RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OSBPL3 (Homo sapiens)

Ensembl gene IDs: ENSG00000070882

Ensembl transcript IDs: ENST00000313367.7, ENST00000396429.5, ENST00000396431.5, ENST00000409069.5, ENST00000409452.5, ENST00000409555.5, ENST00000409759.5, ENST00000409863.5, ENST00000415162.5, ENST00000415952.1, ENST00000441059.5, ENST00000459987.1, ENST00000461835.1

Found 685 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ATGTTTTCCAGCCGGGCACATCGGAACAATCAGCCAGAAGGCTTCTaGAGAAAGAGGAAGCACAAACCCACAGAACAGAACTACCCCAGG +
Preference number: 1 (lower is better)
Translates to: MFSSRAHRNNQPEGF*RKRKHKPTEQNYPR
Trigger: CCTGGGGTAGTTCTGTTCTGTGGGTTTGTGCTTCCTCTTTCTCCAGAAGCCTTCTGGCTGATTGTTCCGATGTGCCCGGCTGGAAAACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
3UTR TCA 90 bp TCATTTCTGAATGGATTTCCTGCAGCGTGGGGTAGTCGACAGCTGTaGCAGGAACATTACCTGAAGTGCAGGGTGGTTACCTGCACAAAG +
Preference number: 1 (lower is better)
Translates to: SFLNGFPAAWGSRQL*QEHYLKCRVVTCTK
Trigger: CTTTGTGCAGGTAACCACCCTGCACTTCAGGTAATGTTCCTGTCACAGCTGTCGACTACCCCACGCTGCAGGAAATCCATTCAGAAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313367.7
3UTR TCA 90 bp GAGTCATCGTCGGATTTCCTGAAAAACCGAGGCTGGTGCTCCACATaGTTTTCTTCTAAGACCCGCCGCCTTTCTCTCTGCAGTTGTTCA +
Preference number: 1 (lower is better)
Translates to: ESSSDFLKNRGWCST*FSSKTRRLSLCSCS
Trigger: TGAACAACTGCAGAGAGAAAGGCGGCGGGTCTTAGAAGAAAATCATGTGGAGCACCAGCCTCGGTTTTTCAGGAAATCCGACGATGACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
3UTR GCA 90 bp TCTTCTAAGACCCGCCGCCTTTCTCTCTGCAGTTGTTCAATCCTCTaGTTTTGTATTTCAGCTTCTTCTAAGTTCCCTTCCTCTAGAAAC +
Preference number: 1 (lower is better)
Translates to: SSKTRRLSLCSCSIL*FCISASSKFPSSRN
Trigger: GTTTCTAGAGGAAGGGAACTTAGAAGAAGCTGAAATACAAAAGCAGAGGATTGAACAACTGCAGAGAGAAAGGCGGCGGGTCTTAGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
3UTR TCA 90 bp ATGAAAATATTCTTCAGACTCCAGCACCAGCAGAATTGTTCTGTATaGGCAATTCAAGAGCTGTCTGAGGCAAAAAGATATTTCAGCTAC +
Preference number: 1 (lower is better)
Translates to: MKIFFRLQHQQNCSV*AIQELSEAKRYFSY
Trigger: GTAGCTGAAATATCTTTTTGCCTCAGACAGCTCTTGAATTGCTCATACAGAACAATTCTGCTGGTGCTGGAGTCTGAAGAATATTTTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000313367.7
3UTR TCA 90 bp GCATTCCCCAAAGTCTCTGAAAATGGTTTGCACTTTAGACTGTCATaGTTTGCAGATATTTACATGACGCAGGTTTCCAACACAGAAAAA +
Preference number: 1 (lower is better)
Translates to: AFPKVSENGLHFRLS*FADIYMTQVSNTEK
Trigger: TTTTTCTGTGTTGGAAACCTGCGTCATGTAAATATCTGCAAATCATGACAGTCTAAAGTGCAAACCATTTTCAGAGACTTTGGGGAATGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313367.7
3UTR-3UTR TCA 90 bp CCGTTGCTCACCCAAGAGTCATCGTCGGATTTCCTGAAAAACCGAGGCTGGTGCGCTAGATGCATACGCTaGTATGGCAAAGGCTGCCAC +
Preference number: 2 (lower is better)
Translates to: PLLTQESSSDFLKNRGWCARCIR*YGKGCH
Trigger: GTGGCAGCCTTTGCCATATCAGCGTATGCATCTAGC...GCACCAGCCTCGGTTTTTCAGGAAATCCGACGATGACTCTTGGGTGAGCAACGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
3UTR-3UTR TCA 90 bp CCGTTGCTCACCCAAGAGTCATCGTCGGATTTCCTGAAAAACCGAGGCTGGTGCTTTCTAGACTCAGCATaGCACGCAGAGATAGGCGGA +
Preference number: 2 (lower is better)
Translates to: PLLTQESSSDFLKNRGWCFLDSA*HAEIGG
Trigger: TCCGCCTATCTCTGCGTGTCATGCTGAGTCTAGAAA...GCACCAGCCTCGGTTTTTCAGGAAATCCGACGATGACTCTTGGGTGAGCAACGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
3UTR-3UTR GCA 90 bp GCCGTTGCTCACCCAAGAGTCATCGTCGGATTTCCTGAAAAACCGAGGCTGGTGTGCTCAATCCACCTCTaGCCGCTTAAGATGTTATGG +
Preference number: 2 (lower is better)
Translates to: AVAHPRVIVGFPEKPRLVCSIHL*PLKMLW
Trigger: CCATAACATCTTAAGCGGGCAGAGGTGGATTGAGCA...CACCAGCCTCGGTTTTTCAGGAAATCCGACGATGACTCTTGGGTGAGCAACGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
3UTR-3UTR CCA 90 bp GCCGTTGCTCACCCAAGAGTCATCGTCGGATTTCCTGAAAAACCGAGGCTGGTGACTGGCAGAGTCACATaGGTTGTGCCAATTGGAACA +
Preference number: 2 (lower is better)
Translates to: AVAHPRVIVGFPEKPRLVTGRVT*VVPIGT
Trigger: TGTTCCAATTGGCACAACCCATGTGACTCTGCCAGT...CACCAGCCTCGGTTTTTCAGGAAATCCGACGATGACTCTTGGGTGAGCAACGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
3UTR-3UTR CCA 90 bp CCGTTGCTCACCCAAGAGTCATCGTCGGATTTCCTGAAAAACCGAGGCTGGTGCACTGGCAGAGTCACATaGGTTGTGCCAATTGGAACA +
Preference number: 2 (lower is better)
Translates to: PLLTQESSSDFLKNRGWCTGRVT*VVPIGT
Trigger: TGTTCCAATTGGCACAACCCATGTGACTCTGCCAGT...GCACCAGCCTCGGTTTTTCAGGAAATCCGACGATGACTCTTGGGTGAGCAACGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
3UTR-3UTR GCA 90 bp GCCGTTGCTCACCCAAGAGTCATCGTCGGATTTCCTGAAAAACCGAGGCTGGTGTCCTGTCAAACACTGTaGCTTCAATCTCATGGGCAT +
Preference number: 2 (lower is better)
Translates to: AVAHPRVIVGFPEKPRLVSCQTL*LQSHGH
Trigger: ATGCCCATGAGATTGAAGGCACAGTGTTTGACAGGA...CACCAGCCTCGGTTTTTCAGGAAATCCGACGATGACTCTTGGGTGAGCAACGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
3UTR-3UTR CCA 90 bp CCGTTGCTCACCCAAGAGTCATCGTCGGATTTCCTGAAAAACCGAGGCTGGTGCCTGCCACATATACCCTaGATGAGAAAAACAGCTCGA +
Preference number: 2 (lower is better)
Translates to: PLLTQESSSDFLKNRGWCLPHIP*MRKTAR
Trigger: TCGAGCTGTTTTTCTCATCCAGGGTATATGTGGCAG...GCACCAGCCTCGGTTTTTCAGGAAATCCGACGATGACTCTTGGGTGAGCAACGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
3UTR-3UTR CCA 90 bp CCGTTGCTCACCCAAGAGTCATCGTCGGATTTCCTGAAAAACCGAGGCTGGTGCAAGAACCGGATTAAATaGCTTGCTTCCAGCTCGGTA +
Preference number: 2 (lower is better)
Translates to: PLLTQESSSDFLKNRGWCKNRIK*LASSSV
Trigger: TACCGAGCTGGAAGCAAGCCATTTAATCCGGTTCTT...GCACCAGCCTCGGTTTTTCAGGAAATCCGACGATGACTCTTGGGTGAGCAACGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
3UTR-3UTR TCA 90 bp CCGTTGCTCACCCAAGAGTCATCGTCGGATTTCCTGAAAAACCGAGGCTGGTGCCACATATACCCTGGATaGGAAAAACAGCTCGAGAAA +
Preference number: 2 (lower is better)
Translates to: PLLTQESSSDFLKNRGWCHIYPG*EKQLEK
Trigger: TTTCTCGAGCTGTTTTTCTCATCCAGGGTATATGTG...GCACCAGCCTCGGTTTTTCAGGAAATCCGACGATGACTCTTGGGTGAGCAACGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
3UTR-3UTR TCA 90 bp GCTCAATCCACCTCTGCCCGCTTAAGATGTTATGGATGCAAGAGGTCACTTTGTGCTAGATGCATACGCTaGTATGGCAAAGGCTGCCAC +
Preference number: 2 (lower is better)
Translates to: AQSTSARLRCYGCKRSLCARCIR*YGKGCH
Trigger: GTGGCAGCCTTTGCCATATCAGCGTATGCATCTAGC...ACAAAGTGACCTCTTGCATCCATAACATCTTAAGCGGGCAGAGGTGGATTGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
3UTR-3UTR GCA 90 bp GCCGTTGCTCACCCAAGAGTCATCGTCGGATTTCCTGAAAAACCGAGGCTGGTGGAGTCACATGGGTTGTaGCAATTGGAACAATTTCCA +
Preference number: 2 (lower is better)
Translates to: AVAHPRVIVGFPEKPRLVESHGL*QLEQFP
Trigger: TGGAAATTGTTCCAATTGGCACAACCCATGTGACTC...CACCAGCCTCGGTTTTTCAGGAAATCCGACGATGACTCTTGGGTGAGCAACGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
3UTR-3UTR CCA 90 bp CCGTTGCTCACCCAAGAGTCATCGTCGGATTTCCTGAAAAACCGAGGCTGGTGCATGCATACGCTGATATaGCAAAGGCTGCCACATATA +
Preference number: 2 (lower is better)
Translates to: PLLTQESSSDFLKNRGWCMHTLI*QRLPHI
Trigger: TATATGTGGCAGCCTTTGCCATATCAGCGTATGCAT...GCACCAGCCTCGGTTTTTCAGGAAATCCGACGATGACTCTTGGGTGAGCAACGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
3UTR-3UTR CCA 90 bp GCTCAATCCACCTCTGCCCGCTTAAGATGTTATGGATGCAAGAGGTCACTTTGTGCAGAGATAGGCGGATaGTGGCTGACCTGTTCTGAA +
Preference number: 2 (lower is better)
Translates to: AQSTSARLRCYGCKRSLCAEIGG*WLTCSE
Trigger: TTCAGAACAGGTCAGCCACCATCCGCCTATCTCTGC...ACAAAGTGACCTCTTGCATCCATAACATCTTAAGCGGGCAGAGGTGGATTGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
3UTR-3UTR GCA 90 bp GCCCTAAAGACATGTTTTCCAGCCGGGCACATCGGAACAATCAGCCAGAAGGCTATAAACACAGGTTTGTaGCACTTCAGAAGGCAAGCA +
Preference number: 2 (lower is better)
Translates to: ALKTCFPAGHIGTISQKAINTGL*HFRRQA
Trigger: TGCTTGCCTTCTGAAGTGGCACAAACCTGTGTTTAT...AGCCTTCTGGCTGATTGTTCCGATGTGCCCGGCTGGAAAACATGTCTTTAGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
3UTR-3UTR CCA 90 bp TTCCCTTCCTCTAGAAACCTCTGGTCTGGCCTAAATCGAGTGTCAGTAGGTGGCATGATCCCCAAAAACTaGCAGAGTCACATGGGTTGT +
Preference number: 2 (lower is better)
Translates to: FPSSRNLWSGLNRVSVGGMIPKN*QSHMGC
Trigger: ACAACCCATGTGACTCTGCCAGTTTTTGGGGATCAT...GCCACCTACTGACACTCGATTTAGGCCAGACCAGAGGTTTCTAGAGGAAGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
3UTR-3UTR GCA 90 bp GCCGTTGCTCACCCAAGAGTCATCGTCGGATTTCCTGAAAAACCGAGGCTGGTGCAATTTCCATGGATTTaGCCCAGAATTTGTTTTTCC +
Preference number: 2 (lower is better)
Translates to: AVAHPRVIVGFPEKPRLVQFPWI*PRICFS
Trigger: GGAAAAACAAATTCTGGGGCAAATCCATGGAAATTG...CACCAGCCTCGGTTTTTCAGGAAATCCGACGATGACTCTTGGGTGAGCAACGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
3UTR-3UTR CCA 90 bp GCTCAATCCACCTCTGCCCGCTTAAGATGTTATGGATGCAAGAGGTCACTTTGTGAGATAGGCGGATGGTaGCTGACCTGTTCTGAAAAA +
Preference number: 2 (lower is better)
Translates to: AQSTSARLRCYGCKRSLCEIGGW*LTCSEK
Trigger: TTTTTCAGAACAGGTCAGCCACCATCCGCCTATCTC...ACAAAGTGACCTCTTGCATCCATAACATCTTAAGCGGGCAGAGGTGGATTGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
3UTR-3UTR GCA 90 bp GCCGTTGCTCACCCAAGAGTCATCGTCGGATTTCCTGAAAAACCGAGGCTGGTGAGTTGTTCAATCCTCTaGTTTTGTATTTCAGCTTCT +
Preference number: 2 (lower is better)
Translates to: AVAHPRVIVGFPEKPRLVSCSIL*FCISAS
Trigger: AGAAGCTGAAATACAAAAGCAGAGGATTGAACAACT...CACCAGCCTCGGTTTTTCAGGAAATCCGACGATGACTCTTGGGTGAGCAACGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
3UTR-3UTR GCA 90 bp ACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTACGCCGCCTTTCTCTCTaGAGTTGTTCAATCCTCTGC +
Preference number: 2 (lower is better)
Translates to: TQVCATSEGKHRRNTLMLRRLSL*SCSILC
Trigger: GCAGAGGATTGAACAACTGCAGAGAGAAAGGCGGCG...TAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
3UTR-3UTR GCA 90 bp ATAGACTTAAAGAGTTACAATGCTAAGCTAAGCACAAGTGATCATCCTAGAGTAACCCCAGGCACCAAGTaGCACGGAGAAGCACCCCAA +
Preference number: 2 (lower is better)
Translates to: IDLKSYNAKLSTSDHPRVTPGTK*HGEAPQ
Trigger: TTGGGGTGCTTCTCCGTGGCACTTGGTGCCTGGGGT...TACTCTAGGATGATCACTTGTGCTTAGCTTAGCATTGTAACTCTTTAAGTCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409452.5
ENST00000409759.5
ENST00000409863.5
3UTR-3UTR GCA 90 bp ACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTACGCCGCCACAGTAGATaGTTTCATGCCATTTCCCAA +
Preference number: 2 (lower is better)
Translates to: TQVCATSEGKHRRNTLMLRRHSR*FHAISQ
Trigger: TTGGGAAATGGCATGAAAGCATCTACTGTGGCGGCG...TAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
3UTR-3UTR CCA 90 bp ACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATGGGTAGCTTACGCATaGGTGAGTAACCCTGGGAAT +
Preference number: 2 (lower is better)
Translates to: TQVCATSEGKHRRNTLMLWVAYA*VSNPGN
Trigger: ATTCCCAGGGTTACTCACCCATGCGTAAGCTACCCA...TAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313367.7
3UTR-3UTR CCA 90 bp ACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCCTCTAGAAACCTCTaGTCTGGCCTAAATCGAGTG +
Preference number: 2 (lower is better)
Translates to: TQVCATSEGKHRRNTLMLSSRNL*SGLNRV
Trigger: CACTCGATTTAGGCCAGACCAGAGGTTTCTAGAGGA...TAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
3UTR CAA 90 bp TTCTACATTTATCCTCACACTGTGGAAACTACATTTGTTTTCCCCTaGAGTGCCCTTAAATCTACAGCCTGCTTCCTCATGTCTGTGAGC +
Preference number: 2 (lower is better)
Translates to: FYIYPHTVETTFVFP*SALKSTACFLMSVS
Trigger: GCTCACAGACATGAGGAAGCAGGCTGTAGATTTAAGGGCACTCAAGGGGAAAACAAATGTAGTTTCCACAGTGTGAGGATAAATGTAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313367.7
3UTR-3UTR TCA 90 bp GCAGGAATCATCATGCAGGTTCTTGATGACAATCTCTCCATAGTGCTCAATCCACACATATACCCTGGATaGGAAAAACAGCTCGAGAAA +
Preference number: 2 (lower is better)
Translates to: AGIIMQVLDDNLSIVLNPHIYPG*EKQLEK
Trigger: TTTCTCGAGCTGTTTTTCTCATCCAGGGTATATGTG...TGGATTGAGCACTATGGAGAGATTGTCATCAAGAACCTGCATGATGATTCCTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
3UTR-3UTR GCA 90 bp GCTCAATCCACCTCTGCCCGCTTAAGATGTTATGGATGCAAGAGGTCACTTTGTCAATTTCCATGGATTTaGCCCAGAATTTGTTTTTCC +
Preference number: 2 (lower is better)
Translates to: AQSTSARLRCYGCKRSLCQFPWI*PRICFS
Trigger: GGAAAAACAAATTCTGGGGCAAATCCATGGAAATTG...ACAAAGTGACCTCTTGCATCCATAACATCTTAAGCGGGCAGAGGTGGATTGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
3UTR-3UTR CCA 90 bp TTTCACCATAAGACAGGATGGTCCAGTTTGGAAAAACCAAGATCTTTTCTAAGTGCAGAGATAGGCGGATaGTGGCTGACCTGTTCTGAA +
Preference number: 2 (lower is better)
Translates to: FHHKTGWSSLEKPRSFLSAEIGG*WLTCSE
Trigger: TTCAGAACAGGTCAGCCACCATCCGCCTATCTCTGC...ACTTAGAAAAGATCTTGGTTTTTCCAAACTGGACCATCCTGTCTTATGGTGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
3UTR-3UTR GCA 90 bp ACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTAATAAACACAGGTTTGTaGCACTTCAGAAGGCAAGCA +
Preference number: 2 (lower is better)
Translates to: TQVCATSEGKHRRNTLMLINTGL*HFRRQA
Trigger: TGCTTGCCTTCTGAAGTGGCACAAACCTGTGTTTAT...TAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
3UTR-3UTR GCA 90 bp ACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTAGAGTCACATGGGTTGTaGCAATTGGAACAATTTCCA +
Preference number: 2 (lower is better)
Translates to: TQVCATSEGKHRRNTLMLESHGL*QLEQFP
Trigger: TGGAAATTGTTCCAATTGGCACAACCCATGTGACTC...TAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
3UTR-3UTR CCA 90 bp ACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTAATGCATACGCTGATATaGCAAAGGCTGCCACATATA +
Preference number: 2 (lower is better)
Translates to: TQVCATSEGKHRRNTLMLMHTLI*QRLPHI
Trigger: TATATGTGGCAGCCTTTGCCATATCAGCGTATGCAT...TAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
3UTR-3UTR CCA 90 bp ACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTACCGCTTAAGATGTTATaGATGCAAGAGGTCACTTTG +
Preference number: 2 (lower is better)
Translates to: TQVCATSEGKHRRNTLMLPLKML*MQEVTL
Trigger: CAAAGTGACCTCTTGCATCCATAACATCTTAAGCGG...TAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
3UTR-3UTR CCA 90 bp AAATATATAAACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACTCCTCTAGAAACCTCTaGTCTGGCCTAAATCGAGTG +
Preference number: 2 (lower is better)
Translates to: KYINTGLCHFRRQAQEKYSSRNL*SGLNRV
Trigger: CACTCGATTTAGGCCAGACCAGAGGTTTCTAGAGGA...GTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGTTTATATATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
3UTR-3UTR GCA 90 bp CTTGTCCTCCCGAATACATTCATATGTTTCTCCAAGAACCGGATTAAATGGCTTATAAACACAGGTTTGTaGCACTTCAGAAGGCAAGCA +
Preference number: 2 (lower is better)
Translates to: LVLPNTFICFSKNRIKWLINTGL*HFRRQA
Trigger: TGCTTGCCTTCTGAAGTGGCACAAACCTGTGTTTAT...AAGCCATTTAATCCGGTTCTTGGAGAAACATATGAATGTATTCGGGAGGACAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
3UTR-3UTR CCA 90 bp AAATATATAAACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACAAGAACCGGATTAAATaGCTTGCTTCCAGCTCGGTA +
Preference number: 2 (lower is better)
Translates to: KYINTGLCHFRRQAQEKYKNRIK*LASSSV
Trigger: TACCGAGCTGGAAGCAAGCCATTTAATCCGGTTCTT...GTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGTTTATATATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
3UTR-3UTR CCA 90 bp ACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTAATGGGTTGTGCCAATTaGAACAATTTCCATGGATTT +
Preference number: 2 (lower is better)
Translates to: TQVCATSEGKHRRNTLMLMGCAN*NNFHGF
Trigger: AAATCCATGGAAATTGTTCCAATTGGCACAACCCAT...TAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
3UTR-3UTR CCA 90 bp AAATATATAAACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACCCGCTTAAGATGTTATaGATGCAAGAGGTCACTTTG +
Preference number: 2 (lower is better)
Translates to: KYINTGLCHFRRQAQEKYPLKML*MQEVTL
Trigger: CAAAGTGACCTCTTGCATCCATAACATCTTAAGCGG...GTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGTTTATATATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
3UTR-3UTR GCA 90 bp ATAGACTTAAAGAGTTACAATGCTAAGCTAAGCACAAGTGATCATCCTAGAGTAATAAACACAGGTTTGTaGCACTTCAGAAGGCAAGCA +
Preference number: 2 (lower is better)
Translates to: IDLKSYNAKLSTSDHPRVINTGL*HFRRQA
Trigger: TGCTTGCCTTCTGAAGTGGCACAAACCTGTGTTTAT...TACTCTAGGATGATCACTTGTGCTTAGCTTAGCATTGTAACTCTTTAAGTCTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409759.5
ENST00000409863.5
3UTR-3UTR CCA 90 bp AAATATATAAACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACTTCCTACTGTCTCTCTaGGATGCTATTGTGATATTT +
Preference number: 2 (lower is better)
Translates to: KYINTGLCHFRRQAQEKYFLLSL*DAIVIF
Trigger: AAATATCACAATAGCATCCCAGAGAGACAGTAGGAA...GTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGTTTATATATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313367.7
3UTR TCA 72 bp AATGGATTTCCTGCAGCGTGGGGTAGTCGACAGCTGTaGCAGGAACATTACCTGAAGTGCAGGGTGGTTACC +
Preference number: 3 (lower is better)
Translates to: NGFPAAWGSRQL*QEHYLKCRVVT
Trigger: GGTAACCACCCTGCACTTCAGGTAATGTTCCTGTCACAGCTGTCGACTACCCCACGCTGCAGGAAATCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313367.7
3UTR CCA 72 bp AGCCGGGCACATCGGAACAATCAGCCAGAAGGCTTCTaGAGAAAGAGGAAGCACAAACCCACAGAACAGAAC +
Preference number: 3 (lower is better)
Translates to: SRAHRNNQPEGF*RKRKHKPTEQN
Trigger: GTTCTGTTCTGTGGGTTTGTGCTTCCTCTTTCTCCAGAAGCCTTCTGGCTGATTGTTCCGATGTGCCCGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
3UTR-3UTR CAA 90 bp CCGTTGCTCACCCAAGAGTCATCGTCGGATTTCCTGAAAAACCGAGGCTGGTGCGCAGAGTCACATGGGTaGTGCCAATTGGAACAATTT +
Preference number: 3 (lower is better)
Translates to: PLLTQESSSDFLKNRGWCAESHG*CQLEQF
Trigger: AAATTGTTCCAATTGGCACAACCCATGTGACTCTGC...GCACCAGCCTCGGTTTTTCAGGAAATCCGACGATGACTCTTGGGTGAGCAACGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
3UTR TCA 72 bp TCGGATTTCCTGAAAAACCGAGGCTGGTGCTCCACATaGTTTTCTTCTAAGACCCGCCGCCTTTCTCTCTGC +
Preference number: 3 (lower is better)
Translates to: SDFLKNRGWCST*FSSKTRRLSLC
Trigger: GCAGAGAGAAAGGCGGCGGGTCTTAGAAGAAAATCATGTGGAGCACCAGCCTCGGTTTTTCAGGAAATCCGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
3UTR-3UTR CAA 90 bp TTCCCTTCCTCTAGAAACCTCTGGTCTGGCCTAAATCGAGTGTCAGTAGGTGGCCATGGGTTGTGCCAATaGGAACAATTTCCATGGATT +
Preference number: 3 (lower is better)
Translates to: FPSSRNLWSGLNRVSVGGHGLCQ*EQFPWI
Trigger: AATCCATGGAAATTGTTCCAATTGGCACAACCCATG...GCCACCTACTGACACTCGATTTAGGCCAGACCAGAGGTTTCTAGAGGAAGGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
3UTR-3UTR CAA 90 bp GCTCAATCCACCTCTGCCCGCTTAAGATGTTATGGATGCAAGAGGTCACTTTGTAAAAACTGGAAGCCCTaGTCCTCCCGAATACATTCA +
Preference number: 3 (lower is better)
Translates to: AQSTSARLRCYGCKRSLCKNWKP*SSRIHS
Trigger: TGAATGTATTCGGGAGGACAAGGGCTTCCAGTTTTT...ACAAAGTGACCTCTTGCATCCATAACATCTTAAGCGGGCAGAGGTGGATTGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
3UTR TCA 72 bp ACATCTTGCCAGAAAACAAAATTTCTAGACTCAGCATaGCACGCAGAGATAGGCGGATGGTGGCTGACCTGT +
Preference number: 3 (lower is better)
Translates to: TSCQKTKFLDSA*HAEIGGWWLTC
Trigger: ACAGGTCAGCCACCATCCGCCTATCTCTGCGTGTCATGCTGAGTCTAGAAATTTTGTTTTCTGGCAAGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
3UTR-3UTR CAA 90 bp AAGATCTTTTCTAAGTTCCAAATAGGTGCCGTTGCTCACCCAAGAGTCATCGTCTGTGAAGCTATAGTATaGCTCGTAGCCTTTCGGCAT +
Preference number: 3 (lower is better)
Translates to: KIFSKFQIGAVAHPRVIVCEAIV*LVAFRH
Trigger: ATGCCGAAAGGCTACGAGCAATACTATAGCTTCACA...GACGATGACTCTTGGGTGAGCAACGGCACCTATTTGGAACTTAGAAAAGATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
3UTR-3UTR CAA 90 bp AAGATCTTTTCTAAGTTCCAAATAGGTGCCGTTGCTCACCCAAGAGTCATCGTCTATATAAACACAGGTTaGTGCCACTTCAGAAGGCAA +
Preference number: 3 (lower is better)
Translates to: KIFSKFQIGAVAHPRVIVYINTG*CHFRRQ
Trigger: TTGCCTTCTGAAGTGGCACAAACCTGTGTTTATATA...GACGATGACTCTTGGGTGAGCAACGGCACCTATTTGGAACTTAGAAAAGATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
3UTR GCA 72 bp TTTGTTTTCCCCTTGAGTGCCCTTAAATCTACAGCCTaGTTCCTCATGTCTGTGAGCAGAATTTGGATAAAT +
Preference number: 3 (lower is better)
Translates to: FVFPLSALKSTA*FLMSVSRIWIN
Trigger: ATTTATCCAAATTCTGCTCACAGACATGAGGAAGCAGGCTGTAGATTTAAGGGCACTCAAGGGGAAAACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313367.7
3UTR-3UTR CAA 90 bp AAATATATAAACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACCCAGCACCAGCAGAATaGTTCTGTATGAGCAATTCA +
Preference number: 3 (lower is better)
Translates to: KYINTGLCHFRRQAQEKYPAPAE*FCMSNS
Trigger: TGAATTGCTCATACAGAACAATTCTGCTGGTGCTGG...GTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGTTTATATATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313367.7
3UTR-3UTR CAA 90 bp AAATATATAAACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACGCAGAGTCACATGGGTaGTGCCAATTGGAACAATTT +
Preference number: 3 (lower is better)
Translates to: KYINTGLCHFRRQAQEKYAESHG*CQLEQF
Trigger: AAATTGTTCCAATTGGCACAACCCATGTGACTCTGC...GTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGTTTATATATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
3UTR-3UTR CAA 90 bp ACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTAACAATTTCCATGGATTaGCCCCAGAATTTGTTTTTC +
Preference number: 3 (lower is better)
Translates to: TQVCATSEGKHRRNTLMLTISMD*PQNLFF
Trigger: GAAAAACAAATTCTGGGGCAAATCCATGGAAATTGT...TAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
3UTR CCA 72 bp AATACATTCATATGTTTCTCCAAGAACCGGATTAAATaGCTTGCTTCCAGCTCGGTAGTAGCTAGATGCATA +
Preference number: 3 (lower is better)
Translates to: NTFICFSKNRIK*LASSSVVARCI
Trigger: TATGCATCTAGCTACTACCGAGCTGGAAGCAAGCCATTTAATCCGGTTCTTGGAGAAACATATGAATGTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
3UTR-3UTR CAA 90 bp AAATATATAAACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACTATATAAACACAGGTTaGTGCCACTTCAGAAGGCAA +
Preference number: 3 (lower is better)
Translates to: KYINTGLCHFRRQAQEKYYINTG*CHFRRQ
Trigger: TTGCCTTCTGAAGTGGCACAAACCTGTGTTTATATA...GTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGTTTATATATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
3UTR TCA 72 bp AACATTAGGATAATTAAAGATTTTCCAAATGCCACATaGCAGTGCTACGTCCATTCAGGCTGTGCATTTTGT +
Preference number: 3 (lower is better)
Translates to: NIRIIKDFPNAT*QCYVHSGCAFC
Trigger: ACAAAATGCACAGCCTGAATGGACGTAGCACTGTCATGTGGCATTTGGAAAATCTTTAATTATCCTAATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313367.7
3UTR TCA 72 bp AAAGTCTCTGAAAATGGTTTGCACTTTAGACTGTCATaGTTTGCAGATATTTACATGACGCAGGTTTCCAAC +
Preference number: 3 (lower is better)
Translates to: KVSENGLHFRLS*FADIYMTQVSN
Trigger: GTTGGAAACCTGCGTCATGTAAATATCTGCAAATCATGACAGTCTAAAGTGCAAACCATTTTCAGAGACTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313367.7
3UTR-3UTR CAA 90 bp ATAGACTTAAAGAGTTACAATGCTAAGCTAAGCACAAGTGATCATCCTAGAGTATATATAAACACAGGTTaGTGCCACTTCAGAAGGCAA +
Preference number: 3 (lower is better)
Translates to: IDLKSYNAKLSTSDHPRVYINTG*CHFRRQ
Trigger: TTGCCTTCTGAAGTGGCACAAACCTGTGTTTATATA...TACTCTAGGATGATCACTTGTGCTTAGCTTAGCATTGTAACTCTTTAAGTCTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp CCCACAGAACAGAACTACCCCAGGCACCAAGTGCCACGGAGAAGCACCCCAACCAGGGGGCTGGGAATCTaGGCGGCCTTGTCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: PTEQNYPRHQVPRRSTPTRGLGI*AALSRS
Trigger: GCTCCTGGACAAGGCCGCGCAGATTCCCAGCCCCCT...GGTTGGGGTGCTTCTCCGTGGCACTTGGTGCCTGGGGTAGTTCTGTTCTGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp CCACAGAACAGAACTACCCCAGGCACCAAGTGCCACGGAGAAGCACCCCAACCCTCCTTTCCAGGGGGCTaGGAATCTGCGCGGCCTTGT +
Preference number: 4 (lower is better)
Translates to: PQNRTTPGTKCHGEAPQPSFPGG*ESARPC
Trigger: ACAAGGCCGCGCAGATTCCCAGCCCCCTGGAAAGGA...GGGTTGGGGTGCTTCTCCGTGGCACTTGGTGCCTGGGGTAGTTCTGTTCTGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp CCACAGAACAGAACTACCCCAGGCACCAAGTGCCACGGAGAAGCACCCCAACCCAATGGCCTCGTGGCTTaGGGACCGAGGCTGGACAGT +
Preference number: 4 (lower is better)
Translates to: PQNRTTPGTKCHGEAPQPNGLVA*GPRLDS
Trigger: ACTGTCCAGCCTCGGTCCCCAAGCCACGAGGCCATT...GGGTTGGGGTGCTTCTCCGTGGCACTTGGTGCCTGGGGTAGTTCTGTTCTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp CCACAGAACAGAACTACCCCAGGCACCAAGTGCCACGGAGAAGCACCCCAACCCGGATGTTCCACAGGCTaGTGTTACTGCTGCTCGGGC +
Preference number: 4 (lower is better)
Translates to: PQNRTTPGTKCHGEAPQPGCSTG*CYCCSG
Trigger: GCCCGAGCAGCAGTAACATCAGCCTGTGGAACATCC...GGGTTGGGGTGCTTCTCCGTGGCACTTGGTGCCTGGGGTAGTTCTGTTCTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp CACAAACCCACAGAACAGAACTACCCCAGGCACCAAGTGCCACGGAGAAGCACCCTTGGGGACCGAGGCTaGACAGTGGCAAGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: HKPTEQNYPRHQVPRRSTLGDRG*TVAREG
Trigger: GCCTTCCCTTGCCACTGTCCAGCCTCGGTCCCCAAG...GGTGCTTCTCCGTGGCACTTGGTGCCTGGGGTAGTTCTGTTCTGTGGGTTTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp CACAAACCCACAGAACAGAACTACCCCAGGCACCAAGTGCCACGGAGAAGCACCACCGAGGCTGGACAGTaGCAAGGGAAGGCTGACTCC +
Preference number: 4 (lower is better)
Translates to: HKPTEQNYPRHQVPRRSTTEAGQ*QGKADS
Trigger: GGAGTCAGCCTTCCCTTGCCACTGTCCAGCCTCGGT...GGTGCTTCTCCGTGGCACTTGGTGCCTGGGGTAGTTCTGTTCTGTGGGTTTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp GCACAAACCCACAGAACAGAACTACCCCAGGCACCAAGTGCCACGGAGAAGCACAATGGCCTCGTGGCTTaGGGACCGAGGCTGGACAGT +
Preference number: 4 (lower is better)
Translates to: AQTHRTELPQAPSATEKHNGLVA*GPRLDS
Trigger: ACTGTCCAGCCTCGGTCCCCAAGCCACGAGGCCATT...GTGCTTCTCCGTGGCACTTGGTGCCTGGGGTAGTTCTGTTCTGTGGGTTTGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp GCACAAACCCACAGAACAGAACTACCCCAGGCACCAAGTGCCACGGAGAAGCACCGTTCTTCAGACCAATaGCCTGAGCAGACGGGGAGG +
Preference number: 4 (lower is better)
Translates to: AQTHRTELPQAPSATEKHRSSDQ*PEQTGR
Trigger: CCTCCCCGTCTGCTCAGGTCATTGGTCTGAAGAACG...GTGCTTCTCCGTGGCACTTGGTGCCTGGGGTAGTTCTGTTCTGTGGGTTTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp GCACAAACCCACAGAACAGAACTACCCCAGGCACCAAGTGCCACGGAGAAGCACGGATGTTCCACAGGCTaGTGTTACTGCTGCTCGGGC +
Preference number: 4 (lower is better)
Translates to: AQTHRTELPQAPSATEKHGCSTG*CYCCSG
Trigger: GCCCGAGCAGCAGTAACATCAGCCTGTGGAACATCC...GTGCTTCTCCGTGGCACTTGGTGCCTGGGGTAGTTCTGTTCTGTGGGTTTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp TTCCCTTCCTCTAGAAACCTCTGGTCTGGCCTAAATCGAGTGTCAGTAGGTGGCAGGGGGCTGGGAATCTaGGCGGCCTTGTCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: FPSSRNLWSGLNRVSVGGRGLGI*AALSRS
Trigger: GCTCCTGGACAAGGCCGCGCAGATTCCCAGCCCCCT...GCCACCTACTGACACTCGATTTAGGCCAGACCAGAGGTTTCTAGAGGAAGGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp CCACAGAACAGAACTACCCCAGGCACCAAGTGCCACGGAGAAGCACCCCAACCCGATGGCGTTGATAGCTaGTGCCGAGTATGTCCGATG +
Preference number: 4 (lower is better)
Translates to: PQNRTTPGTKCHGEAPQPDGVDS*CRVCPM
Trigger: CATCGGACATACTCGGCACCAGCTATCAACGCCATC...GGGTTGGGGTGCTTCTCCGTGGCACTTGGTGCCTGGGGTAGTTCTGTTCTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp CCCACAGAACAGAACTACCCCAGGCACCAAGTGCCACGGAGAAGCACCCCAACCAGCAAAAATCCTTTCTaGACTGGTGGCTCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: PTEQNYPRHQVPRRSTPTSKNPF*TGGSWV
Trigger: CACCCAGGAGCCACCAGTTCAGAAAGGATTTTTGCT...GGTTGGGGTGCTTCTCCGTGGCACTTGGTGCCTGGGGTAGTTCTGTTCTGTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp GCCGTTGCTCACCCAAGAGTCATCGTCGGATTTCCTGAAAAACCGAGGCTGGTGCGTTCTTCAGACCAATaGCCTGAGCAGACGGGGAGG +
Preference number: 4 (lower is better)
Translates to: AVAHPRVIVGFPEKPRLVRSSDQ*PEQTGR
Trigger: CCTCCCCGTCTGCTCAGGTCATTGGTCTGAAGAACG...CACCAGCCTCGGTTTTTCAGGAAATCCGACGATGACTCTTGGGTGAGCAACGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp GCACAAACCCACAGAACAGAACTACCCCAGGCACCAAGTGCCACGGAGAAGCACCAAATCCTCACAAGGTaGCTGGAAACAGCCAGGCGG +
Preference number: 4 (lower is better)
Translates to: AQTHRTELPQAPSATEKHQILTR*LETARR
Trigger: CCGCCTGGCTGTTTCCAGTCACCTTGTGAGGATTTG...GTGCTTCTCCGTGGCACTTGGTGCCTGGGGTAGTTCTGTTCTGTGGGTTTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp CCACAGAACAGAACTACCCCAGGCACCAAGTGCCACGGAGAAGCACCCCAACCCCCAAATAGGTGCCGTTaGTCACCCAAGAGTCATCGT +
Preference number: 4 (lower is better)
Translates to: PQNRTTPGTKCHGEAPQPPNRCR*SPKSHR
Trigger: ACGATGACTCTTGGGTGAGCAACGGCACCTATTTGG...GGGTTGGGGTGCTTCTCCGTGGCACTTGGTGCCTGGGGTAGTTCTGTTCTGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp CACAAACCCACAGAACAGAACTACCCCAGGCACCAAGTGCCACGGAGAAGCACCTCTGGAGTTTTCGGATaGCAGGGCGTTCTTCAGACC +
Preference number: 4 (lower is better)
Translates to: HKPTEQNYPRHQVPRRSTSGVFG*QGVLQT
Trigger: GGTCTGAAGAACGCCCTGTCATCCGAAAACTCCAGA...GGTGCTTCTCCGTGGCACTTGGTGCCTGGGGTAGTTCTGTTCTGTGGGTTTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409555.5
ENST00000409759.5
CDS-3UTR TCA 90 bp CCGTTGCTCACCCAAGAGTCATCGTCGGATTTCCTGAAAAACCGAGGCTGGTGCCAAATCCTCACAAGGTaGCTGGAAACAGCCAGGCGG +
Preference number: 4 (lower is better)
Translates to: PLLTQESSSDFLKNRGWCQILTR*LETARR
Trigger: CCGCCTGGCTGTTTCCAGTCACCTTGTGAGGATTTG...GCACCAGCCTCGGTTTTTCAGGAAATCCGACGATGACTCTTGGGTGAGCAACGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp GCACAAACCCACAGAACAGAACTACCCCAGGCACCAAGTGCCACGGAGAAGCACAGAGCCCGACATCAATaGAGCCATGCAGCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: AQTHRTELPQAPSATEKHRARHQ*SHAASL
Trigger: GAGAGAAGCTGCATGGCTGCATTGATGTCGGGCTCT...GTGCTTCTCCGTGGCACTTGGTGCCTGGGGTAGTTCTGTTCTGTGGGTTTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp CCGTTGCTCACCCAAGAGTCATCGTCGGATTTCCTGAAAAACCGAGGCTGGTGCGGCGTTGATAGCTGGTaGCGAGTATGTCCGATGCAG +
Preference number: 4 (lower is better)
Translates to: PLLTQESSSDFLKNRGWCGVDSW*RVCPMQ
Trigger: CTGCATCGGACATACTCGGCACCAGCTATCAACGCC...GCACCAGCCTCGGTTTTTCAGGAAATCCGACGATGACTCTTGGGTGAGCAACGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp TTCCCTTCCTCTAGAAACCTCTGGTCTGGCCTAAATCGAGTGTCAGTAGGTGGCACCCCAGGCACCAAGTaGCACGGAGAAGCACCCCAA +
Preference number: 4 (lower is better)
Translates to: FPSSRNLWSGLNRVSVGGTPGTK*HGEAPQ
Trigger: TTGGGGTGCTTCTCCGTGGCACTTGGTGCCTGGGGT...GCCACCTACTGACACTCGATTTAGGCCAGACCAGAGGTTTCTAGAGGAAGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp CCACAGAACAGAACTACCCCAGGCACCAAGTGCCACGGAGAAGCACCCCAACCCGAGATAGGCGGATGGTaGCTGACCTGTTCTGAAAAA +
Preference number: 4 (lower is better)
Translates to: PQNRTTPGTKCHGEAPQPEIGGW*LTCSEK
Trigger: TTTTTCAGAACAGGTCAGCCACCATCCGCCTATCTC...GGGTTGGGGTGCTTCTCCGTGGCACTTGGTGCCTGGGGTAGTTCTGTTCTGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp GCACAAACCCACAGAACAGAACTACCCCAGGCACCAAGTGCCACGGAGAAGCACGCAGAGATAGGCGGATaGTGGCTGACCTGTTCTGAA +
Preference number: 4 (lower is better)
Translates to: AQTHRTELPQAPSATEKHAEIGG*WLTCSE
Trigger: TTCAGAACAGGTCAGCCACCATCCGCCTATCTCTGC...GTGCTTCTCCGTGGCACTTGGTGCCTGGGGTAGTTCTGTTCTGTGGGTTTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp TTCCCTTCCTCTAGAAACCTCTGGTCTGGCCTAAATCGAGTGTCAGTAGGTGGCAATGGCCTCGTGGCTTaGGGACCGAGGCTGGACAGT +
Preference number: 4 (lower is better)
Translates to: FPSSRNLWSGLNRVSVGGNGLVA*GPRLDS
Trigger: ACTGTCCAGCCTCGGTCCCCAAGCCACGAGGCCATT...GCCACCTACTGACACTCGATTTAGGCCAGACCAGAGGTTTCTAGAGGAAGGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp GGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTCCCGCAACGTGCAGCTaGCAGCTCCCGCACCGGCCG +
Preference number: 4 (lower is better)
Translates to: GLCHFRRQAQEKYTNVIFPATCS*QLPHRP
Trigger: CGGCCGGTGCGGGAGCTGTCAGCTGCACGTTGCGGG...AAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313367.7
CDS-3UTR TCA 90 bp GCACAAACCCACAGAACAGAACTACCCCAGGCACCAAGTGCCACGGAGAAGCACTTTCTAGACTCAGCATaGCACGCAGAGATAGGCGGA +
Preference number: 4 (lower is better)
Translates to: AQTHRTELPQAPSATEKHFLDSA*HAEIGG
Trigger: TCCGCCTATCTCTGCGTGTCATGCTGAGTCTAGAAA...GTGCTTCTCCGTGGCACTTGGTGCCTGGGGTAGTTCTGTTCTGTGGGTTTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp CCGTTGCTCACCCAAGAGTCATCGTCGGATTTCCTGAAAAACCGAGGCTGGTGCGGCTGGTGCTCCACATaGTTTTCTTCTAAGACCCGC +
Preference number: 4 (lower is better)
Translates to: PLLTQESSSDFLKNRGWCGWCST*FSSKTR
Trigger: GCGGGTCTTAGAAGAAAATCATGTGGAGCACCAGCC...GCACCAGCCTCGGTTTTTCAGGAAATCCGACGATGACTCTTGGGTGAGCAACGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp CACAAACCCACAGAACAGAACTACCCCAGGCACCAAGTGCCACGGAGAAGCACCACGGAACAATCAAAATaGAACCGGAGGGAACAGGGG +
Preference number: 4 (lower is better)
Translates to: HKPTEQNYPRHQVPRRSTTEQSK*NRREQG
Trigger: CCCCTGTTCCCTCCGGTTTCATTTTGATTGTTCCGT...GGTGCTTCTCCGTGGCACTTGGTGCCTGGGGTAGTTCTGTTCTGTGGGTTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp GCCCTAAAGACATGTTTTCCAGCCGGGCACATCGGAACAATCAGCCAGAAGGCTGCCGAGTATGTCCGATaGAGGACGTCCATGCTTTGC +
Preference number: 4 (lower is better)
Translates to: ALKTCFPAGHIGTISQKAAEYVR*RTSMLC
Trigger: GCAAAGCATGGACGTCCTGCATCGGACATACTCGGC...AGCCTTCTGGCTGATTGTTCCGATGTGCCCGGCTGGAAAACATGTCTTTAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp GCCCTAAAGACATGTTTTCCAGCCGGGCACATCGGAACAATCAGCCAGAAGGCTGGCGTTGATAGCTGGTaGCGAGTATGTCCGATGCAG +
Preference number: 4 (lower is better)
Translates to: ALKTCFPAGHIGTISQKAGVDSW*RVCPMQ
Trigger: CTGCATCGGACATACTCGGCACCAGCTATCAACGCC...AGCCTTCTGGCTGATTGTTCCGATGTGCCCGGCTGGAAAACATGTCTTTAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp AAACTGGAAGCCCTTGTCCTCCCGAATACATTCATATGTTTCTCCAAGAACCGGAGGGGGCTGGGAATCTaGGCGGCCTTGTCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: KLEALVLPNTFICFSKNRRGLGI*AALSRS
Trigger: GCTCCTGGACAAGGCCGCGCAGATTCCCAGCCCCCT...CCGGTTCTTGGAGAAACATATGAATGTATTCGGGAGGACAAGGGCTTCCAGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp CCGTTGCTCACCCAAGAGTCATCGTCGGATTTCCTGAAAAACCGAGGCTGGTGCCGCCGCCTTTCTCTCTaGAGTTGTTCAATCCTCTGC +
Preference number: 4 (lower is better)
Translates to: PLLTQESSSDFLKNRGWCRRLSL*SCSILC
Trigger: GCAGAGGATTGAACAACTGCAGAGAGAAAGGCGGCG...GCACCAGCCTCGGTTTTTCAGGAAATCCGACGATGACTCTTGGGTGAGCAACGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp CACAAACCCACAGAACAGAACTACCCCAGGCACCAAGTGCCACGGAGAAGCACCCCAAATAGGTGCCGTTaGTCACCCAAGAGTCATCGT +
Preference number: 4 (lower is better)
Translates to: HKPTEQNYPRHQVPRRSTPNRCR*SPKSHR
Trigger: ACGATGACTCTTGGGTGAGCAACGGCACCTATTTGG...GGTGCTTCTCCGTGGCACTTGGTGCCTGGGGTAGTTCTGTTCTGTGGGTTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp GCACAAACCCACAGAACAGAACTACCCCAGGCACCAAGTGCCACGGAGAAGCACGTCGACTTCCTTGCTTaGAAGAGCAGCTACTTGTGC +
Preference number: 4 (lower is better)
Translates to: AQTHRTELPQAPSATEKHVDFLA*KSSYLC
Trigger: GCACAAGTAGCTGCTCTTCCAAGCAAGGAAGTCGAC...GTGCTTCTCCGTGGCACTTGGTGCCTGGGGTAGTTCTGTTCTGTGGGTTTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp CCACAGAACAGAACTACCCCAGGCACCAAGTGCCACGGAGAAGCACCCCAACCCGCTTCCTACTTGAAATaGAGTCAAACACCCCAGATG +
Preference number: 4 (lower is better)
Translates to: PQNRTTPGTKCHGEAPQPASYLK*SQTPQM
Trigger: CATCTGGGGTGTTTGACTCCATTTCAAGTAGGAAGC...GGGTTGGGGTGCTTCTCCGTGGCACTTGGTGCCTGGGGTAGTTCTGTTCTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp CCGTTGCTCACCCAAGAGTCATCGTCGGATTTCCTGAAAAACCGAGGCTGGTGCGATGGCGTTGATAGCTaGTGCCGAGTATGTCCGATG +
Preference number: 4 (lower is better)
Translates to: PLLTQESSSDFLKNRGWCDGVDS*CRVCPM
Trigger: CATCGGACATACTCGGCACCAGCTATCAACGCCATC...GCACCAGCCTCGGTTTTTCAGGAAATCCGACGATGACTCTTGGGTGAGCAACGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp CCCACAGAACAGAACTACCCCAGGCACCAAGTGCCACGGAGAAGCACCCCAACCATGATCCCCAAAAACTaGCAGAGTCACATGGGTTGT +
Preference number: 4 (lower is better)
Translates to: PTEQNYPRHQVPRRSTPTMIPKN*QSHMGC
Trigger: ACAACCCATGTGACTCTGCCAGTTTTTGGGGATCAT...GGTTGGGGTGCTTCTCCGTGGCACTTGGTGCCTGGGGTAGTTCTGTTCTGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp CCACAGAACAGAACTACCCCAGGCACCAAGTGCCACGGAGAAGCACCCCAACCCCTGCCACATATACCCTaGATGAGAAAAACAGCTCGA +
Preference number: 4 (lower is better)
Translates to: PQNRTTPGTKCHGEAPQPLPHIP*MRKTAR
Trigger: TCGAGCTGTTTTTCTCATCCAGGGTATATGTGGCAG...GGGTTGGGGTGCTTCTCCGTGGCACTTGGTGCCTGGGGTAGTTCTGTTCTGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp CACAAACCCACAGAACAGAACTACCCCAGGCACCAAGTGCCACGGAGAAGCACCCAGATGAAGAGTCTGTaGTGGTGGACCCTGAGAAAA +
Preference number: 4 (lower is better)
Translates to: HKPTEQNYPRHQVPRRSTQMKSL*WWTLRK
Trigger: TTTTCTCAGGGTCCACCATCACAGACTCTTCATCTG...GGTGCTTCTCCGTGGCACTTGGTGCCTGGGGTAGTTCTGTTCTGTGGGTTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp GCCCTAAAGACATGTTTTCCAGCCGGGCACATCGGAACAATCAGCCAGAAGGCTGCTAGATGCATACGCTaGTATGGCAAAGGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: ALKTCFPAGHIGTISQKAARCIR*YGKGCH
Trigger: GTGGCAGCCTTTGCCATATCAGCGTATGCATCTAGC...AGCCTTCTGGCTGATTGTTCCGATGTGCCCGGCTGGAAAACATGTCTTTAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp GCACAAACCCACAGAACAGAACTACCCCAGGCACCAAGTGCCACGGAGAAGCACCCAGCGCAAACTGTGTaGAGCTATAGTATTGCTCGT +
Preference number: 4 (lower is better)
Translates to: AQTHRTELPQAPSATEKHPAQTV*SYSIAR
Trigger: ACGAGCAATACTATAGCTTCACACAGTTTGCGCTGG...GTGCTTCTCCGTGGCACTTGGTGCCTGGGGTAGTTCTGTTCTGTGGGTTTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp GCACAAACCCACAGAACAGAACTACCCCAGGCACCAAGTGCCACGGAGAAGCACTCCTGTCGACTTCCTTaGTTGGAAGAGCAGCTACTT +
Preference number: 4 (lower is better)
Translates to: AQTHRTELPQAPSATEKHSCRLP*LEEQLL
Trigger: AAGTAGCTGCTCTTCCAAGCAAGGAAGTCGACAGGA...GTGCTTCTCCGTGGCACTTGGTGCCTGGGGTAGTTCTGTTCTGTGGGTTTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp CCCACAGAACAGAACTACCCCAGGCACCAAGTGCCACGGAGAAGCACCCCAACCATGCATACGCTGATATaGCAAAGGCTGCCACATATA +
Preference number: 4 (lower is better)
Translates to: PTEQNYPRHQVPRRSTPTMHTLI*QRLPHI
Trigger: TATATGTGGCAGCCTTTGCCATATCAGCGTATGCAT...GGTTGGGGTGCTTCTCCGTGGCACTTGGTGCCTGGGGTAGTTCTGTTCTGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp CCACAGAACAGAACTACCCCAGGCACCAAGTGCCACGGAGAAGCACCCCAACCCATGCATACGCTGATATaGCAAAGGCTGCCACATATA +
Preference number: 4 (lower is better)
Translates to: PQNRTTPGTKCHGEAPQPMHTLI*QRLPHI
Trigger: TATATGTGGCAGCCTTTGCCATATCAGCGTATGCAT...GGGTTGGGGTGCTTCTCCGTGGCACTTGGTGCCTGGGGTAGTTCTGTTCTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp CACAAACCCACAGAACAGAACTACCCCAGGCACCAAGTGCCACGGAGAAGCACCGAGATAGGCGGATGGTaGCTGACCTGTTCTGAAAAA +
Preference number: 4 (lower is better)
Translates to: HKPTEQNYPRHQVPRRSTEIGGW*LTCSEK
Trigger: TTTTTCAGAACAGGTCAGCCACCATCCGCCTATCTC...GGTGCTTCTCCGTGGCACTTGGTGCCTGGGGTAGTTCTGTTCTGTGGGTTTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp CCACAGAACAGAACTACCCCAGGCACCAAGTGCCACGGAGAAGCACCCCAACCCCACCATAAGACAGGATaGTCCAGTTTGGAAAAACCA +
Preference number: 4 (lower is better)
Translates to: PQNRTTPGTKCHGEAPQPHHKTG*SSLEKP
Trigger: TGGTTTTTCCAAACTGGACCATCCTGTCTTATGGTG...GGGTTGGGGTGCTTCTCCGTGGCACTTGGTGCCTGGGGTAGTTCTGTTCTGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp CCCACAGAACAGAACTACCCCAGGCACCAAGTGCCACGGAGAAGCACCCCAACCCACCATAAGACAGGATaGTCCAGTTTGGAAAAACCA +
Preference number: 4 (lower is better)
Translates to: PTEQNYPRHQVPRRSTPTHHKTG*SSLEKP
Trigger: TGGTTTTTCCAAACTGGACCATCCTGTCTTATGGTG...GGTTGGGGTGCTTCTCCGTGGCACTTGGTGCCTGGGGTAGTTCTGTTCTGTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp GCTCAATCCACCTCTGCCCGCTTAAGATGTTATGGATGCAAGAGGTCACTTTGTACCGAGGCTGGACAGTaGCAAGGGAAGGCTGACTCC +
Preference number: 4 (lower is better)
Translates to: AQSTSARLRCYGCKRSLCTEAGQ*QGKADS
Trigger: GGAGTCAGCCTTCCCTTGCCACTGTCCAGCCTCGGT...ACAAAGTGACCTCTTGCATCCATAACATCTTAAGCGGGCAGAGGTGGATTGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp AAACTGGAAGCCCTTGTCCTCCCGAATACATTCATATGTTTCTCCAAGAACCGGCTTGGGGACCGAGGCTaGACAGTGGCAAGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: KLEALVLPNTFICFSKNRLGDRG*TVAREG
Trigger: GCCTTCCCTTGCCACTGTCCAGCCTCGGTCCCCAAG...CCGGTTCTTGGAGAAACATATGAATGTATTCGGGAGGACAAGGGCTTCCAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp GCCGTTGCTCACCCAAGAGTCATCGTCGGATTTCCTGAAAAACCGAGGCTGGTGCTTTACAGACATCACTaGGAGCCCGACATCAATGCA +
Preference number: 4 (lower is better)
Translates to: AVAHPRVIVGFPEKPRLVLYRHH*EPDINA
Trigger: TGCATTGATGTCGGGCTCTCAGTGATGTCTGTAAAG...CACCAGCCTCGGTTTTTCAGGAAATCCGACGATGACTCTTGGGTGAGCAACGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp CCCACAGAACAGAACTACCCCAGGCACCAAGTGCCACGGAGAAGCACCCCAACCATCAAAGACTTCTTCTaGCTTGACCTTCAGATGGTA +
Preference number: 4 (lower is better)
Translates to: PTEQNYPRHQVPRRSTPTIKDFF*LDLQMV
Trigger: TACCATCTGAAGGTCAAGTCAGAAGAAGTCTTTGAT...GGTTGGGGTGCTTCTCCGTGGCACTTGGTGCCTGGGGTAGTTCTGTTCTGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp GCCCTAAAGACATGTTTTCCAGCCGGGCACATCGGAACAATCAGCCAGAAGGCTGTCAAACACCCCAGATaGAGAGTCTGTGATGGTGGA +
Preference number: 4 (lower is better)
Translates to: ALKTCFPAGHIGTISQKAVKHPR*RVCDGG
Trigger: TCCACCATCACAGACTCTTCATCTGGGGTGTTTGAC...AGCCTTCTGGCTGATTGTTCCGATGTGCCCGGCTGGAAAACATGTCTTTAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp CACAAACCCACAGAACAGAACTACCCCAGGCACCAAGTGCCACGGAGAAGCACCCAGAAAGGGAGTCAGTaGTGGAGAGTCTACTTTCAT +
Preference number: 4 (lower is better)
Translates to: HKPTEQNYPRHQVPRRSTQKGSQ*WRVYFH
Trigger: ATGAAAGTAGACTCTCCATCACTGACTCCCTTTCTG...GGTGCTTCTCCGTGGCACTTGGTGCCTGGGGTAGTTCTGTTCTGTGGGTTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp GCCGTTGCTCACCCAAGAGTCATCGTCGGATTTCCTGAAAAACCGAGGCTGGTGCCAGCGCAAACTGTGTaGAGCTATAGTATTGCTCGT +
Preference number: 4 (lower is better)
Translates to: AVAHPRVIVGFPEKPRLVPAQTV*SYSIAR
Trigger: ACGAGCAATACTATAGCTTCACACAGTTTGCGCTGG...CACCAGCCTCGGTTTTTCAGGAAATCCGACGATGACTCTTGGGTGAGCAACGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp GCCGTTGCTCACCCAAGAGTCATCGTCGGATTTCCTGAAAAACCGAGGCTGGTGGAAGCCAGACAGCTCTaGGTAATGAACCTGTTTACG +
Preference number: 4 (lower is better)
Translates to: AVAHPRVIVGFPEKPRLVEARQL*VMNLFT
Trigger: CGTAAACAGGTTCATTACTCAGAGCTGTCTGGCTTC...CACCAGCCTCGGTTTTTCAGGAAATCCGACGATGACTCTTGGGTGAGCAACGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp CACAAACCCACAGAACAGAACTACCCCAGGCACCAAGTGCCACGGAGAAGCACCAAGAGCAGCTACTTGTaGTCCTTGAAGGTGATACCA +
Preference number: 4 (lower is better)
Translates to: HKPTEQNYPRHQVPRRSTKSSYL*SLKVIP
Trigger: TGGTATCACCTTCAAGGAGCACAAGTAGCTGCTCTT...GGTGCTTCTCCGTGGCACTTGGTGCCTGGGGTAGTTCTGTTCTGTGGGTTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp GCACAAACCCACAGAACAGAACTACCCCAGGCACCAAGTGCCACGGAGAAGCACAAGAGCAGCTACTTGTaGTCCTTGAAGGTGATACCA +
Preference number: 4 (lower is better)
Translates to: AQTHRTELPQAPSATEKHKSSYL*SLKVIP
Trigger: TGGTATCACCTTCAAGGAGCACAAGTAGCTGCTCTT...GTGCTTCTCCGTGGCACTTGGTGCCTGGGGTAGTTCTGTTCTGTGGGTTTGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp TTCCCTTCCTCTAGAAACCTCTGGTCTGGCCTAAATCGAGTGTCAGTAGGTGGCAGAGCCCGACATCAATaGAGCCATGCAGCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: FPSSRNLWSGLNRVSVGGRARHQ*SHAASL
Trigger: GAGAGAAGCTGCATGGCTGCATTGATGTCGGGCTCT...GCCACCTACTGACACTCGATTTAGGCCAGACCAGAGGTTTCTAGAGGAAGGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp GCCCTAAAGACATGTTTTCCAGCCGGGCACATCGGAACAATCAGCCAGAAGGCTTCCTGCTCCATCAGCTaGTTCAGTTTCTCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: ALKTCFPAGHIGTISQKASCSIS*FSFSLS
Trigger: GGAGAGAGAGAAACTGAAGCAGCTGATGGAGCAGGA...AGCCTTCTGGCTGATTGTTCCGATGTGCCCGGCTGGAAAACATGTCTTTAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp TTCTGTCCACCCAGGGAAGTAAAAATAAACATGCAGACAGCCCTAAAGACATGTAGGGGGCTGGGAATCTaGGCGGCCTTGTCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: FCPPREVKINMQTALKTCRGLGI*AALSRS
Trigger: GCTCCTGGACAAGGCCGCGCAGATTCCCAGCCCCCT...ACATGTCTTTAGGGCTGTCTGCATGTTTATTTTTACTTCCCTGGGTGGACAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp GCCCTAAAGACATGTTTTCCAGCCGGGCACATCGGAACAATCAGCCAGAAGGCTGTCGACTTCCTTGCTTaGAAGAGCAGCTACTTGTGC +
Preference number: 4 (lower is better)
Translates to: ALKTCFPAGHIGTISQKAVDFLA*KSSYLC
Trigger: GCACAAGTAGCTGCTCTTCCAAGCAAGGAAGTCGAC...AGCCTTCTGGCTGATTGTTCCGATGTGCCCGGCTGGAAAACATGTCTTTAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp GCCGTTGCTCACCCAAGAGTCATCGTCGGATTTCCTGAAAAACCGAGGCTGGTGCGATACATTCTGTGGTaGCGAAGTTTCGATACCCAC +
Preference number: 4 (lower is better)
Translates to: AVAHPRVIVGFPEKPRLVRYILW*RSFDTH
Trigger: GTGGGTATCGAAACTTCGCCACCACAGAATGTATCG...CACCAGCCTCGGTTTTTCAGGAAATCCGACGATGACTCTTGGGTGAGCAACGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp GCACAAACCCACAGAACAGAACTACCCCAGGCACCAAGTGCCACGGAGAAGCACGCTTCCTACTTGAAATaGAGTCAAACACCCCAGATG +
Preference number: 4 (lower is better)
Translates to: AQTHRTELPQAPSATEKHASYLK*SQTPQM
Trigger: CATCTGGGGTGTTTGACTCCATTTCAAGTAGGAAGC...GTGCTTCTCCGTGGCACTTGGTGCCTGGGGTAGTTCTGTTCTGTGGGTTTGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp GCCCTAAAGACATGTTTTCCAGCCGGGCACATCGGAACAATCAGCCAGAAGGCTAGCAGAGACTCGGCATaGATTCTGCGTAAGCGTTCT +
Preference number: 4 (lower is better)
Translates to: ALKTCFPAGHIGTISQKASRDSA*ILRKRS
Trigger: AGAACGCTTACGCAGAATCCATGCCGAGTCTCTGCT...AGCCTTCTGGCTGATTGTTCCGATGTGCCCGGCTGGAAAACATGTCTTTAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409452.5
ENST00000409863.5
CDS-3UTR CCA 90 bp GCACAAACCCACAGAACAGAACTACCCCAGGCACCAAGTGCCACGGAGAAGCACATGATCCCCAAAAACTaGCAGAGTCACATGGGTTGT +
Preference number: 4 (lower is better)
Translates to: AQTHRTELPQAPSATEKHMIPKN*QSHMGC
Trigger: ACAACCCATGTGACTCTGCCAGTTTTTGGGGATCAT...GTGCTTCTCCGTGGCACTTGGTGCCTGGGGTAGTTCTGTTCTGTGGGTTTGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp GCCGTTGCTCACCCAAGAGTCATCGTCGGATTTCCTGAAAAACCGAGGCTGGTGCTCGGTTTTCATCTCTaGAGTTTTCGGATGACAGGG +
Preference number: 4 (lower is better)
Translates to: AVAHPRVIVGFPEKPRLVLGFHL*SFRMTG
Trigger: CCCTGTCATCCGAAAACTCCAGAGATGAAAACCGAG...CACCAGCCTCGGTTTTTCAGGAAATCCGACGATGACTCTTGGGTGAGCAACGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000409555.5
ENST00000409759.5
CDS-3UTR CCA 90 bp GCAGGAATCATCATGCAGGTTCTTGATGACAATCTCTCCATAGTGCTCAATCCACTTGGGGACCGAGGCTaGACAGTGGCAAGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: AGIIMQVLDDNLSIVLNPLGDRG*TVAREG
Trigger: GCCTTCCCTTGCCACTGTCCAGCCTCGGTCCCCAAG...TGGATTGAGCACTATGGAGAGATTGTCATCAAGAACCTGCATGATGATTCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp AAACTGGAAGCCCTTGTCCTCCCGAATACATTCATATGTTTCTCCAAGAACCGGAATGGCCTCGTGGCTTaGGGACCGAGGCTGGACAGT +
Preference number: 4 (lower is better)
Translates to: KLEALVLPNTFICFSKNRNGLVA*GPRLDS
Trigger: ACTGTCCAGCCTCGGTCCCCAAGCCACGAGGCCATT...CCGGTTCTTGGAGAAACATATGAATGTATTCGGGAGGACAAGGGCTTCCAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp TTCTGTCCACCCAGGGAAGTAAAAATAAACATGCAGACAGCCCTAAAGACATGTGATGGGCCCCGTGAATaGCCTCGTGGCTTGGGGACC +
Preference number: 4 (lower is better)
Translates to: FCPPREVKINMQTALKTCDGPRE*PRGLGT
Trigger: GGTCCCCAAGCCACGAGGCCATTCACGGGGCCCATC...ACATGTCTTTAGGGCTGTCTGCATGTTTATTTTTACTTCCCTGGGTGGACAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp CACAAACCCACAGAACAGAACTACCCCAGGCACCAAGTGCCACGGAGAAGCACCCTGCCACATATACCCTaGATGAGAAAAACAGCTCGA +
Preference number: 4 (lower is better)
Translates to: HKPTEQNYPRHQVPRRSTLPHIP*MRKTAR
Trigger: TCGAGCTGTTTTTCTCATCCAGGGTATATGTGGCAG...GGTGCTTCTCCGTGGCACTTGGTGCCTGGGGTAGTTCTGTTCTGTGGGTTTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp TTCCCTTCCTCTAGAAACCTCTGGTCTGGCCTAAATCGAGTGTCAGTAGGTGGCAGCAAAAATCCTTTCTaGACTGGTGGCTCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: FPSSRNLWSGLNRVSVGGSKNPF*TGGSWV
Trigger: CACCCAGGAGCCACCAGTTCAGAAAGGATTTTTGCT...GCCACCTACTGACACTCGATTTAGGCCAGACCAGAGGTTTCTAGAGGAAGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp CCACAGAACAGAACTACCCCAGGCACCAAGTGCCACGGAGAAGCACCCCAACCCTATGTCACTGACATATaGGTCATCATCAGAAATCTC +
Preference number: 4 (lower is better)
Translates to: PQNRTTPGTKCHGEAPQPYVTDI*VIIRNL
Trigger: GAGATTTCTGATGATGACTCATATGTCAGTGACATA...GGGTTGGGGTGCTTCTCCGTGGCACTTGGTGCCTGGGGTAGTTCTGTTCTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp CCACAGAACAGAACTACCCCAGGCACCAAGTGCCACGGAGAAGCACCCCAACCCTATCACTTATGTCACTaGCATATGAGTCATCATCAG +
Preference number: 4 (lower is better)
Translates to: PQNRTTPGTKCHGEAPQPYHLCH*HMSHHQ
Trigger: CTGATGATGACTCATATGTCAGTGACATAAGTGATA...GGGTTGGGGTGCTTCTCCGTGGCACTTGGTGCCTGGGGTAGTTCTGTTCTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp ACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTAGCCTGGGGAGGGAAGTaGCTGGCTCTCCTGCTACAC +
Preference number: 4 (lower is better)
Translates to: TQVCATSEGKHRRNTLMLAWGGK*LALLLH
Trigger: GTGTAGCAGGAGAGCCAGTCACTTCCCTCCCCAGGC...TAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313367.7
CDS-3UTR GCA 90 bp AAAGGGGTAAGACACTCACTTAAAGCTTTACCAGAACACAACACAAAGCAAGAACACTTGCAGACAGACTaGGGGGCCGGAGCCGCGCTG +
Preference number: 4 (lower is better)
Translates to: KGVRHSLKALPEHNTKQEHLQTD*GAGAAL
Trigger: CAGCGCGGCTCCGGCCCCGCAGTCTGTCTGCAAGTG...TTCTTGCTTTGTGTTGTGTTCTGGTAAAGCTTTAAGTGAGTGTCTTACCCCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000313367.7
CDS-3UTR GCA 90 bp GCCCTAAAGACATGTTTTCCAGCCGGGCACATCGGAACAATCAGCCAGAAGGCTTCCTGTCGACTTCCTTaGTTGGAAGAGCAGCTACTT +
Preference number: 4 (lower is better)
Translates to: ALKTCFPAGHIGTISQKASCRLP*LEEQLL
Trigger: AAGTAGCTGCTCTTCCAAGCAAGGAAGTCGACAGGA...AGCCTTCTGGCTGATTGTTCCGATGTGCCCGGCTGGAAAACATGTCTTTAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp CCCACAGAACAGAACTACCCCAGGCACCAAGTGCCACGGAGAAGCACCCCAACCTCTGCTTTGATATACTaGTACGCTTCCTACTTGAAA +
Preference number: 4 (lower is better)
Translates to: PTEQNYPRHQVPRRSTPTSALIY*YASYLK
Trigger: TTTCAAGTAGGAAGCGTAGCAGTATATCAAAGCAGA...GGTTGGGGTGCTTCTCCGTGGCACTTGGTGCCTGGGGTAGTTCTGTTCTGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp GCTCAATCCACCTCTGCCCGCTTAAGATGTTATGGATGCAAGAGGTCACTTTGTGCCGAGTATGTCCGATaGAGGACGTCCATGCTTTGC +
Preference number: 4 (lower is better)
Translates to: AQSTSARLRCYGCKRSLCAEYVR*RTSMLC
Trigger: GCAAAGCATGGACGTCCTGCATCGGACATACTCGGC...ACAAAGTGACCTCTTGCATCCATAACATCTTAAGCGGGCAGAGGTGGATTGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp CCGTTGCTCACCCAAGAGTCATCGTCGGATTTCCTGAAAAACCGAGGCTGGTGCAAAGGTTTCGGGACCTaGAGTGTTCCTTTAGCATCT +
Preference number: 4 (lower is better)
Translates to: PLLTQESSSDFLKNRGWCKGFGT*SVPLAS
Trigger: AGATGCTAAAGGAACACTGCAGGTCCCGAAACCTTT...GCACCAGCCTCGGTTTTTCAGGAAATCCGACGATGACTCTTGGGTGAGCAACGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409452.5
ENST00000409759.5
CDS-3UTR GCA 90 bp TTCCCTTCCTCTAGAAACCTCTGGTCTGGCCTAAATCGAGTGTCAGTAGGTGGCTCCTGCTCCATCAGCTaGTTCAGTTTCTCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: FPSSRNLWSGLNRVSVGGSCSIS*FSFSLS
Trigger: GGAGAGAGAGAAACTGAAGCAGCTGATGGAGCAGGA...GCCACCTACTGACACTCGATTTAGGCCAGACCAGAGGTTTCTAGAGGAAGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp GCCCTAAAGACATGTTTTCCAGCCGGGCACATCGGAACAATCAGCCAGAAGGCTTCTGGAGTTTTCCTCTaGCAGATTGTCACCCGACTT +
Preference number: 4 (lower is better)
Translates to: ALKTCFPAGHIGTISQKASGVFL*QIVTRL
Trigger: AAGTCGGGTGACAATCTGGCAGAGGAAAACTCCAGA...AGCCTTCTGGCTGATTGTTCCGATGTGCCCGGCTGGAAAACATGTCTTTAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409452.5
ENST00000409863.5
CDS-3UTR GCA 90 bp TTCCCTTCCTCTAGAAACCTCTGGTCTGGCCTAAATCGAGTGTCAGTAGGTGGCCGCCGCCACAGTAGATaGTTTCATGCCATTTCCCAA +
Preference number: 4 (lower is better)
Translates to: FPSSRNLWSGLNRVSVGGRRHSR*FHAISQ
Trigger: TTGGGAAATGGCATGAAAGCATCTACTGTGGCGGCG...GCCACCTACTGACACTCGATTTAGGCCAGACCAGAGGTTTCTAGAGGAAGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp GCACAAACCCACAGAACAGAACTACCCCAGGCACCAAGTGCCACGGAGAAGCACATAAACACAGGTTTGTaGCACTTCAGAAGGCAAGCA +
Preference number: 4 (lower is better)
Translates to: AQTHRTELPQAPSATEKHINTGL*HFRRQA
Trigger: TGCTTGCCTTCTGAAGTGGCACAAACCTGTGTTTAT...GTGCTTCTCCGTGGCACTTGGTGCCTGGGGTAGTTCTGTTCTGTGGGTTTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp CCCAGGGAAGTAAAAATAAACATGCAGACAGCCCTAAAGACATGTTTTCCAGCCACCCCAGGCACCAAGTaGCACGGAGAAGCACCCCAA +
Preference number: 4 (lower is better)
Translates to: PREVKINMQTALKTCFPATPGTK*HGEAPQ
Trigger: TTGGGGTGCTTCTCCGTGGCACTTGGTGCCTGGGGT...GGCTGGAAAACATGTCTTTAGGGCTGTCTGCATGTTTATTTTTACTTCCCTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp CTTAACTTCTCAAGGACTCAGCTCTCACTAAGGAGAAATTTCCTACTGTCTCTCAGTCGGGGGCGGGGATaGCCACTTGCAGACAGACTG +
Preference number: 4 (lower is better)
Translates to: LNFSRTQLSLRRNFLLSLSRGRG*PLADRL
Trigger: CAGTCTGTCTGCAAGTGGCCATCCCCGCCCCCGACT...GAGAGACAGTAGGAAATTTCTCCTTAGTGAGAGCTGAGTCCTTGAGAAGTTAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000313367.7
CDS-3UTR CCA 90 bp AAGATCTTTTCTAAGTTCCAAATAGGTGCCGTTGCTCACCCAAGAGTCATCGTCGATTGTCACCCGACTTaGCGACAGCGGGGGAGTCGA +
Preference number: 4 (lower is better)
Translates to: KIFSKFQIGAVAHPRVIVDCHPT*RQRGSR
Trigger: TCGACTCCCCCGCTGTCGCCAAGTCGGGTGACAATC...GACGATGACTCTTGGGTGAGCAACGGCACCTATTTGGAACTTAGAAAAGATCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409452.5
ENST00000409863.5
CDS-3UTR CCA 90 bp AAGATCTTTTCTAAGTTCCAAATAGGTGCCGTTGCTCACCCAAGAGTCATCGTCTCCTTTCCAGGGGGCTaGGAATCTGCGCGGCCTTGT +
Preference number: 4 (lower is better)
Translates to: KIFSKFQIGAVAHPRVIVSFPGG*ESARPC
Trigger: ACAAGGCCGCGCAGATTCCCAGCCCCCTGGAAAGGA...GACGATGACTCTTGGGTGAGCAACGGCACCTATTTGGAACTTAGAAAAGATCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp GCCCTAAAGACATGTTTTCCAGCCGGGCACATCGGAACAATCAGCCAGAAGGCTACTGGCAGAGTCACATaGGTTGTGCCAATTGGAACA +
Preference number: 4 (lower is better)
Translates to: ALKTCFPAGHIGTISQKATGRVT*VVPIGT
Trigger: TGTTCCAATTGGCACAACCCATGTGACTCTGCCAGT...AGCCTTCTGGCTGATTGTTCCGATGTGCCCGGCTGGAAAACATGTCTTTAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp CCGTTGCTCACCCAAGAGTCATCGTCGGATTTCCTGAAAAACCGAGGCTGGTGCATGATCCCCAAAAACTaGCAGAGTCACATGGGTTGT +
Preference number: 4 (lower is better)
Translates to: PLLTQESSSDFLKNRGWCMIPKN*QSHMGC
Trigger: ACAACCCATGTGACTCTGCCAGTTTTTGGGGATCAT...GCACCAGCCTCGGTTTTTCAGGAAATCCGACGATGACTCTTGGGTGAGCAACGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp GCAGGAATCATCATGCAGGTTCTTGATGACAATCTCTCCATAGTGCTCAATCCAACCGAGGCTGGACAGTaGCAAGGGAAGGCTGACTCC +
Preference number: 4 (lower is better)
Translates to: AGIIMQVLDDNLSIVLNPTEAGQ*QGKADS
Trigger: GGAGTCAGCCTTCCCTTGCCACTGTCCAGCCTCGGT...TGGATTGAGCACTATGGAGAGATTGTCATCAAGAACCTGCATGATGATTCCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp GGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTGATGGGCCCCGTGAATaGCCTCGTGGCTTGGGGACC +
Preference number: 4 (lower is better)
Translates to: GLCHFRRQAQEKYTNVIFDGPRE*PRGLGT
Trigger: GGTCCCCAAGCCACGAGGCCATTCACGGGGCCCATC...AAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp GCAGGAATCATCATGCAGGTTCTTGATGACAATCTCTCCATAGTGCTCAATCCAGGATGTTCCACAGGCTaGTGTTACTGCTGCTCGGGC +
Preference number: 4 (lower is better)
Translates to: AGIIMQVLDDNLSIVLNPGCSTG*CYCCSG
Trigger: GCCCGAGCAGCAGTAACATCAGCCTGTGGAACATCC...TGGATTGAGCACTATGGAGAGATTGTCATCAAGAACCTGCATGATGATTCCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp GCCGTTGCTCACCCAAGAGTCATCGTCGGATTTCCTGAAAAACCGAGGCTGGTGCACATATACCCTGGATaGGAAAAACAGCTCGAGAAA +
Preference number: 4 (lower is better)
Translates to: AVAHPRVIVGFPEKPRLVHIYPG*EKQLEK
Trigger: TTTCTCGAGCTGTTTTTCTCATCCAGGGTATATGTG...CACCAGCCTCGGTTTTTCAGGAAATCCGACGATGACTCTTGGGTGAGCAACGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp CACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTCTTCTTTACGCGGGGATGGCCACTTaGAGACAGACTGCGGGGCCG +
Preference number: 4 (lower is better)
Translates to: HFRRQAQEKYTNVIFLLYAGMAT*RQTAGP
Trigger: CGGCCCCGCAGTCTGTCTGCAAGTGGCCATCCCCGC...GTAAAGAAGAAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313367.7
CDS-3UTR GCA 90 bp GCCGTTGCTCACCCAAGAGTCATCGTCGGATTTCCTGAAAAACCGAGGCTGGTGTCGAGACAATCAAAATaGCATCAGATGACAAGGGAG +
Preference number: 4 (lower is better)
Translates to: AVAHPRVIVGFPEKPRLVSRQSK*HQMTRE
Trigger: CTCCCTTGTCATCTGATGGCATTTTGATTGTCTCGA...CACCAGCCTCGGTTTTTCAGGAAATCCGACGATGACTCTTGGGTGAGCAACGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp AAATATATAAACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACAGGGGGCTGGGAATCTaGGCGGCCTTGTCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: KYINTGLCHFRRQAQEKYRGLGI*AALSRS
Trigger: GCTCCTGGACAAGGCCGCGCAGATTCCCAGCCCCCT...GTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGTTTATATATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp CCGTTGCTCACCCAAGAGTCATCGTCGGATTTCCTGAAAAACCGAGGCTGGTGCGAGTCACATGGGTTGTaGCAATTGGAACAATTTCCA +
Preference number: 4 (lower is better)
Translates to: PLLTQESSSDFLKNRGWCESHGL*QLEQFP
Trigger: TGGAAATTGTTCCAATTGGCACAACCCATGTGACTC...GCACCAGCCTCGGTTTTTCAGGAAATCCGACGATGACTCTTGGGTGAGCAACGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp CCCACAGAACAGAACTACCCCAGGCACCAAGTGCCACGGAGAAGCACCCCAACCAGTTGTTCAATCCTCTaGTTTTGTATTTCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: PTEQNYPRHQVPRRSTPTSCSIL*FCISAS
Trigger: AGAAGCTGAAATACAAAAGCAGAGGATTGAACAACT...GGTTGGGGTGCTTCTCCGTGGCACTTGGTGCCTGGGGTAGTTCTGTTCTGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp TTCCCTTCCTCTAGAAACCTCTGGTCTGGCCTAAATCGAGTGTCAGTAGGTGGCTCTCATCACTCATCATaGACAGCAAGTCACTTGGCC +
Preference number: 4 (lower is better)
Translates to: FPSSRNLWSGLNRVSVGGSHHSS*TASHLA
Trigger: GGCCAAGTGACTTGCTGTCCATGATGAGTGATGAGA...GCCACCTACTGACACTCGATTTAGGCCAGACCAGAGGTTTCTAGAGGAAGGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp GCCGTTGCTCACCCAAGAGTCATCGTCGGATTTCCTGAAAAACCGAGGCTGGTGAAATCCTTTCTGAACTaGTGGCTCCTGGGTGTAATT +
Preference number: 4 (lower is better)
Translates to: AVAHPRVIVGFPEKPRLVKSFLN*WLLGVI
Trigger: AATTACACCCAGGAGCCACCAGTTCAGAAAGGATTT...CACCAGCCTCGGTTTTTCAGGAAATCCGACGATGACTCTTGGGTGAGCAACGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp TTCCCTTCCTCTAGAAACCTCTGGTCTGGCCTAAATCGAGTGTCAGTAGGTGGCAGTGCGCCAGGTCTTTaGAGCATTTTTCCATGTCCT +
Preference number: 4 (lower is better)
Translates to: FPSSRNLWSGLNRVSVGGSAPGL*SIFPCP
Trigger: AGGACATGGAAAAATGCTCCAAAGACCTGGCGCACT...GCCACCTACTGACACTCGATTTAGGCCAGACCAGAGGTTTCTAGAGGAAGGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp ACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTAGATTGTCACCCGACTTaGCGACAGCGGGGGAGTCGA +
Preference number: 4 (lower is better)
Translates to: TQVCATSEGKHRRNTLMLDCHPT*RQRGSR
Trigger: TCGACTCCCCCGCTGTCGCCAAGTCGGGTGACAATC...TAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409863.5
CDS-3UTR CCA 90 bp ACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCCTTTCCAGGGGGCTaGGAATCTGCGCGGCCTTGT +
Preference number: 4 (lower is better)
Translates to: TQVCATSEGKHRRNTLMLSFPGG*ESARPC
Trigger: ACAAGGCCGCGCAGATTCCCAGCCCCCTGGAAAGGA...TAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp TTCCCTTCCTCTAGAAACCTCTGGTCTGGCCTAAATCGAGTGTCAGTAGGTGGCTCCTCTAGAAACCTCTaGTCTGGCCTAAATCGAGTG +
Preference number: 4 (lower is better)
Translates to: FPSSRNLWSGLNRVSVGGSSRNL*SGLNRV
Trigger: CACTCGATTTAGGCCAGACCAGAGGTTTCTAGAGGA...GCCACCTACTGACACTCGATTTAGGCCAGACCAGAGGTTTCTAGAGGAAGGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp GCTCAATCCACCTCTGCCCGCTTAAGATGTTATGGATGCAAGAGGTCACTTTGTAGCAAAAATCCTTTCTaGACTGGTGGCTCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: AQSTSARLRCYGCKRSLCSKNPF*TGGSWV
Trigger: CACCCAGGAGCCACCAGTTCAGAAAGGATTTTTGCT...ACAAAGTGACCTCTTGCATCCATAACATCTTAAGCGGGCAGAGGTGGATTGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp CCGTTGCTCACCCAAGAGTCATCGTCGGATTTCCTGAAAAACCGAGGCTGGTGCATCAAAGACTTCTTCTaGCTTGACCTTCAGATGGTA +
Preference number: 4 (lower is better)
Translates to: PLLTQESSSDFLKNRGWCIKDFF*LDLQMV
Trigger: TACCATCTGAAGGTCAAGTCAGAAGAAGTCTTTGAT...GCACCAGCCTCGGTTTTTCAGGAAATCCGACGATGACTCTTGGGTGAGCAACGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp TTCCCTTCCTCTAGAAACCTCTGGTCTGGCCTAAATCGAGTGTCAGTAGGTGGCTGTGATGGTGGACCCTaGGAAAAAGTGGTTAACTTC +
Preference number: 4 (lower is better)
Translates to: FPSSRNLWSGLNRVSVGGCDGGP*EKVVNF
Trigger: GAAGTTAACCACTTTTTCTCAGGGTCCACCATCACA...GCCACCTACTGACACTCGATTTAGGCCAGACCAGAGGTTTCTAGAGGAAGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp ACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTACGTTCTTCAGACCAATaGCCTGAGCAGACGGGGAGG +
Preference number: 4 (lower is better)
Translates to: TQVCATSEGKHRRNTLMLRSSDQ*PEQTGR
Trigger: CCTCCCCGTCTGCTCAGGTCATTGGTCTGAAGAACG...TAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp GCACAAACCCACAGAACAGAACTACCCCAGGCACCAAGTGCCACGGAGAAGCACTATCACTTATGTCACTaGCATATGAGTCATCATCAG +
Preference number: 4 (lower is better)
Translates to: AQTHRTELPQAPSATEKHYHLCH*HMSHHQ
Trigger: CTGATGATGACTCATATGTCAGTGACATAAGTGATA...GTGCTTCTCCGTGGCACTTGGTGCCTGGGGTAGTTCTGTTCTGTGGGTTTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp ACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTAGGATGTTCCACAGGCTaGTGTTACTGCTGCTCGGGC +
Preference number: 4 (lower is better)
Translates to: TQVCATSEGKHRRNTLMLGCSTG*CYCCSG
Trigger: GCCCGAGCAGCAGTAACATCAGCCTGTGGAACATCC...TAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp GCTCAATCCACCTCTGCCCGCTTAAGATGTTATGGATGCAAGAGGTCACTTTGTACGGAACAATCAAAATaGAACCGGAGGGAACAGGGG +
Preference number: 4 (lower is better)
Translates to: AQSTSARLRCYGCKRSLCTEQSK*NRREQG
Trigger: CCCCTGTTCCCTCCGGTTTCATTTTGATTGTTCCGT...ACAAAGTGACCTCTTGCATCCATAACATCTTAAGCGGGCAGAGGTGGATTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp GCAGGAATCATCATGCAGGTTCTTGATGACAATCTCTCCATAGTGCTCAATCCACAAATCCTCACAAGGTaGCTGGAAACAGCCAGGCGG +
Preference number: 4 (lower is better)
Translates to: AGIIMQVLDDNLSIVLNPQILTR*LETARR
Trigger: CCGCCTGGCTGTTTCCAGTCACCTTGTGAGGATTTG...TGGATTGAGCACTATGGAGAGATTGTCATCAAGAACCTGCATGATGATTCCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp GCCCTAAAGACATGTTTTCCAGCCGGGCACATCGGAACAATCAGCCAGAAGGCTCACATATACCCTGGATaGGAAAAACAGCTCGAGAAA +
Preference number: 4 (lower is better)
Translates to: ALKTCFPAGHIGTISQKAHIYPG*EKQLEK
Trigger: TTTCTCGAGCTGTTTTTCTCATCCAGGGTATATGTG...AGCCTTCTGGCTGATTGTTCCGATGTGCCCGGCTGGAAAACATGTCTTTAGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp TTCCCTTCCTCTAGAAACCTCTGGTCTGGCCTAAATCGAGTGTCAGTAGGTGGCAAGAGCAGCTACTTGTaGTCCTTGAAGGTGATACCA +
Preference number: 4 (lower is better)
Translates to: FPSSRNLWSGLNRVSVGGKSSYL*SLKVIP
Trigger: TGGTATCACCTTCAAGGAGCACAAGTAGCTGCTCTT...GCCACCTACTGACACTCGATTTAGGCCAGACCAGAGGTTTCTAGAGGAAGGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp GCACAAACCCACAGAACAGAACTACCCCAGGCACCAAGTGCCACGGAGAAGCACCGGTGTCAAGGTCTATaGATTTTGATGACTTCTTTA +
Preference number: 4 (lower is better)
Translates to: AQTHRTELPQAPSATEKHRCQGL*ILMTSL
Trigger: TAAAGAAGTCATCAAAATGCATAGACCTTGACACCG...GTGCTTCTCCGTGGCACTTGGTGCCTGGGGTAGTTCTGTTCTGTGGGTTTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp GCAGGAATCATCATGCAGGTTCTTGATGACAATCTCTCCATAGTGCTCAATCCAGATGCAGGACGTCCATaGTTTGCAGGAGCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: AGIIMQVLDDNLSIVLNPDAGRP*FAGAGS
Trigger: TGAGCCAGCTCCTGCAAAGCATGGACGTCCTGCATC...TGGATTGAGCACTATGGAGAGATTGTCATCAAGAACCTGCATGATGATTCCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp GCAGGAATCATCATGCAGGTTCTTGATGACAATCTCTCCATAGTGCTCAATCCAGCCGAGTATGTCCGATaGAGGACGTCCATGCTTTGC +
Preference number: 4 (lower is better)
Translates to: AGIIMQVLDDNLSIVLNPAEYVR*RTSMLC
Trigger: GCAAAGCATGGACGTCCTGCATCGGACATACTCGGC...TGGATTGAGCACTATGGAGAGATTGTCATCAAGAACCTGCATGATGATTCCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp CACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTCTTCTTTACAGGGGGCTGGGAATCTaGGCGGCCTTGTCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: HFRRQAQEKYTNVIFLLYRGLGI*AALSRS
Trigger: GCTCCTGGACAAGGCCGCGCAGATTCCCAGCCCCCT...GTAAAGAAGAAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp TTCCCTTCCTCTAGAAACCTCTGGTCTGGCCTAAATCGAGTGTCAGTAGGTGGCTCCTGTCAAACACTGTaGCTTCAATCTCATGGGCAT +
Preference number: 4 (lower is better)
Translates to: FPSSRNLWSGLNRVSVGGSCQTL*LQSHGH
Trigger: ATGCCCATGAGATTGAAGGCACAGTGTTTGACAGGA...GCCACCTACTGACACTCGATTTAGGCCAGACCAGAGGTTTCTAGAGGAAGGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp GCTCAATCCACCTCTGCCCGCTTAAGATGTTATGGATGCAAGAGGTCACTTTGTCGCCGCCACAGTAGATaGTTTCATGCCATTTCCCAA +
Preference number: 4 (lower is better)
Translates to: AQSTSARLRCYGCKRSLCRRHSR*FHAISQ
Trigger: TTGGGAAATGGCATGAAAGCATCTACTGTGGCGGCG...ACAAAGTGACCTCTTGCATCCATAACATCTTAAGCGGGCAGAGGTGGATTGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp TTCCCTTCCTCTAGAAACCTCTGGTCTGGCCTAAATCGAGTGTCAGTAGGTGGCGGACAGCAAGTCACTTaGCCTCGAGACAATCAAAAT +
Preference number: 4 (lower is better)
Translates to: FPSSRNLWSGLNRVSVGGGQQVT*PRDNQN
Trigger: ATTTTGATTGTCTCGAGGCCAAGTGACTTGCTGTCC...GCCACCTACTGACACTCGATTTAGGCCAGACCAGAGGTTTCTAGAGGAAGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp GCCCTAAAGACATGTTTTCCAGCCGGGCACATCGGAACAATCAGCCAGAAGGCTAAATCCTTTCTGAACTaGTGGCTCCTGGGTGTAATT +
Preference number: 4 (lower is better)
Translates to: ALKTCFPAGHIGTISQKAKSFLN*WLLGVI
Trigger: AATTACACCCAGGAGCCACCAGTTCAGAAAGGATTT...AGCCTTCTGGCTGATTGTTCCGATGTGCCCGGCTGGAAAACATGTCTTTAGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp CCGTTGCTCACCCAAGAGTCATCGTCGGATTTCCTGAAAAACCGAGGCTGGTGCCTCTCTATATCGGTTTaGCTCTTGGCATATTTCAAG +
Preference number: 4 (lower is better)
Translates to: PLLTQESSSDFLKNRGWCLSISV*LLAYFK
Trigger: CTTGAAATATGCCAAGAGCCAAACCGATATAGAGAG...GCACCAGCCTCGGTTTTTCAGGAAATCCGACGATGACTCTTGGGTGAGCAACGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp GGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTTCCTTTCCAGGGGGCTaGGAATCTGCGCGGCCTTGT +
Preference number: 4 (lower is better)
Translates to: GLCHFRRQAQEKYTNVIFSFPGG*ESARPC
Trigger: ACAAGGCCGCGCAGATTCCCAGCCCCCTGGAAAGGA...AAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp GCACAAACCCACAGAACAGAACTACCCCAGGCACCAAGTGCCACGGAGAAGCACATGGGTTGTGCCAATTaGAACAATTTCCATGGATTT +
Preference number: 4 (lower is better)
Translates to: AQTHRTELPQAPSATEKHMGCAN*NNFHGF
Trigger: AAATCCATGGAAATTGTTCCAATTGGCACAACCCAT...GTGCTTCTCCGTGGCACTTGGTGCCTGGGGTAGTTCTGTTCTGTGGGTTTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp GCCCTAAAGACATGTTTTCCAGCCGGGCACATCGGAACAATCAGCCAGAAGGCTCCGCTTAAGATGTTATaGATGCAAGAGGTCACTTTG +
Preference number: 4 (lower is better)
Translates to: ALKTCFPAGHIGTISQKAPLKML*MQEVTL
Trigger: CAAAGTGACCTCTTGCATCCATAACATCTTAAGCGG...AGCCTTCTGGCTGATTGTTCCGATGTGCCCGGCTGGAAAACATGTCTTTAGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp GCCCTAAAGACATGTTTTCCAGCCGGGCACATCGGAACAATCAGCCAGAAGGCTCACCATAAGACAGGATaGTCCAGTTTGGAAAAACCA +
Preference number: 4 (lower is better)
Translates to: ALKTCFPAGHIGTISQKAHHKTG*SSLEKP
Trigger: TGGTTTTTCCAAACTGGACCATCCTGTCTTATGGTG...AGCCTTCTGGCTGATTGTTCCGATGTGCCCGGCTGGAAAACATGTCTTTAGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp AAATATATAAACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACAGCCTTGGGGTGCTTTaGGGCCTGGGGAGGGAAGTG +
Preference number: 4 (lower is better)
Translates to: KYINTGLCHFRRQAQEKYSLGVL*GLGREV
Trigger: CACTTCCCTCCCCAGGCCCCAAAGCACCCCAAGGCT...GTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGTTTATATATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313367.7
CDS-3UTR CCA 90 bp ACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTAAAGGAATACCAGCCTTaGGGTGCTTTGGGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: TQVCATSEGKHRRNTLMLKEYQP*GALGPG
Trigger: CCCAGGCCCCAAAGCACCCCAAGGCTGGTATTCCTT...TAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313367.7
CDS-3UTR CCA 90 bp AAATATATAAACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACCTTGGGGACCGAGGCTaGACAGTGGCAAGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: KYINTGLCHFRRQAQEKYLGDRG*TVAREG
Trigger: GCCTTCCCTTGCCACTGTCCAGCCTCGGTCCCCAAG...GTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGTTTATATATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp CACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTCTTCTTTACGATGGGCCCCGTGAATaGCCTCGTGGCTTGGGGACC +
Preference number: 4 (lower is better)
Translates to: HFRRQAQEKYTNVIFLLYDGPRE*PRGLGT
Trigger: GGTCCCCAAGCCACGAGGCCATTCACGGGGCCCATC...GTAAAGAAGAAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp GCCGTTGCTCACCCAAGAGTCATCGTCGGATTTCCTGAAAAACCGAGGCTGGTGACTTTATGGGCAATATaGCACAGATCTTCTTGCATT +
Preference number: 4 (lower is better)
Translates to: AVAHPRVIVGFPEKPRLVTLWAI*HRSSCI
Trigger: AATGCAAGAAGATCTGTGTCATATTGCCCATAAAGT...CACCAGCCTCGGTTTTTCAGGAAATCCGACGATGACTCTTGGGTGAGCAACGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp CCCAGGGAAGTAAAAATAAACATGCAGACAGCCCTAAAGACATGTTTTCCAGCCGGCTGGTGCTCCACATaGTTTTCTTCTAAGACCCGC +
Preference number: 4 (lower is better)
Translates to: PREVKINMQTALKTCFPAGWCST*FSSKTR
Trigger: GCGGGTCTTAGAAGAAAATCATGTGGAGCACCAGCC...GGCTGGAAAACATGTCTTTAGGGCTGTCTGCATGTTTATTTTTACTTCCCTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp TGTTTCTCCAAGAACCGGATTAAATGGCTTGCTTCCAGCTCGGTAGTAGCTAGAACGGAACAATCAAAATaGAACCGGAGGGAACAGGGG +
Preference number: 4 (lower is better)
Translates to: CFSKNRIKWLASSSVVARTEQSK*NRREQG
Trigger: CCCCTGTTCCCTCCGGTTTCATTTTGATTGTTCCGT...TCTAGCTACTACCGAGCTGGAAGCAAGCCATTTAATCCGGTTCTTGGAGAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp CCGTTGCTCACCCAAGAGTCATCGTCGGATTTCCTGAAAAACCGAGGCTGGTGCTCTGCTTTGATATACTaGTACGCTTCCTACTTGAAA +
Preference number: 4 (lower is better)
Translates to: PLLTQESSSDFLKNRGWCSALIY*YASYLK
Trigger: TTTCAAGTAGGAAGCGTAGCAGTATATCAAAGCAGA...GCACCAGCCTCGGTTTTTCAGGAAATCCGACGATGACTCTTGGGTGAGCAACGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp GCCGTTGCTCACCCAAGAGTCATCGTCGGATTTCCTGAAAAACCGAGGCTGGTGTCTGCTTTGATATACTaGTACGCTTCCTACTTGAAA +
Preference number: 4 (lower is better)
Translates to: AVAHPRVIVGFPEKPRLVSALIY*YASYLK
Trigger: TTTCAAGTAGGAAGCGTAGCAGTATATCAAAGCAGA...CACCAGCCTCGGTTTTTCAGGAAATCCGACGATGACTCTTGGGTGAGCAACGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp ACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTAGATGCAGGACGTCCATaGTTTGCAGGAGCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: TQVCATSEGKHRRNTLMLDAGRP*FAGAGS
Trigger: TGAGCCAGCTCCTGCAAAGCATGGACGTCCTGCATC...TAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp TTCTGTCCACCCAGGGAAGTAAAAATAAACATGCAGACAGCCCTAAAGACATGTGATGCAGGACGTCCATaGTTTGCAGGAGCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: FCPPREVKINMQTALKTCDAGRP*FAGAGS
Trigger: TGAGCCAGCTCCTGCAAAGCATGGACGTCCTGCATC...ACATGTCTTTAGGGCTGTCTGCATGTTTATTTTTACTTCCCTGGGTGGACAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp AAACTGGAAGCCCTTGTCCTCCCGAATACATTCATATGTTTCTCCAAGAACCGGCGCCGCCACAGTAGATaGTTTCATGCCATTTCCCAA +
Preference number: 4 (lower is better)
Translates to: KLEALVLPNTFICFSKNRRRHSR*FHAISQ
Trigger: TTGGGAAATGGCATGAAAGCATCTACTGTGGCGGCG...CCGGTTCTTGGAGAAACATATGAATGTATTCGGGAGGACAAGGGCTTCCAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp CACAAACCCACAGAACAGAACTACCCCAGGCACCAAGTGCCACGGAGAAGCACCAGTTGTTCAATCCTCTaGTTTTGTATTTCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: HKPTEQNYPRHQVPRRSTSCSIL*FCISAS
Trigger: AGAAGCTGAAATACAAAAGCAGAGGATTGAACAACT...GGTGCTTCTCCGTGGCACTTGGTGCCTGGGGTAGTTCTGTTCTGTGGGTTTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp CCCAGGGAAGTAAAAATAAACATGCAGACAGCCCTAAAGACATGTTTTCCAGCCCGCCGCCTTTCTCTCTaGAGTTGTTCAATCCTCTGC +
Preference number: 4 (lower is better)
Translates to: PREVKINMQTALKTCFPARRLSL*SCSILC
Trigger: GCAGAGGATTGAACAACTGCAGAGAGAAAGGCGGCG...GGCTGGAAAACATGTCTTTAGGGCTGTCTGCATGTTTATTTTTACTTCCCTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp TTCCCTTCCTCTAGAAACCTCTGGTCTGGCCTAAATCGAGTGTCAGTAGGTGGCATAAACACAGGTTTGTaGCACTTCAGAAGGCAAGCA +
Preference number: 4 (lower is better)
Translates to: FPSSRNLWSGLNRVSVGGINTGL*HFRRQA
Trigger: TGCTTGCCTTCTGAAGTGGCACAAACCTGTGTTTAT...GCCACCTACTGACACTCGATTTAGGCCAGACCAGAGGTTTCTAGAGGAAGGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp GGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTAGGGAGCCGAGAGTATaGAAGTCCCCAGTGGCAGGT +
Preference number: 4 (lower is better)
Translates to: GLCHFRRQAQEKYTNVIFREPRV*KSPVAG
Trigger: ACCTGCCACTGGGGACTTCCATACTCTCGGCTCCCT...AAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp AAACTGGAAGCCCTTGTCCTCCCGAATACATTCATATGTTTCTCCAAGAACCGGGTCGACTTCCTTGCTTaGAAGAGCAGCTACTTGTGC +
Preference number: 4 (lower is better)
Translates to: KLEALVLPNTFICFSKNRVDFLA*KSSYLC
Trigger: GCACAAGTAGCTGCTCTTCCAAGCAAGGAAGTCGAC...CCGGTTCTTGGAGAAACATATGAATGTATTCGGGAGGACAAGGGCTTCCAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp CCGTTGCTCACCCAAGAGTCATCGTCGGATTTCCTGAAAAACCGAGGCTGGTGCCTTCATGTGGAAACATaGCAATTTCATTCTGACGAT +
Preference number: 4 (lower is better)
Translates to: PLLTQESSSDFLKNRGWCLHVET*QFHSDD
Trigger: ATCGTCAGAATGAAATTGCCATGTTTCCACATGAAG...GCACCAGCCTCGGTTTTTCAGGAAATCCGACGATGACTCTTGGGTGAGCAACGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp GCAGGAATCATCATGCAGGTTCTTGATGACAATCTCTCCATAGTGCTCAATCCAGATGGCGTTGATAGCTaGTGCCGAGTATGTCCGATG +
Preference number: 4 (lower is better)
Translates to: AGIIMQVLDDNLSIVLNPDGVDS*CRVCPM
Trigger: CATCGGACATACTCGGCACCAGCTATCAACGCCATC...TGGATTGAGCACTATGGAGAGATTGTCATCAAGAACCTGCATGATGATTCCTGC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp AAGATCTTTTCTAAGTTCCAAATAGGTGCCGTTGCTCACCCAAGAGTCATCGTCGATGGCGTTGATAGCTaGTGCCGAGTATGTCCGATG +
Preference number: 4 (lower is better)
Translates to: KIFSKFQIGAVAHPRVIVDGVDS*CRVCPM
Trigger: CATCGGACATACTCGGCACCAGCTATCAACGCCATC...GACGATGACTCTTGGGTGAGCAACGGCACCTATTTGGAACTTAGAAAAGATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp AAATATATAAACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACGATTGTCACCCGACTTaGCGACAGCGGGGGAGTCGA +
Preference number: 4 (lower is better)
Translates to: KYINTGLCHFRRQAQEKYDCHPT*RQRGSR
Trigger: TCGACTCCCCCGCTGTCGCCAAGTCGGGTGACAATC...GTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGTTTATATATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409863.5
CDS-3UTR CCA 90 bp TTCCCTTCCTCTAGAAACCTCTGGTCTGGCCTAAATCGAGTGTCAGTAGGTGGCCCGCTTAAGATGTTATaGATGCAAGAGGTCACTTTG +
Preference number: 4 (lower is better)
Translates to: FPSSRNLWSGLNRVSVGGPLKML*MQEVTL
Trigger: CAAAGTGACCTCTTGCATCCATAACATCTTAAGCGG...GCCACCTACTGACACTCGATTTAGGCCAGACCAGAGGTTTCTAGAGGAAGGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp ATAGACTTAAAGAGTTACAATGCTAAGCTAAGCACAAGTGATCATCCTAGAGTAGATGGGCCCCGTGAATaGCCTCGTGGCTTGGGGACC +
Preference number: 4 (lower is better)
Translates to: IDLKSYNAKLSTSDHPRVDGPRE*PRGLGT
Trigger: GGTCCCCAAGCCACGAGGCCATTCACGGGGCCCATC...TACTCTAGGATGATCACTTGTGCTTAGCTTAGCATTGTAACTCTTTAAGTCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409452.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp GGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTGCACGCGGCCAGTTCTaGGTACTTTGCCCAGAACTT +
Preference number: 4 (lower is better)
Translates to: GLCHFRRQAQEKYTNVIFARGQF*VLCPEL
Trigger: AAGTTCTGGGCAAAGTACTCAGAACTGGCCGCGTGC...AAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313367.7
CDS-3UTR TCA 90 bp AAAGGGGTAAGACACTCACTTAAAGCTTTACCAGAACACAACACAAAGCAAGAAGGAAACCCTAAAACCTaGGCGCTGTGCAGCCGGAGA +
Preference number: 4 (lower is better)
Translates to: KGVRHSLKALPEHNTKQEGNPKT*ALCSRR
Trigger: TCTCCGGCTGCACAGCGCTCAGGTTTTAGGGTTTCC...TTCTTGCTTTGTGTTGTGTTCTGGTAAAGCTTTAAGTGAGTGTCTTACCCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313367.7
CDS-3UTR TCA 90 bp TGTTTCTCCAAGAACCGGATTAAATGGCTTGCTTCCAGCTCGGTAGTAGCTAGACAGATGAAGAGTCTGTaGTGGTGGACCCTGAGAAAA +
Preference number: 4 (lower is better)
Translates to: CFSKNRIKWLASSSVVARQMKSL*WWTLRK
Trigger: TTTTCTCAGGGTCCACCATCACAGACTCTTCATCTG...TCTAGCTACTACCGAGCTGGAAGCAAGCCATTTAATCCGGTTCTTGGAGAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp AAAGGGGTAAGACACTCACTTAAAGCTTTACCAGAACACAACACAAAGCAAGAACGTTCTTCAGACCAATaGCCTGAGCAGACGGGGAGG +
Preference number: 4 (lower is better)
Translates to: KGVRHSLKALPEHNTKQERSSDQ*PEQTGR
Trigger: CCTCCCCGTCTGCTCAGGTCATTGGTCTGAAGAACG...TTCTTGCTTTGTGTTGTGTTCTGGTAAAGCTTTAAGTGAGTGTCTTACCCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313367.7
CDS-3UTR TCA 90 bp AAATATATAAACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACCGTTCTTCAGACCAATaGCCTGAGCAGACGGGGAGG +
Preference number: 4 (lower is better)
Translates to: KYINTGLCHFRRQAQEKYRSSDQ*PEQTGR
Trigger: CCTCCCCGTCTGCTCAGGTCATTGGTCTGAAGAACG...GTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGTTTATATATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp AAATATATAAACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACGGATGTTCCACAGGCTaGTGTTACTGCTGCTCGGGC +
Preference number: 4 (lower is better)
Translates to: KYINTGLCHFRRQAQEKYGCSTG*CYCCSG
Trigger: GCCCGAGCAGCAGTAACATCAGCCTGTGGAACATCC...GTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGTTTATATATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp TTCTGTCCACCCAGGGAAGTAAAAATAAACATGCAGACAGCCCTAAAGACATGTGCTAGATGCATACGCTaGTATGGCAAAGGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: FCPPREVKINMQTALKTCARCIR*YGKGCH
Trigger: GTGGCAGCCTTTGCCATATCAGCGTATGCATCTAGC...ACATGTCTTTAGGGCTGTCTGCATGTTTATTTTTACTTCCCTGGGTGGACAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp ACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTAGCTAGATGCATACGCTaGTATGGCAAAGGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: TQVCATSEGKHRRNTLMLARCIR*YGKGCH
Trigger: GTGGCAGCCTTTGCCATATCAGCGTATGCATCTAGC...TAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp CCCAGGGAAGTAAAAATAAACATGCAGACAGCCCTAAAGACATGTTTTCCAGCCTTTCTAGACTCAGCATaGCACGCAGAGATAGGCGGA +
Preference number: 4 (lower is better)
Translates to: PREVKINMQTALKTCFPAFLDSA*HAEIGG
Trigger: TCCGCCTATCTCTGCGTGTCATGCTGAGTCTAGAAA...GGCTGGAAAACATGTCTTTAGGGCTGTCTGCATGTTTATTTTTACTTCCCTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp ACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTAGGCTGGTGCTCCACATaGTTTTCTTCTAAGACCCGC +
Preference number: 4 (lower is better)
Translates to: TQVCATSEGKHRRNTLMLGWCST*FSSKTR
Trigger: GCGGGTCTTAGAAGAAAATCATGTGGAGCACCAGCC...TAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp TTCTGTCCACCCAGGGAAGTAAAAATAAACATGCAGACAGCCCTAAAGACATGTGGCTGGTGCTCCACATaGTTTTCTTCTAAGACCCGC +
Preference number: 4 (lower is better)
Translates to: FCPPREVKINMQTALKTCGWCST*FSSKTR
Trigger: GCGGGTCTTAGAAGAAAATCATGTGGAGCACCAGCC...ACATGTCTTTAGGGCTGTCTGCATGTTTATTTTTACTTCCCTGGGTGGACAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp AAACTGGAAGCCCTTGTCCTCCCGAATACATTCATATGTTTCTCCAAGAACCGGTCCTGTCGACTTCCTTaGTTGGAAGAGCAGCTACTT +
Preference number: 4 (lower is better)
Translates to: KLEALVLPNTFICFSKNRSCRLP*LEEQLL
Trigger: AAGTAGCTGCTCTTCCAAGCAAGGAAGTCGACAGGA...CCGGTTCTTGGAGAAACATATGAATGTATTCGGGAGGACAAGGGCTTCCAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp ACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTAAGAGCCCGACATCAATaGAGCCATGCAGCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: TQVCATSEGKHRRNTLMLRARHQ*SHAASL
Trigger: GAGAGAAGCTGCATGGCTGCATTGATGTCGGGCTCT...TAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp TTCTGTCCACCCAGGGAAGTAAAAATAAACATGCAGACAGCCCTAAAGACATGTAGAGCCCGACATCAATaGAGCCATGCAGCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: FCPPREVKINMQTALKTCRARHQ*SHAASL
Trigger: GAGAGAAGCTGCATGGCTGCATTGATGTCGGGCTCT...ACATGTCTTTAGGGCTGTCTGCATGTTTATTTTTACTTCCCTGGGTGGACAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp GGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTGATGCAGGACGTCCATaGTTTGCAGGAGCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: GLCHFRRQAQEKYTNVIFDAGRP*FAGAGS
Trigger: TGAGCCAGCTCCTGCAAAGCATGGACGTCCTGCATC...AAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp CTTGTCCTCCCGAATACATTCATATGTTTCTCCAAGAACCGGATTAAATGGCTTGATGCAGGACGTCCATaGTTTGCAGGAGCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: LVLPNTFICFSKNRIKWLDAGRP*FAGAGS
Trigger: TGAGCCAGCTCCTGCAAAGCATGGACGTCCTGCATC...AAGCCATTTAATCCGGTTCTTGGAGAAACATATGAATGTATTCGGGAGGACAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp CCCAGGGAAGTAAAAATAAACATGCAGACAGCCCTAAAGACATGTTTTCCAGCCTCCTGCTCCATCAGCTaGTTCAGTTTCTCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: PREVKINMQTALKTCFPASCSIS*FSFSLS
Trigger: GGAGAGAGAGAAACTGAAGCAGCTGATGGAGCAGGA...GGCTGGAAAACATGTCTTTAGGGCTGTCTGCATGTTTATTTTTACTTCCCTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp TGTTTCTCCAAGAACCGGATTAAATGGCTTGCTTCCAGCTCGGTAGTAGCTAGATGCTCAATCCACCTCTaGCCGCTTAAGATGTTATGG +
Preference number: 4 (lower is better)
Translates to: CFSKNRIKWLASSSVVARCSIHL*PLKMLW
Trigger: CCATAACATCTTAAGCGGGCAGAGGTGGATTGAGCA...TCTAGCTACTACCGAGCTGGAAGCAAGCCATTTAATCCGGTTCTTGGAGAAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp TTCTGTCCACCCAGGGAAGTAAAAATAAACATGCAGACAGCCCTAAAGACATGTCGCCGCCTTTCTCTCTaGAGTTGTTCAATCCTCTGC +
Preference number: 4 (lower is better)
Translates to: FCPPREVKINMQTALKTCRRLSL*SCSILC
Trigger: GCAGAGGATTGAACAACTGCAGAGAGAAAGGCGGCG...ACATGTCTTTAGGGCTGTCTGCATGTTTATTTTTACTTCCCTGGGTGGACAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp AAAGGGGTAAGACACTCACTTAAAGCTTTACCAGAACACAACACAAAGCAAGAAAGGGAGCCGAGAGTATaGAAGTCCCCAGTGGCAGGT +
Preference number: 4 (lower is better)
Translates to: KGVRHSLKALPEHNTKQEREPRV*KSPVAG
Trigger: ACCTGCCACTGGGGACTTCCATACTCTCGGCTCCCT...TTCTTGCTTTGTGTTGTGTTCTGGTAAAGCTTTAAGTGAGTGTCTTACCCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313367.7
CDS-3UTR CCA 90 bp GCTCAATCCACCTCTGCCCGCTTAAGATGTTATGGATGCAAGAGGTCACTTTGTGGACAGCAAGTCACTTaGCCTCGAGACAATCAAAAT +
Preference number: 4 (lower is better)
Translates to: AQSTSARLRCYGCKRSLCGQQVT*PRDNQN
Trigger: ATTTTGATTGTCTCGAGGCCAAGTGACTTGCTGTCC...ACAAAGTGACCTCTTGCATCCATAACATCTTAAGCGGGCAGAGGTGGATTGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp TTCCCTTCCTCTAGAAACCTCTGGTCTGGCCTAAATCGAGTGTCAGTAGGTGGCCTCTCTATATCGGTTTaGCTCTTGGCATATTTCAAG +
Preference number: 4 (lower is better)
Translates to: FPSSRNLWSGLNRVSVGGLSISV*LLAYFK
Trigger: CTTGAAATATGCCAAGAGCCAAACCGATATAGAGAG...GCCACCTACTGACACTCGATTTAGGCCAGACCAGAGGTTTCTAGAGGAAGGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp CACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTCTTCTTTACTCCTTTCCAGGGGGCTaGGAATCTGCGCGGCCTTGT +
Preference number: 4 (lower is better)
Translates to: HFRRQAQEKYTNVIFLLYSFPGG*ESARPC
Trigger: ACAAGGCCGCGCAGATTCCCAGCCCCCTGGAAAGGA...GTAAAGAAGAAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp ACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTAGCAGAGATAGGCGGATaGTGGCTGACCTGTTCTGAA +
Preference number: 4 (lower is better)
Translates to: TQVCATSEGKHRRNTLMLAEIGG*WLTCSE
Trigger: TTCAGAACAGGTCAGCCACCATCCGCCTATCTCTGC...TAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp AAACTGGAAGCCCTTGTCCTCCCGAATACATTCATATGTTTCTCCAAGAACCGGTCCTCTAGAAACCTCTaGTCTGGCCTAAATCGAGTG +
Preference number: 4 (lower is better)
Translates to: KLEALVLPNTFICFSKNRSSRNL*SGLNRV
Trigger: CACTCGATTTAGGCCAGACCAGAGGTTTCTAGAGGA...CCGGTTCTTGGAGAAACATATGAATGTATTCGGGAGGACAAGGGCTTCCAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp AAAGGGGTAAGACACTCACTTAAAGCTTTACCAGAACACAACACAAAGCAAGAAGGGGAGGGAAGTGACTaGCTCTCCTGCTACACTGGA +
Preference number: 4 (lower is better)
Translates to: KGVRHSLKALPEHNTKQEGEGSD*LSCYTG
Trigger: TCCAGTGTAGCAGGAGAGCCAGTCACTTCCCTCCCC...TTCTTGCTTTGTGTTGTGTTCTGGTAAAGCTTTAAGTGAGTGTCTTACCCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313367.7
CDS-3UTR CCA 90 bp GGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTGCTGTTTGGGCATCCTaGGTACTTCTTGCCCTCAGG +
Preference number: 4 (lower is better)
Translates to: GLCHFRRQAQEKYTNVIFAVWAS*VLLALR
Trigger: CCTGAGGGCAAGAAGTACCCAGGATGCCCAAACAGC...AAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313367.7
CDS-3UTR CCA 90 bp ACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTAACCTGTGCGGCTGTTTaGGCATCCTGGGTACTTCTT +
Preference number: 4 (lower is better)
Translates to: TQVCATSEGKHRRNTLMLTCAAV*ASWVLL
Trigger: AAGAAGTACCCAGGATGCCCAAACAGCCGCACAGGT...TAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313367.7
CDS-3UTR TCA 90 bp CCCAGGGAAGTAAAAATAAACATGCAGACAGCCCTAAAGACATGTTTTCCAGCCCTTTACAGACATCACTaGGAGCCCGACATCAATGCA +
Preference number: 4 (lower is better)
Translates to: PREVKINMQTALKTCFPALYRHH*EPDINA
Trigger: TGCATTGATGTCGGGCTCTCAGTGATGTCTGTAAAG...GGCTGGAAAACATGTCTTTAGGGCTGTCTGCATGTTTATTTTTACTTCCCTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp GCAGGAATCATCATGCAGGTTCTTGATGACAATCTCTCCATAGTGCTCAATCCACTTTACAGACATCACTaGGAGCCCGACATCAATGCA +
Preference number: 4 (lower is better)
Translates to: AGIIMQVLDDNLSIVLNPLYRHH*EPDINA
Trigger: TGCATTGATGTCGGGCTCTCAGTGATGTCTGTAAAG...TGGATTGAGCACTATGGAGAGATTGTCATCAAGAACCTGCATGATGATTCCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp CTTAACTTCTCAAGGACTCAGCTCTCACTAAGGAGAAATTTCCTACTGTCTCTCGTCAAACACCCCAGATaGAGAGTCTGTGATGGTGGA +
Preference number: 4 (lower is better)
Translates to: LNFSRTQLSLRRNFLLSLVKHPR*RVCDGG
Trigger: TCCACCATCACAGACTCTTCATCTGGGGTGTTTGAC...GAGAGACAGTAGGAAATTTCTCCTTAGTGAGAGCTGAGTCCTTGAGAAGTTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313367.7
CDS-3UTR TCA 90 bp ACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTAGTCAAACACCCCAGATaGAGAGTCTGTGATGGTGGA +
Preference number: 4 (lower is better)
Translates to: TQVCATSEGKHRRNTLMLVKHPR*RVCDGG
Trigger: TCCACCATCACAGACTCTTCATCTGGGGTGTTTGAC...TAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp ACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATTTCTAGACTCAGCATaGCACGCAGAGATAGGCGGA +
Preference number: 4 (lower is better)
Translates to: TQVCATSEGKHRRNTLMLFLDSA*HAEIGG
Trigger: TCCGCCTATCTCTGCGTGTCATGCTGAGTCTAGAAA...TAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp CTTAACTTCTCAAGGACTCAGCTCTCACTAAGGAGAAATTTCCTACTGTCTCTCGGTAGTCGACAGCTGTaGCAGGAACATTACCTGAAG +
Preference number: 4 (lower is better)
Translates to: LNFSRTQLSLRRNFLLSLGSRQL*QEHYLK
Trigger: CTTCAGGTAATGTTCCTGTCACAGCTGTCGACTACC...GAGAGACAGTAGGAAATTTCTCCTTAGTGAGAGCTGAGTCCTTGAGAAGTTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313367.7
CDS-3UTR TCA 90 bp GCAGGAATCATCATGCAGGTTCTTGATGACAATCTCTCCATAGTGCTCAATCCAGAAGCCAGACAGCTCTaGGTAATGAACCTGTTTACG +
Preference number: 4 (lower is better)
Translates to: AGIIMQVLDDNLSIVLNPEARQL*VMNLFT
Trigger: CGTAAACAGGTTCATTACTCAGAGCTGTCTGGCTTC...TGGATTGAGCACTATGGAGAGATTGTCATCAAGAACCTGCATGATGATTCCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp AAGATCTTTTCTAAGTTCCAAATAGGTGCCGTTGCTCACCCAAGAGTCATCGTCGAAGCCAGACAGCTCTaGGTAATGAACCTGTTTACG +
Preference number: 4 (lower is better)
Translates to: KIFSKFQIGAVAHPRVIVEARQL*VMNLFT
Trigger: CGTAAACAGGTTCATTACTCAGAGCTGTCTGGCTTC...GACGATGACTCTTGGGTGAGCAACGGCACCTATTTGGAACTTAGAAAAGATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp GGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTAGAGCCCGACATCAATaGAGCCATGCAGCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: GLCHFRRQAQEKYTNVIFRARHQ*SHAASL
Trigger: GAGAGAAGCTGCATGGCTGCATTGATGTCGGGCTCT...AAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp AAATATATAAACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACGCCGAGTATGTCCGATaGAGGACGTCCATGCTTTGC +
Preference number: 4 (lower is better)
Translates to: KYINTGLCHFRRQAQEKYAEYVR*RTSMLC
Trigger: GCAAAGCATGGACGTCCTGCATCGGACATACTCGGC...GTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGTTTATATATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp AAATATATAAACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACGGCGTTGATAGCTGGTaGCGAGTATGTCCGATGCAG +
Preference number: 4 (lower is better)
Translates to: KYINTGLCHFRRQAQEKYGVDSW*RVCPMQ
Trigger: CTGCATCGGACATACTCGGCACCAGCTATCAACGCC...GTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGTTTATATATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp TTCTGTCCACCCAGGGAAGTAAAAATAAACATGCAGACAGCCCTAAAGACATGTTCCTGCTCCATCAGCTaGTTCAGTTTCTCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: FCPPREVKINMQTALKTCSCSIS*FSFSLS
Trigger: GGAGAGAGAGAAACTGAAGCAGCTGATGGAGCAGGA...ACATGTCTTTAGGGCTGTCTGCATGTTTATTTTTACTTCCCTGGGTGGACAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp GCTCAATCCACCTCTGCCCGCTTAAGATGTTATGGATGCAAGAGGTCACTTTGTGAGTCACATGGGTTGTaGCAATTGGAACAATTTCCA +
Preference number: 4 (lower is better)
Translates to: AQSTSARLRCYGCKRSLCESHGL*QLEQFP
Trigger: TGGAAATTGTTCCAATTGGCACAACCCATGTGACTC...ACAAAGTGACCTCTTGCATCCATAACATCTTAAGCGGGCAGAGGTGGATTGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp ACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTACCAAATAGGTGCCGTTaGTCACCCAAGAGTCATCGT +
Preference number: 4 (lower is better)
Translates to: TQVCATSEGKHRRNTLMLPNRCR*SPKSHR
Trigger: ACGATGACTCTTGGGTGAGCAACGGCACCTATTTGG...TAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp ACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTAGTCGACTTCCTTGCTTaGAAGAGCAGCTACTTGTGC +
Preference number: 4 (lower is better)
Translates to: TQVCATSEGKHRRNTLMLVDFLA*KSSYLC
Trigger: GCACAAGTAGCTGCTCTTCCAAGCAAGGAAGTCGAC...TAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp AAACTGGAAGCCCTTGTCCTCCCGAATACATTCATATGTTTCTCCAAGAACCGGTCCTTTCTGAACTGGTaGCTCCTGGGTGTAATTCAT +
Preference number: 4 (lower is better)
Translates to: KLEALVLPNTFICFSKNRSFLNW*LLGVIH
Trigger: ATGAATTACACCCAGGAGCCACCAGTTCAGAAAGGA...CCGGTTCTTGGAGAAACATATGAATGTATTCGGGAGGACAAGGGCTTCCAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp GCAGGAATCATCATGCAGGTTCTTGATGACAATCTCTCCATAGTGCTCAATCCACGATACATTCTGTGGTaGCGAAGTTTCGATACCCAC +
Preference number: 4 (lower is better)
Translates to: AGIIMQVLDDNLSIVLNPRYILW*RSFDTH
Trigger: GTGGGTATCGAAACTTCGCCACCACAGAATGTATCG...TGGATTGAGCACTATGGAGAGATTGTCATCAAGAACCTGCATGATGATTCCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp GCAGGAATCATCATGCAGGTTCTTGATGACAATCTCTCCATAGTGCTCAATCCAAGTGCGCCAGGTCTTTaGAGCATTTTTCCATGTCCT +
Preference number: 4 (lower is better)
Translates to: AGIIMQVLDDNLSIVLNPSAPGL*SIFPCP
Trigger: AGGACATGGAAAAATGCTCCAAAGACCTGGCGCACT...TGGATTGAGCACTATGGAGAGATTGTCATCAAGAACCTGCATGATGATTCCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp GGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTGATGGCGTTGATAGCTaGTGCCGAGTATGTCCGATG +
Preference number: 4 (lower is better)
Translates to: GLCHFRRQAQEKYTNVIFDGVDS*CRVCPM
Trigger: CATCGGACATACTCGGCACCAGCTATCAACGCCATC...AAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp ACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTAAGCAGAGACTCGGCATaGATTCTGCGTAAGCGTTCT +
Preference number: 4 (lower is better)
Translates to: TQVCATSEGKHRRNTLMLSRDSA*ILRKRS
Trigger: AGAACGCTTACGCAGAATCCATGCCGAGTCTCTGCT...TAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409863.5
CDS-3UTR CCA 90 bp GCAGGAATCATCATGCAGGTTCTTGATGACAATCTCTCCATAGTGCTCAATCCAGAGATAGGCGGATGGTaGCTGACCTGTTCTGAAAAA +
Preference number: 4 (lower is better)
Translates to: AGIIMQVLDDNLSIVLNPEIGGW*LTCSEK
Trigger: TTTTTCAGAACAGGTCAGCCACCATCCGCCTATCTC...TGGATTGAGCACTATGGAGAGATTGTCATCAAGAACCTGCATGATGATTCCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp TTCCCTTCCTCTAGAAACCTCTGGTCTGGCCTAAATCGAGTGTCAGTAGGTGGCATGGGTTGTGCCAATTaGAACAATTTCCATGGATTT +
Preference number: 4 (lower is better)
Translates to: FPSSRNLWSGLNRVSVGGMGCAN*NNFHGF
Trigger: AAATCCATGGAAATTGTTCCAATTGGCACAACCCAT...GCCACCTACTGACACTCGATTTAGGCCAGACCAGAGGTTTCTAGAGGAAGGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp AAGATCTTTTCTAAGTTCCAAATAGGTGCCGTTGCTCACCCAAGAGTCATCGTCTCCTCTAGAAACCTCTaGTCTGGCCTAAATCGAGTG +
Preference number: 4 (lower is better)
Translates to: KIFSKFQIGAVAHPRVIVSSRNL*SGLNRV
Trigger: CACTCGATTTAGGCCAGACCAGAGGTTTCTAGAGGA...GACGATGACTCTTGGGTGAGCAACGGCACCTATTTGGAACTTAGAAAAGATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp TTCTGTCCACCCAGGGAAGTAAAAATAAACATGCAGACAGCCCTAAAGACATGTAAAGGTTTCGGGACCTaGATGGCGTTGATAGCTGGT +
Preference number: 4 (lower is better)
Translates to: FCPPREVKINMQTALKTCKGFGT*MALIAG
Trigger: ACCAGCTATCAACGCCATCCAGGTCCCGAAACCTTT...ACATGTCTTTAGGGCTGTCTGCATGTTTATTTTTACTTCCCTGGGTGGACAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409555.5
ENST00000409863.5
CDS-3UTR CCA 90 bp ATAGACTTAAAGAGTTACAATGCTAAGCTAAGCACAAGTGATCATCCTAGAGTAACCGAGGCTGGACAGTaGCAAGGGAAGGCTGACTCC +
Preference number: 4 (lower is better)
Translates to: IDLKSYNAKLSTSDHPRVTEAGQ*QGKADS
Trigger: GGAGTCAGCCTTCCCTTGCCACTGTCCAGCCTCGGT...TACTCTAGGATGATCACTTGTGCTTAGCTTAGCATTGTAACTCTTTAAGTCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409452.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp CTTAACTTCTCAAGGACTCAGCTCTCACTAAGGAGAAATTTCCTACTGTCTCTCCTTTACAGACATCACTaGGAGCCCGACATCAATGCA +
Preference number: 4 (lower is better)
Translates to: LNFSRTQLSLRRNFLLSLLYRHH*EPDINA
Trigger: TGCATTGATGTCGGGCTCTCAGTGATGTCTGTAAAG...GAGAGACAGTAGGAAATTTCTCCTTAGTGAGAGCTGAGTCCTTGAGAAGTTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313367.7
CDS-3UTR TCA 90 bp ACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTACTTTACAGACATCACTaGGAGCCCGACATCAATGCA +
Preference number: 4 (lower is better)
Translates to: TQVCATSEGKHRRNTLMLLYRHH*EPDINA
Trigger: TGCATTGATGTCGGGCTCTCAGTGATGTCTGTAAAG...TAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp AAACTGGAAGCCCTTGTCCTCCCGAATACATTCATATGTTTCTCCAAGAACCGGATGGCAATTTCATTCTaGCGATACATTCTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: KLEALVLPNTFICFSKNRMAISF*RYILWW
Trigger: CCACCACAGAATGTATCGTCAGAATGAAATTGCCAT...CCGGTTCTTGGAGAAACATATGAATGTATTCGGGAGGACAAGGGCTTCCAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp AAGATCTTTTCTAAGTTCCAAATAGGTGCCGTTGCTCACCCAAGAGTCATCGTCTGTGATGGTGGACCCTaGGAAAAAGTGGTTAACTTC +
Preference number: 4 (lower is better)
Translates to: KIFSKFQIGAVAHPRVIVCDGGP*EKVVNF
Trigger: GAAGTTAACCACTTTTTCTCAGGGTCCACCATCACA...GACGATGACTCTTGGGTGAGCAACGGCACCTATTTGGAACTTAGAAAAGATCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp ACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTACAGATGAAGAGTCTGTaGTGGTGGACCCTGAGAAAA +
Preference number: 4 (lower is better)
Translates to: TQVCATSEGKHRRNTLMLQMKSL*WWTLRK
Trigger: TTTTCTCAGGGTCCACCATCACAGACTCTTCATCTG...TAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp GGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTGCTACGCTTCCTACTTaGAATGGAGTCAAACACCCC +
Preference number: 4 (lower is better)
Translates to: GLCHFRRQAQEKYTNVIFATLPT*NGVKHP
Trigger: GGGGTGTTTGACTCCATTTCAAGTAGGAAGCGTAGC...AAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp CCCAGGGAAGTAAAAATAAACATGCAGACAGCCCTAAAGACATGTTTTCCAGCCCAGAAAGGGAGTCAGTaGTGGAGAGTCTACTTTCAT +
Preference number: 4 (lower is better)
Translates to: PREVKINMQTALKTCFPAQKGSQ*WRVYFH
Trigger: ATGAAAGTAGACTCTCCATCACTGACTCCCTTTCTG...GGCTGGAAAACATGTCTTTAGGGCTGTCTGCATGTTTATTTTTACTTCCCTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp AAATATATAAACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACGCTAGATGCATACGCTaGTATGGCAAAGGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: KYINTGLCHFRRQAQEKYARCIR*YGKGCH
Trigger: GTGGCAGCCTTTGCCATATCAGCGTATGCATCTAGC...GTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGTTTATATATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp AAAGGGGTAAGACACTCACTTAAAGCTTTACCAGAACACAACACAAAGCAAGAAGGCTGGTGCTCCACATaGTTTTCTTCTAAGACCCGC +
Preference number: 4 (lower is better)
Translates to: KGVRHSLKALPEHNTKQEGWCST*FSSKTR
Trigger: GCGGGTCTTAGAAGAAAATCATGTGGAGCACCAGCC...TTCTTGCTTTGTGTTGTGTTCTGGTAAAGCTTTAAGTGAGTGTCTTACCCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313367.7
CDS-3UTR TCA 90 bp GGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTACGGAACAATCAAAATaGAACCGGAGGGAACAGGGG +
Preference number: 4 (lower is better)
Translates to: GLCHFRRQAQEKYTNVIFTEQSK*NRREQG
Trigger: CCCCTGTTCCCTCCGGTTTCATTTTGATTGTTCCGT...AAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp TTCTGTCCACCCAGGGAAGTAAAAATAAACATGCAGACAGCCCTAAAGACATGTGAAGCCAGACAGCTCTaGGTAATGAACCTGTTTACG +
Preference number: 4 (lower is better)
Translates to: FCPPREVKINMQTALKTCEARQL*VMNLFT
Trigger: CGTAAACAGGTTCATTACTCAGAGCTGTCTGGCTTC...ACATGTCTTTAGGGCTGTCTGCATGTTTATTTTTACTTCCCTGGGTGGACAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp TTCTGTCCACCCAGGGAAGTAAAAATAAACATGCAGACAGCCCTAAAGACATGTTCCTGTCGACTTCCTTaGTTGGAAGAGCAGCTACTT +
Preference number: 4 (lower is better)
Translates to: FCPPREVKINMQTALKTCSCRLP*LEEQLL
Trigger: AAGTAGCTGCTCTTCCAAGCAAGGAAGTCGACAGGA...ACATGTCTTTAGGGCTGTCTGCATGTTTATTTTTACTTCCCTGGGTGGACAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp TTTCACCATAAGACAGGATGGTCCAGTTTGGAAAAACCAAGATCTTTTCTAAGTGCCGAGTATGTCCGATaGAGGACGTCCATGCTTTGC +
Preference number: 4 (lower is better)
Translates to: FHHKTGWSSLEKPRSFLSAEYVR*RTSMLC
Trigger: GCAAAGCATGGACGTCCTGCATCGGACATACTCGGC...ACTTAGAAAAGATCTTGGTTTTTCCAAACTGGACCATCCTGTCTTATGGTGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp ACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTGGAGTTTTCCTCTaGCAGATTGTCACCCGACTT +
Preference number: 4 (lower is better)
Translates to: TQVCATSEGKHRRNTLMLSGVFL*QIVTRL
Trigger: AAGTCGGGTGACAATCTGGCAGAGGAAAACTCCAGA...TAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409863.5
CDS-3UTR GCA 90 bp TGTTTCTCCAAGAACCGGATTAAATGGCTTGCTTCCAGCTCGGTAGTAGCTAGAGAGTCACATGGGTTGTaGCAATTGGAACAATTTCCA +
Preference number: 4 (lower is better)
Translates to: CFSKNRIKWLASSSVVARESHGL*QLEQFP
Trigger: TGGAAATTGTTCCAATTGGCACAACCCATGTGACTC...TCTAGCTACTACCGAGCTGGAAGCAAGCCATTTAATCCGGTTCTTGGAGAAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp ACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATGCTCAATCCACCTCTaGCCGCTTAAGATGTTATGG +
Preference number: 4 (lower is better)
Translates to: TQVCATSEGKHRRNTLMLCSIHL*PLKMLW
Trigger: CCATAACATCTTAAGCGGGCAGAGGTGGATTGAGCA...TAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp CCCAGGGAAGTAAAAATAAACATGCAGACAGCCCTAAAGACATGTTTTCCAGCCTCCTGTCAAACACTGTaGCTTCAATCTCATGGGCAT +
Preference number: 4 (lower is better)
Translates to: PREVKINMQTALKTCFPASCQTL*LQSHGH
Trigger: ATGCCCATGAGATTGAAGGCACAGTGTTTGACAGGA...GGCTGGAAAACATGTCTTTAGGGCTGTCTGCATGTTTATTTTTACTTCCCTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp GGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTCGCCGCCACAGTAGATaGTTTCATGCCATTTCCCAA +
Preference number: 4 (lower is better)
Translates to: GLCHFRRQAQEKYTNVIFRRHSR*FHAISQ
Trigger: TTGGGAAATGGCATGAAAGCATCTACTGTGGCGGCG...AAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp AAATATATAAACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACCGCCGCCTTTCTCTCTaGAGTTGTTCAATCCTCTGC +
Preference number: 4 (lower is better)
Translates to: KYINTGLCHFRRQAQEKYRRLSL*SCSILC
Trigger: GCAGAGGATTGAACAACTGCAGAGAGAAAGGCGGCG...GTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGTTTATATATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp AAACTGGAAGCCCTTGTCCTCCCGAATACATTCATATGTTTCTCCAAGAACCGGATAAACACAGGTTTGTaGCACTTCAGAAGGCAAGCA +
Preference number: 4 (lower is better)
Translates to: KLEALVLPNTFICFSKNRINTGL*HFRRQA
Trigger: TGCTTGCCTTCTGAAGTGGCACAAACCTGTGTTTAT...CCGGTTCTTGGAGAAACATATGAATGTATTCGGGAGGACAAGGGCTTCCAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp GCAGGAATCATCATGCAGGTTCTTGATGACAATCTCTCCATAGTGCTCAATCCAGGACAGCAAGTCACTTaGCCTCGAGACAATCAAAAT +
Preference number: 4 (lower is better)
Translates to: AGIIMQVLDDNLSIVLNPGQQVT*PRDNQN
Trigger: ATTTTGATTGTCTCGAGGCCAAGTGACTTGCTGTCC...TGGATTGAGCACTATGGAGAGATTGTCATCAAGAACCTGCATGATGATTCCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp TTCTGTCCACCCAGGGAAGTAAAAATAAACATGCAGACAGCCCTAAAGACATGTTCTCATCACTCATCATaGACAGCAAGTCACTTGGCC +
Preference number: 4 (lower is better)
Translates to: FCPPREVKINMQTALKTCSHHSS*TASHLA
Trigger: GGCCAAGTGACTTGCTGTCCATGATGAGTGATGAGA...ACATGTCTTTAGGGCTGTCTGCATGTTTATTTTTACTTCCCTGGGTGGACAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp CCCAGGGAAGTAAAAATAAACATGCAGACAGCCCTAAAGACATGTTTTCCAGCCTCCTTTCTGAACTGGTaGCTCCTGGGTGTAATTCAT +
Preference number: 4 (lower is better)
Translates to: PREVKINMQTALKTCFPASFLNW*LLGVIH
Trigger: ATGAATTACACCCAGGAGCCACCAGTTCAGAAAGGA...GGCTGGAAAACATGTCTTTAGGGCTGTCTGCATGTTTATTTTTACTTCCCTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp ACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTACGATACATTCTGTGGTaGCGAAGTTTCGATACCCAC +
Preference number: 4 (lower is better)
Translates to: TQVCATSEGKHRRNTLMLRYILW*RSFDTH
Trigger: GTGGGTATCGAAACTTCGCCACCACAGAATGTATCG...TAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp CTTAACTTCTCAAGGACTCAGCTCTCACTAAGGAGAAATTTCCTACTGTCTCTCAGTGCGCCAGGTCTTTaGAGCATTTTTCCATGTCCT +
Preference number: 4 (lower is better)
Translates to: LNFSRTQLSLRRNFLLSLSAPGL*SIFPCP
Trigger: AGGACATGGAAAAATGCTCCAAAGACCTGGCGCACT...GAGAGACAGTAGGAAATTTCTCCTTAGTGAGAGCTGAGTCCTTGAGAAGTTAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313367.7
CDS-3UTR CCA 90 bp TTCTGTCCACCCAGGGAAGTAAAAATAAACATGCAGACAGCCCTAAAGACATGTAGTGCGCCAGGTCTTTaGAGCATTTTTCCATGTCCT +
Preference number: 4 (lower is better)
Translates to: FCPPREVKINMQTALKTCSAPGL*SIFPCP
Trigger: AGGACATGGAAAAATGCTCCAAAGACCTGGCGCACT...ACATGTCTTTAGGGCTGTCTGCATGTTTATTTTTACTTCCCTGGGTGGACAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp CCCAGGGAAGTAAAAATAAACATGCAGACAGCCCTAAAGACATGTTTTCCAGCCAAGAACCGGATTAAATaGCTTGCTTCCAGCTCGGTA +
Preference number: 4 (lower is better)
Translates to: PREVKINMQTALKTCFPAKNRIK*LASSSV
Trigger: TACCGAGCTGGAAGCAAGCCATTTAATCCGGTTCTT...GGCTGGAAAACATGTCTTTAGGGCTGTCTGCATGTTTATTTTTACTTCCCTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp ACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTAACTGGCAGAGTCACATaGGTTGTGCCAATTGGAACA +
Preference number: 4 (lower is better)
Translates to: TQVCATSEGKHRRNTLMLTGRVT*VVPIGT
Trigger: TGTTCCAATTGGCACAACCCATGTGACTCTGCCAGT...TAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp TTCTGTCCACCCAGGGAAGTAAAAATAAACATGCAGACAGCCCTAAAGACATGTACTGGCAGAGTCACATaGGTTGTGCCAATTGGAACA +
Preference number: 4 (lower is better)
Translates to: FCPPREVKINMQTALKTCTGRVT*VVPIGT
Trigger: TGTTCCAATTGGCACAACCCATGTGACTCTGCCAGT...ACATGTCTTTAGGGCTGTCTGCATGTTTATTTTTACTTCCCTGGGTGGACAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp TTCTGTCCACCCAGGGAAGTAAAAATAAACATGCAGACAGCCCTAAAGACATGTTCCTCTAGAAACCTCTaGTCTGGCCTAAATCGAGTG +
Preference number: 4 (lower is better)
Translates to: FCPPREVKINMQTALKTCSSRNL*SGLNRV
Trigger: CACTCGATTTAGGCCAGACCAGAGGTTTCTAGAGGA...ACATGTCTTTAGGGCTGTCTGCATGTTTATTTTTACTTCCCTGGGTGGACAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp CTTAACTTCTCAAGGACTCAGCTCTCACTAAGGAGAAATTTCCTACTGTCTCTCGCTCTCCTGCTACACTaGAGACTGTTAGCTCATTTC +
Preference number: 4 (lower is better)
Translates to: LNFSRTQLSLRRNFLLSLALLLH*RLLAHF
Trigger: GAAATGAGCTAACAGTCTCCAGTGTAGCAGGAGAGC...GAGAGACAGTAGGAAATTTCTCCTTAGTGAGAGCTGAGTCCTTGAGAAGTTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313367.7
CDS-3UTR CCA 90 bp CTTGTCCTCCCGAATACATTCATATGTTTCTCCAAGAACCGGATTAAATGGCTTAAAGGTTTCGGGACCTaGATGGCGTTGATAGCTGGT +
Preference number: 4 (lower is better)
Translates to: LVLPNTFICFSKNRIKWLKGFGT*MALIAG
Trigger: ACCAGCTATCAACGCCATCCAGGTCCCGAAACCTTT...AAGCCATTTAATCCGGTTCTTGGAGAAACATATGAATGTATTCGGGAGGACAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409555.5
ENST00000409863.5
CDS-3UTR TCA 90 bp AAAGGGGTAAGACACTCACTTAAAGCTTTACCAGAACACAACACAAAGCAAGAAAGCAAAAATCCTTTCTaGACTGGTGGCTCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: KGVRHSLKALPEHNTKQESKNPF*TGGSWV
Trigger: CACCCAGGAGCCACCAGTTCAGAAAGGATTTTTGCT...TTCTTGCTTTGTGTTGTGTTCTGGTAAAGCTTTAAGTGAGTGTCTTACCCCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000313367.7
CDS-3UTR TCA 90 bp AAATATATAAACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACAGCAAAAATCCTTTCTaGACTGGTGGCTCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: KYINTGLCHFRRQAQEKYSKNPF*TGGSWV
Trigger: CACCCAGGAGCCACCAGTTCAGAAAGGATTTTTGCT...GTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGTTTATATATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp ACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATGTGATGGTGGACCCTaGGAAAAAGTGGTTAACTTC +
Preference number: 4 (lower is better)
Translates to: TQVCATSEGKHRRNTLMLCDGGP*EKVVNF
Trigger: GAAGTTAACCACTTTTTCTCAGGGTCCACCATCACA...TAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp AAATATATAAACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACGTCAAACACCCCAGATaGAGAGTCTGTGATGGTGGA +
Preference number: 4 (lower is better)
Translates to: KYINTGLCHFRRQAQEKYVKHPR*RVCDGG
Trigger: TCCACCATCACAGACTCTTCATCTGGGGTGTTTGAC...GTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGTTTATATATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp ACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTACAGAAAGGGAGTCAGTaGTGGAGAGTCTACTTTCAT +
Preference number: 4 (lower is better)
Translates to: TQVCATSEGKHRRNTLMLQKGSQ*WRVYFH
Trigger: ATGAAAGTAGACTCTCCATCACTGACTCCCTTTCTG...TAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp TTCTGTCCACCCAGGGAAGTAAAAATAAACATGCAGACAGCCCTAAAGACATGTCAGAAAGGGAGTCAGTaGTGGAGAGTCTACTTTCAT +
Preference number: 4 (lower is better)
Translates to: FCPPREVKINMQTALKTCQKGSQ*WRVYFH
Trigger: ATGAAAGTAGACTCTCCATCACTGACTCCCTTTCTG...ACATGTCTTTAGGGCTGTCTGCATGTTTATTTTTACTTCCCTGGGTGGACAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp CACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTCTTCTTTACGGCTGGTGCTCCACATaGTTTTCTTCTAAGACCCGC +
Preference number: 4 (lower is better)
Translates to: HFRRQAQEKYTNVIFLLYGWCST*FSSKTR
Trigger: GCGGGTCTTAGAAGAAAATCATGTGGAGCACCAGCC...GTAAAGAAGAAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp CCCAGGGAAGTAAAAATAAACATGCAGACAGCCCTAAAGACATGTTTTCCAGCCCACATATACCCTGGATaGGAAAAACAGCTCGAGAAA +
Preference number: 4 (lower is better)
Translates to: PREVKINMQTALKTCFPAHIYPG*EKQLEK
Trigger: TTTCTCGAGCTGTTTTTCTCATCCAGGGTATATGTG...GGCTGGAAAACATGTCTTTAGGGCTGTCTGCATGTTTATTTTTACTTCCCTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp ACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTAAAGAGCAGCTACTTGTaGTCCTTGAAGGTGATACCA +
Preference number: 4 (lower is better)
Translates to: TQVCATSEGKHRRNTLMLKSSYL*SLKVIP
Trigger: TGGTATCACCTTCAAGGAGCACAAGTAGCTGCTCTT...TAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp TTCTGTCCACCCAGGGAAGTAAAAATAAACATGCAGACAGCCCTAAAGACATGTAAGAGCAGCTACTTGTaGTCCTTGAAGGTGATACCA +
Preference number: 4 (lower is better)
Translates to: FCPPREVKINMQTALKTCKSSYL*SLKVIP
Trigger: TGGTATCACCTTCAAGGAGCACAAGTAGCTGCTCTT...ACATGTCTTTAGGGCTGTCTGCATGTTTATTTTTACTTCCCTGGGTGGACAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp ATAGACTTAAAGAGTTACAATGCTAAGCTAAGCACAAGTGATCATCCTAGAGTAGGCGTTGATAGCTGGTaGCGAGTATGTCCGATGCAG +
Preference number: 4 (lower is better)
Translates to: IDLKSYNAKLSTSDHPRVGVDSW*RVCPMQ
Trigger: CTGCATCGGACATACTCGGCACCAGCTATCAACGCC...TACTCTAGGATGATCACTTGTGCTTAGCTTAGCATTGTAACTCTTTAAGTCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp AAATATATAAACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACTCCTGCTCCATCAGCTaGTTCAGTTTCTCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: KYINTGLCHFRRQAQEKYSCSIS*FSFSLS
Trigger: GGAGAGAGAGAAACTGAAGCAGCTGATGGAGCAGGA...GTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGTTTATATATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp GGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTTGCTCAATCCACCTCTaGCCGCTTAAGATGTTATGG +
Preference number: 4 (lower is better)
Translates to: GLCHFRRQAQEKYTNVIFCSIHL*PLKMLW
Trigger: CCATAACATCTTAAGCGGGCAGAGGTGGATTGAGCA...AAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp CTTAACTTCTCAAGGACTCAGCTCTCACTAAGGAGAAATTTCCTACTGTCTCTCTCCTGTCAAACACTGTaGCTTCAATCTCATGGGCAT +
Preference number: 4 (lower is better)
Translates to: LNFSRTQLSLRRNFLLSLSCQTL*LQSHGH
Trigger: ATGCCCATGAGATTGAAGGCACAGTGTTTGACAGGA...GAGAGACAGTAGGAAATTTCTCCTTAGTGAGAGCTGAGTCCTTGAGAAGTTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313367.7
CDS-3UTR GCA 90 bp AAATATATAAACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACCGCCGCCACAGTAGATaGTTTCATGCCATTTCCCAA +
Preference number: 4 (lower is better)
Translates to: KYINTGLCHFRRQAQEKYRRHSR*FHAISQ
Trigger: TTGGGAAATGGCATGAAAGCATCTACTGTGGCGGCG...GTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGTTTATATATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp AAATATATAAACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACGTCCCCAGTGGCAGGTaGTTTAGCTCTTATCCAAAG +
Preference number: 4 (lower is better)
Translates to: KYINTGLCHFRRQAQEKYVPSGR*FSSYPK
Trigger: CTTTGGATAAGAGCTAAACCACCTGCCACTGGGGAC...GTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGTTTATATATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313367.7
ENST00000396431.5
CDS-3UTR CCA 90 bp ACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTAGGACAGCAAGTCACTTaGCCTCGAGACAATCAAAAT +
Preference number: 4 (lower is better)
Translates to: TQVCATSEGKHRRNTLMLGQQVT*PRDNQN
Trigger: ATTTTGATTGTCTCGAGGCCAAGTGACTTGCTGTCC...TAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp GGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTTCTCATCACTCATCATaGACAGCAAGTCACTTGGCC +
Preference number: 4 (lower is better)
Translates to: GLCHFRRQAQEKYTNVIFSHHSS*TASHLA
Trigger: GGCCAAGTGACTTGCTGTCCATGATGAGTGATGAGA...AAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp AAATATATAAACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACGTCGACTTCCTTGCTTaGAAGAGCAGCTACTTGTGC +
Preference number: 4 (lower is better)
Translates to: KYINTGLCHFRRQAQEKYVDFLA*KSSYLC
Trigger: GCACAAGTAGCTGCTCTTCCAAGCAAGGAAGTCGAC...GTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGTTTATATATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp GGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTCGATACATTCTGTGGTaGCGAAGTTTCGATACCCAC +
Preference number: 4 (lower is better)
Translates to: GLCHFRRQAQEKYTNVIFRYILW*RSFDTH
Trigger: GTGGGTATCGAAACTTCGCCACCACAGAATGTATCG...AAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp ACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTAGCTTCCTACTTGAAATaGAGTCAAACACCCCAGATG +
Preference number: 4 (lower is better)
Translates to: TQVCATSEGKHRRNTLMLASYLK*SQTPQM
Trigger: CATCTGGGGTGTTTGACTCCATTTCAAGTAGGAAGC...TAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp GGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTAGTGCGCCAGGTCTTTaGAGCATTTTTCCATGTCCT +
Preference number: 4 (lower is better)
Translates to: GLCHFRRQAQEKYTNVIFSAPGL*SIFPCP
Trigger: AGGACATGGAAAAATGCTCCAAAGACCTGGCGCACT...AAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp AAATATATAAACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACAGCAGAGACTCGGCATaGATTCTGCGTAAGCGTTCT +
Preference number: 4 (lower is better)
Translates to: KYINTGLCHFRRQAQEKYSRDSA*ILRKRS
Trigger: AGAACGCTTACGCAGAATCCATGCCGAGTCTCTGCT...GTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGTTTATATATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409863.5
CDS-3UTR CCA 90 bp GGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTGAGATAGGCGGATGGTaGCTGACCTGTTCTGAAAAA +
Preference number: 4 (lower is better)
Translates to: GLCHFRRQAQEKYTNVIFEIGGW*LTCSEK
Trigger: TTTTTCAGAACAGGTCAGCCACCATCCGCCTATCTC...AAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp CACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTCTTCTTTACGCAGAGATAGGCGGATaGTGGCTGACCTGTTCTGAA +
Preference number: 4 (lower is better)
Translates to: HFRRQAQEKYTNVIFLLYAEIGG*WLTCSE
Trigger: TTCAGAACAGGTCAGCCACCATCCGCCTATCTCTGC...GTAAAGAAGAAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp GGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTACTGGCAGAGTCACATaGGTTGTGCCAATTGGAACA +
Preference number: 4 (lower is better)
Translates to: GLCHFRRQAQEKYTNVIFTGRVT*VVPIGT
Trigger: TGTTCCAATTGGCACAACCCATGTGACTCTGCCAGT...AAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp AAATATATAAACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACTGGGTAGCTTACGCATaGGTGAGTAACCCTGGGAAT +
Preference number: 4 (lower is better)
Translates to: KYINTGLCHFRRQAQEKYWVAYA*VSNPGN
Trigger: ATTCCCAGGGTTACTCACCCATGCGTAAGCTACCCA...GTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGTTTATATATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313367.7
CDS-3UTR TCA 90 bp AAAGGGGTAAGACACTCACTTAAAGCTTTACCAGAACACAACACAAAGCAAGAACAAAATGCCATCAGATaGCAAGGGAGCCGAGAGTAT +
Preference number: 4 (lower is better)
Translates to: KGVRHSLKALPEHNTKQEQNAIR*QGSREY
Trigger: ATACTCTCGGCTCCCTTGTCATCTGATGGCATTTTG...TTCTTGCTTTGTGTTGTGTTCTGGTAAAGCTTTAAGTGAGTGTCTTACCCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313367.7
CDS-3UTR TCA 90 bp TTTCACCATAAGACAGGATGGTCCAGTTTGGAAAAACCAAGATCTTTTCTAAGTAGCAAAAATCCTTTCTaGACTGGTGGCTCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: FHHKTGWSSLEKPRSFLSSKNPF*TGGSWV
Trigger: CACCCAGGAGCCACCAGTTCAGAAAGGATTTTTGCT...ACTTAGAAAAGATCTTGGTTTTTCCAAACTGGACCATCCTGTCTTATGGTGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp GCAGGAATCATCATGCAGGTTCTTGATGACAATCTCTCCATAGTGCTCAATCCAATCAAAGACTTCTTCTaGCTTGACCTTCAGATGGTA +
Preference number: 4 (lower is better)
Translates to: AGIIMQVLDDNLSIVLNPIKDFF*LDLQMV
Trigger: TACCATCTGAAGGTCAAGTCAGAAGAAGTCTTTGAT...TGGATTGAGCACTATGGAGAGATTGTCATCAAGAACCTGCATGATGATTCCTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp CTTAACTTCTCAAGGACTCAGCTCTCACTAAGGAGAAATTTCCTACTGTCTCTCATGGCAATTTCATTCTaGCGATACATTCTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: LNFSRTQLSLRRNFLLSLMAISF*RYILWW
Trigger: CCACCACAGAATGTATCGTCAGAATGAAATTGCCAT...GAGAGACAGTAGGAAATTTCTCCTTAGTGAGAGCTGAGTCCTTGAGAAGTTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313367.7
CDS-3UTR TCA 90 bp GGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTTGTGATGGTGGACCCTaGGAAAAAGTGGTTAACTTC +
Preference number: 4 (lower is better)
Translates to: GLCHFRRQAQEKYTNVIFCDGGP*EKVVNF
Trigger: GAAGTTAACCACTTTTTCTCAGGGTCCACCATCACA...AAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp AAATATATAAACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACCAGATGAAGAGTCTGTaGTGGTGGACCCTGAGAAAA +
Preference number: 4 (lower is better)
Translates to: KYINTGLCHFRRQAQEKYQMKSL*WWTLRK
Trigger: TTTTCTCAGGGTCCACCATCACAGACTCTTCATCTG...GTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGTTTATATATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp CACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTCTTCTTTACGTCAAACACCCCAGATaGAGAGTCTGTGATGGTGGA +
Preference number: 4 (lower is better)
Translates to: HFRRQAQEKYTNVIFLLYVKHPR*RVCDGG
Trigger: TCCACCATCACAGACTCTTCATCTGGGGTGTTTGAC...GTAAAGAAGAAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp CACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTCTTCTTTACGCTACGCTTCCTACTTaGAATGGAGTCAAACACCCC +
Preference number: 4 (lower is better)
Translates to: HFRRQAQEKYTNVIFLLYATLPT*NGVKHP
Trigger: GGGGTGTTTGACTCCATTTCAAGTAGGAAGCGTAGC...GTAAAGAAGAAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp TTTCACCATAAGACAGGATGGTCCAGTTTGGAAAAACCAAGATCTTTTCTAAGTGCTACGCTTCCTACTTaGAATGGAGTCAAACACCCC +
Preference number: 4 (lower is better)
Translates to: FHHKTGWSSLEKPRSFLSATLPT*NGVKHP
Trigger: GGGGTGTTTGACTCCATTTCAAGTAGGAAGCGTAGC...ACTTAGAAAAGATCTTGGTTTTTCCAAACTGGACCATCCTGTCTTATGGTGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp AAACTGGAAGCCCTTGTCCTCCCGAATACATTCATATGTTTCTCCAAGAACCGGACTTTATGGGCAATATaGCACAGATCTTCTTGCATT +
Preference number: 4 (lower is better)
Translates to: KLEALVLPNTFICFSKNRTLWAI*HRSSCI
Trigger: AATGCAAGAAGATCTGTGTCATATTGCCCATAAAGT...CCGGTTCTTGGAGAAACATATGAATGTATTCGGGAGGACAAGGGCTTCCAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp TGTTTCTCCAAGAACCGGATTAAATGGCTTGCTTCCAGCTCGGTAGTAGCTAGAAAGCTGACCTTAAAGTaGAGTAAACTTTATGGGCAA +
Preference number: 4 (lower is better)
Translates to: CFSKNRIKWLASSSVVARKLTLK*SKLYGQ
Trigger: TTGCCCATAAAGTTTACTTCACTTTAAGGTCAGCTT...TCTAGCTACTACCGAGCTGGAAGCAAGCCATTTAATCCGGTTCTTGGAGAAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp GGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTCAGAAAGGGAGTCAGTaGTGGAGAGTCTACTTTCAT +
Preference number: 4 (lower is better)
Translates to: GLCHFRRQAQEKYTNVIFQKGSQ*WRVYFH
Trigger: ATGAAAGTAGACTCTCCATCACTGACTCCCTTTCTG...AAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp ATAGACTTAAAGAGTTACAATGCTAAGCTAAGCACAAGTGATCATCCTAGAGTAGCTAGATGCATACGCTaGTATGGCAAAGGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: IDLKSYNAKLSTSDHPRVARCIR*YGKGCH
Trigger: GTGGCAGCCTTTGCCATATCAGCGTATGCATCTAGC...TACTCTAGGATGATCACTTGTGCTTAGCTTAGCATTGTAACTCTTTAAGTCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp AAAGGGGTAAGACACTCACTTAAAGCTTTACCAGAACACAACACAAAGCAAGAACCAGCGCAAACTGTGTaGAGCTATAGTATTGCTCGT +
Preference number: 4 (lower is better)
Translates to: KGVRHSLKALPEHNTKQEPAQTV*SYSIAR
Trigger: ACGAGCAATACTATAGCTTCACACAGTTTGCGCTGG...TTCTTGCTTTGTGTTGTGTTCTGGTAAAGCTTTAAGTGAGTGTCTTACCCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313367.7
CDS-3UTR TCA 90 bp AAATATATAAACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACCCAGCGCAAACTGTGTaGAGCTATAGTATTGCTCGT +
Preference number: 4 (lower is better)
Translates to: KYINTGLCHFRRQAQEKYPAQTV*SYSIAR
Trigger: ACGAGCAATACTATAGCTTCACACAGTTTGCGCTGG...GTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGTTTATATATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp CTTAACTTCTCAAGGACTCAGCTCTCACTAAGGAGAAATTTCCTACTGTCTCTCTTGGTTCTTCCCAAATaGTGCCACGTTTCTGTTTTC +
Preference number: 4 (lower is better)
Translates to: LNFSRTQLSLRRNFLLSLLVLPK*CHVSVF
Trigger: GAAAACAGAAACGTGGCATCATTTGGGAAGAACCAA...GAGAGACAGTAGGAAATTTCTCCTTAGTGAGAGCTGAGTCCTTGAGAAGTTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313367.7
CDS-3UTR TCA 90 bp ATAGACTTAAAGAGTTACAATGCTAAGCTAAGCACAAGTGATCATCCTAGAGTATCTGGAGTTTTCGGATaGCAGGGCGTTCTTCAGACC +
Preference number: 4 (lower is better)
Translates to: IDLKSYNAKLSTSDHPRVSGVFG*QGVLQT
Trigger: GGTCTGAAGAACGCCCTGTCATCCGAAAACTCCAGA...TACTCTAGGATGATCACTTGTGCTTAGCTTAGCATTGTAACTCTTTAAGTCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409759.5
CDS-3UTR GCA 90 bp CTTAACTTCTCAAGGACTCAGCTCTCACTAAGGAGAAATTTCCTACTGTCTCTCTCGAGACAATCAAAATaGCATCAGATGACAAGGGAG +
Preference number: 4 (lower is better)
Translates to: LNFSRTQLSLRRNFLLSLSRQSK*HQMTRE
Trigger: CTCCCTTGTCATCTGATGGCATTTTGATTGTCTCGA...GAGAGACAGTAGGAAATTTCTCCTTAGTGAGAGCTGAGTCCTTGAGAAGTTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313367.7
CDS-3UTR GCA 90 bp AAATATATAAACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACTCCTGTCGACTTCCTTaGTTGGAAGAGCAGCTACTT +
Preference number: 4 (lower is better)
Translates to: KYINTGLCHFRRQAQEKYSCRLP*LEEQLL
Trigger: AAGTAGCTGCTCTTCCAAGCAAGGAAGTCGACAGGA...GTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGTTTATATATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp ATAGACTTAAAGAGTTACAATGCTAAGCTAAGCACAAGTGATCATCCTAGAGTAAGAGCCCGACATCAATaGAGCCATGCAGCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: IDLKSYNAKLSTSDHPRVRARHQ*SHAASL
Trigger: GAGAGAAGCTGCATGGCTGCATTGATGTCGGGCTCT...TACTCTAGGATGATCACTTGTGCTTAGCTTAGCATTGTAACTCTTTAAGTCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp TGTTTCTCCAAGAACCGGATTAAATGGCTTGCTTCCAGCTCGGTAGTAGCTAGATCTGCTTTGATATACTaGTACGCTTCCTACTTGAAA +
Preference number: 4 (lower is better)
Translates to: CFSKNRIKWLASSSVVARSALIY*YASYLK
Trigger: TTTCAAGTAGGAAGCGTAGCAGTATATCAAAGCAGA...TCTAGCTACTACCGAGCTGGAAGCAAGCCATTTAATCCGGTTCTTGGAGAAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp CTTGTCCTCCCGAATACATTCATATGTTTCTCCAAGAACCGGATTAAATGGCTTAAAGGTTTCGGGACCTaGAGTGTTCCTTTAGCATCT +
Preference number: 4 (lower is better)
Translates to: LVLPNTFICFSKNRIKWLKGFGT*SVPLAS
Trigger: AGATGCTAAAGGAACACTGCAGGTCCCGAAACCTTT...AAGCCATTTAATCCGGTTCTTGGAGAAACATATGAATGTATTCGGGAGGACAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409452.5
ENST00000409759.5
CDS-3UTR GCA 90 bp AAACTGGAAGCCCTTGTCCTCCCGAATACATTCATATGTTTCTCCAAGAACCGGCAATTTCCATGGATTTaGCCCAGAATTTGTTTTTCC +
Preference number: 4 (lower is better)
Translates to: KLEALVLPNTFICFSKNRQFPWI*PRICFS
Trigger: GGAAAAACAAATTCTGGGGCAAATCCATGGAAATTG...CCGGTTCTTGGAGAAACATATGAATGTATTCGGGAGGACAAGGGCTTCCAGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp GGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTTCCTGTCAAACACTGTaGCTTCAATCTCATGGGCAT +
Preference number: 4 (lower is better)
Translates to: GLCHFRRQAQEKYTNVIFSCQTL*LQSHGH
Trigger: ATGCCCATGAGATTGAAGGCACAGTGTTTGACAGGA...AAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp TTTCACCATAAGACAGGATGGTCCAGTTTGGAAAAACCAAGATCTTTTCTAAGTCCAAATAGGTGCCGTTaGTCACCCAAGAGTCATCGT +
Preference number: 4 (lower is better)
Translates to: FHHKTGWSSLEKPRSFLSPNRCR*SPKSHR
Trigger: ACGATGACTCTTGGGTGAGCAACGGCACCTATTTGG...ACTTAGAAAAGATCTTGGTTTTTCCAAACTGGACCATCCTGTCTTATGGTGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp AAAGGGGTAAGACACTCACTTAAAGCTTTACCAGAACACAACACAAAGCAAGAAGAACATTACCTGAAGTaGAGGGTGGTTACCTGCACA +
Preference number: 4 (lower is better)
Translates to: KGVRHSLKALPEHNTKQEEHYLK*RVVTCT
Trigger: TGTGCAGGTAACCACCCTGCACTTCAGGTAATGTTC...TTCTTGCTTTGTGTTGTGTTCTGGTAAAGCTTTAAGTGAGTGTCTTACCCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313367.7
CDS-3UTR GCA 90 bp CACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTCTTCTTTACATCCTGGGTACTTCTTaGCCTCAGGTGAACTCCCAT +
Preference number: 4 (lower is better)
Translates to: HFRRQAQEKYTNVIFLLYILGTS*PQVNSH
Trigger: ATGGGAGTTCACCTGAGGGCAAGAAGTACCCAGGAT...GTAAAGAAGAAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313367.7
CDS-3UTR CCA 90 bp CACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTCTTCTTTACGTCCCCAGTGGCAGGTaGTTTAGCTCTTATCCAAAG +
Preference number: 4 (lower is better)
Translates to: HFRRQAQEKYTNVIFLLYVPSGR*FSSYPK
Trigger: CTTTGGATAAGAGCTAAACCACCTGCCACTGGGGAC...GTAAAGAAGAAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313367.7
ENST00000396431.5
CDS-3UTR CCA 90 bp GGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTTCCTTTCTGAACTGGTaGCTCCTGGGTGTAATTCAT +
Preference number: 4 (lower is better)
Translates to: GLCHFRRQAQEKYTNVIFSFLNW*LLGVIH
Trigger: ATGAATTACACCCAGGAGCCACCAGTTCAGAAAGGA...AAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp CTTAACTTCTCAAGGACTCAGCTCTCACTAAGGAGAAATTTCCTACTGTCTCTCAAATCCTTTCTGAACTaGTGGCTCCTGGGTGTAATT +
Preference number: 4 (lower is better)
Translates to: LNFSRTQLSLRRNFLLSLKSFLN*WLLGVI
Trigger: AATTACACCCAGGAGCCACCAGTTCAGAAAGGATTT...GAGAGACAGTAGGAAATTTCTCCTTAGTGAGAGCTGAGTCCTTGAGAAGTTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313367.7
CDS-3UTR CCA 90 bp ACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTAAAATCCTTTCTGAACTaGTGGCTCCTGGGTGTAATT +
Preference number: 4 (lower is better)
Translates to: TQVCATSEGKHRRNTLMLKSFLN*WLLGVI
Trigger: AATTACACCCAGGAGCCACCAGTTCAGAAAGGATTT...TAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp CCCAGGGAAGTAAAAATAAACATGCAGACAGCCCTAAAGACATGTTTTCCAGCCCTCTCTATATCGGTTTaGCTCTTGGCATATTTCAAG +
Preference number: 4 (lower is better)
Translates to: PREVKINMQTALKTCFPALSISV*LLAYFK
Trigger: CTTGAAATATGCCAAGAGCCAAACCGATATAGAGAG...GGCTGGAAAACATGTCTTTAGGGCTGTCTGCATGTTTATTTTTACTTCCCTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp GCAGGAATCATCATGCAGGTTCTTGATGACAATCTCTCCATAGTGCTCAATCCAGACCCTGAGAAAAAGTaGTTAACTTCATGTGGAAAC +
Preference number: 4 (lower is better)
Translates to: AGIIMQVLDDNLSIVLNPDPEKK*LTSCGN
Trigger: GTTTCCACATGAAGTTAACCACTTTTTCTCAGGGTC...TGGATTGAGCACTATGGAGAGATTGTCATCAAGAACCTGCATGATGATTCCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp GGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTGCTTCCTACTTGAAATaGAGTCAAACACCCCAGATG +
Preference number: 4 (lower is better)
Translates to: GLCHFRRQAQEKYTNVIFASYLK*SQTPQM
Trigger: CATCTGGGGTGTTTGACTCCATTTCAAGTAGGAAGC...AAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp AAATATATAAACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACTCAAAAGATCCACCCTaGATGGCGTTGATAGCTGGT +
Preference number: 4 (lower is better)
Translates to: KYINTGLCHFRRQAQEKYSKDPP*MALIAG
Trigger: ACCAGCTATCAACGCCATCCAGGGTGGATCTTTTGA...GTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGTTTATATATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313367.7
ENST00000409452.5
ENST00000409759.5
CDS-3UTR CCA 90 bp CACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTCTTCTTTACAGCAGAGACTCGGCATaGATTCTGCGTAAGCGTTCT +
Preference number: 4 (lower is better)
Translates to: HFRRQAQEKYTNVIFLLYSRDSA*ILRKRS
Trigger: AGAACGCTTACGCAGAATCCATGCCGAGTCTCTGCT...GTAAAGAAGAAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409863.5
CDS-3UTR CCA 90 bp CTTAACTTCTCAAGGACTCAGCTCTCACTAAGGAGAAATTTCCTACTGTCTCTCATGCATACGCTGATATaGCAAAGGCTGCCACATATA +
Preference number: 4 (lower is better)
Translates to: LNFSRTQLSLRRNFLLSLMHTLI*QRLPHI
Trigger: TATATGTGGCAGCCTTTGCCATATCAGCGTATGCAT...GAGAGACAGTAGGAAATTTCTCCTTAGTGAGAGCTGAGTCCTTGAGAAGTTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313367.7
CDS-3UTR CCA 90 bp CTTGTCCTCCCGAATACATTCATATGTTTCTCCAAGAACCGGATTAAATGGCTTAAGAACCGGATTAAATaGCTTGCTTCCAGCTCGGTA +
Preference number: 4 (lower is better)
Translates to: LVLPNTFICFSKNRIKWLKNRIK*LASSSV
Trigger: TACCGAGCTGGAAGCAAGCCATTTAATCCGGTTCTT...AAGCCATTTAATCCGGTTCTTGGAGAAACATATGAATGTATTCGGGAGGACAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp GGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTAAGAACCGGATTAAATaGCTTGCTTCCAGCTCGGTA +
Preference number: 4 (lower is better)
Translates to: GLCHFRRQAQEKYTNVIFKNRIK*LASSSV
Trigger: TACCGAGCTGGAAGCAAGCCATTTAATCCGGTTCTT...AAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp ATAGACTTAAAGAGTTACAATGCTAAGCTAAGCACAAGTGATCATCCTAGAGTAGCAGAGATAGGCGGATaGTGGCTGACCTGTTCTGAA +
Preference number: 4 (lower is better)
Translates to: IDLKSYNAKLSTSDHPRVAEIGG*WLTCSE
Trigger: TTCAGAACAGGTCAGCCACCATCCGCCTATCTCTGC...TACTCTAGGATGATCACTTGTGCTTAGCTTAGCATTGTAACTCTTTAAGTCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp GGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTATGATCCCCAAAAACTaGCAGAGTCACATGGGTTGT +
Preference number: 4 (lower is better)
Translates to: GLCHFRRQAQEKYTNVIFMIPKN*QSHMGC
Trigger: ACAACCCATGTGACTCTGCCAGTTTTTGGGGATCAT...AAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp GGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTAGGCAGAGGTATGGATaGAAGGGTGGGATTAAAACA +
Preference number: 4 (lower is better)
Translates to: GLCHFRRQAQEKYTNVIFRQRYG*KGGIKT
Trigger: TGTTTTAATCCCACCCTTCCATCCATACCTCTGCCT...AAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313367.7
CDS-3UTR CCA 90 bp CACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTCTTCTTTACAAAGGTTTCGGGACCTaGATGGCGTTGATAGCTGGT +
Preference number: 4 (lower is better)
Translates to: HFRRQAQEKYTNVIFLLYKGFGT*MALIAG
Trigger: ACCAGCTATCAACGCCATCCAGGTCCCGAAACCTTT...GTAAAGAAGAAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396431.5
ENST00000409555.5
ENST00000409863.5
CDS-3UTR CCA 90 bp AAATATATAAACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACCTCGGTTTTCATCTCTaGAGTTTTCGGATGACAGGG +
Preference number: 4 (lower is better)
Translates to: KYINTGLCHFRRQAQEKYLGFHL*SFRMTG
Trigger: CCCTGTCATCCGAAAACTCCAGAGATGAAAACCGAG...GTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGTTTATATATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409555.5
ENST00000409759.5
CDS-3UTR TCA 90 bp CACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTCTTCTTTACCAAAATGCCATCAGATaGCAAGGGAGCCGAGAGTAT +
Preference number: 4 (lower is better)
Translates to: HFRRQAQEKYTNVIFLLYQNAIR*QGSREY
Trigger: ATACTCTCGGCTCCCTTGTCATCTGATGGCATTTTG...GTAAAGAAGAAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp ACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTAATCAAAGACTTCTTCTaGCTTGACCTTCAGATGGTA +
Preference number: 4 (lower is better)
Translates to: TQVCATSEGKHRRNTLMLIKDFF*LDLQMV
Trigger: TACCATCTGAAGGTCAAGTCAGAAGAAGTCTTTGAT...TAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp CTTGTCCTCCCGAATACATTCATATGTTTCTCCAAGAACCGGATTAAATGGCTTATGGCAATTTCATTCTaGCGATACATTCTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: LVLPNTFICFSKNRIKWLMAISF*RYILWW
Trigger: CCACCACAGAATGTATCGTCAGAATGAAATTGCCAT...AAGCCATTTAATCCGGTTCTTGGAGAAACATATGAATGTATTCGGGAGGACAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp ATAGACTTAAAGAGTTACAATGCTAAGCTAAGCACAAGTGATCATCCTAGAGTAGTCAAACACCCCAGATaGAGAGTCTGTGATGGTGGA +
Preference number: 4 (lower is better)
Translates to: IDLKSYNAKLSTSDHPRVVKHPR*RVCDGG
Trigger: TCCACCATCACAGACTCTTCATCTGGGGTGTTTGAC...TACTCTAGGATGATCACTTGTGCTTAGCTTAGCATTGTAACTCTTTAAGTCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp ATAGACTTAAAGAGTTACAATGCTAAGCTAAGCACAAGTGATCATCCTAGAGTAGCTACGCTTCCTACTTaGAATGGAGTCAAACACCCC +
Preference number: 4 (lower is better)
Translates to: IDLKSYNAKLSTSDHPRVATLPT*NGVKHP
Trigger: GGGGTGTTTGACTCCATTTCAAGTAGGAAGCGTAGC...TACTCTAGGATGATCACTTGTGCTTAGCTTAGCATTGTAACTCTTTAAGTCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp CCCAGGGAAGTAAAAATAAACATGCAGACAGCCCTAAAGACATGTTTTCCAGCCACTTTATGGGCAATATaGCACAGATCTTCTTGCATT +
Preference number: 4 (lower is better)
Translates to: PREVKINMQTALKTCFPATLWAI*HRSSCI
Trigger: AATGCAAGAAGATCTGTGTCATATTGCCCATAAAGT...GGCTGGAAAACATGTCTTTAGGGCTGTCTGCATGTTTATTTTTACTTCCCTGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp AAGATCTTTTCTAAGTTCCAAATAGGTGCCGTTGCTCACCCAAGAGTCATCGTCAAGCTGACCTTAAAGTaGAGTAAACTTTATGGGCAA +
Preference number: 4 (lower is better)
Translates to: KIFSKFQIGAVAHPRVIVKLTLK*SKLYGQ
Trigger: TTGCCCATAAAGTTTACTTCACTTTAAGGTCAGCTT...GACGATGACTCTTGGGTGAGCAACGGCACCTATTTGGAACTTAGAAAAGATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp AAATATATAAACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACCAGAAAGGGAGTCAGTaGTGGAGAGTCTACTTTCAT +
Preference number: 4 (lower is better)
Translates to: KYINTGLCHFRRQAQEKYQKGSQ*WRVYFH
Trigger: ATGAAAGTAGACTCTCCATCACTGACTCCCTTTCTG...GTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGTTTATATATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp AAGATCTTTTCTAAGTTCCAAATAGGTGCCGTTGCTCACCCAAGAGTCATCGTCTATGTCACTGACATATaGGTCATCATCAGAAATCTC +
Preference number: 4 (lower is better)
Translates to: KIFSKFQIGAVAHPRVIVYVTDI*VIIRNL
Trigger: GAGATTTCTGATGATGACTCATATGTCAGTGACATA...GACGATGACTCTTGGGTGAGCAACGGCACCTATTTGGAACTTAGAAAAGATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp GCAGGAATCATCATGCAGGTTCTTGATGACAATCTCTCCATAGTGCTCAATCCATATCACTTATGTCACTaGCATATGAGTCATCATCAG +
Preference number: 4 (lower is better)
Translates to: AGIIMQVLDDNLSIVLNPYHLCH*HMSHHQ
Trigger: CTGATGATGACTCATATGTCAGTGACATAAGTGATA...TGGATTGAGCACTATGGAGAGATTGTCATCAAGAACCTGCATGATGATTCCTGC
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp ATAGACTTAAAGAGTTACAATGCTAAGCTAAGCACAAGTGATCATCCTAGAGTATTTCTAGACTCAGCATaGCACGCAGAGATAGGCGGA +
Preference number: 4 (lower is better)
Translates to: IDLKSYNAKLSTSDHPRVFLDSA*HAEIGG
Trigger: TCCGCCTATCTCTGCGTGTCATGCTGAGTCTAGAAA...TACTCTAGGATGATCACTTGTGCTTAGCTTAGCATTGTAACTCTTTAAGTCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp CACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTCTTCTTTACCCAGCGCAAACTGTGTaGAGCTATAGTATTGCTCGT +
Preference number: 4 (lower is better)
Translates to: HFRRQAQEKYTNVIFLLYPAQTV*SYSIAR
Trigger: ACGAGCAATACTATAGCTTCACACAGTTTGCGCTGG...GTAAAGAAGAAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp CTTAACTTCTCAAGGACTCAGCTCTCACTAAGGAGAAATTTCCTACTGTCTCTCCAGAATTGTTCTGTATaGGCAATTCAAGAGCTGTCT +
Preference number: 4 (lower is better)
Translates to: LNFSRTQLSLRRNFLLSLQNCSV*AIQELS
Trigger: AGACAGCTCTTGAATTGCTCATACAGAACAATTCTG...GAGAGACAGTAGGAAATTTCTCCTTAGTGAGAGCTGAGTCCTTGAGAAGTTAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313367.7
CDS-3UTR TCA 90 bp GGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTTTGCAGATATTTACATaGCGCAGGTTTCCAACACAG +
Preference number: 4 (lower is better)
Translates to: GLCHFRRQAQEKYTNVIFLQIFT*RRFPTQ
Trigger: CTGTGTTGGAAACCTGCGTCATGTAAATATCTGCAA...AAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313367.7
CDS-3UTR TCA 90 bp GGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTCACATATACCCTGGATaGGAAAAACAGCTCGAGAAA +
Preference number: 4 (lower is better)
Translates to: GLCHFRRQAQEKYTNVIFHIYPG*EKQLEK
Trigger: TTTCTCGAGCTGTTTTTCTCATCCAGGGTATATGTG...AAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp GGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTTCGAGACAATCAAAATaGCATCAGATGACAAGGGAG +
Preference number: 4 (lower is better)
Translates to: GLCHFRRQAQEKYTNVIFSRQSK*HQMTRE
Trigger: CTCCCTTGTCATCTGATGGCATTTTGATTGTCTCGA...AAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp ATAGACTTAAAGAGTTACAATGCTAAGCTAAGCACAAGTGATCATCCTAGAGTATCCTGCTCCATCAGCTaGTTCAGTTTCTCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: IDLKSYNAKLSTSDHPRVSCSIS*FSFSLS
Trigger: GGAGAGAGAGAAACTGAAGCAGCTGATGGAGCAGGA...TACTCTAGGATGATCACTTGTGCTTAGCTTAGCATTGTAACTCTTTAAGTCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp CCCAGGGAAGTAAAAATAAACATGCAGACAGCCCTAAAGACATGTTTTCCAGCCCAATTTCCATGGATTTaGCCCAGAATTTGTTTTTCC +
Preference number: 4 (lower is better)
Translates to: PREVKINMQTALKTCFPAQFPWI*PRICFS
Trigger: GGAAAAACAAATTCTGGGGCAAATCCATGGAAATTG...GGCTGGAAAACATGTCTTTAGGGCTGTCTGCATGTTTATTTTTACTTCCCTGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp AAACTGGAAGCCCTTGTCCTCCCGAATACATTCATATGTTTCTCCAAGAACCGGAGTTGTTCAATCCTCTaGTTTTGTATTTCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: KLEALVLPNTFICFSKNRSCSIL*FCISAS
Trigger: AGAAGCTGAAATACAAAAGCAGAGGATTGAACAACT...CCGGTTCTTGGAGAAACATATGAATGTATTCGGGAGGACAAGGGCTTCCAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp ATAGACTTAAAGAGTTACAATGCTAAGCTAAGCACAAGTGATCATCCTAGAGTACCAAATAGGTGCCGTTaGTCACCCAAGAGTCATCGT +
Preference number: 4 (lower is better)
Translates to: IDLKSYNAKLSTSDHPRVPNRCR*SPKSHR
Trigger: ACGATGACTCTTGGGTGAGCAACGGCACCTATTTGG...TACTCTAGGATGATCACTTGTGCTTAGCTTAGCATTGTAACTCTTTAAGTCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp AAATATATAAACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACCTTAAATCTACAGCCTaGTTCCTCATGTCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: KYINTGLCHFRRQAQEKYLKSTA*FLMSVS
Trigger: GCTCACAGACATGAGGAAGCAGGCTGTAGATTTAAG...GTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGTTTATATATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313367.7
CDS-3UTR GCA 90 bp CACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTCTTCTTTACTGCAGGGTGGTTACCTaGACAAAGTCCCATTTCCAA +
Preference number: 4 (lower is better)
Translates to: HFRRQAQEKYTNVIFLLYCRVVT*TKSHFQ
Trigger: TTGGAAATGGGACTTTGTGCAGGTAACCACCCTGCA...GTAAAGAAGAAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313367.7
CDS-3UTR CCA 90 bp AAAGGGGTAAGACACTCACTTAAAGCTTTACCAGAACACAACACAAAGCAAGAAGGACAGCAAGTCACTTaGCCTCGAGACAATCAAAAT +
Preference number: 4 (lower is better)
Translates to: KGVRHSLKALPEHNTKQEGQQVT*PRDNQN
Trigger: ATTTTGATTGTCTCGAGGCCAAGTGACTTGCTGTCC...TTCTTGCTTTGTGTTGTGTTCTGGTAAAGCTTTAAGTGAGTGTCTTACCCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313367.7
CDS-3UTR CCA 90 bp CACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTCTTCTTTACTCTCATCACTCATCATaGACAGCAAGTCACTTGGCC +
Preference number: 4 (lower is better)
Translates to: HFRRQAQEKYTNVIFLLYSHHSS*TASHLA
Trigger: GGCCAAGTGACTTGCTGTCCATGATGAGTGATGAGA...GTAAAGAAGAAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp ATAGACTTAAAGAGTTACAATGCTAAGCTAAGCACAAGTGATCATCCTAGAGTAGTCGACTTCCTTGCTTaGAAGAGCAGCTACTTGTGC +
Preference number: 4 (lower is better)
Translates to: IDLKSYNAKLSTSDHPRVVDFLA*KSSYLC
Trigger: GCACAAGTAGCTGCTCTTCCAAGCAAGGAAGTCGAC...TACTCTAGGATGATCACTTGTGCTTAGCTTAGCATTGTAACTCTTTAAGTCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp AAAGGGGTAAGACACTCACTTAAAGCTTTACCAGAACACAACACAAAGCAAGAATCCTTTCTGAACTGGTaGCTCCTGGGTGTAATTCAT +
Preference number: 4 (lower is better)
Translates to: KGVRHSLKALPEHNTKQESFLNW*LLGVIH
Trigger: ATGAATTACACCCAGGAGCCACCAGTTCAGAAAGGA...TTCTTGCTTTGTGTTGTGTTCTGGTAAAGCTTTAAGTGAGTGTCTTACCCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313367.7
CDS-3UTR CCA 90 bp AAATATATAAACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACTCCTTTCTGAACTGGTaGCTCCTGGGTGTAATTCAT +
Preference number: 4 (lower is better)
Translates to: KYINTGLCHFRRQAQEKYSFLNW*LLGVIH
Trigger: ATGAATTACACCCAGGAGCCACCAGTTCAGAAAGGA...GTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGTTTATATATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp GGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTAAATCCTTTCTGAACTaGTGGCTCCTGGGTGTAATT +
Preference number: 4 (lower is better)
Translates to: GLCHFRRQAQEKYTNVIFKSFLN*WLLGVI
Trigger: AATTACACCCAGGAGCCACCAGTTCAGAAAGGATTT...AAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp GCAGGAATCATCATGCAGGTTCTTGATGACAATCTCTCCATAGTGCTCAATCCATATCGGTTTGGCTCTTaGCATATTTCAAGATTCCTT +
Preference number: 4 (lower is better)
Translates to: AGIIMQVLDDNLSIVLNPYRFGS*HISRFL
Trigger: AAGGAATCTTGAAATATGCCAAGAGCCAAACCGATA...TGGATTGAGCACTATGGAGAGATTGTCATCAAGAACCTGCATGATGATTCCTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp TTTCACCATAAGACAGGATGGTCCAGTTTGGAAAAACCAAGATCTTTTCTAAGTCGATACATTCTGTGGTaGCGAAGTTTCGATACCCAC +
Preference number: 4 (lower is better)
Translates to: FHHKTGWSSLEKPRSFLSRYILW*RSFDTH
Trigger: GTGGGTATCGAAACTTCGCCACCACAGAATGTATCG...ACTTAGAAAAGATCTTGGTTTTTCCAAACTGGACCATCCTGTCTTATGGTGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp GCAGGAATCATCATGCAGGTTCTTGATGACAATCTCTCCATAGTGCTCAATCCACTTCATGTGGAAACATaGCAATTTCATTCTGACGAT +
Preference number: 4 (lower is better)
Translates to: AGIIMQVLDDNLSIVLNPLHVET*QFHSDD
Trigger: ATCGTCAGAATGAAATTGCCATGTTTCCACATGAAG...TGGATTGAGCACTATGGAGAGATTGTCATCAAGAACCTGCATGATGATTCCTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp ACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTAGACCCTGAGAAAAAGTaGTTAACTTCATGTGGAAAC +
Preference number: 4 (lower is better)
Translates to: TQVCATSEGKHRRNTLMLDPEKK*LTSCGN
Trigger: GTTTCCACATGAAGTTAACCACTTTTTCTCAGGGTC...TAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp TTTCACCATAAGACAGGATGGTCCAGTTTGGAAAAACCAAGATCTTTTCTAAGTTCAAAAGATCCACCCTaGATGGCGTTGATAGCTGGT +
Preference number: 4 (lower is better)
Translates to: FHHKTGWSSLEKPRSFLSSKDPP*MALIAG
Trigger: ACCAGCTATCAACGCCATCCAGGGTGGATCTTTTGA...ACTTAGAAAAGATCTTGGTTTTTCCAAACTGGACCATCCTGTCTTATGGTGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000409452.5
ENST00000409759.5
CDS-3UTR CCA 90 bp CACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTCTTCTTTACGAGATAGGCGGATGGTaGCTGACCTGTTCTGAAAAA +
Preference number: 4 (lower is better)
Translates to: HFRRQAQEKYTNVIFLLYEIGGW*LTCSEK
Trigger: TTTTTCAGAACAGGTCAGCCACCATCCGCCTATCTC...GTAAAGAAGAAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp AAGATCTTTTCTAAGTTCCAAATAGGTGCCGTTGCTCACCCAAGAGTCATCGTCATGGGTTGTGCCAATTaGAACAATTTCCATGGATTT +
Preference number: 4 (lower is better)
Translates to: KIFSKFQIGAVAHPRVIVMGCAN*NNFHGF
Trigger: AAATCCATGGAAATTGTTCCAATTGGCACAACCCAT...GACGATGACTCTTGGGTGAGCAACGGCACCTATTTGGAACTTAGAAAAGATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp CCCAGGGAAGTAAAAATAAACATGCAGACAGCCCTAAAGACATGTTTTCCAGCCATGGGTTGTGCCAATTaGAACAATTTCCATGGATTT +
Preference number: 4 (lower is better)
Translates to: PREVKINMQTALKTCFPAMGCAN*NNFHGF
Trigger: AAATCCATGGAAATTGTTCCAATTGGCACAACCCAT...GGCTGGAAAACATGTCTTTAGGGCTGTCTGCATGTTTATTTTTACTTCCCTGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp GGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTCCGCTTAAGATGTTATaGATGCAAGAGGTCACTTTG +
Preference number: 4 (lower is better)
Translates to: GLCHFRRQAQEKYTNVIFPLKML*MQEVTL
Trigger: CAAAGTGACCTCTTGCATCCATAACATCTTAAGCGG...AAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp CACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTCTTCTTTACTCCTCTAGAAACCTCTaGTCTGGCCTAAATCGAGTG +
Preference number: 4 (lower is better)
Translates to: HFRRQAQEKYTNVIFLLYSSRNL*SGLNRV
Trigger: CACTCGATTTAGGCCAGACCAGAGGTTTCTAGAGGA...GTAAAGAAGAAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp GGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTCACCATAAGACAGGATaGTCCAGTTTGGAAAAACCA +
Preference number: 4 (lower is better)
Translates to: GLCHFRRQAQEKYTNVIFHHKTG*SSLEKP
Trigger: TGGTTTTTCCAAACTGGACCATCCTGTCTTATGGTG...AAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp CTTAACTTCTCAAGGACTCAGCTCTCACTAAGGAGAAATTTCCTACTGTCTCTCCATCTGGACAGAAGTTaGACATGCTTTGATAACACA +
Preference number: 4 (lower is better)
Translates to: LNFSRTQLSLRRNFLLSLHLDRS*TCFDNT
Trigger: TGTGTTATCAAAGCATGTCCAACTTCTGTCCAGATG...GAGAGACAGTAGGAAATTTCTCCTTAGTGAGAGCTGAGTCCTTGAGAAGTTAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313367.7
CDS-3UTR TCA 90 bp ATAGACTTAAAGAGTTACAATGCTAAGCTAAGCACAAGTGATCATCCTAGAGTACTTTACAGACATCACTaGGAGCCCGACATCAATGCA +
Preference number: 4 (lower is better)
Translates to: IDLKSYNAKLSTSDHPRVLYRHH*EPDINA
Trigger: TGCATTGATGTCGGGCTCTCAGTGATGTCTGTAAAG...TACTCTAGGATGATCACTTGTGCTTAGCTTAGCATTGTAACTCTTTAAGTCTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp GGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTATCAAAGACTTCTTCTaGCTTGACCTTCAGATGGTA +
Preference number: 4 (lower is better)
Translates to: GLCHFRRQAQEKYTNVIFIKDFF*LDLQMV
Trigger: TACCATCTGAAGGTCAAGTCAGAAGAAGTCTTTGAT...AAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp AAATATATAAACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACATGGCAATTTCATTCTaGCGATACATTCTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: KYINTGLCHFRRQAQEKYMAISF*RYILWW
Trigger: CCACCACAGAATGTATCGTCAGAATGAAATTGCCAT...GTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGTTTATATATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp ATAGACTTAAAGAGTTACAATGCTAAGCTAAGCACAAGTGATCATCCTAGAGTACAGATGAAGAGTCTGTaGTGGTGGACCCTGAGAAAA +
Preference number: 4 (lower is better)
Translates to: IDLKSYNAKLSTSDHPRVQMKSL*WWTLRK
Trigger: TTTTCTCAGGGTCCACCATCACAGACTCTTCATCTG...TACTCTAGGATGATCACTTGTGCTTAGCTTAGCATTGTAACTCTTTAAGTCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp ACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTAACTTTATGGGCAATATaGCACAGATCTTCTTGCATT +
Preference number: 4 (lower is better)
Translates to: TQVCATSEGKHRRNTLMLTLWAI*HRSSCI
Trigger: AATGCAAGAAGATCTGTGTCATATTGCCCATAAAGT...TAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp TTCTGTCCACCCAGGGAAGTAAAAATAAACATGCAGACAGCCCTAAAGACATGTACTTTATGGGCAATATaGCACAGATCTTCTTGCATT +
Preference number: 4 (lower is better)
Translates to: FCPPREVKINMQTALKTCTLWAI*HRSSCI
Trigger: AATGCAAGAAGATCTGTGTCATATTGCCCATAAAGT...ACATGTCTTTAGGGCTGTCTGCATGTTTATTTTTACTTCCCTGGGTGGACAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp TTCTGTCCACCCAGGGAAGTAAAAATAAACATGCAGACAGCCCTAAAGACATGTAAGCTGACCTTAAAGTaGAGTAAACTTTATGGGCAA +
Preference number: 4 (lower is better)
Translates to: FCPPREVKINMQTALKTCKLTLK*SKLYGQ
Trigger: TTGCCCATAAAGTTTACTTCACTTTAAGGTCAGCTT...ACATGTCTTTAGGGCTGTCTGCATGTTTATTTTTACTTCCCTGGGTGGACAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp ACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTAAAGCTGACCTTAAAGTaGAGTAAACTTTATGGGCAA +
Preference number: 4 (lower is better)
Translates to: TQVCATSEGKHRRNTLMLKLTLK*SKLYGQ
Trigger: TTGCCCATAAAGTTTACTTCACTTTAAGGTCAGCTT...TAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp CACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTCTTCTTTACTTTCCAAATGCCACATaGCAGTGCTACGTCCATTCA +
Preference number: 4 (lower is better)
Translates to: HFRRQAQEKYTNVIFLLYFPNAT*QCYVHS
Trigger: TGAATGGACGTAGCACTGTCATGTGGCATTTGGAAA...GTAAAGAAGAAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313367.7
CDS-3UTR GCA 90 bp CACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTCTTCTTTACAAGAGCAGCTACTTGTaGTCCTTGAAGGTGATACCA +
Preference number: 4 (lower is better)
Translates to: HFRRQAQEKYTNVIFLLYKSSYL*SLKVIP
Trigger: TGGTATCACCTTCAAGGAGCACAAGTAGCTGCTCTT...GTAAAGAAGAAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp ATAGACTTAAAGAGTTACAATGCTAAGCTAAGCACAAGTGATCATCCTAGAGTATCCTGTCGACTTCCTTaGTTGGAAGAGCAGCTACTT +
Preference number: 4 (lower is better)
Translates to: IDLKSYNAKLSTSDHPRVSCRLP*LEEQLL
Trigger: AAGTAGCTGCTCTTCCAAGCAAGGAAGTCGACAGGA...TACTCTAGGATGATCACTTGTGCTTAGCTTAGCATTGTAACTCTTTAAGTCTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp CTTAACTTCTCAAGGACTCAGCTCTCACTAAGGAGAAATTTCCTACTGTCTCTCCGGTGTCAAGGTCTATaGATTTTGATGACTTCTTTA +
Preference number: 4 (lower is better)
Translates to: LNFSRTQLSLRRNFLLSLRCQGL*ILMTSL
Trigger: TAAAGAAGTCATCAAAATGCATAGACCTTGACACCG...GAGAGACAGTAGGAAATTTCTCCTTAGTGAGAGCTGAGTCCTTGAGAAGTTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313367.7
CDS-3UTR GCA 90 bp TTCTGTCCACCCAGGGAAGTAAAAATAAACATGCAGACAGCCCTAAAGACATGTCGGTGTCAAGGTCTATaGATTTTGATGACTTCTTTA +
Preference number: 4 (lower is better)
Translates to: FCPPREVKINMQTALKTCRCQGL*ILMTSL
Trigger: TAAAGAAGTCATCAAAATGCATAGACCTTGACACCG...ACATGTCTTTAGGGCTGTCTGCATGTTTATTTTTACTTCCCTGGGTGGACAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp CACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTCTTCTTTACAAAGGTTTCGGGACCTaGAGTGTTCCTTTAGCATCT +
Preference number: 4 (lower is better)
Translates to: HFRRQAQEKYTNVIFLLYKGFGT*SVPLAS
Trigger: AGATGCTAAAGGAACACTGCAGGTCCCGAAACCTTT...GTAAAGAAGAAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313367.7
ENST00000409452.5
ENST00000409759.5
CDS-3UTR GCA 90 bp ATAGACTTAAAGAGTTACAATGCTAAGCTAAGCACAAGTGATCATCCTAGAGTATCTGGAGTTTTCCTCTaGCAGATTGTCACCCGACTT +
Preference number: 4 (lower is better)
Translates to: IDLKSYNAKLSTSDHPRVSGVFL*QIVTRL
Trigger: AAGTCGGGTGACAATCTGGCAGAGGAAAACTCCAGA...TACTCTAGGATGATCACTTGTGCTTAGCTTAGCATTGTAACTCTTTAAGTCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409863.5
CDS-3UTR GCA 90 bp ACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTACAATTTCCATGGATTTaGCCCAGAATTTGTTTTTCC +
Preference number: 4 (lower is better)
Translates to: TQVCATSEGKHRRNTLMLQFPWI*PRICFS
Trigger: GGAAAAACAAATTCTGGGGCAAATCCATGGAAATTG...TAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp AAATATATAAACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACGAGTCACATGGGTTGTaGCAATTGGAACAATTTCCA +
Preference number: 4 (lower is better)
Translates to: KYINTGLCHFRRQAQEKYESHGL*QLEQFP
Trigger: TGGAAATTGTTCCAATTGGCACAACCCATGTGACTC...GTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGTTTATATATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp CACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTCTTCTTTACTCCTGTCAAACACTGTaGCTTCAATCTCATGGGCAT +
Preference number: 4 (lower is better)
Translates to: HFRRQAQEKYTNVIFLLYSCQTL*LQSHGH
Trigger: ATGCCCATGAGATTGAAGGCACAGTGTTTGACAGGA...GTAAAGAAGAAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp AAATATATAAACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACATAAACACAGGTTTGTaGCACTTCAGAAGGCAAGCA +
Preference number: 4 (lower is better)
Translates to: KYINTGLCHFRRQAQEKYINTGL*HFRRQA
Trigger: TGCTTGCCTTCTGAAGTGGCACAAACCTGTGTTTAT...GTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGTTTATATATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp CACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTCTTCTTTACAAAATGCCAGTCACGTaGAGATTCCAGAAGGCTACA +
Preference number: 4 (lower is better)
Translates to: HFRRQAQEKYTNVIFLLYKMPVT*RFQKAT
Trigger: TGTAGCCTTCTGGAATCTGCACGTGACTGGCATTTT...GTAAAGAAGAAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313367.7
CDS-3UTR GCA 90 bp AAATATATAAACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACCGTCCATTCAGGCTGTaGATTTTGTTTTCGTTGCTT +
Preference number: 4 (lower is better)
Translates to: KYINTGLCHFRRQAQEKYRPFRL*ILFSLL
Trigger: AAGCAACGAAAACAAAATGCACAGCCTGAATGGACG...GTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGTTTATATATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313367.7
CDS-3UTR CCA 90 bp AAATATATAAACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACAAATCCTTTCTGAACTaGTGGCTCCTGGGTGTAATT +
Preference number: 4 (lower is better)
Translates to: KYINTGLCHFRRQAQEKYKSFLN*WLLGVI
Trigger: AATTACACCCAGGAGCCACCAGTTCAGAAAGGATTT...GTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGTTTATATATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp TTCTGTCCACCCAGGGAAGTAAAAATAAACATGCAGACAGCCCTAAAGACATGTTATCGGTTTGGCTCTTaGCATATTTCAAGATTCCTT +
Preference number: 4 (lower is better)
Translates to: FCPPREVKINMQTALKTCYRFGS*HISRFL
Trigger: AAGGAATCTTGAAATATGCCAAGAGCCAAACCGATA...ACATGTCTTTAGGGCTGTCTGCATGTTTATTTTTACTTCCCTGGGTGGACAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp ATAGACTTAAAGAGTTACAATGCTAAGCTAAGCACAAGTGATCATCCTAGAGTACGATACATTCTGTGGTaGCGAAGTTTCGATACCCAC +
Preference number: 4 (lower is better)
Translates to: IDLKSYNAKLSTSDHPRVRYILW*RSFDTH
Trigger: GTGGGTATCGAAACTTCGCCACCACAGAATGTATCG...TACTCTAGGATGATCACTTGTGCTTAGCTTAGCATTGTAACTCTTTAAGTCTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp GGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTGACCCTGAGAAAAAGTaGTTAACTTCATGTGGAAAC +
Preference number: 4 (lower is better)
Translates to: GLCHFRRQAQEKYTNVIFDPEKK*LTSCGN
Trigger: GTTTCCACATGAAGTTAACCACTTTTTCTCAGGGTC...AAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp CACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTCTTCTTTACGCTTCCTACTTGAAATaGAGTCAAACACCCCAGATG +
Preference number: 4 (lower is better)
Translates to: HFRRQAQEKYTNVIFLLYASYLK*SQTPQM
Trigger: CATCTGGGGTGTTTGACTCCATTTCAAGTAGGAAGC...GTAAAGAAGAAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp ATAGACTTAAAGAGTTACAATGCTAAGCTAAGCACAAGTGATCATCCTAGAGTAAGTGCGCCAGGTCTTTaGAGCATTTTTCCATGTCCT +
Preference number: 4 (lower is better)
Translates to: IDLKSYNAKLSTSDHPRVSAPGL*SIFPCP
Trigger: AGGACATGGAAAAATGCTCCAAAGACCTGGCGCACT...TACTCTAGGATGATCACTTGTGCTTAGCTTAGCATTGTAACTCTTTAAGTCTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp ATAGACTTAAAGAGTTACAATGCTAAGCTAAGCACAAGTGATCATCCTAGAGTATCAAAAGATCCACCCTaGATGGCGTTGATAGCTGGT +
Preference number: 4 (lower is better)
Translates to: IDLKSYNAKLSTSDHPRVSKDPP*MALIAG
Trigger: ACCAGCTATCAACGCCATCCAGGGTGGATCTTTTGA...TACTCTAGGATGATCACTTGTGCTTAGCTTAGCATTGTAACTCTTTAAGTCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313367.7
ENST00000409452.5
ENST00000409759.5
CDS-3UTR CCA 90 bp CACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTCTTCTTTACATGATCCCCAAAAACTaGCAGAGTCACATGGGTTGT +
Preference number: 4 (lower is better)
Translates to: HFRRQAQEKYTNVIFLLYMIPKN*QSHMGC
Trigger: ACAACCCATGTGACTCTGCCAGTTTTTGGGGATCAT...GTAAAGAAGAAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp CACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTCTTCTTTACCTGCCACATATACCCTaGATGAGAAAAACAGCTCGA +
Preference number: 4 (lower is better)
Translates to: HFRRQAQEKYTNVIFLLYLPHIP*MRKTAR
Trigger: TCGAGCTGTTTTTCTCATCCAGGGTATATGTGGCAG...GTAAAGAAGAAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp TTTCACCATAAGACAGGATGGTCCAGTTTGGAAAAACCAAGATCTTTTCTAAGTCTGCCACATATACCCTaGATGAGAAAAACAGCTCGA +
Preference number: 4 (lower is better)
Translates to: FHHKTGWSSLEKPRSFLSLPHIP*MRKTAR
Trigger: TCGAGCTGTTTTTCTCATCCAGGGTATATGTGGCAG...ACTTAGAAAAGATCTTGGTTTTTCCAAACTGGACCATCCTGTCTTATGGTGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp AAATATATAAACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACATCAAAGACTTCTTCTaGCTTGACCTTCAGATGGTA +
Preference number: 4 (lower is better)
Translates to: KYINTGLCHFRRQAQEKYIKDFF*LDLQMV
Trigger: TACCATCTGAAGGTCAAGTCAGAAGAAGTCTTTGAT...GTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGTTTATATATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp CTTGTCCTCCCGAATACATTCATATGTTTCTCCAAGAACCGGATTAAATGGCTTTATGTCACTGACATATaGGTCATCATCAGAAATCTC +
Preference number: 4 (lower is better)
Translates to: LVLPNTFICFSKNRIKWLYVTDI*VIIRNL
Trigger: GAGATTTCTGATGATGACTCATATGTCAGTGACATA...AAGCCATTTAATCCGGTTCTTGGAGAAACATATGAATGTATTCGGGAGGACAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp GGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTCGGTGTCAAGGTCTATaGATTTTGATGACTTCTTTA +
Preference number: 4 (lower is better)
Translates to: GLCHFRRQAQEKYTNVIFRCQGL*ILMTSL
Trigger: TAAAGAAGTCATCAAAATGCATAGACCTTGACACCG...AAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp GGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTCAATTTCCATGGATTTaGCCCAGAATTTGTTTTTCC +
Preference number: 4 (lower is better)
Translates to: GLCHFRRQAQEKYTNVIFQFPWI*PRICFS
Trigger: GGAAAAACAAATTCTGGGGCAAATCCATGGAAATTG...AAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp CACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTCTTCTTTACGAGTCACATGGGTTGTaGCAATTGGAACAATTTCCA +
Preference number: 4 (lower is better)
Translates to: HFRRQAQEKYTNVIFLLYESHGL*QLEQFP
Trigger: TGGAAATTGTTCCAATTGGCACAACCCATGTGACTC...GTAAAGAAGAAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp ATAGACTTAAAGAGTTACAATGCTAAGCTAAGCACAAGTGATCATCCTAGAGTAGCAGATGGAAGACAGTaGTTGAAGCCCAAACAAATG +
Preference number: 4 (lower is better)
Translates to: IDLKSYNAKLSTSDHPRVADGRQ*LKPKQM
Trigger: CATTTGTTTGGGCTTCAAGCACTGTCTTCCATCTGC...TACTCTAGGATGATCACTTGTGCTTAGCTTAGCATTGTAACTCTTTAAGTCTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313367.7
CDS-3UTR CCA 90 bp ATAGACTTAAAGAGTTACAATGCTAAGCTAAGCACAAGTGATCATCCTAGAGTAGGACAGCAAGTCACTTaGCCTCGAGACAATCAAAAT +
Preference number: 4 (lower is better)
Translates to: IDLKSYNAKLSTSDHPRVGQQVT*PRDNQN
Trigger: ATTTTGATTGTCTCGAGGCCAAGTGACTTGCTGTCC...TACTCTAGGATGATCACTTGTGCTTAGCTTAGCATTGTAACTCTTTAAGTCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp ATAGACTTAAAGAGTTACAATGCTAAGCTAAGCACAAGTGATCATCCTAGAGTATCCTTTCTGAACTGGTaGCTCCTGGGTGTAATTCAT +
Preference number: 4 (lower is better)
Translates to: IDLKSYNAKLSTSDHPRVSFLNW*LLGVIH
Trigger: ATGAATTACACCCAGGAGCCACCAGTTCAGAAAGGA...TACTCTAGGATGATCACTTGTGCTTAGCTTAGCATTGTAACTCTTTAAGTCTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp GGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTCTTCATGTGGAAACATaGCAATTTCATTCTGACGAT +
Preference number: 4 (lower is better)
Translates to: GLCHFRRQAQEKYTNVIFLHVET*QFHSDD
Trigger: ATCGTCAGAATGAAATTGCCATGTTTCCACATGAAG...AAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp TTTCACCATAAGACAGGATGGTCCAGTTTGGAAAAACCAAGATCTTTTCTAAGTATGCATACGCTGATATaGCAAAGGCTGCCACATATA +
Preference number: 4 (lower is better)
Translates to: FHHKTGWSSLEKPRSFLSMHTLI*QRLPHI
Trigger: TATATGTGGCAGCCTTTGCCATATCAGCGTATGCAT...ACTTAGAAAAGATCTTGGTTTTTCCAAACTGGACCATCCTGTCTTATGGTGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp ATAGACTTAAAGAGTTACAATGCTAAGCTAAGCACAAGTGATCATCCTAGAGTAAAGAACCGGATTAAATaGCTTGCTTCCAGCTCGGTA +
Preference number: 4 (lower is better)
Translates to: IDLKSYNAKLSTSDHPRVKNRIK*LASSSV
Trigger: TACCGAGCTGGAAGCAAGCCATTTAATCCGGTTCTT...TACTCTAGGATGATCACTTGTGCTTAGCTTAGCATTGTAACTCTTTAAGTCTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp ATAGACTTAAAGAGTTACAATGCTAAGCTAAGCACAAGTGATCATCCTAGAGTAATGATCCCCAAAAACTaGCAGAGTCACATGGGTTGT +
Preference number: 4 (lower is better)
Translates to: IDLKSYNAKLSTSDHPRVMIPKN*QSHMGC
Trigger: ACAACCCATGTGACTCTGCCAGTTTTTGGGGATCAT...TACTCTAGGATGATCACTTGTGCTTAGCTTAGCATTGTAACTCTTTAAGTCTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp CACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTCTTCTTTACCCGCTTAAGATGTTATaGATGCAAGAGGTCACTTTG +
Preference number: 4 (lower is better)
Translates to: HFRRQAQEKYTNVIFLLYPLKML*MQEVTL
Trigger: CAAAGTGACCTCTTGCATCCATAACATCTTAAGCGG...GTAAAGAAGAAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp CACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTCTTCTTTACCACCATAAGACAGGATaGTCCAGTTTGGAAAAACCA +
Preference number: 4 (lower is better)
Translates to: HFRRQAQEKYTNVIFLLYHHKTG*SSLEKP
Trigger: TGGTTTTTCCAAACTGGACCATCCTGTCTTATGGTG...GTAAAGAAGAAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp TTTCACCATAAGACAGGATGGTCCAGTTTGGAAAAACCAAGATCTTTTCTAAGTCACCATAAGACAGGATaGTCCAGTTTGGAAAAACCA +
Preference number: 4 (lower is better)
Translates to: FHHKTGWSSLEKPRSFLSHHKTG*SSLEKP
Trigger: TGGTTTTTCCAAACTGGACCATCCTGTCTTATGGTG...ACTTAGAAAAGATCTTGGTTTTTCCAAACTGGACCATCCTGTCTTATGGTGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
3UTR CAA 72 bp CTTCCTCATGTCTGTGAGCAGAATTTGGATAAATGCTaGAGATGGAAAGAACAAAGCATACACCAAAGAATC +
Preference number: 4 (lower is better)
Translates to: LPHVCEQNLDKC*RWKEQSIHQRI
Trigger: GATTCTTTGGTGTATGCTTTGTTCTTTCCATCTCAAGCATTTATCCAAATTCTGCTCACAGACATGAGGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313367.7
CDS-3UTR TCA 90 bp ATAGACTTAAAGAGTTACAATGCTAAGCTAAGCACAAGTGATCATCCTAGAGTAATGGCAATTTCATTCTaGCGATACATTCTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: IDLKSYNAKLSTSDHPRVMAISF*RYILWW
Trigger: CCACCACAGAATGTATCGTCAGAATGAAATTGCCAT...TACTCTAGGATGATCACTTGTGCTTAGCTTAGCATTGTAACTCTTTAAGTCTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp AAAGGGGTAAGACACTCACTTAAAGCTTTACCAGAACACAACACAAAGCAAGAAACTTTATGGGCAATATaGCACAGATCTTCTTGCATT +
Preference number: 4 (lower is better)
Translates to: KGVRHSLKALPEHNTKQETLWAI*HRSSCI
Trigger: AATGCAAGAAGATCTGTGTCATATTGCCCATAAAGT...TTCTTGCTTTGTGTTGTGTTCTGGTAAAGCTTTAAGTGAGTGTCTTACCCCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313367.7
CDS-3UTR TCA 90 bp AAATATATAAACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACTATGTCACTGACATATaGGTCATCATCAGAAATCTC +
Preference number: 4 (lower is better)
Translates to: KYINTGLCHFRRQAQEKYYVTDI*VIIRNL
Trigger: GAGATTTCTGATGATGACTCATATGTCAGTGACATA...GTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGTTTATATATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp AAATATATAAACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACTATCACTTATGTCACTaGCATATGAGTCATCATCAG +
Preference number: 4 (lower is better)
Translates to: KYINTGLCHFRRQAQEKYYHLCH*HMSHHQ
Trigger: CTGATGATGACTCATATGTCAGTGACATAAGTGATA...GTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGTTTATATATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp AAATATATAAACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACAATTCAAGAGCTGTCTaGGGCAAAAAGATATTTCAG +
Preference number: 4 (lower is better)
Translates to: KYINTGLCHFRRQAQEKYNSRAV*GKKIFQ
Trigger: CTGAAATATCTTTTTGCCTCAGACAGCTCTTGAATT...GTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGTTTATATATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313367.7
CDS-3UTR GCA 90 bp GGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTAGTTGTTCAATCCTCTaGTTTTGTATTTCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: GLCHFRRQAQEKYTNVIFSCSIL*FCISAS
Trigger: AGAAGCTGAAATACAAAAGCAGAGGATTGAACAACT...AAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp CTTGTCCTCCCGAATACATTCATATGTTTCTCCAAGAACCGGATTAAATGGCTTAGTTGTTCAATCCTCTaGTTTTGTATTTCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: LVLPNTFICFSKNRIKWLSCSIL*FCISAS
Trigger: AGAAGCTGAAATACAAAAGCAGAGGATTGAACAACT...AAGCCATTTAATCCGGTTCTTGGAGAAACATATGAATGTATTCGGGAGGACAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp CACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTCTTCTTTACCTCTCTATATCGGTTTaGCTCTTGGCATATTTCAAG +
Preference number: 4 (lower is better)
Translates to: HFRRQAQEKYTNVIFLLYLSISV*LLAYFK
Trigger: CTTGAAATATGCCAAGAGCCAAACCGATATAGAGAG...GTAAAGAAGAAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp AAAGGGGTAAGACACTCACTTAAAGCTTTACCAGAACACAACACAAAGCAAGAACTTCATGTGGAAACATaGCAATTTCATTCTGACGAT +
Preference number: 4 (lower is better)
Translates to: KGVRHSLKALPEHNTKQELHVET*QFHSDD
Trigger: ATCGTCAGAATGAAATTGCCATGTTTCCACATGAAG...TTCTTGCTTTGTGTTGTGTTCTGGTAAAGCTTTAAGTGAGTGTCTTACCCCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313367.7
CDS-3UTR CCA 90 bp TTTCACCATAAGACAGGATGGTCCAGTTTGGAAAAACCAAGATCTTTTCTAAGTGACCCTGAGAAAAAGTaGTTAACTTCATGTGGAAAC +
Preference number: 4 (lower is better)
Translates to: FHHKTGWSSLEKPRSFLSDPEKK*LTSCGN
Trigger: GTTTCCACATGAAGTTAACCACTTTTTCTCAGGGTC...ACTTAGAAAAGATCTTGGTTTTTCCAAACTGGACCATCCTGTCTTATGGTGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp CACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTCTTCTTTACGACCCTGAGAAAAAGTaGTTAACTTCATGTGGAAAC +
Preference number: 4 (lower is better)
Translates to: HFRRQAQEKYTNVIFLLYDPEKK*LTSCGN
Trigger: GTTTCCACATGAAGTTAACCACTTTTTCTCAGGGTC...GTAAAGAAGAAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp CACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTCTTCTTTACTCATCCAGTTGTCCCTaGGACTCTAAAATAAAGCAT +
Preference number: 4 (lower is better)
Translates to: HFRRQAQEKYTNVIFLLYSSSCP*DSKIKH
Trigger: ATGCTTTATTTTAGAGTCCCAGGGACAACTGGATGA...GTAAAGAAGAAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313367.7
CDS-3UTR TCA 90 bp CACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTCTTCTTTACAAGCTGACCTTAAAGTaGAGTAAACTTTATGGGCAA +
Preference number: 4 (lower is better)
Translates to: HFRRQAQEKYTNVIFLLYKLTLK*SKLYGQ
Trigger: TTGCCCATAAAGTTTACTTCACTTTAAGGTCAGCTT...GTAAAGAAGAAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp ATAGACTTAAAGAGTTACAATGCTAAGCTAAGCACAAGTGATCATCCTAGAGTAATACACCAAAGAATCTaGCTGTGTCATTCAACTGCT +
Preference number: 4 (lower is better)
Translates to: IDLKSYNAKLSTSDHPRVIHQRI*LCHSTA
Trigger: AGCAGTTGAATGACACAGTCAGATTCTTTGGTGTAT...TACTCTAGGATGATCACTTGTGCTTAGCTTAGCATTGTAACTCTTTAAGTCTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313367.7
CDS-3UTR GCA 90 bp CACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTCTTCTTTACCGGTGTCAAGGTCTATaGATTTTGATGACTTCTTTA +
Preference number: 4 (lower is better)
Translates to: HFRRQAQEKYTNVIFLLYRCQGL*ILMTSL
Trigger: TAAAGAAGTCATCAAAATGCATAGACCTTGACACCG...GTAAAGAAGAAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp CACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTCTTCTTTACTCTGCTTTGATATACTaGTACGCTTCCTACTTGAAA +
Preference number: 4 (lower is better)
Translates to: HFRRQAQEKYTNVIFLLYSALIY*YASYLK
Trigger: TTTCAAGTAGGAAGCGTAGCAGTATATCAAAGCAGA...GTAAAGAAGAAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp AAATATATAAACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACAGTTGTTCAATCCTCTaGTTTTGTATTTCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: KYINTGLCHFRRQAQEKYSCSIL*FCISAS
Trigger: AGAAGCTGAAATACAAAAGCAGAGGATTGAACAACT...GTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGTTTATATATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp AAATATATAAACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTACATGGAGAAGCTaGATTGAGGCTTTTATTATT +
Preference number: 4 (lower is better)
Translates to: KYINTGLCHFRRQAQEKYTTWRS*IEAFII
Trigger: AATAATAAAAGCCTCAATGCAGCTTCTCCATGTAGT...GTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGTTTATATATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313367.7
CDS-3UTR CCA 90 bp CACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTCTTCTTTACTATCGGTTTGGCTCTTaGCATATTTCAAGATTCCTT +
Preference number: 4 (lower is better)
Translates to: HFRRQAQEKYTNVIFLLYYRFGS*HISRFL
Trigger: AAGGAATCTTGAAATATGCCAAGAGCCAAACCGATA...GTAAAGAAGAAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp ATAGACTTAAAGAGTTACAATGCTAAGCTAAGCACAAGTGATCATCCTAGAGTACTCTCTATATCGGTTTaGCTCTTGGCATATTTCAAG +
Preference number: 4 (lower is better)
Translates to: IDLKSYNAKLSTSDHPRVLSISV*LLAYFK
Trigger: CTTGAAATATGCCAAGAGCCAAACCGATATAGAGAG...TACTCTAGGATGATCACTTGTGCTTAGCTTAGCATTGTAACTCTTTAAGTCTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp CACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTCTTCTTTACCTTCATGTGGAAACATaGCAATTTCATTCTGACGAT +
Preference number: 4 (lower is better)
Translates to: HFRRQAQEKYTNVIFLLYLHVET*QFHSDD
Trigger: ATCGTCAGAATGAAATTGCCATGTTTCCACATGAAG...GTAAAGAAGAAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp ATAGACTTAAAGAGTTACAATGCTAAGCTAAGCACAAGTGATCATCCTAGAGTAGGTTTTAATGTCATCTaGACAGAAGTTGGACATGCT +
Preference number: 4 (lower is better)
Translates to: IDLKSYNAKLSTSDHPRVGFNVI*TEVGHA
Trigger: AGCATGTCCAACTTCTGTCCAGATGACATTAAAACC...TACTCTAGGATGATCACTTGTGCTTAGCTTAGCATTGTAACTCTTTAAGTCTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313367.7
CDS-3UTR CCA 90 bp ATAGACTTAAAGAGTTACAATGCTAAGCTAAGCACAAGTGATCATCCTAGAGTACTAGAGACATACATTTaGGGGAAAGATGCTTTTGAG +
Preference number: 4 (lower is better)
Translates to: IDLKSYNAKLSTSDHPRVLETYI*GKDAFE
Trigger: CTCAAAAGCATCTTTCCCCCAAATGTATGTCTCTAG...TACTCTAGGATGATCACTTGTGCTTAGCTTAGCATTGTAACTCTTTAAGTCTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313367.7
CDS-3UTR TCA 90 bp ATAGACTTAAAGAGTTACAATGCTAAGCTAAGCACAAGTGATCATCCTAGAGTAAAGCTGACCTTAAAGTaGAGTAAACTTTATGGGCAA +
Preference number: 4 (lower is better)
Translates to: IDLKSYNAKLSTSDHPRVKLTLK*SKLYGQ
Trigger: TTGCCCATAAAGTTTACTTCACTTTAAGGTCAGCTT...TACTCTAGGATGATCACTTGTGCTTAGCTTAGCATTGTAACTCTTTAAGTCTAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp ATAGACTTAAAGAGTTACAATGCTAAGCTAAGCACAAGTGATCATCCTAGAGTATATGTCACTGACATATaGGTCATCATCAGAAATCTC +
Preference number: 4 (lower is better)
Translates to: IDLKSYNAKLSTSDHPRVYVTDI*VIIRNL
Trigger: GAGATTTCTGATGATGACTCATATGTCAGTGACATA...TACTCTAGGATGATCACTTGTGCTTAGCTTAGCATTGTAACTCTTTAAGTCTAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR TCA 90 bp ATAGACTTAAAGAGTTACAATGCTAAGCTAAGCACAAGTGATCATCCTAGAGTATATCACTTATGTCACTaGCATATGAGTCATCATCAG +
Preference number: 4 (lower is better)
Translates to: IDLKSYNAKLSTSDHPRVYHLCH*HMSHHQ
Trigger: CTGATGATGACTCATATGTCAGTGACATAAGTGATA...TACTCTAGGATGATCACTTGTGCTTAGCTTAGCATTGTAACTCTTTAAGTCTAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp ATAGACTTAAAGAGTTACAATGCTAAGCTAAGCACAAGTGATCATCCTAGAGTACGGTGTCAAGGTCTATaGATTTTGATGACTTCTTTA +
Preference number: 4 (lower is better)
Translates to: IDLKSYNAKLSTSDHPRVRCQGL*ILMTSL
Trigger: TAAAGAAGTCATCAAAATGCATAGACCTTGACACCG...TACTCTAGGATGATCACTTGTGCTTAGCTTAGCATTGTAACTCTTTAAGTCTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp ATAGACTTAAAGAGTTACAATGCTAAGCTAAGCACAAGTGATCATCCTAGAGTATCTGCTTTGATATACTaGTACGCTTCCTACTTGAAA +
Preference number: 4 (lower is better)
Translates to: IDLKSYNAKLSTSDHPRVSALIY*YASYLK
Trigger: TTTCAAGTAGGAAGCGTAGCAGTATATCAAAGCAGA...TACTCTAGGATGATCACTTGTGCTTAGCTTAGCATTGTAACTCTTTAAGTCTAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR GCA 90 bp CACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTCTTCTTTACGACAGAAGTTGGACATaGTTTGATAACACAATTCAA +
Preference number: 4 (lower is better)
Translates to: HFRRQAQEKYTNVIFLLYDRSWT*FDNTIQ
Trigger: TTGAATTGTGTTATCAAAGCATGTCCAACTTCTGTC...GTAAAGAAGAAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313367.7
CDS-3UTR CCA 90 bp ATAGACTTAAAGAGTTACAATGCTAAGCTAAGCACAAGTGATCATCCTAGAGTATATCGGTTTGGCTCTTaGCATATTTCAAGATTCCTT +
Preference number: 4 (lower is better)
Translates to: IDLKSYNAKLSTSDHPRVYRFGS*HISRFL
Trigger: AAGGAATCTTGAAATATGCCAAGAGCCAAACCGATA...TACTCTAGGATGATCACTTGTGCTTAGCTTAGCATTGTAACTCTTTAAGTCTAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp ATAGACTTAAAGAGTTACAATGCTAAGCTAAGCACAAGTGATCATCCTAGAGTAATGGGTTGTGCCAATTaGAACAATTTCCATGGATTT +
Preference number: 4 (lower is better)
Translates to: IDLKSYNAKLSTSDHPRVMGCAN*NNFHGF
Trigger: AAATCCATGGAAATTGTTCCAATTGGCACAACCCAT...TACTCTAGGATGATCACTTGTGCTTAGCTTAGCATTGTAACTCTTTAAGTCTAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CCA 90 bp ATAGACTTAAAGAGTTACAATGCTAAGCTAAGCACAAGTGATCATCCTAGAGTATTCCTACTGTCTCTCTaGGATGCTATTGTGATATTT +
Preference number: 4 (lower is better)
Translates to: IDLKSYNAKLSTSDHPRVFLLSL*DAIVIF
Trigger: AAATATCACAATAGCATCCCAGAGAGACAGTAGGAA...TACTCTAGGATGATCACTTGTGCTTAGCTTAGCATTGTAACTCTTTAAGTCTAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313367.7
CDS CCA 90 bp GGCCCAAAGGAAACCCTAAAACCTCACCGAGCTGGGCACCGCGCGTaGCTCGCTGGGCTCAGCGCCTGGGACGGAGTAAGGGCTCCACAG +
Preference number: 5 (lower is better)
Translates to: GPKETLKPHRAGHRA*LAGLSAWDGVRAPQ
Trigger: CTGTGGAGCCCTTACTCCGTCCCAGGCGCTGAGCCCAGCGAGCCACGCGCGGTGCCCAGCTCGGTGAGGTTTTAGGGTTTCCTTTGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415952.1
CDS CCA 90 bp ACAGGGGCTGTCTCTCTGATGGGCCCCGTGAATGGCCTCGTGGCTTaGGGACCGAGGCTGGACAGTGGCAAGGGAAGGCTGACTCCTCAC +
Preference number: 5 (lower is better)
Translates to: TGAVSLMGPVNGLVA*GPRLDSGKGRLTPH
Trigger: GTGAGGAGTCAGCCTTCCCTTGCCACTGTCCAGCCTCGGTCCCCAAGCCACGAGGCCATTCACGGGGCCCATCAGAGAGACAGCCCCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp CCACAGAACAGAACTACCCCAGGCACCAAGTGCCACGGAGAAGCACCCCAACCCGAATGGCCTCGTGGCTaGGGGACCGAGGCTGGACAG +
Preference number: 5 (lower is better)
Translates to: PQNRTTPGTKCHGEAPQPEWPRG*GTEAGQ
Trigger: CTGTCCAGCCTCGGTCCCCAAGCCACGAGGCCATTC...GGGTTGGGGTGCTTCTCCGTGGCACTTGGTGCCTGGGGTAGTTCTGTTCTGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS CCA 90 bp GGAAACCCTAAAACCTCACCGAGCTGGGCACCGCGCGTGGCTCGCTaGGCTCAGCGCCTGGGACGGAGTAAGGGCTCCACAGTGTTAAAT +
Preference number: 5 (lower is better)
Translates to: GNPKTSPSWAPRVAR*AQRLGRSKGSTVLN
Trigger: ATTTAACACTGTGGAGCCCTTACTCCGTCCCAGGCGCTGAGCCCAGCGAGCCACGCGCGGTGCCCAGCTCGGTGAGGTTTTAGGGTTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415952.1
CDS-3UTR CAA 90 bp CCCACAGAACAGAACTACCCCAGGCACCAAGTGCCACGGAGAAGCACCCCAACCACCGGCATGGCCACCTaGGACAGGTCCTTCCCGATG +
Preference number: 5 (lower is better)
Translates to: PTEQNYPRHQVPRRSTPTTGMAT*DRSFPM
Trigger: CATCGGGAAGGACCTGTCCAAGGTGGCCATGCCGGT...GGTTGGGGTGCTTCTCCGTGGCACTTGGTGCCTGGGGTAGTTCTGTTCTGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp CCCACAGAACAGAACTACCCCAGGCACCAAGTGCCACGGAGAAGCACCCCAACCGGAATCTGCGCGGCCTaGTCCAGGAGCTCGCTGTAC +
Preference number: 5 (lower is better)
Translates to: PTEQNYPRHQVPRRSTPTGICAA*SRSSLY
Trigger: GTACAGCGAGCTCCTGGACAAGGCCGCGCAGATTCC...GGTTGGGGTGCTTCTCCGTGGCACTTGGTGCCTGGGGTAGTTCTGTTCTGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp GCCGTTGCTCACCCAAGAGTCATCGTCGGATTTCCTGAAAAACCGAGGCTGGTGGAATGGCCTCGTGGCTaGGGGACCGAGGCTGGACAG +
Preference number: 5 (lower is better)
Translates to: AVAHPRVIVGFPEKPRLVEWPRG*GTEAGQ
Trigger: CTGTCCAGCCTCGGTCCCCAAGCCACGAGGCCATTC...CACCAGCCTCGGTTTTTCAGGAAATCCGACGATGACTCTTGGGTGAGCAACGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp GCCGTTGCTCACCCAAGAGTCATCGTCGGATTTCCTGAAAAACCGAGGCTGGTGAGATTGTCACCCGACTaGGCGACAGCGGGGGAGTCG +
Preference number: 5 (lower is better)
Translates to: AVAHPRVIVGFPEKPRLVRLSPD*ATAGES
Trigger: CGACTCCCCCGCTGTCGCCAAGTCGGGTGACAATCT...CACCAGCCTCGGTTTTTCAGGAAATCCGACGATGACTCTTGGGTGAGCAACGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000409452.5
ENST00000409863.5
CDS-3UTR CAA 90 bp CCGTTGCTCACCCAAGAGTCATCGTCGGATTTCCTGAAAAACCGAGGCTGGTGCACCGGCATGGCCACCTaGGACAGGTCCTTCCCGATG +
Preference number: 5 (lower is better)
Translates to: PLLTQESSSDFLKNRGWCTGMAT*DRSFPM
Trigger: CATCGGGAAGGACCTGTCCAAGGTGGCCATGCCGGT...GCACCAGCCTCGGTTTTTCAGGAAATCCGACGATGACTCTTGGGTGAGCAACGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS TCA 90 bp TTTTGTGCTAGGGCGGATGACAGGGCGTTCTTCAGACCAATGACCTaGGCAGACGGGGAGGAGGAGGCATCCTGCTCCATCAGCTGCTTC +
Preference number: 5 (lower is better)
Translates to: FCARADDRAFFRPMT*ADGEEEASCSISCF
Trigger: GAAGCAGCTGATGGAGCAGGATGCCTCCTCCTCCCCGTCTGCTCAGGTCATTGGTCTGAAGAACGCCCTGTCATCCGCCCTAGCACAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409863.5
CDS TCA 90 bp CTGTGTTTTGTGCTAGGGCGGATGACAGGGCGTTCTTCAGACCAATaGCCTGAGCAGACGGGGAGGAGGAGGCATCCTGCTCCATCAGCT +
Preference number: 5 (lower is better)
Translates to: LCFVLGRMTGRSSDQ*PEQTGRRRHPAPSA
Trigger: AGCTGATGGAGCAGGATGCCTCCTCCTCCCCGTCTGCTCAGGTCATTGGTCTGAAGAACGCCCTGTCATCCGCCCTAGCACAAAACACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409863.5
CDS-3UTR CAA 90 bp CCCACAGAACAGAACTACCCCAGGCACCAAGTGCCACGGAGAAGCACCCCAACCGTCCTGTCGACTTCCTaGCTTGGAAGAGCAGCTACT +
Preference number: 5 (lower is better)
Translates to: PTEQNYPRHQVPRRSTPTVLSTS*LGRAAT
Trigger: AGTAGCTGCTCTTCCAAGCAAGGAAGTCGACAGGAC...GGTTGGGGTGCTTCTCCGTGGCACTTGGTGCCTGGGGTAGTTCTGTTCTGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp CCCACAGAACAGAACTACCCCAGGCACCAAGTGCCACGGAGAAGCACCCCAACCCAGTGCGCCAGGTCTTaGGAGCATTTTTCCATGTCC +
Preference number: 5 (lower is better)
Translates to: PTEQNYPRHQVPRRSTPTQCARS*EHFSMS
Trigger: GGACATGGAAAAATGCTCCAAAGACCTGGCGCACTG...GGTTGGGGTGCTTCTCCGTGGCACTTGGTGCCTGGGGTAGTTCTGTTCTGTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp CCACAGAACAGAACTACCCCAGGCACCAAGTGCCACGGAGAAGCACCCCAACCCCAGTGCGCCAGGTCTTaGGAGCATTTTTCCATGTCC +
Preference number: 5 (lower is better)
Translates to: PQNRTTPGTKCHGEAPQPQCARS*EHFSMS
Trigger: GGACATGGAAAAATGCTCCAAAGACCTGGCGCACTG...GGGTTGGGGTGCTTCTCCGTGGCACTTGGTGCCTGGGGTAGTTCTGTTCTGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp GCCCTAAAGACATGTTTTCCAGCCGGGCACATCGGAACAATCAGCCAGAAGGCTGGAATCTGCGCGGCCTaGTCCAGGAGCTCGCTGTAC +
Preference number: 5 (lower is better)
Translates to: ALKTCFPAGHIGTISQKAGICAA*SRSSLY
Trigger: GTACAGCGAGCTCCTGGACAAGGCCGCGCAGATTCC...AGCCTTCTGGCTGATTGTTCCGATGTGCCCGGCTGGAAAACATGTCTTTAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp CACAAACCCACAGAACAGAACTACCCCAGGCACCAAGTGCCACGGAGAAGCACCGGGACCTGGATGGCGTaGATAGCTGGTGCCGAGTAT +
Preference number: 5 (lower is better)
Translates to: HKPTEQNYPRHQVPRRSTGTWMA*IAGAEY
Trigger: ATACTCGGCACCAGCTATCAACGCCATCCAGGTCCC...GGTGCTTCTCCGTGGCACTTGGTGCCTGGGGTAGTTCTGTTCTGTGGGTTTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409555.5
ENST00000409863.5
CDS TCA 90 bp TCTCTGGAGTTTTCGGATGACAGGGCGTTCTTCAGACCAATGACCTaGGCAGACGGGGAGGAGGAGGCATCCTGCTCCATCAGCTGCTTC +
Preference number: 5 (lower is better)
Translates to: SLEFSDDRAFFRPMT*ADGEEEASCSISCF
Trigger: GAAGCAGCTGATGGAGCAGGATGCCTCCTCCTCCCCGTCTGCTCAGGTCATTGGTCTGAAGAACGCCCTGTCATCCGAAAACTCCAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396429.5
ENST00000409069.5
ENST00000409555.5
ENST00000409759.5
CDS GCA 90 bp GATCCACCCTGGATGGCGTTGATAGCTGGTGCCGAGTATGTCCGATaGAGGACGTCCATGCTTTGCAGGAGCTGGCTCATTTCTACCAGG +
Preference number: 5 (lower is better)
Translates to: DPPWMALIAGAEYVR*RTSMLCRSWLISTR
Trigger: CCTGGTAGAAATGAGCCAGCTCCTGCAAAGCATGGACGTCCTGCATCGGACATACTCGGCACCAGCTATCAACGCCATCCAGGGTGGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313367.7
ENST00000396429.5
ENST00000409452.5
ENST00000409759.5
CDS GCA 90 bp TTCGGGACCTGGATGGCGTTGATAGCTGGTGCCGAGTATGTCCGATaGAGGACGTCCATGCTTTGCAGGAGCTGGCTCATTTCTACCAGG +
Preference number: 5 (lower is better)
Translates to: FGTWMALIAGAEYVR*RTSMLCRSWLISTR
Trigger: CCTGGTAGAAATGAGCCAGCTCCTGCAAAGCATGGACGTCCTGCATCGGACATACTCGGCACCAGCTATCAACGCCATCCAGGTCCCGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396431.5
ENST00000409069.5
ENST00000409555.5
ENST00000409863.5
CDS-3UTR CAA 90 bp CCCACAGAACAGAACTACCCCAGGCACCAAGTGCCACGGAGAAGCACCCCAACCTGTCGACTTCCTTGCTaGGAAGAGCAGCTACTTGTG +
Preference number: 5 (lower is better)
Translates to: PTEQNYPRHQVPRRSTPTCRLPC*EEQLLV
Trigger: CACAAGTAGCTGCTCTTCCAAGCAAGGAAGTCGACA...GGTTGGGGTGCTTCTCCGTGGCACTTGGTGCCTGGGGTAGTTCTGTTCTGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp GCACAAACCCACAGAACAGAACTACCCCAGGCACCAAGTGCCACGGAGAAGCACCAGGACGTCCATGCTTaGCAGGAGCTGGCTCATTTC +
Preference number: 5 (lower is better)
Translates to: AQTHRTELPQAPSATEKHQDVHA*QELAHF
Trigger: GAAATGAGCCAGCTCCTGCAAAGCATGGACGTCCTG...GTGCTTCTCCGTGGCACTTGGTGCCTGGGGTAGTTCTGTTCTGTGGGTTTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS CCA 90 bp CCCGACTTGGCGACAGCGGGGGAGTCGAGGAGCAGAGACTCGGCATaGATTCTGCGTAAGCGTTCTTTAAGATCTGTGTTTTGTGCTAGG +
Preference number: 5 (lower is better)
Translates to: PDLATAGESRSRDSA*ILRKRSLRSVFCAR
Trigger: CCTAGCACAAAACACAGATCTTAAAGAACGCTTACGCAGAATCCATGCCGAGTCTCTGCTCCTCGACTCCCCCGCTGTCGCCAAGTCGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409863.5
ENST00000461835.1
CDS-3UTR CAA 90 bp CCCACAGAACAGAACTACCCCAGGCACCAAGTGCCACGGAGAAGCACCCCAACCTGGAAGAGCAGCTACTaGTGCTCCTTGAAGGTGATA +
Preference number: 5 (lower is better)
Translates to: PTEQNYPRHQVPRRSTPTWKSSY*CSLKVI
Trigger: TATCACCTTCAAGGAGCACAAGTAGCTGCTCTTCCA...GGTTGGGGTGCTTCTCCGTGGCACTTGGTGCCTGGGGTAGTTCTGTTCTGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS TCA 90 bp TTTCATCTCTGGAGTTTTCGGATGACAGGGCGTTCTTCAGACCAATaGCCTGAGCAGACGGGGAGGAGGAGGCATCCTGCTCCATCAGCT +
Preference number: 5 (lower is better)
Translates to: FHLWSFRMTGRSSDQ*PEQTGRRRHPAPSA
Trigger: AGCTGATGGAGCAGGATGCCTCCTCCTCCCCGTCTGCTCAGGTCATTGGTCTGAAGAACGCCCTGTCATCCGAAAACTCCAGAGATGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396429.5
ENST00000409069.5
ENST00000409555.5
ENST00000409759.5
CDS-3UTR CAA 90 bp CCGTTGCTCACCCAAGAGTCATCGTCGGATTTCCTGAAAAACCGAGGCTGGTGCGTCCTGTCGACTTCCTaGCTTGGAAGAGCAGCTACT +
Preference number: 5 (lower is better)
Translates to: PLLTQESSSDFLKNRGWCVLSTS*LGRAAT
Trigger: AGTAGCTGCTCTTCCAAGCAAGGAAGTCGACAGGAC...GCACCAGCCTCGGTTTTTCAGGAAATCCGACGATGACTCTTGGGTGAGCAACGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp CCGTTGCTCACCCAAGAGTCATCGTCGGATTTCCTGAAAAACCGAGGCTGGTGCTTTTCCTCTGCCAGATaGTCACCCGACTTGGCGACA +
Preference number: 5 (lower is better)
Translates to: PLLTQESSSDFLKNRGWCFSSAR*SPDLAT
Trigger: TGTCGCCAAGTCGGGTGACAATCTGGCAGAGGAAAA...GCACCAGCCTCGGTTTTTCAGGAAATCCGACGATGACTCTTGGGTGAGCAACGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409452.5
ENST00000409863.5
CDS-3UTR CAA 90 bp CCCACAGAACAGAACTACCCCAGGCACCAAGTGCCACGGAGAAGCACCCCAACCAAAAACTGGAAGCCCTaGTCCTCCCGAATACATTCA +
Preference number: 5 (lower is better)
Translates to: PTEQNYPRHQVPRRSTPTKNWKP*SSRIHS
Trigger: TGAATGTATTCGGGAGGACAAGGGCTTCCAGTTTTT...GGTTGGGGTGCTTCTCCGTGGCACTTGGTGCCTGGGGTAGTTCTGTTCTGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS TCA 90 bp GGACAGCAAGTCACTTGGCCTCGAGACAATCAAAATGCCATCAGATaGCAAGGGAGCCGAGAGTATGGAAGTCCCCAGTGGCAGGTGGTT +
Preference number: 5 (lower is better)
Translates to: GQQVTWPRDNQNAIR*QGSREYGSPQWQVV
Trigger: AACCACCTGCCACTGGGGACTTCCATACTCTCGGCTCCCTTGTCATCTGATGGCATTTTGATTGTCTCGAGGCCAAGTGACTTGCTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000313367.7
ENST00000396429.5
ENST00000396431.5
ENST00000409069.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
ENST00000415162.5
ENST00000415952.1
ENST00000441059.5
CDS-3UTR CAA 90 bp GCACAAACCCACAGAACAGAACTACCCCAGGCACCAAGTGCCACGGAGAAGCACTGCTACGCTTCCTACTaGAAATGGAGTCAAACACCC +
Preference number: 5 (lower is better)
Translates to: AQTHRTELPQAPSATEKHCYASY*KWSQTP
Trigger: GGGTGTTTGACTCCATTTCAAGTAGGAAGCGTAGCA...GTGCTTCTCCGTGGCACTTGGTGCCTGGGGTAGTTCTGTTCTGTGGGTTTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp GCAGGAATCATCATGCAGGTTCTTGATGACAATCTCTCCATAGTGCTCAATCCAGAATGGCCTCGTGGCTaGGGGACCGAGGCTGGACAG +
Preference number: 5 (lower is better)
Translates to: AGIIMQVLDDNLSIVLNPEWPRG*GTEAGQ
Trigger: CTGTCCAGCCTCGGTCCCCAAGCCACGAGGCCATTC...TGGATTGAGCACTATGGAGAGATTGTCATCAAGAACCTGCATGATGATTCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS TCA 90 bp GCCAACCACCACCTGCAGCGCTCGACGCATTTTCAGTCTCCAAACTaGCCCCAATTCAAGGTTTCTGAGACTCTTTCCGGAGCTATTCTG +
Preference number: 5 (lower is better)
Translates to: ANHHLQRSTHFQSPN*PQFKVSETLSGAIL
Trigger: CAGAATAGCTCCGGAAAGAGTCTCAGAAACCTTGAATTGGGGTCAGTTTGGAGACTGAAAATGCGTCGAGCGCTGCAGGTGGTGGTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415952.1
CDS-3UTR CAA 90 bp CCACAGAACAGAACTACCCCAGGCACCAAGTGCCACGGAGAAGCACCCCAACCCAGCTACTTGTGCTCCTaGAAGGTGATACCAATTTTT +
Preference number: 5 (lower is better)
Translates to: PQNRTTPGTKCHGEAPQPSYLCS*KVIPIF
Trigger: AAAAATTGGTATCACCTTCAAGGAGCACAAGTAGCT...GGGTTGGGGTGCTTCTCCGTGGCACTTGGTGCCTGGGGTAGTTCTGTTCTGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp GCCGTTGCTCACCCAAGAGTCATCGTCGGATTTCCTGAAAAACCGAGGCTGGTGTGGAAGAGCAGCTACTaGTGCTCCTTGAAGGTGATA +
Preference number: 5 (lower is better)
Translates to: AVAHPRVIVGFPEKPRLVWKSSY*CSLKVI
Trigger: TATCACCTTCAAGGAGCACAAGTAGCTGCTCTTCCA...CACCAGCCTCGGTTTTTCAGGAAATCCGACGATGACTCTTGGGTGAGCAACGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp GCCCTAAAGACATGTTTTCCAGCCGGGCACATCGGAACAATCAGCCAGAAGGCTTGTCGACTTCCTTGCTaGGAAGAGCAGCTACTTGTG +
Preference number: 5 (lower is better)
Translates to: ALKTCFPAGHIGTISQKACRLPC*EEQLLV
Trigger: CACAAGTAGCTGCTCTTCCAAGCAAGGAAGTCGACA...AGCCTTCTGGCTGATTGTTCCGATGTGCCCGGCTGGAAAACATGTCTTTAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp CCCACAGAACAGAACTACCCCAGGCACCAAGTGCCACGGAGAAGCACCCCAACCATATCGGTTTGGCTCTaGGCATATTTCAAGATTCCT +
Preference number: 5 (lower is better)
Translates to: PTEQNYPRHQVPRRSTPTISVWL*AYFKIP
Trigger: AGGAATCTTGAAATATGCCAAGAGCCAAACCGATAT...GGTTGGGGTGCTTCTCCGTGGCACTTGGTGCCTGGGGTAGTTCTGTTCTGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS GCA 90 bp CACTCATCATGGACAGCAAGTCACTTGGCCTCGAGACAATCAAAATaGCATCAGATGACAAGGGAGCCGAGAGTATGGAAGTCCCCAGTG +
Preference number: 5 (lower is better)
Translates to: HSSWTASHLASRQSK*HQMTREPRVWKSPV
Trigger: CACTGGGGACTTCCATACTCTCGGCTCCCTTGTCATCTGATGGCATTTTGATTGTCTCGAGGCCAAGTGACTTGCTGTCCATGATGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000313367.7
ENST00000396429.5
ENST00000396431.5
ENST00000409069.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
ENST00000415162.5
ENST00000415952.1
ENST00000441059.5
CDS-3UTR CAA 90 bp GCTCAATCCACCTCTGCCCGCTTAAGATGTTATGGATGCAAGAGGTCACTTTGTCAGGACGTCCATGCTTaGCAGGAGCTGGCTCATTTC +
Preference number: 5 (lower is better)
Translates to: AQSTSARLRCYGCKRSLCQDVHA*QELAHF
Trigger: GAAATGAGCCAGCTCCTGCAAAGCATGGACGTCCTG...ACAAAGTGACCTCTTGCATCCATAACATCTTAAGCGGGCAGAGGTGGATTGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp ACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTAAGATTGTCACCCGACTaGGCGACAGCGGGGGAGTCG +
Preference number: 5 (lower is better)
Translates to: TQVCATSEGKHRRNTLMLRLSPD*ATAGES
Trigger: CGACTCCCCCGCTGTCGCCAAGTCGGGTGACAATCT...TAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409863.5
CDS-3UTR CAA 90 bp CCGTTGCTCACCCAAGAGTCATCGTCGGATTTCCTGAAAAACCGAGGCTGGTGCAAAAACTGGAAGCCCTaGTCCTCCCGAATACATTCA +
Preference number: 5 (lower is better)
Translates to: PLLTQESSSDFLKNRGWCKNWKP*SSRIHS
Trigger: TGAATGTATTCGGGAGGACAAGGGCTTCCAGTTTTT...GCACCAGCCTCGGTTTTTCAGGAAATCCGACGATGACTCTTGGGTGAGCAACGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp CCCACAGAACAGAACTACCCCAGGCACCAAGTGCCACGGAGAAGCACCCCAACCACAATTTCCATGGATTaGCCCCAGAATTTGTTTTTC +
Preference number: 5 (lower is better)
Translates to: PTEQNYPRHQVPRRSTPTTISMD*PQNLFF
Trigger: GAAAAACAAATTCTGGGGCAAATCCATGGAAATTGT...GGTTGGGGTGCTTCTCCGTGGCACTTGGTGCCTGGGGTAGTTCTGTTCTGTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp GCCGTTGCTCACCCAAGAGTCATCGTCGGATTTCCTGAAAAACCGAGGCTGGTGGCAGAGTCACATGGGTaGTGCCAATTGGAACAATTT +
Preference number: 5 (lower is better)
Translates to: AVAHPRVIVGFPEKPRLVAESHG*CQLEQF
Trigger: AAATTGTTCCAATTGGCACAACCCATGTGACTCTGC...CACCAGCCTCGGTTTTTCAGGAAATCCGACGATGACTCTTGGGTGAGCAACGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp GCCGTTGCTCACCCAAGAGTCATCGTCGGATTTCCTGAAAAACCGAGGCTGGTGCCTTTCTCTCTGCAGTaGTTCAATCCTCTGCTTTTG +
Preference number: 5 (lower is better)
Translates to: AVAHPRVIVGFPEKPRLVPFSLQ*FNPLLL
Trigger: CAAAAGCAGAGGATTGAACAACTGCAGAGAGAAAGG...CACCAGCCTCGGTTTTTCAGGAAATCCGACGATGACTCTTGGGTGAGCAACGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS GCA 90 bp CCCAGCTGTCCTGTCGACTTCCTTGCTTGGAAGAGCAGCTACTTGTaGTCCTTGAAGGTGATACCAATTTTTGGGACACACCAAGGTTCT +
Preference number: 5 (lower is better)
Translates to: PSCPVDFLAWKSSYL*SLKVIPIFGTHQGS
Trigger: AGAACCTTGGTGTGTCCCAAAAATTGGTATCACCTTCAAGGAGCACAAGTAGCTGCTCTTCCAAGCAAGGAAGTCGACAGGACAGCTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000313367.7
ENST00000396429.5
ENST00000396431.5
ENST00000409069.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
ENST00000415162.5
ENST00000415952.1
ENST00000441059.5
CDS-3UTR CAA 90 bp GGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTACCGGCATGGCCACCTaGGACAGGTCCTTCCCGATG +
Preference number: 5 (lower is better)
Translates to: GLCHFRRQAQEKYTNVIFTGMAT*DRSFPM
Trigger: CATCGGGAAGGACCTGTCCAAGGTGGCCATGCCGGT...AAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp CTTGTCCTCCCGAATACATTCATATGTTTCTCCAAGAACCGGATTAAATGGCTTGGAATCTGCGCGGCCTaGTCCAGGAGCTCGCTGTAC +
Preference number: 5 (lower is better)
Translates to: LVLPNTFICFSKNRIKWLGICAA*SRSSLY
Trigger: GTACAGCGAGCTCCTGGACAAGGCCGCGCAGATTCC...AAGCCATTTAATCCGGTTCTTGGAGAAACATATGAATGTATTCGGGAGGACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp CACAAACCCACAGAACAGAACTACCCCAGGCACCAAGTGCCACGGAGAAGCACCACAGGATGGTCCAGTTaGGAAAAACCAAGATCTTTT +
Preference number: 5 (lower is better)
Translates to: HKPTEQNYPRHQVPRRSTTGWSS*EKPRSF
Trigger: AAAAGATCTTGGTTTTTCCAAACTGGACCATCCTGT...GGTGCTTCTCCGTGGCACTTGGTGCCTGGGGTAGTTCTGTTCTGTGGGTTTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS TCA 90 bp ATTAAATGGCTTGCTTCCAGCTCGGTAGTAGCTAGATGCATACGCTaGTATGGCAAAGGCTGCCACATATACCATCCTTTCCAGGGGGCT +
Preference number: 5 (lower is better)
Translates to: IKWLASSSVVARCIR*YGKGCHIYHPFQGA
Trigger: AGCCCCCTGGAAAGGATGGTATATGTGGCAGCCTTTGCCATATCAGCGTATGCATCTAGCTACTACCGAGCTGGAAGCAAGCCATTTAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313367.7
ENST00000396429.5
ENST00000396431.5
ENST00000409069.5
CDS-3UTR CAA 90 bp TGTTTCTCCAAGAACCGGATTAAATGGCTTGCTTCCAGCTCGGTAGTAGCTAGAGTCCTGTCGACTTCCTaGCTTGGAAGAGCAGCTACT +
Preference number: 5 (lower is better)
Translates to: CFSKNRIKWLASSSVVARVLSTS*LGRAAT
Trigger: AGTAGCTGCTCTTCCAAGCAAGGAAGTCGACAGGAC...TCTAGCTACTACCGAGCTGGAAGCAAGCCATTTAATCCGGTTCTTGGAGAAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp CCGTTGCTCACCCAAGAGTCATCGTCGGATTTCCTGAAAAACCGAGGCTGGTGCATATCGGTTTGGCTCTaGGCATATTTCAAGATTCCT +
Preference number: 5 (lower is better)
Translates to: PLLTQESSSDFLKNRGWCISVWL*AYFKIP
Trigger: AGGAATCTTGAAATATGCCAAGAGCCAAACCGATAT...GCACCAGCCTCGGTTTTTCAGGAAATCCGACGATGACTCTTGGGTGAGCAACGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp GCACAAACCCACAGAACAGAACTACCCCAGGCACCAAGTGCCACGGAGAAGCACCAAGGTCTATGCATTTaGATGACTTCTTTACAGACA +
Preference number: 5 (lower is better)
Translates to: AQTHRTELPQAPSATEKHQGLCI*MTSLQT
Trigger: TGTCTGTAAAGAAGTCATCAAAATGCATAGACCTTG...GTGCTTCTCCGTGGCACTTGGTGCCTGGGGTAGTTCTGTTCTGTGGGTTTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp AAATATATAAACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACAGATTGTCACCCGACTaGGCGACAGCGGGGGAGTCG +
Preference number: 5 (lower is better)
Translates to: KYINTGLCHFRRQAQEKYRLSPD*ATAGES
Trigger: CGACTCCCCCGCTGTCGCCAAGTCGGGTGACAATCT...GTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGTTTATATATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409863.5
CDS-3UTR CAA 90 bp AAATATATAAACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACGGAATCTGCGCGGCCTaGTCCAGGAGCTCGCTGTAC +
Preference number: 5 (lower is better)
Translates to: KYINTGLCHFRRQAQEKYGICAA*SRSSLY
Trigger: GTACAGCGAGCTCCTGGACAAGGCCGCGCAGATTCC...GTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGTTTATATATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp CCGTTGCTCACCCAAGAGTCATCGTCGGATTTCCTGAAAAACCGAGGCTGGTGCTATATAAACACAGGTTaGTGCCACTTCAGAAGGCAA +
Preference number: 5 (lower is better)
Translates to: PLLTQESSSDFLKNRGWCYINTG*CHFRRQ
Trigger: TTGCCTTCTGAAGTGGCACAAACCTGTGTTTATATA...GCACCAGCCTCGGTTTTTCAGGAAATCCGACGATGACTCTTGGGTGAGCAACGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp GGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTCAAGGAATACCAGCCTaGGGGTGCTTTGGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: GLCHFRRQAQEKYTNVIFQGIPA*GCFGAW
Trigger: CCAGGCCCCAAAGCACCCCAAGGCTGGTATTCCTTG...AAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313367.7
CDS-3UTR CAA 90 bp GCCGTTGCTCACCCAAGAGTCATCGTCGGATTTCCTGAAAAACCGAGGCTGGTGCAAGGTCTATGCATTTaGATGACTTCTTTACAGACA +
Preference number: 5 (lower is better)
Translates to: AVAHPRVIVGFPEKPRLVQGLCI*MTSLQT
Trigger: TGTCTGTAAAGAAGTCATCAAAATGCATAGACCTTG...CACCAGCCTCGGTTTTTCAGGAAATCCGACGATGACTCTTGGGTGAGCAACGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp GCTCAATCCACCTCTGCCCGCTTAAGATGTTATGGATGCAAGAGGTCACTTTGTTGCTACGCTTCCTACTaGAAATGGAGTCAAACACCC +
Preference number: 5 (lower is better)
Translates to: AQSTSARLRCYGCKRSLCCYASY*KWSQTP
Trigger: GGGTGTTTGACTCCATTTCAAGTAGGAAGCGTAGCA...ACAAAGTGACCTCTTGCATCCATAACATCTTAAGCGGGCAGAGGTGGATTGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp ACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTACAGGACGTCCATGCTTaGCAGGAGCTGGCTCATTTC +
Preference number: 5 (lower is better)
Translates to: TQVCATSEGKHRRNTLMLQDVHA*QELAHF
Trigger: GAAATGAGCCAGCTCCTGCAAAGCATGGACGTCCTG...TAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp GGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTCCACCCTGGATGGCGTaGATAGCTGGTGCCGAGTAT +
Preference number: 5 (lower is better)
Translates to: GLCHFRRQAQEKYTNVIFPPWMA*IAGAEY
Trigger: ATACTCGGCACCAGCTATCAACGCCATCCAGGGTGG...AAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313367.7
ENST00000409452.5
ENST00000409759.5
CDS-3UTR CAA 90 bp CTTGTCCTCCCGAATACATTCATATGTTTCTCCAAGAACCGGATTAAATGGCTTCCACCCTGGATGGCGTaGATAGCTGGTGCCGAGTAT +
Preference number: 5 (lower is better)
Translates to: LVLPNTFICFSKNRIKWLPPWMA*IAGAEY
Trigger: ATACTCGGCACCAGCTATCAACGCCATCCAGGGTGG...AAGCCATTTAATCCGGTTCTTGGAGAAACATATGAATGTATTCGGGAGGACAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409452.5
ENST00000409759.5
CDS-3UTR CAA 90 bp TTTCACCATAAGACAGGATGGTCCAGTTTGGAAAAACCAAGATCTTTTCTAAGTAGATTGTCACCCGACTaGGCGACAGCGGGGGAGTCG +
Preference number: 5 (lower is better)
Translates to: FHHKTGWSSLEKPRSFLSRLSPD*ATAGES
Trigger: CGACTCCCCCGCTGTCGCCAAGTCGGGTGACAATCT...ACTTAGAAAAGATCTTGGTTTTTCCAAACTGGACCATCCTGTCTTATGGTGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000409452.5
ENST00000409863.5
CDS-3UTR CAA 90 bp GCAGGAATCATCATGCAGGTTCTTGATGACAATCTCTCCATAGTGCTCAATCCAAGGTCCTTCCCGATGTaGTTCCTCAGGATGTTCCAC +
Preference number: 5 (lower is better)
Translates to: AGIIMQVLDDNLSIVLNPRSFPM*FLRMFH
Trigger: GTGGAACATCCTGAGGAACAACATCGGGAAGGACCT...TGGATTGAGCACTATGGAGAGATTGTCATCAAGAACCTGCATGATGATTCCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp CACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTCTTCTTTACGGAATCTGCGCGGCCTaGTCCAGGAGCTCGCTGTAC +
Preference number: 5 (lower is better)
Translates to: HFRRQAQEKYTNVIFLLYGICAA*SRSSLY
Trigger: GTACAGCGAGCTCCTGGACAAGGCCGCGCAGATTCC...GTAAAGAAGAAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp GGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTCACCTGTGCGGCTGTTaGGGCATCCTGGGTACTTCT +
Preference number: 5 (lower is better)
Translates to: GLCHFRRQAQEKYTNVIFHLCGC*GILGTS
Trigger: AGAAGTACCCAGGATGCCCAAACAGCCGCACAGGTG...AAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313367.7
CDS CCA 90 bp TCGAGACAATCAAAATGCCATCAGATGACAAGGGAGCCGAGAGTATaGAAGTCCCCAGTGGCAGGTGGTTTAGCTCTTATCCAAAGTATT +
Preference number: 5 (lower is better)
Translates to: SRQSKCHQMTREPRV*KSPVAGGLALIQSI
Trigger: AATACTTTGGATAAGAGCTAAACCACCTGCCACTGGGGACTTCCATACTCTCGGCTCCCTTGTCATCTGATGGCATTTTGATTGTCTCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000415162.5
ENST00000415952.1
ENST00000441059.5
CDS-3UTR CAA 90 bp TGTTTCTCCAAGAACCGGATTAAATGGCTTGCTTCCAGCTCGGTAGTAGCTAGATGGACAGCAAGTCACTaGGCCTCGAGACAATCAAAA +
Preference number: 5 (lower is better)
Translates to: CFSKNRIKWLASSSVVARWTASH*ASRQSK
Trigger: TTTTGATTGTCTCGAGGCCAAGTGACTTGCTGTCCA...TCTAGCTACTACCGAGCTGGAAGCAAGCCATTTAATCCGGTTCTTGGAGAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp TTCCCTTCCTCTAGAAACCTCTGGTCTGGCCTAAATCGAGTGTCAGTAGGTGGCAGCTACTTGTGCTCCTaGAAGGTGATACCAATTTTT +
Preference number: 5 (lower is better)
Translates to: FPSSRNLWSGLNRVSVGGSYLCS*KVIPIF
Trigger: AAAAATTGGTATCACCTTCAAGGAGCACAAGTAGCT...GCCACCTACTGACACTCGATTTAGGCCAGACCAGAGGTTTCTAGAGGAAGGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp CCCAGGGAAGTAAAAATAAACATGCAGACAGCCCTAAAGACATGTTTTCCAGCCTGTCGACTTCCTTGCTaGGAAGAGCAGCTACTTGTG +
Preference number: 5 (lower is better)
Translates to: PREVKINMQTALKTCFPACRLPC*EEQLLV
Trigger: CACAAGTAGCTGCTCTTCCAAGCAAGGAAGTCGACA...GGCTGGAAAACATGTCTTTAGGGCTGTCTGCATGTTTATTTTTACTTCCCTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp TTCCCTTCCTCTAGAAACCTCTGGTCTGGCCTAAATCGAGTGTCAGTAGGTGGCTCTCTCTATATCGGTTaGGCTCTTGGCATATTTCAA +
Preference number: 5 (lower is better)
Translates to: FPSSRNLWSGLNRVSVGGSLYIG*ALGIFQ
Trigger: TTGAAATATGCCAAGAGCCAAACCGATATAGAGAGA...GCCACCTACTGACACTCGATTTAGGCCAGACCAGAGGTTTCTAGAGGAAGGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp GGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTCAGGACGTCCATGCTTaGCAGGAGCTGGCTCATTTC +
Preference number: 5 (lower is better)
Translates to: GLCHFRRQAQEKYTNVIFQDVHA*QELAHF
Trigger: GAAATGAGCCAGCTCCTGCAAAGCATGGACGTCCTG...AAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp TTCCCTTCCTCTAGAAACCTCTGGTCTGGCCTAAATCGAGTGTCAGTAGGTGGCGTTGACAAATTAGGATaGGAGGAGTGTAGTCTTACT +
Preference number: 5 (lower is better)
Translates to: FPSSRNLWSGLNRVSVGGVDKLG*EECSLT
Trigger: AGTAAGACTACACTCCTCCAATCCTAATTTGTCAAC...GCCACCTACTGACACTCGATTTAGGCCAGACCAGAGGTTTCTAGAGGAAGGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp ACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATTTTCCTCTGCCAGATaGTCACCCGACTTGGCGACA +
Preference number: 5 (lower is better)
Translates to: TQVCATSEGKHRRNTLMLFSSAR*SPDLAT
Trigger: TGTCGCCAAGTCGGGTGACAATCTGGCAGAGGAAAA...TAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409863.5
CDS-3UTR CAA 90 bp CTTAACTTCTCAAGGACTCAGCTCTCACTAAGGAGAAATTTCCTACTGTCTCTCAGGTCCTTCCCGATGTaGTTCCTCAGGATGTTCCAC +
Preference number: 5 (lower is better)
Translates to: LNFSRTQLSLRRNFLLSLRSFPM*FLRMFH
Trigger: GTGGAACATCCTGAGGAACAACATCGGGAAGGACCT...GAGAGACAGTAGGAAATTTCTCCTTAGTGAGAGCTGAGTCCTTGAGAAGTTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313367.7
CDS-3UTR CAA 90 bp ACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTAAGGTCCTTCCCGATGTaGTTCCTCAGGATGTTCCAC +
Preference number: 5 (lower is better)
Translates to: TQVCATSEGKHRRNTLMLRSFPM*FLRMFH
Trigger: GTGGAACATCCTGAGGAACAACATCGGGAAGGACCT...TAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp AAATATATAAACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACGGGACCTGGATGGCGTaGATAGCTGGTGCCGAGTAT +
Preference number: 5 (lower is better)
Translates to: KYINTGLCHFRRQAQEKYGTWMA*IAGAEY
Trigger: ATACTCGGCACCAGCTATCAACGCCATCCAGGTCCC...GTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGTTTATATATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396431.5
ENST00000409555.5
ENST00000409863.5
CDS GCA 90 bp ATTTTGATGACTTCTTTACAGACATCACTGAGAGCCCGACATCAATaGAGCCATGCAGCTTCTCTCTCTCTATATCGGTTTGGCTCTTGG +
Preference number: 5 (lower is better)
Translates to: ILMTSLQTSLRARHQ*SHAASLSLYRFGSW
Trigger: CCAAGAGCCAAACCGATATAGAGAGAGAGAAGCTGCATGGCTGCATTGATGTCGGGCTCTCAGTGATGTCTGTAAAGAAGTCATCAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000313367.7
ENST00000396429.5
ENST00000396431.5
ENST00000409069.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp ACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATGTCGACTTCCTTGCTaGGAAGAGCAGCTACTTGTG +
Preference number: 5 (lower is better)
Translates to: TQVCATSEGKHRRNTLMLCRLPC*EEQLLV
Trigger: CACAAGTAGCTGCTCTTCCAAGCAAGGAAGTCGACA...TAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp TTCTGTCCACCCAGGGAAGTAAAAATAAACATGCAGACAGCCCTAAAGACATGTTGTCGACTTCCTTGCTaGGAAGAGCAGCTACTTGTG +
Preference number: 5 (lower is better)
Translates to: FCPPREVKINMQTALKTCCRLPC*EEQLLV
Trigger: CACAAGTAGCTGCTCTTCCAAGCAAGGAAGTCGACA...ACATGTCTTTAGGGCTGTCTGCATGTTTATTTTTACTTCCCTGGGTGGACAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp AAGATCTTTTCTAAGTTCCAAATAGGTGCCGTTGCTCACCCAAGAGTCATCGTCTGCTACGCTTCCTACTaGAAATGGAGTCAAACACCC +
Preference number: 5 (lower is better)
Translates to: KIFSKFQIGAVAHPRVIVCYASY*KWSQTP
Trigger: GGGTGTTTGACTCCATTTCAAGTAGGAAGCGTAGCA...GACGATGACTCTTGGGTGAGCAACGGCACCTATTTGGAACTTAGAAAAGATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp CTTGTCCTCCCGAATACATTCATATGTTTCTCCAAGAACCGGATTAAATGGCTTCAGTGCGCCAGGTCTTaGGAGCATTTTTCCATGTCC +
Preference number: 5 (lower is better)
Translates to: LVLPNTFICFSKNRIKWLQCARS*EHFSMS
Trigger: GGACATGGAAAAATGCTCCAAAGACCTGGCGCACTG...AAGCCATTTAATCCGGTTCTTGGAGAAACATATGAATGTATTCGGGAGGACAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp CTTAACTTCTCAAGGACTCAGCTCTCACTAAGGAGAAATTTCCTACTGTCTCTCGTTCCTTTAGCATCTTaGCCAATAGCTCTGGACCGC +
Preference number: 5 (lower is better)
Translates to: LNFSRTQLSLRRNFLLSLVPLAS*PIALDR
Trigger: GCGGTCCAGAGCTATTGGCAAAGATGCTAAAGGAAC...GAGAGACAGTAGGAAATTTCTCCTTAGTGAGAGCTGAGTCCTTGAGAAGTTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313367.7
CDS-3UTR CAA 90 bp CTTGTCCTCCCGAATACATTCATATGTTTCTCCAAGAACCGGATTAAATGGCTTAGGTCCTTCCCGATGTaGTTCCTCAGGATGTTCCAC +
Preference number: 5 (lower is better)
Translates to: LVLPNTFICFSKNRIKWLRSFPM*FLRMFH
Trigger: GTGGAACATCCTGAGGAACAACATCGGGAAGGACCT...AAGCCATTTAATCCGGTTCTTGGAGAAACATATGAATGTATTCGGGAGGACAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp TGTTTCTCCAAGAACCGGATTAAATGGCTTGCTTCCAGCTCGGTAGTAGCTAGAAAAAACTGGAAGCCCTaGTCCTCCCGAATACATTCA +
Preference number: 5 (lower is better)
Translates to: CFSKNRIKWLASSSVVARKNWKP*SSRIHS
Trigger: TGAATGTATTCGGGAGGACAAGGGCTTCCAGTTTTT...TCTAGCTACTACCGAGCTGGAAGCAAGCCATTTAATCCGGTTCTTGGAGAAACA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp AAACTGGAAGCCCTTGTCCTCCCGAATACATTCATATGTTTCTCCAAGAACCGGAAAAACTGGAAGCCCTaGTCCTCCCGAATACATTCA +
Preference number: 5 (lower is better)
Translates to: KLEALVLPNTFICFSKNRKNWKP*SSRIHS
Trigger: TGAATGTATTCGGGAGGACAAGGGCTTCCAGTTTTT...CCGGTTCTTGGAGAAACATATGAATGTATTCGGGAGGACAAGGGCTTCCAGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp TTCCCTTCCTCTAGAAACCTCTGGTCTGGCCTAAATCGAGTGTCAGTAGGTGGCACAATTTCCATGGATTaGCCCCAGAATTTGTTTTTC +
Preference number: 5 (lower is better)
Translates to: FPSSRNLWSGLNRVSVGGTISMD*PQNLFF
Trigger: GAAAAACAAATTCTGGGGCAAATCCATGGAAATTGT...GCCACCTACTGACACTCGATTTAGGCCAGACCAGAGGTTTCTAGAGGAAGGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp AAACTGGAAGCCCTTGTCCTCCCGAATACATTCATATGTTTCTCCAAGAACCGGTGTGAAGCTATAGTATaGCTCGTAGCCTTTCGGCAT +
Preference number: 5 (lower is better)
Translates to: KLEALVLPNTFICFSKNRCEAIV*LVAFRH
Trigger: ATGCCGAAAGGCTACGAGCAATACTATAGCTTCACA...CCGGTTCTTGGAGAAACATATGAATGTATTCGGGAGGACAAGGGCTTCCAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp ACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATGGACAGCAAGTCACTaGGCCTCGAGACAATCAAAA +
Preference number: 5 (lower is better)
Translates to: TQVCATSEGKHRRNTLMLWTASH*ASRQSK
Trigger: TTTTGATTGTCTCGAGGCCAAGTGACTTGCTGTCCA...TAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp TTCTGTCCACCCAGGGAAGTAAAAATAAACATGCAGACAGCCCTAAAGACATGTTGGACAGCAAGTCACTaGGCCTCGAGACAATCAAAA +
Preference number: 5 (lower is better)
Translates to: FCPPREVKINMQTALKTCWTASH*ASRQSK
Trigger: TTTTGATTGTCTCGAGGCCAAGTGACTTGCTGTCCA...ACATGTCTTTAGGGCTGTCTGCATGTTTATTTTTACTTCCCTGGGTGGACAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp ACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATGCTACGCTTCCTACTaGAAATGGAGTCAAACACCC +
Preference number: 5 (lower is better)
Translates to: TQVCATSEGKHRRNTLMLCYASY*KWSQTP
Trigger: GGGTGTTTGACTCCATTTCAAGTAGGAAGCGTAGCA...TAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp AAATATATAAACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACCAGTGCGCCAGGTCTTaGGAGCATTTTTCCATGTCC +
Preference number: 5 (lower is better)
Translates to: KYINTGLCHFRRQAQEKYQCARS*EHFSMS
Trigger: GGACATGGAAAAATGCTCCAAAGACCTGGCGCACTG...GTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGTTTATATATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp CACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTCTTCTTTACCAGGACGTCCATGCTTaGCAGGAGCTGGCTCATTTC +
Preference number: 5 (lower is better)
Translates to: HFRRQAQEKYTNVIFLLYQDVHA*QELAHF
Trigger: GAAATGAGCCAGCTCCTGCAAAGCATGGACGTCCTG...GTAAAGAAGAAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp ATAGACTTAAAGAGTTACAATGCTAAGCTAAGCACAAGTGATCATCCTAGAGTACCACCCTGGATGGCGTaGATAGCTGGTGCCGAGTAT +
Preference number: 5 (lower is better)
Translates to: IDLKSYNAKLSTSDHPRVPPWMA*IAGAEY
Trigger: ATACTCGGCACCAGCTATCAACGCCATCCAGGGTGG...TACTCTAGGATGATCACTTGTGCTTAGCTTAGCATTGTAACTCTTTAAGTCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313367.7
ENST00000409452.5
ENST00000409759.5
CDS-3UTR CAA 90 bp AAATATATAAACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACAGGTCCTTCCCGATGTaGTTCCTCAGGATGTTCCAC +
Preference number: 5 (lower is better)
Translates to: KYINTGLCHFRRQAQEKYRSFPM*FLRMFH
Trigger: GTGGAACATCCTGAGGAACAACATCGGGAAGGACCT...GTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGTTTATATATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp AAGATCTTTTCTAAGTTCCAAATAGGTGCCGTTGCTCACCCAAGAGTCATCGTCGCAGAGTCACATGGGTaGTGCCAATTGGAACAATTT +
Preference number: 5 (lower is better)
Translates to: KIFSKFQIGAVAHPRVIVAESHG*CQLEQF
Trigger: AAATTGTTCCAATTGGCACAACCCATGTGACTCTGC...GACGATGACTCTTGGGTGAGCAACGGCACCTATTTGGAACTTAGAAAAGATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp CCCAGGGAAGTAAAAATAAACATGCAGACAGCCCTAAAGACATGTTTTCCAGCCCCTTTCTCTCTGCAGTaGTTCAATCCTCTGCTTTTG +
Preference number: 5 (lower is better)
Translates to: PREVKINMQTALKTCFPAPFSLQ*FNPLLL
Trigger: CAAAAGCAGAGGATTGAACAACTGCAGAGAGAAAGG...GGCTGGAAAACATGTCTTTAGGGCTGTCTGCATGTTTATTTTTACTTCCCTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp GCTCAATCCACCTCTGCCCGCTTAAGATGTTATGGATGCAAGAGGTCACTTTGTACAGGATGGTCCAGTTaGGAAAAACCAAGATCTTTT +
Preference number: 5 (lower is better)
Translates to: AQSTSARLRCYGCKRSLCTGWSS*EKPRSF
Trigger: AAAAGATCTTGGTTTTTCCAAACTGGACCATCCTGT...ACAAAGTGACCTCTTGCATCCATAACATCTTAAGCGGGCAGAGGTGGATTGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp CACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTCTTCTTTACCATCCTGGGTACTTCTaGCCCTCAGGTGAACTCCCA +
Preference number: 5 (lower is better)
Translates to: HFRRQAQEKYTNVIFLLYHPGYF*PSGELP
Trigger: TGGGAGTTCACCTGAGGGCAAGAAGTACCCAGGATG...GTAAAGAAGAAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313367.7
CDS-3UTR CAA 90 bp ATAGACTTAAAGAGTTACAATGCTAAGCTAAGCACAAGTGATCATCCTAGAGTAGGGACCTGGATGGCGTaGATAGCTGGTGCCGAGTAT +
Preference number: 5 (lower is better)
Translates to: IDLKSYNAKLSTSDHPRVGTWMA*IAGAEY
Trigger: ATACTCGGCACCAGCTATCAACGCCATCCAGGTCCC...TACTCTAGGATGATCACTTGTGCTTAGCTTAGCATTGTAACTCTTTAAGTCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396431.5
ENST00000409863.5
CDS-3UTR CAA 90 bp GGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTTGGAAGAGCAGCTACTaGTGCTCCTTGAAGGTGATA +
Preference number: 5 (lower is better)
Translates to: GLCHFRRQAQEKYTNVIFWKSSY*CSLKVI
Trigger: TATCACCTTCAAGGAGCACAAGTAGCTGCTCTTCCA...AAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp AAATATATAAACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACTGTCGACTTCCTTGCTaGGAAGAGCAGCTACTTGTG +
Preference number: 5 (lower is better)
Translates to: KYINTGLCHFRRQAQEKYCRLPC*EEQLLV
Trigger: CACAAGTAGCTGCTCTTCCAAGCAAGGAAGTCGACA...GTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGTTTATATATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp CACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTCTTCTTTACGTCCTGTCGACTTCCTaGCTTGGAAGAGCAGCTACT +
Preference number: 5 (lower is better)
Translates to: HFRRQAQEKYTNVIFLLYVLSTS*LGRAAT
Trigger: AGTAGCTGCTCTTCCAAGCAAGGAAGTCGACAGGAC...GTAAAGAAGAAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp TTTCACCATAAGACAGGATGGTCCAGTTTGGAAAAACCAAGATCTTTTCTAAGTGTCCTGTCGACTTCCTaGCTTGGAAGAGCAGCTACT +
Preference number: 5 (lower is better)
Translates to: FHHKTGWSSLEKPRSFLSVLSTS*LGRAAT
Trigger: AGTAGCTGCTCTTCCAAGCAAGGAAGTCGACAGGAC...ACTTAGAAAAGATCTTGGTTTTTCCAAACTGGACCATCCTGTCTTATGGTGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp AAACTGGAAGCCCTTGTCCTCCCGAATACATTCATATGTTTCTCCAAGAACCGGATATCGGTTTGGCTCTaGGCATATTTCAAGATTCCT +
Preference number: 5 (lower is better)
Translates to: KLEALVLPNTFICFSKNRISVWL*AYFKIP
Trigger: AGGAATCTTGAAATATGCCAAGAGCCAAACCGATAT...CCGGTTCTTGGAGAAACATATGAATGTATTCGGGAGGACAAGGGCTTCCAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp TGTTTCTCCAAGAACCGGATTAAATGGCTTGCTTCCAGCTCGGTAGTAGCTAGAATATCGGTTTGGCTCTaGGCATATTTCAAGATTCCT +
Preference number: 5 (lower is better)
Translates to: CFSKNRIKWLASSSVVARISVWL*AYFKIP
Trigger: AGGAATCTTGAAATATGCCAAGAGCCAAACCGATAT...TCTAGCTACTACCGAGCTGGAAGCAAGCCATTTAATCCGGTTCTTGGAGAAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp AAACTGGAAGCCCTTGTCCTCCCGAATACATTCATATGTTTCTCCAAGAACCGGTCTCTCTATATCGGTTaGGCTCTTGGCATATTTCAA +
Preference number: 5 (lower is better)
Translates to: KLEALVLPNTFICFSKNRSLYIG*ALGIFQ
Trigger: TTGAAATATGCCAAGAGCCAAACCGATATAGAGAGA...CCGGTTCTTGGAGAAACATATGAATGTATTCGGGAGGACAAGGGCTTCCAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp TGTTTCTCCAAGAACCGGATTAAATGGCTTGCTTCCAGCTCGGTAGTAGCTAGAGTTGACAAATTAGGATaGGAGGAGTGTAGTCTTACT +
Preference number: 5 (lower is better)
Translates to: CFSKNRIKWLASSSVVARVDKLG*EECSLT
Trigger: AGTAAGACTACACTCCTCCAATCCTAATTTGTCAAC...TCTAGCTACTACCGAGCTGGAAGCAAGCCATTTAATCCGGTTCTTGGAGAAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp GCAGGAATCATCATGCAGGTTCTTGATGACAATCTCTCCATAGTGCTCAATCCACATGGGTTGTGCCAATaGGAACAATTTCCATGGATT +
Preference number: 5 (lower is better)
Translates to: AGIIMQVLDDNLSIVLNPHGLCQ*EQFPWI
Trigger: AATCCATGGAAATTGTTCCAATTGGCACAACCCATG...TGGATTGAGCACTATGGAGAGATTGTCATCAAGAACCTGCATGATGATTCCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp CTTAACTTCTCAAGGACTCAGCTCTCACTAAGGAGAAATTTCCTACTGTCTCTCGCAGAGTCACATGGGTaGTGCCAATTGGAACAATTT +
Preference number: 5 (lower is better)
Translates to: LNFSRTQLSLRRNFLLSLAESHG*CQLEQF
Trigger: AAATTGTTCCAATTGGCACAACCCATGTGACTCTGC...GAGAGACAGTAGGAAATTTCTCCTTAGTGAGAGCTGAGTCCTTGAGAAGTTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313367.7
CDS-3UTR CAA 90 bp ACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTAGCAGAGTCACATGGGTaGTGCCAATTGGAACAATTT +
Preference number: 5 (lower is better)
Translates to: TQVCATSEGKHRRNTLMLAESHG*CQLEQF
Trigger: AAATTGTTCCAATTGGCACAACCCATGTGACTCTGC...TAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp TTCTGTCCACCCAGGGAAGTAAAAATAAACATGCAGACAGCCCTAAAGACATGTGCAGAGTCACATGGGTaGTGCCAATTGGAACAATTT +
Preference number: 5 (lower is better)
Translates to: FCPPREVKINMQTALKTCAESHG*CQLEQF
Trigger: AAATTGTTCCAATTGGCACAACCCATGTGACTCTGC...ACATGTCTTTAGGGCTGTCTGCATGTTTATTTTTACTTCCCTGGGTGGACAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp ACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATGTGAAGCTATAGTATaGCTCGTAGCCTTTCGGCAT +
Preference number: 5 (lower is better)
Translates to: TQVCATSEGKHRRNTLMLCEAIV*LVAFRH
Trigger: ATGCCGAAAGGCTACGAGCAATACTATAGCTTCACA...TAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp AAACTGGAAGCCCTTGTCCTCCCGAATACATTCATATGTTTCTCCAAGAACCGGACAGGATGGTCCAGTTaGGAAAAACCAAGATCTTTT +
Preference number: 5 (lower is better)
Translates to: KLEALVLPNTFICFSKNRTGWSS*EKPRSF
Trigger: AAAAGATCTTGGTTTTTCCAAACTGGACCATCCTGT...CCGGTTCTTGGAGAAACATATGAATGTATTCGGGAGGACAAGGGCTTCCAGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp CTTAACTTCTCAAGGACTCAGCTCTCACTAAGGAGAAATTTCCTACTGTCTCTCATTAATAGGAGCTTTTaGGGGAGGCAGAGGTATGGA +
Preference number: 5 (lower is better)
Translates to: LNFSRTQLSLRRNFLLSLINRSF*GRQRYG
Trigger: TCCATACCTCTGCCTCCCCAAAAAGCTCCTATTAAT...GAGAGACAGTAGGAAATTTCTCCTTAGTGAGAGCTGAGTCCTTGAGAAGTTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313367.7
CDS-3UTR CAA 90 bp GCAGGAATCATCATGCAGGTTCTTGATGACAATCTCTCCATAGTGCTCAATCCAAGCTACTTGTGCTCCTaGAAGGTGATACCAATTTTT +
Preference number: 5 (lower is better)
Translates to: AGIIMQVLDDNLSIVLNPSYLCS*KVIPIF
Trigger: AAAAATTGGTATCACCTTCAAGGAGCACAAGTAGCT...TGGATTGAGCACTATGGAGAGATTGTCATCAAGAACCTGCATGATGATTCCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp AAATATATAAACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACTGGAAGAGCAGCTACTaGTGCTCCTTGAAGGTGATA +
Preference number: 5 (lower is better)
Translates to: KYINTGLCHFRRQAQEKYWKSSY*CSLKVI
Trigger: TATCACCTTCAAGGAGCACAAGTAGCTGCTCTTCCA...GTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGTTTATATATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp ATAGACTTAAAGAGTTACAATGCTAAGCTAAGCACAAGTGATCATCCTAGAGTAGTCCTGTCGACTTCCTaGCTTGGAAGAGCAGCTACT +
Preference number: 5 (lower is better)
Translates to: IDLKSYNAKLSTSDHPRVVLSTS*LGRAAT
Trigger: AGTAGCTGCTCTTCCAAGCAAGGAAGTCGACAGGAC...TACTCTAGGATGATCACTTGTGCTTAGCTTAGCATTGTAACTCTTTAAGTCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp AAGATCTTTTCTAAGTTCCAAATAGGTGCCGTTGCTCACCCAAGAGTCATCGTCTCTCTCTATATCGGTTaGGCTCTTGGCATATTTCAA +
Preference number: 5 (lower is better)
Translates to: KIFSKFQIGAVAHPRVIVSLYIG*ALGIFQ
Trigger: TTGAAATATGCCAAGAGCCAAACCGATATAGAGAGA...GACGATGACTCTTGGGTGAGCAACGGCACCTATTTGGAACTTAGAAAAGATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp ATAGACTTAAAGAGTTACAATGCTAAGCTAAGCACAAGTGATCATCCTAGAGTACAGTGCGCCAGGTCTTaGGAGCATTTTTCCATGTCC +
Preference number: 5 (lower is better)
Translates to: IDLKSYNAKLSTSDHPRVQCARS*EHFSMS
Trigger: GGACATGGAAAAATGCTCCAAAGACCTGGCGCACTG...TACTCTAGGATGATCACTTGTGCTTAGCTTAGCATTGTAACTCTTTAAGTCTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp TTTCACCATAAGACAGGATGGTCCAGTTTGGAAAAACCAAGATCTTTTCTAAGTGTTCCTTTAGCATCTTaGCCAATAGCTCTGGACCGC +
Preference number: 5 (lower is better)
Translates to: FHHKTGWSSLEKPRSFLSVPLAS*PIALDR
Trigger: GCGGTCCAGAGCTATTGGCAAAGATGCTAAAGGAAC...ACTTAGAAAAGATCTTGGTTTTTCCAAACTGGACCATCCTGTCTTATGGTGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409452.5
ENST00000409759.5
CDS-3UTR CAA 90 bp ATAGACTTAAAGAGTTACAATGCTAAGCTAAGCACAAGTGATCATCCTAGAGTATTTTCCTCTGCCAGATaGTCACCCGACTTGGCGACA +
Preference number: 5 (lower is better)
Translates to: IDLKSYNAKLSTSDHPRVFSSAR*SPDLAT
Trigger: TGTCGCCAAGTCGGGTGACAATCTGGCAGAGGAAAA...TACTCTAGGATGATCACTTGTGCTTAGCTTAGCATTGTAACTCTTTAAGTCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409863.5
CDS-3UTR CAA 90 bp ATAGACTTAAAGAGTTACAATGCTAAGCTAAGCACAAGTGATCATCCTAGAGTAAGGTCCTTCCCGATGTaGTTCCTCAGGATGTTCCAC +
Preference number: 5 (lower is better)
Translates to: IDLKSYNAKLSTSDHPRVRSFPM*FLRMFH
Trigger: GTGGAACATCCTGAGGAACAACATCGGGAAGGACCT...TACTCTAGGATGATCACTTGTGCTTAGCTTAGCATTGTAACTCTTTAAGTCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp GGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTAAAAACTGGAAGCCCTaGTCCTCCCGAATACATTCA +
Preference number: 5 (lower is better)
Translates to: GLCHFRRQAQEKYTNVIFKNWKP*SSRIHS
Trigger: TGAATGTATTCGGGAGGACAAGGGCTTCCAGTTTTT...AAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp AAACTGGAAGCCCTTGTCCTCCCGAATACATTCATATGTTTCTCCAAGAACCGGACAATTTCCATGGATTaGCCCCAGAATTTGTTTTTC +
Preference number: 5 (lower is better)
Translates to: KLEALVLPNTFICFSKNRTISMD*PQNLFF
Trigger: GAAAAACAAATTCTGGGGCAAATCCATGGAAATTGT...CCGGTTCTTGGAGAAACATATGAATGTATTCGGGAGGACAAGGGCTTCCAGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp GGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTGCAGAGTCACATGGGTaGTGCCAATTGGAACAATTT +
Preference number: 5 (lower is better)
Translates to: GLCHFRRQAQEKYTNVIFAESHG*CQLEQF
Trigger: AAATTGTTCCAATTGGCACAACCCATGTGACTCTGC...AAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp CTTGTCCTCCCGAATACATTCATATGTTTCTCCAAGAACCGGATTAAATGGCTTTGTGAAGCTATAGTATaGCTCGTAGCCTTTCGGCAT +
Preference number: 5 (lower is better)
Translates to: LVLPNTFICFSKNRIKWLCEAIV*LVAFRH
Trigger: ATGCCGAAAGGCTACGAGCAATACTATAGCTTCACA...AAGCCATTTAATCCGGTTCTTGGAGAAACATATGAATGTATTCGGGAGGACAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp GGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTCCTTTCTCTCTGCAGTaGTTCAATCCTCTGCTTTTG +
Preference number: 5 (lower is better)
Translates to: GLCHFRRQAQEKYTNVIFPFSLQ*FNPLLL
Trigger: CAAAAGCAGAGGATTGAACAACTGCAGAGAGAAAGG...AAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp CACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTCTTCTTTACTGGACAGCAAGTCACTaGGCCTCGAGACAATCAAAA +
Preference number: 5 (lower is better)
Translates to: HFRRQAQEKYTNVIFLLYWTASH*ASRQSK
Trigger: TTTTGATTGTCTCGAGGCCAAGTGACTTGCTGTCCA...GTAAAGAAGAAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp ACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTAAGCTACTTGTGCTCCTaGAAGGTGATACCAATTTTT +
Preference number: 5 (lower is better)
Translates to: TQVCATSEGKHRRNTLMLSYLCS*KVIPIF
Trigger: AAAAATTGGTATCACCTTCAAGGAGCACAAGTAGCT...TAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp TTCTGTCCACCCAGGGAAGTAAAAATAAACATGCAGACAGCCCTAAAGACATGTAGCTACTTGTGCTCCTaGAAGGTGATACCAATTTTT +
Preference number: 5 (lower is better)
Translates to: FCPPREVKINMQTALKTCSYLCS*KVIPIF
Trigger: AAAAATTGGTATCACCTTCAAGGAGCACAAGTAGCT...ACATGTCTTTAGGGCTGTCTGCATGTTTATTTTTACTTCCCTGGGTGGACAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp CACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTCTTCTTTACTGGAAGAGCAGCTACTaGTGCTCCTTGAAGGTGATA +
Preference number: 5 (lower is better)
Translates to: HFRRQAQEKYTNVIFLLYWKSSY*CSLKVI
Trigger: TATCACCTTCAAGGAGCACAAGTAGCTGCTCTTCCA...GTAAAGAAGAAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp TTTCACCATAAGACAGGATGGTCCAGTTTGGAAAAACCAAGATCTTTTCTAAGTTGGAAGAGCAGCTACTaGTGCTCCTTGAAGGTGATA +
Preference number: 5 (lower is better)
Translates to: FHHKTGWSSLEKPRSFLSWKSSY*CSLKVI
Trigger: TATCACCTTCAAGGAGCACAAGTAGCTGCTCTTCCA...ACTTAGAAAAGATCTTGGTTTTTCCAAACTGGACCATCCTGTCTTATGGTGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp AAAGGGGTAAGACACTCACTTAAAGCTTTACCAGAACACAACACAAAGCAAGAAAAAAACTGGAAGCCCTaGTCCTCCCGAATACATTCA +
Preference number: 5 (lower is better)
Translates to: KGVRHSLKALPEHNTKQEKNWKP*SSRIHS
Trigger: TGAATGTATTCGGGAGGACAAGGGCTTCCAGTTTTT...TTCTTGCTTTGTGTTGTGTTCTGGTAAAGCTTTAAGTGAGTGTCTTACCCCTTT
41% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000313367.7
CDS-3UTR CAA 90 bp GCAGGAATCATCATGCAGGTTCTTGATGACAATCTCTCCATAGTGCTCAATCCAACAATTTCCATGGATTaGCCCCAGAATTTGTTTTTC +
Preference number: 5 (lower is better)
Translates to: AGIIMQVLDDNLSIVLNPTISMD*PQNLFF
Trigger: GAAAAACAAATTCTGGGGCAAATCCATGGAAATTGT...TGGATTGAGCACTATGGAGAGATTGTCATCAAGAACCTGCATGATGATTCCTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp GGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTCATGGGTTGTGCCAATaGGAACAATTTCCATGGATT +
Preference number: 5 (lower is better)
Translates to: GLCHFRRQAQEKYTNVIFHGLCQ*EQFPWI
Trigger: AATCCATGGAAATTGTTCCAATTGGCACAACCCATG...AAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp CTTGTCCTCCCGAATACATTCATATGTTTCTCCAAGAACCGGATTAAATGGCTTCATGGGTTGTGCCAATaGGAACAATTTCCATGGATT +
Preference number: 5 (lower is better)
Translates to: LVLPNTFICFSKNRIKWLHGLCQ*EQFPWI
Trigger: AATCCATGGAAATTGTTCCAATTGGCACAACCCATG...AAGCCATTTAATCCGGTTCTTGGAGAAACATATGAATGTATTCGGGAGGACAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp AAATATATAAACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACTGTGAAGCTATAGTATaGCTCGTAGCCTTTCGGCAT +
Preference number: 5 (lower is better)
Translates to: KYINTGLCHFRRQAQEKYCEAIV*LVAFRH
Trigger: ATGCCGAAAGGCTACGAGCAATACTATAGCTTCACA...GTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGTTTATATATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp AAATATATAAACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACCCTTTCTCTCTGCAGTaGTTCAATCCTCTGCTTTTG +
Preference number: 5 (lower is better)
Translates to: KYINTGLCHFRRQAQEKYPFSLQ*FNPLLL
Trigger: CAAAAGCAGAGGATTGAACAACTGCAGAGAGAAAGG...GTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGTTTATATATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp ACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTAACAGGATGGTCCAGTTaGGAAAAACCAAGATCTTTT +
Preference number: 5 (lower is better)
Translates to: TQVCATSEGKHRRNTLMLTGWSS*EKPRSF
Trigger: AAAAGATCTTGGTTTTTCCAAACTGGACCATCCTGT...TAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp ACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATATATAAACACAGGTTaGTGCCACTTCAGAAGGCAA +
Preference number: 5 (lower is better)
Translates to: TQVCATSEGKHRRNTLMLYINTG*CHFRRQ
Trigger: TTGCCTTCTGAAGTGGCACAAACCTGTGTTTATATA...TAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp ATAGACTTAAAGAGTTACAATGCTAAGCTAAGCACAAGTGATCATCCTAGAGTATGGACAGCAAGTCACTaGGCCTCGAGACAATCAAAA +
Preference number: 5 (lower is better)
Translates to: IDLKSYNAKLSTSDHPRVWTASH*ASRQSK
Trigger: TTTTGATTGTCTCGAGGCCAAGTGACTTGCTGTCCA...TACTCTAGGATGATCACTTGTGCTTAGCTTAGCATTGTAACTCTTTAAGTCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp GGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTATATCGGTTTGGCTCTaGGCATATTTCAAGATTCCT +
Preference number: 5 (lower is better)
Translates to: GLCHFRRQAQEKYTNVIFISVWL*AYFKIP
Trigger: AGGAATCTTGAAATATGCCAAGAGCCAAACCGATAT...AAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp GGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTTCTCTCTATATCGGTTaGGCTCTTGGCATATTTCAA +
Preference number: 5 (lower is better)
Translates to: GLCHFRRQAQEKYTNVIFSLYIG*ALGIFQ
Trigger: TTGAAATATGCCAAGAGCCAAACCGATATAGAGAGA...AAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp ACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTACAAGGTCTATGCATTTaGATGACTTCTTTACAGACA +
Preference number: 5 (lower is better)
Translates to: TQVCATSEGKHRRNTLMLQGLCI*MTSLQT
Trigger: TGTCTGTAAAGAAGTCATCAAAATGCATAGACCTTG...TAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp ATAGACTTAAAGAGTTACAATGCTAAGCTAAGCACAAGTGATCATCCTAGAGTATGCTACGCTTCCTACTaGAAATGGAGTCAAACACCC +
Preference number: 5 (lower is better)
Translates to: IDLKSYNAKLSTSDHPRVCYASY*KWSQTP
Trigger: GGGTGTTTGACTCCATTTCAAGTAGGAAGCGTAGCA...TACTCTAGGATGATCACTTGTGCTTAGCTTAGCATTGTAACTCTTTAAGTCTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp CACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTCTTCTTTACTGTGAAGCTATAGTATaGCTCGTAGCCTTTCGGCAT +
Preference number: 5 (lower is better)
Translates to: HFRRQAQEKYTNVIFLLYCEAIV*LVAFRH
Trigger: ATGCCGAAAGGCTACGAGCAATACTATAGCTTCACA...GTAAAGAAGAAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp GGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTACAGGATGGTCCAGTTaGGAAAAACCAAGATCTTTT +
Preference number: 5 (lower is better)
Translates to: GLCHFRRQAQEKYTNVIFTGWSS*EKPRSF
Trigger: AAAAGATCTTGGTTTTTCCAAACTGGACCATCCTGT...AAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp CTTGTCCTCCCGAATACATTCATATGTTTCTCCAAGAACCGGATTAAATGGCTTTATATAAACACAGGTTaGTGCCACTTCAGAAGGCAA +
Preference number: 5 (lower is better)
Translates to: LVLPNTFICFSKNRIKWLYINTG*CHFRRQ
Trigger: TTGCCTTCTGAAGTGGCACAAACCTGTGTTTATATA...AAGCCATTTAATCCGGTTCTTGGAGAAACATATGAATGTATTCGGGAGGACAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp CACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTCTTCTTTACGCTACCAAATTAAACTaGGGTAGCTTACGCATGGGT +
Preference number: 5 (lower is better)
Translates to: HFRRQAQEKYTNVIFLLYATKLN*GSLRMG
Trigger: ACCCATGCGTAAGCTACCCAAGTTTAATTTGGTAGC...GTAAAGAAGAAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313367.7
CDS-3UTR CAA 90 bp GGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTTTCAGGCTGTGCATTTaGTTTTCGTTGCTTCTTTCT +
Preference number: 5 (lower is better)
Translates to: GLCHFRRQAQEKYTNVIFFRLCI*FSLLLS
Trigger: AGAAAGAAGCAACGAAAACAAAATGCACAGCCTGAA...AAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000313367.7
CDS-3UTR CAA 90 bp AAATATATAAACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACGATGGAAGACAGTGCTaGAAGCCCAAACAAATGATT +
Preference number: 5 (lower is better)
Translates to: KYINTGLCHFRRQAQEKYDGRQC*KPKQMI
Trigger: AATCATTTGTTTGGGCTTCAAGCACTGTCTTCCATC...GTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGTTTATATATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313367.7
CDS-3UTR CAA 90 bp AAAGGGGTAAGACACTCACTTAAAGCTTTACCAGAACACAACACAAAGCAAGAAAGCTACTTGTGCTCCTaGAAGGTGATACCAATTTTT +
Preference number: 5 (lower is better)
Translates to: KGVRHSLKALPEHNTKQESYLCS*KVIPIF
Trigger: AAAAATTGGTATCACCTTCAAGGAGCACAAGTAGCT...TTCTTGCTTTGTGTTGTGTTCTGGTAAAGCTTTAAGTGAGTGTCTTACCCCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313367.7
CDS-3UTR CAA 90 bp AAATATATAAACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACATATCGGTTTGGCTCTaGGCATATTTCAAGATTCCT +
Preference number: 5 (lower is better)
Translates to: KYINTGLCHFRRQAQEKYISVWL*AYFKIP
Trigger: AGGAATCTTGAAATATGCCAAGAGCCAAACCGATAT...GTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGTTTATATATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp GGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTCAAGGTCTATGCATTTaGATGACTTCTTTACAGACA +
Preference number: 5 (lower is better)
Translates to: GLCHFRRQAQEKYTNVIFQGLCI*MTSLQT
Trigger: TGTCTGTAAAGAAGTCATCAAAATGCATAGACCTTG...AAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp AAATATATAAACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACGTTGACAAATTAGGATaGGAGGAGTGTAGTCTTACT +
Preference number: 5 (lower is better)
Translates to: KYINTGLCHFRRQAQEKYVDKLG*EECSLT
Trigger: AGTAAGACTACACTCCTCCAATCCTAATTTGTCAAC...GTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGTTTATATATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp CACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTCTTCTTTACCATGGGTTGTGCCAATaGGAACAATTTCCATGGATT +
Preference number: 5 (lower is better)
Translates to: HFRRQAQEKYTNVIFLLYHGLCQ*EQFPWI
Trigger: AATCCATGGAAATTGTTCCAATTGGCACAACCCATG...GTAAAGAAGAAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS GCA 90 bp ACCATAATGGAACTCGTGTCTCACCACCACAAGAAAATGATACATTaGTTCCAGTTTGAAATAAATTCTGCTTTGATATACTGCTACGCT +
Preference number: 5 (lower is better)
Translates to: TIMELVSHHHKKMIH*FQFEINSALIYCYA
Trigger: AGCGTAGCAGTATATCAAAGCAGAATTTATTTCAAACTGGAAGCAATGTATCATTTTCTTGTGGTGGTGAGACACGAGTTCCATTATGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000313367.7
ENST00000396429.5
ENST00000396431.5
ENST00000409069.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp CACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTCTTCTTTACTCTCTCTATATCGGTTaGGCTCTTGGCATATTTCAA +
Preference number: 5 (lower is better)
Translates to: HFRRQAQEKYTNVIFLLYSLYIG*ALGIFQ
Trigger: TTGAAATATGCCAAGAGCCAAACCGATATAGAGAGA...GTAAAGAAGAAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp AAAGGGGTAAGACACTCACTTAAAGCTTTACCAGAACACAACACAAAGCAAGAACAAGGTCTATGCATTTaGATGACTTCTTTACAGACA +
Preference number: 5 (lower is better)
Translates to: KGVRHSLKALPEHNTKQEQGLCI*MTSLQT
Trigger: TGTCTGTAAAGAAGTCATCAAAATGCATAGACCTTG...TTCTTGCTTTGTGTTGTGTTCTGGTAAAGCTTTAAGTGAGTGTCTTACCCCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313367.7
CDS-3UTR CAA 90 bp CACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTCTTCTTTACGTTGACAAATTAGGATaGGAGGAGTGTAGTCTTACT +
Preference number: 5 (lower is better)
Translates to: HFRRQAQEKYTNVIFLLYVDKLG*EECSLT
Trigger: AGTAAGACTACACTCCTCCAATCCTAATTTGTCAAC...GTAAAGAAGAAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp TTTCACCATAAGACAGGATGGTCCAGTTTGGAAAAACCAAGATCTTTTCTAAGTGTTGACAAATTAGGATaGGAGGAGTGTAGTCTTACT +
Preference number: 5 (lower is better)
Translates to: FHHKTGWSSLEKPRSFLSVDKLG*EECSLT
Trigger: AGTAAGACTACACTCCTCCAATCCTAATTTGTCAAC...ACTTAGAAAAGATCTTGGTTTTTCCAAACTGGACCATCCTGTCTTATGGTGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp AAATATATAAACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACACAATTTCCATGGATTaGCCCCAGAATTTGTTTTTC +
Preference number: 5 (lower is better)
Translates to: KYINTGLCHFRRQAQEKYTISMD*PQNLFF
Trigger: GAAAAACAAATTCTGGGGCAAATCCATGGAAATTGT...GTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGTTTATATATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp TTTCACCATAAGACAGGATGGTCCAGTTTGGAAAAACCAAGATCTTTTCTAAGTACAGGATGGTCCAGTTaGGAAAAACCAAGATCTTTT +
Preference number: 5 (lower is better)
Translates to: FHHKTGWSSLEKPRSFLSTGWSS*EKPRSF
Trigger: AAAAGATCTTGGTTTTTCCAAACTGGACCATCCTGT...ACTTAGAAAAGATCTTGGTTTTTCCAAACTGGACCATCCTGTCTTATGGTGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp TTTCACCATAAGACAGGATGGTCCAGTTTGGAAAAACCAAGATCTTTTCTAAGTTATATAAACACAGGTTaGTGCCACTTCAGAAGGCAA +
Preference number: 5 (lower is better)
Translates to: FHHKTGWSSLEKPRSFLSYINTG*CHFRRQ
Trigger: TTGCCTTCTGAAGTGGCACAAACCTGTGTTTATATA...ACTTAGAAAAGATCTTGGTTTTTCCAAACTGGACCATCCTGTCTTATGGTGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS-3UTR CAA 90 bp AAATATATAAACACAGGTTTGTGCCACTTCAGAAGGCAAGCACAGGAGAAATACATCAATTCTCTACATTaGTCTATAAGGCAGATGGCA +
Preference number: 5 (lower is better)
Translates to: KYINTGLCHFRRQAQEKYINSLH*SIRQMA
Trigger: TGCCATCTGCCTTATAGACAAATGTAGAGAATTGAT...GTATTTCTCCTGTGCTTGCCTTCTGAAGTGGCACAAACCTGTGTTTATATATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313367.7
CDS-3UTR CAA 90 bp CACTTCAGAAGGCAAGCACAGGAGAAATACACTAATGTTATCTTTCTTCTTTACGAAGTTGGACATGCTTaGATAACACAATTCAACTAC +
Preference number: 5 (lower is better)
Translates to: HFRRQAQEKYTNVIFLLYEVGHA*ITQFNY
Trigger: GTAGTTGAATTGTGTTATCAAAGCATGTCCAACTTC...GTAAAGAAGAAAGATAACATTAGTGTATTTCTCCTGTGCTTGCCTTCTGAAGTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313367.7
CDS-3UTR CAA 90 bp ATAGACTTAAAGAGTTACAATGCTAAGCTAAGCACAAGTGATCATCCTAGAGTAACAATTTCCATGGATTaGCCCCAGAATTTGTTTTTC +
Preference number: 5 (lower is better)
Translates to: IDLKSYNAKLSTSDHPRVTISMD*PQNLFF
Trigger: GAAAAACAAATTCTGGGGCAAATCCATGGAAATTGT...TACTCTAGGATGATCACTTGTGCTTAGCTTAGCATTGTAACTCTTTAAGTCTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409759.5
ENST00000409863.5
CDS GCA 72 bp GCCACTTGCAGACAGACTGCGGGGCCGGAGCCGCGCTaGGCACCGGCCGCGAAGCGCTCAAGTCCCCTCTCC +
Preference number: 6 (lower is better)
Translates to: ATCRQTAGPEPR*APAAKRSSPLS
Trigger: GGAGAGGGGACTTGAGCGCTTCGCGGCCGGTGCGCAGCGCGGCTCCGGCCCCGCAGTCTGTCTGCAAGTGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313367.7
CDS CCA 72 bp AAAACCTCACCGAGCTGGGCACCGCGCGTGGCTCGCTaGGCTCAGCGCCTGGGACGGAGTAAGGGCTCCACA +
Preference number: 6 (lower is better)
Translates to: KTSPSWAPRVAR*AQRLGRSKGST
Trigger: TGTGGAGCCCTTACTCCGTCCCAGGCGCTGAGCCCAGCGAGCCACGCGCGGTGCCCAGCTCGGTGAGGTTTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415952.1
CDS CCA 72 bp GAAACCCTAAAACCTCACCGAGCTGGGCACCGCGCGTaGCTCGCTGGGCTCAGCGCCTGGGACGGAGTAAGG +
Preference number: 6 (lower is better)
Translates to: ETLKPHRAGHRA*LAGLSAWDGVR
Trigger: CCTTACTCCGTCCCAGGCGCTGAGCCCAGCGAGCCACGCGCGGTGCCCAGCTCGGTGAGGTTTTAGGGTTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415952.1
CDS CCA 72 bp GTCTCTCTGATGGGCCCCGTGAATGGCCTCGTGGCTTaGGGACCGAGGCTGGACAGTGGCAAGGGAAGGCTG +
Preference number: 6 (lower is better)
Translates to: VSLMGPVNGLVA*GPRLDSGKGRL
Trigger: CAGCCTTCCCTTGCCACTGTCCAGCCTCGGTCCCCAAGCCACGAGGCCATTCACGGGGCCCATCAGAGAGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS CAA 72 bp TGTCTCTCTGATGGGCCCCGTGAATGGCCTCGTGGCTaGGGGACCGAGGCTGGACAGTGGCAAGGGAAGGCT +
Preference number: 6 (lower is better)
Translates to: CLSDGPREWPRG*GTEAGQWQGKA
Trigger: AGCCTTCCCTTGCCACTGTCCAGCCTCGGTCCCCAAGCCACGAGGCCATTCACGGGGCCCATCAGAGAGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS TCA 72 bp CTTGGGGACCGAGGCTGGACAGTGGCAAGGGAAGGCTaGCTCCTCACCATCCTTTCCAGGGGGCTGGGAATC +
Preference number: 6 (lower is better)
Translates to: LGDRGWTVAREG*LLTILSRGLGI
Trigger: GATTCCCAGCCCCCTGGAAAGGATGGTGAGGAGTCAGCCTTCCCTTGCCACTGTCCAGCCTCGGTCCCCAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS TCA 72 bp AGGGCGGATGACAGGGCGTTCTTCAGACCAATGACCTaGGCAGACGGGGAGGAGGAGGCATCCTGCTCCATC +
Preference number: 6 (lower is better)
Translates to: RADDRAFFRPMT*ADGEEEASCSI
Trigger: GATGGAGCAGGATGCCTCCTCCTCCCCGTCTGCTCAGGTCATTGGTCTGAAGAACGCCCTGTCATCCGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409863.5
CDS CCA 72 bp CTCTGGAGTTTTCCTCTGCCAGATTGTCACCCGACTTaGCGACAGCGGGGGAGTCGAGGAGCAGAGACTCGG +
Preference number: 6 (lower is better)
Translates to: LWSFPLPDCHPT*RQRGSRGAETR
Trigger: CCGAGTCTCTGCTCCTCGACTCCCCCGCTGTCGCCAAGTCGGGTGACAATCTGGCAGAGGAAAACTCCAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409863.5
ENST00000461835.1
CDS CCA 72 bp GAATGGCCTCGTGGCTTGGGGACCGAGGCTGGACAGTaGCAAGGGAAGGCTGACTCCTCACCATCCTTTCCA +
Preference number: 6 (lower is better)
Translates to: EWPRGLGTEAGQ*QGKADSSPSFP
Trigger: TGGAAAGGATGGTGAGGAGTCAGCCTTCCCTTGCCACTGTCCAGCCTCGGTCCCCAAGCCACGAGGCCATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS CCA 72 bp CAAAGGCTGCCACATATACCATCCTTTCCAGGGGGCTaGGAATCTGCGCGGCCTTGTCCAGGAGCTCGCTGT +
Preference number: 6 (lower is better)
Translates to: QRLPHIPSFPGG*ESARPCPGARC
Trigger: ACAGCGAGCTCCTGGACAAGGCCGCGCAGATTCCCAGCCCCCTGGAAAGGATGGTATATGTGGCAGCCTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313367.7
ENST00000396429.5
ENST00000396431.5
ENST00000409069.5
CDS CAA 72 bp TCTCTGGAGTTTTCCTCTGCCAGATTGTCACCCGACTaGGCGACAGCGGGGGAGTCGAGGAGCAGAGACTCG +
Preference number: 6 (lower is better)
Translates to: SLEFSSARLSPD*ATAGESRSRDS
Trigger: CGAGTCTCTGCTCCTCGACTCCCCCGCTGTCGCCAAGTCGGGTGACAATCTGGCAGAGGAAAACTCCAGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409863.5
ENST00000461835.1
CDS TCA 72 bp TTTTCGGATGACAGGGCGTTCTTCAGACCAATGACCTaGGCAGACGGGGAGGAGGAGGCATCCTGCTCCATC +
Preference number: 6 (lower is better)
Translates to: FSDDRAFFRPMT*ADGEEEASCSI
Trigger: GATGGAGCAGGATGCCTCCTCCTCCCCGTCTGCTCAGGTCATTGGTCTGAAGAACGCCCTGTCATCCGAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396429.5
ENST00000409069.5
ENST00000409555.5
ENST00000409759.5
CDS CAA 90 bp GTTGATAGCTGGTGCCGAGTATGTCCGATGCAGGACGTCCATGCTTaGCAGGAGCTGGCTCATTTCTACCAGGTAGGCATGACAGTGCGC +
Preference number: 6 (lower is better)
Translates to: VDSWCRVCPMQDVHA*QELAHFYQVGMTVR
Trigger: GCGCACTGTCATGCCTACCTGGTAGAAATGAGCCAGCTCCTGCAAAGCATGGACGTCCTGCATCGGACATACTCGGCACCAGCTATCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313367.7
ENST00000396429.5
ENST00000396431.5
ENST00000409069.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS GCA 72 bp TGGATGGCGTTGATAGCTGGTGCCGAGTATGTCCGATaGAGGACGTCCATGCTTTGCAGGAGCTGGCTCATT +
Preference number: 6 (lower is better)
Translates to: WMALIAGAEYVR*RTSMLCRSWLI
Trigger: AATGAGCCAGCTCCTGCAAAGCATGGACGTCCTGCATCGGACATACTCGGCACCAGCTATCAACGCCATCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313367.7
ENST00000396429.5
ENST00000396431.5
ENST00000409069.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS CAA 72 bp TGGTGCCGAGTATGTCCGATGCAGGACGTCCATGCTTaGCAGGAGCTGGCTCATTTCTACCAGGTAGGCATG +
Preference number: 6 (lower is better)
Translates to: WCRVCPMQDVHA*QELAHFYQVGM
Trigger: CATGCCTACCTGGTAGAAATGAGCCAGCTCCTGCAAAGCATGGACGTCCTGCATCGGACATACTCGGCACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313367.7
ENST00000396429.5
ENST00000396431.5
ENST00000409069.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS GCA 72 bp GCAGACGGGGAGGAGGAGGCATCCTGCTCCATCAGCTaGTTCAGTTTCTCTCTCTCCGCTGACATGATATTA +
Preference number: 6 (lower is better)
Translates to: ADGEEEASCSIS*FSFSLSADMIL
Trigger: TAATATCATGTCAGCGGAGAGAGAGAAACTGAAGCAGCTGATGGAGCAGGATGCCTCCTCCTCCCCGTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000313367.7
ENST00000396429.5
ENST00000396431.5
ENST00000409069.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS GCA 72 bp AAAAGGTTTCGGGACCTGGATGGCGTTGATAGCTGGTaGCGAGTATGTCCGATGCAGGACGTCCATGCTTTG +
Preference number: 6 (lower is better)
Translates to: KRFRDLDGVDSW*RVCPMQDVHAL
Trigger: CAAAGCATGGACGTCCTGCATCGGACATACTCGGCACCAGCTATCAACGCCATCCAGGTCCCGAAACCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396431.5
ENST00000409069.5
ENST00000409555.5
ENST00000409863.5
CDS CCA 72 bp GCGACAGCGGGGGAGTCGAGGAGCAGAGACTCGGCATaGATTCTGCGTAAGCGTTCTTTAAGATCTGTGTTT +
Preference number: 6 (lower is better)
Translates to: ATAGESRSRDSA*ILRKRSLRSVF
Trigger: AAACACAGATCTTAAAGAACGCTTACGCAGAATCCATGCCGAGTCTCTGCTCCTCGACTCCCCCGCTGTCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313367.7
ENST00000396431.5
ENST00000409452.5
ENST00000409863.5
ENST00000461835.1
CDS CCA 72 bp AGAAAAAGGTTTCGGGACCTGGATGGCGTTGATAGCTaGTGCCGAGTATGTCCGATGCAGGACGTCCATGCT +
Preference number: 6 (lower is better)
Translates to: RKRFRDLDGVDS*CRVCPMQDVHA
Trigger: AGCATGGACGTCCTGCATCGGACATACTCGGCACCAGCTATCAACGCCATCCAGGTCCCGAAACCTTTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396431.5
ENST00000409069.5
ENST00000409555.5
ENST00000409863.5
CDS TCA 72 bp GTCACTTGGCCTCGAGACAATCAAAATGCCATCAGATaGCAAGGGAGCCGAGAGTATGGAAGTCCCCAGTGG +
Preference number: 6 (lower is better)
Translates to: VTWPRDNQNAIR*QGSREYGSPQW
Trigger: CCACTGGGGACTTCCATACTCTCGGCTCCCTTGTCATCTGATGGCATTTTGATTGTCTCGAGGCCAAGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000313367.7
ENST00000396429.5
ENST00000396431.5
ENST00000409069.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
ENST00000415162.5
ENST00000415952.1
ENST00000441059.5
CDS GCA 72 bp TTCAAAAGATCCACCCTGGATGGCGTTGATAGCTGGTaGCGAGTATGTCCGATGCAGGACGTCCATGCTTTG +
Preference number: 6 (lower is better)
Translates to: FKRSTLDGVDSW*RVCPMQDVHAL
Trigger: CAAAGCATGGACGTCCTGCATCGGACATACTCGGCACCAGCTATCAACGCCATCCAGGGTGGATCTTTTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313367.7
ENST00000396429.5
ENST00000409452.5
ENST00000409759.5
CDS CCA 72 bp ACTTTCAAAAGATCCACCCTGGATGGCGTTGATAGCTaGTGCCGAGTATGTCCGATGCAGGACGTCCATGCT +
Preference number: 6 (lower is better)
Translates to: TFKRSTLDGVDS*CRVCPMQDVHA
Trigger: AGCATGGACGTCCTGCATCGGACATACTCGGCACCAGCTATCAACGCCATCCAGGGTGGATCTTTTGAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313367.7
ENST00000396429.5
ENST00000409452.5
ENST00000409759.5
CDS TCA 72 bp CACCTGCAGCGCTCGACGCATTTTCAGTCTCCAAACTaGCCCCAATTCAAGGTTTCTGAGACTCTTTCCGGA +
Preference number: 6 (lower is better)
Translates to: HLQRSTHFQSPN*PQFKVSETLSG
Trigger: TCCGGAAAGAGTCTCAGAAACCTTGAATTGGGGTCAGTTTGGAGACTGAAAATGCGTCGAGCGCTGCAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415952.1
CDS GCA 72 bp ACAGACATCACTGAGAGCCCGACATCAATGCAGCCATaGAGCTTCTCTCTCTCTATATCGGTTTGGCTCTTG +
Preference number: 6 (lower is better)
Translates to: TDITESPTSMQP*SFSLSISVWLL
Trigger: CAAGAGCCAAACCGATATAGAGAGAGAGAAGCTGCATGGCTGCATTGATGTCGGGCTCTCAGTGATGTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313367.7
ENST00000396429.5
ENST00000396431.5
ENST00000409069.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
ENST00000415162.5
CDS CCA 72 bp TCAAAATGCCATCAGATGACAAGGGAGCCGAGAGTATaGAAGTCCCCAGTGGCAGGTGGTTTAGCTCTTATC +
Preference number: 6 (lower is better)
Translates to: SKCHQMTREPRV*KSPVAGGLALI
Trigger: GATAAGAGCTAAACCACCTGCCACTGGGGACTTCCATACTCTCGGCTCCCTTGTCATCTGATGGCATTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000313367.7
ENST00000396429.5
ENST00000396431.5
ENST00000409069.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
ENST00000415162.5
ENST00000415952.1
ENST00000441059.5
CDS CAA 90 bp ACACACCAAGGTTCTTCTCATCACTCATCATGGACAGCAAGTCACTaGGCCTCGAGACAATCAAAATGCCATCAGATGACAAGGGAGCCG +
Preference number: 6 (lower is better)
Translates to: THQGSSHHSSWTASH*ASRQSKCHQMTREP
Trigger: CGGCTCCCTTGTCATCTGATGGCATTTTGATTGTCTCGAGGCCAAGTGACTTGCTGTCCATGATGAGTGATGAGAAGAACCTTGGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000313367.7
ENST00000396429.5
ENST00000396431.5
ENST00000409069.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
ENST00000415162.5
ENST00000415952.1
ENST00000441059.5
CDS TCA 72 bp CTTGCTTCCAGCTCGGTAGTAGCTAGATGCATACGCTaGTATGGCAAAGGCTGCCACATATACCATCCTTTC +
Preference number: 6 (lower is better)
Translates to: LASSSVVARCIR*YGKGCHIYHPF
Trigger: GAAAGGATGGTATATGTGGCAGCCTTTGCCATATCAGCGTATGCATCTAGCTACTACCGAGCTGGAAGCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313367.7
ENST00000396429.5
ENST00000396431.5
ENST00000409069.5
CDS GCA 72 bp CCTGTCGACTTCCTTGCTTGGAAGAGCAGCTACTTGTaGTCCTTGAAGGTGATACCAATTTTTGGGACACAC +
Preference number: 6 (lower is better)
Translates to: PVDFLAWKSSYL*SLKVIPIFGTH
Trigger: GTGTGTCCCAAAAATTGGTATCACCTTCAAGGAGCACAAGTAGCTGCTCTTCCAAGCAAGGAAGTCGACAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000313367.7
ENST00000396429.5
ENST00000396431.5
ENST00000409069.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
ENST00000415162.5
ENST00000415952.1
ENST00000441059.5
CDS CAA 90 bp TGTCCTGTCGACTTCCTTGCTTGGAAGAGCAGCTACTTGTGCTCCTaGAAGGTGATACCAATTTTTGGGACACACCAAGGTTCTTCTCAT +
Preference number: 6 (lower is better)
Translates to: CPVDFLAWKSSYLCS*KVIPIFGTHQGSSH
Trigger: ATGAGAAGAACCTTGGTGTGTCCCAAAAATTGGTATCACCTTCAAGGAGCACAAGTAGCTGCTCTTCCAAGCAAGGAAGTCGACAGGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000313367.7
ENST00000396429.5
ENST00000396431.5
ENST00000409069.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
ENST00000415162.5
ENST00000415952.1
ENST00000441059.5
CDS CAA 72 bp GACTTCCTTGCTTGGAAGAGCAGCTACTTGTGCTCCTaGAAGGTGATACCAATTTTTGGGACACACCAAGGT +
Preference number: 6 (lower is better)
Translates to: DFLAWKSSYLCS*KVIPIFGTHQG
Trigger: ACCTTGGTGTGTCCCAAAAATTGGTATCACCTTCAAGGAGCACAAGTAGCTGCTCTTCCAAGCAAGGAAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000313367.7
ENST00000396429.5
ENST00000396431.5
ENST00000409069.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
ENST00000415162.5
ENST00000415952.1
ENST00000441059.5
CDS GCA 72 bp ACTTCTTTACAGACATCACTGAGAGCCCGACATCAATaGAGCCATGCAGCTTCTCTCTCTCTATATCGGTTT +
Preference number: 6 (lower is better)
Translates to: TSLQTSLRARHQ*SHAASLSLYRF
Trigger: AAACCGATATAGAGAGAGAGAAGCTGCATGGCTGCATTGATGTCGGGCTCTCAGTGATGTCTGTAAAGAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313367.7
ENST00000396429.5
ENST00000396431.5
ENST00000409069.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
ENST00000415162.5
CDS CAA 72 bp GGTTCTTCTCATCACTCATCATGGACAGCAAGTCACTaGGCCTCGAGACAATCAAAATGCCATCAGATGACA +
Preference number: 6 (lower is better)
Translates to: GSSHHSSWTASH*ASRQSKCHQMT
Trigger: TGTCATCTGATGGCATTTTGATTGTCTCGAGGCCAAGTGACTTGCTGTCCATGATGAGTGATGAGAAGAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000313367.7
ENST00000396429.5
ENST00000396431.5
ENST00000409069.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
ENST00000415162.5
ENST00000415952.1
ENST00000441059.5
CDS CAA 72 bp TTCTCTTCTCCAAAATCTAGTGTTGACAAATTAGGATaGGAGGAGTGTAGTCTTACTGGGCCAGAAAAAGGT +
Preference number: 6 (lower is better)
Translates to: FSSPKSSVDKLG*EECSLTGPEKG
Trigger: ACCTTTTTCTGGCCCAGTAAGACTACACTCCTCCAATCCTAATTTGTCAACACTAGATTTTGGAGAAGAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000313367.7
ENST00000396429.5
ENST00000396431.5
ENST00000409069.5
ENST00000409452.5
ENST00000409555.5
ENST00000409759.5
ENST00000409863.5
CDS CCA 72 bp TGCTCCAGTATTTTGCCTAGGATTCAAATGAGTTGTTaGCTTAGTCCTTTAGCATCAGCTTATTACAGATAT +
Preference number: 6 (lower is better)
Translates to: CSSILPRIQMSC*LSPLASAYYRY
Trigger: ATATCTGTAATAAGCTGATGCTAAAGGACTAAGCCAACAACTCATTTGAATCCTAGGCAAAATACTGGAGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459987.1