RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OSBPL1A (Homo sapiens)

Ensembl gene IDs: ENSG00000141447

Ensembl transcript IDs: ENST00000319481.8, ENST00000357041.8, ENST00000399441.4, ENST00000399443.7, ENST00000578013.1, ENST00000578055.5, ENST00000578091.5, ENST00000579764.5, ENST00000579851.5, ENST00000581043.5, ENST00000581343.1, ENST00000582350.5, ENST00000582618.1, ENST00000582645.5, ENST00000584119.1, ENST00000585247.5

Found 415 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGCTGCTCATCCCCAACAGGGACAACTTTGAAGCATCATCTCCTCTaGAAAGCTTCGCACACAGCAGAAAGGCTGAGGCATCGCTTGAGC +
Preference number: 1 (lower is better)
Translates to: GCSSPTGTTLKHHLL*KASHTAERLRHRLS
Trigger: GCTCAAGCGATGCCTCAGCCTTTCTGCTGTGTGCGAAGCTTTGCAGAGGAGATGATGCTTCAAAGTTGTCCCTGTTGGGGATGAGCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399441.4
3UTR TCA 90 bp CCAGTGTATAAAGGCCTGGCTGCTCATCCCCAACAGGGACAACTTTaGAGCATCATCTCCTCTGCAAAGCTTCGCACACAGCAGAAAGGC +
Preference number: 1 (lower is better)
Translates to: PVYKGLAAHPQQGQL*SIISSAKLRTQQKG
Trigger: GCCTTTCTGCTGTGTGCGAAGCTTTGCAGAGGAGATGATGCTTCAAAGTTGTCCCTGTTGGGGATGAGCAGCCAGGCCTTTATACACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399441.4
3UTR TCA 90 bp ATGCTGGCGGGTGGAGAGCCTTTCACCAGAGACTGCTCTAATTCATaGTGTTCAGTGGCCAGCGTCTCCAGTGCTTCTGACAAGATTTTG +
Preference number: 1 (lower is better)
Translates to: MLAGGEPFTRDCSNS*CSVASVSSASDKIL
Trigger: CAAAATCTTGTCAGAAGCACTGGAGACGCTGGCCACTGAACATCATGAATTAGAGCAGTCTCTGGTGAAAGGCTCTCCACCCGCCAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584119.1
3UTR CCA 90 bp CTGCATCTTGCACTTCCCATAACAGAAGGGAGCACAGTGCCTGGTTaGCTTCAACAGGTTTTGGGGCAGCTTATTCCACACCTAAAGATA +
Preference number: 1 (lower is better)
Translates to: LHLALPITEGSTVPG*LQQVLGQLIPHLKI
Trigger: TATCTTTAGGTGTGGAATAAGCTGCCCCAAAACCTGTTGAAGCCAACCAGGCACTGTGCTCCCTTCTGTTATGGGAAGTGCAAGATGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399441.4
3UTR CCA 90 bp ATTACTGCATCTTGCACTTCCCATAACAGAAGGGAGCACAGTGCCTaGTTGGCTTCAACAGGTTTTGGGGCAGCTTATTCCACACCTAAA +
Preference number: 1 (lower is better)
Translates to: ITASCTSHNRREHSA*LASTGFGAAYSTPK
Trigger: TTTAGGTGTGGAATAAGCTGCCCCAAAACCTGTTGAAGCCAACCAGGCACTGTGCTCCCTTCTGTTATGGGAAGTGCAAGATGCAGTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399441.4
3UTR GCA 90 bp CCACAGTCTTTTTCTTCGGACATTCTGTGTTTTCTACTGCCCAAATaGTCTCCTTCCTCTTCAAAGGAGCGTGCTGTCACTGCTTCCAAT +
Preference number: 1 (lower is better)
Translates to: PQSFSSDILCFLLPK*SPSSSKERAVTASN
Trigger: ATTGGAAGCAGTGACAGCACGCTCCTTTGAAGAGGAAGGAGAGCATTTGGGCAGTAGAAAACACAGAATGTCCGAAGAAAAAGACTGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584119.1
3UTR CAA 90 bp AGCAGAAAGGCTGAGGCATCGCTTGAGCCGGCAGCACTACTTGACTaGTCCACTCCTGTCCACTTCTTCCCCACCCTCGTGCACAGGTGT +
Preference number: 2 (lower is better)
Translates to: SRKAEASLEPAALLD*STPVHFFPTLVHRC
Trigger: ACACCTGTGCACGAGGGTGGGGAAGAAGTGGACAGGAGTGGACAAGTCAAGTAGTGCTGCCGGCTCAAGCGATGCCTCAGCCTTTCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399441.4
3UTR CAA 90 bp CACACAGCAGAAAGGCTGAGGCATCGCTTGAGCCGGCAGCACTACTaGACTTGTCCACTCCTGTCCACTTCTTCCCCACCCTCGTGCACA +
Preference number: 2 (lower is better)
Translates to: HTAERLRHRLSRQHY*TCPLLSTSSPPSCT
Trigger: TGTGCACGAGGGTGGGGAAGAAGTGGACAGGAGTGGACAAGTCAAGTAGTGCTGCCGGCTCAAGCGATGCCTCAGCCTTTCTGCTGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399441.4
3UTR-3UTR TCA 90 bp TGCATTTGCGTGTGGTGGGCCTGGGTGACTGCACCTGTAAAGATAAGCTATCACGCCGGCAGCACTACTTaGCTTGTCCACTCCTGTCCA +
Preference number: 2 (lower is better)
Translates to: CICVWWAWVTAPVKISYHAGSTT*LVHSCP
Trigger: TGGACAGGAGTGGACAAGTCAAGTAGTGCTGCCGGC...GTGATAGCTTATCTTTACAGGTGCAGTCACCCAGGCCCACCACACGCAAATGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399441.4
3UTR-3UTR GCA 90 bp TGCATTTGCGTGTGGTGGGCCTGGGTGACTGCACCTGTAAAGATAAGCTATCACGAACATTGGGGTCCTTaGATCCAAGGACCAGCAGGC +
Preference number: 2 (lower is better)
Translates to: CICVWWAWVTAPVKISYHEHWGP*IQGPAG
Trigger: GCCTGCTGGTCCTTGGATGCAAGGACCCCAATGTTC...GTGATAGCTTATCTTTACAGGTGCAGTCACCCAGGCCCACCACACGCAAATGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399441.4
3UTR-3UTR CCA 90 bp CCACCTTATTTAGGAACCAAAAGGGGGAGGCAGGTTTGCATGACCCAGTTCTCAAGCACAGTGCCTGGTTaGCTTCAACAGGTTTTGGGG +
Preference number: 2 (lower is better)
Translates to: PPYLGTKRGRQVCMTQFSSTVPG*LQQVLG
Trigger: CCCCAAAACCTGTTGAAGCCAACCAGGCACTGTGCT...TGAGAACTGGGTCATGCAAACCTGCCTCCCCCTTTTGGTTCCTAAATAAGGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000399441.4
3UTR-3UTR TCA 90 bp GCTAACAGAACCAGGAGAAGAGGCTTCTTCTCCACGAGGCTAGGATGTTCAAAGCACTGGTCTGGGCAATaGCAAGACACTTCCTCAGAA +
Preference number: 2 (lower is better)
Translates to: ANRTRRRGFFSTRLGCSKHWSGQ*QDTSSE
Trigger: TTCTGAGGAAGTGTCTTGTCATTGCCCAGACCAGTG...CTTTGAACATCCTAGCCTCGTGGAGAAGAAGCCTCTTCTCCTGGTTCTGTTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399441.4
3UTR-3UTR GCA 90 bp ATCACGGACTGGCAGCTACCTAGGCCCCTGGGAGCAGTATCTCAGTCTGGGGTTAGTACACAGGTACTTTaGAAACTTGAAATGCACAAG +
Preference number: 2 (lower is better)
Translates to: ITDWQLPRPLGAVSQSGVSTQVL*KLEMHK
Trigger: CTTGTGCATTTCAAGTTTGCAAAGTACCTGTGTACT...AACCCCAGACTGAGATACTGCTCCCAGGGGCCTAGGTAGCTGCCAGTCCGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
3UTR-3UTR CCA 90 bp GCTAACAGAACCAGGAGAAGAGGCTTCTTCTCCACGAGGCTAGGATGTTCAAAGAGGGAGCACAGTGCCTaGTTGGCTTCAACAGGTTTT +
Preference number: 2 (lower is better)
Translates to: ANRTRRRGFFSTRLGCSKREHSA*LASTGF
Trigger: AAAACCTGTTGAAGCCAACCAGGCACTGTGCTCCCT...CTTTGAACATCCTAGCCTCGTGGAGAAGAAGCCTCTTCTCCTGGTTCTGTTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399441.4
3UTR-3UTR CCA 90 bp CTCTTCAAAGGAGCGTGCTGTCACTGCTTCCAATCTACTCAGGGACCTTTCGGAATTCATGATGTTCAGTaGCCAGCGTCTCCAGTGCTT +
Preference number: 2 (lower is better)
Translates to: LFKGACCHCFQSTQGPFGIHDVQ*PASPVL
Trigger: AAGCACTGGAGACGCTGGCCACTGAACATCATGAAT...TCCGAAAGGTCCCTGAGTAGATTGGAAGCAGTGACAGCACGCTCCTTTGAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584119.1
3UTR CAA 90 bp ACTGCATCTTGCACTTCCCATAACAGAAGGGAGCACAGTGCCTGGTaGGCTTCAACAGGTTTTGGGGCAGCTTATTCCACACCTAAAGAT +
Preference number: 2 (lower is better)
Translates to: TASCTSHNRREHSAW*ASTGFGAAYSTPKD
Trigger: ATCTTTAGGTGTGGAATAAGCTGCCCCAAAACCTGTTGAAGCCAACCAGGCACTGTGCTCCCTTCTGTTATGGGAAGTGCAAGATGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399441.4
3UTR-3UTR TCA 90 bp TTGCGTGTGGTGGGCCTGGGTGACTGCACCTGTAAAGATAAGCTATCACTTTGCACCCAGTTCTCAGCTTaGTTTTTCCCTTTGGCAAAA +
Preference number: 2 (lower is better)
Translates to: LRVVGLGDCTCKDKLSLCTQFSA*FFPLAK
Trigger: TTTTGCCAAAGGGAAAAATCAAGCTGAGAACTGGGT...GCAAAGTGATAGCTTATCTTTACAGGTGCAGTCACCCAGGCCCACCACACGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399441.4
3UTR-3UTR GCA 90 bp AACTTCAAGACAGCAATTAAAATCACGGACTGGCAGCTACCTAGGCCCCTGGGATATCGCCTTATACCCTaGTTTTGTTGGGTGAAATGC +
Preference number: 2 (lower is better)
Translates to: NFKTAIKITDWQLPRPLGYRLIP*FCWVKC
Trigger: GCATTTCACCCAACAAAAGCAGGGTATAAGGCGATA...TCCCAGGGGCCTAGGTAGCTGCCAGTCCGTGATTTTAATTGCTGTCTTGAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
3UTR-3UTR GCA 90 bp TGTTGGCATGACTGTGCTTTCTCTAATGATTTCTTCAGGTCTGCAGCAGAAACCATGGGCCCGGTAAGCTaGACAATGCAAGGGTGTATT +
Preference number: 2 (lower is better)
Translates to: CWHDCAFSNDFFRSAAETMGPVS*TMQGCI
Trigger: AATACACCCTTGCATTGTGCAGCTTACCGGGCCCAT...GGTTTCTGCTGCAGACCTGAAGAAATCATTAGAGAAAGCACAGTCATGCCAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578091.5
ENST00000579851.5
3UTR-3UTR GCA 90 bp TACCGTGCATACTGCTTGAGTCAGGTGTTTGCATCCCTGGCGATAAATATTATGATGGGCCCGGTAAGCTaGACAATGCAAGGGTGTATT +
Preference number: 2 (lower is better)
Translates to: YRAYCLSQVFASLAINIMMGPVS*TMQGCI
Trigger: AATACACCCTTGCATTGTGCAGCTTACCGGGCCCAT...CATAATATTTATCGCCAGGGATGCAAACACCTGACTCAAGCAGTATGCACGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578091.5
ENST00000579851.5
3UTR-3UTR GCA 90 bp TTCTTCGGACATTCTGTGTTTTCTACTGCCCAAATGCTCTCCTTCCTCTTCAAAGGAGCGTGCTGTCACTaGTTCCAATCTACTCAGGGA +
Preference number: 2 (lower is better)
Translates to: FFGHSVFSTAQMLSFLFKGACCH*FQSTQG
Trigger: TCCCTGAGTAGATTGGAAGCAGTGACAGCACGCTCC...TTTGAAGAGGAAGGAGAGCATTTGGGCAGTAGAAAACACAGAATGTCCGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584119.1
3UTR-3UTR CCA 90 bp AACTTCAAGACAGCAATTAAAATCACGGACTGGCAGCTACCTAGGCCCCTGGGAAGTGGCATTTGCCACTaGAAGTGGAAGCATTTAACA +
Preference number: 2 (lower is better)
Translates to: NFKTAIKITDWQLPRPLGSGICH*KWKHLT
Trigger: TGTTAAATGCTTCCACTTCCAGTGGCAAATGCCACT...TCCCAGGGGCCTAGGTAGCTGCCAGTCCGTGATTTTAATTGCTGTCTTGAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
3UTR-3UTR CCA 90 bp CTGGGAACAGTAGTGAGTGCTGTAAGCAGAATGTTCTTCTATTGCTTCCAGCCATTCATTTCAGCACCCTaGGCAAGGTCAAGAGGTTTC +
Preference number: 2 (lower is better)
Translates to: LGTVVSAVSRMFFYCFQPFISAP*ARSRGF
Trigger: GAAACCTCTTGACCTTGCCCAGGGTGCTGAAATGAA...TGGCTGGAAGCAATAGAAGAACATTCTGCTTACAGCACTCACTACTGTTCCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578091.5
ENST00000579851.5
3UTR-3UTR TCA 90 bp GAAAGTTGGAAATTTCCCTATCTAGTCGCTGTTGGCATGACTGTGCTTTCTCTAGGAACCCGGAAGCCATaGATGGTGTCATCAAAGCAT +
Preference number: 2 (lower is better)
Translates to: ESWKFPYLVAVGMTVLSLGTRKP*MVSSKH
Trigger: ATGCTTTGATGACACCATTCATGGCTTCCGGGTTCC...TAGAGAAAGCACAGTCATGCCAACAGCGACTAGATAGGGAAATTTCCAACTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578091.5
ENST00000579851.5
3UTR-3UTR TCA 90 bp TGTTGGCATGACTGTGCTTTCTCTAATGATTTCTTCAGGTCTGCAGCAGAAACCTCCTCTCTTGACTGCTaGAGGCTATTCTTAGGAACC +
Preference number: 2 (lower is better)
Translates to: CWHDCAFSNDFFRSAAETSSLDC*RLFLGT
Trigger: GGTTCCTAAGAATAGCCTTCAGCAGTCAAGAGAGGA...GGTTTCTGCTGCAGACCTGAAGAAATCATTAGAGAAAGCACAGTCATGCCAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578091.5
ENST00000579851.5
3UTR-3UTR TCA 90 bp TTTTTCTTCGGACATTCTGTGTTTTCTACTGCCCAAATGCTCTCCTTCCTCTTCGACTGCTCTAATTCATaGTGTTCAGTGGCCAGCGTC +
Preference number: 2 (lower is better)
Translates to: FFFGHSVFSTAQMLSFLFDCSNS*CSVASV
Trigger: GACGCTGGCCACTGAACATCATGAATTAGAGCAGTC...GAAGAGGAAGGAGAGCATTTGGGCAGTAGAAAACACAGAATGTCCGAAGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584119.1
3UTR-3UTR CCA 90 bp TTGCGTGTGGTGGGCCTGGGTGACTGCACCTGTAAAGATAAGCTATCACTTTGCAATTTTTATGGTAAATaGACAAGGGCAGCAACTCCA +
Preference number: 2 (lower is better)
Translates to: LRVVGLGDCTCKDKLSLCNFYGK*TRAATP
Trigger: TGGAGTTGCTGCCCTTGTCCATTTACCATAAAAATT...GCAAAGTGATAGCTTATCTTTACAGGTGCAGTCACCCAGGCCCACCACACGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399441.4
3UTR-3UTR CCA 90 bp TCCAGTGGGTGGGAGGTAAAACTTAGGAAGAATTCAGGAGCTTTTCCATGTCAGAGAAGTTCACTGGTCTaGGCAATGACAAGACACTTC +
Preference number: 2 (lower is better)
Translates to: SSGWEVKLRKNSGAFPCQRSSLV*AMTRHF
Trigger: GAAGTGTCTTGTCATTGCCCAGACCAGTGAACTTCT...CTGACATGGAAAAGCTCCTGAATTCTTCCTAAGTTTTACCTCCCACCCACTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399441.4
3UTR-3UTR CCA 90 bp TGTTGGCATGACTGTGCTTTCTCTAATGATTTCTTCAGGTCTGCAGCAGAAACCTTCATTTCAGCACCCTaGGCAAGGTCAAGAGGTTTC +
Preference number: 2 (lower is better)
Translates to: CWHDCAFSNDFFRSAAETFISAP*ARSRGF
Trigger: GAAACCTCTTGACCTTGCCCAGGGTGCTGAAATGAA...GGTTTCTGCTGCAGACCTGAAGAAATCATTAGAGAAAGCACAGTCATGCCAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578091.5
ENST00000579851.5
3UTR-3UTR TCA 90 bp AGATTAAGGCAATCAGTCAAAGCTACACAAGTTTCTCTAGAAGCTTCTGAGACAACCGTGCATACTGCTTaGGTCAGGTGTTTGCATCCC +
Preference number: 2 (lower is better)
Translates to: RLRQSVKATQVSLEASETTVHTA*VRCLHP
Trigger: GGGATGCAAACACCTGACTCAAGCAGTATGCACGGT...TGTCTCAGAAGCTTCTAGAGAAACTTGTGTAGCTTTGACTGATTGCCTTAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578091.5
ENST00000579851.5
3UTR-3UTR GCA 90 bp TGTTGGCATGACTGTGCTTTCTCTAATGATTTCTTCAGGTCTGCAGCAGAAACCCAGTGGATTTTACCGTaGATACTGCTTGAGTCAGGT +
Preference number: 2 (lower is better)
Translates to: CWHDCAFSNDFFRSAAETQWILP*ILLESG
Trigger: ACCTGACTCAAGCAGTATGCACGGTAAAATCCACTG...GGTTTCTGCTGCAGACCTGAAGAAATCATTAGAGAAAGCACAGTCATGCCAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578091.5
ENST00000579851.5
3UTR-3UTR CCA 90 bp TGTTGGCATGACTGTGCTTTCTCTAATGATTTCTTCAGGTCTGCAGCAGAAACCAGAGGCAGCTATCAGTaGATTTTACCGTGCATACTG +
Preference number: 2 (lower is better)
Translates to: CWHDCAFSNDFFRSAAETRGSYQ*ILPCIL
Trigger: CAGTATGCACGGTAAAATCCACTGATAGCTGCCTCT...GGTTTCTGCTGCAGACCTGAAGAAATCATTAGAGAAAGCACAGTCATGCCAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578091.5
ENST00000579851.5
3UTR-3UTR GCA 90 bp TTCTCTAATGATTTCTTCAGGTCTGCAGCAGAAACCGTATCTTCCTCCTCCTCATTTTACCGTGCATACTaGTTGAGTCAGGTGTTTGCA +
Preference number: 2 (lower is better)
Translates to: FSNDFFRSAAETVSSSSSFYRAY*LSQVFA
Trigger: TGCAAACACCTGACTCAAGCAGTATGCACGGTAAAA...TGAGGAGGAGGAAGATACGGTTTCTGCTGCAGACCTGAAGAAATCATTAGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578091.5
ENST00000579851.5
3UTR-3UTR GCA 90 bp TTCTCTAATGATTTCTTCAGGTCTGCAGCAGAAACCGTATCTTCCTCCTCCTCAGGGAACAGTAGTGAGTaGTGTAAGCAGAATGTTCTT +
Preference number: 2 (lower is better)
Translates to: FSNDFFRSAAETVSSSSSGNSSE*CKQNVL
Trigger: AAGAACATTCTGCTTACAGCACTCACTACTGTTCCC...TGAGGAGGAGGAAGATACGGTTTCTGCTGCAGACCTGAAGAAATCATTAGAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578091.5
ENST00000579851.5
3UTR-3UTR CCA 90 bp TTGTTAACTTCAAGACAGCAATTAAAATCACGGACTGGCAGCTACCTAGGCCCCTCTCAGTCTGGGGTTTaGGTGGATAAATACTATAAG +
Preference number: 2 (lower is better)
Translates to: LLTSRQQLKSRTGSYLGPSQSGV*VDKYYK
Trigger: CTTATAGTATTTATCCACCCAAACCCCAGACTGAGA...GGGGCCTAGGTAGCTGCCAGTCCGTGATTTTAATTGCTGTCTTGAAGTTAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
3UTR-3UTR CCA 90 bp GAGGCAGGTTTGCATGACCCAGTTCTCAGCTTGATTTTTCCCTTTGGCAAAATGAACTCAGGTGTGTCCTaGTATTCTCTTGTCCAATTT +
Preference number: 2 (lower is better)
Translates to: EAGLHDPVLSLIFPFGKMNSGVS*YSLVQF
Trigger: AAATTGGACAAGAGAATACCAGGACACACCTGAGTT...CATTTTGCCAAAGGGAAAAATCAAGCTGAGAACTGGGTCATGCAAACCTGCCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399441.4
3UTR-3UTR TCA 90 bp TTGTTAACTTCAAGACAGCAATTAAAATCACGGACTGGCAGCTACCTAGGCCCCAGTTTGATACTTACATaGGTGCAACTTACTTTCCCT +
Preference number: 2 (lower is better)
Translates to: LLTSRQQLKSRTGSYLGPSLILT*VQLTFP
Trigger: AGGGAAAGTAAGTTGCACTCATGTAAGTATCAAACT...GGGGCCTAGGTAGCTGCCAGTCCGTGATTTTAATTGCTGTCTTGAAGTTAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
3UTR-3UTR TCA 90 bp TTCTCTAATGATTTCTTCAGGTCTGCAGCAGAAACCGTATCTTCCTCCTCCTCAGGTGTATTTCCTAACTaGTCCGAACAGTTAACATCA +
Preference number: 2 (lower is better)
Translates to: FSNDFFRSAAETVSSSSSGVFPN*SEQLTS
Trigger: TGATGTTAACTGTTCGGATCAGTTAGGAAATACACC...TGAGGAGGAGGAAGATACGGTTTCTGCTGCAGACCTGAAGAAATCATTAGAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578091.5
ENST00000579851.5
3UTR-3UTR CCA 90 bp ACACTTGTTAACTTCAAGACAGCAATTAAAATCACGGACTGGCAGCTACCTAGGAGTGGCATTTGCCACTaGAAGTGGAAGCATTTAACA +
Preference number: 2 (lower is better)
Translates to: TLVNFKTAIKITDWQLPRSGICH*KWKHLT
Trigger: TGTTAAATGCTTCCACTTCCAGTGGCAAATGCCACT...CCTAGGTAGCTGCCAGTCCGTGATTTTAATTGCTGTCTTGAAGTTAACAAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
3UTR-3UTR GCA 90 bp GAAAGTTGGAAATTTCCCTATCTAGTCGCTGTTGGCATGACTGTGCTTTCTCTAATGAGTAACTTCTTTTaGTGTCTGTCCACTCCCATT +
Preference number: 2 (lower is better)
Translates to: ESWKFPYLVAVGMTVLSLMSNFF*CLSTPI
Trigger: AATGGGAGTGGACAGACAGCAAAAGAAGTTACTCAT...TAGAGAAAGCACAGTCATGCCAACAGCGACTAGATAGGGAAATTTCCAACTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578091.5
ENST00000579851.5
3UTR-3UTR GCA 90 bp TTGGAAATTTCCCTATCTAGTCGCTGTTGGCATGACTGTGCTTTCTCTAATGATCATGAAAGGACTCCATaGTCTAACACTACCCAGAAT +
Preference number: 2 (lower is better)
Translates to: LEISLSSRCWHDCAFSNDHERTP*SNTTQN
Trigger: ATTCTGGGTAGTGTTAGAGCATGGAGTCCTTTCATG...ATCATTAGAGAAAGCACAGTCATGCCAACAGCGACTAGATAGGGAAATTTCCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578091.5
ENST00000579851.5
3UTR-3UTR GCA 90 bp TTGGAAATTTCCCTATCTAGTCGCTGTTGGCATGACTGTGCTTTCTCTAATGATCTTGAGTCAGGTGTTTaGATCCCTGGCGATAAATAT +
Preference number: 2 (lower is better)
Translates to: LEISLSSRCWHDCAFSNDLESGV*IPGDKY
Trigger: ATATTTATCGCCAGGGATGCAAACACCTGACTCAAG...ATCATTAGAGAAAGCACAGTCATGCCAACAGCGACTAGATAGGGAAATTTCCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578091.5
ENST00000579851.5
3UTR CAA 90 bp AGCATTTCTTTAGCCATGTCACACTCCTTAATCATTTTGAGAAAGTaGGAAATTTCCCTATCTAGTCGCTGTTGGCATGACTGTGCTTTC +
Preference number: 2 (lower is better)
Translates to: SISLAMSHSLIILRK*EISLSSRCWHDCAF
Trigger: GAAAGCACAGTCATGCCAACAGCGACTAGATAGGGAAATTTCCAACTTTCTCAAAATGATTAAGGAGTGTGACATGGCTAAAGAAATGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578091.5
ENST00000579851.5
3UTR CAA 90 bp AATGATGGAAGCATTTCTTTAGCCATGTCACACTCCTTAATCATTTaGAGAAAGTTGGAAATTTCCCTATCTAGTCGCTGTTGGCATGAC +
Preference number: 2 (lower is better)
Translates to: NDGSISLAMSHSLII*RKLEISLSSRCWHD
Trigger: GTCATGCCAACAGCGACTAGATAGGGAAATTTCCAACTTTCTCAAAATGATTAAGGAGTGTGACATGGCTAAAGAAATGCTTCCATCATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578091.5
ENST00000579851.5
3UTR-3UTR CCA 90 bp ACACTTGTTAACTTCAAGACAGCAATTAAAATCACGGACTGGCAGCTACCTAGGAGTCTGGGGTTTGGGTaGATAAATACTATAAGATTT +
Preference number: 2 (lower is better)
Translates to: TLVNFKTAIKITDWQLPRSLGFG*INTIRF
Trigger: AAATCTTATAGTATTTATCCACCCAAACCCCAGACT...CCTAGGTAGCTGCCAGTCCGTGATTTTAATTGCTGTCTTGAAGTTAACAAGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
3UTR-3UTR GCA 90 bp AGGAGGAGAGTTCTAAATATGTCAAAGGTTACATCTAAAACATTCAAGCATGACTATCGCCTTATACCCTaGTTTTGTTGGGTGAAATGC +
Preference number: 2 (lower is better)
Translates to: RRRVLNMSKVTSKTFKHDYRLIP*FCWVKC
Trigger: GCATTTCACCCAACAAAAGCAGGGTATAAGGCGATA...GTCATGCTTGAATGTTTTAGATGTAACCTTTGACATATTTAGAACTCTCCTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
3UTR GCA 72 bp ACTTGTCCACTCCTGTCCACTTCTTCCCCACCCTCGTaGACAGGTGTGATGCCACGAGCACTCCATAAACCT +
Preference number: 3 (lower is better)
Translates to: TCPLLSTSSPPS*TGVMPRALHKP
Trigger: AGGTTTATGGAGTGCTCGTGGCATCACACCTGTGCACGAGGGTGGGGAAGAAGTGGACAGGAGTGGACAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399441.4
3UTR TCA 72 bp AAAGGCCTGGCTGCTCATCCCCAACAGGGACAACTTTaGAGCATCATCTCCTCTGCAAAGCTTCGCACACAG +
Preference number: 3 (lower is better)
Translates to: KGLAAHPQQGQL*SIISSAKLRTQ
Trigger: CTGTGTGCGAAGCTTTGCAGAGGAGATGATGCTTCAAAGTTGTCCCTGTTGGGGATGAGCAGCCAGGCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399441.4
3UTR TCA 72 bp GGTGGAGAGCCTTTCACCAGAGACTGCTCTAATTCATaGTGTTCAGTGGCCAGCGTCTCCAGTGCTTCTGAC +
Preference number: 3 (lower is better)
Translates to: GGEPFTRDCSNS*CSVASVSSASD
Trigger: GTCAGAAGCACTGGAGACGCTGGCCACTGAACATCATGAATTAGAGCAGTCTCTGGTGAAAGGCTCTCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584119.1
3UTR CCA 72 bp GCACTTCCCATAACAGAAGGGAGCACAGTGCCTGGTTaGCTTCAACAGGTTTTGGGGCAGCTTATTCCACAC +
Preference number: 3 (lower is better)
Translates to: ALPITEGSTVPG*LQQVLGQLIPH
Trigger: GTGTGGAATAAGCTGCCCCAAAACCTGTTGAAGCCAACCAGGCACTGTGCTCCCTTCTGTTATGGGAAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399441.4
3UTR-3UTR CAA 90 bp GCTAACAGAACCAGGAGAAGAGGCTTCTTCTCCACGAGGCTAGGATGTTCAAAGGAGCACAGTGCCTGGTaGGCTTCAACAGGTTTTGGG +
Preference number: 3 (lower is better)
Translates to: ANRTRRRGFFSTRLGCSKEHSAW*ASTGFG
Trigger: CCCAAAACCTGTTGAAGCCAACCAGGCACTGTGCTC...CTTTGAACATCCTAGCCTCGTGGAGAAGAAGCCTCTTCTCCTGGTTCTGTTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399441.4
3UTR GCA 72 bp ACTGCCCAAATGCTCTCCTTCCTCTTCAAAGGAGCGTaGTGTCACTGCTTCCAATCTACTCAGGGACCTTTC +
Preference number: 3 (lower is better)
Translates to: TAQMLSFLFKGA*CHCFQSTQGPF
Trigger: GAAAGGTCCCTGAGTAGATTGGAAGCAGTGACAGCACGCTCCTTTGAAGAGGAAGGAGAGCATTTGGGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584119.1
3UTR-3UTR CAA 90 bp GATATGCATTTGCGTGTGGTGGGCCTGGGTGACTGCACCTGTAAAGATAAGCTACCAACAGGGACAACTTaGAAGCATCATCTCCTCTGC +
Preference number: 3 (lower is better)
Translates to: DMHLRVVGLGDCTCKDKLPTGTT*KHHLLC
Trigger: GCAGAGGAGATGATGCTTCAAAGTTGTCCCTGTTGG...TAGCTTATCTTTACAGGTGCAGTCACCCAGGCCCACCACACGCAAATGCATATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399441.4
3UTR-3UTR CAA 90 bp AGCGTGCTGTCACTGCTTCCAATCTACTCAGGGACCTTTCGGACTCGGAATCTGCTCACCCCTTCTTGTTaGGTGAAGAGATTAAGGCAA +
Preference number: 3 (lower is better)
Translates to: SVLSLLPIYSGTFRTRNLLTPSC*VKRLRQ
Trigger: TTGCCTTAATCTCTTCACCAAACAAGAAGGGGTGAG...CAGATTCCGAGTCCGAAAGGTCCCTGAGTAGATTGGAAGCAGTGACAGCACGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584119.1
3UTR-3UTR CAA 90 bp TTCTCTAATGATTTCTTCAGGTCTGCAGCAGAAACCGTATCTTCCTCCTCCTCAGGAGGATTGGGCCTGTaGAGCAGAGCTGTGAGTTCT +
Preference number: 3 (lower is better)
Translates to: FSNDFFRSAAETVSSSSSGGLGL*SRAVSS
Trigger: AGAACTCACAGCTCTGCTCAACAGGCCCAATCCTCC...TGAGGAGGAGGAAGATACGGTTTCTGCTGCAGACCTGAAGAAATCATTAGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578091.5
ENST00000579851.5
3UTR-3UTR CAA 90 bp AGCGTGCTGTCACTGCTTCCAATCTACTCAGGGACCTTTCGGACTCGGAATCTGATTCCTCACCCCTTCTaGTTTGGTGAAGAGATTAAG +
Preference number: 3 (lower is better)
Translates to: SVLSLLPIYSGTFRTRNLIPHPF*FGEEIK
Trigger: CTTAATCTCTTCACCAAACAAGAAGGGGTGAGGAAT...CAGATTCCGAGTCCGAAAGGTCCCTGAGTAGATTGGAAGCAGTGACAGCACGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584119.1
3UTR CCA 72 bp CTTGTTAACTTCAAGACAGCAATTAAAATCACGGACTaGCAGCTACCTAGGCCCCTGGGAGCAGTATCTCAG +
Preference number: 3 (lower is better)
Translates to: LVNFKTAIKITD*QLPRPLGAVSQ
Trigger: CTGAGATACTGCTCCCAGGGGCCTAGGTAGCTGCCAGTCCGTGATTTTAATTGCTGTCTTGAAGTTAACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
3UTR-3UTR CAA 90 bp TATGAACTGCATCAGGCTGTTTCCTATACCATGAAAGGACTCCATGCTCTAACAGGAGGATTGGGCCTGTaGAGCAGAGCTGTGAGTTCT +
Preference number: 3 (lower is better)
Translates to: YELHQAVSYTMKGLHALTGGLGL*SRAVSS
Trigger: AGAACTCACAGCTCTGCTCAACAGGCCCAATCCTCC...TGTTAGAGCATGGAGTCCTTTCATGGTATAGGAAACAGCCTGATGCAGTTCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578091.5
ENST00000579851.5
3UTR-3UTR CAA 90 bp GAAAGTTGGAAATTTCCCTATCTAGTCGCTGTTGGCATGACTGTGCTTTCTCTACCAGCCAGTCCTCTCTaGACTGCTGAAGGCTATTCT +
Preference number: 3 (lower is better)
Translates to: ESWKFPYLVAVGMTVLSLPASPL*TAEGYS
Trigger: AGAATAGCCTTCAGCAGTCAAGAGAGGACTGGCTGG...TAGAGAAAGCACAGTCATGCCAACAGCGACTAGATAGGGAAATTTCCAACTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578091.5
ENST00000579851.5
3UTR GCA 72 bp TTAGATATGCATTTGCGTGTGGTGGGCCTGGGTGACTaGACCTGTAAAGATAAGCTATCACTTTGCATTGCT +
Preference number: 3 (lower is better)
Translates to: LDMHLRVVGLGD*TCKDKLSLCIA
Trigger: AGCAATGCAAAGTGATAGCTTATCTTTACAGGTGCAGTCACCCAGGCCCACCACACGCAAATGCATATCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399441.4
3UTR CCA 72 bp CTTTCACCAGAGACTGCTCTAATTCATGATGTTCAGTaGCCAGCGTCTCCAGTGCTTCTGACAAGATTTTGT +
Preference number: 3 (lower is better)
Translates to: LSPETALIHDVQ*PASPVLLTRFC
Trigger: ACAAAATCTTGTCAGAAGCACTGGAGACGCTGGCCACTGAACATCATGAATTAGAGCAGTCTCTGGTGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584119.1
3UTR GCA 72 bp GCATCAGGCTGTTTCCTATACCATGAAAGGACTCCATaGTCTAACACTACCCAGAATAATCTCCAGCCAAAA +
Preference number: 3 (lower is better)
Translates to: ASGCFLYHERTP*SNTTQNNLQPK
Trigger: TTTTGGCTGGAGATTATTCTGGGTAGTGTTAGAGCATGGAGTCCTTTCATGGTATAGGAAACAGCCTGATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578091.5
ENST00000579851.5
3UTR GCA 72 bp TGGATTTTACCGTGCATACTGCTTGAGTCAGGTGTTTaGATCCCTGGCGATAAATATTATGAACTGCATCAG +
Preference number: 3 (lower is better)
Translates to: WILPCILLESGV*IPGDKYYELHQ
Trigger: CTGATGCAGTTCATAATATTTATCGCCAGGGATGCAAACACCTGACTCAAGCAGTATGCACGGTAAAATCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578091.5
ENST00000579851.5
3UTR CCA 72 bp CGTAGGGAATCTGCATTCTACATAACACAGACAAAATaGGGCAGGGGAACAATTAGATATGCATTTGCGTGT +
Preference number: 3 (lower is better)
Translates to: RRESAFYITQTK*GRGTIRYAFAC
Trigger: ACACGCAAATGCATATCTAATTGTTCCCCTGCCCCATTTTGTCTGTGTTATGTAGAATGCAGATTCCCTACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399441.4
3UTR-3UTR CAA 90 bp TACCGTGCATACTGCTTGAGTCAGGTGTTTGCATCCCTGGCGATAAATATTATGTTCAAGCTTTCTTTGTaGAGTCCTTTCTACAGCTTC +
Preference number: 3 (lower is better)
Translates to: YRAYCLSQVFASLAINIMFKLSL*SPFYSF
Trigger: GAAGCTGTAGAAAGGACTCAACAAAGAAAGCTTGAA...CATAATATTTATCGCCAGGGATGCAAACACCTGACTCAAGCAGTATGCACGGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578091.5
ENST00000579851.5
3UTR-3UTR CAA 90 bp TGTTGGCATGACTGTGCTTTCTCTAATGATTTCTTCAGGTCTGCAGCAGAAACCTTCTTCAAGCTTTCTTaGTTGAGTCCTTTCTACAGC +
Preference number: 3 (lower is better)
Translates to: CWHDCAFSNDFFRSAAETFFKLS*LSPFYS
Trigger: GCTGTAGAAAGGACTCAACAAAGAAAGCTTGAAGAA...GGTTTCTGCTGCAGACCTGAAGAAATCATTAGAGAAAGCACAGTCATGCCAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578091.5
ENST00000579851.5
3UTR-3UTR CAA 90 bp TTCTCTAATGATTTCTTCAGGTCTGCAGCAGAAACCGTATCTTCCTCCTCCTCATTCTTCAAGCTTTCTTaGTTGAGTCCTTTCTACAGC +
Preference number: 3 (lower is better)
Translates to: FSNDFFRSAAETVSSSSSFFKLS*LSPFYS
Trigger: GCTGTAGAAAGGACTCAACAAAGAAAGCTTGAAGAA...TGAGGAGGAGGAAGATACGGTTTCTGCTGCAGACCTGAAGAAATCATTAGAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578091.5
ENST00000579851.5
3UTR-3UTR CAA 90 bp TATGAACTGCATCAGGCTGTTTCCTATACCATGAAAGGACTCCATGCTCTAACATTCAAGCTTTCTTTGTaGAGTCCTTTCTACAGCTTC +
Preference number: 3 (lower is better)
Translates to: YELHQAVSYTMKGLHALTFKLSL*SPFYSF
Trigger: GAAGCTGTAGAAAGGACTCAACAAAGAAAGCTTGAA...TGTTAGAGCATGGAGTCCTTTCATGGTATAGGAAACAGCCTGATGCAGTTCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578091.5
ENST00000579851.5
3UTR-3UTR CAA 90 bp AGGAGGAGAGTTCTAAATATGTCAAAGGTTACATCTAAAACATTCAAGCATGACTATACCCTGCTTTTGTaGGGTGAAATGCAGTTATCT +
Preference number: 3 (lower is better)
Translates to: RRRVLNMSKVTSKTFKHDYTLLL*GEMQLS
Trigger: AGATAACTGCATTTCACCCAACAAAAGCAGGGTATA...GTCATGCTTGAATGTTTTAGATGTAACCTTTGACATATTTAGAACTCTCCTCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR GCA 90 bp ATCACGGACTGGCAGCTACCTAGGCCCCTGGGAGCAGTATCTCAGTCTGGGGTTTGGGCTCTACGTGAGTaGCGCGCCGAGGCGCCTGCG +
Preference number: 4 (lower is better)
Translates to: ITDWQLPRPLGAVSQSGVWALRE*RAEAPA
Trigger: CGCAGGCGCCTCGGCGCGGCACTCACGTAGAGCCCA...AACCCCAGACTGAGATACTGCTCCCAGGGGCCTAGGTAGCTGCCAGTCCGTGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399443.7
CDS-3UTR CCA 90 bp TCCCCACCCTCGTGCACAGGTGTGATGCCACGAGCACTCCATAAACCTGCTGCCGTCACCAACTCTGGCTaGCACTCCCCGAGGACGCTC +
Preference number: 4 (lower is better)
Translates to: SPPSCTGVMPRALHKPAAVTNSG*HSPRTL
Trigger: GAGCGTCCTCGGGGAGTGCCAGCCAGAGTTGGTGAC...GGCAGCAGGTTTATGGAGTGCTCGTGGCATCACACCTGTGCACGAGGGTGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399441.4
CDS-3UTR CCA 90 bp TGCATTTGCGTGTGGTGGGCCTGGGTGACTGCACCTGTAAAGATAAGCTATCACGAGCTCCCGAGGCGGTaGCCACGACCCCAGGCTTCC +
Preference number: 4 (lower is better)
Translates to: CICVWWAWVTAPVKISYHELPRR*PRPQAS
Trigger: GGAAGCCTGGGGTCGTGGCCACCGCCTCGGGAGCTC...GTGATAGCTTATCTTTACAGGTGCAGTCACCCAGGCCCACCACACGCAAATGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399441.4
CDS-3UTR CCA 90 bp TTTCTACAGCTTTCGTCCTGTAAAGGCAGCTCGATGAAGCGGCGTGTCTCCCATGAGCTCCCGAGGCGGTaGCCACGACCCCAGGCTTCC +
Preference number: 4 (lower is better)
Translates to: FLQLSSCKGSSMKRRVSHELPRR*PRPQAS
Trigger: GGAAGCCTGGGGTCGTGGCCACCGCCTCGGGAGCTC...ATGGGAGACACGCCGCTTCATCGAGCTGCCTTTACAGGACGAAAGCTGTAGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582645.5
3UTR CAA 72 bp GCTGAGGCATCGCTTGAGCCGGCAGCACTACTTGACTaGTCCACTCCTGTCCACTTCTTCCCCACCCTCGTG +
Preference number: 4 (lower is better)
Translates to: AEASLEPAALLD*STPVHFFPTLV
Trigger: CACGAGGGTGGGGAAGAAGTGGACAGGAGTGGACAAGTCAAGTAGTGCTGCCGGCTCAAGCGATGCCTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399441.4
CDS-3UTR TCA 90 bp TCCCCACCCTCGTGCACAGGTGTGATGCCACGAGCACTCCATAAACCTGCTGCCTTGCCATTTCTGGCGTaGTGGAGAAGCTGTTGCTCC +
Preference number: 4 (lower is better)
Translates to: SPPSCTGVMPRALHKPAALPFLA*WRSCCS
Trigger: GGAGCAACAGCTTCTCCATCACGCCAGAAATGGCAA...GGCAGCAGGTTTATGGAGTGCTCGTGGCATCACACCTGTGCACGAGGGTGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399441.4
CDS-3UTR TCA 90 bp TTGCGTGTGGTGGGCCTGGGTGACTGCACCTGTAAAGATAAGCTATCACTTTGCACAGCCGCGAGAAACTaGCCTACGCGGTCACCCGGG +
Preference number: 4 (lower is better)
Translates to: LRVVGLGDCTCKDKLSLCTAARN*PTRSPG
Trigger: CCCGGGTGACCGCGTAGGTCAGTTTCTCGCGGCTGT...GCAAAGTGATAGCTTATCTTTACAGGTGCAGTCACCCAGGCCCACCACACGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399441.4
CDS-3UTR GCA 90 bp TTGTTAACTTCAAGACAGCAATTAAAATCACGGACTGGCAGCTACCTAGGCCCCGTCGGGCAGAGGCGTTaGCCGCCAGCGGCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: LLTSRQQLKSRTGSYLGPVGQRR*PPAAQD
Trigger: GTCCTGGGCCGCTGGCGGGCAACGCCTCTGCCCGAC...GGGGCCTAGGTAGCTGCCAGTCCGTGATTTTAATTGCTGTCTTGAAGTTAACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399443.7
CDS-3UTR CCA 90 bp ATCACGGACTGGCAGCTACCTAGGCCCCTGGGAGCAGTATCTCAGTCTGGGGTTCATCTGGGCAGAATTTaGAGGCCGTGGGGCTATTCG +
Preference number: 4 (lower is better)
Translates to: ITDWQLPRPLGAVSQSGVHLGRI*RPWGYS
Trigger: CGAATAGCCCCACGGCCTCCAAATTCTGCCCAGATG...AACCCCAGACTGAGATACTGCTCCCAGGGGCCTAGGTAGCTGCCAGTCCGTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR TCA 90 bp ATCACGGACTGGCAGCTACCTAGGCCCCTGGGAGCAGTATCTCAGTCTGGGGTTCACAGGATCAGAGAGTaGACTGGCCTTGTGGATGAG +
Preference number: 4 (lower is better)
Translates to: ITDWQLPRPLGAVSQSGVHRIRE*TGLVDE
Trigger: CTCATCCACAAGGCCAGTTCACTCTCTGATCCTGTG...AACCCCAGACTGAGATACTGCTCCCAGGGGCCTAGGTAGCTGCCAGTCCGTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR TCA 90 bp TTGTTAACTTCAAGACAGCAATTAAAATCACGGACTGGCAGCTACCTAGGCCCCTCCTTGGGCTCTACGTaGGTGCCGCGCCGAGGCGCC +
Preference number: 4 (lower is better)
Translates to: LLTSRQQLKSRTGSYLGPSLGST*VPRRGA
Trigger: GGCGCCTCGGCGCGGCACTCACGTAGAGCCCAAGGA...GGGGCCTAGGTAGCTGCCAGTCCGTGATTTTAATTGCTGTCTTGAAGTTAACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399443.7
CDS-3UTR GCA 90 bp ATCACGGACTGGCAGCTACCTAGGCCCCTGGGAGCAGTATCTCAGTCTGGGGTTGGAGCGTGCTGTCACTaGTTCCAATCTACTCAGGGA +
Preference number: 4 (lower is better)
Translates to: ITDWQLPRPLGAVSQSGVGACCH*FQSTQG
Trigger: TCCCTGAGTAGATTGGAAGCAGTGACAGCACGCTCC...AACCCCAGACTGAGATACTGCTCCCAGGGGCCTAGGTAGCTGCCAGTCCGTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR CCA 90 bp TTTCTACAGCTTTCGTCCTGTAAAGGCAGCTCGATGAAGCGGCGTGTCTCCCATGTCACCAACTCTGGCTaGCACTCCCCGAGGACGCTC +
Preference number: 4 (lower is better)
Translates to: FLQLSSCKGSSMKRRVSHVTNSG*HSPRTL
Trigger: GAGCGTCCTCGGGGAGTGCCAGCCAGAGTTGGTGAC...ATGGGAGACACGCCGCTTCATCGAGCTGCCTTTACAGGACGAAAGCTGTAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582645.5
CDS-3UTR CCA 90 bp ACAGAAGGGAGCACAGTGCCTGGTTGGCTTCAACAGGTTTTGGGGCAGCTTATTGGTCGTCACCAACTCTaGCTGGCACTCCCCGAGGAC +
Preference number: 4 (lower is better)
Translates to: TEGSTVPGWLQQVLGQLIGRHQL*LALPED
Trigger: GTCCTCGGGGAGTGCCAGCCAGAGTTGGTGACGACC...AATAAGCTGCCCCAAAACCTGTTGAAGCCAACCAGGCACTGTGCTCCCTTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000399441.4
CDS-3UTR CCA 90 bp TTTCTACAGCTTTCGTCCTGTAAAGGCAGCTCGATGAAGCGGCGTGTCTCCCATGGTCGTCACCAACTCTaGCTGGCACTCCCCGAGGAC +
Preference number: 4 (lower is better)
Translates to: FLQLSSCKGSSMKRRVSHGRHQL*LALPED
Trigger: GTCCTCGGGGAGTGCCAGCCAGAGTTGGTGACGACC...ATGGGAGACACGCCGCTTCATCGAGCTGCCTTTACAGGACGAAAGCTGTAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582645.5
CDS-3UTR TCA 90 bp ATCACGGACTGGCAGCTACCTAGGCCCCTGGGAGCAGTATCTCAGTCTGGGGTTGACTGCTCTAATTCATaGTGTTCAGTGGCCAGCGTC +
Preference number: 4 (lower is better)
Translates to: ITDWQLPRPLGAVSQSGVDCSNS*CSVASV
Trigger: GACGCTGGCCACTGAACATCATGAATTAGAGCAGTC...AACCCCAGACTGAGATACTGCTCCCAGGGGCCTAGGTAGCTGCCAGTCCGTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR CCA 90 bp AACTTCAAGACAGCAATTAAAATCACGGACTGGCAGCTACCTAGGCCCCTGGGAGTCACCAACTCTGGCTaGCACTCCCCGAGGACGCTC +
Preference number: 4 (lower is better)
Translates to: NFKTAIKITDWQLPRPLGVTNSG*HSPRTL
Trigger: GAGCGTCCTCGGGGAGTGCCAGCCAGAGTTGGTGAC...TCCCAGGGGCCTAGGTAGCTGCCAGTCCGTGATTTTAATTGCTGTCTTGAAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319481.8
CDS-3UTR CCA 90 bp CAGAAGGGAGCACAGTGCCTGGTTGGCTTCAACAGGTTTTGGGGCAGCTTATTCCCCACGTCGAGGAAGTaGTCGTCACCAACTCTGGCT +
Preference number: 4 (lower is better)
Translates to: QKGAQCLVGFNRFWGSLFPTSRK*SSPTLA
Trigger: AGCCAGAGTTGGTGACGACCACTTCCTCGACGTGGG...GAATAAGCTGCCCCAAAACCTGTTGAAGCCAACCAGGCACTGTGCTCCCTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000399441.4
CDS-3UTR CCA 90 bp ATCACGGACTGGCAGCTACCTAGGCCCCTGGGAGCAGTATCTCAGTCTGGGGTTGCCTTCAACAGATCCTaGACCACTTGTCTGTGTCCA +
Preference number: 4 (lower is better)
Translates to: ITDWQLPRPLGAVSQSGVAFNRS*TTCLCP
Trigger: TGGACACAGACAAGTGGTCCAGGATCTGTTGAAGGC...AACCCCAGACTGAGATACTGCTCCCAGGGGCCTAGGTAGCTGCCAGTCCGTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319481.8
CDS-3UTR TCA 90 bp ACAGAAGGGAGCACAGTGCCTGGTTGGCTTCAACAGGTTTTGGGGCAGCTTATTGTAAAGGCAGCTCGATaGAGCGGCGTGTCTCCCATG +
Preference number: 4 (lower is better)
Translates to: TEGSTVPGWLQQVLGQLIVKAAR*SGVSPM
Trigger: CATGGGAGACACGCCGCTTCATCGAGCTGCCTTTAC...AATAAGCTGCCCCAAAACCTGTTGAAGCCAACCAGGCACTGTGCTCCCTTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399441.4
CDS-3UTR TCA 90 bp TTTCTACAGCTTTCGTCCTGTAAAGGCAGCTCGATGAAGCGGCGTGTCTCCCATGTAAAGGCAGCTCGATaGAGCGGCGTGTCTCCCATG +
Preference number: 4 (lower is better)
Translates to: FLQLSSCKGSSMKRRVSHVKAAR*SGVSPM
Trigger: CATGGGAGACACGCCGCTTCATCGAGCTGCCTTTAC...ATGGGAGACACGCCGCTTCATCGAGCTGCCTTTACAGGACGAAAGCTGTAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582645.5
CDS-3UTR TCA 90 bp TTGCGTGTGGTGGGCCTGGGTGACTGCACCTGTAAAGATAAGCTATCACTTTGCGCCGGCAGCACTACTTaGCTTGTCCACTCCTGTCCA +
Preference number: 4 (lower is better)
Translates to: LRVVGLGDCTCKDKLSLCAGSTT*LVHSCP
Trigger: TGGACAGGAGTGGACAAGTCAAGTAGTGCTGCCGGC...GCAAAGTGATAGCTTATCTTTACAGGTGCAGTCACCCAGGCCCACCACACGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399441.4
CDS-3UTR GCA 90 bp ATCACGGACTGGCAGCTACCTAGGCCCCTGGGAGCAGTATCTCAGTCTGGGGTTCTCTTCAAAGGAGCGTaGTGTCACTGCTTCCAATCT +
Preference number: 4 (lower is better)
Translates to: ITDWQLPRPLGAVSQSGVLFKGA*CHCFQS
Trigger: AGATTGGAAGCAGTGACAGCACGCTCCTTTGAAGAG...AACCCCAGACTGAGATACTGCTCCCAGGGGCCTAGGTAGCTGCCAGTCCGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR GCA 90 bp ATCACGGACTGGCAGCTACCTAGGCCCCTGGGAGCAGTATCTCAGTCTGGGGTTTTCTGTCCCAGTAGCTaGCAGAGTAAATCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: ITDWQLPRPLGAVSQSGVFCPSS*QSKSSP
Trigger: AGGACTGGATTTACTCTGGCAGCTACTGGGACAGAA...AACCCCAGACTGAGATACTGCTCCCAGGGGCCTAGGTAGCTGCCAGTCCGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR GCA 90 bp ACACTTGTTAACTTCAAGACAGCAATTAAAATCACGGACTGGCAGCTACCTAGGCCGCGCCGAGGCGCCTaGGAGGTCCTAGAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: TLVNFKTAIKITDWQLPRPRRGA*EVLELL
Trigger: CAGCAGCTCTAGGACCTCGCAGGCGCCTCGGCGCGG...CCTAGGTAGCTGCCAGTCCGTGATTTTAATTGCTGTCTTGAAGTTAACAAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399443.7
CDS-3UTR GCA 90 bp TTGTTAACTTCAAGACAGCAATTAAAATCACGGACTGGCAGCTACCTAGGCCCCCGAATGCGCTCGGCCTaGTCCTCCTCCTCCCCTCCA +
Preference number: 4 (lower is better)
Translates to: LLTSRQQLKSRTGSYLGPRMRSA*SSSSPP
Trigger: TGGAGGGGAGGAGGAGGAGCAGGCCGAGCGCATTCG...GGGGCCTAGGTAGCTGCCAGTCCGTGATTTTAATTGCTGTCTTGAAGTTAACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000399443.7
CDS-3UTR GCA 90 bp CCATACTGTTCGATCCACAGTTTACCCACAATGATATTATGCACACAGCAGGTGTGGCGCGCTCCACCCTaGGCTCCTCGCAAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: PYCSIHSLPTMILCTQQVWRAPP*APRKLQ
Trigger: CTGGAGCTTGCGAGGAGCGCAGGGTGGAGCGCGCCA...CACCTGCTGTGTGCATAATATCATTGTGGGTAAACTGTGGATCGAACAGTATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578055.5
CDS-3UTR CCA 90 bp TTTCTACAGCTTTCGTCCTGTAAAGGCAGCTCGATGAAGCGGCGTGTCTCCCATCCCACGTCGAGGAAGTaGTCGTCACCAACTCTGGCT +
Preference number: 4 (lower is better)
Translates to: FLQLSSCKGSSMKRRVSHPTSRK*SSPTLA
Trigger: AGCCAGAGTTGGTGACGACCACTTCCTCGACGTGGG...ATGGGAGACACGCCGCTTCATCGAGCTGCCTTTACAGGACGAAAGCTGTAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582645.5
CDS-3UTR CCA 90 bp GAAAGTTGGAAATTTCCCTATCTAGTCGCTGTTGGCATGACTGTGCTTTCTCTAGAGCTCCCGAGGCGGTaGCCACGACCCCAGGCTTCC +
Preference number: 4 (lower is better)
Translates to: ESWKFPYLVAVGMTVLSLELPRR*PRPQAS
Trigger: GGAAGCCTGGGGTCGTGGCCACCGCCTCGGGAGCTC...TAGAGAAAGCACAGTCATGCCAACAGCGACTAGATAGGGAAATTTCCAACTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578091.5
ENST00000579851.5
CDS-3UTR CCA 90 bp ATCACGGACTGGCAGCTACCTAGGCCCCTGGGAGCAGTATCTCAGTCTGGGGTTAGTCTCTCCCAGCAGTaGGTTGAAAGGTTTTCCAGT +
Preference number: 4 (lower is better)
Translates to: ITDWQLPRPLGAVSQSGVSLSQQ*VERFSS
Trigger: ACTGGAAAACCTTTCAACCCACTGCTGGGAGAGACT...AACCCCAGACTGAGATACTGCTCCCAGGGGCCTAGGTAGCTGCCAGTCCGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR CCA 90 bp TGCATTTGCGTGTGGTGGGCCTGGGTGACTGCACCTGTAAAGATAAGCTATCACTGCGTGTGGTGGGCCTaGGTGACTGCACCTGTAAAG +
Preference number: 4 (lower is better)
Translates to: CICVWWAWVTAPVKISYHCVWWA*VTAPVK
Trigger: CTTTACAGGTGCAGTCACCCAGGCCCACCACACGCA...GTGATAGCTTATCTTTACAGGTGCAGTCACCCAGGCCCACCACACGCAAATGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399441.4
CDS-3UTR CCA 90 bp GAAGGGAGCACAGTGCCTGGTTGGCTTCAACAGGTTTTGGGGCAGCTTATTCCAAGCACAGTGCCTGGTTaGCTTCAACAGGTTTTGGGG +
Preference number: 4 (lower is better)
Translates to: EGSTVPGWLQQVLGQLIPSTVPG*LQQVLG
Trigger: CCCCAAAACCTGTTGAAGCCAACCAGGCACTGTGCT...TGGAATAAGCTGCCCCAAAACCTGTTGAAGCCAACCAGGCACTGTGCTCCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000399441.4
CDS-3UTR TCA 90 bp TTTCTACAGCTTTCGTCCTGTAAAGGCAGCTCGATGAAGCGGCGTGTCTCCCATTTGCCATTTCTGGCGTaGTGGAGAAGCTGTTGCTCC +
Preference number: 4 (lower is better)
Translates to: FLQLSSCKGSSMKRRVSHLPFLA*WRSCCS
Trigger: GGAGCAACAGCTTCTCCATCACGCCAGAAATGGCAA...ATGGGAGACACGCCGCTTCATCGAGCTGCCTTTACAGGACGAAAGCTGTAGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582645.5
CDS-3UTR GCA 90 bp ATCACGGACTGGCAGCTACCTAGGCCCCTGGGAGCAGTATCTCAGTCTGGGGTTCATGAAAGGACTCCATaGTCTAACACTACCCAGAAT +
Preference number: 4 (lower is better)
Translates to: ITDWQLPRPLGAVSQSGVHERTP*SNTTQN
Trigger: ATTCTGGGTAGTGTTAGAGCATGGAGTCCTTTCATG...AACCCCAGACTGAGATACTGCTCCCAGGGGCCTAGGTAGCTGCCAGTCCGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319481.8
CDS-3UTR GCA 90 bp CTGCTTCCAATCTACTCAGGGACCTTTCGGACTCGGAATCTGACAGCGCATCATGGAGCGTGCTGTCACTaGTTCCAATCTACTCAGGGA +
Preference number: 4 (lower is better)
Translates to: LLPIYSGTFRTRNLTAHHGACCH*FQSTQG
Trigger: TCCCTGAGTAGATTGGAAGCAGTGACAGCACGCTCC...ATGATGCGCTGTCAGATTCCGAGTCCGAAAGGTCCCTGAGTAGATTGGAAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584119.1
CDS-3UTR GCA 90 bp ATCACGGACTGGCAGCTACCTAGGCCCCTGGGAGCAGTATCTCAGTCTGGGGTTTTTCTACTGCCCAAATaGTCTCCTTCCTCTTCAAAG +
Preference number: 4 (lower is better)
Translates to: ITDWQLPRPLGAVSQSGVFLLPK*SPSSSK
Trigger: CTTTGAAGAGGAAGGAGAGCATTTGGGCAGTAGAAA...AACCCCAGACTGAGATACTGCTCCCAGGGGCCTAGGTAGCTGCCAGTCCGTGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR GCA 90 bp TCGTCCTCGCTAAGGATGCTGGCGGGTGGAGAGCCTTTCACCAGAGACTGCTCTTTTCTACTGCCCAAATaGTCTCCTTCCTCTTCAAAG +
Preference number: 4 (lower is better)
Translates to: SSSLRMLAGGEPFTRDCSFLLPK*SPSSSK
Trigger: CTTTGAAGAGGAAGGAGAGCATTTGGGCAGTAGAAA...AGAGCAGTCTCTGGTGAAAGGCTCTCCACCCGCCAGCATCCTTAGCGAGGACGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584119.1
CDS-3UTR GCA 90 bp ATCACGGACTGGCAGCTACCTAGGCCCCTGGGAGCAGTATCTCAGTCTGGGGTTACTTGGACCTGTTTTTaGGGGCTGCTCTTTGTTTTT +
Preference number: 4 (lower is better)
Translates to: ITDWQLPRPLGAVSQSGVTWTCF*GLLFVF
Trigger: AAAAACAAAGAGCAGCCCGCAAAAACAGGTCCAAGT...AACCCCAGACTGAGATACTGCTCCCAGGGGCCTAGGTAGCTGCCAGTCCGTGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR GCA 90 bp GCTAACAGAACCAGGAGAAGAGGCTTCTTCTCCACGAGGCTAGGATGTTCAAAGGAACATTGGGGTCCTTaGATCCAAGGACCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: ANRTRRRGFFSTRLGCSKEHWGP*IQGPAG
Trigger: GCCTGCTGGTCCTTGGATGCAAGGACCCCAATGTTC...CTTTGAACATCCTAGCCTCGTGGAGAAGAAGCCTCTTCTCCTGGTTCTGTTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399441.4
CDS-3UTR CCA 90 bp TGTTGGCATGACTGTGCTTTCTCTAATGATTTCTTCAGGTCTGCAGCAGAAACCGTCACCAACTCTGGCTaGCACTCCCCGAGGACGCTC +
Preference number: 4 (lower is better)
Translates to: CWHDCAFSNDFFRSAAETVTNSG*HSPRTL
Trigger: GAGCGTCCTCGGGGAGTGCCAGCCAGAGTTGGTGAC...GGTTTCTGCTGCAGACCTGAAGAAATCATTAGAGAAAGCACAGTCATGCCAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578091.5
ENST00000579851.5
CDS-3UTR CCA 90 bp TTCTCTAATGATTTCTTCAGGTCTGCAGCAGAAACCGTATCTTCCTCCTCCTCAGGTCGTCACCAACTCTaGCTGGCACTCCCCGAGGAC +
Preference number: 4 (lower is better)
Translates to: FSNDFFRSAAETVSSSSSGRHQL*LALPED
Trigger: GTCCTCGGGGAGTGCCAGCCAGAGTTGGTGACGACC...TGAGGAGGAGGAAGATACGGTTTCTGCTGCAGACCTGAAGAAATCATTAGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578091.5
ENST00000579851.5
CDS-3UTR CCA 90 bp TTTTTCCTAAGACTTTCATCACCAATATCGCCTTATACCCTGCTTTTGTTGGGTGAGCTCCCGAGGCGGTaGCCACGACCCCAGGCTTCC +
Preference number: 4 (lower is better)
Translates to: FFLRLSSPISPYTLLLLGELPRR*PRPQAS
Trigger: GGAAGCCTGGGGTCGTGGCCACCGCCTCGGGAGCTC...ACCCAACAAAAGCAGGGTATAAGGCGATATTGGTGATGAAAGTCTTAGGAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000319481.8
CDS-3UTR CCA 90 bp AGATTAAGGCAATCAGTCAAAGCTACACAAGTTTCTCTAGAAGCTTCTGAGACAGAGCTCCCGAGGCGGTaGCCACGACCCCAGGCTTCC +
Preference number: 4 (lower is better)
Translates to: RLRQSVKATQVSLEASETELPRR*PRPQAS
Trigger: GGAAGCCTGGGGTCGTGGCCACCGCCTCGGGAGCTC...TGTCTCAGAAGCTTCTAGAGAAACTTGTGTAGCTTTGACTGATTGCCTTAATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578091.5
ENST00000579851.5
CDS-3UTR CCA 90 bp TCCCCACCCTCGTGCACAGGTGTGATGCCACGAGCACTCCATAAACCTGCTGCCAACTCAGGTGTGTCCTaGTATTCTCTTGTCCAATTT +
Preference number: 4 (lower is better)
Translates to: SPPSCTGVMPRALHKPAANSGVS*YSLVQF
Trigger: AAATTGGACAAGAGAATACCAGGACACACCTGAGTT...GGCAGCAGGTTTATGGAGTGCTCGTGGCATCACACCTGTGCACGAGGGTGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399441.4
CDS-3UTR CCA 90 bp GAAGGGAGCACAGTGCCTGGTTGGCTTCAACAGGTTTTGGGGCAGCTTATTCCAGGCTTCAACAGGTTTTaGGGCAGCTTATTCCACACC +
Preference number: 4 (lower is better)
Translates to: EGSTVPGWLQQVLGQLIPGFNRF*GSLFHT
Trigger: GGTGTGGAATAAGCTGCCCCAAAACCTGTTGAAGCC...TGGAATAAGCTGCCCCAAAACCTGTTGAAGCCAACCAGGCACTGTGCTCCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000399441.4
CDS-3UTR TCA 90 bp AACTTCAAGACAGCAATTAAAATCACGGACTGGCAGCTACCTAGGCCCCTGGGATTGCCATTTCTGGCGTaGTGGAGAAGCTGTTGCTCC +
Preference number: 4 (lower is better)
Translates to: NFKTAIKITDWQLPRPLGLPFLA*WRSCCS
Trigger: GGAGCAACAGCTTCTCCATCACGCCAGAAATGGCAA...TCCCAGGGGCCTAGGTAGCTGCCAGTCCGTGATTTTAATTGCTGTCTTGAAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319481.8
CDS-3UTR TCA 90 bp AACTTCAAGACAGCAATTAAAATCACGGACTGGCAGCTACCTAGGCCCCTGGGACTCCCAGCAGTGGGTTaGAAGGTTTTCCAGTCCGTT +
Preference number: 4 (lower is better)
Translates to: NFKTAIKITDWQLPRPLGLPAVG*KVFQSV
Trigger: AACGGACTGGAAAACCTTTCAACCCACTGCTGGGAG...TCCCAGGGGCCTAGGTAGCTGCCAGTCCGTGATTTTAATTGCTGTCTTGAAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR TCA 90 bp AACTTCAAGACAGCAATTAAAATCACGGACTGGCAGCTACCTAGGCCCCTGGGACATTTTCCATGGCTCTaGTGTCAGGCCGTAACCTGC +
Preference number: 4 (lower is better)
Translates to: NFKTAIKITDWQLPRPLGHFPWL*CQAVTC
Trigger: GCAGGTTACGGCCTGACATCAGAGCCATGGAAAATG...TCCCAGGGGCCTAGGTAGCTGCCAGTCCGTGATTTTAATTGCTGTCTTGAAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR TCA 90 bp GAAGGGAGCACAGTGCCTGGTTGGCTTCAACAGGTTTTGGGGCAGCTTATTCCACTAGGAATTTCCTTGTaGGCAAAATATGGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: EGSTVPGWLQQVLGQLIPLGISL*AKYGGG
Trigger: GCCTCCCCCATATTTTGCTCACAAGGAAATTCCTAG...TGGAATAAGCTGCCCCAAAACCTGTTGAAGCCAACCAGGCACTGTGCTCCCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000399441.4
CDS-3UTR GCA 90 bp TTTCTACAGCTTTCGTCCTGTAAAGGCAGCTCGATGAAGCGGCGTGTCTCCCATATGGGCCCGGTAAGCTaGACAATGCAAGGGTGTATT +
Preference number: 4 (lower is better)
Translates to: FLQLSSCKGSSMKRRVSHMGPVS*TMQGCI
Trigger: AATACACCCTTGCATTGTGCAGCTTACCGGGCCCAT...ATGGGAGACACGCCGCTTCATCGAGCTGCCTTTACAGGACGAAAGCTGTAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582645.5
CDS-3UTR GCA 90 bp ACACTTGTTAACTTCAAGACAGCAATTAAAATCACGGACTGGCAGCTACCTAGGAAGCTCCAGCGCGAATaGGCTCGGCCTGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: TLVNFKTAIKITDWQLPRKLQRE*ARPAPP
Trigger: AGGAGGAGCAGGCCGAGCGCATTCGCGCTGGAGCTT...CCTAGGTAGCTGCCAGTCCGTGATTTTAATTGCTGTCTTGAAGTTAACAAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399443.7
CDS-3UTR CCA 90 bp TCCAGTGGGTGGGAGGTAAAACTTAGGAAGAATTCAGGAGCTTTTCCATGTCAGTGCATTTGCGTGTGGTaGGCCTGGGTGACTGCACCT +
Preference number: 4 (lower is better)
Translates to: SSGWEVKLRKNSGAFPCQCICVW*AWVTAP
Trigger: AGGTGCAGTCACCCAGGCCCACCACACGCAAATGCA...CTGACATGGAAAAGCTCCTGAATTCTTCCTAAGTTTTACCTCCCACCCACTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399441.4
CDS-3UTR CCA 90 bp ACACTTGTTAACTTCAAGACAGCAATTAAAATCACGGACTGGCAGCTACCTAGGTCGGGGACTGCTCCTTaGGCTCTACGTGAGTGCCGC +
Preference number: 4 (lower is better)
Translates to: TLVNFKTAIKITDWQLPRSGTAP*ALRECR
Trigger: GCGGCACTCACGTAGAGCCCAAGGAGCAGTCCCCGA...CCTAGGTAGCTGCCAGTCCGTGATTTTAATTGCTGTCTTGAAGTTAACAAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399443.7
CDS-3UTR TCA 90 bp AACTTCAAGACAGCAATTAAAATCACGGACTGGCAGCTACCTAGGCCCCTGGGAGGAACCCGGAAGCCATaGATGGTGTCATCAAAGCAT +
Preference number: 4 (lower is better)
Translates to: NFKTAIKITDWQLPRPLGGTRKP*MVSSKH
Trigger: ATGCTTTGATGACACCATTCATGGCTTCCGGGTTCC...TCCCAGGGGCCTAGGTAGCTGCCAGTCCGTGATTTTAATTGCTGTCTTGAAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319481.8
CDS-3UTR TCA 90 bp ATCACGGACTGGCAGCTACCTAGGCCCCTGGGAGCAGTATCTCAGTCTGGGGTTAAATGTCAGGCAAATTaGAGTAATTTCTGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: ITDWQLPRPLGAVSQSGVKCQAN*SNFCPS
Trigger: ACTGGGACAGAAATTACTTCAATTTGCCTGACATTT...AACCCCAGACTGAGATACTGCTCCCAGGGGCCTAGGTAGCTGCCAGTCCGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR TCA 90 bp ATCACGGACTGGCAGCTACCTAGGCCCCTGGGAGCAGTATCTCAGTCTGGGGTTAGTTTGATACTTACATaGGTGCAACTTACTTTCCCT +
Preference number: 4 (lower is better)
Translates to: ITDWQLPRPLGAVSQSGVSLILT*VQLTFP
Trigger: AGGGAAAGTAAGTTGCACTCATGTAAGTATCAAACT...AACCCCAGACTGAGATACTGCTCCCAGGGGCCTAGGTAGCTGCCAGTCCGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR TCA 90 bp ACAGAAGGGAGCACAGTGCCTGGTTGGCTTCAACAGGTTTTGGGGCAGCTTATTCAACAGGGACAACTTTaGAGCATCATCTCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: TEGSTVPGWLQQVLGQLIQQGQL*SIISSA
Trigger: TGCAGAGGAGATGATGCTTCAAAGTTGTCCCTGTTG...AATAAGCTGCCCCAAAACCTGTTGAAGCCAACCAGGCACTGTGCTCCCTTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399441.4
CDS-3UTR GCA 90 bp AACTTCAAGACAGCAATTAAAATCACGGACTGGCAGCTACCTAGGCCCCTGGGATGTCAGGCCGTAACCTaGAGTCTGTCTTGGGAATCA +
Preference number: 4 (lower is better)
Translates to: NFKTAIKITDWQLPRPLGCQAVT*SLSWES
Trigger: TGATTCCCAAGACAGACTGCAGGTTACGGCCTGACA...TCCCAGGGGCCTAGGTAGCTGCCAGTCCGTGATTTTAATTGCTGTCTTGAAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR CCA 90 bp GTGTTTGCATCCCTGGCGATAAATATTATGAACTGCATCAGGCTGTTTCCTATAGGTCGTCACCAACTCTaGCTGGCACTCCCCGAGGAC +
Preference number: 4 (lower is better)
Translates to: VFASLAINIMNCIRLFPIGRHQL*LALPED
Trigger: GTCCTCGGGGAGTGCCAGCCAGAGTTGGTGACGACC...TATAGGAAACAGCCTGATGCAGTTCATAATATTTATCGCCAGGGATGCAAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578091.5
ENST00000579851.5
CDS-3UTR CCA 90 bp CTATACCATGAAAGGACTCCATGCTCTAACACTACCCAGAATAATCTCCAGCCACCCACGTCGAGGAAGTaGTCGTCACCAACTCTGGCT +
Preference number: 4 (lower is better)
Translates to: LYHERTPCSNTTQNNLQPPTSRK*SSPTLA
Trigger: AGCCAGAGTTGGTGACGACCACTTCCTCGACGTGGG...TGGCTGGAGATTATTCTGGGTAGTGTTAGAGCATGGAGTCCTTTCATGGTATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578091.5
ENST00000579851.5
CDS-3UTR CCA 90 bp TGTTGGCATGACTGTGCTTTCTCTAATGATTTCTTCAGGTCTGCAGCAGAAACCCCCACGTCGAGGAAGTaGTCGTCACCAACTCTGGCT +
Preference number: 4 (lower is better)
Translates to: CWHDCAFSNDFFRSAAETPTSRK*SSPTLA
Trigger: AGCCAGAGTTGGTGACGACCACTTCCTCGACGTGGG...GGTTTCTGCTGCAGACCTGAAGAAATCATTAGAGAAAGCACAGTCATGCCAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000578091.5
ENST00000579851.5
CDS-3UTR CCA 90 bp GCTAACAGAACCAGGAGAAGAGGCTTCTTCTCCACGAGGCTAGGATGTTCAAAGGCCTTCAACAGATCCTaGACCACTTGTCTGTGTCCA +
Preference number: 4 (lower is better)
Translates to: ANRTRRRGFFSTRLGCSKAFNRS*TTCLCP
Trigger: TGGACACAGACAAGTGGTCCAGGATCTGTTGAAGGC...CTTTGAACATCCTAGCCTCGTGGAGAAGAAGCCTCTTCTCCTGGTTCTGTTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399441.4
CDS-3UTR CCA 90 bp TTTCTACAGCTTTCGTCCTGTAAAGGCAGCTCGATGAAGCGGCGTGTCTCCCATTTCATTTCAGCACCCTaGGCAAGGTCAAGAGGTTTC +
Preference number: 4 (lower is better)
Translates to: FLQLSSCKGSSMKRRVSHFISAP*ARSRGF
Trigger: GAAACCTCTTGACCTTGCCCAGGGTGCTGAAATGAA...ATGGGAGACACGCCGCTTCATCGAGCTGCCTTTACAGGACGAAAGCTGTAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582645.5
CDS-3UTR CCA 90 bp TTGTTAACTTCAAGACAGCAATTAAAATCACGGACTGGCAGCTACCTAGGCCCCCATCTGGGCAGAATTTaGAGGCCGTGGGGCTATTCG +
Preference number: 4 (lower is better)
Translates to: LLTSRQQLKSRTGSYLGPHLGRI*RPWGYS
Trigger: CGAATAGCCCCACGGCCTCCAAATTCTGCCCAGATG...GGGGCCTAGGTAGCTGCCAGTCCGTGATTTTAATTGCTGTCTTGAAGTTAACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR CCA 90 bp GATATGCATTTGCGTGTGGTGGGCCTGGGTGACTGCACCTGTAAAGATAAGCTAAGGGAGCACAGTGCCTaGTTGGCTTCAACAGGTTTT +
Preference number: 4 (lower is better)
Translates to: DMHLRVVGLGDCTCKDKLREHSA*LASTGF
Trigger: AAAACCTGTTGAAGCCAACCAGGCACTGTGCTCCCT...TAGCTTATCTTTACAGGTGCAGTCACCCAGGCCCACCACACGCAAATGCATATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399441.4
3UTR CAA 72 bp GAAGGGAGCACAGTGCCTGGTTGGCTTCAACAGGTTTaGGGGCAGCTTATTCCACACCTAAAGATAATGCTC +
Preference number: 4 (lower is better)
Translates to: EGSTVPGWLQQV*GQLIPHLKIML
Trigger: GAGCATTATCTTTAGGTGTGGAATAAGCTGCCCCAAAACCTGTTGAAGCCAACCAGGCACTGTGCTCCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399441.4
CDS-3UTR TCA 90 bp TTGTTAACTTCAAGACAGCAATTAAAATCACGGACTGGCAGCTACCTAGGCCCCACCGTGCATACTGCTTaGGTCAGGTGTTTGCATCCC +
Preference number: 4 (lower is better)
Translates to: LLTSRQQLKSRTGSYLGPTVHTA*VRCLHP
Trigger: GGGATGCAAACACCTGACTCAAGCAGTATGCACGGT...GGGGCCTAGGTAGCTGCCAGTCCGTGATTTTAATTGCTGTCTTGAAGTTAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319481.8
CDS-3UTR TCA 90 bp CATCTCCGCCACCACAGTCTTTTTCTTCGGACATTCTGTGTTTTCTACTGCCCAGACTGCTCTAATTCATaGTGTTCAGTGGCCAGCGTC +
Preference number: 4 (lower is better)
Translates to: HLRHHSLFLRTFCVFYCPDCSNS*CSVASV
Trigger: GACGCTGGCCACTGAACATCATGAATTAGAGCAGTC...TGGGCAGTAGAAAACACAGAATGTCCGAAGAAAAAGACTGTGGTGGCGGAGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584119.1
CDS-3UTR GCA 90 bp TGCATTTGCGTGTGGTGGGCCTGGGTGACTGCACCTGTAAAGATAAGCTATCACCAACACATTCACTTCTaGACCAGCCTTCAACAGATC +
Preference number: 4 (lower is better)
Translates to: CICVWWAWVTAPVKISYHQHIHF*TSLQQI
Trigger: GATCTGTTGAAGGCTGGTGCAGAAGTGAATGTGTTG...GTGATAGCTTATCTTTACAGGTGCAGTCACCCAGGCCCACCACACGCAAATGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399441.4
CDS-3UTR GCA 90 bp AACTTCAAGACAGCAATTAAAATCACGGACTGGCAGCTACCTAGGCCCCTGGGACCAACTCCTCAGAGGTaGTCATCTGTTTGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: NFKTAIKITDWQLPRPLGPTPQR*SSVCCS
Trigger: AGAACAGCAAACAGATGAGCACCTCTGAGGAGTTGG...TCCCAGGGGCCTAGGTAGCTGCCAGTCCGTGATTTTAATTGCTGTCTTGAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR GCA 90 bp AGGAGGAGAGTTCTAAATATGTCAAAGGTTACATCTAAAACATTCAAGCATGACTGGCGCGCTCCACCCTaGGCTCCTCGCAAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: RRRVLNMSKVTSKTFKHDWRAPP*APRKLQ
Trigger: CTGGAGCTTGCGAGGAGCGCAGGGTGGAGCGCGCCA...GTCATGCTTGAATGTTTTAGATGTAACCTTTGACATATTTAGAACTCTCCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399443.7
CDS-3UTR CCA 90 bp AGATTAAGGCAATCAGTCAAAGCTACACAAGTTTCTCTAGAAGCTTCTGAGACAGTCACCAACTCTGGCTaGCACTCCCCGAGGACGCTC +
Preference number: 4 (lower is better)
Translates to: RLRQSVKATQVSLEASETVTNSG*HSPRTL
Trigger: GAGCGTCCTCGGGGAGTGCCAGCCAGAGTTGGTGAC...TGTCTCAGAAGCTTCTAGAGAAACTTGTGTAGCTTTGACTGATTGCCTTAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578091.5
ENST00000579851.5
CDS-3UTR CCA 90 bp GTAAATATGGCAACAGCAACCATAAAAAGCATATTCCCCAGCAGTGTTCTCTTAGGTCGTCACCAACTCTaGCTGGCACTCCCCGAGGAC +
Preference number: 4 (lower is better)
Translates to: VNMATATIKSIFPSSVLLGRHQL*LALPED
Trigger: GTCCTCGGGGAGTGCCAGCCAGAGTTGGTGACGACC...TAAGAGAACACTGCTGGGGAATATGCTTTTTATGGTTGCTGTTGCCATATTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000319481.8
CDS-3UTR CCA 90 bp ACTGCTTCCAATCTACTCAGGGACCTTTCGGACTCGGAATCTGACAGCGCATCACTAGGGATAAGGCACTaGTGTCACTTCAGAAGACTT +
Preference number: 4 (lower is better)
Translates to: TASNLLRDLSDSESDSASLGIRH*CHFRRL
Trigger: AAGTCTTCTGAAGTGACACCAGTGCCTTATCCCTAG...TGATGCGCTGTCAGATTCCGAGTCCGAAAGGTCCCTGAGTAGATTGGAAGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584119.1
CDS-3UTR CCA 90 bp CAGAAGGGAGCACAGTGCCTGGTTGGCTTCAACAGGTTTTGGGGCAGCTTATTCCTTGTGAGCAAAATATaGGGGAGGCATGTAGCTTTT +
Preference number: 4 (lower is better)
Translates to: QKGAQCLVGFNRFWGSLFLVSKI*GRHVAF
Trigger: AAAAGCTACATGCCTCCCCCATATTTTGCTCACAAG...GAATAAGCTGCCCCAAAACCTGTTGAAGCCAACCAGGCACTGTGCTCCCTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000399441.4
CDS-3UTR CCA 90 bp TTGTTAACTTCAAGACAGCAATTAAAATCACGGACTGGCAGCTACCTAGGCCCCTTAAAATTCCTCACCTaGGCCAGATCCGAGGACCCC +
Preference number: 4 (lower is better)
Translates to: LLTSRQQLKSRTGSYLGPLKFLT*ARSEDP
Trigger: GGGGTCCTCGGATCTGGCCCAGGTGAGGAATTTTAA...GGGGCCTAGGTAGCTGCCAGTCCGTGATTTTAATTGCTGTCTTGAAGTTAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000399443.7
CDS-3UTR TCA 90 bp TGTTGGCATGACTGTGCTTTCTCTAATGATTTCTTCAGGTCTGCAGCAGAAACCTTGCCATTTCTGGCGTaGTGGAGAAGCTGTTGCTCC +
Preference number: 4 (lower is better)
Translates to: CWHDCAFSNDFFRSAAETLPFLA*WRSCCS
Trigger: GGAGCAACAGCTTCTCCATCACGCCAGAAATGGCAA...GGTTTCTGCTGCAGACCTGAAGAAATCATTAGAGAAAGCACAGTCATGCCAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578091.5
ENST00000579851.5
CDS-3UTR TCA 90 bp TTGTTAACTTCAAGACAGCAATTAAAATCACGGACTGGCAGCTACCTAGGCCCCCTTCCAGTCCTCTTCTaGCTTGGACCTGTTTTTGCG +
Preference number: 4 (lower is better)
Translates to: LLTSRQQLKSRTGSYLGPLPVLF*LGPVFA
Trigger: CGCAAAAACAGGTCCAAGTCAGAAGAGGACTGGAAG...GGGGCCTAGGTAGCTGCCAGTCCGTGATTTTAATTGCTGTCTTGAAGTTAACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR TCA 90 bp TCCTCTTCAAAGGAGCGTGCTGTCACTGCTTCCAATCTACTCAGGGACCTTTCGCTGTGCTTTCTATGCTaGTATTCCTCTAGGGATAAG +
Preference number: 4 (lower is better)
Translates to: SSSKERAVTASNLLRDLSLCFLC*YSSRDK
Trigger: CTTATCCCTAGAGGAATATCAGCATAGAAAGCACAG...CGAAAGGTCCCTGAGTAGATTGGAAGCAGTGACAGCACGCTCCTTTGAAGAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584119.1
CDS-3UTR TCA 90 bp GAGGCAGGTTTGCATGACCCAGTTCTCAGCTTGATTTTTCCCTTTGGCAAAATGCACTGGTCTGGGCAATaGCAAGACACTTCCTCAGAA +
Preference number: 4 (lower is better)
Translates to: EAGLHDPVLSLIFPFGKMHWSGQ*QDTSSE
Trigger: TTCTGAGGAAGTGTCTTGTCATTGCCCAGACCAGTG...CATTTTGCCAAAGGGAAAAATCAAGCTGAGAACTGGGTCATGCAAACCTGCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399441.4
CDS-3UTR GCA 90 bp TTTCTACAGCTTTCGTCCTGTAAAGGCAGCTCGATGAAGCGGCGTGTCTCCCATTTACTTCTTCAGCATTaGCATTTCTGGCGTGATGGA +
Preference number: 4 (lower is better)
Translates to: FLQLSSCKGSSMKRRVSHLLLQH*HFWRDG
Trigger: TCCATCACGCCAGAAATGGCAATGCTGAAGAAGTAA...ATGGGAGACACGCCGCTTCATCGAGCTGCCTTTACAGGACGAAAGCTGTAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582645.5
CDS-3UTR GCA 90 bp CCATACTGTTCGATCCACAGTTTACCCACAATGATATTATGCACACAGCAGGTGGGAGCGTGCTGTCACTaGTTCCAATCTACTCAGGGA +
Preference number: 4 (lower is better)
Translates to: PYCSIHSLPTMILCTQQVGACCH*FQSTQG
Trigger: TCCCTGAGTAGATTGGAAGCAGTGACAGCACGCTCC...CACCTGCTGTGTGCATAATATCATTGTGGGTAAACTGTGGATCGAACAGTATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578055.5
CDS-3UTR GCA 90 bp TCCTCTTCAAAGGAGCGTGCTGTCACTGCTTCCAATCTACTCAGGGACCTTTCGTTCTGTGTTTTCTACTaGCCAAATGCTCTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: SSSKERAVTASNLLRDLSFCVFY*PNALLP
Trigger: AGGAAGGAGAGCATTTGGGCAGTAGAAAACACAGAA...CGAAAGGTCCCTGAGTAGATTGGAAGCAGTGACAGCACGCTCCTTTGAAGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584119.1
CDS-3UTR GCA 90 bp TTGTTAACTTCAAGACAGCAATTAAAATCACGGACTGGCAGCTACCTAGGCCCCGGTTCCTTTGGGTTCTaGTTCTACACTCTTCCCCCA +
Preference number: 4 (lower is better)
Translates to: LLTSRQQLKSRTGSYLGPGSFGF*FYTLPP
Trigger: TGGGGGAAGAGTGTAGAAGCAGAACCCAAAGGAACC...GGGGCCTAGGTAGCTGCCAGTCCGTGATTTTAATTGCTGTCTTGAAGTTAACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR GCA 90 bp GTAAATATGGCAACAGCAACCATAAAAAGCATATTCCCCAGCAGTGTTCTCTTATCCCTAAGTCACCTTTaGGCAGCCTGCCCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: VNMATATIKSIFPSSVLLSLSHL*AACPWL
Trigger: GAGCCAGGGGCAGGCTGCGCAAAGGTGACTTAGGGA...TAAGAGAACACTGCTGGGGAATATGCTTTTTATGGTTGCTGTTGCCATATTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000399443.7
CDS-3UTR CCA 90 bp CCACCTTATTTAGGAACCAAAAGGGGGAGGCAGGTTTGCATGACCCAGTTCTCAAGAAGTTCACTGGTCTaGGCAATGACAAGACACTTC +
Preference number: 4 (lower is better)
Translates to: PPYLGTKRGRQVCMTQFSRSSLV*AMTRHF
Trigger: GAAGTGTCTTGTCATTGCCCAGACCAGTGAACTTCT...TGAGAACTGGGTCATGCAAACCTGCCTCCCCCTTTTGGTTCCTAAATAAGGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399441.4
CDS-3UTR TCA 90 bp TTTCTACAGCTTTCGTCCTGTAAAGGCAGCTCGATGAAGCGGCGTGTCTCCCATGGTGTATTTCCTAACTaGTCCGAACAGTTAACATCA +
Preference number: 4 (lower is better)
Translates to: FLQLSSCKGSSMKRRVSHGVFPN*SEQLTS
Trigger: TGATGTTAACTGTTCGGATCAGTTAGGAAATACACC...ATGGGAGACACGCCGCTTCATCGAGCTGCCTTTACAGGACGAAAGCTGTAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582645.5
CDS-3UTR TCA 90 bp TACCGTGCATACTGCTTGAGTCAGGTGTTTGCATCCCTGGCGATAAATATTATGGGAACCCGGAAGCCATaGATGGTGTCATCAAAGCAT +
Preference number: 4 (lower is better)
Translates to: YRAYCLSQVFASLAINIMGTRKP*MVSSKH
Trigger: ATGCTTTGATGACACCATTCATGGCTTCCGGGTTCC...CATAATATTTATCGCCAGGGATGCAAACACCTGACTCAAGCAGTATGCACGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578091.5
ENST00000579851.5
CDS-3UTR TCA 90 bp CCATACTGTTCGATCCACAGTTTACCCACAATGATATTATGCACACAGCAGGTGGACTGCTCTAATTCATaGTGTTCAGTGGCCAGCGTC +
Preference number: 4 (lower is better)
Translates to: PYCSIHSLPTMILCTQQVDCSNS*CSVASV
Trigger: GACGCTGGCCACTGAACATCATGAATTAGAGCAGTC...CACCTGCTGTGTGCATAATATCATTGTGGGTAAACTGTGGATCGAACAGTATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578055.5
CDS-3UTR TCA 90 bp AACTTCAAGACAGCAATTAAAATCACGGACTGGCAGCTACCTAGGCCCCTGGGAACAGTTTACCCACAATaGTATTATGCACACAGCAGG +
Preference number: 4 (lower is better)
Translates to: NFKTAIKITDWQLPRPLGTVYPQ*YYAHSR
Trigger: CCTGCTGTGTGCATAATATCATTGTGGGTAAACTGT...TCCCAGGGGCCTAGGTAGCTGCCAGTCCGTGATTTTAATTGCTGTCTTGAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR TCA 90 bp CAGAAGGGAGCACAGTGCCTGGTTGGCTTCAACAGGTTTTGGGGCAGCTTATTCTGTTTTTACATAAGATaGCATAAACGGGGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: QKGAQCLVGFNRFWGSLFCFYIR*HKRGRR
Trigger: TCTTCTGCCCCGTTTATGTCATCTTATGTAAAAACA...GAATAAGCTGCCCCAAAACCTGTTGAAGCCAACCAGGCACTGTGCTCCCTTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000399441.4
CDS-3UTR TCA 90 bp TTTCTACAGCTTTCGTCCTGTAAAGGCAGCTCGATGAAGCGGCGTGTCTCCCATTCAAGCTTTCTTTGTTaGGTCCTTTCTACAGCTTTC +
Preference number: 4 (lower is better)
Translates to: FLQLSSCKGSSMKRRVSHSSFLC*VLSTAF
Trigger: GAAAGCTGTAGAAAGGACTCAACAAAGAAAGCTTGA...ATGGGAGACACGCCGCTTCATCGAGCTGCCTTTACAGGACGAAAGCTGTAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582645.5
CDS-3UTR GCA 90 bp AACTTCAAGACAGCAATTAAAATCACGGACTGGCAGCTACCTAGGCCCCTGGGAAGAATGTTCTTCTATTaGTTCCAGCCAGTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: NFKTAIKITDWQLPRPLGRMFFY*FQPVLS
Trigger: AGAGAGGACTGGCTGGAAGCAATAGAAGAACATTCT...TCCCAGGGGCCTAGGTAGCTGCCAGTCCGTGATTTTAATTGCTGTCTTGAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319481.8
CDS-3UTR GCA 90 bp TTGCGTGTGGTGGGCCTGGGTGACTGCACCTGTAAAGATAAGCTATCACTTTGCGCTATCACTTTGCATTaGTCACTAGGAATTTCCTTG +
Preference number: 4 (lower is better)
Translates to: LRVVGLGDCTCKDKLSLCAITLH*SLGISL
Trigger: CAAGGAAATTCCTAGTGAGCAATGCAAAGTGATAGC...GCAAAGTGATAGCTTATCTTTACAGGTGCAGTCACCCAGGCCCACCACACGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399441.4
CDS-3UTR GCA 90 bp AGGAGGAGAGTTCTAAATATGTCAAAGGTTACATCTAAAACATTCAAGCATGACGTCCTAGAGCTGCTGTaGGCTCGGCCCTCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: RRRVLNMSKVTSKTFKHDVLELL*ARPSPG
Trigger: TCCAGGAGAGGGCCGAGCGCACAGCAGCTCTAGGAC...GTCATGCTTGAATGTTTTAGATGTAACCTTTGACATATTTAGAACTCTCCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399443.7
CDS-3UTR CCA 90 bp TTTCTACAGCTTTCGTCCTGTAAAGGCAGCTCGATGAAGCGGCGTGTCTCCCATCTTCATTCCTCGCCATaGTCTCTAATAGTTGTCTTA +
Preference number: 4 (lower is better)
Translates to: FLQLSSCKGSSMKRRVSHLHSSP*SLIVVL
Trigger: TAAGACAACTATTAGAGACCATGGCGAGGAATGAAG...ATGGGAGACACGCCGCTTCATCGAGCTGCCTTTACAGGACGAAAGCTGTAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582645.5
CDS-3UTR CCA 90 bp TTGTTAACTTCAAGACAGCAATTAAAATCACGGACTGGCAGCTACCTAGGCCCCAGTCTCTCCCAGCAGTaGGTTGAAAGGTTTTCCAGT +
Preference number: 4 (lower is better)
Translates to: LLTSRQQLKSRTGSYLGPSLSQQ*VERFSS
Trigger: ACTGGAAAACCTTTCAACCCACTGCTGGGAGAGACT...GGGGCCTAGGTAGCTGCCAGTCCGTGATTTTAATTGCTGTCTTGAAGTTAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR CCA 90 bp TTGTTAACTTCAAGACAGCAATTAAAATCACGGACTGGCAGCTACCTAGGCCCCATGAAATGCACTGATTaGTGGGTGATGGCTGACCTG +
Preference number: 4 (lower is better)
Translates to: LLTSRQQLKSRTGSYLGPMKCTD*WVMADL
Trigger: CAGGTCAGCCATCACCCACCAATCAGTGCATTTCAT...GGGGCCTAGGTAGCTGCCAGTCCGTGATTTTAATTGCTGTCTTGAAGTTAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR CCA 90 bp AACTTCAAGACAGCAATTAAAATCACGGACTGGCAGCTACCTAGGCCCCTGGGATATGCACACAGCAGGTaGGATTTGTCCATGTATATG +
Preference number: 4 (lower is better)
Translates to: NFKTAIKITDWQLPRPLGYAHSR*DLSMYM
Trigger: CATATACATGGACAAATCCCACCTGCTGTGTGCATA...TCCCAGGGGCCTAGGTAGCTGCCAGTCCGTGATTTTAATTGCTGTCTTGAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR CCA 90 bp TTGTTAACTTCAAGACAGCAATTAAAATCACGGACTGGCAGCTACCTAGGCCCCTTCAGAATCCGGCACTaGCATTTCATCCAACTCCTC +
Preference number: 4 (lower is better)
Translates to: LLTSRQQLKSRTGSYLGPFRIRH*HFIQLL
Trigger: GAGGAGTTGGATGAAATGCCAGTGCCGGATTCTGAA...GGGGCCTAGGTAGCTGCCAGTCCGTGATTTTAATTGCTGTCTTGAAGTTAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR CCA 90 bp TGCATTTGCGTGTGGTGGGCCTGGGTGACTGCACCTGTAAAGATAAGCTATCACATAACACAGACAAAATaGGGCAGGGGAACAATTAGA +
Preference number: 4 (lower is better)
Translates to: CICVWWAWVTAPVKISYHITQTK*GRGTIR
Trigger: TCTAATTGTTCCCCTGCCCCATTTTGTCTGTGTTAT...GTGATAGCTTATCTTTACAGGTGCAGTCACCCAGGCCCACCACACGCAAATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399441.4
CDS-3UTR TCA 90 bp TTGGAAATTTCCCTATCTAGTCGCTGTTGGCATGACTGTGCTTTCTCTAATGATACCGTGCATACTGCTTaGGTCAGGTGTTTGCATCCC +
Preference number: 4 (lower is better)
Translates to: LEISLSSRCWHDCAFSNDTVHTA*VRCLHP
Trigger: GGGATGCAAACACCTGACTCAAGCAGTATGCACGGT...ATCATTAGAGAAAGCACAGTCATGCCAACAGCGACTAGATAGGGAAATTTCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578091.5
ENST00000579851.5
CDS-3UTR TCA 90 bp CTATACCATGAAAGGACTCCATGCTCTAACACTACCCAGAATAATCTCCAGCCATCCTCTCTTGACTGCTaGAGGCTATTCTTAGGAACC +
Preference number: 4 (lower is better)
Translates to: LYHERTPCSNTTQNNLQPSSLDC*RLFLGT
Trigger: GGTTCCTAAGAATAGCCTTCAGCAGTCAAGAGAGGA...TGGCTGGAGATTATTCTGGGTAGTGTTAGAGCATGGAGTCCTTTCATGGTATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578091.5
ENST00000579851.5
CDS-3UTR TCA 90 bp ACACTTGTTAACTTCAAGACAGCAATTAAAATCACGGACTGGCAGCTACCTAGGGACTGCTCTAATTCATaGTGTTCAGTGGCCAGCGTC +
Preference number: 4 (lower is better)
Translates to: TLVNFKTAIKITDWQLPRDCSNS*CSVASV
Trigger: GACGCTGGCCACTGAACATCATGAATTAGAGCAGTC...CCTAGGTAGCTGCCAGTCCGTGATTTTAATTGCTGTCTTGAAGTTAACAAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR TCA 90 bp AAATTACTGCATCTTGCACTTCCCATAACAGAAGGGAGCACAGTGCCTGGTTGGACCCAGTTCTCAGCTTaGTTTTTCCCTTTGGCAAAA +
Preference number: 4 (lower is better)
Translates to: KLLHLALPITEGSTVPGWTQFSA*FFPLAK
Trigger: TTTTGCCAAAGGGAAAAATCAAGCTGAGAACTGGGT...CCAACCAGGCACTGTGCTCCCTTCTGTTATGGGAAGTGCAAGATGCAGTAATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399441.4
CDS-3UTR TCA 90 bp GCTAACAGAACCAGGAGAAGAGGCTTCTTCTCCACGAGGCTAGGATGTTCAAAGCTTTGTCTGGCTCCATaGATCTGCATGTTTTTACAT +
Preference number: 4 (lower is better)
Translates to: ANRTRRRGFFSTRLGCSKLCLAP*ICMFLH
Trigger: ATGTAAAAACATGCAGATTCATGGAGCCAGACAAAG...CTTTGAACATCCTAGCCTCGTGGAGAAGAAGCCTCTTCTCCTGGTTCTGTTAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399441.4
CDS-3UTR GCA 90 bp AAATTACTGCATCTTGCACTTCCCATAACAGAAGGGAGCACAGTGCCTGGTTGGTTACTTCTTCAGCATTaGCATTTCTGGCGTGATGGA +
Preference number: 4 (lower is better)
Translates to: KLLHLALPITEGSTVPGWLLLQH*HFWRDG
Trigger: TCCATCACGCCAGAAATGGCAATGCTGAAGAAGTAA...CCAACCAGGCACTGTGCTCCCTTCTGTTATGGGAAGTGCAAGATGCAGTAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399441.4
CDS-3UTR GCA 90 bp TTGTTAACTTCAAGACAGCAATTAAAATCACGGACTGGCAGCTACCTAGGCCCCCAACACATTCACTTCTaGACCAGCCTTCAACAGATC +
Preference number: 4 (lower is better)
Translates to: LLTSRQQLKSRTGSYLGPQHIHF*TSLQQI
Trigger: GATCTGTTGAAGGCTGGTGCAGAAGTGAATGTGTTG...GGGGCCTAGGTAGCTGCCAGTCCGTGATTTTAATTGCTGTCTTGAAGTTAACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319481.8
CDS-3UTR GCA 90 bp GAAAGTTGGAAATTTCCCTATCTAGTCGCTGTTGGCATGACTGTGCTTTCTCTAATGGGCCCGGTAAGCTaGACAATGCAAGGGTGTATT +
Preference number: 4 (lower is better)
Translates to: ESWKFPYLVAVGMTVLSLMGPVS*TMQGCI
Trigger: AATACACCCTTGCATTGTGCAGCTTACCGGGCCCAT...TAGAGAAAGCACAGTCATGCCAACAGCGACTAGATAGGGAAATTTCCAACTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578091.5
ENST00000579851.5
CDS-3UTR GCA 90 bp ACACTTGTTAACTTCAAGACAGCAATTAAAATCACGGACTGGCAGCTACCTAGGGGTTCCTTTGGGTTCTaGTTCTACACTCTTCCCCCA +
Preference number: 4 (lower is better)
Translates to: TLVNFKTAIKITDWQLPRGSFGF*FYTLPP
Trigger: TGGGGGAAGAGTGTAGAAGCAGAACCCAAAGGAACC...CCTAGGTAGCTGCCAGTCCGTGATTTTAATTGCTGTCTTGAAGTTAACAAGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR GCA 90 bp TTGTTAACTTCAAGACAGCAATTAAAATCACGGACTGGCAGCTACCTAGGCCCCCCTGTTTTTGCGGGCTaGTCTTTGTTTTTCCTCAAG +
Preference number: 4 (lower is better)
Translates to: LLTSRQQLKSRTGSYLGPPVFAG*SLFFLK
Trigger: CTTGAGGAAAAACAAAGAGCAGCCCGCAAAAACAGG...GGGGCCTAGGTAGCTGCCAGTCCGTGATTTTAATTGCTGTCTTGAAGTTAACAA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR CCA 90 bp TACCGTGCATACTGCTTGAGTCAGGTGTTTGCATCCCTGGCGATAAATATTATGTTCATTTCAGCACCCTaGGCAAGGTCAAGAGGTTTC +
Preference number: 4 (lower is better)
Translates to: YRAYCLSQVFASLAINIMFISAP*ARSRGF
Trigger: GAAACCTCTTGACCTTGCCCAGGGTGCTGAAATGAA...CATAATATTTATCGCCAGGGATGCAAACACCTGACTCAAGCAGTATGCACGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578091.5
ENST00000579851.5
CDS-3UTR CCA 90 bp AACTTCAAGACAGCAATTAAAATCACGGACTGGCAGCTACCTAGGCCCCTGGGAGTAAAATTATACATCTaGGCAGAATTTGGAGGCCGT +
Preference number: 4 (lower is better)
Translates to: NFKTAIKITDWQLPRPLGVKLYI*AEFGGR
Trigger: ACGGCCTCCAAATTCTGCCCAGATGTATAATTTTAC...TCCCAGGGGCCTAGGTAGCTGCCAGTCCGTGATTTTAATTGCTGTCTTGAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR CCA 90 bp ACACTTGTTAACTTCAAGACAGCAATTAAAATCACGGACTGGCAGCTACCTAGGAGTCCTCTTCTGACTTaGACCTGTTTTTGCGGGCTG +
Preference number: 4 (lower is better)
Translates to: TLVNFKTAIKITDWQLPRSPLLT*TCFCGL
Trigger: CAGCCCGCAAAAACAGGTCCAAGTCAGAAGAGGACT...CCTAGGTAGCTGCCAGTCCGTGATTTTAATTGCTGTCTTGAAGTTAACAAGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR CCA 90 bp AACTTCAAGACAGCAATTAAAATCACGGACTGGCAGCTACCTAGGCCCCTGGGATCTCAGTCTGGGGTTTaGGTGGATAAATACTATAAG +
Preference number: 4 (lower is better)
Translates to: NFKTAIKITDWQLPRPLGSQSGV*VDKYYK
Trigger: CTTATAGTATTTATCCACCCAAACCCCAGACTGAGA...TCCCAGGGGCCTAGGTAGCTGCCAGTCCGTGATTTTAATTGCTGTCTTGAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR CCA 90 bp ACACTTGTTAACTTCAAGACAGCAATTAAAATCACGGACTGGCAGCTACCTAGGATTAAAATCACGGACTaGCAGCTACCTAGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: TLVNFKTAIKITDWQLPRIKITD*QLPRPL
Trigger: CAGGGGCCTAGGTAGCTGCCAGTCCGTGATTTTAAT...CCTAGGTAGCTGCCAGTCCGTGATTTTAATTGCTGTCTTGAAGTTAACAAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR CCA 90 bp TGCATTTGCGTGTGGTGGGCCTGGGTGACTGCACCTGTAAAGATAAGCTATCACAATTTTTATGGTAAATaGACAAGGGCAGCAACTCCA +
Preference number: 4 (lower is better)
Translates to: CICVWWAWVTAPVKISYHNFYGK*TRAATP
Trigger: TGGAGTTGCTGCCCTTGTCCATTTACCATAAAAATT...GTGATAGCTTATCTTTACAGGTGCAGTCACCCAGGCCCACCACACGCAAATGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399441.4
CDS-3UTR CCA 90 bp GAGGCAGGTTTGCATGACCCAGTTCTCAGCTTGATTTTTCCCTTTGGCAAAATGTTTCAGGTAAGGGGGTaGGTGGGAAAAGATAGTCAT +
Preference number: 4 (lower is better)
Translates to: EAGLHDPVLSLIFPFGKMFQVRG*VGKDSH
Trigger: ATGACTATCTTTTCCCACCCACCCCCTTACCTGAAA...CATTTTGCCAAAGGGAAAAATCAAGCTGAGAACTGGGTCATGCAAACCTGCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000399441.4
CDS-3UTR TCA 90 bp AGATTAAGGCAATCAGTCAAAGCTACACAAGTTTCTCTAGAAGCTTCTGAGACATTGCCATTTCTGGCGTaGTGGAGAAGCTGTTGCTCC +
Preference number: 4 (lower is better)
Translates to: RLRQSVKATQVSLEASETLPFLA*WRSCCS
Trigger: GGAGCAACAGCTTCTCCATCACGCCAGAAATGGCAA...TGTCTCAGAAGCTTCTAGAGAAACTTGTGTAGCTTTGACTGATTGCCTTAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578091.5
ENST00000579851.5
CDS-3UTR TCA 90 bp AGGAGGAGAGTTCTAAATATGTCAAAGGTTACATCTAAAACATTCAAGCATGACGTAAAGGCAGCTCGATaGAGCGGCGTGTCTCCCATG +
Preference number: 4 (lower is better)
Translates to: RRRVLNMSKVTSKTFKHDVKAAR*SGVSPM
Trigger: CATGGGAGACACGCCGCTTCATCGAGCTGCCTTTAC...GTCATGCTTGAATGTTTTAGATGTAACCTTTGACATATTTAGAACTCTCCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319481.8
CDS-3UTR TCA 90 bp ATCCCTGGCGATAAATATTATGAACTGCATCAGGCTGTTTCCTATACCATGAAAACCGTGCATACTGCTTaGGTCAGGTGTTTGCATCCC +
Preference number: 4 (lower is better)
Translates to: IPGDKYYELHQAVSYTMKTVHTA*VRCLHP
Trigger: GGGATGCAAACACCTGACTCAAGCAGTATGCACGGT...TTTCATGGTATAGGAAACAGCCTGATGCAGTTCATAATATTTATCGCCAGGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578091.5
ENST00000579851.5
CDS-3UTR TCA 90 bp GAAAGTTGGAAATTTCCCTATCTAGTCGCTGTTGGCATGACTGTGCTTTCTCTATCCTCTCTTGACTGCTaGAGGCTATTCTTAGGAACC +
Preference number: 4 (lower is better)
Translates to: ESWKFPYLVAVGMTVLSLSSLDC*RLFLGT
Trigger: GGTTCCTAAGAATAGCCTTCAGCAGTCAAGAGAGGA...TAGAGAAAGCACAGTCATGCCAACAGCGACTAGATAGGGAAATTTCCAACTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578091.5
ENST00000579851.5
CDS-3UTR TCA 90 bp ACACTTGTTAACTTCAAGACAGCAATTAAAATCACGGACTGGCAGCTACCTAGGAACTGGCCTTGTGGATaGGGTAAGTATGCTCCATGT +
Preference number: 4 (lower is better)
Translates to: TLVNFKTAIKITDWQLPRNWPCG*GKYAPC
Trigger: ACATGGAGCATACTTACCTCATCCACAAGGCCAGTT...CCTAGGTAGCTGCCAGTCCGTGATTTTAATTGCTGTCTTGAAGTTAACAAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR TCA 90 bp TTTTTCCTAAGACTTTCATCACCAATATCGCCTTATACCCTGCTTTTGTTGGGTCACAGGATCAGAGAGTaGACTGGCCTTGTGGATGAG +
Preference number: 4 (lower is better)
Translates to: FFLRLSSPISPYTLLLLGHRIRE*TGLVDE
Trigger: CTCATCCACAAGGCCAGTTCACTCTCTGATCCTGTG...ACCCAACAAAAGCAGGGTATAAGGCGATATTGGTGATGAAAGTCTTAGGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR TCA 90 bp GTAAATATGGCAACAGCAACCATAAAAAGCATATTCCCCAGCAGTGTTCTCTTACAAGGAGCTCCAAGGTaGTGGTTCCTTTGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: VNMATATIKSIFPSSVLLQGAPR*WFLWVL
Trigger: CAGAACCCAAAGGAACCATCACCTTGGAGCTCCTTG...TAAGAGAACACTGCTGGGGAATATGCTTTTTATGGTTGCTGTTGCCATATTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR TCA 90 bp TTGTTAACTTCAAGACAGCAATTAAAATCACGGACTGGCAGCTACCTAGGCCCCACAGTTTACCCACAATaGTATTATGCACACAGCAGG +
Preference number: 4 (lower is better)
Translates to: LLTSRQQLKSRTGSYLGPTVYPQ*YYAHSR
Trigger: CCTGCTGTGTGCATAATATCATTGTGGGTAAACTGT...GGGGCCTAGGTAGCTGCCAGTCCGTGATTTTAATTGCTGTCTTGAAGTTAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR TCA 90 bp TTTTTCCTAAGACTTTCATCACCAATATCGCCTTATACCCTGCTTTTGTTGGGTCATTTTCCATGGCTCTaGTGTCAGGCCGTAACCTGC +
Preference number: 4 (lower is better)
Translates to: FFLRLSSPISPYTLLLLGHFPWL*CQAVTC
Trigger: GCAGGTTACGGCCTGACATCAGAGCCATGGAAAATG...ACCCAACAAAAGCAGGGTATAAGGCGATATTGGTGATGAAAGTCTTAGGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR TCA 90 bp AACTTCAAGACAGCAATTAAAATCACGGACTGGCAGCTACCTAGGCCCCTGGGAAAATGTCAGGCAAATTaGAGTAATTTCTGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: NFKTAIKITDWQLPRPLGKCQAN*SNFCPS
Trigger: ACTGGGACAGAAATTACTTCAATTTGCCTGACATTT...TCCCAGGGGCCTAGGTAGCTGCCAGTCCGTGATTTTAATTGCTGTCTTGAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR TCA 90 bp AACTTCAAGACAGCAATTAAAATCACGGACTGGCAGCTACCTAGGCCCCTGGGAAGTTTGATACTTACATaGGTGCAACTTACTTTCCCT +
Preference number: 4 (lower is better)
Translates to: NFKTAIKITDWQLPRPLGSLILT*VQLTFP
Trigger: AGGGAAAGTAAGTTGCACTCATGTAAGTATCAAACT...TCCCAGGGGCCTAGGTAGCTGCCAGTCCGTGATTTTAATTGCTGTCTTGAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR GCA 90 bp TTGTTAACTTCAAGACAGCAATTAAAATCACGGACTGGCAGCTACCTAGGCCCCCTTGAGTCAGGTGTTTaGATCCCTGGCGATAAATAT +
Preference number: 4 (lower is better)
Translates to: LLTSRQQLKSRTGSYLGPLESGV*IPGDKY
Trigger: ATATTTATCGCCAGGGATGCAAACACCTGACTCAAG...GGGGCCTAGGTAGCTGCCAGTCCGTGATTTTAATTGCTGTCTTGAAGTTAACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319481.8
CDS-3UTR GCA 90 bp CTGGGAACAGTAGTGAGTGCTGTAAGCAGAATGTTCTTCTATTGCTTCCAGCCAGGGAACAGTAGTGAGTaGTGTAAGCAGAATGTTCTT +
Preference number: 4 (lower is better)
Translates to: LGTVVSAVSRMFFYCFQPGNSSE*CKQNVL
Trigger: AAGAACATTCTGCTTACAGCACTCACTACTGTTCCC...TGGCTGGAAGCAATAGAAGAACATTCTGCTTACAGCACTCACTACTGTTCCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578091.5
ENST00000579851.5
CDS-3UTR GCA 90 bp GTAAATATGGCAACAGCAACCATAAAAAGCATATTCCCCAGCAGTGTTCTCTTAGGAGCGTGCTGTCACTaGTTCCAATCTACTCAGGGA +
Preference number: 4 (lower is better)
Translates to: VNMATATIKSIFPSSVLLGACCH*FQSTQG
Trigger: TCCCTGAGTAGATTGGAAGCAGTGACAGCACGCTCC...TAAGAGAACACTGCTGGGGAATATGCTTTTTATGGTTGCTGTTGCCATATTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR GCA 90 bp TTCTTCGGACATTCTGTGTTTTCTACTGCCCAAATGCTCTCCTTCCTCTTCAAACTCTTCAAAGGAGCGTaGTGTCACTGCTTCCAATCT +
Preference number: 4 (lower is better)
Translates to: FFGHSVFSTAQMLSFLFKLFKGA*CHCFQS
Trigger: AGATTGGAAGCAGTGACAGCACGCTCCTTTGAAGAG...TTTGAAGAGGAAGGAGAGCATTTGGGCAGTAGAAAACACAGAATGTCCGAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584119.1
CDS-3UTR GCA 90 bp ACACTTGTTAACTTCAAGACAGCAATTAAAATCACGGACTGGCAGCTACCTAGGTTCTGTCCCAGTAGCTaGCAGAGTAAATCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: TLVNFKTAIKITDWQLPRFCPSS*QSKSSP
Trigger: AGGACTGGATTTACTCTGGCAGCTACTGGGACAGAA...CCTAGGTAGCTGCCAGTCCGTGATTTTAATTGCTGTCTTGAAGTTAACAAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR CCA 90 bp AGGAGGAGAGTTCTAAATATGTCAAAGGTTACATCTAAAACATTCAAGCATGACCCCACGTCGAGGAAGTaGTCGTCACCAACTCTGGCT +
Preference number: 4 (lower is better)
Translates to: RRRVLNMSKVTSKTFKHDPTSRK*SSPTLA
Trigger: AGCCAGAGTTGGTGACGACCACTTCCTCGACGTGGG...GTCATGCTTGAATGTTTTAGATGTAACCTTTGACATATTTAGAACTCTCCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319481.8
CDS-3UTR CCA 90 bp ACACTTGTTAACTTCAAGACAGCAATTAAAATCACGGACTGGCAGCTACCTAGGTTCATTTCAGCACCCTaGGCAAGGTCAAGAGGTTTC +
Preference number: 4 (lower is better)
Translates to: TLVNFKTAIKITDWQLPRFISAP*ARSRGF
Trigger: GAAACCTCTTGACCTTGCCCAGGGTGCTGAAATGAA...CCTAGGTAGCTGCCAGTCCGTGATTTTAATTGCTGTCTTGAAGTTAACAAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319481.8
CDS-3UTR CCA 90 bp TTCTCTAATGATTTCTTCAGGTCTGCAGCAGAAACCGTATCTTCCTCCTCCTCAAGAGGCAGCTATCAGTaGATTTTACCGTGCATACTG +
Preference number: 4 (lower is better)
Translates to: FSNDFFRSAAETVSSSSSRGSYQ*ILPCIL
Trigger: CAGTATGCACGGTAAAATCCACTGATAGCTGCCTCT...TGAGGAGGAGGAAGATACGGTTTCTGCTGCAGACCTGAAGAAATCATTAGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578091.5
ENST00000579851.5
CDS-3UTR CCA 90 bp CTATACCATGAAAGGACTCCATGCTCTAACACTACCCAGAATAATCTCCAGCCACTATCTAGTCGCTGTTaGCATGACTGTGCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: LYHERTPCSNTTQNNLQPLSSRC*HDCAFS
Trigger: AGAGAAAGCACAGTCATGCCAACAGCGACTAGATAG...TGGCTGGAGATTATTCTGGGTAGTGTTAGAGCATGGAGTCCTTTCATGGTATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578091.5
ENST00000579851.5
CDS-3UTR CCA 90 bp TTTTTCTTCGGACATTCTGTGTTTTCTACTGCCCAAATGCTCTCCTTCCTCTTCATTCATGATGTTCAGTaGCCAGCGTCTCCAGTGCTT +
Preference number: 4 (lower is better)
Translates to: FFFGHSVFSTAQMLSFLFIHDVQ*PASPVL
Trigger: AAGCACTGGAGACGCTGGCCACTGAACATCATGAAT...GAAGAGGAAGGAGAGCATTTGGGCAGTAGAAAACACAGAATGTCCGAAGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584119.1
CDS-3UTR CCA 90 bp ACACTTGTTAACTTCAAGACAGCAATTAAAATCACGGACTGGCAGCTACCTAGGATGAAATGCACTGATTaGTGGGTGATGGCTGACCTG +
Preference number: 4 (lower is better)
Translates to: TLVNFKTAIKITDWQLPRMKCTD*WVMADL
Trigger: CAGGTCAGCCATCACCCACCAATCAGTGCATTTCAT...CCTAGGTAGCTGCCAGTCCGTGATTTTAATTGCTGTCTTGAAGTTAACAAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR CCA 90 bp TTGTTAACTTCAAGACAGCAATTAAAATCACGGACTGGCAGCTACCTAGGCCCCAGTGGCATTTGCCACTaGAAGTGGAAGCATTTAACA +
Preference number: 4 (lower is better)
Translates to: LLTSRQQLKSRTGSYLGPSGICH*KWKHLT
Trigger: TGTTAAATGCTTCCACTTCCAGTGGCAAATGCCACT...GGGGCCTAGGTAGCTGCCAGTCCGTGATTTTAATTGCTGTCTTGAAGTTAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR CCA 90 bp ATTTCCACATTGCCATACTGTTCGATCCACAGTTTACCCACAATGATATTATGCTTAAAATTCCTCACCTaGGCCAGATCCGAGGACCCC +
Preference number: 4 (lower is better)
Translates to: ISTLPYCSIHSLPTMILCLKFLT*ARSEDP
Trigger: GGGGTCCTCGGATCTGGCCCAGGTGAGGAATTTTAA...GCATAATATCATTGTGGGTAAACTGTGGATCGAACAGTATGGCAATGTGGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578055.5
CDS-3UTR TCA 90 bp AGATTAAGGCAATCAGTCAAAGCTACACAAGTTTCTCTAGAAGCTTCTGAGACAGGAACCCGGAAGCCATaGATGGTGTCATCAAAGCAT +
Preference number: 4 (lower is better)
Translates to: RLRQSVKATQVSLEASETGTRKP*MVSSKH
Trigger: ATGCTTTGATGACACCATTCATGGCTTCCGGGTTCC...TGTCTCAGAAGCTTCTAGAGAAACTTGTGTAGCTTTGACTGATTGCCTTAATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578091.5
ENST00000579851.5
CDS-3UTR TCA 90 bp CCATACTGTTCGATCCACAGTTTACCCACAATGATATTATGCACACAGCAGGTGTTGTTCTGTGTTTCTTaGTGCCATTGGAGAGAGCAT +
Preference number: 4 (lower is better)
Translates to: PYCSIHSLPTMILCTQQVLFCVS*CHWREH
Trigger: ATGCTCTCTCCAATGGCATCAAGAAACACAGAACAA...CACCTGCTGTGTGCATAATATCATTGTGGGTAAACTGTGGATCGAACAGTATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578055.5
CDS-3UTR GCA 90 bp CTATACCATGAAAGGACTCCATGCTCTAACACTACCCAGAATAATCTCCAGCCACTTGAGTCAGGTGTTTaGATCCCTGGCGATAAATAT +
Preference number: 4 (lower is better)
Translates to: LYHERTPCSNTTQNNLQPLESGV*IPGDKY
Trigger: ATATTTATCGCCAGGGATGCAAACACCTGACTCAAG...TGGCTGGAGATTATTCTGGGTAGTGTTAGAGCATGGAGTCCTTTCATGGTATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578091.5
ENST00000579851.5
CDS-3UTR GCA 90 bp ACACTTGTTAACTTCAAGACAGCAATTAAAATCACGGACTGGCAGCTACCTAGGCAGTGGATTTTACCGTaGATACTGCTTGAGTCAGGT +
Preference number: 4 (lower is better)
Translates to: TLVNFKTAIKITDWQLPRQWILP*ILLESG
Trigger: ACCTGACTCAAGCAGTATGCACGGTAAAATCCACTG...CCTAGGTAGCTGCCAGTCCGTGATTTTAATTGCTGTCTTGAAGTTAACAAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319481.8
CDS-3UTR GCA 90 bp GAGTCAGGTGTTTGCATCCCTGGCGATAAATATTATGAACTGCATCAGGCTGTTAGAATGTTCTTCTATTaGTTCCAGCCAGTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: ESGVCIPGDKYYELHQAVRMFFY*FQPVLS
Trigger: AGAGAGGACTGGCTGGAAGCAATAGAAGAACATTCT...AACAGCCTGATGCAGTTCATAATATTTATCGCCAGGGATGCAAACACCTGACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578091.5
ENST00000579851.5
CDS-3UTR GCA 90 bp TACCGTGCATACTGCTTGAGTCAGGTGTTTGCATCCCTGGCGATAAATATTATGGGGAACAGTAGTGAGTaGTGTAAGCAGAATGTTCTT +
Preference number: 4 (lower is better)
Translates to: YRAYCLSQVFASLAINIMGNSSE*CKQNVL
Trigger: AAGAACATTCTGCTTACAGCACTCACTACTGTTCCC...CATAATATTTATCGCCAGGGATGCAAACACCTGACTCAAGCAGTATGCACGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578091.5
ENST00000579851.5
CDS-3UTR GCA 90 bp AACTTCAAGACAGCAATTAAAATCACGGACTGGCAGCTACCTAGGCCCCTGGGACACAGAGCTTCTTTTTaGTTTTATCTTGAATGTAGC +
Preference number: 4 (lower is better)
Translates to: NFKTAIKITDWQLPRPLGHRASF*FYLECS
Trigger: GCTACATTCAAGATAAAAGCAAAAAGAAGCTCTGTG...TCCCAGGGGCCTAGGTAGCTGCCAGTCCGTGATTTTAATTGCTGTCTTGAAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR GCA 90 bp ACACTTGTTAACTTCAAGACAGCAATTAAAATCACGGACTGGCAGCTACCTAGGCCTGTTTTTGCGGGCTaGTCTTTGTTTTTCCTCAAG +
Preference number: 4 (lower is better)
Translates to: TLVNFKTAIKITDWQLPRPVFAG*SLFFLK
Trigger: CTTGAGGAAAAACAAAGAGCAGCCCGCAAAAACAGG...CCTAGGTAGCTGCCAGTCCGTGATTTTAATTGCTGTCTTGAAGTTAACAAGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR CCA 90 bp TTGTTAACTTCAAGACAGCAATTAAAATCACGGACTGGCAGCTACCTAGGCCCCCTTCATTCCTCGCCATaGTCTCTAATAGTTGTCTTA +
Preference number: 4 (lower is better)
Translates to: LLTSRQQLKSRTGSYLGPLHSSP*SLIVVL
Trigger: TAAGACAACTATTAGAGACCATGGCGAGGAATGAAG...GGGGCCTAGGTAGCTGCCAGTCCGTGATTTTAATTGCTGTCTTGAAGTTAACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319481.8
CDS-3UTR CCA 90 bp GAGGCAGGTTTGCATGACCCAGTTCTCAGCTTGATTTTTCCCTTTGGCAAAATGCTTCATTCCTCGCCATaGTCTCTAATAGTTGTCTTA +
Preference number: 4 (lower is better)
Translates to: EAGLHDPVLSLIFPFGKMLHSSP*SLIVVL
Trigger: TAAGACAACTATTAGAGACCATGGCGAGGAATGAAG...CATTTTGCCAAAGGGAAAAATCAAGCTGAGAACTGGGTCATGCAAACCTGCCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399441.4
CDS-3UTR CCA 90 bp TTGGAAATTTCCCTATCTAGTCGCTGTTGGCATGACTGTGCTTTCTCTAATGATTTCATTTCAGCACCCTaGGCAAGGTCAAGAGGTTTC +
Preference number: 4 (lower is better)
Translates to: LEISLSSRCWHDCAFSNDFISAP*ARSRGF
Trigger: GAAACCTCTTGACCTTGCCCAGGGTGCTGAAATGAA...ATCATTAGAGAAAGCACAGTCATGCCAACAGCGACTAGATAGGGAAATTTCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578091.5
ENST00000579851.5
CDS-3UTR CCA 90 bp ACACTTGTTAACTTCAAGACAGCAATTAAAATCACGGACTGGCAGCTACCTAGGCTATCTAGTCGCTGTTaGCATGACTGTGCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: TLVNFKTAIKITDWQLPRLSSRC*HDCAFS
Trigger: AGAGAAAGCACAGTCATGCCAACAGCGACTAGATAG...CCTAGGTAGCTGCCAGTCCGTGATTTTAATTGCTGTCTTGAAGTTAACAAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319481.8
CDS-3UTR CCA 90 bp GTAAATATGGCAACAGCAACCATAAAAAGCATATTCCCCAGCAGTGTTCTCTTAAGTCCTCTTCTGACTTaGACCTGTTTTTGCGGGCTG +
Preference number: 4 (lower is better)
Translates to: VNMATATIKSIFPSSVLLSPLLT*TCFCGL
Trigger: CAGCCCGCAAAAACAGGTCCAAGTCAGAAGAGGACT...TAAGAGAACACTGCTGGGGAATATGCTTTTTATGGTTGCTGTTGCCATATTTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR CCA 90 bp ACCACAGTCTTTTTCTTCGGACATTCTGTGTTTTCTACTGCCCAAATGCTCTCCCTATCTAGTCGCTGTTaGCATGACTGTGCTTTCTAT +
Preference number: 4 (lower is better)
Translates to: TTVFFFGHSVFSTAQMLSLSSRC*HDCAFY
Trigger: ATAGAAAGCACAGTCATGCCAACAGCGACTAGATAG...GGAGAGCATTTGGGCAGTAGAAAACACAGAATGTCCGAAGAAAAAGACTGTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584119.1
CDS-3UTR TCA 90 bp ACACTTGTTAACTTCAAGACAGCAATTAAAATCACGGACTGGCAGCTACCTAGGTTGTTCTGTGTTTCTTaGTGCCATTGGAGAGAGCAT +
Preference number: 4 (lower is better)
Translates to: TLVNFKTAIKITDWQLPRLFCVS*CHWREH
Trigger: ATGCTCTCTCCAATGGCATCAAGAAACACAGAACAA...CCTAGGTAGCTGCCAGTCCGTGATTTTAATTGCTGTCTTGAAGTTAACAAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR TCA 90 bp AGGAGGAGAGTTCTAAATATGTCAAAGGTTACATCTAAAACATTCAAGCATGACCTCCCAGCAGTGGGTTaGAAGGTTTTCCAGTCCGTT +
Preference number: 4 (lower is better)
Translates to: RRRVLNMSKVTSKTFKHDLPAVG*KVFQSV
Trigger: AACGGACTGGAAAACCTTTCAACCCACTGCTGGGAG...GTCATGCTTGAATGTTTTAGATGTAACCTTTGACATATTTAGAACTCTCCTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR GCA 90 bp GAAAGTTGGAAATTTCCCTATCTAGTCGCTGTTGGCATGACTGTGCTTTCTCTATTACTTCTTCAGCATTaGCATTTCTGGCGTGATGGA +
Preference number: 4 (lower is better)
Translates to: ESWKFPYLVAVGMTVLSLLLLQH*HFWRDG
Trigger: TCCATCACGCCAGAAATGGCAATGCTGAAGAAGTAA...TAGAGAAAGCACAGTCATGCCAACAGCGACTAGATAGGGAAATTTCCAACTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578091.5
ENST00000579851.5
CDS-3UTR GCA 90 bp TGTTGGCATGACTGTGCTTTCTCTAATGATTTCTTCAGGTCTGCAGCAGAAACCATGAGTAACTTCTTTTaGTGTCTGTCCACTCCCATT +
Preference number: 4 (lower is better)
Translates to: CWHDCAFSNDFFRSAAETMSNFF*CLSTPI
Trigger: AATGGGAGTGGACAGACAGCAAAAGAAGTTACTCAT...GGTTTCTGCTGCAGACCTGAAGAAATCATTAGAGAAAGCACAGTCATGCCAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578091.5
ENST00000579851.5
CDS-3UTR GCA 90 bp TATGAACTGCATCAGGCTGTTTCCTATACCATGAAAGGACTCCATGCTCTAACACATGAAAGGACTCCATaGTCTAACACTACCCAGAAT +
Preference number: 4 (lower is better)
Translates to: YELHQAVSYTMKGLHALTHERTP*SNTTQN
Trigger: ATTCTGGGTAGTGTTAGAGCATGGAGTCCTTTCATG...TGTTAGAGCATGGAGTCCTTTCATGGTATAGGAAACAGCCTGATGCAGTTCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578091.5
ENST00000579851.5
CDS-3UTR GCA 90 bp TATGAACTGCATCAGGCTGTTTCCTATACCATGAAAGGACTCCATGCTCTAACATTTTACCGTGCATACTaGTTGAGTCAGGTGTTTGCA +
Preference number: 4 (lower is better)
Translates to: YELHQAVSYTMKGLHALTFYRAY*LSQVFA
Trigger: TGCAAACACCTGACTCAAGCAGTATGCACGGTAAAA...TGTTAGAGCATGGAGTCCTTTCATGGTATAGGAAACAGCCTGATGCAGTTCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578091.5
ENST00000579851.5
CDS-3UTR GCA 90 bp TTTTTCCTAAGACTTTCATCACCAATATCGCCTTATACCCTGCTTTTGTTGGGTCTCTTCAAAGGAGCGTaGTGTCACTGCTTCCAATCT +
Preference number: 4 (lower is better)
Translates to: FFLRLSSPISPYTLLLLGLFKGA*CHCFQS
Trigger: AGATTGGAAGCAGTGACAGCACGCTCCTTTGAAGAG...ACCCAACAAAAGCAGGGTATAAGGCGATATTGGTGATGAAAGTCTTAGGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR GCA 90 bp ACACTTGTTAACTTCAAGACAGCAATTAAAATCACGGACTGGCAGCTACCTAGGTTCTGTGTTTTCTACTaGCCAAATGCTCTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: TLVNFKTAIKITDWQLPRFCVFY*PNALLP
Trigger: AGGAAGGAGAGCATTTGGGCAGTAGAAAACACAGAA...CCTAGGTAGCTGCCAGTCCGTGATTTTAATTGCTGTCTTGAAGTTAACAAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR GCA 90 bp ACACTTGTTAACTTCAAGACAGCAATTAAAATCACGGACTGGCAGCTACCTAGGAGGTGCTCATCTGTTTaGTGTTCTTCTTCTCTTCTG +
Preference number: 4 (lower is better)
Translates to: TLVNFKTAIKITDWQLPRRCSSV*CSSSLL
Trigger: CAGAAGAGAAGAAGAACAGCAAACAGATGAGCACCT...CCTAGGTAGCTGCCAGTCCGTGATTTTAATTGCTGTCTTGAAGTTAACAAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR GCA 90 bp ACACTTGTTAACTTCAAGACAGCAATTAAAATCACGGACTGGCAGCTACCTAGGTATCGCCTTATACCCTaGTTTTGTTGGGTGAAATGC +
Preference number: 4 (lower is better)
Translates to: TLVNFKTAIKITDWQLPRYRLIP*FCWVKC
Trigger: GCATTTCACCCAACAAAAGCAGGGTATAAGGCGATA...CCTAGGTAGCTGCCAGTCCGTGATTTTAATTGCTGTCTTGAAGTTAACAAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR CCA 90 bp GAGTCAGGTGTTTGCATCCCTGGCGATAAATATTATGAACTGCATCAGGCTGTTCTTCATTCCTCGCCATaGTCTCTAATAGTTGTCTTA +
Preference number: 4 (lower is better)
Translates to: ESGVCIPGDKYYELHQAVLHSSP*SLIVVL
Trigger: TAAGACAACTATTAGAGACCATGGCGAGGAATGAAG...AACAGCCTGATGCAGTTCATAATATTTATCGCCAGGGATGCAAACACCTGACTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578091.5
ENST00000579851.5
CDS-3UTR CCA 90 bp TGTTGGCATGACTGTGCTTTCTCTAATGATTTCTTCAGGTCTGCAGCAGAAACCCTTCATTCCTCGCCATaGTCTCTAATAGTTGTCTTA +
Preference number: 4 (lower is better)
Translates to: CWHDCAFSNDFFRSAAETLHSSP*SLIVVL
Trigger: TAAGACAACTATTAGAGACCATGGCGAGGAATGAAG...GGTTTCTGCTGCAGACCTGAAGAAATCATTAGAGAAAGCACAGTCATGCCAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578091.5
ENST00000579851.5
CDS-3UTR CCA 90 bp TTGGAAATTTCCCTATCTAGTCGCTGTTGGCATGACTGTGCTTTCTCTAATGATCTATCTAGTCGCTGTTaGCATGACTGTGCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: LEISLSSRCWHDCAFSNDLSSRC*HDCAFS
Trigger: AGAGAAAGCACAGTCATGCCAACAGCGACTAGATAG...ATCATTAGAGAAAGCACAGTCATGCCAACAGCGACTAGATAGGGAAATTTCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578091.5
ENST00000579851.5
CDS-3UTR CCA 90 bp TTTTTCCTAAGACTTTCATCACCAATATCGCCTTATACCCTGCTTTTGTTGGGTATTCATGATGTTCAGTaGCCAGCGTCTCCAGTGCTT +
Preference number: 4 (lower is better)
Translates to: FFLRLSSPISPYTLLLLGIHDVQ*PASPVL
Trigger: AAGCACTGGAGACGCTGGCCACTGAACATCATGAAT...ACCCAACAAAAGCAGGGTATAAGGCGATATTGGTGATGAAAGTCTTAGGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR CCA 90 bp ACACTTGTTAACTTCAAGACAGCAATTAAAATCACGGACTGGCAGCTACCTAGGTATGCACACAGCAGGTaGGATTTGTCCATGTATATG +
Preference number: 4 (lower is better)
Translates to: TLVNFKTAIKITDWQLPRYAHSR*DLSMYM
Trigger: CATATACATGGACAAATCCCACCTGCTGTGTGCATA...CCTAGGTAGCTGCCAGTCCGTGATTTTAATTGCTGTCTTGAAGTTAACAAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR CCA 90 bp TTTTTCCTAAGACTTTCATCACCAATATCGCCTTATACCCTGCTTTTGTTGGGTTTCAGAATCCGGCACTaGCATTTCATCCAACTCCTC +
Preference number: 4 (lower is better)
Translates to: FFLRLSSPISPYTLLLLGFRIRH*HFIQLL
Trigger: GAGGAGTTGGATGAAATGCCAGTGCCGGATTCTGAA...ACCCAACAAAAGCAGGGTATAAGGCGATATTGGTGATGAAAGTCTTAGGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR CCA 90 bp TTTTTCCTAAGACTTTCATCACCAATATCGCCTTATACCCTGCTTTTGTTGGGTACCTGCAGTCTGTCTTaGGAATCACACTCTCCATGT +
Preference number: 4 (lower is better)
Translates to: FFLRLSSPISPYTLLLLGTCSLS*ESHSPC
Trigger: ACATGGAGAGTGTGATTCCCAAGACAGACTGCAGGT...ACCCAACAAAAGCAGGGTATAAGGCGATATTGGTGATGAAAGTCTTAGGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
3UTR CAA 72 bp CATTTGTCCCCAGTCTTGTGGTTTATAATTTCCACATaGCCATACTGTTCGATCCACAGTTTACCCACAATG +
Preference number: 4 (lower is better)
Translates to: HLSPVLWFIIST*PYCSIHSLPTM
Trigger: CATTGTGGGTAAACTGTGGATCGAACAGTATGGCAATGTGGAAATTATAAACCACAAGACTGGGGACAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578055.5
CDS-3UTR TCA 90 bp ACACTTGTTAACTTCAAGACAGCAATTAAAATCACGGACTGGCAGCTACCTAGGGGTGTATTTCCTAACTaGTCCGAACAGTTAACATCA +
Preference number: 4 (lower is better)
Translates to: TLVNFKTAIKITDWQLPRGVFPN*SEQLTS
Trigger: TGATGTTAACTGTTCGGATCAGTTAGGAAATACACC...CCTAGGTAGCTGCCAGTCCGTGATTTTAATTGCTGTCTTGAAGTTAACAAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319481.8
CDS-3UTR TCA 90 bp AGGAGGAGAGTTCTAAATATGTCAAAGGTTACATCTAAAACATTCAAGCATGACCTTCCAGTCCTCTTCTaGCTTGGACCTGTTTTTGCG +
Preference number: 4 (lower is better)
Translates to: RRRVLNMSKVTSKTFKHDLPVLF*LGPVFA
Trigger: CGCAAAAACAGGTCCAAGTCAGAAGAGGACTGGAAG...GTCATGCTTGAATGTTTTAGATGTAACCTTTGACATATTTAGAACTCTCCTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR GCA 90 bp AGGAGGAGAGTTCTAAATATGTCAAAGGTTACATCTAAAACATTCAAGCATGACATGGGCCCGGTAAGCTaGACAATGCAAGGGTGTATT +
Preference number: 4 (lower is better)
Translates to: RRRVLNMSKVTSKTFKHDMGPVS*TMQGCI
Trigger: AATACACCCTTGCATTGTGCAGCTTACCGGGCCCAT...GTCATGCTTGAATGTTTTAGATGTAACCTTTGACATATTTAGAACTCTCCTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319481.8
CDS-3UTR GCA 90 bp GTGTTTGCATCCCTGGCGATAAATATTATGAACTGCATCAGGCTGTTTCCTATATTTTACCGTGCATACTaGTTGAGTCAGGTGTTTGCA +
Preference number: 4 (lower is better)
Translates to: VFASLAINIMNCIRLFPIFYRAY*LSQVFA
Trigger: TGCAAACACCTGACTCAAGCAGTATGCACGGTAAAA...TATAGGAAACAGCCTGATGCAGTTCATAATATTTATCGCCAGGGATGCAAACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578091.5
ENST00000579851.5
CDS-3UTR GCA 90 bp ATCCCTGGCGATAAATATTATGAACTGCATCAGGCTGTTTCCTATACCATGAAACAGTGGATTTTACCGTaGATACTGCTTGAGTCAGGT +
Preference number: 4 (lower is better)
Translates to: IPGDKYYELHQAVSYTMKQWILP*ILLESG
Trigger: ACCTGACTCAAGCAGTATGCACGGTAAAATCCACTG...TTTCATGGTATAGGAAACAGCCTGATGCAGTTCATAATATTTATCGCCAGGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578091.5
ENST00000579851.5
CDS-3UTR GCA 90 bp GTGTTTGCATCCCTGGCGATAAATATTATGAACTGCATCAGGCTGTTTCCTATAAGAATGTTCTTCTATTaGTTCCAGCCAGTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: VFASLAINIMNCIRLFPIRMFFY*FQPVLS
Trigger: AGAGAGGACTGGCTGGAAGCAATAGAAGAACATTCT...TATAGGAAACAGCCTGATGCAGTTCATAATATTTATCGCCAGGGATGCAAACAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578091.5
ENST00000579851.5
CDS-3UTR GCA 90 bp AATTTCCACATTGCCATACTGTTCGATCCACAGTTTACCCACAATGATATTATGCTCTTCAAAGGAGCGTaGTGTCACTGCTTCCAATCT +
Preference number: 4 (lower is better)
Translates to: NFHIAILFDPQFTHNDIMLFKGA*CHCFQS
Trigger: AGATTGGAAGCAGTGACAGCACGCTCCTTTGAAGAG...CATAATATCATTGTGGGTAAACTGTGGATCGAACAGTATGGCAATGTGGAAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578055.5
CDS-3UTR GCA 90 bp TTTTTCCTAAGACTTTCATCACCAATATCGCCTTATACCCTGCTTTTGTTGGGTTCCTTCAGCATGAAATaGACTGATTGGTGGGTGATG +
Preference number: 4 (lower is better)
Translates to: FFLRLSSPISPYTLLLLGSFSMK*TDWWVM
Trigger: CATCACCCACCAATCAGTGCATTTCATGCTGAAGGA...ACCCAACAAAAGCAGGGTATAAGGCGATATTGGTGATGAAAGTCTTAGGAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR GCA 90 bp AGGAGGAGAGTTCTAAATATGTCAAAGGTTACATCTAAAACATTCAAGCATGACTGTCAGGCCGTAACCTaGAGTCTGTCTTGGGAATCA +
Preference number: 4 (lower is better)
Translates to: RRRVLNMSKVTSKTFKHDCQAVT*SLSWES
Trigger: TGATTCCCAAGACAGACTGCAGGTTACGGCCTGACA...GTCATGCTTGAATGTTTTAGATGTAACCTTTGACATATTTAGAACTCTCCTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR CCA 90 bp AGATTAAGGCAATCAGTCAAAGCTACACAAGTTTCTCTAGAAGCTTCTGAGACAAGAGGCAGCTATCAGTaGATTTTACCGTGCATACTG +
Preference number: 4 (lower is better)
Translates to: RLRQSVKATQVSLEASETRGSYQ*ILPCIL
Trigger: CAGTATGCACGGTAAAATCCACTGATAGCTGCCTCT...TGTCTCAGAAGCTTCTAGAGAAACTTGTGTAGCTTTGACTGATTGCCTTAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578091.5
ENST00000579851.5
CDS-3UTR CCA 90 bp AATTTCCACATTGCCATACTGTTCGATCCACAGTTTACCCACAATGATATTATGATTCATGATGTTCAGTaGCCAGCGTCTCCAGTGCTT +
Preference number: 4 (lower is better)
Translates to: NFHIAILFDPQFTHNDIMIHDVQ*PASPVL
Trigger: AAGCACTGGAGACGCTGGCCACTGAACATCATGAAT...CATAATATCATTGTGGGTAAACTGTGGATCGAACAGTATGGCAATGTGGAAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578055.5
CDS-3UTR CCA 90 bp GTAAATATGGCAACAGCAACCATAAAAAGCATATTCCCCAGCAGTGTTCTCTTATGTAAGCGTCAAACGTaGCAGGGTCAACACTGTATA +
Preference number: 4 (lower is better)
Translates to: VNMATATIKSIFPSSVLLCKRQT*QGQHCI
Trigger: TATACAGTGTTGACCCTGCCACGTTTGACGCTTACA...TAAGAGAACACTGCTGGGGAATATGCTTTTTATGGTTGCTGTTGCCATATTTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR CCA 90 bp AGGAGGAGAGTTCTAAATATGTCAAAGGTTACATCTAAAACATTCAAGCATGACATTAAAATCACGGACTaGCAGCTACCTAGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: RRRVLNMSKVTSKTFKHDIKITD*QLPRPL
Trigger: CAGGGGCCTAGGTAGCTGCCAGTCCGTGATTTTAAT...GTCATGCTTGAATGTTTTAGATGTAACCTTTGACATATTTAGAACTCTCCTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR TCA 90 bp AGGAGGAGAGTTCTAAATATGTCAAAGGTTACATCTAAAACATTCAAGCATGACTCCTCTCTTGACTGCTaGAGGCTATTCTTAGGAACC +
Preference number: 4 (lower is better)
Translates to: RRRVLNMSKVTSKTFKHDSSLDC*RLFLGT
Trigger: GGTTCCTAAGAATAGCCTTCAGCAGTCAAGAGAGGA...GTCATGCTTGAATGTTTTAGATGTAACCTTTGACATATTTAGAACTCTCCTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319481.8
CDS-3UTR TCA 90 bp AGGAGGAGAGTTCTAAATATGTCAAAGGTTACATCTAAAACATTCAAGCATGACAACTGGCCTTGTGGATaGGGTAAGTATGCTCCATGT +
Preference number: 4 (lower is better)
Translates to: RRRVLNMSKVTSKTFKHDNWPCG*GKYAPC
Trigger: ACATGGAGCATACTTACCTCATCCACAAGGCCAGTT...GTCATGCTTGAATGTTTTAGATGTAACCTTTGACATATTTAGAACTCTCCTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR TCA 90 bp GTAAATATGGCAACAGCAACCATAAAAAGCATATTCCCCAGCAGTGTTCTCTTATTTAATCCTTCAGCATaGAATGCACTGATTGGTGGG +
Preference number: 4 (lower is better)
Translates to: VNMATATIKSIFPSSVLLFNPSA*NALIGG
Trigger: CCCACCAATCAGTGCATTTCATGCTGAAGGATTAAA...TAAGAGAACACTGCTGGGGAATATGCTTTTTATGGTTGCTGTTGCCATATTTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR TCA 90 bp TTTTTCCTAAGACTTTCATCACCAATATCGCCTTATACCCTGCTTTTGTTGGGTTTTAATCCTTCAGCATaGAATGCACTGATTGGTGGG +
Preference number: 4 (lower is better)
Translates to: FFLRLSSPISPYTLLLLGFNPSA*NALIGG
Trigger: CCCACCAATCAGTGCATTTCATGCTGAAGGATTAAA...ACCCAACAAAAGCAGGGTATAAGGCGATATTGGTGATGAAAGTCTTAGGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR TCA 90 bp ATTTCCACATTGCCATACTGTTCGATCCACAGTTTACCCACAATGATATTATGCACAGTTTACCCACAATaGTATTATGCACACAGCAGG +
Preference number: 4 (lower is better)
Translates to: ISTLPYCSIHSLPTMILCTVYPQ*YYAHSR
Trigger: CCTGCTGTGTGCATAATATCATTGTGGGTAAACTGT...GCATAATATCATTGTGGGTAAACTGTGGATCGAACAGTATGGCAATGTGGAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578055.5
CDS-3UTR TCA 90 bp TTTTCTTCGGACATTCTGTGTTTTCTACTGCCCAAATGCTCTCCTTCCTCTTCATTTCATCATTACGAATaGCATGTCATACAGGCAATC +
Preference number: 4 (lower is better)
Translates to: FSSDILCFLLPKCSPSSSFHHYE*HVIQAI
Trigger: GATTGCCTGTATGACATGTCATTCGTAATGATGAAA...TGAAGAGGAAGGAGAGCATTTGGGCAGTAGAAAACACAGAATGTCCGAAGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584119.1
CDS-3UTR GCA 90 bp TTTTTCCTAAGACTTTCATCACCAATATCGCCTTATACCCTGCTTTTGTTGGGTTTACTTCTTCAGCATTaGCATTTCTGGCGTGATGGA +
Preference number: 4 (lower is better)
Translates to: FFLRLSSPISPYTLLLLGLLLQH*HFWRDG
Trigger: TCCATCACGCCAGAAATGGCAATGCTGAAGAAGTAA...ACCCAACAAAAGCAGGGTATAAGGCGATATTGGTGATGAAAGTCTTAGGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319481.8
CDS-3UTR GCA 90 bp ATCCCTGGCGATAAATATTATGAACTGCATCAGGCTGTTTCCTATACCATGAAATTACTTCTTCAGCATTaGCATTTCTGGCGTGATGGA +
Preference number: 4 (lower is better)
Translates to: IPGDKYYELHQAVSYTMKLLLQH*HFWRDG
Trigger: TCCATCACGCCAGAAATGGCAATGCTGAAGAAGTAA...TTTCATGGTATAGGAAACAGCCTGATGCAGTTCATAATATTTATCGCCAGGGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578091.5
ENST00000579851.5
CDS-3UTR GCA 90 bp GTGTTTGCATCCCTGGCGATAAATATTATGAACTGCATCAGGCTGTTTCCTATAATGAGTAACTTCTTTTaGTGTCTGTCCACTCCCATT +
Preference number: 4 (lower is better)
Translates to: VFASLAINIMNCIRLFPIMSNFF*CLSTPI
Trigger: AATGGGAGTGGACAGACAGCAAAAGAAGTTACTCAT...TATAGGAAACAGCCTGATGCAGTTCATAATATTTATCGCCAGGGATGCAAACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578091.5
ENST00000579851.5
CDS-3UTR GCA 90 bp AGATTAAGGCAATCAGTCAAAGCTACACAAGTTTCTCTAGAAGCTTCTGAGACACATGAAAGGACTCCATaGTCTAACACTACCCAGAAT +
Preference number: 4 (lower is better)
Translates to: RLRQSVKATQVSLEASETHERTP*SNTTQN
Trigger: ATTCTGGGTAGTGTTAGAGCATGGAGTCCTTTCATG...TGTCTCAGAAGCTTCTAGAGAAACTTGTGTAGCTTTGACTGATTGCCTTAATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578091.5
ENST00000579851.5
CDS-3UTR GCA 90 bp AGATTAAGGCAATCAGTCAAAGCTACACAAGTTTCTCTAGAAGCTTCTGAGACACTTGAGTCAGGTGTTTaGATCCCTGGCGATAAATAT +
Preference number: 4 (lower is better)
Translates to: RLRQSVKATQVSLEASETLESGV*IPGDKY
Trigger: ATATTTATCGCCAGGGATGCAAACACCTGACTCAAG...TGTCTCAGAAGCTTCTAGAGAAACTTGTGTAGCTTTGACTGATTGCCTTAATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578091.5
ENST00000579851.5
CDS-3UTR GCA 90 bp TTTTTCCTAAGACTTTCATCACCAATATCGCCTTATACCCTGCTTTTGTTGGGTTTTTACCGTGCATACTaGTTGAGTCAGGTGTTTGCA +
Preference number: 4 (lower is better)
Translates to: FFLRLSSPISPYTLLLLGFYRAY*LSQVFA
Trigger: TGCAAACACCTGACTCAAGCAGTATGCACGGTAAAA...ACCCAACAAAAGCAGGGTATAAGGCGATATTGGTGATGAAAGTCTTAGGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000319481.8
CDS-3UTR GCA 90 bp GTAAATATGGCAACAGCAACCATAAAAAGCATATTCCCCAGCAGTGTTCTCTTAGGGAACAGTAGTGAGTaGTGTAAGCAGAATGTTCTT +
Preference number: 4 (lower is better)
Translates to: VNMATATIKSIFPSSVLLGNSSE*CKQNVL
Trigger: AAGAACATTCTGCTTACAGCACTCACTACTGTTCCC...TAAGAGAACACTGCTGGGGAATATGCTTTTTATGGTTGCTGTTGCCATATTTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319481.8
CDS-3UTR GCA 90 bp TTTTTCCTAAGACTTTCATCACCAATATCGCCTTATACCCTGCTTTTGTTGGGTTTTCTACTGCCCAAATaGTCTCCTTCCTCTTCAAAG +
Preference number: 4 (lower is better)
Translates to: FFLRLSSPISPYTLLLLGFLLPK*SPSSSK
Trigger: CTTTGAAGAGGAAGGAGAGCATTTGGGCAGTAGAAA...ACCCAACAAAAGCAGGGTATAAGGCGATATTGGTGATGAAAGTCTTAGGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR GCA 90 bp TTTTTCCTAAGACTTTCATCACCAATATCGCCTTATACCCTGCTTTTGTTGGGTAGGTGCTCATCTGTTTaGTGTTCTTCTTCTCTTCTG +
Preference number: 4 (lower is better)
Translates to: FFLRLSSPISPYTLLLLGRCSSV*CSSSLL
Trigger: CAGAAGAGAAGAAGAACAGCAAACAGATGAGCACCT...ACCCAACAAAAGCAGGGTATAAGGCGATATTGGTGATGAAAGTCTTAGGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR GCA 90 bp AGGAGGAGAGTTCTAAATATGTCAAAGGTTACATCTAAAACATTCAAGCATGACCCAACTCCTCAGAGGTaGTCATCTGTTTGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: RRRVLNMSKVTSKTFKHDPTPQR*SSVCCS
Trigger: AGAACAGCAAACAGATGAGCACCTCTGAGGAGTTGG...GTCATGCTTGAATGTTTTAGATGTAACCTTTGACATATTTAGAACTCTCCTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR CCA 90 bp ATTTCCACATTGCCATACTGTTCGATCCACAGTTTACCCACAATGATATTATGCTATGCACACAGCAGGTaGGATTTGTCCATGTATATG +
Preference number: 4 (lower is better)
Translates to: ISTLPYCSIHSLPTMILCYAHSR*DLSMYM
Trigger: CATATACATGGACAAATCCCACCTGCTGTGTGCATA...GCATAATATCATTGTGGGTAAACTGTGGATCGAACAGTATGGCAATGTGGAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578055.5
CDS-3UTR CCA 90 bp AGGAGGAGAGTTCTAAATATGTCAAAGGTTACATCTAAAACATTCAAGCATGACACCTGCAGTCTGTCTTaGGAATCACACTCTCCATGT +
Preference number: 4 (lower is better)
Translates to: RRRVLNMSKVTSKTFKHDTCSLS*ESHSPC
Trigger: ACATGGAGAGTGTGATTCCCAAGACAGACTGCAGGT...GTCATGCTTGAATGTTTTAGATGTAACCTTTGACATATTTAGAACTCTCCTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR CCA 90 bp TTTTTCCTAAGACTTTCATCACCAATATCGCCTTATACCCTGCTTTTGTTGGGTAGTGGCATTTGCCACTaGAAGTGGAAGCATTTAACA +
Preference number: 4 (lower is better)
Translates to: FFLRLSSPISPYTLLLLGSGICH*KWKHLT
Trigger: TGTTAAATGCTTCCACTTCCAGTGGCAAATGCCACT...ACCCAACAAAAGCAGGGTATAAGGCGATATTGGTGATGAAAGTCTTAGGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR TCA 90 bp AGATTAAGGCAATCAGTCAAAGCTACACAAGTTTCTCTAGAAGCTTCTGAGACAGGTGTATTTCCTAACTaGTCCGAACAGTTAACATCA +
Preference number: 4 (lower is better)
Translates to: RLRQSVKATQVSLEASETGVFPN*SEQLTS
Trigger: TGATGTTAACTGTTCGGATCAGTTAGGAAATACACC...TGTCTCAGAAGCTTCTAGAGAAACTTGTGTAGCTTTGACTGATTGCCTTAATCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578091.5
ENST00000579851.5
CDS-3UTR TCA 90 bp AGGAGGAGAGTTCTAAATATGTCAAAGGTTACATCTAAAACATTCAAGCATGACGGTACTTTGCAAACTTaGAATGCACAAGGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: RRRVLNMSKVTSKTFKHDGTLQT*NAQGLL
Trigger: AAGGAGGCCTTGTGCATTTCAAGTTTGCAAAGTACC...GTCATGCTTGAATGTTTTAGATGTAACCTTTGACATATTTAGAACTCTCCTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR GCA 90 bp TTTTTCCTAAGACTTTCATCACCAATATCGCCTTATACCCTGCTTTTGTTGGGTATGAGTAACTTCTTTTaGTGTCTGTCCACTCCCATT +
Preference number: 4 (lower is better)
Translates to: FFLRLSSPISPYTLLLLGMSNFF*CLSTPI
Trigger: AATGGGAGTGGACAGACAGCAAAAGAAGTTACTCAT...ACCCAACAAAAGCAGGGTATAAGGCGATATTGGTGATGAAAGTCTTAGGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000319481.8
CDS-3UTR GCA 90 bp AATTTCCACATTGCCATACTGTTCGATCCACAGTTTACCCACAATGATATTATGTTTCTACTGCCCAAATaGTCTCCTTCCTCTTCAAAG +
Preference number: 4 (lower is better)
Translates to: NFHIAILFDPQFTHNDIMFLLPK*SPSSSK
Trigger: CTTTGAAGAGGAAGGAGAGCATTTGGGCAGTAGAAA...CATAATATCATTGTGGGTAAACTGTGGATCGAACAGTATGGCAATGTGGAAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578055.5
CDS-3UTR CCA 90 bp AGGAGGAGAGTTCTAAATATGTCAAAGGTTACATCTAAAACATTCAAGCATGACAGAGGCAGCTATCAGTaGATTTTACCGTGCATACTG +
Preference number: 4 (lower is better)
Translates to: RRRVLNMSKVTSKTFKHDRGSYQ*ILPCIL
Trigger: CAGTATGCACGGTAAAATCCACTGATAGCTGCCTCT...GTCATGCTTGAATGTTTTAGATGTAACCTTTGACATATTTAGAACTCTCCTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319481.8
CDS-3UTR CCA 90 bp GTAAATATGGCAACAGCAACCATAAAAAGCATATTCCCCAGCAGTGTTCTCTTAGTAAAATTATACATCTaGGCAGAATTTGGAGGCCGT +
Preference number: 4 (lower is better)
Translates to: VNMATATIKSIFPSSVLLVKLYI*AEFGGR
Trigger: ACGGCCTCCAAATTCTGCCCAGATGTATAATTTTAC...TAAGAGAACACTGCTGGGGAATATGCTTTTTATGGTTGCTGTTGCCATATTTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR CCA 90 bp TTTTTCCTAAGACTTTCATCACCAATATCGCCTTATACCCTGCTTTTGTTGGGTTCTCAGTCTGGGGTTTaGGTGGATAAATACTATAAG +
Preference number: 4 (lower is better)
Translates to: FFLRLSSPISPYTLLLLGSQSGV*VDKYYK
Trigger: CTTATAGTATTTATCCACCCAAACCCCAGACTGAGA...ACCCAACAAAAGCAGGGTATAAGGCGATATTGGTGATGAAAGTCTTAGGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR TCA 90 bp AGGAGGAGAGTTCTAAATATGTCAAAGGTTACATCTAAAACATTCAAGCATGACTTGTTCTGTGTTTCTTaGTGCCATTGGAGAGAGCAT +
Preference number: 4 (lower is better)
Translates to: RRRVLNMSKVTSKTFKHDLFCVS*CHWREH
Trigger: ATGCTCTCTCCAATGGCATCAAGAAACACAGAACAA...GTCATGCTTGAATGTTTTAGATGTAACCTTTGACATATTTAGAACTCTCCTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR GCA 90 bp TATAATTTCCACATTGCCATACTGTTCGATCCACAGTTTACCCACAATGATATTTTCTGTGTTTTCTACTaGCCAAATGCTCTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: YNFHIAILFDPQFTHNDIFCVFY*PNALLP
Trigger: AGGAAGGAGAGCATTTGGGCAGTAGAAAACACAGAA...AATATCATTGTGGGTAAACTGTGGATCGAACAGTATGGCAATGTGGAAATTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578055.5
CDS-3UTR GCA 90 bp GTAAATATGGCAACAGCAACCATAAAAAGCATATTCCCCAGCAGTGTTCTCTTAAGTACACAGGTACTTTaGAAACTTGAAATGCACAAG +
Preference number: 4 (lower is better)
Translates to: VNMATATIKSIFPSSVLLSTQVL*KLEMHK
Trigger: CTTGTGCATTTCAAGTTTGCAAAGTACCTGTGTACT...TAAGAGAACACTGCTGGGGAATATGCTTTTTATGGTTGCTGTTGCCATATTTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
3UTR CAA 72 bp AGCATTTCTTTAGCCATGTCACACTCCTTAATCATTTaGAGAAAGTTGGAAATTTCCCTATCTAGTCGCTGT +
Preference number: 4 (lower is better)
Translates to: SISLAMSHSLII*RKLEISLSSRC
Trigger: ACAGCGACTAGATAGGGAAATTTCCAACTTTCTCAAAATGATTAAGGAGTGTGACATGGCTAAAGAAATGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578091.5
ENST00000579851.5
CDS-3UTR GCA 90 bp GTAAATATGGCAACAGCAACCATAAAAAGCATATTCCCCAGCAGTGTTCTCTTACACAGAGCTTCTTTTTaGTTTTATCTTGAATGTAGC +
Preference number: 4 (lower is better)
Translates to: VNMATATIKSIFPSSVLLHRASF*FYLECS
Trigger: GCTACATTCAAGATAAAAGCAAAAAGAAGCTCTGTG...TAAGAGAACACTGCTGGGGAATATGCTTTTTATGGTTGCTGTTGCCATATTTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR CCA 90 bp TTTTTCCTAAGACTTTCATCACCAATATCGCCTTATACCCTGCTTTTGTTGGGTAGTCTGGGGTTTGGGTaGATAAATACTATAAGATTT +
Preference number: 4 (lower is better)
Translates to: FFLRLSSPISPYTLLLLGSLGFG*INTIRF
Trigger: AAATCTTATAGTATTTATCCACCCAAACCCCAGACT...ACCCAACAAAAGCAGGGTATAAGGCGATATTGGTGATGAAAGTCTTAGGAAAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR CCA 90 bp GTAAATATGGCAACAGCAACCATAAAAAGCATATTCCCCAGCAGTGTTCTCTTAAGTCTGGGGTTTGGGTaGATAAATACTATAAGATTT +
Preference number: 4 (lower is better)
Translates to: VNMATATIKSIFPSSVLLSLGFG*INTIRF
Trigger: AAATCTTATAGTATTTATCCACCCAAACCCCAGACT...TAAGAGAACACTGCTGGGGAATATGCTTTTTATGGTTGCTGTTGCCATATTTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR GCA 90 bp AGGAGGAGAGTTCTAAATATGTCAAAGGTTACATCTAAAACATTCAAGCATGACAGTACACAGGTACTTTaGAAACTTGAAATGCACAAG +
Preference number: 4 (lower is better)
Translates to: RRRVLNMSKVTSKTFKHDSTQVL*KLEMHK
Trigger: CTTGTGCATTTCAAGTTTGCAAAGTACCTGTGTACT...GTCATGCTTGAATGTTTTAGATGTAACCTTTGACATATTTAGAACTCTCCTCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS GCA 90 bp CCCAGGGCGGCCCGCAAGGTCTCCCTAAGTCACCTTTGCGCAGCCTaGCCCTGGCTCCGGCCGGGCAGCAGCGCCAGCCTTCCCCAGCGA +
Preference number: 5 (lower is better)
Translates to: PRAARKVSLSHLCAA*PWLRPGSSASLPQR
Trigger: TCGCTGGGGAAGGCTGGCGCTGCTGCCCGGCCGGAGCCAGGGGCAGGCTGCGCAAAGGTGACTTAGGGAGACCTTGCGGGCCGCCCTGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399443.7
CDS GCA 90 bp GAGGCGCGACCCAGGGCGGCCCGCAAGGTCTCCCTAAGTCACCTTTaGGCAGCCTGCCCCTGGCTCCGGCCGGGCAGCAGCGCCAGCCTT +
Preference number: 5 (lower is better)
Translates to: EARPRAARKVSLSHL*AACPWLRPGSSASL
Trigger: AAGGCTGGCGCTGCTGCCCGGCCGGAGCCAGGGGCAGGCTGCGCAAAGGTGACTTAGGGAGACCTTGCGGGCCGCCCTGGGTCGCGCCTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399443.7
CDS GCA 90 bp GGCTGGCGCGCTCCACCCTGCGCTCCTCGCAAGCTCCAGCGCGAATaGGCTCGGCCTGCTCCTCCTCCTCCCCTCCAGTCGAGCCGAGGC +
Preference number: 5 (lower is better)
Translates to: GWRAPPCAPRKLQRE*ARPAPPPPLQSSRG
Trigger: GCCTCGGCTCGACTGGAGGGGAGGAGGAGGAGCAGGCCGAGCGCATTCGCGCTGGAGCTTGCGAGGAGCGCAGGGTGGAGCGCGCCAGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399443.7
CDS CCA 90 bp GCGGCCCGCAAGGTCTCCCTAAGTCACCTTTGCGCAGCCTGCCCCTaGCTCCGGCCGGGCAGCAGCGCCAGCCTTCCCCAGCGAGGTCGG +
Preference number: 5 (lower is better)
Translates to: AARKVSLSHLCAACP*LRPGSSASLPQRGR
Trigger: CCGACCTCGCTGGGGAAGGCTGGCGCTGCTGCCCGGCCGGAGCCAGGGGCAGGCTGCGCAAAGGTGACTTAGGGAGACCTTGCGGGCCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399443.7
CDS GCA 90 bp CTCACCTGGGCCAGATCCGAGGACCCCGGCTGGCGCGCTCCACCCTaGGCTCCTCGCAAGCTCCAGCGCGAATGCGCTCGGCCTGCTCCT +
Preference number: 5 (lower is better)
Translates to: LTWARSEDPGWRAPP*APRKLQRECARPAP
Trigger: AGGAGCAGGCCGAGCGCATTCGCGCTGGAGCTTGCGAGGAGCGCAGGGTGGAGCGCGCCAGCCGGGGTCCTCGGATCTGGCCCAGGTGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399443.7
CDS TCA 90 bp GCGGGAACCGGCCTCGAACTCCAGGCGTGGACAGCCGCGAGAAACTaGCCTACGCGGTCACCCGGGCTCCCAGAGCTCCCGAGGCGGTGG +
Preference number: 5 (lower is better)
Translates to: AGTGLELQAWTAARN*PTRSPGLPELPRRW
Trigger: CCACCGCCTCGGGAGCTCTGGGAGCCCGGGTGACCGCGTAGGTCAGTTTCTCGCGGCTGTCCACGCCTGGAGTTCGAGGCCGGTTCCCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399441.4
CDS GCA 90 bp TCCACCCTGCGCTCCTCGCAAGCTCCAGCGCGAATGCGCTCGGCCTaGTCCTCCTCCTCCCCTCCAGTCGAGCCGAGGCGAGCCGATCCG +
Preference number: 5 (lower is better)
Translates to: STLRSSQAPARMRSA*SSSSPPVEPRRADP
Trigger: CGGATCGGCTCGCCTCGGCTCGACTGGAGGGGAGGAGGAGGAGCAGGCCGAGCGCATTCGCGCTGGAGCTTGCGAGGAGCGCAGGGTGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399443.7
CDS CCA 90 bp TTCATTTCTACGCGGTCACCCGGGCTCCCAGAGCTCCCGAGGCGGTaGCCACGACCCCAGGCTTCCCGTCCGCCCGCCCCACGTCGAGGA +
Preference number: 5 (lower is better)
Translates to: FISTRSPGLPELPRR*PRPQASRPPAPRRG
Trigger: TCCTCGACGTGGGGCGGGCGGACGGGAAGCCTGGGGTCGTGGCCACCGCCTCGGGAGCTCTGGGAGCCCGGGTGACCGCGTAGAAATGAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000319481.8
ENST00000578091.5
ENST00000579764.5
ENST00000579851.5
ENST00000582350.5
ENST00000582618.1
ENST00000582645.5
CDS TCA 90 bp ACGGCCCTCCGAGGAGAGGTCGGGGACTGCTCCTTGGGCTCTACGTaGGTGCCGCGCCGAGGCGCCTGCGAGGTCCTAGAGCTGCTGTGC +
Preference number: 5 (lower is better)
Translates to: TALRGEVGDCSLGST*VPRRGACEVLELLC
Trigger: GCACAGCAGCTCTAGGACCTCGCAGGCGCCTCGGCGCGGCACTCACGTAGAGCCCAAGGAGCAGTCCCCGACCTCTCCTCGGAGGGCCGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399443.7
CDS CCA 90 bp TCCCGTCCGCCCGCCCCACGTCGAGGAAGTGGTCGTCACCAACTCTaGCTGGCACTCCCCGAGGACGCTCGAGCCCGCGTAACGTCTGTC +
Preference number: 5 (lower is better)
Translates to: SRPPAPRRGSGRHQL*LALPEDARARVTSV
Trigger: GACAGACGTTACGCGGGCTCGAGCGTCCTCGGGGAGTGCCAGCCAGAGTTGGTGACGACCACTTCCTCGACGTGGGGCGGGCGGACGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319481.8
ENST00000578091.5
ENST00000579851.5
ENST00000582618.1
ENST00000582645.5
CDS CCA 90 bp TCCAATTTAAAATTCCTCACCTGGGCCAGATCCGAGGACCCCGGCTaGCGCGCTCCACCCTGCGCTCCTCGCAAGCTCCAGCGCGAATGC +
Preference number: 5 (lower is better)
Translates to: SNLKFLTWARSEDPG*RAPPCAPRKLQREC
Trigger: GCATTCGCGCTGGAGCTTGCGAGGAGCGCAGGGTGGAGCGCGCCAGCCGGGGTCCTCGGATCTGGCCCAGGTGAGGAATTTTAAATTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399443.7
CDS-3UTR CAA 90 bp TTGTTAACTTCAAGACAGCAATTAAAATCACGGACTGGCAGCTACCTAGGCCCCGGTCGGGCAGAGGCGTaGCCCGCCAGCGGCCCAGGA +
Preference number: 5 (lower is better)
Translates to: LLTSRQQLKSRTGSYLGPGRAEA*PASGPG
Trigger: TCCTGGGCCGCTGGCGGGCAACGCCTCTGCCCGACC...GGGGCCTAGGTAGCTGCCAGTCCGTGATTTTAATTGCTGTCTTGAAGTTAACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399443.7
CDS-3UTR CAA 90 bp ATCACGGACTGGCAGCTACCTAGGCCCCTGGGAGCAGTATCTCAGTCTGGGGTTGGAGGATTGGGCCTGTaGAGCAGAGCTGTGAGTTCT +
Preference number: 5 (lower is better)
Translates to: ITDWQLPRPLGAVSQSGVGGLGL*SRAVSS
Trigger: AGAACTCACAGCTCTGCTCAACAGGCCCAATCCTCC...AACCCCAGACTGAGATACTGCTCCCAGGGGCCTAGGTAGCTGCCAGTCCGTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319481.8
CDS GCA 90 bp CTTGGGTCACTGCAATATCCGCCTTCCGGGTTCAAGCAACTCTCCTaGCTCAGCCTCTTGAGTAGATGGTTACAGGCACGTGCCACCACG +
Preference number: 5 (lower is better)
Translates to: LGSLQYPPSGFKQLS*LSLLSRWLQARATT
Trigger: CGTGGTGGCACGTGCCTGTAACCATCTACTCAAGAGGCTGAGGCAGGAGAGTTGCTTGAACCCGGAAGGCGGATATTGCAGTGACCCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581043.5
CDS-3UTR CAA 90 bp ATCACGGACTGGCAGCTACCTAGGCCCCTGGGAGCAGTATCTCAGTCTGGGGTTTACCGTGCATACTGCTaGAGTCAGGTGTTTGCATCC +
Preference number: 5 (lower is better)
Translates to: ITDWQLPRPLGAVSQSGVYRAYC*SQVFAS
Trigger: GGATGCAAACACCTGACTCAAGCAGTATGCACGGTA...AACCCCAGACTGAGATACTGCTCCCAGGGGCCTAGGTAGCTGCCAGTCCGTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319481.8
CDS-3UTR CAA 90 bp ATCACGGACTGGCAGCTACCTAGGCCCCTGGGAGCAGTATCTCAGTCTGGGGTTTGTTTCTTGATGCCATaGGAGAGAGCATCTCCGCCA +
Preference number: 5 (lower is better)
Translates to: ITDWQLPRPLGAVSQSGVCFLMP*ERASPP
Trigger: TGGCGGAGATGCTCTCTCCAATGGCATCAAGAAACA...AACCCCAGACTGAGATACTGCTCCCAGGGGCCTAGGTAGCTGCCAGTCCGTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR CAA 90 bp ATCACGGACTGGCAGCTACCTAGGCCCCTGGGAGCAGTATCTCAGTCTGGGGTTGTAGGGATTAGGACCTaGATGGAACCACCTCGTCTT +
Preference number: 5 (lower is better)
Translates to: ITDWQLPRPLGAVSQSGVVGIRT*MEPPRL
Trigger: AAGACGAGGTGGTTCCATCAAGGTCCTAATCCCTAC...AACCCCAGACTGAGATACTGCTCCCAGGGGCCTAGGTAGCTGCCAGTCCGTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR CAA 90 bp ATCACGGACTGGCAGCTACCTAGGCCCCTGGGAGCAGTATCTCAGTCTGGGGTTGACTTGGACCTGTTTTaGCGGGCTGCTCTTTGTTTT +
Preference number: 5 (lower is better)
Translates to: ITDWQLPRPLGAVSQSGVDLDLF*RAALCF
Trigger: AAAACAAAGAGCAGCCCGCAAAAACAGGTCCAAGTC...AACCCCAGACTGAGATACTGCTCCCAGGGGCCTAGGTAGCTGCCAGTCCGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR CAA 90 bp TTTCTACAGCTTTCGTCCTGTAAAGGCAGCTCGATGAAGCGGCGTGTCTCCCATGGAGGATTGGGCCTGTaGAGCAGAGCTGTGAGTTCT +
Preference number: 5 (lower is better)
Translates to: FLQLSSCKGSSMKRRVSHGGLGL*SRAVSS
Trigger: AGAACTCACAGCTCTGCTCAACAGGCCCAATCCTCC...ATGGGAGACACGCCGCTTCATCGAGCTGCCTTTACAGGACGAAAGCTGTAGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582645.5
CDS-3UTR CAA 90 bp AACTTCAAGACAGCAATTAAAATCACGGACTGGCAGCTACCTAGGCCCCTGGGAACATCTGGGCAGAATTaGGAGGCCGTGGGGCTATTC +
Preference number: 5 (lower is better)
Translates to: NFKTAIKITDWQLPRPLGTSGQN*EAVGLF
Trigger: GAATAGCCCCACGGCCTCCAAATTCTGCCCAGATGT...TCCCAGGGGCCTAGGTAGCTGCCAGTCCGTGATTTTAATTGCTGTCTTGAAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS TCA 90 bp CCAACAGAGCGACACTCCATCTTTCGTCCTGTAAAGGCAGCTCGATaGAGCGGCGTGTCTCCCATGTCATTCAACACATTCACTTCTGCA +
Preference number: 5 (lower is better)
Translates to: PTERHSIFRPVKAAR*SGVSPMSFNTFTSA
Trigger: TGCAGAAGTGAATGTGTTGAATGACATGGGAGACACGCCGCTTCATCGAGCTGCCTTTACAGGACGAAAGATGGAGTGTCGCTCTGTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582350.5
CDS GCA 90 bp TTGCTGGAGTACACAAGCAGAAACGGAATGATCTCCTCACAGGGATaGTACAGAGTGGGGGTCTCCATGACCTTAGTACTGGACCTCACT +
Preference number: 5 (lower is better)
Translates to: LLEYTSRNGMISSQG*YRVGVSMTLVLDLT
Trigger: AGTGAGGTCCAGTACTAAGGTCATGGAGACCCCCACTCTGTAGCATCCCTGTGAGGAGATCATTCCGTTTCTGCTTGTGTACTCCAGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582618.1
CDS-3UTR CAA 90 bp ATCACGGACTGGCAGCTACCTAGGCCCCTGGGAGCAGTATCTCAGTCTGGGGTTTTCTTCAAGCTTTCTTaGTTGAGTCCTTTCTACAGC +
Preference number: 5 (lower is better)
Translates to: ITDWQLPRPLGAVSQSGVFFKLS*LSPFYS
Trigger: GCTGTAGAAAGGACTCAACAAAGAAAGCTTGAAGAA...AACCCCAGACTGAGATACTGCTCCCAGGGGCCTAGGTAGCTGCCAGTCCGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319481.8
CDS-3UTR CAA 90 bp AACTTCAAGACAGCAATTAAAATCACGGACTGGCAGCTACCTAGGCCCCTGGGATCTCCCAGCAGTGGGTaGAAAGGTTTTCCAGTCCGT +
Preference number: 5 (lower is better)
Translates to: NFKTAIKITDWQLPRPLGSPSSG*KGFPVR
Trigger: ACGGACTGGAAAACCTTTCAACCCACTGCTGGGAGA...TCCCAGGGGCCTAGGTAGCTGCCAGTCCGTGATTTTAATTGCTGTCTTGAAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR CAA 90 bp ATCACGGACTGGCAGCTACCTAGGCCCCTGGGAGCAGTATCTCAGTCTGGGGTTCATTTGTCCCCAGTCTaGTGGTTTATAATTTCCACA +
Preference number: 5 (lower is better)
Translates to: ITDWQLPRPLGAVSQSGVHLSPV*WFIIST
Trigger: TGTGGAAATTATAAACCACAAGACTGGGGACAAATG...AACCCCAGACTGAGATACTGCTCCCAGGGGCCTAGGTAGCTGCCAGTCCGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR CAA 90 bp TGCATTTGCGTGTGGTGGGCCTGGGTGACTGCACCTGTAAAGATAAGCTATCACCAATTAGATATGCATTaGCGTGTGGTGGGCCTGGGT +
Preference number: 5 (lower is better)
Translates to: CICVWWAWVTAPVKISYHQLDMH*RVVGLG
Trigger: ACCCAGGCCCACCACACGCAAATGCATATCTAATTG...GTGATAGCTTATCTTTACAGGTGCAGTCACCCAGGCCCACCACACGCAAATGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399441.4
CDS-3UTR CAA 90 bp ATCACGGACTGGCAGCTACCTAGGCCCCTGGGAGCAGTATCTCAGTCTGGGGTTGACTTACTTCTTCCTTaGCAATTAATGTCAGCAATC +
Preference number: 5 (lower is better)
Translates to: ITDWQLPRPLGAVSQSGVDLLLP*QLMSAI
Trigger: GATTGCTGACATTAATTGCAAAGGAAGAAGTAAGTC...AACCCCAGACTGAGATACTGCTCCCAGGGGCCTAGGTAGCTGCCAGTCCGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319481.8
CDS-3UTR CAA 90 bp TTGTTAACTTCAAGACAGCAATTAAAATCACGGACTGGCAGCTACCTAGGCCCCACATCTGGGCAGAATTaGGAGGCCGTGGGGCTATTC +
Preference number: 5 (lower is better)
Translates to: LLTSRQQLKSRTGSYLGPTSGQN*EAVGLF
Trigger: GAATAGCCCCACGGCCTCCAAATTCTGCCCAGATGT...GGGGCCTAGGTAGCTGCCAGTCCGTGATTTTAATTGCTGTCTTGAAGTTAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR CAA 90 bp TCCAGTGGGTGGGAGGTAAAACTTAGGAAGAATTCAGGAGCTTTTCCATGTCAGGAGCACAGTGCCTGGTaGGCTTCAACAGGTTTTGGG +
Preference number: 5 (lower is better)
Translates to: SSGWEVKLRKNSGAFPCQEHSAW*ASTGFG
Trigger: CCCAAAACCTGTTGAAGCCAACCAGGCACTGTGCTC...CTGACATGGAAAAGCTCCTGAATTCTTCCTAAGTTTTACCTCCCACCCACTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000399441.4
CDS-3UTR CAA 90 bp AAATTACTGCATCTTGCACTTCCCATAACAGAAGGGAGCACAGTGCCTGGTTGGCCAACAGGGACAACTTaGAAGCATCATCTCCTCTGC +
Preference number: 5 (lower is better)
Translates to: KLLHLALPITEGSTVPGWPTGTT*KHHLLC
Trigger: GCAGAGGAGATGATGCTTCAAAGTTGTCCCTGTTGG...CCAACCAGGCACTGTGCTCCCTTCTGTTATGGGAAGTGCAAGATGCAGTAATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399441.4
CDS TCA 90 bp AAGAGAAGCATTACCAACTCCTTTCGTCCTGTAAAGGCAGCTCGATaGAGCGGCGTGTCTCCCATGTCATTCAACACATTCACTTCTGCA +
Preference number: 5 (lower is better)
Translates to: KRSITNSFRPVKAAR*SGVSPMSFNTFTSA
Trigger: TGCAGAAGTGAATGTGTTGAATGACATGGGAGACACGCCGCTTCATCGAGCTGCCTTTACAGGACGAAAGGAGTTGGTAATGCTTCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319481.8
CDS TCA 90 bp CAAGGTCATCTCGCACTAATTCATAAGTCTCTCCCAGCAGTGGGTTaGAAGGTTTTCCAGTCCGTTCCCACTGAGAAGCAACAGCAGATA +
Preference number: 5 (lower is better)
Translates to: QGHLALIHKSLPAVG*KVFQSVPTEKQQQI
Trigger: TATCTGCTGTTGCTTCTCAGTGGGAACGGACTGGAAAACCTTTCAACCCACTGCTGGGAGAGACTTATGAATTAGTGCGAGATGACCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319481.8
ENST00000357041.8
ENST00000399443.7
CDS TCA 90 bp CCTCATTGTGTCGCACTAATTCATAAGTCTCTCCCAGCAGTGGGTTaGAAGGTTTTCCAGTCCGTTCCCACTGAGAAGCAACAGCAGATA +
Preference number: 5 (lower is better)
Translates to: PHCVALIHKSLPAVG*KVFQSVPTEKQQQI
Trigger: TATCTGCTGTTGCTTCTCAGTGGGAACGGACTGGAAAACCTTTCAACCCACTGCTGGGAGAGACTTATGAATTAGTGCGACACAATGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578013.1
CDS TCA 90 bp TTGTTGAGTCCTTTCTACAGCTTTCGTCCTGTAAAGGCAGCTCGATaGAGCGGCGTGTCTCCCATGTCATTCAACACATTCACTTCTGCA +
Preference number: 5 (lower is better)
Translates to: LLSPFYSFRPVKAAR*SGVSPMSFNTFTSA
Trigger: TGCAGAAGTGAATGTGTTGAATGACATGGGAGACACGCCGCTTCATCGAGCTGCCTTTACAGGACGAAAGCTGTAGAAAGGACTCAACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582645.5
CDS GCA 90 bp CATTCCTCGCCATGGTCTCTAATAGTTGTCTTACTTCTTCAGCATTaGCATTTCTGGCGTGATGGAGAAGCTGTTGCTCCGCTTCTGTGT +
Preference number: 5 (lower is better)
Translates to: HSSPWSLIVVLLLQH*HFWRDGEAVAPLLC
Trigger: ACACAGAAGCGGAGCAACAGCTTCTCCATCACGCCAGAAATGGCAATGCTGAAGAAGTAAGACAACTATTAGAGACCATGGCGAGGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000319481.8
ENST00000399441.4
ENST00000578091.5
ENST00000579764.5
ENST00000579851.5
ENST00000581343.1
ENST00000582350.5
ENST00000582618.1
ENST00000582645.5
CDS-3UTR CAA 90 bp GAAAGTTGGAAATTTCCCTATCTAGTCGCTGTTGGCATGACTGTGCTTTCTCTAGGAGGATTGGGCCTGTaGAGCAGAGCTGTGAGTTCT +
Preference number: 5 (lower is better)
Translates to: ESWKFPYLVAVGMTVLSLGGLGL*SRAVSS
Trigger: AGAACTCACAGCTCTGCTCAACAGGCCCAATCCTCC...TAGAGAAAGCACAGTCATGCCAACAGCGACTAGATAGGGAAATTTCCAACTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578091.5
ENST00000579851.5
CDS-3UTR CAA 90 bp TACCGTGCATACTGCTTGAGTCAGGTGTTTGCATCCCTGGCGATAAATATTATGCCAGCCAGTCCTCTCTaGACTGCTGAAGGCTATTCT +
Preference number: 5 (lower is better)
Translates to: YRAYCLSQVFASLAINIMPASPL*TAEGYS
Trigger: AGAATAGCCTTCAGCAGTCAAGAGAGGACTGGCTGG...CATAATATTTATCGCCAGGGATGCAAACACCTGACTCAAGCAGTATGCACGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578091.5
ENST00000579851.5
CDS-3UTR CAA 90 bp ACTGCTTCCAATCTACTCAGGGACCTTTCGGACTCGGAATCTGACAGCGCATCAATTCCTCACCCCTTCTaGTTTGGTGAAGAGATTAAG +
Preference number: 5 (lower is better)
Translates to: TASNLLRDLSDSESDSASIPHPF*FGEEIK
Trigger: CTTAATCTCTTCACCAAACAAGAAGGGGTGAGGAAT...TGATGCGCTGTCAGATTCCGAGTCCGAAAGGTCCCTGAGTAGATTGGAAGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584119.1
CDS-3UTR CAA 90 bp AACTTCAAGACAGCAATTAAAATCACGGACTGGCAGCTACCTAGGCCCCTGGGAAGGTACTTTGCAAACTaGAAATGCACAAGGCCTCCT +
Preference number: 5 (lower is better)
Translates to: NFKTAIKITDWQLPRPLGRYFAN*KCTRPP
Trigger: AGGAGGCCTTGTGCATTTCAAGTTTGCAAAGTACCT...TCCCAGGGGCCTAGGTAGCTGCCAGTCCGTGATTTTAATTGCTGTCTTGAAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR CAA 90 bp TTTCTACAGCTTTCGTCCTGTAAAGGCAGCTCGATGAAGCGGCGTGTCTCCCATCACCAGCTTCTTCCTTaGCAATTAATGTCAGCAATC +
Preference number: 5 (lower is better)
Translates to: FLQLSSCKGSSMKRRVSHHQLLP*QLMSAI
Trigger: GATTGCTGACATTAATTGCAAAGGAAGAAGCTGGTG...ATGGGAGACACGCCGCTTCATCGAGCTGCCTTTACAGGACGAAAGCTGTAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582645.5
CDS TCA 90 bp GTCTCTAATAGTTGTCTTACTTCTTCAGCATTGCCATTTCTGGCGTaGTGGAGAAGCTGTTGCTCCGCTTCTGTGTTCATTTCTACGCGG +
Preference number: 5 (lower is better)
Translates to: VSNSCLTSSALPFLA*WRSCCSASVFISTR
Trigger: CCGCGTAGAAATGAACACAGAAGCGGAGCAACAGCTTCTCCATCACGCCAGAAATGGCAATGCTGAAGAAGTAAGACAACTATTAGAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000319481.8
ENST00000578091.5
ENST00000579764.5
ENST00000579851.5
ENST00000582350.5
ENST00000582618.1
ENST00000582645.5
CDS TCA 90 bp GTCTCTAATAGTTGTCTTACTTCTTCAGCATTGCCATTTCTGGCGTaGTGGAGAAGCTGTTGCTCCGCTTCTGTGTTCATTTCTCCCGAG +
Preference number: 5 (lower is better)
Translates to: VSNSCLTSSALPFLA*WRSCCSASVFISPE
Trigger: CTCGGGAGAAATGAACACAGAAGCGGAGCAACAGCTTCTCCATCACGCCAGAAATGGCAATGCTGAAGAAGTAAGACAACTATTAGAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399441.4
CDS-3UTR CAA 90 bp TTTCTACAGCTTTCGTCCTGTAAAGGCAGCTCGATGAAGCGGCGTGTCTCCCATTTCTTCAAGCTTTCTTaGTTGAGTCCTTTCTACAGC +
Preference number: 5 (lower is better)
Translates to: FLQLSSCKGSSMKRRVSHFFKLS*LSPFYS
Trigger: GCTGTAGAAAGGACTCAACAAAGAAAGCTTGAAGAA...ATGGGAGACACGCCGCTTCATCGAGCTGCCTTTACAGGACGAAAGCTGTAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582645.5
CDS-3UTR CAA 90 bp ACACTTGTTAACTTCAAGACAGCAATTAAAATCACGGACTGGCAGCTACCTAGGCCAGCCAGTCCTCTCTaGACTGCTGAAGGCTATTCT +
Preference number: 5 (lower is better)
Translates to: TLVNFKTAIKITDWQLPRPASPL*TAEGYS
Trigger: AGAATAGCCTTCAGCAGTCAAGAGAGGACTGGCTGG...CCTAGGTAGCTGCCAGTCCGTGATTTTAATTGCTGTCTTGAAGTTAACAAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319481.8
CDS TCA 90 bp GAACATAGAATGATTTTCACCTTTCGTCCTGTAAAGGCAGCTCGATaGAGCGGCGTGTCTCCCATGTCATTCAACACATTCACTTCTGCA +
Preference number: 5 (lower is better)
Translates to: EHRMIFTFRPVKAAR*SGVSPMSFNTFTSA
Trigger: TGCAGAAGTGAATGTGTTGAATGACATGGGAGACACGCCGCTTCATCGAGCTGCCTTTACAGGACGAAAGGTGAAAATCATTCTATGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582618.1
CDS CCA 90 bp AAGAACGCTTCCAGGGATAATGAATACACTTTCAGAATCCGGCACTaGCATTTCATCCAACTCCTCAGAGGTGCTCATCTGTTTGCTGTT +
Preference number: 5 (lower is better)
Translates to: KNASRDNEYTFRIRH*HFIQLLRGAHLFAV
Trigger: AACAGCAAACAGATGAGCACCTCTGAGGAGTTGGATGAAATGCCAGTGCCGGATTCTGAAAGTGTATTCATTATCCCTGGAAGCGTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319481.8
ENST00000357041.8
ENST00000399443.7
ENST00000578013.1
CDS-3UTR CAA 90 bp GAAAGTTGGAAATTTCCCTATCTAGTCGCTGTTGGCATGACTGTGCTTTCTCTATACCGTGCATACTGCTaGAGTCAGGTGTTTGCATCC +
Preference number: 5 (lower is better)
Translates to: ESWKFPYLVAVGMTVLSLYRAYC*SQVFAS
Trigger: GGATGCAAACACCTGACTCAAGCAGTATGCACGGTA...TAGAGAAAGCACAGTCATGCCAACAGCGACTAGATAGGGAAATTTCCAACTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578091.5
ENST00000579851.5
CDS-3UTR CAA 90 bp GTGTTTGCATCCCTGGCGATAAATATTATGAACTGCATCAGGCTGTTTCCTATACCAGCCAGTCCTCTCTaGACTGCTGAAGGCTATTCT +
Preference number: 5 (lower is better)
Translates to: VFASLAINIMNCIRLFPIPASPL*TAEGYS
Trigger: AGAATAGCCTTCAGCAGTCAAGAGAGGACTGGCTGG...TATAGGAAACAGCCTGATGCAGTTCATAATATTTATCGCCAGGGATGCAAACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578091.5
ENST00000579851.5
CDS-3UTR CAA 90 bp CTCCGCCACCACAGTCTTTTTCTTCGGACATTCTGTGTTTTCTACTGCCCAAATCTCACCCCTTCTTGTTaGGTGAAGAGATTAAGGCAA +
Preference number: 5 (lower is better)
Translates to: LRHHSLFLRTFCVFYCPNLTPSC*VKRLRQ
Trigger: TTGCCTTAATCTCTTCACCAAACAAGAAGGGGTGAG...ATTTGGGCAGTAGAAAACACAGAATGTCCGAAGAAAAAGACTGTGGTGGCGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000584119.1
CDS-3UTR CAA 90 bp TTGTTAACTTCAAGACAGCAATTAAAATCACGGACTGGCAGCTACCTAGGCCCCGAGGTGCTCATCTGTTaGCTGTTCTTCTTCTCTTCT +
Preference number: 5 (lower is better)
Translates to: LLTSRQQLKSRTGSYLGPEVLIC*LFFFSS
Trigger: AGAAGAGAAGAAGAACAGCAAACAGATGAGCACCTC...GGGGCCTAGGTAGCTGCCAGTCCGTGATTTTAATTGCTGTCTTGAAGTTAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR CAA 90 bp TCCAGTGGGTGGGAGGTAAAACTTAGGAAGAATTCAGGAGCTTTTCCATGTCAGGACCCAGTTCTCAGCTaGATTTTTCCCTTTGGCAAA +
Preference number: 5 (lower is better)
Translates to: SSGWEVKLRKNSGAFPCQDPVLS*IFPFGK
Trigger: TTTGCCAAAGGGAAAAATCAAGCTGAGAACTGGGTC...CTGACATGGAAAAGCTCCTGAATTCTTCCTAAGTTTTACCTCCCACCCACTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000399441.4
CDS-3UTR CAA 90 bp TTTCTACAGCTTTCGTCCTGTAAAGGCAGCTCGATGAAGCGGCGTGTCTCCCATTTCAAGCTTTCTTTGTaGAGTCCTTTCTACAGCTTT +
Preference number: 5 (lower is better)
Translates to: FLQLSSCKGSSMKRRVSHFKLSL*SPFYSF
Trigger: AAAGCTGTAGAAAGGACTCAACAAAGAAAGCTTGAA...ATGGGAGACACGCCGCTTCATCGAGCTGCCTTTACAGGACGAAAGCTGTAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582645.5
CDS-3UTR CAA 90 bp GTAAATATGGCAACAGCAACCATAAAAAGCATATTCCCCAGCAGTGTTCTCTTATCTCCCAGCAGTGGGTaGAAAGGTTTTCCAGTCCGT +
Preference number: 5 (lower is better)
Translates to: VNMATATIKSIFPSSVLLSPSSG*KGFPVR
Trigger: ACGGACTGGAAAACCTTTCAACCCACTGCTGGGAGA...TAAGAGAACACTGCTGGGGAATATGCTTTTTATGGTTGCTGTTGCCATATTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR CAA 90 bp CTGGGAACAGTAGTGAGTGCTGTAAGCAGAATGTTCTTCTATTGCTTCCAGCCATTCTTCAAGCTTTCTTaGTTGAGTCCTTTCTACAGC +
Preference number: 5 (lower is better)
Translates to: LGTVVSAVSRMFFYCFQPFFKLS*LSPFYS
Trigger: GCTGTAGAAAGGACTCAACAAAGAAAGCTTGAAGAA...TGGCTGGAAGCAATAGAAGAACATTCTGCTTACAGCACTCACTACTGTTCCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578091.5
ENST00000579851.5
CDS-3UTR CAA 90 bp AGATTAAGGCAATCAGTCAAAGCTACACAAGTTTCTCTAGAAGCTTCTGAGACATACCGTGCATACTGCTaGAGTCAGGTGTTTGCATCC +
Preference number: 5 (lower is better)
Translates to: RLRQSVKATQVSLEASETYRAYC*SQVFAS
Trigger: GGATGCAAACACCTGACTCAAGCAGTATGCACGGTA...TGTCTCAGAAGCTTCTAGAGAAACTTGTGTAGCTTTGACTGATTGCCTTAATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578091.5
ENST00000579851.5
CDS-3UTR CAA 90 bp TTGGAAATTTCCCTATCTAGTCGCTGTTGGCATGACTGTGCTTTCTCTAATGATCAGAATGTTCTTCTATaGCTTCCAGCCAGTCCTCTC +
Preference number: 5 (lower is better)
Translates to: LEISLSSRCWHDCAFSNDQNVLL*LPASPL
Trigger: GAGAGGACTGGCTGGAAGCAATAGAAGAACATTCTG...ATCATTAGAGAAAGCACAGTCATGCCAACAGCGACTAGATAGGGAAATTTCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578091.5
ENST00000579851.5
CDS-3UTR CAA 90 bp ACACTTGTTAACTTCAAGACAGCAATTAAAATCACGGACTGGCAGCTACCTAGGCTCACCCCTTCTTGTTaGGTGAAGAGATTAAGGCAA +
Preference number: 5 (lower is better)
Translates to: TLVNFKTAIKITDWQLPRLTPSC*VKRLRQ
Trigger: TTGCCTTAATCTCTTCACCAAACAAGAAGGGGTGAG...CCTAGGTAGCTGCCAGTCCGTGATTTTAATTGCTGTCTTGAAGTTAACAAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319481.8
CDS-3UTR CAA 90 bp TTTTTCCTAAGACTTTCATCACCAATATCGCCTTATACCCTGCTTTTGTTGGGTTGTTTCTTGATGCCATaGGAGAGAGCATCTCCGCCA +
Preference number: 5 (lower is better)
Translates to: FFLRLSSPISPYTLLLLGCFLMP*ERASPP
Trigger: TGGCGGAGATGCTCTCTCCAATGGCATCAAGAAACA...ACCCAACAAAAGCAGGGTATAAGGCGATATTGGTGATGAAAGTCTTAGGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR CAA 90 bp ACACTTGTTAACTTCAAGACAGCAATTAAAATCACGGACTGGCAGCTACCTAGGGAGGTGCTCATCTGTTaGCTGTTCTTCTTCTCTTCT +
Preference number: 5 (lower is better)
Translates to: TLVNFKTAIKITDWQLPREVLIC*LFFFSS
Trigger: AGAAGAGAAGAAGAACAGCAAACAGATGAGCACCTC...CCTAGGTAGCTGCCAGTCCGTGATTTTAATTGCTGTCTTGAAGTTAACAAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR CAA 90 bp ACACTTGTTAACTTCAAGACAGCAATTAAAATCACGGACTGGCAGCTACCTAGGTTTGCGGGCTGCTCTTaGTTTTTCCTCAAGTCGTTT +
Preference number: 5 (lower is better)
Translates to: TLVNFKTAIKITDWQLPRFAGCS*FFLKSF
Trigger: AAACGACTTGAGGAAAAACAAAGAGCAGCCCGCAAA...CCTAGGTAGCTGCCAGTCCGTGATTTTAATTGCTGTCTTGAAGTTAACAAGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR CAA 90 bp GTAAATATGGCAACAGCAACCATAAAAAGCATATTCCCCAGCAGTGTTCTCTTACAGATCCTGGACCACTaGTCTGTGTCCAAAATAGCA +
Preference number: 5 (lower is better)
Translates to: VNMATATIKSIFPSSVLLQILDH*SVSKIA
Trigger: TGCTATTTTGGACACAGACAAGTGGTCCAGGATCTG...TAAGAGAACACTGCTGGGGAATATGCTTTTTATGGTTGCTGTTGCCATATTTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000319481.8
CDS-3UTR CAA 90 bp GGAGACAGACATCTTTCTCTGAAGATGATTTTTGAGGGCTTCAAATTTAAAGGGCAGATCCTGGACCACTaGTCTGTGTCCAAAATAGCA +
Preference number: 5 (lower is better)
Translates to: GDRHLSLKMIFEGFKFKGQILDH*SVSKIA
Trigger: TGCTATTTTGGACACAGACAAGTGGTCCAGGATCTG...CCCTTTAAATTTGAAGCCCTCAAAAATCATCTTCAGAGAAAGATGTCTGTCTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399441.4
CDS-3UTR CAA 90 bp ACACTTGTTAACTTCAAGACAGCAATTAAAATCACGGACTGGCAGCTACCTAGGATTCCTCACCCCTTCTaGTTTGGTGAAGAGATTAAG +
Preference number: 5 (lower is better)
Translates to: TLVNFKTAIKITDWQLPRIPHPF*FGEEIK
Trigger: CTTAATCTCTTCACCAAACAAGAAGGGGTGAGGAAT...CCTAGGTAGCTGCCAGTCCGTGATTTTAATTGCTGTCTTGAAGTTAACAAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319481.8
CDS-3UTR CAA 90 bp ACACTTGTTAACTTCAAGACAGCAATTAAAATCACGGACTGGCAGCTACCTAGGACTGGCATCGTGATCTaGGATAGTTCCATTCCAATA +
Preference number: 5 (lower is better)
Translates to: TLVNFKTAIKITDWQLPRTGIVI*DSSIPI
Trigger: TATTGGAATGGAACTATCCAAGATCACGATGCCAGT...CCTAGGTAGCTGCCAGTCCGTGATTTTAATTGCTGTCTTGAAGTTAACAAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR CAA 90 bp TTTTTCCTAAGACTTTCATCACCAATATCGCCTTATACCCTGCTTTTGTTGGGTAAGGTGATGGTTCCTTaGGGTTCTGCTTCTACACTC +
Preference number: 5 (lower is better)
Translates to: FFLRLSSPISPYTLLLLGKVMVP*GSASTL
Trigger: GAGTGTAGAAGCAGAACCCAAAGGAACCATCACCTT...ACCCAACAAAAGCAGGGTATAAGGCGATATTGGTGATGAAAGTCTTAGGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR CAA 90 bp GTAAATATGGCAACAGCAACCATAAAAAGCATATTCCCCAGCAGTGTTCTCTTAAAGGTGATGGTTCCTTaGGGTTCTGCTTCTACACTC +
Preference number: 5 (lower is better)
Translates to: VNMATATIKSIFPSSVLLKVMVP*GSASTL
Trigger: GAGTGTAGAAGCAGAACCCAAAGGAACCATCACCTT...TAAGAGAACACTGCTGGGGAATATGCTTTTTATGGTTGCTGTTGCCATATTTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR CAA 90 bp TTGTTAACTTCAAGACAGCAATTAAAATCACGGACTGGCAGCTACCTAGGCCCCTTTATAATTTCCACATaGCCATACTGTTCGATCCAC +
Preference number: 5 (lower is better)
Translates to: LLTSRQQLKSRTGSYLGPFIIST*PYCSIH
Trigger: GTGGATCGAACAGTATGGCAATGTGGAAATTATAAA...GGGGCCTAGGTAGCTGCCAGTCCGTGATTTTAATTGCTGTCTTGAAGTTAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR CAA 90 bp GTAAATATGGCAACAGCAACCATAAAAAGCATATTCCCCAGCAGTGTTCTCTTAGACTTGGACCTGTTTTaGCGGGCTGCTCTTTGTTTT +
Preference number: 5 (lower is better)
Translates to: VNMATATIKSIFPSSVLLDLDLF*RAALCF
Trigger: AAAACAAAGAGCAGCCCGCAAAAACAGGTCCAAGTC...TAAGAGAACACTGCTGGGGAATATGCTTTTTATGGTTGCTGTTGCCATATTTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR CAA 90 bp AGGAGGAGAGTTCTAAATATGTCAAAGGTTACATCTAAAACATTCAAGCATGACCAGTCCTCTTCTGACTaGGACCTGTTTTTGCGGGCT +
Preference number: 5 (lower is better)
Translates to: RRRVLNMSKVTSKTFKHDQSSSD*DLFLRA
Trigger: AGCCCGCAAAAACAGGTCCAAGTCAGAAGAGGACTG...GTCATGCTTGAATGTTTTAGATGTAACCTTTGACATATTTAGAACTCTCCTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR CAA 90 bp TACCGTGCATACTGCTTGAGTCAGGTGTTTGCATCCCTGGCGATAAATATTATGCCAACTCTTCTTCCTTaGCAATTAATGTCAGCAATC +
Preference number: 5 (lower is better)
Translates to: YRAYCLSQVFASLAINIMPTLLP*QLMSAI
Trigger: GATTGCTGACATTAATTGCAAAGGAAGAAGAGTTGG...CATAATATTTATCGCCAGGGATGCAAACACCTGACTCAAGCAGTATGCACGGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578091.5
CDS-3UTR CAA 90 bp CTATACCATGAAAGGACTCCATGCTCTAACACTACCCAGAATAATCTCCAGCCAGCATTACCAACTCCTTaGCAATTAATGTCAGCAATC +
Preference number: 5 (lower is better)
Translates to: LYHERTPCSNTTQNNLQPALPTP*QLMSAI
Trigger: GATTGCTGACATTAATTGCAAAGGAGTTGGTAATGC...TGGCTGGAGATTATTCTGGGTAGTGTTAGAGCATGGAGTCCTTTCATGGTATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579851.5
CDS CCA 90 bp CATGACTGTGCTTTCTATGCTGATATTCCTCTAGGGATAAGGCACTaGTGTCACTTCAGAAGACTTCTCCATTCATTAATGATGCTTTAC +
Preference number: 5 (lower is better)
Translates to: HDCAFYADIPLGIRH*CHFRRLLHSLMMLY
Trigger: GTAAAGCATCATTAATGAATGGAGAAGTCTTCTGAAGTGACACCAGTGCCTTATCCCTAGAGGAATATCAGCATAGAAAGCACAGTCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581043.5
CDS-3UTR CAA 90 bp ACACTTGTTAACTTCAAGACAGCAATTAAAATCACGGACTGGCAGCTACCTAGGTTCAAGCTTTCTTTGTaGAGTCCTTTCTACAGCTTC +
Preference number: 5 (lower is better)
Translates to: TLVNFKTAIKITDWQLPRFKLSL*SPFYSF
Trigger: GAAGCTGTAGAAAGGACTCAACAAAGAAAGCTTGAA...CCTAGGTAGCTGCCAGTCCGTGATTTTAATTGCTGTCTTGAAGTTAACAAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319481.8
CDS-3UTR CAA 90 bp TATAATTTCCACATTGCCATACTGTTCGATCCACAGTTTACCCACAATGATATTTGTTTCTTGATGCCATaGGAGAGAGCATCTCCGCCA +
Preference number: 5 (lower is better)
Translates to: YNFHIAILFDPQFTHNDICFLMP*ERASPP
Trigger: TGGCGGAGATGCTCTCTCCAATGGCATCAAGAAACA...AATATCATTGTGGGTAAACTGTGGATCGAACAGTATGGCAATGTGGAAATTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578055.5
CDS-3UTR CAA 90 bp GTAAATATGGCAACAGCAACCATAAAAAGCATATTCCCCAGCAGTGTTCTCTTACATGTATATGCCTCATaGTGTTCAAGGAGCTCCAAG +
Preference number: 5 (lower is better)
Translates to: VNMATATIKSIFPSSVLLHVYAS*CSRSSK
Trigger: CTTGGAGCTCCTTGAACACAATGAGGCATATACATG...TAAGAGAACACTGCTGGGGAATATGCTTTTTATGGTTGCTGTTGCCATATTTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR CAA 90 bp ACACTTGTTAACTTCAAGACAGCAATTAAAATCACGGACTGGCAGCTACCTAGGCATTTGTCCCCAGTCTaGTGGTTTATAATTTCCACA +
Preference number: 5 (lower is better)
Translates to: TLVNFKTAIKITDWQLPRHLSPV*WFIIST
Trigger: TGTGGAAATTATAAACCACAAGACTGGGGACAAATG...CCTAGGTAGCTGCCAGTCCGTGATTTTAATTGCTGTCTTGAAGTTAACAAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR CAA 90 bp GTAAATATGGCAACAGCAACCATAAAAAGCATATTCCCCAGCAGTGTTCTCTTATTTGCGGGCTGCTCTTaGTTTTTCCTCAAGTCGTTT +
Preference number: 5 (lower is better)
Translates to: VNMATATIKSIFPSSVLLFAGCS*FFLKSF
Trigger: AAACGACTTGAGGAAAAACAAAGAGCAGCCCGCAAA...TAAGAGAACACTGCTGGGGAATATGCTTTTTATGGTTGCTGTTGCCATATTTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS TCA 90 bp CCAAACACCCTGACTTGTATGCATTTTAATAAATGTCAGGCAAATTaGAGTAATTTCTGTCCCAGTAGCTGCCAGAGTAAATCCAGTCCT +
Preference number: 5 (lower is better)
Translates to: PNTLTCMHFNKCQAN*SNFCPSSCQSKSSP
Trigger: AGGACTGGATTTACTCTGGCAGCTACTGGGACAGAAATTACTTCAATTTGCCTGACATTTATTAAAATGCATACAAGTCAGGGTGTTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319481.8
ENST00000357041.8
ENST00000399443.7
CDS-3UTR CAA 90 bp AGGAGGAGAGTTCTAAATATGTCAAAGGTTACATCTAAAACATTCAAGCATGACCAGAATGTTCTTCTATaGCTTCCAGCCAGTCCTCTC +
Preference number: 5 (lower is better)
Translates to: RRRVLNMSKVTSKTFKHDQNVLL*LPASPL
Trigger: GAGAGGACTGGCTGGAAGCAATAGAAGAACATTCTG...GTCATGCTTGAATGTTTTAGATGTAACCTTTGACATATTTAGAACTCTCCTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319481.8
CDS-3UTR CAA 90 bp ACACTTGTTAACTTCAAGACAGCAATTAAAATCACGGACTGGCAGCTACCTAGGTTTATAATTTCCACATaGCCATACTGTTCGATCCAC +
Preference number: 5 (lower is better)
Translates to: TLVNFKTAIKITDWQLPRFIIST*PYCSIH
Trigger: GTGGATCGAACAGTATGGCAATGTGGAAATTATAAA...CCTAGGTAGCTGCCAGTCCGTGATTTTAATTGCTGTCTTGAAGTTAACAAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR CAA 90 bp TTTTTCCTAAGACTTTCATCACCAATATCGCCTTATACCCTGCTTTTGTTGGGTTATACCCTGCTTTTGTaGGGTGAAATGCAGTTATCT +
Preference number: 5 (lower is better)
Translates to: FFLRLSSPISPYTLLLLGYTLLL*GEMQLS
Trigger: AGATAACTGCATTTCACCCAACAAAAGCAGGGTATA...ACCCAACAAAAGCAGGGTATAAGGCGATATTGGTGATGAAAGTCTTAGGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR CAA 90 bp AGGAGGAGAGTTCTAAATATGTCAAAGGTTACATCTAAAACATTCAAGCATGACAGGTACTTTGCAAACTaGAAATGCACAAGGCCTCCT +
Preference number: 5 (lower is better)
Translates to: RRRVLNMSKVTSKTFKHDRYFAN*KCTRPP
Trigger: AGGAGGCCTTGTGCATTTCAAGTTTGCAAAGTACCT...GTCATGCTTGAATGTTTTAGATGTAACCTTTGACATATTTAGAACTCTCCTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319481.8
ENST00000399443.7
CDS-3UTR CAA 90 bp GGAGACAGACATCTTTCTCTGAAGATGATTTTTGAGGGCTTCAAATTTAAAGGGGACTTACTTCTTCCTTaGCAATTAATGTCAGCAATC +
Preference number: 5 (lower is better)
Translates to: GDRHLSLKMIFEGFKFKGDLLLP*QLMSAI
Trigger: GATTGCTGACATTAATTGCAAAGGAAGAAGTAAGTC...CCCTTTAAATTTGAAGCCCTCAAAAATCATCTTCAGAGAAAGATGTCTGTCTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399441.4
CDS-3UTR CAA 90 bp TATAATTTCCACATTGCCATACTGTTCGATCCACAGTTTACCCACAATGATATTCATTTGTCCCCAGTCTaGTGGTTTATAATTTCCACA +
Preference number: 5 (lower is better)
Translates to: YNFHIAILFDPQFTHNDIHLSPV*WFIIST
Trigger: TGTGGAAATTATAAACCACAAGACTGGGGACAAATG...AATATCATTGTGGGTAAACTGTGGATCGAACAGTATGGCAATGTGGAAATTATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578055.5
CDS-3UTR CAA 90 bp TATAATTTCCACATTGCCATACTGTTCGATCCACAGTTTACCCACAATGATATTTTTATAATTTCCACATaGCCATACTGTTCGATCCAC +
Preference number: 5 (lower is better)
Translates to: YNFHIAILFDPQFTHNDIFIIST*PYCSIH
Trigger: GTGGATCGAACAGTATGGCAATGTGGAAATTATAAA...AATATCATTGTGGGTAAACTGTGGATCGAACAGTATGGCAATGTGGAAATTATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000578055.5
CDS CAA 72 bp AGCGCCAGCCTTCCCCAGCGAGGTCGGGCAGAGGCGTaGCCCGCCAGCGGCCCAGGACTCCCGCGCCGCGCC +
Preference number: 6 (lower is better)
Translates to: SASLPQRGRAEA*PASGPGLPRRA
Trigger: GGCGCGGCGCGGGAGTCCTGGGCCGCTGGCGGGCAACGCCTCTGCCCGACCTCGCTGGGGAAGGCTGGCGCT
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399443.7
CDS CAA 90 bp GGAGGCGCGACCCAGGGCGGCCCGCAAGGTCTCCCTAAGTCACCTTaGCGCAGCCTGCCCCTGGCTCCGGCCGGGCAGCAGCGCCAGCCT +
Preference number: 6 (lower is better)
Translates to: GGATQGGPQGLPKSP*RSLPLAPAGQQRQP
Trigger: AGGCTGGCGCTGCTGCCCGGCCGGAGCCAGGGGCAGGCTGCGCAAAGGTGACTTAGGGAGACCTTGCGGGCCGCCCTGGGTCGCGCCTCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399443.7
CDS GCA 72 bp GCCAGATCCGAGGACCCCGGCTGGCGCGCTCCACCCTaGGCTCCTCGCAAGCTCCAGCGCGAATGCGCTCGG +
Preference number: 6 (lower is better)
Translates to: ARSEDPGWRAPP*APRKLQRECAR
Trigger: CCGAGCGCATTCGCGCTGGAGCTTGCGAGGAGCGCAGGGTGGAGCGCGCCAGCCGGGGTCCTCGGATCTGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399443.7
CDS CCA 72 bp GCACGGCCCTCCGAGGAGAGGTCGGGGACTGCTCCTTaGGCTCTACGTGAGTGCCGCGCCGAGGCGCCTGCG +
Preference number: 6 (lower is better)
Translates to: ARPSEERSGTAP*ALRECRAEAPA
Trigger: CGCAGGCGCCTCGGCGCGGCACTCACGTAGAGCCCAAGGAGCAGTCCCCGACCTCTCCTCGGAGGGCCGTGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399443.7
CDS TCA 72 bp GGCCTCGAACTCCAGGCGTGGACAGCCGCGAGAAACTaGCCTACGCGGTCACCCGGGCTCCCAGAGCTCCCG +
Preference number: 6 (lower is better)
Translates to: GLELQAWTAARN*PTRSPGLPELP
Trigger: CGGGAGCTCTGGGAGCCCGGGTGACCGCGTAGGTCAGTTTCTCGCGGCTGTCCACGCCTGGAGTTCGAGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399441.4
CDS TCA 72 bp CGAGGAGAGGTCGGGGACTGCTCCTTGGGCTCTACGTaGGTGCCGCGCCGAGGCGCCTGCGAGGTCCTAGAG +
Preference number: 6 (lower is better)
Translates to: RGEVGDCSLGST*VPRRGACEVLE
Trigger: CTCTAGGACCTCGCAGGCGCCTCGGCGCGGCACTCACGTAGAGCCCAAGGAGCAGTCCCCGACCTCTCCTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399443.7
CDS CCA 72 bp CCCGCCCCACGTCGAGGAAGTGGTCGTCACCAACTCTaGCTGGCACTCCCCGAGGACGCTCGAGCCCGCGTA +
Preference number: 6 (lower is better)
Translates to: PAPRRGSGRHQL*LALPEDARARV
Trigger: TACGCGGGCTCGAGCGTCCTCGGGGAGTGCCAGCCAGAGTTGGTGACGACCACTTCCTCGACGTGGGGCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319481.8
ENST00000578091.5
ENST00000579851.5
ENST00000582618.1
ENST00000582645.5
CDS CCA 72 bp CCAGGCTTCCCGTCCGCCCGCCCCACGTCGAGGAAGTaGTCGTCACCAACTCTGGCTGGCACTCCCCGAGGA +
Preference number: 6 (lower is better)
Translates to: PGFPSARPTSRK*SSPTLAGTPRG
Trigger: TCCTCGGGGAGTGCCAGCCAGAGTTGGTGACGACCACTTCCTCGACGTGGGGCGGGCGGACGGGAAGCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000319481.8
ENST00000399441.4
ENST00000578091.5
ENST00000579764.5
ENST00000579851.5
ENST00000582350.5
ENST00000582618.1
ENST00000582645.5
CDS CAA 90 bp TCTTACTTCTTCAGCATTGCCATTTCTGGCGTGATGGAGAAGCTGTaGCTCCGCTTCTGTGTTCATTTCTCCCGAGCGCAGCCCGGCGGG +
Preference number: 6 (lower is better)
Translates to: SYFFSIAISGVMEKL*LRFCVHFSRAQPGG
Trigger: CCCGCCGGGCTGCGCTCGGGAGAAATGAACACAGAAGCGGAGCAACAGCTTCTCCATCACGCCAGAAATGGCAATGCTGAAGAAGTAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399441.4
CDS GCA 72 bp CTGCAATATCCGCCTTCCGGGTTCAAGCAACTCTCCTaGCTCAGCCTCTTGAGTAGATGGTTACAGGCACGT +
Preference number: 6 (lower is better)
Translates to: LQYPPSGFKQLS*LSLLSRWLQAR
Trigger: ACGTGCCTGTAACCATCTACTCAAGAGGCTGAGGCAGGAGAGTTGCTTGAACCCGGAAGGCGGATATTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581043.5
CDS CAA 90 bp TCTTACTTCTTCAGCATTGCCATTTCTGGCGTGATGGAGAAGCTGTaGCTCCGCTTCTGTGTTCATTTCTACGCGGTCACCCGGGCTCCC +
Preference number: 6 (lower is better)
Translates to: SYFFSIAISGVMEKL*LRFCVHFYAVTRAP
Trigger: GGGAGCCCGGGTGACCGCGTAGAAATGAACACAGAAGCGGAGCAACAGCTTCTCCATCACGCCAGAAATGGCAATGCTGAAGAAGTAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000319481.8
ENST00000578091.5
ENST00000579764.5
ENST00000579851.5
ENST00000582350.5
ENST00000582618.1
ENST00000582645.5
CDS TCA 72 bp GTTCCCCATTGCTGGAGTACACAAGCAGAAACGGAATaGTCTCCTCACAGGGATGCTACAGAGTGGGGGTCT +
Preference number: 6 (lower is better)
Translates to: VPHCWSTQAETE*SPHRDATEWGS
Trigger: AGACCCCCACTCTGTAGCATCCCTGTGAGGAGATCATTCCGTTTCTGCTTGTGTACTCCAGCAATGGGGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582618.1
CDS CAA 72 bp TTCAGCATTGCCATTTCTGGCGTGATGGAGAAGCTGTaGCTCCGCTTCTGTGTTCATTTCTCCCGAGCGCAG +
Preference number: 6 (lower is better)
Translates to: FSIAISGVMEKL*LRFCVHFSRAQ
Trigger: CTGCGCTCGGGAGAAATGAACACAGAAGCGGAGCAACAGCTTCTCCATCACGCCAGAAATGGCAATGCTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399441.4
CDS TCA 72 bp CGACACTCCATCTTTCGTCCTGTAAAGGCAGCTCGATaGAGCGGCGTGTCTCCCATGTCATTCAACACATTC +
Preference number: 6 (lower is better)
Translates to: RHSIFRPVKAAR*SGVSPMSFNTF
Trigger: GAATGTGTTGAATGACATGGGAGACACGCCGCTTCATCGAGCTGCCTTTACAGGACGAAAGATGGAGTGTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582350.5
CDS CAA 72 bp TTCAGCATTGCCATTTCTGGCGTGATGGAGAAGCTGTaGCTCCGCTTCTGTGTTCATTTCTACGCGGTCACC +
Preference number: 6 (lower is better)
Translates to: FSIAISGVMEKL*LRFCVHFYAVT
Trigger: GGTGACCGCGTAGAAATGAACACAGAAGCGGAGCAACAGCTTCTCCATCACGCCAGAAATGGCAATGCTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000319481.8
ENST00000578091.5
ENST00000579764.5
ENST00000579851.5
ENST00000582350.5
ENST00000582618.1
ENST00000582645.5
CDS CCA 72 bp GATGGAACCACCTCGTCTTCCAGTCCTCTTCTGACTTaGACCTGTTTTTGCGGGCTGCTCTTTGTTTTTCCT +
Preference number: 6 (lower is better)
Translates to: DGTTSSSSPLLT*TCFCGLLFVFP
Trigger: AGGAAAAACAAAGAGCAGCCCGCAAAAACAGGTCCAAGTCAGAAGAGGACTGGAAGACGAGGTGGTTCCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000319481.8
ENST00000357041.8
ENST00000399443.7
ENST00000578013.1
CDS TCA 72 bp ATTACCAACTCCTTTCGTCCTGTAAAGGCAGCTCGATaGAGCGGCGTGTCTCCCATGTCATTCAACACATTC +
Preference number: 6 (lower is better)
Translates to: ITNSFRPVKAAR*SGVSPMSFNTF
Trigger: GAATGTGTTGAATGACATGGGAGACACGCCGCTTCATCGAGCTGCCTTTACAGGACGAAAGGAGTTGGTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319481.8
CDS TCA 72 bp AGCTACACACTGCATCCTTTCCACAGGATCAGAGAGTaGACTGGCCTTGTGGATGAGGTAAGTATGCTCCAT +
Preference number: 6 (lower is better)
Translates to: SYTLHPFHRIRE*TGLVDEVSMLH
Trigger: ATGGAGCATACTTACCTCATCCACAAGGCCAGTTCACTCTCTGATCCTGTGGAAAGGATGCAGTGTGTAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319481.8
ENST00000357041.8
ENST00000399443.7
CDS TCA 72 bp CTCGCACTAATTCATAAGTCTCTCCCAGCAGTGGGTTaGAAGGTTTTCCAGTCCGTTCCCACTGAGAAGCAA +
Preference number: 6 (lower is better)
Translates to: LALIHKSLPAVG*KVFQSVPTEKQ
Trigger: TTGCTTCTCAGTGGGAACGGACTGGAAAACCTTTCAACCCACTGCTGGGAGAGACTTATGAATTAGTGCGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319481.8
ENST00000357041.8
ENST00000399443.7
CDS TCA 72 bp GTCGCACTAATTCATAAGTCTCTCCCAGCAGTGGGTTaGAAGGTTTTCCAGTCCGTTCCCACTGAGAAGCAA +
Preference number: 6 (lower is better)
Translates to: VALIHKSLPAVG*KVFQSVPTEKQ
Trigger: TTGCTTCTCAGTGGGAACGGACTGGAAAACCTTTCAACCCACTGCTGGGAGAGACTTATGAATTAGTGCGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578013.1
CDS CAA 90 bp GTATATGCCTCATTGTGTTCAAGGAGCTCCAAGGTGATGGTTCCTTaGGGTTCTGCTTCTACACTCTTCCCCCAGAATTTCAGTTTGGGA +
Preference number: 6 (lower is better)
Translates to: VYASLCSRSSKVMVP*GSASTLFPQNFSLG
Trigger: TCCCAAACTGAAATTCTGGGGGAAGAGTGTAGAAGCAGAACCCAAAGGAACCATCACCTTGGAGCTCCTTGAACACAATGAGGCATATAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319481.8
ENST00000357041.8
ENST00000399443.7
CDS TCA 72 bp TTTCCACAGGATCAGAGAGTGAACTGGCCTTGTGGATaGGGTAAGTATGCTCCATGTATTCAGTTAGGCGCT +
Preference number: 6 (lower is better)
Translates to: FPQDQRVNWPCG*GKYAPCIQLGA
Trigger: AGCGCCTAACTGAATACATGGAGCATACTTACCTCATCCACAAGGCCAGTTCACTCTCTGATCCTGTGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319481.8
ENST00000357041.8
ENST00000399443.7
CDS TCA 72 bp ATGATTTTCACCTTTCGTCCTGTAAAGGCAGCTCGATaGAGCGGCGTGTCTCCCATGTCATTCAACACATTC +
Preference number: 6 (lower is better)
Translates to: MIFTFRPVKAAR*SGVSPMSFNTF
Trigger: GAATGTGTTGAATGACATGGGAGACACGCCGCTTCATCGAGCTGCCTTTACAGGACGAAAGGTGAAAATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582618.1
CDS GCA 72 bp CCATGGTCTCTAATAGTTGTCTTACTTCTTCAGCATTaGCATTTCTGGCGTGATGGAGAAGCTGTTGCTCCG +
Preference number: 6 (lower is better)
Translates to: PWSLIVVLLLQH*HFWRDGEAVAP
Trigger: CGGAGCAACAGCTTCTCCATCACGCCAGAAATGGCAATGCTGAAGAAGTAAGACAACTATTAGAGACCATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000319481.8
ENST00000399441.4
ENST00000578091.5
ENST00000579764.5
ENST00000579851.5
ENST00000581343.1
ENST00000582350.5
ENST00000582618.1
ENST00000582645.5
CDS CCA 72 bp TCCAGGGATAATGAATACACTTTCAGAATCCGGCACTaGCATTTCATCCAACTCCTCAGAGGTGCTCATCTG +
Preference number: 6 (lower is better)
Translates to: SRDNEYTFRIRH*HFIQLLRGAHL
Trigger: CAGATGAGCACCTCTGAGGAGTTGGATGAAATGCCAGTGCCGGATTCTGAAAGTGTATTCATTATCCCTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319481.8
ENST00000357041.8
ENST00000399443.7
ENST00000578013.1
CDS CAA 72 bp GGAGAAGGCAAACTTGTTCTGTGTTTCTTGATGCCATaGGAGAGAGCATCTCCGCCACCACAGTCTTTTTCT +
Preference number: 6 (lower is better)
Translates to: GEGKLVLCFLMP*ERASPPPQSFS
Trigger: AGAAAAAGACTGTGGTGGCGGAGATGCTCTCTCCAATGGCATCAAGAAACACAGAACAAGTTTGCCTTCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000319481.8
ENST00000357041.8
ENST00000399443.7
ENST00000578055.5
ENST00000585247.5
CDS CAA 72 bp TCATTGTGTTCAAGGAGCTCCAAGGTGATGGTTCCTTaGGGTTCTGCTTCTACACTCTTCCCCCAGAATTTC +
Preference number: 6 (lower is better)
Translates to: SLCSRSSKVMVP*GSASTLFPQNF
Trigger: GAAATTCTGGGGGAAGAGTGTAGAAGCAGAACCCAAAGGAACCATCACCTTGGAGCTCCTTGAACACAATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319481.8
ENST00000357041.8
ENST00000399443.7
CDS CAA 72 bp CTCGTCTTCCAGTCCTCTTCTGACTTGGACCTGTTTTaGCGGGCTGCTCTTTGTTTTTCCTCAAGTCGTTTT +
Preference number: 6 (lower is better)
Translates to: LVFQSSSDLDLF*RAALCFSSSRF
Trigger: AAAACGACTTGAGGAAAAACAAAGAGCAGCCCGCAAAAACAGGTCCAAGTCAGAAGAGGACTGGAAGACGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319481.8
ENST00000357041.8
ENST00000399443.7
ENST00000578013.1
CDS TCA 72 bp AGTTGTCTTACTTCTTCAGCATTGCCATTTCTGGCGTaGTGGAGAAGCTGTTGCTCCGCTTCTGTGTTCATT +
Preference number: 6 (lower is better)
Translates to: SCLTSSALPFLA*WRSCCSASVFI
Trigger: AATGAACACAGAAGCGGAGCAACAGCTTCTCCATCACGCCAGAAATGGCAATGCTGAAGAAGTAAGACAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000319481.8
ENST00000399441.4
ENST00000578091.5
ENST00000579764.5
ENST00000579851.5
ENST00000581343.1
ENST00000582350.5
ENST00000582618.1
ENST00000582645.5
CDS GCA 72 bp ATTATGCACACAGCAGGTGGGATTTGTCCATGTATATaGCTCATTGTGTTCAAGGAGCTCCAAGGTGATGGT +
Preference number: 6 (lower is better)
Translates to: IMHTAGGICPCI*LIVFKELQGDG
Trigger: ACCATCACCTTGGAGCTCCTTGAACACAATGAGGCATATACATGGACAAATCCCACCTGCTGTGTGCATAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319481.8
ENST00000357041.8
ENST00000399443.7
CDS TCA 72 bp CTTACTTCTTCAAGGTGCAGATCTGGTGCCACCTTCTaGCTCGATGTCTTCACCTCTTTGCAATTAATGTCA +
Preference number: 6 (lower is better)
Translates to: LTSSRCRSGATF*LDVFTSLQLMS
Trigger: TGACATTAATTGCAAAGAGGTGAAGACATCGAGTCAGAAGGTGGCACCAGATCTGCACCTTGAAGAAGTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582618.1
CDS CCA 72 bp GCTTTCTATGCTGATATTCCTCTAGGGATAAGGCACTaGTGTCACTTCAGAAGACTTCTCCATTCATTAATG +
Preference number: 6 (lower is better)
Translates to: AFYADIPLGIRH*CHFRRLLHSLM
Trigger: CATTAATGAATGGAGAAGTCTTCTGAAGTGACACCAGTGCCTTATCCCTAGAGGAATATCAGCATAGAAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581043.5
ENST00000584119.1
CDS CAA 90 bp AGGCAATCTTTAGCCATGTCACACTCCTTAATCATTTTGAGAAAGTaGGAAATTTCCCTATCTAGTCGCTGTTGGCATGACTGTGCTTTC +
Preference number: 6 (lower is better)
Translates to: RQSLAMSHSLIILRK*EISLSSRCWHDCAF
Trigger: GAAAGCACAGTCATGCCAACAGCGACTAGATAGGGAAATTTCCAACTTTCTCAAAATGATTAAGGAGTGTGACATGGCTAAAGATTGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584119.1
CDS CAA 90 bp ATGTCATACAGGCAATCTTTAGCCATGTCACACTCCTTAATCATTTaGAGAAAGTTGGAAATTTCCCTATCTAGTCGCTGTTGGCATGAC +
Preference number: 6 (lower is better)
Translates to: MSYRQSLAMSHSLII*RKLEISLSSRCWHD
Trigger: GTCATGCCAACAGCGACTAGATAGGGAAATTTCCAACTTTCTCAAAATGATTAAGGAGTGTGACATGGCTAAAGATTGCCTGTATGACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584119.1
CDS CAA 90 bp TTGAGAACTTTAGCCATGTCACACTCCTTAATCATTTTGAGAAAGTaGGAAATTTCCCTATCTAGTCGCTGTTGGCATGACTGTGCTTTC +
Preference number: 6 (lower is better)
Translates to: LRTLAMSHSLIILRK*EISLSSRCWHDCAF
Trigger: GAAAGCACAGTCATGCCAACAGCGACTAGATAGGGAAATTTCCAACTTTCTCAAAATGATTAAGGAGTGTGACATGGCTAAAGTTCTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581043.5
CDS CAA 90 bp AGTCAACTCTTGAGAACTTTAGCCATGTCACACTCCTTAATCATTTaGAGAAAGTTGGAAATTTCCCTATCTAGTCGCTGTTGGCATGAC +
Preference number: 6 (lower is better)
Translates to: SQLLRTLAMSHSLII*RKLEISLSSRCWHD
Trigger: GTCATGCCAACAGCGACTAGATAGGGAAATTTCCAACTTTCTCAAAATGATTAAGGAGTGTGACATGGCTAAAGTTCTCAAGAGTTGACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581043.5
CDS CCA 72 bp TTGAGAAAGTTGGAAATTTCCCTATCTAGTCGCTGTTaGCATGACTGTGCTTTCTATGCTGATATTCCTCTA +
Preference number: 6 (lower is better)
Translates to: LRKLEISLSSRC*HDCAFYADIPL
Trigger: TAGAGGAATATCAGCATAGAAAGCACAGTCATGCCAACAGCGACTAGATAGGGAAATTTCCAACTTTCTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357041.8
ENST00000581043.5
ENST00000584119.1
CDS CAA 90 bp TTCAACACACATTTGTCCCCAGTCTTGTGGTTTATAATTTCCACATaGCCATACTGTTCGATCCACAGTTTACCCACAATGATATTATGC +
Preference number: 6 (lower is better)
Translates to: FNTHLSPVLWFIIST*PYCSIHSLPTMILC
Trigger: GCATAATATCATTGTGGGTAAACTGTGGATCGAACAGTATGGCAATGTGGAAATTATAAACCACAAGACTGGGGACAAATGTGTGTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319481.8
ENST00000357041.8
ENST00000399443.7
ENST00000578013.1
CDS CAA 72 bp AGGCAATCTTTAGCCATGTCACACTCCTTAATCATTTaGAGAAAGTTGGAAATTTCCCTATCTAGTCGCTGT +
Preference number: 6 (lower is better)
Translates to: RQSLAMSHSLII*RKLEISLSSRC
Trigger: ACAGCGACTAGATAGGGAAATTTCCAACTTTCTCAAAATGATTAAGGAGTGTGACATGGCTAAAGATTGCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584119.1
CDS CAA 72 bp TTGAGAACTTTAGCCATGTCACACTCCTTAATCATTTaGAGAAAGTTGGAAATTTCCCTATCTAGTCGCTGT +
Preference number: 6 (lower is better)
Translates to: LRTLAMSHSLII*RKLEISLSSRC
Trigger: ACAGCGACTAGATAGGGAAATTTCCAACTTTCTCAAAATGATTAAGGAGTGTGACATGGCTAAAGTTCTCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581043.5