEALLWVGVDVL*AGEMPFSSELI
Trigger: GATGAGTTCAGATGAGAAGGGCATTTCCCCTGCTCATAAAACATCCACTCCAACCCATAGAAGTGCCTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000190611.9
ENST00000357080.8
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS TCA 72 bp ACAAAGGTTGGGGTTGGAGGAATGCAAGCGAACTGGTaGCATGGTAGCACTGAAAGGAACCTGCAGTTGTAT +
Preference number: 6 (lower is better)
Translates to: TKVGVGGMQANW*HGSTERNLQLY
Trigger: ATACAACTGCAGGTTCCTTTCAGTGCTACCATGTCACCAGTTCGCTTGCATTCCTCCAACCCCAACCTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000409631.5
CDS CCA 72 bp TCATTGGCTACTTGCTGTGATAAGGGGAGACTGACATaGATTTGCTCACCAGCCTCATCAGGGCTAGGAATA +
Preference number: 6 (lower is better)
Translates to: SLATCCDKGRLT*ICSPASSGLGI
Trigger: TATTCCTAGCCCTGATGAGGCTGGTGAGCAAATCCATGTCAGTCTCCCCTTATCACAGCAAGTAGCCAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000190611.9
ENST00000315022.2
ENST00000392505.6
ENST00000409045.7
CDS CCA 72 bp CTTGGGCATCAAAGAACTCAGAAACAGACTCTGACATaGAGAGGCGGCTCTCATTGGCTACTTGCTGTGATA +
Preference number: 6 (lower is better)
Translates to: LGHQRTQKQTLT*RGGSHWLLAVI
Trigger: TATCACAGCAAGTAGCCAATGAGAGCCGCCTCTCCATGTCAGAGTCTGTTTCTGAGTTCTTTGATGCCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000190611.9
ENST00000315022.2
ENST00000357080.8
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS GCA 72 bp TATGGGTTGGAGTGGATGTTTTATGAGCAGGGGAAATaGCCTTCTCATCTGAACTCATCGCTGCAGTTAGAG +
Preference number: 6 (lower is better)
Translates to: YGLEWMFYEQGK*PSHLNSSLQLE
Trigger: CTCTAACTGCAGCGATGAGTTCAGATGAGAAGGGCATTTCCCCTGCTCATAAAACATCCACTCCAACCCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000190611.9
ENST00000357080.8
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS GCA 72 bp ACGATACAACCGATGATGTCGCAGTTTGGAGACCCATaGATCAAACCAGTCCTGGGATTTCACCTTCAAATG +
Preference number: 6 (lower is better)
Translates to: TIQPMMSQFGDP*IKPVLGFHLQM
Trigger: CATTTGAAGGTGAAATCCCAGGACTGGTTTGATGCATGGGTCTCCAAACTGCGACATCATCGGTTGTATCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000190611.9
ENST00000315022.2
ENST00000357080.8
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS CCA 72 bp AGGATGTTGAAGAGGAGGCACTTCTATGGGTTGGAGTaGATGTTTTATGAGCAGGGGAAATGCCCTTCTCAT +
Preference number: 6 (lower is better)
Translates to: RMLKRRHFYGLE*MFYEQGKCPSH
Trigger: ATGAGAAGGGCATTTCCCCTGCTCATAAAACATCCACTCCAACCCATAGAAGTGCCTCCTCTTCAACATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000190611.9
ENST00000357080.8
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS CAA 72 bp AAGACTCATCATCTGAAGCCTCATTCTCTGACGAACTaGCAGAGAGGAGCACCTCTTGGGCATCAAAGAACT +
Preference number: 6 (lower is better)
Translates to: KTHHLKPHSLTN*QRGAPLGHQRT
Trigger: AGTTCTTTGATGCCCAAGAGGTGCTCCTCTCTGCAAGTTCGTCAGAGAATGAGGCTTCAGATGATGAGTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000190611.9
ENST00000315022.2
ENST00000357080.8
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS CAA 72 bp CCAAAAATCTTTGATCTGGCCGGAACCGGGCGTCTGTaGGTGGAAGGAGATCTTTTAGTACTGGATCTAACT +
Preference number: 6 (lower is better)
Translates to: PKIFDLAGTGRL*VEGDLLVLDLT
Trigger: AGTTAGATCCAGTACTAAAAGATCTCCTTCCACCAACAGACGCCCGGTTCCGGCCAGATCAAAGATTTTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000190611.9
ENST00000315022.2
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS CAA 72 bp CATGAATCAGGTTTGACTAGAAAAGAGCAGGCAATATaGAGGGTGTCCAAACCACCTTGCACCTTGGAGTCA +
Preference number: 6 (lower is better)
Translates to: HESGLTRKEQAI*RVSKPPCTLES
Trigger: TGACTCCAAGGTGCAAGGTGGTTTGGACACCCTCAATATTGCCTGCTCTTTTCTAGTCAAACCTGATTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000190611.9
ENST00000357080.8
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS TCA 72 bp TTCCAAGTCAGCTTTATGGTCAAAGCTGTTTCACAGTaGTTTATCCTCAGATGCCTGCAGCTTTTCTCCTTG +
Preference number: 6 (lower is better)
Translates to: FQVSFMVKAVSQ*FILRCLQLFSL
Trigger: CAAGGAGAAAAGCTGCAGGCATCTGAGGATAAATCACTGTGAAACAGCTTTGACCATAAAGCTGACTTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000190611.9
ENST00000357080.8
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS CCA 72 bp AGATTGTTTTCTTCCATATATCGTCTCCGAGATCTCTaGAGTTCCTCTACTCTTTGCTTCTCTGATGCTGCA +
Preference number: 6 (lower is better)
Translates to: RLFSSIYRLRDL*SSSTLCFSDAA
Trigger: TGCAGCATCAGAGAAGCAAAGAGTAGAGGAACTCCAGAGATCTCGGAGACGATATATGGAAGAAAACAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000190611.9
ENST00000315022.2
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS CCA 72 bp TGCACCTTGGAGTCAAAGTCTTCCAAGTCAGCTTTATaGTCAAAGCTGTTTCACAGTGATTTATCCTCAGAT +
Preference number: 6 (lower is better)
Translates to: CTLESKSSKSAL*SKLFHSDLSSD
Trigger: ATCTGAGGATAAATCACTGTGAAACAGCTTTGACCATAAAGCTGACTTGGAAGACTTTGACTCCAAGGTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000190611.9
ENST00000357080.8
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS CAA 72 bp GCACTGAAAGGAACCTGCAGTTGTATTTTTGTATCTTaGCTGACACTTTTTGTTCTCCATCGTCTTGTGACC +
Preference number: 6 (lower is better)
Translates to: ALKGTCSCIFVS*LTLFVLHRLVT
Trigger: GGTCACAAGACGATGGAGAACAAAAAGTGTCAGCAAAGATACAAAAATACAACTGCAGGTTCCTTTCAGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000190611.9
ENST00000359685.7
ENST00000409631.5
CDS CAA 90 bp GTATCTTTGCTGACACTTTTTGTTCTCCATCGTCTTGTGACCCGCTaGTCTTTCTTTGAAATATCTACACAGTTAGCCTGCATGTCAGTA +
Preference number: 6 (lower is better)
Translates to: VSLLTLFVLHRLVTR*SFFEISTQLACMSV
Trigger: TACTGACATGCAGGCTAACTGTGTAGATATTTCAAAGAAAGACAAGCGGGTCACAAGACGATGGAGAACAAAAAGTGTCAGCAAAGATAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000190611.9
ENST00000315022.2
ENST00000359685.7
ENST00000392505.6
ENST00000409631.5
CDS TCA 72 bp ATTTGGCATGTAGATAGAACAACCTGGAAGCTCAAATaGTGCATACTTTGCCGAGAAATATTGTCTGCAACA +
Preference number: 6 (lower is better)
Translates to: IWHVDRTTWKLK*CILCREILSAT
Trigger: TGTTGCAGACAATATTTCTCGGCAAAGTATGCATCATTTGAGCTTCCAGGTTGTTCTATCTACATGCCAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357080.8
CDS CCA 72 bp CATTCAGGATTTGCCGAGAAATATTGTCTGCAACACTaGTGTTGTCTTCAGATATATTATCACTCACATCAC +
Preference number: 6 (lower is better)
Translates to: HSGFAEKYCLQH*CCLQIYYHSHH
Trigger: GTGATGTGAGTGATAATATATCTGAAGACAACACCAGTGTTGCAGACAATATTTCTCGGCAAATCCTGAATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000190611.9
ENST00000315022.2
ENST00000359685.7
ENST00000392505.6
ENST00000409045.7
ENST00000409631.5
CDS CCA 72 bp GATGCATACTTTGCCGAGAAATATTGTCTGCAACACTaGTGTTGTCTTCAGATATATTATCACTCACATCAC +
Preference number: 6 (lower is better)
Translates to: DAYFAEKYCLQH*CCLQIYYHSHH
Trigger: GTGATGTGAGTGATAATATATCTGAAGACAACACCAGTGTTGCAGACAATATTTCTCGGCAAAGTATGCATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357080.8
CDS TCA 72 bp TCATCAGGGCTAGGAATAATATTTACACTGACAACCTaGTCACAAATAATAGACTCTGAATGTATTCTGTTC +
Preference number: 6 (lower is better)
Translates to: SSGLGIIFTLTT*SQIIDSECILF
Trigger: GAACAGAATACATTCAGAGTCTATTATTTGTGATCAGGTTGTCAGTGTAAATATTATTCCTAGCCCTGATGA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000190611.9
ENST00000315022.2
ENST00000392505.6
ENST00000409045.7