RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OSBPL10 (Homo sapiens)

Ensembl gene IDs: ENSG00000144645

Ensembl transcript IDs: ENST00000396556.7, ENST00000428241.1, ENST00000429492.6, ENST00000438237.6, ENST00000452791.1, ENST00000463504.5, ENST00000465626.1, ENST00000466604.5, ENST00000467598.5, ENST00000467647.1, ENST00000467955.5, ENST00000469557.1, ENST00000472175.1, ENST00000479173.1, ENST00000479396.1, ENST00000480671.5, ENST00000485205.5, ENST00000490009.1, ENST00000673388.1

Found 673 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGGGAAAAGGGGAAGCAAGGATAACCGCAGCCACTCTGTGTGTCTaGCGTGTCTTAATACCTCACACGCAGGCCAGGCTGCTGGCCTCA +
Preference number: 1 (lower is better)
Translates to: QGKGEARITAATLCV*RVLIPHTQARLLAS
Trigger: TGAGGCCAGCAGCCTGGCCTGCGTGTGAGGTATTAAGACACGGCAGACACACAGAGTGGCTGCGGTTATCCTTGCTTCCCCTTTTCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429492.6
3UTR CCA 90 bp ATGACTAGCGCTGTGACCATGAGAGACGGGTGGAAAACTCCTTGGTaGGCCTTGGCTCTTAGTTGTCCCAGAGGTGCTCCATCCTGCAAG +
Preference number: 1 (lower is better)
Translates to: MTSAVTMRDGWKTPW*ALALSCPRGAPSCK
Trigger: CTTGCAGGATGGAGCACCTCTGGGACAACTAAGAGCCAAGGCCCACCAAGGAGTTTTCCACCCGTCTCTCATGGTCACAGCGCTAGTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
3UTR TCA 90 bp TGCAGTCCCATCGCGATCCCTCACAGGCAGGCTGACATGCTTTTCTaGCATAGGGATACTGGAGGGGAAGTGTCAGTTGCTCAGTTCTGC +
Preference number: 1 (lower is better)
Translates to: CSPIAIPHRQADMLF*HRDTGGEVSVAQFC
Trigger: GCAGAACTGAGCAACTGACACTTCCCCTCCAGTATCCCTATGTCAGAAAAGCATGTCAGCCTGCCTGTGAGGGATCGCGATGGGACTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429492.6
3UTR GCA 90 bp ATCCAGTCTGCAGTCCCATCGCGATCCCTCACAGGCAGGCTGACATaGTTTTCTGACATAGGGATACTGGAGGGGAAGTGTCAGTTGCTC +
Preference number: 1 (lower is better)
Translates to: IQSAVPSRSLTGRLT*FSDIGILEGKCQLL
Trigger: GAGCAACTGACACTTCCCCTCCAGTATCCCTATGTCAGAAAAGCATGTCAGCCTGCCTGTGAGGGATCGCGATGGGACTGCAGACTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429492.6
3UTR GCA 90 bp TTATCACTGGAAGATGAGTGGCATCTGCCCCAGCCCTCACCGGCCTaGTCTTCATTGATGTTGCTGGGTTCCTGTGGGCCTGCTTTAAGA +
Preference number: 1 (lower is better)
Translates to: LSLEDEWHLPQPSPA*SSLMLLGSCGPALR
Trigger: TCTTAAAGCAGGCCCACAGGAACCCAGCAACATCAATGAAGAGCAGGCCGGTGAGGGCTGGGGCAGATGCCACTCATCTTCCAGTGATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429492.6
3UTR CCA 90 bp CCTTGGCTCTTAGTTGTCCCAGAGGTGCTCCATCCTGCAAGGCTCTaGCATAAATCTTTAACAGCTTCCTGCCAACCCCCATCCAGCAGG +
Preference number: 1 (lower is better)
Translates to: PWLLVVPEVLHPARL*HKSLTASCQPPSSR
Trigger: CCTGCTGGATGGGGGTTGGCAGGAAGCTGTTAAAGATTTATGCCAGAGCCTTGCAGGATGGAGCACCTCTGGGACAACTAAGAGCCAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
3UTR GCA 90 bp AAACCTGTCCTGAAGCCTTGTCCAAAGCTGGAGTCAGAACCGAGCTaGCCTAGTCCATCCCTTCCCCTGCCTGGTATTTATCCAGTCTTG +
Preference number: 1 (lower is better)
Translates to: KPVLKPCPKLESEPS*PSPSLPLPGIYPVL
Trigger: CAAGACTGGATAAATACCAGGCAGGGGAAGGGATGGACTAGGGCAGCTCGGTTCTGACTCCAGCTTTGGACAAGGCTTCAGGACAGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429492.6
3UTR CCA 90 bp TGCTTCCCAATCCCTCCACAACTTCAAGAGCATAAGGGCTTCAGCTaGGCACACAGTGCCCTGCCCACTTGCCCAGATATTATTTCTAGC +
Preference number: 1 (lower is better)
Translates to: CFPIPPQLQEHKGFS*AHSALPTCPDIISS
Trigger: GCTAGAAATAATATCTGGGCAAGTGGGCAGGGCACTGTGTGCCCAGCTGAAGCCCTTATGCTCTTGAAGTTGTGGAGGGATTGGGAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429492.6
3UTR CCA 90 bp CCAGCCCTCACCGGCCTGCTCTTCATTGATGTTGCTGGGTTCCTGTaGGCCTGCTTTAAGACGTGTGGCTCCTACATTTTCATAATTTCC +
Preference number: 1 (lower is better)
Translates to: PALTGLLFIDVAGFL*ACFKTCGSYIFIIS
Trigger: GGAAATTATGAAAATGTAGGAGCCACACGTCTTAAAGCAGGCCCACAGGAACCCAGCAACATCAATGAAGAGCAGGCCGGTGAGGGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429492.6
3UTR GCA 90 bp CAGTGTGCTTTCCAGAGGGGATTGAAGTATACCCAGCCATCGCCCTaGAAGAGAAGAAAGGAGGCATTATTACATGGAGACCTCTCAACA +
Preference number: 1 (lower is better)
Translates to: QCAFQRGLKYTQPSP*KRRKEALLHGDLST
Trigger: TGTTGAGAGGTCTCCATGTAATAATGCCTCCTTTCTTCTCTTGCAGGGCGATGGCTGGGTATACTTCAATCCCCTCTGGAAAGCACACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429492.6
3UTR CCA 90 bp ATAACCACCCATACTTCTACCAGGAATGAGCCACTTTCTCCCTTATaGACAGTGATCGGGCCATGCCAGTTCACCTTCATTTTGACAGGA +
Preference number: 1 (lower is better)
Translates to: ITTHTSTRNEPLSPL*TVIGPCQFTFILTG
Trigger: TCCTGTCAAAATGAAGGTGAACTGGCATGGCCCGATCACTGTCCATAAGGGAGAAAGTGGCTCATTCCTGGTAGAAGTATGGGTGGTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
3UTR TCA 90 bp CACCCAGATGCTTTAAAGACTGTGGACCTAAGTAGGCTTCTATTGTaGCTTCTGGCAGTGACTCTTCTCGTGAAACAACACTCACTGGGT +
Preference number: 1 (lower is better)
Translates to: HPDALKTVDLSRLLL*LLAVTLLVKQHSLG
Trigger: ACCCAGTGAGTGTTGTTTCACGAGAAGAGTCACTGCCAGAAGTCACAATAGAAGCCTACTTAGGTCCACAGTCTTTAAAGCATCTGGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429492.6
3UTR GCA 90 bp TGTCTCAGCCTCCTGAGTAGCTGGAACTATAGGCATGTGACACTGTaGCTGGCACTTACACTTTTATATGCCAACATTGAACAATCCAAA +
Preference number: 1 (lower is better)
Translates to: CLSLLSSWNYRHVTL*LALTLLYANIEQSK
Trigger: TTTGGATTGTTCAATGTTGGCATATAAAAGTGTAAGTGCCAGGCACAGTGTCACATGCCTATAGTTCCAGCTACTCAGGAGGCTGAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429492.6
3UTR GCA 90 bp AGGGGCACAATAGTGGCTTTTAAGGTACTGGTAAACAGGTTTCTTTaGTTAAGCAGTGGCTACAAGGGTATTTATAATTATTCCTGGAGT +
Preference number: 1 (lower is better)
Translates to: RGTIVAFKVLVNRFL*LSSGYKGIYNYSWS
Trigger: ACTCCAGGAATAATTATAAATACCCTTGTAGCCACTGCTTAAGCAAAGAAACCTGTTTACCAGTACCTTAAAAGCCACTATTGTGCCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429492.6
3UTR CCA 90 bp GTTCAGATGACTCTTATTCCTTACATGTTCCCAGCCCTTCTGTTATaGGCATACTGGCTTTTCTTAAACTCAGGAAGAACTGTAAATGTT +
Preference number: 1 (lower is better)
Translates to: VQMTLIPYMFPALLL*AYWLFLNSGRTVNV
Trigger: AACATTTACAGTTCTTCCTGAGTTTAAGAAAAGCCAGTATGCCCATAACAGAAGGGCTGGGAACATGTAAGGAATAAGAGTCATCTGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429492.6
3UTR CCA 90 bp TTTCTCAAAATAGCATTTGTTCCACTTTCTCTGTCAGAAATAAGATaGTTCCAGATACTTGATTCACCCAGATGCTTTAAAGACTGTGGA +
Preference number: 1 (lower is better)
Translates to: FLKIAFVPLSLSEIR*FQILDSPRCFKDCG
Trigger: TCCACAGTCTTTAAAGCATCTGGGTGAATCAAGTATCTGGAACCATCTTATTTCTGACAGAGAAAGTGGAACAAATGCTATTTTGAGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429492.6
3UTR CAA 90 bp AGCGCTGTGACCATGAGAGACGGGTGGAAAACTCCTTGGTGGGCCTaGGCTCTTAGTTGTCCCAGAGGTGCTCCATCCTGCAAGGCTCTG +
Preference number: 2 (lower is better)
Translates to: SAVTMRDGWKTPWWA*ALSCPRGAPSCKAL
Trigger: CAGAGCCTTGCAGGATGGAGCACCTCTGGGACAACTAAGAGCCAAGGCCCACCAAGGAGTTTTCCACCCGTCTCTCATGGTCACAGCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
3UTR-3UTR CCA 90 bp AGGAATGAGCCACTTTCTCCCTTATGGACAGTGATCGGGCCATGCCAGTTCACCAGCCTTGTCCAAAGCTaGAGTCAGAACCGAGCTGCC +
Preference number: 2 (lower is better)
Translates to: RNEPLSPLWTVIGPCQFTSLVQS*SQNRAA
Trigger: GGCAGCTCGGTTCTGACTCCAGCTTTGGACAAGGCT...GGTGAACTGGCATGGCCCGATCACTGTCCATAAGGGAGAAAGTGGCTCATTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429492.6
3UTR-3UTR TCA 90 bp TCTGAACCAGAATCCAACCTTGAAATCTCCTTCAGTCCACAGCCTGACTCTGGGCGGCCTGCTCTTCATTaGTGTTGCTGGGTTCCTGTG +
Preference number: 2 (lower is better)
Translates to: SEPESNLEISFSPQPDSGRPALH*CCWVPV
Trigger: CACAGGAACCCAGCAACATCAATGAAGAGCAGGCCG...CCCAGAGTCAGGCTGTGGACTGAAGGAGATTTCAAGGTTGGATTCTGGTTCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429492.6
3UTR-3UTR GCA 90 bp AGGAATGAGCCACTTTCTCCCTTATGGACAGTGATCGGGCCATGCCAGTTCACCGTGTGTACACACACGTaGCCCGAATGGCTCTTGAAT +
Preference number: 2 (lower is better)
Translates to: RNEPLSPLWTVIGPCQFTVCTHT*PEWLLN
Trigger: ATTCAAGAGCCATTCGGGGCACGTGTGTGTACACAC...GGTGAACTGGCATGGCCCGATCACTGTCCATAAGGGAGAAAGTGGCTCATTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
3UTR-3UTR GCA 90 bp TCTTTCTTGGGCGCGGACAGACAAAACACTGAGGTGGGGAGGGAGGTGAGAATCACAGTGATCGGGCCATaGCAGTTCACCTTCATTTTG +
Preference number: 2 (lower is better)
Translates to: SFLGADRQNTEVGREVRITVIGP*QFTFIL
Trigger: CAAAATGAAGGTGAACTGGCATGGCCCGATCACTGT...GATTCTCACCTCCCTCCCCACCTCAGTGTTTTGTCTGTCCGCGCCCAAGAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
3UTR-3UTR TCA 90 bp TCTTTCTTGGGCGCGGACAGACAAAACACTGAGGTGGGGAGGGAGGTGAGAATCTACTTCTACCAGGAATaGGCCACTTTCTCCCTTATG +
Preference number: 2 (lower is better)
Translates to: SFLGADRQNTEVGREVRIYFYQE*ATFSLM
Trigger: CATAAGGGAGAAAGTGGCTCATTCCTGGTAGAAGTA...GATTCTCACCTCCCTCCCCACCTCAGTGTTTTGTCTGTCCGCGCCCAAGAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
3UTR-3UTR TCA 90 bp TCTGAACCAGAATCCAACCTTGAAATCTCCTTCAGTCCACAGCCTGACTCTGGGTTTATCACTGGAAGATaGGTGGCATCTGCCCCAGCC +
Preference number: 2 (lower is better)
Translates to: SEPESNLEISFSPQPDSGFITGR*VASAPA
Trigger: GGCTGGGGCAGATGCCACTCATCTTCCAGTGATAAA...CCCAGAGTCAGGCTGTGGACTGAAGGAGATTTCAAGGTTGGATTCTGGTTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429492.6
3UTR-3UTR GCA 90 bp TTCCCCAAACTAAATACAAGATTGAGGCTGTGGTTGTGCATGTTTTCATGTGCAAAGATGAGTGGCATCTaGCCCAGCCCTCACCGGCCT +
Preference number: 2 (lower is better)
Translates to: FPKLNTRLRLWLCMFSCAKMSGI*PSPHRP
Trigger: AGGCCGGTGAGGGCTGGGGCAGATGCCACTCATCTT...TGCACATGAAAACATGCACAACCACAGCCTCAATCTTGTATTTAGTTTGGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429492.6
3UTR-3UTR CCA 90 bp TCCCTTATGGACAGTGATCGGGCCATGCCAGTTCACCTTCATTTTGACAGGAGTAAAACAGGGCTATACTaGAAAGCTCTGCACCTCCAC +
Preference number: 2 (lower is better)
Translates to: SLMDSDRAMPVHLHFDRSKTGLY*KALHLH
Trigger: GTGGAGGTGCAGAGCTTTCCAGTATAGCCCTGTTTT...ACTCCTGTCAAAATGAAGGTGAACTGGCATGGCCCGATCACTGTCCATAAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
3UTR-3UTR CCA 90 bp TCTGAACCAGAATCCAACCTTGAAATCTCCTTCAGTCCACAGCCTGACTCTGGGTGGAAAACTCCTTGGTaGGCCTTGGCTCTTAGTTGT +
Preference number: 2 (lower is better)
Translates to: SEPESNLEISFSPQPDSGWKTPW*ALALSC
Trigger: ACAACTAAGAGCCAAGGCCCACCAAGGAGTTTTCCA...CCCAGAGTCAGGCTGTGGACTGAAGGAGATTTCAAGGTTGGATTCTGGTTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429492.6
3UTR-3UTR TCA 90 bp ATAGTGGCTTTTAAGGTACTGGTAAACAGGTTTCTTTGCTTAAGCAGTGGCTACCTCCCTTATGGACAGTaGTCGGGCCATGCCAGTTCA +
Preference number: 2 (lower is better)
Translates to: IVAFKVLVNRFLCLSSGYLPYGQ*SGHASS
Trigger: TGAACTGGCATGGCCCGATCACTGTCCATAAGGGAG...GTAGCCACTGCTTAAGCAAAGAAACCTGTTTACCAGTACCTTAAAAGCCACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429492.6
3UTR-3UTR GCA 90 bp TCCCTTATGGACAGTGATCGGGCCATGCCAGTTCACCTTCATTTTGACAGGAGTCAAGGTCTCAGTGAATaGCAACAAAACCCTGATACT +
Preference number: 2 (lower is better)
Translates to: SLMDSDRAMPVHLHFDRSQGLSE*QQNPDT
Trigger: AGTATCAGGGTTTTGTTGGCATTCACTGAGACCTTG...ACTCCTGTCAAAATGAAGGTGAACTGGCATGGCCCGATCACTGTCCATAAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
3UTR-3UTR GCA 90 bp CATAAATCTTTAACAGCTTCCTGCCAACCCCCATCCAGCAGGAAATACTTGCTTGTCCATCCCTTCCCCTaGCTGGTATTTATCCAGTCT +
Preference number: 2 (lower is better)
Translates to: HKSLTASCQPPSSRKYLLVHPFP*LVFIQS
Trigger: AGACTGGATAAATACCAGGCAGGGGAAGGGATGGAC...AAGCAAGTATTTCCTGCTGGATGGGGGTTGGCAGGAAGCTGTTAAAGATTTATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000429492.6
3UTR-3UTR CCA 90 bp GTTAAGACAATGCTACTCAAAGGGATCTACAGATTCAATGCAATCCCTATCAAACATAAGGGCTTCAGCTaGGCACACAGTGCCCTGCCC +
Preference number: 2 (lower is better)
Translates to: VKTMLLKGIYRFNAIPIKHKGFS*AHSALP
Trigger: GGGCAGGGCACTGTGTGCCCAGCTGAAGCCCTTATG...TTTGATAGGGATTGCATTGAATCTGTAGATCCCTTTGAGTAGCATTGTCTTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429492.6
3UTR-3UTR CCA 90 bp ACGTATACGGTGTGTACACACACGTGCCCCGAATGGCTCTTGAATAAATTCATTAAAACAGGGCTATACTaGAAAGCTCTGCACCTCCAC +
Preference number: 2 (lower is better)
Translates to: TYTVCTHTCPEWLLNKFIKTGLY*KALHLH
Trigger: GTGGAGGTGCAGAGCTTTCCAGTATAGCCCTGTTTT...AATGAATTTATTCAAGAGCCATTCGGGGCACGTGTGTGTACACACCGTATACGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
3UTR-3UTR CCA 90 bp AAATCTTTAACAGCTTCCTGCCAACCCCCATCCAGCAGGAAATACTTGCTTATCTCCTCTAGCAGAGTGTaGGGGTGCACTTTTCATAGT +
Preference number: 2 (lower is better)
Translates to: KSLTASCQPPSSRKYLLISSSRV*GCTFHS
Trigger: ACTATGAAAAGTGCACCCCCACACTCTGCTAGAGGA...GATAAGCAAGTATTTCCTGCTGGATGGGGGTTGGCAGGAAGCTGTTAAAGATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
3UTR-3UTR GCA 90 bp TTCCCCAAACTAAATACAAGATTGAGGCTGTGGTTGTGCATGTTTTCATGTGCAGTGTGTACACACACGTaGCCCGAATGGCTCTTGAAT +
Preference number: 2 (lower is better)
Translates to: FPKLNTRLRLWLCMFSCAVCTHT*PEWLLN
Trigger: ATTCAAGAGCCATTCGGGGCACGTGTGTGTACACAC...TGCACATGAAAACATGCACAACCACAGCCTCAATCTTGTATTTAGTTTGGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
3UTR-3UTR CCA 90 bp CTGGTCTTAAGAAAGCAGACAAAAGGCACAAAATTAGTATTACTACAGAGAAGCACCCAGGTGTTGAGATaGCCTGTGAGGCACTCCTCA +
Preference number: 2 (lower is better)
Translates to: LVLRKQTKGTKLVLLQRSTQVLR*PVRHSS
Trigger: TGAGGAGTGCCTCACAGGCCATCTCAACACCTGGGT...GCTTCTCTGTAGTAATACTAATTTTGTGCCTTTTGTCTGCTTTCTTAAGACCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429492.6
3UTR-3UTR TCA 90 bp CTGGTCTTAAGAAAGCAGACAAAAGGCACAAAATTAGTATTACTACAGAGAAGCAGGGTCCCCACTCAGTaGCCCATAAAGGCAAAGTCT +
Preference number: 2 (lower is better)
Translates to: LVLRKQTKGTKLVLLQRSRVPTQ*PIKAKS
Trigger: AGACTTTGCCTTTATGGGTCACTGAGTGGGGACCCT...GCTTCTCTGTAGTAATACTAATTTTGTGCCTTTTGTCTGCTTTCTTAAGACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000429492.6
3UTR-3UTR GCA 90 bp CATAAATCTTTAACAGCTTCCTGCCAACCCCCATCCAGCAGGAAATACTTGCTTCAAGGTCTCAGTGAATaGCAACAAAACCCTGATACT +
Preference number: 2 (lower is better)
Translates to: HKSLTASCQPPSSRKYLLQGLSE*QQNPDT
Trigger: AGTATCAGGGTTTTGTTGGCATTCACTGAGACCTTG...AAGCAAGTATTTCCTGCTGGATGGGGGTTGGCAGGAAGCTGTTAAAGATTTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
3UTR-3UTR GCA 90 bp GTTAAGACAATGCTACTCAAAGGGATCTACAGATTCAATGCAATCCCTATCAAAAGGGGAAGTGTCAGTTaGTCAGTTCTGCCCTCCAGA +
Preference number: 2 (lower is better)
Translates to: VKTMLLKGIYRFNAIPIKRGSVS*SVLPSR
Trigger: TCTGGAGGGCAGAACTGAGCAACTGACACTTCCCCT...TTTGATAGGGATTGCATTGAATCTGTAGATCCCTTTGAGTAGCATTGTCTTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429492.6
3UTR-3UTR CCA 90 bp ATAGTGGCTTTTAAGGTACTGGTAAACAGGTTTCTTTGCTTAAGCAGTGGCTACTCCTCTAGCAGAGTGTaGGGGTGCACTTTTCATAGT +
Preference number: 2 (lower is better)
Translates to: IVAFKVLVNRFLCLSSGYSSSRV*GCTFHS
Trigger: ACTATGAAAAGTGCACCCCCACACTCTGCTAGAGGA...GTAGCCACTGCTTAAGCAAAGAAACCTGTTTACCAGTACCTTAAAAGCCACTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000429492.6
3UTR-3UTR CCA 90 bp CTGGTCTTAAGAAAGCAGACAAAAGGCACAAAATTAGTATTACTACAGAGAAGCGGGTGGAAAACTCCTTaGTGGGCCTTGGCTCTTAGT +
Preference number: 2 (lower is better)
Translates to: LVLRKQTKGTKLVLLQRSGWKTP*WALALS
Trigger: ACTAAGAGCCAAGGCCCACCAAGGAGTTTTCCACCC...GCTTCTCTGTAGTAATACTAATTTTGTGCCTTTTGTCTGCTTTCTTAAGACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
3UTR-3UTR GCA 90 bp ATAGTGGCTTTTAAGGTACTGGTAAACAGGTTTCTTTGCTTAAGCAGTGGCTACACAGGCAGGCTGACATaGTTTTCTGACATAGGGATA +
Preference number: 2 (lower is better)
Translates to: IVAFKVLVNRFLCLSSGYTGRLT*FSDIGI
Trigger: TATCCCTATGTCAGAAAAGCATGTCAGCCTGCCTGT...GTAGCCACTGCTTAAGCAAAGAAACCTGTTTACCAGTACCTTAAAAGCCACTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429492.6
3UTR-3UTR GCA 90 bp ACTGAAACCATGGAATATTTATGCAGGCGTTATGTATGTTTTAGTCACAGTGCTTCCACCCCATCAGTGTaGTTTCCAGAGGGGATTGAA +
Preference number: 2 (lower is better)
Translates to: TETMEYLCRRYVCFSHSASTPSV*FPEGIE
Trigger: TTCAATCCCCTCTGGAAAGCACACTGATGGGGTGGA...AGCACTGTGACTAAAACATACATAACGCCTGCATAAATATTCCATGGTTTCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000429492.6
3UTR-3UTR CCA 90 bp ATGCTAATACAAGGTCTCAGTGAATGCCAACAAAACCCTGATACTCTACTACTTAAAACAGGGCTATACTaGAAAGCTCTGCACCTCCAC +
Preference number: 2 (lower is better)
Translates to: MLIQGLSECQQNPDTLLLKTGLY*KALHLH
Trigger: GTGGAGGTGCAGAGCTTTCCAGTATAGCCCTGTTTT...AAGTAGTAGAGTATCAGGGTTTTGTTGGCATTCACTGAGACCTTGTATTAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
3UTR-3UTR CCA 90 bp TTCCCCAAACTAAATACAAGATTGAGGCTGTGGTTGTGCATGTTTTCATGTGCACTTGCTTATCTTTCTTaGGCGCGGACAGACAAAACA +
Preference number: 2 (lower is better)
Translates to: FPKLNTRLRLWLCMFSCALAYLS*ARTDKT
Trigger: TGTTTTGTCTGTCCGCGCCCAAGAAAGATAAGCAAG...TGCACATGAAAACATGCACAACCACAGCCTCAATCTTGTATTTAGTTTGGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
3UTR-3UTR TCA 90 bp ACTGAAACCATGGAATATTTATGCAGGCGTTATGTATGTTTTAGTCACAGTGCTCAGGAGGCAAAGCTCTaGAAGGCAATTCTTCATCAG +
Preference number: 2 (lower is better)
Translates to: TETMEYLCRRYVCFSHSAQEAKL*KAILHQ
Trigger: CTGATGAAGAATTGCCTTTCAGAGCTTTGCCTCCTG...AGCACTGTGACTAAAACATACATAACGCCTGCATAAATATTCCATGGTTTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429492.6
3UTR-3UTR TCA 90 bp CTGGTCTTAAGAAAGCAGACAAAAGGCACAAAATTAGTATTACTACAGAGAAGCTACTTCTACCAGGAATaGGCCACTTTCTCCCTTATG +
Preference number: 2 (lower is better)
Translates to: LVLRKQTKGTKLVLLQRSYFYQE*ATFSLM
Trigger: CATAAGGGAGAAAGTGGCTCATTCCTGGTAGAAGTA...GCTTCTCTGTAGTAATACTAATTTTGTGCCTTTTGTCTGCTTTCTTAAGACCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
3UTR-3UTR GCA 90 bp TTACCCACTTTAACCTTGGTGAGTGCAGTATTTAAATGTGTAATCATACTCAGATCAGTTGCTCAGTTCTaGCCTCCAGAAGGTTTCATG +
Preference number: 2 (lower is better)
Translates to: LPTLTLVSAVFKCVIILRSVAQF*PPEGFM
Trigger: CATGAAACCTTCTGGAGGGCAGAACTGAGCAACTGA...TCTGAGTATGATTACACATTTAAATACTGCACTCACCAAGGTTAAAGTGGGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429492.6
3UTR-3UTR CCA 90 bp ATTTCTCTCTCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGTGAATGCGTATTTATCCAGTCTTaGGGGCTCAGCAAGAAAAAC +
Preference number: 2 (lower is better)
Translates to: ISLSLIISWMLIQGLSECVFIQS*GLSKKN
Trigger: GTTTTTCTTGCTGAGCCCCCAAGACTGGATAAATAC...GCATTCACTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGAGAGAGAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000429492.6
3UTR-3UTR TCA 90 bp CTGGTCTTAAGAAAGCAGACAAAAGGCACAAAATTAGTATTACTACAGAGAAGCGTGCTGGTGTTCAGATaGCTCTTATTCCTTACATGT +
Preference number: 2 (lower is better)
Translates to: LVLRKQTKGTKLVLLQRSVLVFR*LLFLTC
Trigger: ACATGTAAGGAATAAGAGTCATCTGAACACCAGCAC...GCTTCTCTGTAGTAATACTAATTTTGTGCCTTTTGTCTGCTTTCTTAAGACCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429492.6
3UTR-3UTR GCA 90 bp ACTGAAACCATGGAATATTTATGCAGGCGTTATGTATGTTTTAGTCACAGTGCTAGTTACCTACTATGTTaGCCTAACTCACTTCTCAGC +
Preference number: 2 (lower is better)
Translates to: TETMEYLCRRYVCFSHSASYLLC*PNSLLS
Trigger: GCTGAGAAGTGAGTTAGGGCAACATAGTAGGTAACT...AGCACTGTGACTAAAACATACATAACGCCTGCATAAATATTCCATGGTTTCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429492.6
3UTR-3UTR GCA 90 bp GTTAAGACAATGCTACTCAAAGGGATCTACAGATTCAATGCAATCCCTATCAAAAAATTGGATCCCTTGTaGATTGCTAGTGGCATTGCA +
Preference number: 2 (lower is better)
Translates to: VKTMLLKGIYRFNAIPIKKLDPL*IASGIA
Trigger: TGCAATGCCACTAGCAATGCACAAGGGATCCAATTT...TTTGATAGGGATTGCATTGAATCTGTAGATCCCTTTGAGTAGCATTGTCTTAAC
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000429492.6
3UTR-3UTR CCA 90 bp TTCCCCAAACTAAATACAAGATTGAGGCTGTGGTTGTGCATGTTTTCATGTGCATCTCTCATCATTTCTTaGATGCTAATACAAGGTCTC +
Preference number: 2 (lower is better)
Translates to: FPKLNTRLRLWLCMFSCASLIIS*MLIQGL
Trigger: GAGACCTTGTATTAGCATCCAAGAAATGATGAGAGA...TGCACATGAAAACATGCACAACCACAGCCTCAATCTTGTATTTAGTTTGGGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
3UTR-3UTR GCA 90 bp TTACCCACTTTAACCTTGGTGAGTGCAGTATTTAAATGTGTAATCATACTCAGACAAGGTCTCAGTGAATaGCAACAAAACCCTGATACT +
Preference number: 2 (lower is better)
Translates to: LPTLTLVSAVFKCVIILRQGLSE*QQNPDT
Trigger: AGTATCAGGGTTTTGTTGGCATTCACTGAGACCTTG...TCTGAGTATGATTACACATTTAAATACTGCACTCACCAAGGTTAAAGTGGGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
3UTR-3UTR CCA 90 bp CTGGTCTTAAGAAAGCAGACAAAAGGCACAAAATTAGTATTACTACAGAGAAGCTCTCTCATCATTTCTTaGATGCTAATACAAGGTCTC +
Preference number: 2 (lower is better)
Translates to: LVLRKQTKGTKLVLLQRSSLIIS*MLIQGL
Trigger: GAGACCTTGTATTAGCATCCAAGAAATGATGAGAGA...GCTTCTCTGTAGTAATACTAATTTTGTGCCTTTTGTCTGCTTTCTTAAGACCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
3UTR TCA 72 bp ACCTGGGCAGGGCTCCCACACAGGGTCCCCACTCAGTaGCCCATAAAGGCAAAGTCTTCTCCAGGCAGCTTT +
Preference number: 3 (lower is better)
Translates to: TWAGLPHRVPTQ*PIKAKSSPGSF
Trigger: AAAGCTGCCTGGAGAAGACTTTGCCTTTATGGGTCACTGAGTGGGGACCCTGTGTGGGAGCCCTGCCCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429492.6
3UTR GCA 72 bp GGGGAAGCAAGGATAACCGCAGCCACTCTGTGTGTCTaGCGTGTCTTAATACCTCACACGCAGGCCAGGCTG +
Preference number: 3 (lower is better)
Translates to: GEARITAATLCV*RVLIPHTQARL
Trigger: CAGCCTGGCCTGCGTGTGAGGTATTAAGACACGGCAGACACACAGAGTGGCTGCGGTTATCCTTGCTTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429492.6
3UTR CCA 72 bp GCTGTGACCATGAGAGACGGGTGGAAAACTCCTTGGTaGGCCTTGGCTCTTAGTTGTCCCAGAGGTGCTCCA +
Preference number: 3 (lower is better)
Translates to: AVTMRDGWKTPW*ALALSCPRGAP
Trigger: TGGAGCACCTCTGGGACAACTAAGAGCCAAGGCCCACCAAGGAGTTTTCCACCCGTCTCTCATGGTCACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
3UTR-3UTR CAA 90 bp GGCAAAGCTCTGAAAGGCAATTCTTCATCAGTGAGGGCTCCAGCCCACCCAGGTACCTGTCCTGAAGCCTaGTCCAAAGCTGGAGTCAGA +
Preference number: 3 (lower is better)
Translates to: GKALKGNSSSVRAPAHPGTCPEA*SKAGVR
Trigger: TCTGACTCCAGCTTTGGACAAGGCTTCAGGACAGGT...ACCTGGGTGGGCTGGAGCCCTCACTGATGAAGAATTGCCTTTCAGAGCTTTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429492.6
3UTR GCA 72 bp CTGAAGCCTTGTCCAAAGCTGGAGTCAGAACCGAGCTaGCCTAGTCCATCCCTTCCCCTGCCTGGTATTTAT +
Preference number: 3 (lower is better)
Translates to: LKPCPKLESEPS*PSPSLPLPGIY
Trigger: ATAAATACCAGGCAGGGGAAGGGATGGACTAGGGCAGCTCGGTTCTGACTCCAGCTTTGGACAAGGCTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429492.6
3UTR TCA 72 bp ATCGCGATCCCTCACAGGCAGGCTGACATGCTTTTCTaGCATAGGGATACTGGAGGGGAAGTGTCAGTTGCT +
Preference number: 3 (lower is better)
Translates to: IAIPHRQADMLF*HRDTGGEVSVA
Trigger: AGCAACTGACACTTCCCCTCCAGTATCCCTATGTCAGAAAAGCATGTCAGCCTGCCTGTGAGGGATCGCGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429492.6
3UTR CCA 72 bp ACCGGCCTGCTCTTCATTGATGTTGCTGGGTTCCTGTaGGCCTGCTTTAAGACGTGTGGCTCCTACATTTTC +
Preference number: 3 (lower is better)
Translates to: TGLLFIDVAGFL*ACFKTCGSYIF
Trigger: GAAAATGTAGGAGCCACACGTCTTAAAGCAGGCCCACAGGAACCCAGCAACATCAATGAAGAGCAGGCCGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429492.6
3UTR-3UTR CAA 90 bp ACCATGAGAGACGGGTGGAAAACTCCTTGGTGGGCCTTGGCTCTTAGTTGTCCCGGTATTTATCCAGTCTaGGGGGCTCAGCAAGAAAAA +
Preference number: 3 (lower is better)
Translates to: TMRDGWKTPWWALALSCPGIYPV*GAQQEK
Trigger: TTTTTCTTGCTGAGCCCCCAAGACTGGATAAATACC...GGGACAACTAAGAGCCAAGGCCCACCAAGGAGTTTTCCACCCGTCTCTCATGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000429492.6
3UTR GCA 72 bp CAGCTTCCTGCCAACCCCCATCCAGCAGGAAATACTTaGTTATCTTTCTTGGGCGCGGACAGACAAAACACT +
Preference number: 3 (lower is better)
Translates to: QLPANPHPAGNT*LSFLGADRQNT
Trigger: AGTGTTTTGTCTGTCCGCGCCCAAGAAAGATAAGCAAGTATTTCCTGCTGGATGGGGGTTGGCAGGAAGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
3UTR-3UTR CAA 90 bp AAGGCAAGGGTGTGCATACCAGTGACTTCCAGCCCACAGGGGAACACCCAACAACTCTCTCATCATTTCTaGGATGCTAATACAAGGTCT +
Preference number: 3 (lower is better)
Translates to: KARVCIPVTSSPQGNTQQLSHHF*DANTRS
Trigger: AGACCTTGTATTAGCATCCAAGAAATGATGAGAGAG...TTGTTGGGTGTTCCCCTGTGGGCTGGAAGTCACTGGTATGCACACCCTTGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429492.6
3UTR-3UTR CAA 90 bp TCTGAACCAGAATCCAACCTTGAAATCTCCTTCAGTCCACAGCCTGACTCTGGGTCCAGCAGGAAATACTaGCTTATCTTTCTTGGGCGC +
Preference number: 3 (lower is better)
Translates to: SEPESNLEISFSPQPDSGSSRKY*LIFLGR
Trigger: GCGCCCAAGAAAGATAAGCAAGTATTTCCTGCTGGA...CCCAGAGTCAGGCTGTGGACTGAAGGAGATTTCAAGGTTGGATTCTGGTTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429492.6
3UTR GCA 72 bp GGTATTGGTGAGGATGTGGAGAAATTGGATCCCTTGTaGATTGCTAGTGGCATTGCAAAATGTGGCAGCCAG +
Preference number: 3 (lower is better)
Translates to: GIGEDVEKLDPL*IASGIAKCGSQ
Trigger: CTGGCTGCCACATTTTGCAATGCCACTAGCAATGCACAAGGGATCCAATTTCTCCACATCCTCACCAATACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429492.6
3UTR CCA 72 bp CATACTTCTACCAGGAATGAGCCACTTTCTCCCTTATaGACAGTGATCGGGCCATGCCAGTTCACCTTCATT +
Preference number: 3 (lower is better)
Translates to: HTSTRNEPLSPL*TVIGPCQFTFI
Trigger: AATGAAGGTGAACTGGCATGGCCCGATCACTGTCCATAAGGGAGAAAGTGGCTCATTCCTGGTAGAAGTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
3UTR CCA 72 bp ATCGCCCTGCAAGAGAAGAAAGGAGGCATTATTACATaGAGACCTCTCAACAGGGAAAAGGGGAAGCAAGGA +
Preference number: 3 (lower is better)
Translates to: IALQEKKGGIIT*RPLNREKGKQG
Trigger: TCCTTGCTTCCCCTTTTCCCTGTTGAGAGGTCTCCATGTAATAATGCCTCCTTTCTTCTCTTGCAGGGCGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429492.6
3UTR-3UTR CAA 90 bp AGGAATGAGCCACTTTCTCCCTTATGGACAGTGATCGGGCCATGCCAGTTCACCTTACCCACTTTAACCTaGGTGAGTGCAGTATTTAAA +
Preference number: 3 (lower is better)
Translates to: RNEPLSPLWTVIGPCQFTLPTLT*VSAVFK
Trigger: TTTAAATACTGCACTCACCAAGGTTAAAGTGGGTAA...GGTGAACTGGCATGGCCCGATCACTGTCCATAAGGGAGAAAGTGGCTCATTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
3UTR GCA 72 bp CTCCTGAGTAGCTGGAACTATAGGCATGTGACACTGTaGCTGGCACTTACACTTTTATATGCCAACATTGAA +
Preference number: 3 (lower is better)
Translates to: LLSSWNYRHVTL*LALTLLYANIE
Trigger: TTCAATGTTGGCATATAAAAGTGTAAGTGCCAGGCACAGTGTCACATGCCTATAGTTCCAGCTACTCAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429492.6
3UTR-3UTR CAA 90 bp ACGTATACGGTGTGTACACACACGTGCCCCGAATGGCTCTTGAATAAATTCATTCTCTCTCATCATTTCTaGGATGCTAATACAAGGTCT +
Preference number: 3 (lower is better)
Translates to: TYTVCTHTCPEWLLNKFILSHHF*DANTRS
Trigger: AGACCTTGTATTAGCATCCAAGAAATGATGAGAGAG...AATGAATTTATTCAAGAGCCATTCGGGGCACGTGTGTGTACACACCGTATACGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
3UTR GCA 72 bp CTGGTTAACAGATTGGAAGACTTACTGTTAAGACAATaGTACTCAAAGGGATCTACAGATTCAATGCAATCC +
Preference number: 3 (lower is better)
Translates to: LVNRLEDLLLRQ*YSKGSTDSMQS
Trigger: GGATTGCATTGAATCTGTAGATCCCTTTGAGTAGCATTGTCTTAACAGTAAGTCTTCCAATCTGTTAACCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429492.6
3UTR GCA 72 bp AAAGTTGGAGGTCTCATACTTCCTAATCTTGTAACTTaGTACAAAGCTACAGTAACTAAAAGAGTGTGGTAC +
Preference number: 3 (lower is better)
Translates to: KVGGLILPNLVT*YKATVTKRVWY
Trigger: GTACCACACTCTTTTAGTTACTGTAGCTTTGTAGCAAGTTACAAGATTAGGAAGTATGAGACCTCCAACTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429492.6
3UTR CCA 72 bp ATAGCATTTGTTCCACTTTCTCTGTCAGAAATAAGATaGTTCCAGATACTTGATTCACCCAGATGCTTTAAA +
Preference number: 3 (lower is better)
Translates to: IAFVPLSLSEIR*FQILDSPRCFK
Trigger: TTTAAAGCATCTGGGTGAATCAAGTATCTGGAACCATCTTATTTCTGACAGAGAAAGTGGAACAAATGCTAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429492.6
3UTR GCA 72 bp ATAGTGGCTTTTAAGGTACTGGTAAACAGGTTTCTTTaGTTAAGCAGTGGCTACAAGGGTATTTATAATTAT +
Preference number: 3 (lower is better)
Translates to: IVAFKVLVNRFL*LSSGYKGIYNY
Trigger: ATAATTATAAATACCCTTGTAGCCACTGCTTAAGCAAAGAAACCTGTTTACCAGTACCTTAAAAGCCACTAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR CCA 90 bp TCTTTCTTGGGCGCGGACAGACAAAACACTGAGGTGGGGAGGGAGGTGAGAATCCCTCTCCATGGTCCGTaGGCGCCCGGGACGCGGGTG +
Preference number: 4 (lower is better)
Translates to: SFLGADRQNTEVGREVRIPLHGP*APGTRV
Trigger: CACCCGCGTCCCGGGCGCCCACGGACCATGGAGAGG...GATTCTCACCTCCCTCCCCACCTCAGTGTTTTGTCTGTCCGCGCCCAAGAAAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396556.7
CDS-3UTR GCA 90 bp ACCATGAGAGACGGGTGGAAAACTCCTTGGTGGGCCTTGGCTCTTAGTTGTCCCTGCTGCTGCGGCTGCTaGTGTTGCTACCCCCGCCGC +
Preference number: 4 (lower is better)
Translates to: TMRDGWKTPWWALALSCPCCCGC*CCYPRR
Trigger: GCGGCGGGGGTAGCAACAGCAGCAGCCGCAGCAGCA...GGGACAACTAAGAGCCAAGGCCCACCAAGGAGTTTTCCACCCGTCTCTCATGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396556.7
CDS-3UTR CCA 90 bp AGGAATGAGCCACTTTCTCCCTTATGGACAGTGATCGGGCCATGCCAGTTCACCGGACTGCCCTCTCCATaGTCCGTGGGCGCCCGGGAC +
Preference number: 4 (lower is better)
Translates to: RNEPLSPLWTVIGPCQFTGLPSP*SVGARD
Trigger: GTCCCGGGCGCCCACGGACCATGGAGAGGGCAGTCC...GGTGAACTGGCATGGCCCGATCACTGTCCATAAGGGAGAAAGTGGCTCATTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396556.7
CDS-3UTR CCA 90 bp ACCATGAGAGACGGGTGGAAAACTCCTTGGTGGGCCTTGGCTCTTAGTTGTCCCCTCCTGGCTTCTGGCTaGGCTGGCCCGCCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: TMRDGWKTPWWALALSCPLLASG*AGPPGA
Trigger: TGCACCAGGCGGGCCAGCCCAGCCAGAAGCCAGGAG...GGGACAACTAAGAGCCAAGGCCCACCAAGGAGTTTTCCACCCGTCTCTCATGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR TCA 90 bp ACCATGAGAGACGGGTGGAAAACTCCTTGGTGGGCCTTGGCTCTTAGTTGTCCCCCACCCACGGGATGGTaGGAATGGACCGGGCGTAGG +
Preference number: 4 (lower is better)
Translates to: TMRDGWKTPWWALALSCPPPTGW*EWTGRR
Trigger: CCTACGCCCGGTCCATTCTCACCATCCCGTGGGTGG...GGGACAACTAAGAGCCAAGGCCCACCAAGGAGTTTTCCACCCGTCTCTCATGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR GCA 90 bp AGCTGGAGTCAGAACCGAGCTGCCCTAGTCCATCCCTTCCCCTGCCTGGTATTTCGTTCCTCCACCCGTTaGTTCTCCTCCAGGTGCCGC +
Preference number: 4 (lower is better)
Translates to: SWSQNRAALVHPFPCLVFRSSTR*FSSRCR
Trigger: GCGGCACCTGGAGGAGAAGCAACGGGTGGAGGAACG...AAATACCAGGCAGGGGAAGGGATGGACTAGGGCAGCTCGGTTCTGACTCCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR CCA 90 bp AGGGATACTGGAGGGGAAGTGTCAGTTGCTCAGTTCTGCCCTCCAGAAGGTTTCGGCTTCTGGCTGGGCTaGCCCGCCTGGTGCACACTC +
Preference number: 4 (lower is better)
Translates to: RDTGGEVSVAQFCPPEGFGFWLG*PAWCTL
Trigger: GAGTGTGCACCAGGCGGGCCAGCCCAGCCAGAAGCC...GAAACCTTCTGGAGGGCAGAACTGAGCAACTGACACTTCCCCTCCAGTATCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR CCA 90 bp GGCAAAGCTCTGAAAGGCAATTCTTCATCAGTGAGGGCTCCAGCCCACCCAGGTCGCAGGCCAGGCTGCTaGCCTCAGTACCCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: GKALKGNSSSVRAPAHPGRRPGC*PQYPSS
Trigger: TGAGGAGGGGTACTGAGGCCAGCAGCCTGGCCTGCG...ACCTGGGTGGGCTGGAGCCCTCACTGATGAAGAATTGCCTTTCAGAGCTTTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR TCA 90 bp AAGGCAAGGGTGTGCATACCAGTGACTTCCAGCCCACAGGGGAACACCCAACAATGGCCTTCCCCTGCATaGCTAGCCCTTGTGGCCCAC +
Preference number: 4 (lower is better)
Translates to: KARVCIPVTSSPQGNTQQWPSPA*LALVAH
Trigger: GTGGGCCACAAGGGCTAGTCATGCAGGGGAAGGCCA...TTGTTGGGTGTTCCCCTGTGGGCTGGAAGTCACTGGTATGCACACCCTTGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR GCA 90 bp AGCTGGAGTCAGAACCGAGCTGCCCTAGTCCATCCCTTCCCCTGCCTGGTATTTTGCTTCTCCTCCAGGTaGCGCTTCTGCTCGGTGGCT +
Preference number: 4 (lower is better)
Translates to: SWSQNRAALVHPFPCLVFCFSSR*RFCSVA
Trigger: AGCCACCGAGCAGAAGCGGCACCTGGAGGAGAAGCA...AAATACCAGGCAGGGGAAGGGATGGACTAGGGCAGCTCGGTTCTGACTCCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR CCA 90 bp TCTTTCTTGGGCGCGGACAGACAAAACACTGAGGTGGGGAGGGAGGTGAGAATCCCCGCCAGAGGTTCCTaGACTCCATGGGTCCCTGCT +
Preference number: 4 (lower is better)
Translates to: SFLGADRQNTEVGREVRIPARGS*TPWVPA
Trigger: AGCAGGGACCCATGGAGTCCAGGAACCTCTGGCGGG...GATTCTCACCTCCCTCCCCACCTCAGTGTTTTGTCTGTCCGCGCCCAAGAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR CCA 90 bp TCTTTCTTGGGCGCGGACAGACAAAACACTGAGGTGGGGAGGGAGGTGAGAATCGCCGCTTCTGCTCGGTaGCTGCGTCAATGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: SFLGADRQNTEVGREVRIAASAR*LRQCPP
Trigger: TGGGGGACATTGACGCAGCCACCGAGCAGAAGCGGC...GATTCTCACCTCCCTCCCCACCTCAGTGTTTTGTCTGTCCGCGCCCAAGAAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR TCA 90 bp AGGAATGAGCCACTTTCTCCCTTATGGACAGTGATCGGGCCATGCCAGTTCACCGGTTGGTGTATTTGCTaGGCACGCCCTCGAGCGCCG +
Preference number: 4 (lower is better)
Translates to: RNEPLSPLWTVIGPCQFTGWCIC*ARPRAP
Trigger: CGGCGCTCGAGGGCGTGCTCAGCAAATACACCAACC...GGTGAACTGGCATGGCCCGATCACTGTCCATAAGGGAGAAAGTGGCTCATTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396556.7
CDS-3UTR TCA 90 bp AGGAATGAGCCACTTTCTCCCTTATGGACAGTGATCGGGCCATGCCAGTTCACCGCCATTGGGTGTTCGTaGCAGCTGGCAGGAGAGCGG +
Preference number: 4 (lower is better)
Translates to: RNEPLSPLWTVIGPCQFTAIGCS*QLAGER
Trigger: CCGCTCTCCTGCCAGCTGTCACGAACACCCAATGGC...GGTGAACTGGCATGGCCCGATCACTGTCCATAAGGGAGAAAGTGGCTCATTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR TCA 90 bp AGGGATACTGGAGGGGAAGTGTCAGTTGCTCAGTTCTGCCCTCCAGAAGGTTTCGCCATTGGGTGTTCGTaGCAGCTGGCAGGAGAGCGG +
Preference number: 4 (lower is better)
Translates to: RDTGGEVSVAQFCPPEGFAIGCS*QLAGER
Trigger: CCGCTCTCCTGCCAGCTGTCACGAACACCCAATGGC...GAAACCTTCTGGAGGGCAGAACTGAGCAACTGACACTTCCCCTCCAGTATCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR GCA 90 bp TCTTTCTTGGGCGCGGACAGACAAAACACTGAGGTGGGGAGGGAGGTGAGAATCGGCTGGCCCGCCTGGTaGACACTCTGCTGTAACAAG +
Preference number: 4 (lower is better)
Translates to: SFLGADRQNTEVGREVRIGWPAW*TLCCNK
Trigger: CTTGTTACAGCAGAGTGTGCACCAGGCGGGCCAGCC...GATTCTCACCTCCCTCCCCACCTCAGTGTTTTGTCTGTCCGCGCCCAAGAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR CCA 90 bp TCTTTCTTGGGCGCGGACAGACAAAACACTGAGGTGGGGAGGGAGGTGAGAATCGGTGTTCGTGACAGCTaGCAGGAGAGCGGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: SFLGADRQNTEVGREVRIGVRDS*QESGKQ
Trigger: CTGCTTCCCGCTCTCCTGCCAGCTGTCACGAACACC...GATTCTCACCTCCCTCCCCACCTCAGTGTTTTGTCTGTCCGCGCCCAAGAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR CCA 90 bp AGGGATACTGGAGGGGAAGTGTCAGTTGCTCAGTTCTGCCCTCCAGAAGGTTTCGCCGCTTCTGCTCGGTaGCTGCGTCAATGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: RDTGGEVSVAQFCPPEGFAASAR*LRQCPP
Trigger: TGGGGGACATTGACGCAGCCACCGAGCAGAAGCGGC...GAAACCTTCTGGAGGGCAGAACTGAGCAACTGACACTTCCCCTCCAGTATCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR TCA 90 bp TCCCTTATGGACAGTGATCGGGCCATGCCAGTTCACCTTCATTTTGACAGGAGTGTGTGGCCCCAGCGGTaGTGGCCAGCAGTAGGTCTG +
Preference number: 4 (lower is better)
Translates to: SLMDSDRAMPVHLHFDRSVWPQR*WPAVGL
Trigger: CAGACCTACTGCTGGCCATCACCGCTGGGGCCACAC...ACTCCTGTCAAAATGAAGGTGAACTGGCATGGCCCGATCACTGTCCATAAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR GCA 90 bp AGGGATACTGGAGGGGAAGTGTCAGTTGCTCAGTTCTGCCCTCCAGAAGGTTTCAAGATGAGTGGCATCTaGCCCAGCCCTCACCGGCCT +
Preference number: 4 (lower is better)
Translates to: RDTGGEVSVAQFCPPEGFKMSGI*PSPHRP
Trigger: AGGCCGGTGAGGGCTGGGGCAGATGCCACTCATCTT...GAAACCTTCTGGAGGGCAGAACTGAGCAACTGACACTTCCCCTCCAGTATCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429492.6
3UTR CAA 72 bp ACCATGAGAGACGGGTGGAAAACTCCTTGGTGGGCCTaGGCTCTTAGTTGTCCCAGAGGTGCTCCATCCTGC +
Preference number: 4 (lower is better)
Translates to: TMRDGWKTPWWA*ALSCPRGAPSC
Trigger: GCAGGATGGAGCACCTCTGGGACAACTAAGAGCCAAGGCCCACCAAGGAGTTTTCCACCCGTCTCTCATGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR TCA 90 bp AGGAATGAGCCACTTTCTCCCTTATGGACAGTGATCGGGCCATGCCAGTTCACCAGGCAGAGGTTGCAGTaGGCAGAGATTGCGCGCCAT +
Preference number: 4 (lower is better)
Translates to: RNEPLSPLWTVIGPCQFTRQRLQ*AEIARH
Trigger: ATGGCGCGCAATCTCTGCTCACTGCAACCTCTGCCT...GGTGAACTGGCATGGCCCGATCACTGTCCATAAGGGAGAAAGTGGCTCATTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR GCA 90 bp TTTAATATTCCTACAAAAACAGGGCTATACTGGAAAGCTCTGCACCTCCACCCCCCCCGGCACGGCGGCTaGTGCTGCTGCTACAGCTCC +
Preference number: 4 (lower is better)
Translates to: FNIPTKTGLYWKALHLHPPRHGG*CCCYSS
Trigger: GGAGCTGTAGCAGCAGCAGCAGCCGCCGTGCCGGGG...GGGGTGGAGGTGCAGAGCTTTCCAGTATAGCCCTGTTTTTGTAGGAATATTAAA
56% GC, longest homopolymer 8 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000438237.6
CDS-3UTR CCA 90 bp TTTAATATTCCTACAAAAACAGGGCTATACTGGAAAGCTCTGCACCTCCACCCCGGACTGCCCTCTCCATaGTCCGTGGGCGCCCGGGAC +
Preference number: 4 (lower is better)
Translates to: FNIPTKTGLYWKALHLHPGLPSP*SVGARD
Trigger: GTCCCGGGCGCCCACGGACCATGGAGAGGGCAGTCC...GGGGTGGAGGTGCAGAGCTTTCCAGTATAGCCCTGTTTTTGTAGGAATATTAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000438237.6
CDS-3UTR CCA 90 bp AGGAATGAGCCACTTTCTCCCTTATGGACAGTGATCGGGCCATGCCAGTTCACCAGGGTCATCGGCCATTaGGTGTTCGTGACAGCTGGC +
Preference number: 4 (lower is better)
Translates to: RNEPLSPLWTVIGPCQFTRVIGH*VFVTAG
Trigger: GCCAGCTGTCACGAACACCCAATGGCCGATGACCCT...GGTGAACTGGCATGGCCCGATCACTGTCCATAAGGGAGAAAGTGGCTCATTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR CCA 90 bp ACCATGAGAGACGGGTGGAAAACTCCTTGGTGGGCCTTGGCTCTTAGTTGTCCCGGTTCCTGGACTCCATaGGTCCCTGCTTCTCAAGAG +
Preference number: 4 (lower is better)
Translates to: TMRDGWKTPWWALALSCPGSWTP*VPASQE
Trigger: CTCTTGAGAAGCAGGGACCCATGGAGTCCAGGAACC...GGGACAACTAAGAGCCAAGGCCCACCAAGGAGTTTTCCACCCGTCTCTCATGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR CCA 90 bp ACCATGAGAGACGGGTGGAAAACTCCTTGGTGGGCCTTGGCTCTTAGTTGTCCCAGCCTTGTCCAAAGCTaGAGTCAGAACCGAGCTGCC +
Preference number: 4 (lower is better)
Translates to: TMRDGWKTPWWALALSCPSLVQS*SQNRAA
Trigger: GGCAGCTCGGTTCTGACTCCAGCTTTGGACAAGGCT...GGGACAACTAAGAGCCAAGGCCCACCAAGGAGTTTTCCACCCGTCTCTCATGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR CCA 90 bp AAGGCAAGGGTGTGCATACCAGTGACTTCCAGCCCACAGGGGAACACCCAACAACTCTGGGGAGAACAGTaGTGGCTTCCTGCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: KARVCIPVTSSPQGNTQQLWGEQ*WLPALP
Trigger: AGGAAGAGCAGGAAGCCACCACTGTTCTCCCCAGAG...TTGTTGGGTGTTCCCCTGTGGGCTGGAAGTCACTGGTATGCACACCCTTGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR TCA 90 bp AGGAATGAGCCACTTTCTCCCTTATGGACAGTGATCGGGCCATGCCAGTTCACCGGTTCATCATCTCTCTaGCTTCGTGAAGCTGGCCGG +
Preference number: 4 (lower is better)
Translates to: RNEPLSPLWTVIGPCQFTGSSSL*LREAGR
Trigger: CCGGCCAGCTTCACGAAGTCAGAGAGATGATGAACC...GGTGAACTGGCATGGCCCGATCACTGTCCATAAGGGAGAAAGTGGCTCATTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR TCA 90 bp GGCAAAGCTCTGAAAGGCAATTCTTCATCAGTGAGGGCTCCAGCCCACCCAGGTCTTTCCAGAGGGGATTaGAGTATACCCAGCCATCGC +
Preference number: 4 (lower is better)
Translates to: GKALKGNSSSVRAPAHPGLSRGD*SIPSHR
Trigger: GCGATGGCTGGGTATACTTCAATCCCCTCTGGAAAG...ACCTGGGTGGGCTGGAGCCCTCACTGATGAAGAATTGCCTTTCAGAGCTTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR TCA 90 bp TCTGAACCAGAATCCAACCTTGAAATCTCCTTCAGTCCACAGCCTGACTCTGGGGGGTGTGCATACCAGTaGCTTCCAGCCCACAGGGGA +
Preference number: 4 (lower is better)
Translates to: SEPESNLEISFSPQPDSGGCAYQ*LPAHRG
Trigger: TCCCCTGTGGGCTGGAAGTCACTGGTATGCACACCC...CCCAGAGTCAGGCTGTGGACTGAAGGAGATTTCAAGGTTGGATTCTGGTTCAGA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR GCA 90 bp TTTAATATTCCTACAAAAACAGGGCTATACTGGAAAGCTCTGCACCTCCACCCCCGGCACGGCGGCTGCTaGTGCTGCTACAGCTCCGGA +
Preference number: 4 (lower is better)
Translates to: FNIPTKTGLYWKALHLHPRHGGC*CCYSSG
Trigger: TCCGGAGCTGTAGCAGCAGCAGCAGCCGCCGTGCCG...GGGGTGGAGGTGCAGAGCTTTCCAGTATAGCCCTGTTTTTGTAGGAATATTAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000438237.6
CDS-3UTR GCA 90 bp AGGAATGAGCCACTTTCTCCCTTATGGACAGTGATCGGGCCATGCCAGTTCACCACGAAGTACCTGTTCTaGCAGCCCTGGAGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: RNEPLSPLWTVIGPCQFTTKYLF*QPWRRL
Trigger: CAACCTCCTCCAGGGCTGGCAGAACAGGTACTTCGT...GGTGAACTGGCATGGCCCGATCACTGTCCATAAGGGAGAAAGTGGCTCATTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396556.7
CDS-3UTR GCA 90 bp AAGGCAAGGGTGTGCATACCAGTGACTTCCAGCCCACAGGGGAACACCCAACAATGCACAAGGTTCTTCTaGTGCCCTTCCACCTGGTTC +
Preference number: 4 (lower is better)
Translates to: KARVCIPVTSSPQGNTQQCTRFF*CPSTWF
Trigger: GAACCAGGTGGAAGGGCAGCAGAAGAACCTTGTGCA...TTGTTGGGTGTTCCCCTGTGGGCTGGAAGTCACTGGTATGCACACCCTTGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR GCA 90 bp AAGGCAAGGGTGTGCATACCAGTGACTTCCAGCCCACAGGGGAACACCCAACAAAGGGGAAGTGTCAGTTaGTCAGTTCTGCCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: KARVCIPVTSSPQGNTQQRGSVS*SVLPSR
Trigger: TCTGGAGGGCAGAACTGAGCAACTGACACTTCCCCT...TTGTTGGGTGTTCCCCTGTGGGCTGGAAGTCACTGGTATGCACACCCTTGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR GCA 90 bp TCTGAACCAGAATCCAACCTTGAAATCTCCTTCAGTCCACAGCCTGACTCTGGGAGGCTGGCCTTCCCCTaGATGACTAGCCCTTGTGGC +
Preference number: 4 (lower is better)
Translates to: SEPESNLEISFSPQPDSGRLAFP*MTSPCG
Trigger: GCCACAAGGGCTAGTCATGCAGGGGAAGGCCAGCCT...CCCAGAGTCAGGCTGTGGACTGAAGGAGATTTCAAGGTTGGATTCTGGTTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR CCA 90 bp TCTTTCTTGGGCGCGGACAGACAAAACACTGAGGTGGGGAGGGAGGTGAGAATCCCACTTTCTCCCTTATaGACAGTGATCGGGCCATGC +
Preference number: 4 (lower is better)
Translates to: SFLGADRQNTEVGREVRIPLSPL*TVIGPC
Trigger: GCATGGCCCGATCACTGTCCATAAGGGAGAAAGTGG...GATTCTCACCTCCCTCCCCACCTCAGTGTTTTGTCTGTCCGCGCCCAAGAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR CCA 90 bp ACCATGAGAGACGGGTGGAAAACTCCTTGGTGGGCCTTGGCTCTTAGTTGTCCCGGGTGGAAAACTCCTTaGTGGGCCTTGGCTCTTAGT +
Preference number: 4 (lower is better)
Translates to: TMRDGWKTPWWALALSCPGWKTP*WALALS
Trigger: ACTAAGAGCCAAGGCCCACCAAGGAGTTTTCCACCC...GGGACAACTAAGAGCCAAGGCCCACCAAGGAGTTTTCCACCCGTCTCTCATGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR CCA 90 bp AGGGATACTGGAGGGGAAGTGTCAGTTGCTCAGTTCTGCCCTCCAGAAGGTTTCTCACTGGAAGATGAGTaGCATCTGCCCCAGCCCTCA +
Preference number: 4 (lower is better)
Translates to: RDTGGEVSVAQFCPPEGFSLEDE*HLPQPS
Trigger: TGAGGGCTGGGGCAGATGCCACTCATCTTCCAGTGA...GAAACCTTCTGGAGGGCAGAACTGAGCAACTGACACTTCCCCTCCAGTATCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR TCA 90 bp TCCCTTATGGACAGTGATCGGGCCATGCCAGTTCACCTTCATTTTGACAGGAGTCTGCTCTGTGGAATGTaGCTTGGACCCGTGCCATCC +
Preference number: 4 (lower is better)
Translates to: SLMDSDRAMPVHLHFDRSLLCGM*LGPVPS
Trigger: GGATGGCACGGGTCCAAGTCACATTCCACAGAGCAG...ACTCCTGTCAAAATGAAGGTGAACTGGCATGGCCCGATCACTGTCCATAAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR TCA 90 bp ACCATGAGAGACGGGTGGAAAACTCCTTGGTGGGCCTTGGCTCTTAGTTGTCCCACTCAACGAAGCAAATaGCTCTCTCCTCTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: TMRDGWKTPWWALALSCPTQRSK*LSPLVW
Trigger: CCACACCAGAGGAGAGAGTCATTTGCTTCGTTGAGT...GGGACAACTAAGAGCCAAGGCCCACCAAGGAGTTTTCCACCCGTCTCTCATGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR TCA 90 bp TCCCTTATGGACAGTGATCGGGCCATGCCAGTTCACCTTCATTTTGACAGGAGTGCAATTCTTCATCAGTaGGGGCTCCAGCCCACCCAG +
Preference number: 4 (lower is better)
Translates to: SLMDSDRAMPVHLHFDRSAILHQ*GLQPTQ
Trigger: CTGGGTGGGCTGGAGCCCTCACTGATGAAGAATTGC...ACTCCTGTCAAAATGAAGGTGAACTGGCATGGCCCGATCACTGTCCATAAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR GCA 90 bp AGGAATGAGCCACTTTCTCCCTTATGGACAGTGATCGGGCCATGCCAGTTCACCGCCTGGTGCACACTCTaGTGTAACAAGTTGAGGCAC +
Preference number: 4 (lower is better)
Translates to: RNEPLSPLWTVIGPCQFTAWCTL*CNKLRH
Trigger: GTGCCTCAACTTGTTACAGCAGAGTGTGCACCAGGC...GGTGAACTGGCATGGCCCGATCACTGTCCATAAGGGAGAAAGTGGCTCATTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR GCA 90 bp AGGGATACTGGAGGGGAAGTGTCAGTTGCTCAGTTCTGCCCTCCAGAAGGTTTCGCCTGGTGCACACTCTaGTGTAACAAGTTGAGGCAC +
Preference number: 4 (lower is better)
Translates to: RDTGGEVSVAQFCPPEGFAWCTL*CNKLRH
Trigger: GTGCCTCAACTTGTTACAGCAGAGTGTGCACCAGGC...GAAACCTTCTGGAGGGCAGAACTGAGCAACTGACACTTCCCCTCCAGTATCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR GCA 90 bp AGGAATGAGCCACTTTCTCCCTTATGGACAGTGATCGGGCCATGCCAGTTCACCGACTCCATGGGTCCCTaGTTCTCAAGAGGTCTGATC +
Preference number: 4 (lower is better)
Translates to: RNEPLSPLWTVIGPCQFTDSMGP*FSRGLI
Trigger: GATCAGACCTCTTGAGAAGCAGGGACCCATGGAGTC...GGTGAACTGGCATGGCCCGATCACTGTCCATAAGGGAGAAAGTGGCTCATTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR GCA 90 bp GGCAAAGCTCTGAAAGGCAATTCTTCATCAGTGAGGGCTCCAGCCCACCCAGGTTCCACCCCATCAGTGTaGTTTCCAGAGGGGATTGAA +
Preference number: 4 (lower is better)
Translates to: GKALKGNSSSVRAPAHPGSTPSV*FPEGIE
Trigger: TTCAATCCCCTCTGGAAAGCACACTGATGGGGTGGA...ACCTGGGTGGGCTGGAGCCCTCACTGATGAAGAATTGCCTTTCAGAGCTTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR GCA 90 bp AGCTGGAGTCAGAACCGAGCTGCCCTAGTCCATCCCTTCCCCTGCCTGGTATTTACAGTGATCGGGCCATaGCAGTTCACCTTCATTTTG +
Preference number: 4 (lower is better)
Translates to: SWSQNRAALVHPFPCLVFTVIGP*QFTFIL
Trigger: CAAAATGAAGGTGAACTGGCATGGCCCGATCACTGT...AAATACCAGGCAGGGGAAGGGATGGACTAGGGCAGCTCGGTTCTGACTCCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR GCA 90 bp AGGGATACTGGAGGGGAAGTGTCAGTTGCTCAGTTCTGCCCTCCAGAAGGTTTCTCTTTAACAGCTTCCTaGCAACCCCCATCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: RDTGGEVSVAQFCPPEGFSLTAS*QPPSSR
Trigger: CCTGCTGGATGGGGGTTGGCAGGAAGCTGTTAAAGA...GAAACCTTCTGGAGGGCAGAACTGAGCAACTGACACTTCCCCTCCAGTATCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR GCA 90 bp TTTAATATTCCTACAAAAACAGGGCTATACTGGAAAGCTCTGCACCTCCACCCCACACGCAGGCCAGGCTaGTGGCCTCAGTACCCCTCC +
Preference number: 4 (lower is better)
Translates to: FNIPTKTGLYWKALHLHPTRRPG*WPQYPS
Trigger: GGAGGGGTACTGAGGCCAGCAGCCTGGCCTGCGTGT...GGGGTGGAGGTGCAGAGCTTTCCAGTATAGCCCTGTTTTTGTAGGAATATTAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR CCA 90 bp TCTTTCTTGGGCGCGGACAGACAAAACACTGAGGTGGGGAGGGAGGTGAGAATCCGCTCAGGGACACTATaGCTCCAGATAAAGACAGGA +
Preference number: 4 (lower is better)
Translates to: SFLGADRQNTEVGREVRIRSGTL*LQIKTG
Trigger: TCCTGTCTTTATCTGGAGCCATAGTGTCCCTGAGCG...GATTCTCACCTCCCTCCCCACCTCAGTGTTTTGTCTGTCCGCGCCCAAGAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396556.7
CDS-3UTR CCA 90 bp ACCATGAGAGACGGGTGGAAAACTCCTTGGTGGGCCTTGGCTCTTAGTTGTCCCTTGCCCAGGTTATGTTaGCACTGGCTGATGGCAAAG +
Preference number: 4 (lower is better)
Translates to: TMRDGWKTPWWALALSCPLPRLC*HWLMAK
Trigger: CTTTGCCATCAGCCAGTGCCAACATAACCTGGGCAA...GGGACAACTAAGAGCCAAGGCCCACCAAGGAGTTTTCCACCCGTCTCTCATGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR CCA 90 bp TCTTTCTTGGGCGCGGACAGACAAAACACTGAGGTGGGGAGGGAGGTGAGAATCAGTAGAAGCAGGAGATaGGTGGGTGATGGGACACTT +
Preference number: 4 (lower is better)
Translates to: SFLGADRQNTEVGREVRISRSRR*VGDGTL
Trigger: AAGTGTCCCATCACCCACCCATCTCCTGCTTCTACT...GATTCTCACCTCCCTCCCCACCTCAGTGTTTTGTCTGTCCGCGCCCAAGAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR CCA 90 bp AGGAATGAGCCACTTTCTCCCTTATGGACAGTGATCGGGCCATGCCAGTTCACCCCACTTTCTCCCTTATaGACAGTGATCGGGCCATGC +
Preference number: 4 (lower is better)
Translates to: RNEPLSPLWTVIGPCQFTPLSPL*TVIGPC
Trigger: GCATGGCCCGATCACTGTCCATAAGGGAGAAAGTGG...GGTGAACTGGCATGGCCCGATCACTGTCCATAAGGGAGAAAGTGGCTCATTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
3UTR CAA 72 bp TCCAGGCAGCTTTCCTGTCTGAACCAGAATCCAACCTaGAAATCTCCTTCAGTCCACAGCCTGACTCTGGGG +
Preference number: 4 (lower is better)
Translates to: SRQLSCLNQNPT*KSPSVHSLTLG
Trigger: CCCCAGAGTCAGGCTGTGGACTGAAGGAGATTTCAAGGTTGGATTCTGGTTCAGACAGGAAAGCTGCCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR TCA 90 bp TCCCTTATGGACAGTGATCGGGCCATGCCAGTTCACCTTCATTTTGACAGGAGTCTCTGGCTCTGGCTGTaGGGTTTGTTCGTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: SLMDSDRAMPVHLHFDRSLWLWL*GLFVFS
Trigger: GCTGAAGACGAACAAACCTCACAGCCAGAGCCAGAG...ACTCCTGTCAAAATGAAGGTGAACTGGCATGGCCCGATCACTGTCCATAAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR TCA 90 bp ACCATGAGAGACGGGTGGAAAACTCCTTGGTGGGCCTTGGCTCTTAGTTGTCCCCTTTTGGTCCATACATaGGTGTTGACGCACAGTCTC +
Preference number: 4 (lower is better)
Translates to: TMRDGWKTPWWALALSCPLLVHT*VLTHSL
Trigger: GAGACTGTGCGTCAACACTCATGTATGGACCAAAAG...GGGACAACTAAGAGCCAAGGCCCACCAAGGAGTTTTCCACCCGTCTCTCATGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR TCA 90 bp TCCCTTATGGACAGTGATCGGGCCATGCCAGTTCACCTTCATTTTGACAGGAGTCCTGTCTCAGCCTCCTaGGTAGCTGGAACTATAGGC +
Preference number: 4 (lower is better)
Translates to: SLMDSDRAMPVHLHFDRSPVSAS*VAGTIG
Trigger: GCCTATAGTTCCAGCTACTCAGGAGGCTGAGACAGG...ACTCCTGTCAAAATGAAGGTGAACTGGCATGGCCCGATCACTGTCCATAAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR TCA 90 bp AAGGCAAGGGTGTGCATACCAGTGACTTCCAGCCCACAGGGGAACACCCAACAAGCAATCATAGCATGCTaGAATCTCAAACTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: KARVCIPVTSSPQGNTQQAIIAC*NLKLLG
Trigger: GCCCAGGAGTTTGAGATTTCAGCATGCTATGATTGC...TTGTTGGGTGTTCCCCTGTGGGCTGGAAGTCACTGGTATGCACACCCTTGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR GCA 90 bp TCTTTCTTGGGCGCGGACAGACAAAACACTGAGGTGGGGAGGGAGGTGAGAATCGTTGTGCTTCACTTCTaGGGTAACCCTGTGGACTTT +
Preference number: 4 (lower is better)
Translates to: SFLGADRQNTEVGREVRIVVLHF*GNPVDF
Trigger: AAAGTCCACAGGGTTACCGCAGAAGTGAAGCACAAC...GATTCTCACCTCCCTCCCCACCTCAGTGTTTTGTCTGTCCGCGCCCAAGAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR GCA 90 bp AAATCTTTAACAGCTTCCTGCCAACCCCCATCCAGCAGGAAATACTTGCTTATCCGTTCCTCCACCCGTTaGTTCTCCTCCAGGTGCCGC +
Preference number: 4 (lower is better)
Translates to: KSLTASCQPPSSRKYLLIRSSTR*FSSRCR
Trigger: GCGGCACCTGGAGGAGAAGCAACGGGTGGAGGAACG...GATAAGCAAGTATTTCCTGCTGGATGGGGGTTGGCAGGAAGCTGTTAAAGATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR GCA 90 bp ATTTCTCTCTCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGTGAATGCGGCGGCTGCTGCTGCTaGTACAGCTCCGGACGCCCG +
Preference number: 4 (lower is better)
Translates to: ISLSLIISWMLIQGLSECGGCCC*YSSGRP
Trigger: CGGGCGTCCGGAGCTGTAGCAGCAGCAGCAGCCGCC...GCATTCACTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGAGAGAGAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438237.6
CDS-3UTR CCA 90 bp AAATCTTTAACAGCTTCCTGCCAACCCCCATCCAGCAGGAAATACTTGCTTATCGTTTTCCGAGGCTCCTaGCTTCTGGCTGGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: KSLTASCQPPSSRKYLLIVFRGS*LLAGLA
Trigger: GGCCAGCCCAGCCAGAAGCCAGGAGCCTCGGAAAAC...GATAAGCAAGTATTTCCTGCTGGATGGGGGTTGGCAGGAAGCTGTTAAAGATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR CCA 90 bp TCTTTCTTGGGCGCGGACAGACAAAACACTGAGGTGGGGAGGGAGGTGAGAATCAGGTTATGTTGGCACTaGCTGATGGCAAAGAGCCAA +
Preference number: 4 (lower is better)
Translates to: SFLGADRQNTEVGREVRIRLCWH*LMAKSQ
Trigger: TTGGCTCTTTGCCATCAGCCAGTGCCAACATAACCT...GATTCTCACCTCCCTCCCCACCTCAGTGTTTTGTCTGTCCGCGCCCAAGAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR CCA 90 bp TCTGAACCAGAATCCAACCTTGAAATCTCCTTCAGTCCACAGCCTGACTCTGGGGAAGCAGGAGATGGGTaGGTGATGGGACACTTGCTC +
Preference number: 4 (lower is better)
Translates to: SEPESNLEISFSPQPDSGEAGDG*VMGHLL
Trigger: GAGCAAGTGTCCCATCACCCACCCATCTCCTGCTTC...CCCAGAGTCAGGCTGTGGACTGAAGGAGATTTCAAGGTTGGATTCTGGTTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR CCA 90 bp AAGGCAAGGGTGTGCATACCAGTGACTTCCAGCCCACAGGGGAACACCCAACAATGGCATTGCAAAATGTaGCAGCCAGCTCTTGTGAGA +
Preference number: 4 (lower is better)
Translates to: KARVCIPVTSSPQGNTQQWHCKM*QPALVR
Trigger: TCTCACAAGAGCTGGCTGCCACATTTTGCAATGCCA...TTGTTGGGTGTTCCCCTGTGGGCTGGAAGTCACTGGTATGCACACCCTTGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR TCA 90 bp TCCCTTATGGACAGTGATCGGGCCATGCCAGTTCACCTTCATTTTGACAGGAGTAACCAATTCAGAGCCTaGGTTTGGCTCTGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: SLMDSDRAMPVHLHFDRSNQFRA*VWLWLW
Trigger: CCAGAGCCAGAGCCAAACTCAGGCTCTGAATTGGTT...ACTCCTGTCAAAATGAAGGTGAACTGGCATGGCCCGATCACTGTCCATAAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR TCA 90 bp AGGAATGAGCCACTTTCTCCCTTATGGACAGTGATCGGGCCATGCCAGTTCACCCTTTTGGTCCATACATaGGTGTTGACGCACAGTCTC +
Preference number: 4 (lower is better)
Translates to: RNEPLSPLWTVIGPCQFTLLVHT*VLTHSL
Trigger: GAGACTGTGCGTCAACACTCATGTATGGACCAAAAG...GGTGAACTGGCATGGCCCGATCACTGTCCATAAGGGAGAAAGTGGCTCATTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR TCA 90 bp TTCCCCAAACTAAATACAAGATTGAGGCTGTGGTTGTGCATGTTTTCATGTGCACCACCCACGGGATGGTaGGAATGGACCGGGCGTAGG +
Preference number: 4 (lower is better)
Translates to: FPKLNTRLRLWLCMFSCAPPTGW*EWTGRR
Trigger: CCTACGCCCGGTCCATTCTCACCATCCCGTGGGTGG...TGCACATGAAAACATGCACAACCACAGCCTCAATCTTGTATTTAGTTTGGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR TCA 90 bp TCTTTCTTGGGCGCGGACAGACAAAACACTGAGGTGGGGAGGGAGGTGAGAATCTTAACCAGGAAAAGTTaGGCTCACTTAGAGCCACCA +
Preference number: 4 (lower is better)
Translates to: SFLGADRQNTEVGREVRILTRKS*AHLEPP
Trigger: TGGTGGCTCTAAGTGAGCTCAACTTTTCCTGGTTAA...GATTCTCACCTCCCTCCCCACCTCAGTGTTTTGTCTGTCCGCGCCCAAGAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR GCA 90 bp ACTGAAACCATGGAATATTTATGCAGGCGTTATGTATGTTTTAGTCACAGTGCTCCCCGCCGCCGTCTGTaGCCTGGACTGCCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: TETMEYLCRRYVCFSHSAPRRRL*PGLPSP
Trigger: TGGAGAGGGCAGTCCAGGGCACAGACGGCGGCGGGG...AGCACTGTGACTAAAACATACATAACGCCTGCATAAATATTCCATGGTTTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396556.7
CDS-3UTR GCA 90 bp TTTAATATTCCTACAAAAACAGGGCTATACTGGAAAGCTCTGCACCTCCACCCCGGCTGGCCCGCCTGGTaGACACTCTGCTGTAACAAG +
Preference number: 4 (lower is better)
Translates to: FNIPTKTGLYWKALHLHPGWPAW*TLCCNK
Trigger: CTTGTTACAGCAGAGTGTGCACCAGGCGGGCCAGCC...GGGGTGGAGGTGCAGAGCTTTCCAGTATAGCCCTGTTTTTGTAGGAATATTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR GCA 90 bp AAATCTTTAACAGCTTCCTGCCAACCCCCATCCAGCAGGAAATACTTGCTTATCTGGCTAAAGCGCCCTTaGGGCCCTCGTGAAAGGCTG +
Preference number: 4 (lower is better)
Translates to: KSLTASCQPPSSRKYLLIWLKRP*GPRERL
Trigger: CAGCCTTTCACGAGGGCCGCAAGGGCGCTTTAGCCA...GATAAGCAAGTATTTCCTGCTGGATGGGGGTTGGCAGGAAGCTGTTAAAGATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR GCA 90 bp ACGTATACGGTGTGTACACACACGTGCCCCGAATGGCTCTTGAATAAATTCATTTGCTTCTCCTCCAGGTaGCGCTTCTGCTCGGTGGCT +
Preference number: 4 (lower is better)
Translates to: TYTVCTHTCPEWLLNKFICFSSR*RFCSVA
Trigger: AGCCACCGAGCAGAAGCGGCACCTGGAGGAGAAGCA...AATGAATTTATTCAAGAGCCATTCGGGGCACGTGTGTGTACACACCGTATACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR GCA 90 bp ACGTATACGGTGTGTACACACACGTGCCCCGAATGGCTCTTGAATAAATTCATTTGGGCTTCCATGGTGTaGGGAGGTTCTCGCGCTTCC +
Preference number: 4 (lower is better)
Translates to: TYTVCTHTCPEWLLNKFIWASMV*GGSRAS
Trigger: GGAAGCGCGAGAACCTCCGCACACCATGGAAGCCCA...AATGAATTTATTCAAGAGCCATTCGGGGCACGTGTGTGTACACACCGTATACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR GCA 90 bp TCCCTTATGGACAGTGATCGGGCCATGCCAGTTCACCTTCATTTTGACAGGAGTTCTTTAACAGCTTCCTaGCAACCCCCATCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: SLMDSDRAMPVHLHFDRSSLTAS*QPPSSR
Trigger: CCTGCTGGATGGGGGTTGGCAGGAAGCTGTTAAAGA...ACTCCTGTCAAAATGAAGGTGAACTGGCATGGCCCGATCACTGTCCATAAGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR GCA 90 bp TCTGAACCAGAATCCAACCTTGAAATCTCCTTCAGTCCACAGCCTGACTCTGGGGAACAGTATCCAGTCTaGAGTCCCATCGCGATCCCT +
Preference number: 4 (lower is better)
Translates to: SEPESNLEISFSPQPDSGEQYPV*SPIAIP
Trigger: AGGGATCGCGATGGGACTGCAGACTGGATACTGTTC...CCCAGAGTCAGGCTGTGGACTGAAGGAGATTTCAAGGTTGGATTCTGGTTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR CCA 90 bp GTATATAATTTCTCTCTCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGCCTCTCCATGGTCCGTaGGCGCCCGGGACGCGGGTG +
Preference number: 4 (lower is better)
Translates to: VYNFSLSHHFLDANTRSQPLHGP*APGTRV
Trigger: CACCCGCGTCCCGGGCGCCCACGGACCATGGAGAGG...CTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGAGAGAGAAATTATATAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000438237.6
CDS-3UTR CCA 90 bp TCCCTTATGGACAGTGATCGGGCCATGCCAGTTCACCTTCATTTTGACAGGAGTACACTGAGGTGTCTCTaGCTACAGGGAGACGCAGAA +
Preference number: 4 (lower is better)
Translates to: SLMDSDRAMPVHLHFDRSTLRCL*LQGDAE
Trigger: TTCTGCGTCTCCCTGTAGCCAGAGACACCTCAGTGT...ACTCCTGTCAAAATGAAGGTGAACTGGCATGGCCCGATCACTGTCCATAAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396556.7
CDS-3UTR CCA 90 bp ATTTCTCTCTCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGTGAATGCGGCTTCTGGCTGGGCTaGCCCGCCTGGTGCACACTC +
Preference number: 4 (lower is better)
Translates to: ISLSLIISWMLIQGLSECGFWLG*PAWCTL
Trigger: GAGTGTGCACCAGGCGGGCCAGCCCAGCCAGAAGCC...GCATTCACTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGAGAGAGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR CCA 90 bp ATGCTAATACAAGGTCTCAGTGAATGCCAACAAAACCCTGATACTCTACTACTTCTCCTGGCTTCTGGCTaGGCTGGCCCGCCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: MLIQGLSECQQNPDTLLLLLASG*AGPPGA
Trigger: TGCACCAGGCGGGCCAGCCCAGCCAGAAGCCAGGAG...AAGTAGTAGAGTATCAGGGTTTTGTTGGCATTCACTGAGACCTTGTATTAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR CCA 90 bp TCTTTCTTGGGCGCGGACAGACAAAACACTGAGGTGGGGAGGGAGGTGAGAATCCTTGCTTATCTTTCTTaGGCGCGGACAGACAAAACA +
Preference number: 4 (lower is better)
Translates to: SFLGADRQNTEVGREVRILAYLS*ARTDKT
Trigger: TGTTTTGTCTGTCCGCGCCCAAGAAAGATAAGCAAG...GATTCTCACCTCCCTCCCCACCTCAGTGTTTTGTCTGTCCGCGCCCAAGAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR CCA 90 bp AGGAATGAGCCACTTTCTCCCTTATGGACAGTGATCGGGCCATGCCAGTTCACCAAAGGGGAGCTTGGTTaGCTTCCATCGAGACTGATT +
Preference number: 4 (lower is better)
Translates to: RNEPLSPLWTVIGPCQFTKGELG*LPSRLI
Trigger: AATCAGTCTCGATGGAAGCCAACCAAGCTCCCCTTT...GGTGAACTGGCATGGCCCGATCACTGTCCATAAGGGAGAAAGTGGCTCATTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR CCA 90 bp AAGGCAAGGGTGTGCATACCAGTGACTTCCAGCCCACAGGGGAACACCCAACAAAATAAAAGGGGAGCTTaGTTGGCTTCCATCGAGACT +
Preference number: 4 (lower is better)
Translates to: KARVCIPVTSSPQGNTQQNKRGA*LASIET
Trigger: AGTCTCGATGGAAGCCAACCAAGCTCCCCTTTTATT...TTGTTGGGTGTTCCCCTGTGGGCTGGAAGTCACTGGTATGCACACCCTTGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR CCA 90 bp ACCATGAGAGACGGGTGGAAAACTCCTTGGTGGGCCTTGGCTCTTAGTTGTCCCGGAGGCATTATTACATaGAGACCTCTCAACAGGGAA +
Preference number: 4 (lower is better)
Translates to: TMRDGWKTPWWALALSCPGGIIT*RPLNRE
Trigger: TTCCCTGTTGAGAGGTCTCCATGTAATAATGCCTCC...GGGACAACTAAGAGCCAAGGCCCACCAAGGAGTTTTCCACCCGTCTCTCATGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429492.6
3UTR CAA 72 bp ACAGCTTCCTGCCAACCCCCATCCAGCAGGAAATACTaGCTTATCTTTCTTGGGCGCGGACAGACAAAACAC +
Preference number: 4 (lower is better)
Translates to: TASCQPPSSRKY*LIFLGRGQTKH
Trigger: GTGTTTTGTCTGTCCGCGCCCAAGAAAGATAAGCAAGTATTTCCTGCTGGATGGGGGTTGGCAGGAAGCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR TCA 90 bp CATAAATCTTTAACAGCTTCCTGCCAACCCCCATCCAGCAGGAAATACTTGCTTCATGTGGGAGCAAAGTaGGACTTCGGCTTCGGGAGC +
Preference number: 4 (lower is better)
Translates to: HKSLTASCQPPSSRKYLLHVGAK*DFGFGS
Trigger: GCTCCCGAAGCCGAAGTCTCACTTTGCTCCCACATG...AAGCAAGTATTTCCTGCTGGATGGGGGTTGGCAGGAAGCTGTTAAAGATTTATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396556.7
CDS-3UTR TCA 90 bp AAATCTTTAACAGCTTCCTGCCAACCCCCATCCAGCAGGAAATACTTGCTTATCCTGCTCTGTGGAATGTaGCTTGGACCCGTGCCATCC +
Preference number: 4 (lower is better)
Translates to: KSLTASCQPPSSRKYLLILLCGM*LGPVPS
Trigger: GGATGGCACGGGTCCAAGTCACATTCCACAGAGCAG...GATAAGCAAGTATTTCCTGCTGGATGGGGGTTGGCAGGAAGCTGTTAAAGATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR TCA 90 bp TCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGTGAATGCCAACAAAACGTGTGGCCCCAGCGGTaGTGGCCAGCAGTAGGTCTG +
Preference number: 4 (lower is better)
Translates to: SLIISWMLIQGLSECQQNVWPQR*WPAVGL
Trigger: CAGACCTACTGCTGGCCATCACCGCTGGGGCCACAC...GTTTTGTTGGCATTCACTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR TCA 90 bp ATGCTAATACAAGGTCTCAGTGAATGCCAACAAAACCCTGATACTCTACTACTTGTGTGGCCCCAGCGGTaGTGGCCAGCAGTAGGTCTG +
Preference number: 4 (lower is better)
Translates to: MLIQGLSECQQNPDTLLLVWPQR*WPAVGL
Trigger: CAGACCTACTGCTGGCCATCACCGCTGGGGCCACAC...AAGTAGTAGAGTATCAGGGTTTTGTTGGCATTCACTGAGACCTTGTATTAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR TCA 90 bp TCCCTTATGGACAGTGATCGGGCCATGCCAGTTCACCTTCATTTTGACAGGAGTACTTCCCAGGAGCAGTaGAATGTCTCGCCTATGATG +
Preference number: 4 (lower is better)
Translates to: SLMDSDRAMPVHLHFDRSTSQEQ*NVSPMM
Trigger: CATCATAGGCGAGACATTTCACTGCTCCTGGGAAGT...ACTCCTGTCAAAATGAAGGTGAACTGGCATGGCCCGATCACTGTCCATAAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR TCA 90 bp TCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGTGAATGCCAACAAAACCCACCCACGGGATGGTaGGAATGGACCGGGCGTAGG +
Preference number: 4 (lower is better)
Translates to: SLIISWMLIQGLSECQQNPPTGW*EWTGRR
Trigger: CCTACGCCCGGTCCATTCTCACCATCCCGTGGGTGG...GTTTTGTTGGCATTCACTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR GCA 90 bp GTATATAATTTCTCTCTCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGCCCCGGCACGGCGGCTaGTGCTGCTGCTACAGCTCC +
Preference number: 4 (lower is better)
Translates to: VYNFSLSHHFLDANTRSQPRHGG*CCCYSS
Trigger: GGAGCTGTAGCAGCAGCAGCAGCCGCCGTGCCGGGG...CTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGAGAGAGAAATTATATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000438237.6
CDS-3UTR GCA 90 bp ATACTCTACTACTTTAATATTCCTACAAAAACAGGGCTATACTGGAAAGCTCTGCCCCGCCGCCGTCTGTaGCCTGGACTGCCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: ILYYFNIPTKTGLYWKALPRRRL*PGLPSP
Trigger: TGGAGAGGGCAGTCCAGGGCACAGACGGCGGCGGGG...CAGAGCTTTCCAGTATAGCCCTGTTTTTGTAGGAATATTAAAGTAGTAGAGTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000438237.6
CDS-3UTR GCA 90 bp TCCCTTATGGACAGTGATCGGGCCATGCCAGTTCACCTTCATTTTGACAGGAGTGTGTTGGTTGGGTTGTaGTTCACTTCTGCGGTAACC +
Preference number: 4 (lower is better)
Translates to: SLMDSDRAMPVHLHFDRSVLVGL*FTSAVT
Trigger: GGTTACCGCAGAAGTGAAGCACAACCCAACCAACAC...ACTCCTGTCAAAATGAAGGTGAACTGGCATGGCCCGATCACTGTCCATAAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR GCA 90 bp AGGGATACTGGAGGGGAAGTGTCAGTTGCTCAGTTCTGCCCTCCAGAAGGTTTCGTCACAGTGCTTTCTTaGAGAGTTTGGGTTAACCAG +
Preference number: 4 (lower is better)
Translates to: RDTGGEVSVAQFCPPEGFVTVLS*RVWVNQ
Trigger: CTGGTTAACCCAAACTCTGCAAGAAAGCACTGTGAC...GAAACCTTCTGGAGGGCAGAACTGAGCAACTGACACTTCCCCTCCAGTATCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR GCA 90 bp AGCTGGAGTCAGAACCGAGCTGCCCTAGTCCATCCCTTCCCCTGCCTGGTATTTGTAAACAGGTTTCTTTaGTTAAGCAGTGGCTACAAG +
Preference number: 4 (lower is better)
Translates to: SWSQNRAALVHPFPCLVFVNRFL*LSSGYK
Trigger: CTTGTAGCCACTGCTTAAGCAAAGAAACCTGTTTAC...AAATACCAGGCAGGGGAAGGGATGGACTAGGGCAGCTCGGTTCTGACTCCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR GCA 90 bp GGCAAAGCTCTGAAAGGCAATTCTTCATCAGTGAGGGCTCCAGCCCACCCAGGTAGTATATTTTTAAAATaGCAGGCTGGGCACAGTGGC +
Preference number: 4 (lower is better)
Translates to: GKALKGNSSSVRAPAHPGSIFLK*QAGHSG
Trigger: GCCACTGTGCCCAGCCTGGCATTTTAAAAATATACT...ACCTGGGTGGGCTGGAGCCCTCACTGATGAAGAATTGCCTTTCAGAGCTTTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR CCA 90 bp CTGGTCTTAAGAAAGCAGACAAAAGGCACAAAATTAGTATTACTACAGAGAAGCGGCTTCTGGCTGGGCTaGCCCGCCTGGTGCACACTC +
Preference number: 4 (lower is better)
Translates to: LVLRKQTKGTKLVLLQRSGFWLG*PAWCTL
Trigger: GAGTGTGCACCAGGCGGGCCAGCCCAGCCAGAAGCC...GCTTCTCTGTAGTAATACTAATTTTGTGCCTTTTGTCTGCTTTCTTAAGACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR CCA 90 bp TTTAATATTCCTACAAAAACAGGGCTATACTGGAAAGCTCTGCACCTCCACCCCGGTTGTAGGGCTTCTTaGCTAAAGCGCCCTTGCGGC +
Preference number: 4 (lower is better)
Translates to: FNIPTKTGLYWKALHLHPGCRAS*LKRPCG
Trigger: GCCGCAAGGGCGCTTTAGCCAAGAAGCCCTACAACC...GGGGTGGAGGTGCAGAGCTTTCCAGTATAGCCCTGTTTTTGTAGGAATATTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR CCA 90 bp AGCTGGAGTCAGAACCGAGCTGCCCTAGTCCATCCCTTCCCCTGCCTGGTATTTACAAGATTGAGGCTGTaGTTGTGCATGTTTTCATGT +
Preference number: 4 (lower is better)
Translates to: SWSQNRAALVHPFPCLVFTRLRL*LCMFSC
Trigger: ACATGAAAACATGCACAACCACAGCCTCAATCTTGT...AAATACCAGGCAGGGGAAGGGATGGACTAGGGCAGCTCGGTTCTGACTCCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR CCA 90 bp TCTTTCTTGGGCGCGGACAGACAAAACACTGAGGTGGGGAGGGAGGTGAGAATCACCAAGATCACTCAATaGGGAATGCAGAGTCTTTTC +
Preference number: 4 (lower is better)
Translates to: SFLGADRQNTEVGREVRITKITQ*GMQSLF
Trigger: GAAAAGACTCTGCATTCCCCATTGAGTGATCTTGGT...GATTCTCACCTCCCTCCCCACCTCAGTGTTTTGTCTGTCCGCGCCCAAGAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR TCA 90 bp ATGCTAATACAAGGTCTCAGTGAATGCCAACAAAACCCTGATACTCTACTACTTGGTTGGTGTATTTGCTaGGCACGCCCTCGAGCGCCG +
Preference number: 4 (lower is better)
Translates to: MLIQGLSECQQNPDTLLLGWCIC*ARPRAP
Trigger: CGGCGCTCGAGGGCGTGCTCAGCAAATACACCAACC...AAGTAGTAGAGTATCAGGGTTTTGTTGGCATTCACTGAGACCTTGTATTAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000438237.6
CDS-3UTR TCA 90 bp TTACCCACTTTAACCTTGGTGAGTGCAGTATTTAAATGTGTAATCATACTCAGACGGGGGCCCCCACACTaGGGTGTCTCTGGCTACAGG +
Preference number: 4 (lower is better)
Translates to: LPTLTLVSAVFKCVIILRRGPPH*GVSGYR
Trigger: CCTGTAGCCAGAGACACCTCAGTGTGGGGGCCCCCG...TCTGAGTATGATTACACATTTAAATACTGCACTCACCAAGGTTAAAGTGGGTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000396556.7
CDS-3UTR TCA 90 bp CATAAATCTTTAACAGCTTCCTGCCAACCCCCATCCAGCAGGAAATACTTGCTTTCTGCTGTAACAAGTTaGGGCACTCCCCAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: HKSLTASCQPPSSRKYLLSAVTS*GTPQGS
Trigger: GCTGCCTTGGGGAGTGCCTCAACTTGTTACAGCAGA...AAGCAAGTATTTCCTGCTGGATGGGGGTTGGCAGGAAGCTGTTAAAGATTTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR TCA 90 bp ACGTATACGGTGTGTACACACACGTGCCCCGAATGGCTCTTGAATAAATTCATTTCTGCTGTAACAAGTTaGGGCACTCCCCAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: TYTVCTHTCPEWLLNKFISAVTS*GTPQGS
Trigger: GCTGCCTTGGGGAGTGCCTCAACTTGTTACAGCAGA...AATGAATTTATTCAAGAGCCATTCGGGGCACGTGTGTGTACACACCGTATACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR TCA 90 bp TCTGAACCAGAATCCAACCTTGAAATCTCCTTCAGTCCACAGCCTGACTCTGGGCCTCGTGAAAGGCTGTaGGATAATACTCAACGAAGC +
Preference number: 4 (lower is better)
Translates to: SEPESNLEISFSPQPDSGPRERL*DNTQRS
Trigger: GCTTCGTTGAGTATTATCTCACAGCCTTTCACGAGG...CCCAGAGTCAGGCTGTGGACTGAAGGAGATTTCAAGGTTGGATTCTGGTTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR TCA 90 bp ATGCTAATACAAGGTCTCAGTGAATGCCAACAAAACCCTGATACTCTACTACTTGCCATTGGGTGTTCGTaGCAGCTGGCAGGAGAGCGG +
Preference number: 4 (lower is better)
Translates to: MLIQGLSECQQNPDTLLLAIGCS*QLAGER
Trigger: CCGCTCTCCTGCCAGCTGTCACGAACACCCAATGGC...AAGTAGTAGAGTATCAGGGTTTTGTTGGCATTCACTGAGACCTTGTATTAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR GCA 90 bp ATACTCTACTACTTTAATATTCCTACAAAAACAGGGCTATACTGGAAAGCTCTGCGGCACGGCGGCTGCTaGTGCTGCTACAGCTCCGGA +
Preference number: 4 (lower is better)
Translates to: ILYYFNIPTKTGLYWKALRHGGC*CCYSSG
Trigger: TCCGGAGCTGTAGCAGCAGCAGCAGCCGCCGTGCCG...CAGAGCTTTCCAGTATAGCCCTGTTTTTGTAGGAATATTAAAGTAGTAGAGTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000438237.6
CDS-3UTR GCA 90 bp TTACCCACTTTAACCTTGGTGAGTGCAGTATTTAAATGTGTAATCATACTCAGATGCTGCTGCGGCTGCTaGTGTTGCTACCCCCGCCGC +
Preference number: 4 (lower is better)
Translates to: LPTLTLVSAVFKCVIILRCCCGC*CCYPRR
Trigger: GCGGCGGGGGTAGCAACAGCAGCAGCCGCAGCAGCA...TCTGAGTATGATTACACATTTAAATACTGCACTCACCAAGGTTAAAGTGGGTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000438237.6
CDS-3UTR GCA 90 bp TCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGTGAATGCCAACAAAACCTTCTGCTCGGTGGCTaGGTCAATGTCCCCCAGCCG +
Preference number: 4 (lower is better)
Translates to: SLIISWMLIQGLSECQQNLLLGG*VNVPQP
Trigger: CGGCTGGGGGACATTGACGCAGCCACCGAGCAGAAG...GTTTTGTTGGCATTCACTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR GCA 90 bp ATTTCTCTCTCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGTGAATGCCTTCTGCTCGGTGGCTaGGTCAATGTCCCCCAGCCG +
Preference number: 4 (lower is better)
Translates to: ISLSLIISWMLIQGLSECLLLGG*VNVPQP
Trigger: CGGCTGGGGGACATTGACGCAGCCACCGAGCAGAAG...GCATTCACTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGAGAGAGAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR GCA 90 bp ATTTCTCTCTCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGTGAATGCCGTTCCTCCACCCGTTaGTTCTCCTCCAGGTGCCGC +
Preference number: 4 (lower is better)
Translates to: ISLSLIISWMLIQGLSECRSSTR*FSSRCR
Trigger: GCGGCACCTGGAGGAGAAGCAACGGGTGGAGGAACG...GCATTCACTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGAGAGAGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR GCA 90 bp TCCCTTATGGACAGTGATCGGGCCATGCCAGTTCACCTTCATTTTGACAGGAGTCCAGCAGGAAATACTTaGTTATCTTTCTTGGGCGCG +
Preference number: 4 (lower is better)
Translates to: SLMDSDRAMPVHLHFDRSPAGNT*LSFLGA
Trigger: CGCGCCCAAGAAAGATAAGCAAGTATTTCCTGCTGG...ACTCCTGTCAAAATGAAGGTGAACTGGCATGGCCCGATCACTGTCCATAAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR CCA 90 bp TTACCCACTTTAACCTTGGTGAGTGCAGTATTTAAATGTGTAATCATACTCAGACTCCTGGCTTCTGGCTaGGCTGGCCCGCCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: LPTLTLVSAVFKCVIILRLLASG*AGPPGA
Trigger: TGCACCAGGCGGGCCAGCCCAGCCAGAAGCCAGGAG...TCTGAGTATGATTACACATTTAAATACTGCACTCACCAAGGTTAAAGTGGGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR CCA 90 bp AAATCTTTAACAGCTTCCTGCCAACCCCCATCCAGCAGGAAATACTTGCTTATCCTGTGGAATGTGACTTaGACCCGTGCCATCCCAGGA +
Preference number: 4 (lower is better)
Translates to: KSLTASCQPPSSRKYLLILWNVT*TRAIPG
Trigger: TCCTGGGATGGCACGGGTCCAAGTCACATTCCACAG...GATAAGCAAGTATTTCCTGCTGGATGGGGGTTGGCAGGAAGCTGTTAAAGATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR CCA 90 bp CATAAATCTTTAACAGCTTCCTGCCAACCCCCATCCAGCAGGAAATACTTGCTTCTGTGGAATGTGACTTaGACCCGTGCCATCCCAGGA +
Preference number: 4 (lower is better)
Translates to: HKSLTASCQPPSSRKYLLLWNVT*TRAIPG
Trigger: TCCTGGGATGGCACGGGTCCAAGTCACATTCCACAG...AAGCAAGTATTTCCTGCTGGATGGGGGTTGGCAGGAAGCTGTTAAAGATTTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR CCA 90 bp CATAAATCTTTAACAGCTTCCTGCCAACCCCCATCCAGCAGGAAATACTTGCTTAATGACTCTCTCCTCTaGTGTGGCCCCAGCGGTGAT +
Preference number: 4 (lower is better)
Translates to: HKSLTASCQPPSSRKYLLNDSLL*CGPSGD
Trigger: ATCACCGCTGGGGCCACACCAGAGGAGAGAGTCATT...AAGCAAGTATTTCCTGCTGGATGGGGGTTGGCAGGAAGCTGTTAAAGATTTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR CCA 90 bp TTTAATATTCCTACAAAAACAGGGCTATACTGGAAAGCTCTGCACCTCCACCCCAATGACTCTCTCCTCTaGTGTGGCCCCAGCGGTGAT +
Preference number: 4 (lower is better)
Translates to: FNIPTKTGLYWKALHLHPNDSLL*CGPSGD
Trigger: ATCACCGCTGGGGCCACACCAGAGGAGAGAGTCATT...GGGGTGGAGGTGCAGAGCTTTCCAGTATAGCCCTGTTTTTGTAGGAATATTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR CCA 90 bp ACGTATACGGTGTGTACACACACGTGCCCCGAATGGCTCTTGAATAAATTCATTGGTTCCTGGACTCCATaGGTCCCTGCTTCTCAAGAG +
Preference number: 4 (lower is better)
Translates to: TYTVCTHTCPEWLLNKFIGSWTP*VPASQE
Trigger: CTCTTGAGAAGCAGGGACCCATGGAGTCCAGGAACC...AATGAATTTATTCAAGAGCCATTCGGGGCACGTGTGTGTACACACCGTATACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR CCA 90 bp TCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGTGAATGCCAACAAAACCCCGCCAGAGGTTCCTaGACTCCATGGGTCCCTGCT +
Preference number: 4 (lower is better)
Translates to: SLIISWMLIQGLSECQQNPARGS*TPWVPA
Trigger: AGCAGGGACCCATGGAGTCCAGGAACCTCTGGCGGG...GTTTTGTTGGCATTCACTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR CCA 90 bp ATGCTAATACAAGGTCTCAGTGAATGCCAACAAAACCCTGATACTCTACTACTTCCCGCCAGAGGTTCCTaGACTCCATGGGTCCCTGCT +
Preference number: 4 (lower is better)
Translates to: MLIQGLSECQQNPDTLLLPARGS*TPWVPA
Trigger: AGCAGGGACCCATGGAGTCCAGGAACCTCTGGCGGG...AAGTAGTAGAGTATCAGGGTTTTGTTGGCATTCACTGAGACCTTGTATTAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR CCA 90 bp TTTAATATTCCTACAAAAACAGGGCTATACTGGAAAGCTCTGCACCTCCACCCCCTCCTTGGTGGGCCTTaGCTCTTAGTTGTCCCAGAG +
Preference number: 4 (lower is better)
Translates to: FNIPTKTGLYWKALHLHPLLGGP*LLVVPE
Trigger: CTCTGGGACAACTAAGAGCCAAGGCCCACCAAGGAG...GGGGTGGAGGTGCAGAGCTTTCCAGTATAGCCCTGTTTTTGTAGGAATATTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR CCA 90 bp TCTTTCTTGGGCGCGGACAGACAAAACACTGAGGTGGGGAGGGAGGTGAGAATCCTGTTATGGGCATACTaGCTTTTCTTAAACTCAGGA +
Preference number: 4 (lower is better)
Translates to: SFLGADRQNTEVGREVRILLWAY*LFLNSG
Trigger: TCCTGAGTTTAAGAAAAGCCAGTATGCCCATAACAG...GATTCTCACCTCCCTCCCCACCTCAGTGTTTTGTCTGTCCGCGCCCAAGAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000429492.6
3UTR CAA 72 bp TATACGGTGTGTACACACACGTGCCCCGAATGGCTCTaGAATAAATTCATTCCTCTAGCAGAGTGTGGGGGT +
Preference number: 4 (lower is better)
Translates to: YTVCTHTCPEWL*NKFIPLAECGG
Trigger: ACCCCCACACTCTGCTAGAGGAATGAATTTATTCAAGAGCCATTCGGGGCACGTGTGTGTACACACCGTATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR TCA 90 bp ACGTATACGGTGTGTACACACACGTGCCCCGAATGGCTCTTGAATAAATTCATTGCTGCAGGCGACTTGTaGTGCGTGATTGTGACAACA +
Preference number: 4 (lower is better)
Translates to: TYTVCTHTCPEWLLNKFIAAGDL*CVIVTT
Trigger: TGTTGTCACAATCACGCATCACAAGTCGCCTGCAGC...AATGAATTTATTCAAGAGCCATTCGGGGCACGTGTGTGTACACACCGTATACGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396556.7
CDS-3UTR TCA 90 bp TTTAATATTCCTACAAAAACAGGGCTATACTGGAAAGCTCTGCACCTCCACCCCCTTTCCAGAGGGGATTaGAGTATACCCAGCCATCGC +
Preference number: 4 (lower is better)
Translates to: FNIPTKTGLYWKALHLHPLSRGD*SIPSHR
Trigger: GCGATGGCTGGGTATACTTCAATCCCCTCTGGAAAG...GGGGTGGAGGTGCAGAGCTTTCCAGTATAGCCCTGTTTTTGTAGGAATATTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR GCA 90 bp CTGGTCTTAAGAAAGCAGACAAAAGGCACAAAATTAGTATTACTACAGAGAAGCGGCTCTTCGGGCGGCTaGAGGCGACTTGTGATGCGT +
Preference number: 4 (lower is better)
Translates to: LVLRKQTKGTKLVLLQRSGSSGG*RRLVMR
Trigger: ACGCATCACAAGTCGCCTGCAGCCGCCCGAAGAGCC...GCTTCTCTGTAGTAATACTAATTTTGTGCCTTTTGTCTGCTTTCTTAAGACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396556.7
CDS-3UTR GCA 90 bp CATAAATCTTTAACAGCTTCCTGCCAACCCCCATCCAGCAGGAAATACTTGCTTTGCACAAGGTTCTTCTaGTGCCCTTCCACCTGGTTC +
Preference number: 4 (lower is better)
Translates to: HKSLTASCQPPSSRKYLLCTRFF*CPSTWF
Trigger: GAACCAGGTGGAAGGGCAGCAGAAGAACCTTGTGCA...AAGCAAGTATTTCCTGCTGGATGGGGGTTGGCAGGAAGCTGTTAAAGATTTATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR GCA 90 bp CATAAATCTTTAACAGCTTCCTGCCAACCCCCATCCAGCAGGAAATACTTGCTTAGGGACTCAATGGCGTaGACAAGGTTCTTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: HKSLTASCQPPSSRKYLLRDSMA*TRFFCC
Trigger: GCAGCAGAAGAACCTTGTGCACGCCATTGAGTCCCT...AAGCAAGTATTTCCTGCTGGATGGGGGTTGGCAGGAAGCTGTTAAAGATTTATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR GCA 90 bp TCTGAACCAGAATCCAACCTTGAAATCTCCTTCAGTCCACAGCCTGACTCTGGGGTGCGCCATGAAATCTaGATACATCTCCAGCAAAGA +
Preference number: 4 (lower is better)
Translates to: SEPESNLEISFSPQPDSGVRHEI*IHLQQR
Trigger: TCTTTGCTGGAGATGTATGCAGATTTCATGGCGCAC...CCCAGAGTCAGGCTGTGGACTGAAGGAGATTTCAAGGTTGGATTCTGGTTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR GCA 90 bp ATGCTAATACAAGGTCTCAGTGAATGCCAACAAAACCCTGATACTCTACTACTTTGGCTAAAGCGCCCTTaGGGCCCTCGTGAAAGGCTG +
Preference number: 4 (lower is better)
Translates to: MLIQGLSECQQNPDTLLLWLKRP*GPRERL
Trigger: CAGCCTTTCACGAGGGCCGCAAGGGCGCTTTAGCCA...AAGTAGTAGAGTATCAGGGTTTTGTTGGCATTCACTGAGACCTTGTATTAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR GCA 90 bp ACGTATACGGTGTGTACACACACGTGCCCCGAATGGCTCTTGAATAAATTCATTGACTCCATGGGTCCCTaGTTCTCAAGAGGTCTGATC +
Preference number: 4 (lower is better)
Translates to: TYTVCTHTCPEWLLNKFIDSMGP*FSRGLI
Trigger: GATCAGACCTCTTGAGAAGCAGGGACCCATGGAGTC...AATGAATTTATTCAAGAGCCATTCGGGGCACGTGTGTGTACACACCGTATACGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR GCA 90 bp CTGGTCTTAAGAAAGCAGACAAAAGGCACAAAATTAGTATTACTACAGAGAAGCCTTCTGCTCGGTGGCTaGGTCAATGTCCCCCAGCCG +
Preference number: 4 (lower is better)
Translates to: LVLRKQTKGTKLVLLQRSLLLGG*VNVPQP
Trigger: CGGCTGGGGGACATTGACGCAGCCACCGAGCAGAAG...GCTTCTCTGTAGTAATACTAATTTTGTGCCTTTTGTCTGCTTTCTTAAGACCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR GCA 90 bp ATTTCTCTCTCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGTGAATGCTCCAGGTGCCGCTTCTaGTCGGTGGCTGCGTCAATG +
Preference number: 4 (lower is better)
Translates to: ISLSLIISWMLIQGLSECSRCRF*SVAASM
Trigger: CATTGACGCAGCCACCGAGCAGAAGCGGCACCTGGA...GCATTCACTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGAGAGAGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR GCA 90 bp TCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGTGAATGCCAACAAAACTGGGCTTCCATGGTGTaGGGAGGTTCTCGCGCTTCC +
Preference number: 4 (lower is better)
Translates to: SLIISWMLIQGLSECQQNWASMV*GGSRAS
Trigger: GGAAGCGCGAGAACCTCCGCACACCATGGAAGCCCA...GTTTTGTTGGCATTCACTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR GCA 90 bp ATTTCTCTCTCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGTGAATGCTGGGCTTCCATGGTGTaGGGAGGTTCTCGCGCTTCC +
Preference number: 4 (lower is better)
Translates to: ISLSLIISWMLIQGLSECWASMV*GGSRAS
Trigger: GGAAGCGCGAGAACCTCCGCACACCATGGAAGCCCA...GCATTCACTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGAGAGAGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR GCA 90 bp TCCCTTATGGACAGTGATCGGGCCATGCCAGTTCACCTTCATTTTGACAGGAGTTTGAGGCTGTGGTTGTaGATGTTTTCATGTGCATGC +
Preference number: 4 (lower is better)
Translates to: SLMDSDRAMPVHLHFDRSLRLWL*MFSCAC
Trigger: GCATGCACATGAAAACATGCACAACCACAGCCTCAA...ACTCCTGTCAAAATGAAGGTGAACTGGCATGGCCCGATCACTGTCCATAAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR GCA 90 bp TTCCCCAAACTAAATACAAGATTGAGGCTGTGGTTGTGCATGTTTTCATGTGCAGGGTTCCTGTGGGCCTaGTTTAAGACGTGTGGCTCC +
Preference number: 4 (lower is better)
Translates to: FPKLNTRLRLWLCMFSCAGFLWA*FKTCGS
Trigger: GGAGCCACACGTCTTAAAGCAGGCCCACAGGAACCC...TGCACATGAAAACATGCACAACCACAGCCTCAATCTTGTATTTAGTTTGGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR GCA 90 bp AAGGCAAGGGTGTGCATACCAGTGACTTCCAGCCCACAGGGGAACACCCAACAATCACTCAATGGGGAATaGAGAGTCTTTTCAACAAAT +
Preference number: 4 (lower is better)
Translates to: KARVCIPVTSSPQGNTQQSLNGE*RVFSTN
Trigger: ATTTGTTGAAAAGACTCTGCATTCCCCATTGAGTGA...TTGTTGGGTGTTCCCCTGTGGGCTGGAAGTCACTGGTATGCACACCCTTGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR CCA 90 bp GTATATAATTTCTCTCTCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGCCGCCGTCTGTGCCCTaGACTGCCCTCTCCATGGTC +
Preference number: 4 (lower is better)
Translates to: VYNFSLSHHFLDANTRSQPPSVP*TALSMV
Trigger: GACCATGGAGAGGGCAGTCCAGGGCACAGACGGCGG...CTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGAGAGAGAAATTATATAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000438237.6
CDS-3UTR CCA 90 bp ACTGAAACCATGGAATATTTATGCAGGCGTTATGTATGTTTTAGTCACAGTGCTGTTTTCCGAGGCTCCTaGCTTCTGGCTGGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: TETMEYLCRRYVCFSHSAVFRGS*LLAGLA
Trigger: GGCCAGCCCAGCCAGAAGCCAGGAGCCTCGGAAAAC...AGCACTGTGACTAAAACATACATAACGCCTGCATAAATATTCCATGGTTTCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR CCA 90 bp ATGCTAATACAAGGTCTCAGTGAATGCCAACAAAACCCTGATACTCTACTACTTGGTGTTCGTGACAGCTaGCAGGAGAGCGGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: MLIQGLSECQQNPDTLLLGVRDS*QESGKQ
Trigger: CTGCTTCCCGCTCTCCTGCCAGCTGTCACGAACACC...AAGTAGTAGAGTATCAGGGTTTTGTTGGCATTCACTGAGACCTTGTATTAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR CCA 90 bp ATGCTAATACAAGGTCTCAGTGAATGCCAACAAAACCCTGATACTCTACTACTTCATAAGGGCTTCAGCTaGGCACACAGTGCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: MLIQGLSECQQNPDTLLLHKGFS*AHSALP
Trigger: GGGCAGGGCACTGTGTGCCCAGCTGAAGCCCTTATG...AAGTAGTAGAGTATCAGGGTTTTGTTGGCATTCACTGAGACCTTGTATTAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR CCA 90 bp AGGGATACTGGAGGGGAAGTGTCAGTTGCTCAGTTCTGCCCTCCAGAAGGTTTCAAAACCACATTGAGATaGCACTTCATAGCCATTAGG +
Preference number: 4 (lower is better)
Translates to: RDTGGEVSVAQFCPPEGFKTTLR*HFIAIR
Trigger: CCTAATGGCTATGAAGTGCCATCTCAATGTGGTTTT...GAAACCTTCTGGAGGGCAGAACTGAGCAACTGACACTTCCCCTCCAGTATCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR TCA 90 bp ACGTATACGGTGTGTACACACACGTGCCCCGAATGGCTCTTGAATAAATTCATTGCACAAGCTCGAAGCTaGGTCACCCAGAATTGTTTC +
Preference number: 4 (lower is better)
Translates to: TYTVCTHTCPEWLLNKFIAQARS*VTQNCF
Trigger: GAAACAATTCTGGGTGACTCAGCTTCGAGCTTGTGC...AATGAATTTATTCAAGAGCCATTCGGGGCACGTGTGTGTACACACCGTATACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000438237.6
CDS-3UTR TCA 90 bp TTCCCCAAACTAAATACAAGATTGAGGCTGTGGTTGTGCATGTTTTCATGTGCAGGTTCATCATCTCTCTaGCTTCGTGAAGCTGGCCGG +
Preference number: 4 (lower is better)
Translates to: FPKLNTRLRLWLCMFSCAGSSSL*LREAGR
Trigger: CCGGCCAGCTTCACGAAGTCAGAGAGATGATGAACC...TGCACATGAAAACATGCACAACCACAGCCTCAATCTTGTATTTAGTTTGGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR TCA 90 bp TTTAATATTCCTACAAAAACAGGGCTATACTGGAAAGCTCTGCACCTCCACCCCTATGTTGGCACTGGCTaGTGGCAAAGAGCCAAGTGT +
Preference number: 4 (lower is better)
Translates to: FNIPTKTGLYWKALHLHPYVGTG*WQRAKC
Trigger: ACACTTGGCTCTTTGCCATCAGCCAGTGCCAACATA...GGGGTGGAGGTGCAGAGCTTTCCAGTATAGCCCTGTTTTTGTAGGAATATTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR TCA 90 bp AAATCTTTAACAGCTTCCTGCCAACCCCCATCCAGCAGGAAATACTTGCTTATCGAAATGTCTCGCCTATaGTGGGGTTGTAGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: KSLTASCQPPSSRKYLLIEMSRL*WGCRAS
Trigger: AGAAGCCCTACAACCCCATCATAGGCGAGACATTTC...GATAAGCAAGTATTTCCTGCTGGATGGGGGTTGGCAGGAAGCTGTTAAAGATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR TCA 90 bp AGGAATGAGCCACTTTCTCCCTTATGGACAGTGATCGGGCCATGCCAGTTCACCCTTCAACACAGTATTTaGAGTTCTAGGTACAGCAAT +
Preference number: 4 (lower is better)
Translates to: RNEPLSPLWTVIGPCQFTLQHSI*SSRYSN
Trigger: ATTGCTGTACCTAGAACTTCAAATACTGTGTTGAAG...GGTGAACTGGCATGGCCCGATCACTGTCCATAAGGGAGAAAGTGGCTCATTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR GCA 90 bp ATACTCTACTACTTTAATATTCCTACAAAAACAGGGCTATACTGGAAAGCTCTGGTCTGTGCCCTGGACTaGCCTCTCCATGGTCCGTGG +
Preference number: 4 (lower is better)
Translates to: ILYYFNIPTKTGLYWKALVCALD*PLHGPW
Trigger: CCACGGACCATGGAGAGGGCAGTCCAGGGCACAGAC...CAGAGCTTTCCAGTATAGCCCTGTTTTTGTAGGAATATTAAAGTAGTAGAGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000438237.6
CDS-3UTR GCA 90 bp CATAAATCTTTAACAGCTTCCTGCCAACCCCCATCCAGCAGGAAATACTTGCTTACAAGGTTCTTCTGCTaGCCTTCCACCTGGTTCATC +
Preference number: 4 (lower is better)
Translates to: HKSLTASCQPPSSRKYLLTRFFC*PSTWFI
Trigger: GATGAACCAGGTGGAAGGGCAGCAGAAGAACCTTGT...AAGCAAGTATTTCCTGCTGGATGGGGGTTGGCAGGAAGCTGTTAAAGATTTATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR GCA 90 bp ACGTATACGGTGTGTACACACACGTGCCCCGAATGGCTCTTGAATAAATTCATTAGCAGTAGGTCTGGGTaGGCCATGAAATCTGCATAC +
Preference number: 4 (lower is better)
Translates to: TYTVCTHTCPEWLLNKFISSRSG*AMKSAY
Trigger: GTATGCAGATTTCATGGCGCACCCAGACCTACTGCT...AATGAATTTATTCAAGAGCCATTCGGGGCACGTGTGTGTACACACCGTATACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR GCA 90 bp TTTAATATTCCTACAAAAACAGGGCTATACTGGAAAGCTCTGCACCTCCACCCCTCCACCCCATCAGTGTaGTTTCCAGAGGGGATTGAA +
Preference number: 4 (lower is better)
Translates to: FNIPTKTGLYWKALHLHPSTPSV*FPEGIE
Trigger: TTCAATCCCCTCTGGAAAGCACACTGATGGGGTGGA...GGGGTGGAGGTGCAGAGCTTTCCAGTATAGCCCTGTTTTTGTAGGAATATTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR GCA 90 bp TTTAATATTCCTACAAAAACAGGGCTATACTGGAAAGCTCTGCACCTCCACCCCGTGTGTACACACACGTaGCCCGAATGGCTCTTGAAT +
Preference number: 4 (lower is better)
Translates to: FNIPTKTGLYWKALHLHPVCTHT*PEWLLN
Trigger: ATTCAAGAGCCATTCGGGGCACGTGTGTGTACACAC...GGGGTGGAGGTGCAGAGCTTTCCAGTATAGCCCTGTTTTTGTAGGAATATTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR GCA 90 bp ACGTATACGGTGTGTACACACACGTGCCCCGAATGGCTCTTGAATAAATTCATTGTGTGTACACACACGTaGCCCGAATGGCTCTTGAAT +
Preference number: 4 (lower is better)
Translates to: TYTVCTHTCPEWLLNKFIVCTHT*PEWLLN
Trigger: ATTCAAGAGCCATTCGGGGCACGTGTGTGTACACAC...AATGAATTTATTCAAGAGCCATTCGGGGCACGTGTGTGTACACACCGTATACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR GCA 90 bp TCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGTGAATGCCAACAAAACGAGTCAGAACCGAGCTaGCCTAGTCCATCCCTTCCC +
Preference number: 4 (lower is better)
Translates to: SLIISWMLIQGLSECQQNESEPS*PSPSLP
Trigger: GGGAAGGGATGGACTAGGGCAGCTCGGTTCTGACTC...GTTTTGTTGGCATTCACTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR GCA 90 bp TTCCCCAAACTAAATACAAGATTGAGGCTGTGGTTGTGCATGTTTTCATGTGCACAGCCCTCACCGGCCTaGTCTTCATTGATGTTGCTG +
Preference number: 4 (lower is better)
Translates to: FPKLNTRLRLWLCMFSCAQPSPA*SSLMLL
Trigger: CAGCAACATCAATGAAGAGCAGGCCGGTGAGGGCTG...TGCACATGAAAACATGCACAACCACAGCCTCAATCTTGTATTTAGTTTGGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR GCA 90 bp TCTTTCTTGGGCGCGGACAGACAAAACACTGAGGTGGGGAGGGAGGTGAGAATCCCTAATCTTGTAACTTaGTACAAAGCTACAGTAACT +
Preference number: 4 (lower is better)
Translates to: SFLGADRQNTEVGREVRIPNLVT*YKATVT
Trigger: AGTTACTGTAGCTTTGTAGCAAGTTACAAGATTAGG...GATTCTCACCTCCCTCCCCACCTCAGTGTTTTGTCTGTCCGCGCCCAAGAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR CCA 90 bp ACGTATACGGTGTGTACACACACGTGCCCCGAATGGCTCTTGAATAAATTCATTCGCTCAGGGACACTATaGCTCCAGATAAAGACAGGA +
Preference number: 4 (lower is better)
Translates to: TYTVCTHTCPEWLLNKFIRSGTL*LQIKTG
Trigger: TCCTGTCTTTATCTGGAGCCATAGTGTCCCTGAGCG...AATGAATTTATTCAAGAGCCATTCGGGGCACGTGTGTGTACACACCGTATACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000438237.6
CDS-3UTR CCA 90 bp TTCCCCAAACTAAATACAAGATTGAGGCTGTGGTTGTGCATGTTTTCATGTGCATACACCACCAGCATGTaGGGAGCTTCATCGCTCAGG +
Preference number: 4 (lower is better)
Translates to: FPKLNTRLRLWLCMFSCAYTTSM*GASSLR
Trigger: CCTGAGCGATGAAGCTCCCCACATGCTGGTGGTGTA...TGCACATGAAAACATGCACAACCACAGCCTCAATCTTGTATTTAGTTTGGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396556.7
CDS-3UTR CCA 90 bp TTACCCACTTTAACCTTGGTGAGTGCAGTATTTAAATGTGTAATCATACTCAGAGTTTTCCGAGGCTCCTaGCTTCTGGCTGGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: LPTLTLVSAVFKCVIILRVFRGS*LLAGLA
Trigger: GGCCAGCCCAGCCAGAAGCCAGGAGCCTCGGAAAAC...TCTGAGTATGATTACACATTTAAATACTGCACTCACCAAGGTTAAAGTGGGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR CCA 90 bp ATGCTAATACAAGGTCTCAGTGAATGCCAACAAAACCCTGATACTCTACTACTTGGTTGTAGGGCTTCTTaGCTAAAGCGCCCTTGCGGC +
Preference number: 4 (lower is better)
Translates to: MLIQGLSECQQNPDTLLLGCRAS*LKRPCG
Trigger: GCCGCAAGGGCGCTTTAGCCAAGAAGCCCTACAACC...AAGTAGTAGAGTATCAGGGTTTTGTTGGCATTCACTGAGACCTTGTATTAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR CCA 90 bp TCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGTGAATGCCAACAAAACAGGGTCATCGGCCATTaGGTGTTCGTGACAGCTGGC +
Preference number: 4 (lower is better)
Translates to: SLIISWMLIQGLSECQQNRVIGH*VFVTAG
Trigger: GCCAGCTGTCACGAACACCCAATGGCCGATGACCCT...GTTTTGTTGGCATTCACTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR CCA 90 bp ACGTATACGGTGTGTACACACACGTGCCCCGAATGGCTCTTGAATAAATTCATTAGTAGAAGCAGGAGATaGGTGGGTGATGGGACACTT +
Preference number: 4 (lower is better)
Translates to: TYTVCTHTCPEWLLNKFISRSRR*VGDGTL
Trigger: AAGTGTCCCATCACCCACCCATCTCCTGCTTCTACT...AATGAATTTATTCAAGAGCCATTCGGGGCACGTGTGTGTACACACCGTATACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR CCA 90 bp ATACTCTACTACTTTAATATTCCTACAAAAACAGGGCTATACTGGAAAGCTCTGGCCGCTTCTGCTCGGTaGCTGCGTCAATGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: ILYYFNIPTKTGLYWKALAASAR*LRQCPP
Trigger: TGGGGGACATTGACGCAGCCACCGAGCAGAAGCGGC...CAGAGCTTTCCAGTATAGCCCTGTTTTTGTAGGAATATTAAAGTAGTAGAGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR CCA 90 bp AGGAATGAGCCACTTTCTCCCTTATGGACAGTGATCGGGCCATGCCAGTTCACCTCTCTCATCATTTCTTaGATGCTAATACAAGGTCTC +
Preference number: 4 (lower is better)
Translates to: RNEPLSPLWTVIGPCQFTSLIIS*MLIQGL
Trigger: GAGACCTTGTATTAGCATCCAAGAAATGATGAGAGA...GGTGAACTGGCATGGCCCGATCACTGTCCATAAGGGAGAAAGTGGCTCATTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR CCA 90 bp TCCCTTATGGACAGTGATCGGGCCATGCCAGTTCACCTTCATTTTGACAGGAGTTGGTGTTGGGGAAACTaGATATCCACATGCAAAAGA +
Preference number: 4 (lower is better)
Translates to: SLMDSDRAMPVHLHFDRSWCWGN*ISTCKR
Trigger: TCTTTTGCATGTGGATATCCAGTTTCCCCAACACCA...ACTCCTGTCAAAATGAAGGTGAACTGGCATGGCCCGATCACTGTCCATAAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR TCA 90 bp TTCCCCAAACTAAATACAAGATTGAGGCTGTGGTTGTGCATGTTTTCATGTGCAAACCAATTCAGAGCCTaGGTTTGGCTCTGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: FPKLNTRLRLWLCMFSCANQFRA*VWLWLW
Trigger: CCAGAGCCAGAGCCAAACTCAGGCTCTGAATTGGTT...TGCACATGAAAACATGCACAACCACAGCCTCAATCTTGTATTTAGTTTGGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR TCA 90 bp TTTAATATTCCTACAAAAACAGGGCTATACTGGAAAGCTCTGCACCTCCACCCCCCTCGTGAAAGGCTGTaGGATAATACTCAACGAAGC +
Preference number: 4 (lower is better)
Translates to: FNIPTKTGLYWKALHLHPPRERL*DNTQRS
Trigger: GCTTCGTTGAGTATTATCTCACAGCCTTTCACGAGG...GGGGTGGAGGTGCAGAGCTTTCCAGTATAGCCCTGTTTTTGTAGGAATATTAAA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR TCA 90 bp ATTTCTCTCTCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGTGAATGCCTCCCTTATGGACAGTaGTCGGGCCATGCCAGTTCA +
Preference number: 4 (lower is better)
Translates to: ISLSLIISWMLIQGLSECLPYGQ*SGHASS
Trigger: TGAACTGGCATGGCCCGATCACTGTCCATAAGGGAG...GCATTCACTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGAGAGAGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR TCA 90 bp CTGGTCTTAAGAAAGCAGACAAAAGGCACAAAATTAGTATTACTACAGAGAAGCTGGGCAAGGGACCAATaGCAGGCGGCAGAGTTACCT +
Preference number: 4 (lower is better)
Translates to: LVLRKQTKGTKLVLLQRSWARDQ*QAAELP
Trigger: AGGTAACTCTGCCGCCTGTCATTGGTCCCTTGCCCA...GCTTCTCTGTAGTAATACTAATTTTGTGCCTTTTGTCTGCTTTCTTAAGACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR TCA 90 bp CATAAATCTTTAACAGCTTCCTGCCAACCCCCATCCAGCAGGAAATACTTGCTTCAGGAGGCAAAGCTCTaGAAGGCAATTCTTCATCAG +
Preference number: 4 (lower is better)
Translates to: HKSLTASCQPPSSRKYLLQEAKL*KAILHQ
Trigger: CTGATGAAGAATTGCCTTTCAGAGCTTTGCCTCCTG...AAGCAAGTATTTCCTGCTGGATGGGGGTTGGCAGGAAGCTGTTAAAGATTTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR GCA 90 bp TTACCCACTTTAACCTTGGTGAGTGCAGTATTTAAATGTGTAATCATACTCAGAGGCTGGCCCGCCTGGTaGACACTCTGCTGTAACAAG +
Preference number: 4 (lower is better)
Translates to: LPTLTLVSAVFKCVIILRGWPAW*TLCCNK
Trigger: CTTGTTACAGCAGAGTGTGCACCAGGCGGGCCAGCC...TCTGAGTATGATTACACATTTAAATACTGCACTCACCAAGGTTAAAGTGGGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR GCA 90 bp TTACCCACTTTAACCTTGGTGAGTGCAGTATTTAAATGTGTAATCATACTCAGATGGCTAAAGCGCCCTTaGGGCCCTCGTGAAAGGCTG +
Preference number: 4 (lower is better)
Translates to: LPTLTLVSAVFKCVIILRWLKRP*GPRERL
Trigger: CAGCCTTTCACGAGGGCCGCAAGGGCGCTTTAGCCA...TCTGAGTATGATTACACATTTAAATACTGCACTCACCAAGGTTAAAGTGGGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR GCA 90 bp GTATATAATTTCTCTCTCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGTCCAGGTGCCGCTTCTaGTCGGTGGCTGCGTCAATG +
Preference number: 4 (lower is better)
Translates to: VYNFSLSHHFLDANTRSQSRCRF*SVAASM
Trigger: CATTGACGCAGCCACCGAGCAGAAGCGGCACCTGGA...CTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGAGAGAGAAATTATATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR GCA 90 bp ATACTCTACTACTTTAATATTCCTACAAAAACAGGGCTATACTGGAAAGCTCTGTCCAGGTGCCGCTTCTaGTCGGTGGCTGCGTCAATG +
Preference number: 4 (lower is better)
Translates to: ILYYFNIPTKTGLYWKALSRCRF*SVAASM
Trigger: CATTGACGCAGCCACCGAGCAGAAGCGGCACCTGGA...CAGAGCTTTCCAGTATAGCCCTGTTTTTGTAGGAATATTAAAGTAGTAGAGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR GCA 90 bp ATACTCTACTACTTTAATATTCCTACAAAAACAGGGCTATACTGGAAAGCTCTGTGCTTCTCCTCCAGGTaGCGCTTCTGCTCGGTGGCT +
Preference number: 4 (lower is better)
Translates to: ILYYFNIPTKTGLYWKALCFSSR*RFCSVA
Trigger: AGCCACCGAGCAGAAGCGGCACCTGGAGGAGAAGCA...CAGAGCTTTCCAGTATAGCCCTGTTTTTGTAGGAATATTAAAGTAGTAGAGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR GCA 90 bp ACGTATACGGTGTGTACACACACGTGCCCCGAATGGCTCTTGAATAAATTCATTACAGTGATCGGGCCATaGCAGTTCACCTTCATTTTG +
Preference number: 4 (lower is better)
Translates to: TYTVCTHTCPEWLLNKFITVIGP*QFTFIL
Trigger: CAAAATGAAGGTGAACTGGCATGGCCCGATCACTGT...AATGAATTTATTCAAGAGCCATTCGGGGCACGTGTGTGTACACACCGTATACGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR GCA 90 bp CATAAATCTTTAACAGCTTCCTGCCAACCCCCATCCAGCAGGAAATACTTGCTTCCAGCAGGAAATACTTaGTTATCTTTCTTGGGCGCG +
Preference number: 4 (lower is better)
Translates to: HKSLTASCQPPSSRKYLLPAGNT*LSFLGA
Trigger: CGCGCCCAAGAAAGATAAGCAAGTATTTCCTGCTGG...AAGCAAGTATTTCCTGCTGGATGGGGGTTGGCAGGAAGCTGTTAAAGATTTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR GCA 90 bp AAATCTTTAACAGCTTCCTGCCAACCCCCATCCAGCAGGAAATACTTGCTTATCTCAGTTGCTCAGTTCTaGCCTCCAGAAGGTTTCATG +
Preference number: 4 (lower is better)
Translates to: KSLTASCQPPSSRKYLLISVAQF*PPEGFM
Trigger: CATGAAACCTTCTGGAGGGCAGAACTGAGCAACTGA...GATAAGCAAGTATTTCCTGCTGGATGGGGGTTGGCAGGAAGCTGTTAAAGATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR CCA 90 bp TTTAATATTCCTACAAAAACAGGGCTATACTGGAAAGCTCTGCACCTCCACCCCACTCCTCGAGGCTTCTaGTGTTTGCTTTGCTCATTC +
Preference number: 4 (lower is better)
Translates to: FNIPTKTGLYWKALHLHPTPRGF*CLLCSF
Trigger: GAATGAGCAAAGCAAACACCAGAAGCCTCGAGGAGT...GGGGTGGAGGTGCAGAGCTTTCCAGTATAGCCCTGTTTTTGTAGGAATATTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000438237.6
CDS-3UTR CCA 90 bp ATGCTAATACAAGGTCTCAGTGAATGCCAACAAAACCCTGATACTCTACTACTTTACACCACCAGCATGTaGGGAGCTTCATCGCTCAGG +
Preference number: 4 (lower is better)
Translates to: MLIQGLSECQQNPDTLLLYTTSM*GASSLR
Trigger: CCTGAGCGATGAAGCTCCCCACATGCTGGTGGTGTA...AAGTAGTAGAGTATCAGGGTTTTGTTGGCATTCACTGAGACCTTGTATTAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000438237.6
CDS-3UTR CCA 90 bp AAATCTTTAACAGCTTCCTGCCAACCCCCATCCAGCAGGAAATACTTGCTTATCTCGGCTTCGGGAGCTTaGAGCACTCTTAGAATTCAT +
Preference number: 4 (lower is better)
Translates to: KSLTASCQPPSSRKYLLISASGA*STLRIH
Trigger: ATGAATTCTAAGAGTGCTCCAAGCTCCCGAAGCCGA...GATAAGCAAGTATTTCCTGCTGGATGGGGGTTGGCAGGAAGCTGTTAAAGATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396556.7
CDS-3UTR CCA 90 bp ACGTATACGGTGTGTACACACACGTGCCCCGAATGGCTCTTGAATAAATTCATTATTGGGTGTTCCATGTaGGAGCAAAGTGAGACTTCG +
Preference number: 4 (lower is better)
Translates to: TYTVCTHTCPEWLLNKFIIGCSM*EQSETS
Trigger: CGAAGTCTCACTTTGCTCCCACATGGAACACCCAAT...AATGAATTTATTCAAGAGCCATTCGGGGCACGTGTGTGTACACACCGTATACGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396556.7
CDS-3UTR CCA 90 bp CATAAATCTTTAACAGCTTCCTGCCAACCCCCATCCAGCAGGAAATACTTGCTTTTTTCAGCTGCTCTGTaGAATGTGACTTGGACCCGT +
Preference number: 4 (lower is better)
Translates to: HKSLTASCQPPSSRKYLLFSAAL*NVTWTR
Trigger: ACGGGTCCAAGTCACATTCCACAGAGCAGCTGAAAA...AAGCAAGTATTTCCTGCTGGATGGGGGTTGGCAGGAAGCTGTTAAAGATTTATG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR CCA 90 bp TTACCCACTTTAACCTTGGTGAGTGCAGTATTTAAATGTGTAATCATACTCAGAGGTGTTCGTGACAGCTaGCAGGAGAGCGGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: LPTLTLVSAVFKCVIILRGVRDS*QESGKQ
Trigger: CTGCTTCCCGCTCTCCTGCCAGCTGTCACGAACACC...TCTGAGTATGATTACACATTTAAATACTGCACTCACCAAGGTTAAAGTGGGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR CCA 90 bp TCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGTGAATGCCAACAAAACGAAGCAGGAGATGGGTaGGTGATGGGACACTTGCTC +
Preference number: 4 (lower is better)
Translates to: SLIISWMLIQGLSECQQNEAGDG*VMGHLL
Trigger: GAGCAAGTGTCCCATCACCCACCCATCTCCTGCTTC...GTTTTGTTGGCATTCACTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR CCA 90 bp ATGCTAATACAAGGTCTCAGTGAATGCCAACAAAACCCTGATACTCTACTACTTGAAGCAGGAGATGGGTaGGTGATGGGACACTTGCTC +
Preference number: 4 (lower is better)
Translates to: MLIQGLSECQQNPDTLLLEAGDG*VMGHLL
Trigger: GAGCAAGTGTCCCATCACCCACCCATCTCCTGCTTC...AAGTAGTAGAGTATCAGGGTTTTGTTGGCATTCACTGAGACCTTGTATTAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR CCA 90 bp TCTGAACCAGAATCCAACCTTGAAATCTCCTTCAGTCCACAGCCTGACTCTGGGTACAAACAATGGTGTTaGTTGGGTTGTGCTTCACTT +
Preference number: 4 (lower is better)
Translates to: SEPESNLEISFSPQPDSGYKQWC*LGCASL
Trigger: AAGTGAAGCACAACCCAACCAACACCATTGTTTGTA...CCCAGAGTCAGGCTGTGGACTGAAGGAGATTTCAAGGTTGGATTCTGGTTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR CCA 90 bp ATAGTGGCTTTTAAGGTACTGGTAAACAGGTTTCTTTGCTTAAGCAGTGGCTACGTTGCTGGGTTCCTGTaGGCCTGCTTTAAGACGTGT +
Preference number: 4 (lower is better)
Translates to: IVAFKVLVNRFLCLSSGYVAGFL*ACFKTC
Trigger: ACACGTCTTAAAGCAGGCCCACAGGAACCCAGCAAC...GTAGCCACTGCTTAAGCAAAGAAACCTGTTTACCAGTACCTTAAAAGCCACTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR CCA 90 bp TCTGAACCAGAATCCAACCTTGAAATCTCCTTCAGTCCACAGCCTGACTCTGGGTATTCCAGGAAGGCATaGAGAGGGATACAATTGTAT +
Preference number: 4 (lower is better)
Translates to: SEPESNLEISFSPQPDSGYSRKA*RGIQLY
Trigger: ATACAATTGTATCCCTCTCCATGCCTTCCTGGAATA...CCCAGAGTCAGGCTGTGGACTGAAGGAGATTTCAAGGTTGGATTCTGGTTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR TCA 90 bp GTATATAATTTCTCTCTCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGCTGCTCTGTGGAATGTaGCTTGGACCCGTGCCATCC +
Preference number: 4 (lower is better)
Translates to: VYNFSLSHHFLDANTRSQLLCGM*LGPVPS
Trigger: GGATGGCACGGGTCCAAGTCACATTCCACAGAGCAG...CTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGAGAGAGAAATTATATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR TCA 90 bp TCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGTGAATGCCAACAAAACAACCAATTCAGAGCCTaGGTTTGGCTCTGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: SLIISWMLIQGLSECQQNNQFRA*VWLWLW
Trigger: CCAGAGCCAGAGCCAAACTCAGGCTCTGAATTGGTT...GTTTTGTTGGCATTCACTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR TCA 90 bp TCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGTGAATGCCAACAAAACTACGCTGATCCTCCATaGCGCCCAATTCCGTCTCTT +
Preference number: 4 (lower is better)
Translates to: SLIISWMLIQGLSECQQNYADPP*RPIPSL
Trigger: AAGAGACGGAATTGGGCGTCATGGAGGATCAGCGTA...GTTTTGTTGGCATTCACTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR TCA 90 bp TTCCCCAAACTAAATACAAGATTGAGGCTGTGGTTGTGCATGTTTTCATGTGCACCACGGACATGCCCATaGACTTGCTTTTGGTCCATA +
Preference number: 4 (lower is better)
Translates to: FPKLNTRLRLWLCMFSCAPRTCP*TCFWSI
Trigger: TATGGACCAAAAGCAAGTTCATGGGCATGTCCGTGG...TGCACATGAAAACATGCACAACCACAGCCTCAATCTTGTATTTAGTTTGGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR TCA 90 bp TTTAATATTCCTACAAAAACAGGGCTATACTGGAAAGCTCTGCACCTCCACCCCGTGTGGTTGTGTCGATaGCTTTGGTTTCTCCATTGT +
Preference number: 4 (lower is better)
Translates to: FNIPTKTGLYWKALHLHPVWLCR*LWFLHC
Trigger: ACAATGGAGAAACCAAAGTCATCGACACAACCACAC...GGGGTGGAGGTGCAGAGCTTTCCAGTATAGCCCTGTTTTTGTAGGAATATTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR TCA 90 bp GTTAAGACAATGCTACTCAAAGGGATCTACAGATTCAATGCAATCCCTATCAAACTCCCTTATGGACAGTaGTCGGGCCATGCCAGTTCA +
Preference number: 4 (lower is better)
Translates to: VKTMLLKGIYRFNAIPIKLPYGQ*SGHASS
Trigger: TGAACTGGCATGGCCCGATCACTGTCCATAAGGGAG...TTTGATAGGGATTGCATTGAATCTGTAGATCCCTTTGAGTAGCATTGTCTTAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR TCA 90 bp ACTGAAACCATGGAATATTTATGCAGGCGTTATGTATGTTTTAGTCACAGTGCTCGGCCTGCTCTTCATTaGTGTTGCTGGGTTCCTGTG +
Preference number: 4 (lower is better)
Translates to: TETMEYLCRRYVCFSHSARPALH*CCWVPV
Trigger: CACAGGAACCCAGCAACATCAATGAAGAGCAGGCCG...AGCACTGTGACTAAAACATACATAACGCCTGCATAAATATTCCATGGTTTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR TCA 90 bp ATGCTAATACAAGGTCTCAGTGAATGCCAACAAAACCCTGATACTCTACTACTTAGGGTCCCCACTCAGTaGCCCATAAAGGCAAAGTCT +
Preference number: 4 (lower is better)
Translates to: MLIQGLSECQQNPDTLLLRVPTQ*PIKAKS
Trigger: AGACTTTGCCTTTATGGGTCACTGAGTGGGGACCCT...AAGTAGTAGAGTATCAGGGTTTTGTTGGCATTCACTGAGACCTTGTATTAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR GCA 90 bp ATGCTAATACAAGGTCTCAGTGAATGCCAACAAAACCCTGATACTCTACTACTTTGCACAAGGTTCTTCTaGTGCCCTTCCACCTGGTTC +
Preference number: 4 (lower is better)
Translates to: MLIQGLSECQQNPDTLLLCTRFF*CPSTWF
Trigger: GAACCAGGTGGAAGGGCAGCAGAAGAACCTTGTGCA...AAGTAGTAGAGTATCAGGGTTTTGTTGGCATTCACTGAGACCTTGTATTAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR GCA 90 bp ATTTCTCTCTCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGTGAATGCAGGGACTCAATGGCGTaGACAAGGTTCTTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: ISLSLIISWMLIQGLSECRDSMA*TRFFCC
Trigger: GCAGCAGAAGAACCTTGTGCACGCCATTGAGTCCCT...GCATTCACTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGAGAGAGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR GCA 90 bp TCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGTGAATGCCAACAAAACGCCTGGTGCACACTCTaGTGTAACAAGTTGAGGCAC +
Preference number: 4 (lower is better)
Translates to: SLIISWMLIQGLSECQQNAWCTL*CNKLRH
Trigger: GTGCCTCAACTTGTTACAGCAGAGTGTGCACCAGGC...GTTTTGTTGGCATTCACTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR GCA 90 bp CATAAATCTTTAACAGCTTCCTGCCAACCCCCATCCAGCAGGAAATACTTGCTTGTCCCATTTTTCAGCTaGTCTGTGGAATGTGACTTG +
Preference number: 4 (lower is better)
Translates to: HKSLTASCQPPSSRKYLLVPFFS*SVECDL
Trigger: CAAGTCACATTCCACAGAGCAGCTGAAAAATGGGAC...AAGCAAGTATTTCCTGCTGGATGGGGGTTGGCAGGAAGCTGTTAAAGATTTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR GCA 90 bp TCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGTGAATGCCAACAAAACGACTCCATGGGTCCCTaGTTCTCAAGAGGTCTGATC +
Preference number: 4 (lower is better)
Translates to: SLIISWMLIQGLSECQQNDSMGP*FSRGLI
Trigger: GATCAGACCTCTTGAGAAGCAGGGACCCATGGAGTC...GTTTTGTTGGCATTCACTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR GCA 90 bp ATAGTGGCTTTTAAGGTACTGGTAAACAGGTTTCTTTGCTTAAGCAGTGGCTACGTCCATCCCTTCCCCTaGCTGGTATTTATCCAGTCT +
Preference number: 4 (lower is better)
Translates to: IVAFKVLVNRFLCLSSGYVHPFP*LVFIQS
Trigger: AGACTGGATAAATACCAGGCAGGGGAAGGGATGGAC...GTAGCCACTGCTTAAGCAAAGAAACCTGTTTACCAGTACCTTAAAAGCCACTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR GCA 90 bp ATAGTGGCTTTTAAGGTACTGGTAAACAGGTTTCTTTGCTTAAGCAGTGGCTACGCCACTCTGTGTGTCTaGCGTGTCTTAATACCTCAC +
Preference number: 4 (lower is better)
Translates to: IVAFKVLVNRFLCLSSGYATLCV*RVLIPH
Trigger: GTGAGGTATTAAGACACGGCAGACACACAGAGTGGC...GTAGCCACTGCTTAAGCAAAGAAACCTGTTTACCAGTACCTTAAAAGCCACTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR GCA 90 bp TCTGAACCAGAATCCAACCTTGAAATCTCCTTCAGTCCACAGCCTGACTCTGGGGATCTACAGATTCAATaGAATCCCTATCAAAATCCC +
Preference number: 4 (lower is better)
Translates to: SEPESNLEISFSPQPDSGDLQIQ*NPYQNP
Trigger: GGGATTTTGATAGGGATTGCATTGAATCTGTAGATC...CCCAGAGTCAGGCTGTGGACTGAAGGAGATTTCAAGGTTGGATTCTGGTTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR GCA 90 bp GTTAAGACAATGCTACTCAAAGGGATCTACAGATTCAATGCAATCCCTATCAAATTGCCCAGGCTGGAGTaGAGTGGCTATTCACAGGAG +
Preference number: 4 (lower is better)
Translates to: VKTMLLKGIYRFNAIPIKLPRLE*SGYSQE
Trigger: CTCCTGTGAATAGCCACTGCACTCCAGCCTGGGCAA...TTTGATAGGGATTGCATTGAATCTGTAGATCCCTTTGAGTAGCATTGTCTTAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR CCA 90 bp AAATCTTTAACAGCTTCCTGCCAACCCCCATCCAGCAGGAAATACTTGCTTATCTTTCCATGTGGTATTTaGCACAAGCTCGAAGCTGAG +
Preference number: 4 (lower is better)
Translates to: KSLTASCQPPSSRKYLLIFPCGI*HKLEAE
Trigger: CTCAGCTTCGAGCTTGTGCCAAATACCACATGGAAA...GATAAGCAAGTATTTCCTGCTGGATGGGGGTTGGCAGGAAGCTGTTAAAGATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396556.7
CDS-3UTR CCA 90 bp ACGTATACGGTGTGTACACACACGTGCCCCGAATGGCTCTTGAATAAATTCATTTTTCCATGTGGTATTTaGCACAAGCTCGAAGCTGAG +
Preference number: 4 (lower is better)
Translates to: TYTVCTHTCPEWLLNKFIFPCGI*HKLEAE
Trigger: CTCAGCTTCGAGCTTGTGCCAAATACCACATGGAAA...AATGAATTTATTCAAGAGCCATTCGGGGCACGTGTGTGTACACACCGTATACGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000438237.6
CDS-3UTR CCA 90 bp ATACTCTACTACTTTAATATTCCTACAAAAACAGGGCTATACTGGAAAGCTCTGCGGAATACTGACTCTTaGCTCTTCGGGCGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: ILYYFNIPTKTGLYWKALRNTDS*LFGRLQ
Trigger: CTGCAGCCGCCCGAAGAGCCAAGAGTCAGTATTCCG...CAGAGCTTTCCAGTATAGCCCTGTTTTTGTAGGAATATTAAAGTAGTAGAGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396556.7
CDS-3UTR CCA 90 bp TCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGTGAATGCCAACAAAACCTGGCAGGGACTCAATaGCGTGCACAAGGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: SLIISWMLIQGLSECQQNLAGTQ*RAQGSS
Trigger: AGAAGAACCTTGTGCACGCCATTGAGTCCCTGCCAG...GTTTTGTTGGCATTCACTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR CCA 90 bp AAATCTTTAACAGCTTCCTGCCAACCCCCATCCAGCAGGAAATACTTGCTTATCTGGGAAGCACCACCTTaGTCAAATCCATTCCAAGTT +
Preference number: 4 (lower is better)
Translates to: KSLTASCQPPSSRKYLLIWEAPP*SNPFQV
Trigger: AACTTGGAATGGATTTGACCAAGGTGGTGCTTCCCA...GATAAGCAAGTATTTCCTGCTGGATGGGGGTTGGCAGGAAGCTGTTAAAGATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR CCA 90 bp TTTAATATTCCTACAAAAACAGGGCTATACTGGAAAGCTCTGCACCTCCACCCCTGGGAAGCACCACCTTaGTCAAATCCATTCCAAGTT +
Preference number: 4 (lower is better)
Translates to: FNIPTKTGLYWKALHLHPWEAPP*SNPFQV
Trigger: AACTTGGAATGGATTTGACCAAGGTGGTGCTTCCCA...GGGGTGGAGGTGCAGAGCTTTCCAGTATAGCCCTGTTTTTGTAGGAATATTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR CCA 90 bp TTACCCACTTTAACCTTGGTGAGTGCAGTATTTAAATGTGTAATCATACTCAGAGGTTGTAGGGCTTCTTaGCTAAAGCGCCCTTGCGGC +
Preference number: 4 (lower is better)
Translates to: LPTLTLVSAVFKCVIILRGCRAS*LKRPCG
Trigger: GCCGCAAGGGCGCTTTAGCCAAGAAGCCCTACAACC...TCTGAGTATGATTACACATTTAAATACTGCACTCACCAAGGTTAAAGTGGGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR CCA 90 bp ATACTCTACTACTTTAATATTCCTACAAAAACAGGGCTATACTGGAAAGCTCTGAGGGTCATCGGCCATTaGGTGTTCGTGACAGCTGGC +
Preference number: 4 (lower is better)
Translates to: ILYYFNIPTKTGLYWKALRVIGH*VFVTAG
Trigger: GCCAGCTGTCACGAACACCCAATGGCCGATGACCCT...CAGAGCTTTCCAGTATAGCCCTGTTTTTGTAGGAATATTAAAGTAGTAGAGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR CCA 90 bp TTTAATATTCCTACAAAAACAGGGCTATACTGGAAAGCTCTGCACCTCCACCCCGGGCTTTACAAACAATaGTGTTGGTTGGGTTGTGCT +
Preference number: 4 (lower is better)
Translates to: FNIPTKTGLYWKALHLHPGLYKQ*CWLGCA
Trigger: AGCACAACCCAACCAACACCATTGTTTGTAAAGCCC...GGGGTGGAGGTGCAGAGCTTTCCAGTATAGCCCTGTTTTTGTAGGAATATTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR CCA 90 bp ACTGAAACCATGGAATATTTATGCAGGCGTTATGTATGTTTTAGTCACAGTGCTCTCCTTGGTGGGCCTTaGCTCTTAGTTGTCCCAGAG +
Preference number: 4 (lower is better)
Translates to: TETMEYLCRRYVCFSHSALLGGP*LLVVPE
Trigger: CTCTGGGACAACTAAGAGCCAAGGCCCACCAAGGAG...AGCACTGTGACTAAAACATACATAACGCCTGCATAAATATTCCATGGTTTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR CCA 90 bp TTACCCACTTTAACCTTGGTGAGTGCAGTATTTAAATGTGTAATCATACTCAGAAGGTTTTACCTCACCTaGGCAGGGCTCCCACACAGG +
Preference number: 4 (lower is better)
Translates to: LPTLTLVSAVFKCVIILRRFYLT*AGLPHR
Trigger: CCTGTGTGGGAGCCCTGCCCAGGTGAGGTAAAACCT...TCTGAGTATGATTACACATTTAAATACTGCACTCACCAAGGTTAAAGTGGGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR TCA 90 bp GTATATAATTTCTCTCTCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGTCTGCTGTAACAAGTTaGGGCACTCCCCAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: VYNFSLSHHFLDANTRSQSAVTS*GTPQGS
Trigger: GCTGCCTTGGGGAGTGCCTCAACTTGTTACAGCAGA...CTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGAGAGAGAAATTATATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR TCA 90 bp ATTTCTCTCTCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGTGAATGCTATGTTGGCACTGGCTaGTGGCAAAGAGCCAAGTGT +
Preference number: 4 (lower is better)
Translates to: ISLSLIISWMLIQGLSECYVGTG*WQRAKC
Trigger: ACACTTGGCTCTTTGCCATCAGCCAGTGCCAACATA...GCATTCACTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGAGAGAGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR TCA 90 bp ATACTCTACTACTTTAATATTCCTACAAAAACAGGGCTATACTGGAAAGCTCTGCTCTGGCTCTGGCTGTaGGGTTTGTTCGTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: ILYYFNIPTKTGLYWKALLWLWL*GLFVFS
Trigger: GCTGAAGACGAACAAACCTCACAGCCAGAGCCAGAG...CAGAGCTTTCCAGTATAGCCCTGTTTTTGTAGGAATATTAAAGTAGTAGAGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR TCA 90 bp ATTTCTCTCTCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGTGAATGCACTCAACGAAGCAAATaGCTCTCTCCTCTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: ISLSLIISWMLIQGLSECTQRSK*LSPLVW
Trigger: CCACACCAGAGGAGAGAGTCATTTGCTTCGTTGAGT...GCATTCACTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGAGAGAGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR TCA 90 bp ATTTCTCTCTCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGTGAATGCGAAATGTCTCGCCTATaGTGGGGTTGTAGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: ISLSLIISWMLIQGLSECEMSRL*WGCRAS
Trigger: AGAAGCCCTACAACCCCATCATAGGCGAGACATTTC...GCATTCACTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGAGAGAGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR TCA 90 bp TCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGTGAATGCCAACAAAACACTTCCCAGGAGCAGTaGAATGTCTCGCCTATGATG +
Preference number: 4 (lower is better)
Translates to: SLIISWMLIQGLSECQQNTSQEQ*NVSPMM
Trigger: CATCATAGGCGAGACATTTCACTGCTCCTGGGAAGT...GTTTTGTTGGCATTCACTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR TCA 90 bp ATTTCTCTCTCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGTGAATGCCCACGGACATGCCCATaGACTTGCTTTTGGTCCATA +
Preference number: 4 (lower is better)
Translates to: ISLSLIISWMLIQGLSECPRTCP*TCFWSI
Trigger: TATGGACCAAAAGCAAGTTCATGGGCATGTCCGTGG...GCATTCACTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGAGAGAGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR TCA 90 bp TCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGTGAATGCCAACAAAACGAATATCACTGTCGCTaGGTACCCAGTCTTGGCACA +
Preference number: 4 (lower is better)
Translates to: SLIISWMLIQGLSECQQNEYHCR*VPSLGT
Trigger: TGTGCCAAGACTGGGTACTCAGCGACAGTGATATTC...GTTTTGTTGGCATTCACTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR TCA 90 bp ATTTCTCTCTCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGTGAATGCGAATATCACTGTCGCTaGGTACCCAGTCTTGGCACA +
Preference number: 4 (lower is better)
Translates to: ISLSLIISWMLIQGLSECEYHCR*VPSLGT
Trigger: TGTGCCAAGACTGGGTACTCAGCGACAGTGATATTC...GCATTCACTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGAGAGAGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR TCA 90 bp ATGCTAATACAAGGTCTCAGTGAATGCCAACAAAACCCTGATACTCTACTACTTGAATATCACTGTCGCTaGGTACCCAGTCTTGGCACA +
Preference number: 4 (lower is better)
Translates to: MLIQGLSECQQNPDTLLLEYHCR*VPSLGT
Trigger: TGTGCCAAGACTGGGTACTCAGCGACAGTGATATTC...AAGTAGTAGAGTATCAGGGTTTTGTTGGCATTCACTGAGACCTTGTATTAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR TCA 90 bp CTGGTCTTAAGAAAGCAGACAAAAGGCACAAAATTAGTATTACTACAGAGAAGCGGCAGCCAGCTCTTGTaGGAAACTGTGTGGCAATTC +
Preference number: 4 (lower is better)
Translates to: LVLRKQTKGTKLVLLQRSGSQLL*ETVWQF
Trigger: GAATTGCCACACAGTTTCTCACAAGAGCTGGCTGCC...GCTTCTCTGTAGTAATACTAATTTTGTGCCTTTTGTCTGCTTTCTTAAGACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR GCA 90 bp ATACTCTACTACTTTAATATTCCTACAAAAACAGGGCTATACTGGAAAGCTCTGACGAAGTACCTGTTCTaGCAGCCCTGGAGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: ILYYFNIPTKTGLYWKALTKYLF*QPWRRL
Trigger: CAACCTCCTCCAGGGCTGGCAGAACAGGTACTTCGT...CAGAGCTTTCCAGTATAGCCCTGTTTTTGTAGGAATATTAAAGTAGTAGAGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000438237.6
CDS-3UTR GCA 90 bp ATGCTAATACAAGGTCTCAGTGAATGCCAACAAAACCCTGATACTCTACTACTTACAAGGTTCTTCTGCTaGCCTTCCACCTGGTTCATC +
Preference number: 4 (lower is better)
Translates to: MLIQGLSECQQNPDTLLLTRFFC*PSTWFI
Trigger: GATGAACCAGGTGGAAGGGCAGCAGAAGAACCTTGT...AAGTAGTAGAGTATCAGGGTTTTGTTGGCATTCACTGAGACCTTGTATTAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR GCA 90 bp GTTAAGACAATGCTACTCAAAGGGATCTACAGATTCAATGCAATCCCTATCAAATGTGACTTGGACCCGTaGCATCCCAGGATGTTTTCC +
Preference number: 4 (lower is better)
Translates to: VKTMLLKGIYRFNAIPIKCDLDP*HPRMFS
Trigger: GGAAAACATCCTGGGATGGCACGGGTCCAAGTCACA...TTTGATAGGGATTGCATTGAATCTGTAGATCCCTTTGAGTAGCATTGTCTTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR GCA 90 bp ATTTCTCTCTCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGTGAATGCTCCACCCCATCAGTGTaGTTTCCAGAGGGGATTGAA +
Preference number: 4 (lower is better)
Translates to: ISLSLIISWMLIQGLSECSTPSV*FPEGIE
Trigger: TTCAATCCCCTCTGGAAAGCACACTGATGGGGTGGA...GCATTCACTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGAGAGAGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR GCA 90 bp ATGCTAATACAAGGTCTCAGTGAATGCCAACAAAACCCTGATACTCTACTACTTTATACTGGAAAGCTCTaGACCTCCACCCCATCAGTG +
Preference number: 4 (lower is better)
Translates to: MLIQGLSECQQNPDTLLLYTGKL*TSTPSV
Trigger: CACTGATGGGGTGGAGGTGCAGAGCTTTCCAGTATA...AAGTAGTAGAGTATCAGGGTTTTGTTGGCATTCACTGAGACCTTGTATTAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR GCA 90 bp TTACCCACTTTAACCTTGGTGAGTGCAGTATTTAAATGTGTAATCATACTCAGAACCCAGCCATCGCCCTaGAAGAGAAGAAAGGAGGCA +
Preference number: 4 (lower is better)
Translates to: LPTLTLVSAVFKCVIILRTQPSP*KRRKEA
Trigger: TGCCTCCTTTCTTCTCTTGCAGGGCGATGGCTGGGT...TCTGAGTATGATTACACATTTAAATACTGCACTCACCAAGGTTAAAGTGGGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR CCA 90 bp CTGGTCTTAAGAAAGCAGACAAAAGGCACAAAATTAGTATTACTACAGAGAAGCCTGGCAGGGACTCAATaGCGTGCACAAGGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: LVLRKQTKGTKLVLLQRSLAGTQ*RAQGSS
Trigger: AGAAGAACCTTGTGCACGCCATTGAGTCCCTGCCAG...GCTTCTCTGTAGTAATACTAATTTTGTGCCTTTTGTCTGCTTTCTTAAGACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR CCA 90 bp TTACCCACTTTAACCTTGGTGAGTGCAGTATTTAAATGTGTAATCATACTCAGACTGTGGAATGTGACTTaGACCCGTGCCATCCCAGGA +
Preference number: 4 (lower is better)
Translates to: LPTLTLVSAVFKCVIILRLWNVT*TRAIPG
Trigger: TCCTGGGATGGCACGGGTCCAAGTCACATTCCACAG...TCTGAGTATGATTACACATTTAAATACTGCACTCACCAAGGTTAAAGTGGGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR CCA 90 bp TTCCCCAAACTAAATACAAGATTGAGGCTGTGGTTGTGCATGTTTTCATGTGCAAGGTTATGTTGGCACTaGCTGATGGCAAAGAGCCAA +
Preference number: 4 (lower is better)
Translates to: FPKLNTRLRLWLCMFSCARLCWH*LMAKSQ
Trigger: TTGGCTCTTTGCCATCAGCCAGTGCCAACATAACCT...TGCACATGAAAACATGCACAACCACAGCCTCAATCTTGTATTTAGTTTGGGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR CCA 90 bp ATTTCTCTCTCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGTGAATGCTTGCCCAGGTTATGTTaGCACTGGCTGATGGCAAAG +
Preference number: 4 (lower is better)
Translates to: ISLSLIISWMLIQGLSECLPRLC*HWLMAK
Trigger: CTTTGCCATCAGCCAGTGCCAACATAACCTGGGCAA...GCATTCACTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGAGAGAGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR CCA 90 bp CATAAATCTTTAACAGCTTCCTGCCAACCCCCATCCAGCAGGAAATACTTGCTTTTAGTTTGTAGCTTTTaGAAGGGTCATCGGCCATTG +
Preference number: 4 (lower is better)
Translates to: HKSLTASCQPPSSRKYLLLVCSF*KGHRPL
Trigger: CAATGGCCGATGACCCTTCCAAAAGCTACAAACTAA...AAGCAAGTATTTCCTGCTGGATGGGGGTTGGCAGGAAGCTGTTAAAGATTTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR CCA 90 bp TCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGTGAATGCCAACAAAACAGTAGAAGCAGGAGATaGGTGGGTGATGGGACACTT +
Preference number: 4 (lower is better)
Translates to: SLIISWMLIQGLSECQQNSRSRR*VGDGTL
Trigger: AAGTGTCCCATCACCCACCCATCTCCTGCTTCTACT...GTTTTGTTGGCATTCACTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR CCA 90 bp GTATATAATTTCTCTCTCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGGGTTCCTGGACTCCATaGGTCCCTGCTTCTCAAGAG +
Preference number: 4 (lower is better)
Translates to: VYNFSLSHHFLDANTRSQGSWTP*VPASQE
Trigger: CTCTTGAGAAGCAGGGACCCATGGAGTCCAGGAACC...CTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGAGAGAGAAATTATATAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR CCA 90 bp ACTGAAACCATGGAATATTTATGCAGGCGTTATGTATGTTTTAGTCACAGTGCTGGGTGGAAAACTCCTTaGTGGGCCTTGGCTCTTAGT +
Preference number: 4 (lower is better)
Translates to: TETMEYLCRRYVCFSHSAGWKTP*WALALS
Trigger: ACTAAGAGCCAAGGCCCACCAAGGAGTTTTCCACCC...AGCACTGTGACTAAAACATACATAACGCCTGCATAAATATTCCATGGTTTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR CCA 90 bp ACGTATACGGTGTGTACACACACGTGCCCCGAATGGCTCTTGAATAAATTCATTGTATTTATCCAGTCTTaGGGGCTCAGCAAGAAAAAC +
Preference number: 4 (lower is better)
Translates to: TYTVCTHTCPEWLLNKFIVFIQS*GLSKKN
Trigger: GTTTTTCTTGCTGAGCCCCCAAGACTGGATAAATAC...AATGAATTTATTCAAGAGCCATTCGGGGCACGTGTGTGTACACACCGTATACGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR CCA 90 bp ATACTCTACTACTTTAATATTCCTACAAAAACAGGGCTATACTGGAAAGCTCTGACCCAGGTGTTGAGATaGCCTGTGAGGCACTCCTCA +
Preference number: 4 (lower is better)
Translates to: ILYYFNIPTKTGLYWKALTQVLR*PVRHSS
Trigger: TGAGGAGTGCCTCACAGGCCATCTCAACACCTGGGT...CAGAGCTTTCCAGTATAGCCCTGTTTTTGTAGGAATATTAAAGTAGTAGAGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR CCA 90 bp CATAAATCTTTAACAGCTTCCTGCCAACCCCCATCCAGCAGGAAATACTTGCTTGTATTGGTGAGGATGTaGAGAAATTGGATCCCTTGT +
Preference number: 4 (lower is better)
Translates to: HKSLTASCQPPSSRKYLLVLVRM*RNWIPC
Trigger: ACAAGGGATCCAATTTCTCCACATCCTCACCAATAC...AAGCAAGTATTTCCTGCTGGATGGGGGTTGGCAGGAAGCTGTTAAAGATTTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR TCA 90 bp ATACTCTACTACTTTAATATTCCTACAAAAACAGGGCTATACTGGAAAGCTCTGTACGCTGATCCTCCATaGCGCCCAATTCCGTCTCTT +
Preference number: 4 (lower is better)
Translates to: ILYYFNIPTKTGLYWKALYADPP*RPIPSL
Trigger: AAGAGACGGAATTGGGCGTCATGGAGGATCAGCGTA...CAGAGCTTTCCAGTATAGCCCTGTTTTTGTAGGAATATTAAAGTAGTAGAGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR TCA 90 bp TTACCCACTTTAACCTTGGTGAGTGCAGTATTTAAATGTGTAATCATACTCAGATACGCTGATCCTCCATaGCGCCCAATTCCGTCTCTT +
Preference number: 4 (lower is better)
Translates to: LPTLTLVSAVFKCVIILRYADPP*RPIPSL
Trigger: AAGAGACGGAATTGGGCGTCATGGAGGATCAGCGTA...TCTGAGTATGATTACACATTTAAATACTGCACTCACCAAGGTTAAAGTGGGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR TCA 90 bp ACTGAAACCATGGAATATTTATGCAGGCGTTATGTATGTTTTAGTCACAGTGCTACTTCCCAGGAGCAGTaGAATGTCTCGCCTATGATG +
Preference number: 4 (lower is better)
Translates to: TETMEYLCRRYVCFSHSATSQEQ*NVSPMM
Trigger: CATCATAGGCGAGACATTTCACTGCTCCTGGGAAGT...AGCACTGTGACTAAAACATACATAACGCCTGCATAAATATTCCATGGTTTCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR TCA 90 bp GTTAAGACAATGCTACTCAAAGGGATCTACAGATTCAATGCAATCCCTATCAAACCACGGACATGCCCATaGACTTGCTTTTGGTCCATA +
Preference number: 4 (lower is better)
Translates to: VKTMLLKGIYRFNAIPIKPRTCP*TCFWSI
Trigger: TATGGACCAAAAGCAAGTTCATGGGCATGTCCGTGG...TTTGATAGGGATTGCATTGAATCTGTAGATCCCTTTGAGTAGCATTGTCTTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR TCA 90 bp ATACTCTACTACTTTAATATTCCTACAAAAACAGGGCTATACTGGAAAGCTCTGCTTTCCAGAGGGGATTaGAGTATACCCAGCCATCGC +
Preference number: 4 (lower is better)
Translates to: ILYYFNIPTKTGLYWKALLSRGD*SIPSHR
Trigger: GCGATGGCTGGGTATACTTCAATCCCCTCTGGAAAG...CAGAGCTTTCCAGTATAGCCCTGTTTTTGTAGGAATATTAAAGTAGTAGAGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR TCA 90 bp TTCCCCAAACTAAATACAAGATTGAGGCTGTGGTTGTGCATGTTTTCATGTGCATACTTCTACCAGGAATaGGCCACTTTCTCCCTTATG +
Preference number: 4 (lower is better)
Translates to: FPKLNTRLRLWLCMFSCAYFYQE*ATFSLM
Trigger: CATAAGGGAGAAAGTGGCTCATTCCTGGTAGAAGTA...TGCACATGAAAACATGCACAACCACAGCCTCAATCTTGTATTTAGTTTGGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR TCA 90 bp ACTGAAACCATGGAATATTTATGCAGGCGTTATGTATGTTTTAGTCACAGTGCTGCTGACATGCTTTTCTaGCATAGGGATACTGGAGGG +
Preference number: 4 (lower is better)
Translates to: TETMEYLCRRYVCFSHSAADMLF*HRDTGG
Trigger: CCCTCCAGTATCCCTATGTCAGAAAAGCATGTCAGC...AGCACTGTGACTAAAACATACATAACGCCTGCATAAATATTCCATGGTTTCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR TCA 90 bp TTACCCACTTTAACCTTGGTGAGTGCAGTATTTAAATGTGTAATCATACTCAGATTTATCACTGGAAGATaGGTGGCATCTGCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: LPTLTLVSAVFKCVIILRFITGR*VASAPA
Trigger: GGCTGGGGCAGATGCCACTCATCTTCCAGTGATAAA...TCTGAGTATGATTACACATTTAAATACTGCACTCACCAAGGTTAAAGTGGGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR TCA 90 bp ATAGTGGCTTTTAAGGTACTGGTAAACAGGTTTCTTTGCTTAAGCAGTGGCTACACCAGAATCCAACCTTaGAATCTCCTTCAGTCCACA +
Preference number: 4 (lower is better)
Translates to: IVAFKVLVNRFLCLSSGYTRIQP*NLLQST
Trigger: TGTGGACTGAAGGAGATTTCAAGGTTGGATTCTGGT...GTAGCCACTGCTTAAGCAAAGAAACCTGTTTACCAGTACCTTAAAAGCCACTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR GCA 90 bp TTACCCACTTTAACCTTGGTGAGTGCAGTATTTAAATGTGTAATCATACTCAGAAGGGACTCAATGGCGTaGACAAGGTTCTTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LPTLTLVSAVFKCVIILRRDSMA*TRFFCC
Trigger: GCAGCAGAAGAACCTTGTGCACGCCATTGAGTCCCT...TCTGAGTATGATTACACATTTAAATACTGCACTCACCAAGGTTAAAGTGGGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR GCA 90 bp TTACCCACTTTAACCTTGGTGAGTGCAGTATTTAAATGTGTAATCATACTCAGATGTGACTTGGACCCGTaGCATCCCAGGATGTTTTCC +
Preference number: 4 (lower is better)
Translates to: LPTLTLVSAVFKCVIILRCDLDP*HPRMFS
Trigger: GGAAAACATCCTGGGATGGCACGGGTCCAAGTCACA...TCTGAGTATGATTACACATTTAAATACTGCACTCACCAAGGTTAAAGTGGGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR GCA 90 bp GTATATAATTTCTCTCTCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGTGTGACTTGGACCCGTaGCATCCCAGGATGTTTTCC +
Preference number: 4 (lower is better)
Translates to: VYNFSLSHHFLDANTRSQCDLDP*HPRMFS
Trigger: GGAAAACATCCTGGGATGGCACGGGTCCAAGTCACA...CTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGAGAGAGAAATTATATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR GCA 90 bp GTTAAGACAATGCTACTCAAAGGGATCTACAGATTCAATGCAATCCCTATCAAAGTGTTGGTTGGGTTGTaGTTCACTTCTGCGGTAACC +
Preference number: 4 (lower is better)
Translates to: VKTMLLKGIYRFNAIPIKVLVGL*FTSAVT
Trigger: GGTTACCGCAGAAGTGAAGCACAACCCAACCAACAC...TTTGATAGGGATTGCATTGAATCTGTAGATCCCTTTGAGTAGCATTGTCTTAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR GCA 90 bp TTCCCCAAACTAAATACAAGATTGAGGCTGTGGTTGTGCATGTTTTCATGTGCAACAGGCAGGCTGACATaGTTTTCTGACATAGGGATA +
Preference number: 4 (lower is better)
Translates to: FPKLNTRLRLWLCMFSCATGRLT*FSDIGI
Trigger: TATCCCTATGTCAGAAAAGCATGTCAGCCTGCCTGT...TGCACATGAAAACATGCACAACCACAGCCTCAATCTTGTATTTAGTTTGGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR CCA 90 bp TTACCCACTTTAACCTTGGTGAGTGCAGTATTTAAATGTGTAATCATACTCAGACTGTTCTGCCAGCCCTaGAGGAGGTTGGTGTATTTG +
Preference number: 4 (lower is better)
Translates to: LPTLTLVSAVFKCVIILRLFCQP*RRLVYL
Trigger: CAAATACACCAACCTCCTCCAGGGCTGGCAGAACAG...TCTGAGTATGATTACACATTTAAATACTGCACTCACCAAGGTTAAAGTGGGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000438237.6
CDS-3UTR CCA 90 bp ATACTCTACTACTTTAATATTCCTACAAAAACAGGGCTATACTGGAAAGCTCTGCTGTTCTGCCAGCCCTaGAGGAGGTTGGTGTATTTG +
Preference number: 4 (lower is better)
Translates to: ILYYFNIPTKTGLYWKALLFCQP*RRLVYL
Trigger: CAAATACACCAACCTCCTCCAGGGCTGGCAGAACAG...CAGAGCTTTCCAGTATAGCCCTGTTTTTGTAGGAATATTAAAGTAGTAGAGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000438237.6
CDS-3UTR CCA 90 bp ATACTCTACTACTTTAATATTCCTACAAAAACAGGGCTATACTGGAAAGCTCTGAGGGAGACGCAGAATTaGGTGTTCCATGTGGGAGCA +
Preference number: 4 (lower is better)
Translates to: ILYYFNIPTKTGLYWKALRETQN*VFHVGA
Trigger: TGCTCCCACATGGAACACCCAATTCTGCGTCTCCCT...CAGAGCTTTCCAGTATAGCCCTGTTTTTGTAGGAATATTAAAGTAGTAGAGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396556.7
CDS-3UTR CCA 90 bp TTACCCACTTTAACCTTGGTGAGTGCAGTATTTAAATGTGTAATCATACTCAGACTGGCAGGGACTCAATaGCGTGCACAAGGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: LPTLTLVSAVFKCVIILRLAGTQ*RAQGSS
Trigger: AGAAGAACCTTGTGCACGCCATTGAGTCCCTGCCAG...TCTGAGTATGATTACACATTTAAATACTGCACTCACCAAGGTTAAAGTGGGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR CCA 90 bp TCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGTGAATGCCAACAAAACTTTTCAGCTGCTCTGTaGAATGTGACTTGGACCCGT +
Preference number: 4 (lower is better)
Translates to: SLIISWMLIQGLSECQQNFSAAL*NVTWTR
Trigger: ACGGGTCCAAGTCACATTCCACAGAGCAGCTGAAAA...GTTTTGTTGGCATTCACTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR CCA 90 bp ATTTCTCTCTCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGTGAATGCTTTTCAGCTGCTCTGTaGAATGTGACTTGGACCCGT +
Preference number: 4 (lower is better)
Translates to: ISLSLIISWMLIQGLSECFSAAL*NVTWTR
Trigger: ACGGGTCCAAGTCACATTCCACAGAGCAGCTGAAAA...GCATTCACTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGAGAGAGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR CCA 90 bp ATGCTAATACAAGGTCTCAGTGAATGCCAACAAAACCCTGATACTCTACTACTTAGGTTATGTTGGCACTaGCTGATGGCAAAGAGCCAA +
Preference number: 4 (lower is better)
Translates to: MLIQGLSECQQNPDTLLLRLCWH*LMAKSQ
Trigger: TTGGCTCTTTGCCATCAGCCAGTGCCAACATAACCT...AAGTAGTAGAGTATCAGGGTTTTGTTGGCATTCACTGAGACCTTGTATTAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR CCA 90 bp ATTTCTCTCTCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGTGAATGCCTTCTTGGGATACACTaGCAGTGTGGTTGTGTCGAT +
Preference number: 4 (lower is better)
Translates to: ISLSLIISWMLIQGLSECLLGIH*QCGCVD
Trigger: ATCGACACAACCACACTGCCAGTGTATCCCAAGAAG...GCATTCACTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGAGAGAGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR CCA 90 bp ATTTCTCTCTCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGTGAATGCAAAACAGGGCTATACTaGAAAGCTCTGCACCTCCAC +
Preference number: 4 (lower is better)
Translates to: ISLSLIISWMLIQGLSECKTGLY*KALHLH
Trigger: GTGGAGGTGCAGAGCTTTCCAGTATAGCCCTGTTTT...GCATTCACTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGAGAGAGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR CCA 90 bp ATTTCTCTCTCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGTGAATGCTGGAAAACTCCTTGGTaGGCCTTGGCTCTTAGTTGT +
Preference number: 4 (lower is better)
Translates to: ISLSLIISWMLIQGLSECWKTPW*ALALSC
Trigger: ACAACTAAGAGCCAAGGCCCACCAAGGAGTTTTCCA...GCATTCACTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGAGAGAGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR CCA 90 bp TTTAATATTCCTACAAAAACAGGGCTATACTGGAAAGCTCTGCACCTCCACCCCAATCTGTTTTATCACTaGAAGATGAGTGGCATCTGC +
Preference number: 4 (lower is better)
Translates to: FNIPTKTGLYWKALHLHPNLFYH*KMSGIC
Trigger: GCAGATGCCACTCATCTTCCAGTGATAAAACAGATT...GGGGTGGAGGTGCAGAGCTTTCCAGTATAGCCCTGTTTTTGTAGGAATATTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR CCA 90 bp ACGTATACGGTGTGTACACACACGTGCCCCGAATGGCTCTTGAATAAATTCATTTTCAACAAATGGTGTTaGGGAAACTGGATATCCACA +
Preference number: 4 (lower is better)
Translates to: TYTVCTHTCPEWLLNKFIFNKWC*GNWIST
Trigger: TGTGGATATCCAGTTTCCCCAACACCATTTGTTGAA...AATGAATTTATTCAAGAGCCATTCGGGGCACGTGTGTGTACACACCGTATACGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR TCA 90 bp TTACCCACTTTAACCTTGGTGAGTGCAGTATTTAAATGTGTAATCATACTCAGAGCACAAGCTCGAAGCTaGGTCACCCAGAATTGTTTC +
Preference number: 4 (lower is better)
Translates to: LPTLTLVSAVFKCVIILRAQARS*VTQNCF
Trigger: GAAACAATTCTGGGTGACTCAGCTTCGAGCTTGTGC...TCTGAGTATGATTACACATTTAAATACTGCACTCACCAAGGTTAAAGTGGGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000438237.6
CDS-3UTR TCA 90 bp ATACTCTACTACTTTAATATTCCTACAAAAACAGGGCTATACTGGAAAGCTCTGTATGTTGGCACTGGCTaGTGGCAAAGAGCCAAGTGT +
Preference number: 4 (lower is better)
Translates to: ILYYFNIPTKTGLYWKALYVGTG*WQRAKC
Trigger: ACACTTGGCTCTTTGCCATCAGCCAGTGCCAACATA...CAGAGCTTTCCAGTATAGCCCTGTTTTTGTAGGAATATTAAAGTAGTAGAGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR TCA 90 bp ATTTCTCTCTCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGTGAATGCAGAATTATACTACGCTaGTCCTCCATGACGCCCAAT +
Preference number: 4 (lower is better)
Translates to: ISLSLIISWMLIQGLSECRIILR*SSMTPN
Trigger: ATTGGGCGTCATGGAGGATCAGCGTAGTATAATTCT...GCATTCACTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGAGAGAGAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR TCA 90 bp ATGCTAATACAAGGTCTCAGTGAATGCCAACAAAACCCTGATACTCTACTACTTAGAATTATACTACGCTaGTCCTCCATGACGCCCAAT +
Preference number: 4 (lower is better)
Translates to: MLIQGLSECQQNPDTLLLRIILR*SSMTPN
Trigger: ATTGGGCGTCATGGAGGATCAGCGTAGTATAATTCT...AAGTAGTAGAGTATCAGGGTTTTGTTGGCATTCACTGAGACCTTGTATTAGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR TCA 90 bp TTACCCACTTTAACCTTGGTGAGTGCAGTATTTAAATGTGTAATCATACTCAGAACTCAACGAAGCAAATaGCTCTCTCCTCTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: LPTLTLVSAVFKCVIILRTQRSK*LSPLVW
Trigger: CCACACCAGAGGAGAGAGTCATTTGCTTCGTTGAGT...TCTGAGTATGATTACACATTTAAATACTGCACTCACCAAGGTTAAAGTGGGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR TCA 90 bp GTATATAATTTCTCTCTCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGGAAATGTCTCGCCTATaGTGGGGTTGTAGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: VYNFSLSHHFLDANTRSQEMSRL*WGCRAS
Trigger: AGAAGCCCTACAACCCCATCATAGGCGAGACATTTC...CTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGAGAGAGAAATTATATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR TCA 90 bp TTCCCCAAACTAAATACAAGATTGAGGCTGTGGTTGTGCATGTTTTCATGTGCACTCCATTGTTGTAGGTaGACTCTAAAGTACCATTCC +
Preference number: 4 (lower is better)
Translates to: FPKLNTRLRLWLCMFSCALHCCR*TLKYHS
Trigger: GGAATGGTACTTTAGAGTTCACCTACAACAATGGAG...TGCACATGAAAACATGCACAACCACAGCCTCAATCTTGTATTTAGTTTGGGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR TCA 90 bp TCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGTGAATGCCAACAAAACGTGTGGTTGTGTCGATaGCTTTGGTTTCTCCATTGT +
Preference number: 4 (lower is better)
Translates to: SLIISWMLIQGLSECQQNVWLCR*LWFLHC
Trigger: ACAATGGAGAAACCAAAGTCATCGACACAACCACAC...GTTTTGTTGGCATTCACTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR GCA 90 bp TCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGTGAATGCCAACAAAACCAAAATACTGCAGGATaGCAGCCTCGAAATCCAGTA +
Preference number: 4 (lower is better)
Translates to: SLIISWMLIQGLSECQQNQNTAG*QPRNPV
Trigger: TACTGGATTTCGAGGCTGGCATCCTGCAGTATTTTG...GTTTTGTTGGCATTCACTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000438237.6
CDS-3UTR GCA 90 bp TTTAATATTCCTACAAAAACAGGGCTATACTGGAAAGCTCTGCACCTCCACCCCTTCTGGTGTTTGCTTTaGTCATTCACAAAATACTGC +
Preference number: 4 (lower is better)
Translates to: FNIPTKTGLYWKALHLHPFWCLL*SFTKYC
Trigger: GCAGTATTTTGTGAATGAGCAAAGCAAACACCAGAA...GGGGTGGAGGTGCAGAGCTTTCCAGTATAGCCCTGTTTTTGTAGGAATATTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000438237.6
CDS-3UTR GCA 90 bp AAATCTTTAACAGCTTCCTGCCAACCCCCATCCAGCAGGAAATACTTGCTTATCGAATTGTTTCTCTTTTaGATCAGCAGCTCTCAGTTT +
Preference number: 4 (lower is better)
Translates to: KSLTASCQPPSSRKYLLIELFLF*ISSSQF
Trigger: AAACTGAGAGCTGCTGATGCAAAAGAGAAACAATTC...GATAAGCAAGTATTTCCTGCTGGATGGGGGTTGGCAGGAAGCTGTTAAAGATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396556.7
CDS-3UTR GCA 90 bp TTTAATATTCCTACAAAAACAGGGCTATACTGGAAAGCTCTGCACCTCCACCCCGAATTGTTTCTCTTTTaGATCAGCAGCTCTCAGTTT +
Preference number: 4 (lower is better)
Translates to: FNIPTKTGLYWKALHLHPELFLF*ISSSQF
Trigger: AAACTGAGAGCTGCTGATGCAAAAGAGAAACAATTC...GGGGTGGAGGTGCAGAGCTTTCCAGTATAGCCCTGTTTTTGTAGGAATATTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000438237.6
CDS-3UTR GCA 90 bp GTATATAATTTCTCTCTCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGACAAGGTTCTTCTGCTaGCCTTCCACCTGGTTCATC +
Preference number: 4 (lower is better)
Translates to: VYNFSLSHHFLDANTRSQTRFFC*PSTWFI
Trigger: GATGAACCAGGTGGAAGGGCAGCAGAAGAACCTTGT...CTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGAGAGAGAAATTATATAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR GCA 90 bp TCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGTGAATGCCAACAAAACGTGCGCCATGAAATCTaGATACATCTCCAGCAAAGA +
Preference number: 4 (lower is better)
Translates to: SLIISWMLIQGLSECQQNVRHEI*IHLQQR
Trigger: TCTTTGCTGGAGATGTATGCAGATTTCATGGCGCAC...GTTTTGTTGGCATTCACTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR GCA 90 bp GTATATAATTTCTCTCTCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGAGCAGTAGGTCTGGGTaGGCCATGAAATCTGCATAC +
Preference number: 4 (lower is better)
Translates to: VYNFSLSHHFLDANTRSQSSRSG*AMKSAY
Trigger: GTATGCAGATTTCATGGCGCACCCAGACCTACTGCT...CTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGAGAGAGAAATTATATAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR GCA 90 bp GTTAAGACAATGCTACTCAAAGGGATCTACAGATTCAATGCAATCCCTATCAAAGTTGTGCTTCACTTCTaGGGTAACCCTGTGGACTTT +
Preference number: 4 (lower is better)
Translates to: VKTMLLKGIYRFNAIPIKVVLHF*GNPVDF
Trigger: AAAGTCCACAGGGTTACCGCAGAAGTGAAGCACAAC...TTTGATAGGGATTGCATTGAATCTGTAGATCCCTTTGAGTAGCATTGTCTTAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR GCA 90 bp TTACCCACTTTAACCTTGGTGAGTGCAGTATTTAAATGTGTAATCATACTCAGAGTGTTGGTTGGGTTGTaGTTCACTTCTGCGGTAACC +
Preference number: 4 (lower is better)
Translates to: LPTLTLVSAVFKCVIILRVLVGL*FTSAVT
Trigger: GGTTACCGCAGAAGTGAAGCACAACCCAACCAACAC...TCTGAGTATGATTACACATTTAAATACTGCACTCACCAAGGTTAAAGTGGGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR GCA 90 bp GTATATAATTTCTCTCTCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGTATACTGGAAAGCTCTaGACCTCCACCCCATCAGTG +
Preference number: 4 (lower is better)
Translates to: VYNFSLSHHFLDANTRSQYTGKL*TSTPSV
Trigger: CACTGATGGGGTGGAGGTGCAGAGCTTTCCAGTATA...CTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGAGAGAGAAATTATATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR GCA 90 bp TTACCCACTTTAACCTTGGTGAGTGCAGTATTTAAATGTGTAATCATACTCAGAGTGTGTACACACACGTaGCCCGAATGGCTCTTGAAT +
Preference number: 4 (lower is better)
Translates to: LPTLTLVSAVFKCVIILRVCTHT*PEWLLN
Trigger: ATTCAAGAGCCATTCGGGGCACGTGTGTGTACACAC...TCTGAGTATGATTACACATTTAAATACTGCACTCACCAAGGTTAAAGTGGGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR GCA 90 bp ATTTCTCTCTCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGTGAATGCTTGAGGCTGTGGTTGTaGATGTTTTCATGTGCATGC +
Preference number: 4 (lower is better)
Translates to: ISLSLIISWMLIQGLSECLRLWL*MFSCAC
Trigger: GCATGCACATGAAAACATGCACAACCACAGCCTCAA...GCATTCACTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGAGAGAGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR GCA 90 bp ACTGAAACCATGGAATATTTATGCAGGCGTTATGTATGTTTTAGTCACAGTGCTAGTGCCCTGCCCACTTaGCCAGATATTATTTCTAGC +
Preference number: 4 (lower is better)
Translates to: TETMEYLCRRYVCFSHSASALPT*PDIISS
Trigger: GCTAGAAATAATATCTGGGCAAGTGGGCAGGGCACT...AGCACTGTGACTAAAACATACATAACGCCTGCATAAATATTCCATGGTTTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR GCA 90 bp AAATCTTTAACAGCTTCCTGCCAACCCCCATCCAGCAGGAAATACTTGCTTATCAACTGGATATCCACATaGAAAAGAATGAAGTTGGAC +
Preference number: 4 (lower is better)
Translates to: KSLTASCQPPSSRKYLLINWIST*KRMKLD
Trigger: GTCCAACTTCATTCTTTTGCATGTGGATATCCAGTT...GATAAGCAAGTATTTCCTGCTGGATGGGGGTTGGCAGGAAGCTGTTAAAGATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR CCA 90 bp ATACTCTACTACTTTAATATTCCTACAAAAACAGGGCTATACTGGAAAGCTCTGTTGCCCAGGTTATGTTaGCACTGGCTGATGGCAAAG +
Preference number: 4 (lower is better)
Translates to: ILYYFNIPTKTGLYWKALLPRLC*HWLMAK
Trigger: CTTTGCCATCAGCCAGTGCCAACATAACCTGGGCAA...CAGAGCTTTCCAGTATAGCCCTGTTTTTGTAGGAATATTAAAGTAGTAGAGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR CCA 90 bp ATAGTGGCTTTTAAGGTACTGGTAAACAGGTTTCTTTGCTTAAGCAGTGGCTACTTAGTTTGTAGCTTTTaGAAGGGTCATCGGCCATTG +
Preference number: 4 (lower is better)
Translates to: IVAFKVLVNRFLCLSSGYLVCSF*KGHRPL
Trigger: CAATGGCCGATGACCCTTCCAAAAGCTACAAACTAA...GTAGCCACTGCTTAAGCAAAGAAACCTGTTTACCAGTACCTTAAAAGCCACTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR CCA 90 bp ATTTCTCTCTCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGTGAATGCGGGCTTTACAAACAATaGTGTTGGTTGGGTTGTGCT +
Preference number: 4 (lower is better)
Translates to: ISLSLIISWMLIQGLSECGLYKQ*CWLGCA
Trigger: AGCACAACCCAACCAACACCATTGTTTGTAAAGCCC...GCATTCACTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGAGAGAGAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR CCA 90 bp CTGGTCTTAAGAAAGCAGACAAAAGGCACAAAATTAGTATTACTACAGAGAAGCCTTCTTGGGATACACTaGCAGTGTGGTTGTGTCGAT +
Preference number: 4 (lower is better)
Translates to: LVLRKQTKGTKLVLLQRSLLGIH*QCGCVD
Trigger: ATCGACACAACCACACTGCCAGTGTATCCCAAGAAG...GCTTCTCTGTAGTAATACTAATTTTGTGCCTTTTGTCTGCTTTCTTAAGACCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR CCA 90 bp ATGCTAATACAAGGTCTCAGTGAATGCCAACAAAACCCTGATACTCTACTACTTCTTGCTTATCTTTCTTaGGCGCGGACAGACAAAACA +
Preference number: 4 (lower is better)
Translates to: MLIQGLSECQQNPDTLLLLAYLS*ARTDKT
Trigger: TGTTTTGTCTGTCCGCGCCCAAGAAAGATAAGCAAG...AAGTAGTAGAGTATCAGGGTTTTGTTGGCATTCACTGAGACCTTGTATTAGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR CCA 90 bp ACTGAAACCATGGAATATTTATGCAGGCGTTATGTATGTTTTAGTCACAGTGCTTGGAAAACTCCTTGGTaGGCCTTGGCTCTTAGTTGT +
Preference number: 4 (lower is better)
Translates to: TETMEYLCRRYVCFSHSAWKTPW*ALALSC
Trigger: ACAACTAAGAGCCAAGGCCCACCAAGGAGTTTTCCA...AGCACTGTGACTAAAACATACATAACGCCTGCATAAATATTCCATGGTTTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR CCA 90 bp TCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGTGAATGCCAACAAAACCTTTCTTGCAGAGTTTaGGTTAACCAGAGAGGTGCA +
Preference number: 4 (lower is better)
Translates to: SLIISWMLIQGLSECQQNLSCRV*VNQRGA
Trigger: TGCACCTCTCTGGTTAACCCAAACTCTGCAAGAAAG...GTTTTGTTGGCATTCACTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR CCA 90 bp ACGTATACGGTGTGTACACACACGTGCCCCGAATGGCTCTTGAATAAATTCATTAGTCTTTTCAACAAATaGTGTTGGGGAAACTGGATA +
Preference number: 4 (lower is better)
Translates to: TYTVCTHTCPEWLLNKFISLFNK*CWGNWI
Trigger: TATCCAGTTTCCCCAACACCATTTGTTGAAAAGACT...AATGAATTTATTCAAGAGCCATTCGGGGCACGTGTGTGTACACACCGTATACGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR CCA 90 bp ATTTCTCTCTCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGTGAATGCTGCTGCCCTTCCACCTaGTTCATCATCTTAGAATTC +
Preference number: 4 (lower is better)
Translates to: ISLSLIISWMLIQGLSECCCPST*FIILEF
Trigger: GAATTCTAAGATGATGAACCAGGTGGAAGGGCAGCA...GCATTCACTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGAGAGAGAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438237.6
CDS-3UTR TCA 90 bp ATACTCTACTACTTTAATATTCCTACAAAAACAGGGCTATACTGGAAAGCTCTGCCTCGTGAAAGGCTGTaGGATAATACTCAACGAAGC +
Preference number: 4 (lower is better)
Translates to: ILYYFNIPTKTGLYWKALPRERL*DNTQRS
Trigger: GCTTCGTTGAGTATTATCTCACAGCCTTTCACGAGG...CAGAGCTTTCCAGTATAGCCCTGTTTTTGTAGGAATATTAAAGTAGTAGAGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR TCA 90 bp ATACTCTACTACTTTAATATTCCTACAAAAACAGGGCTATACTGGAAAGCTCTGCTTTTGGTCCATACATaGGTGTTGACGCACAGTCTC +
Preference number: 4 (lower is better)
Translates to: ILYYFNIPTKTGLYWKALLLVHT*VLTHSL
Trigger: GAGACTGTGCGTCAACACTCATGTATGGACCAAAAG...CAGAGCTTTCCAGTATAGCCCTGTTTTTGTAGGAATATTAAAGTAGTAGAGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR TCA 90 bp TCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGTGAATGCCAACAAAACCTCCATTGTTGTAGGTaGACTCTAAAGTACCATTCC +
Preference number: 4 (lower is better)
Translates to: SLIISWMLIQGLSECQQNLHCCR*TLKYHS
Trigger: GGAATGGTACTTTAGAGTTCACCTACAACAATGGAG...GTTTTGTTGGCATTCACTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR TCA 90 bp CTGGTCTTAAGAAAGCAGACAAAAGGCACAAAATTAGTATTACTACAGAGAAGCGTGTGGTTGTGTCGATaGCTTTGGTTTCTCCATTGT +
Preference number: 4 (lower is better)
Translates to: LVLRKQTKGTKLVLLQRSVWLCR*LWFLHC
Trigger: ACAATGGAGAAACCAAAGTCATCGACACAACCACAC...GCTTCTCTGTAGTAATACTAATTTTGTGCCTTTTGTCTGCTTTCTTAAGACCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR TCA 90 bp CTGGTCTTAAGAAAGCAGACAAAAGGCACAAAATTAGTATTACTACAGAGAAGCGGAAGACTTGCCCAGTaGAAACTACAAAACATGCTG +
Preference number: 4 (lower is better)
Translates to: LVLRKQTKGTKLVLLQRSGRLAQ*KLQNML
Trigger: CAGCATGTTTTGTAGTTTTCACTGGGCAAGTCTTCC...GCTTCTCTGTAGTAATACTAATTTTGTGCCTTTTGTCTGCTTTCTTAAGACCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR GCA 90 bp ACTGAAACCATGGAATATTTATGCAGGCGTTATGTATGTTTTAGTCACAGTGCTGTCCCATTTTTCAGCTaGTCTGTGGAATGTGACTTG +
Preference number: 4 (lower is better)
Translates to: TETMEYLCRRYVCFSHSAVPFFS*SVECDL
Trigger: CAAGTCACATTCCACAGAGCAGCTGAAAAATGGGAC...AGCACTGTGACTAAAACATACATAACGCCTGCATAAATATTCCATGGTTTCAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR GCA 90 bp ATACTCTACTACTTTAATATTCCTACAAAAACAGGGCTATACTGGAAAGCTCTGGTTGTGCTTCACTTCTaGGGTAACCCTGTGGACTTT +
Preference number: 4 (lower is better)
Translates to: ILYYFNIPTKTGLYWKALVVLHF*GNPVDF
Trigger: AAAGTCCACAGGGTTACCGCAGAAGTGAAGCACAAC...CAGAGCTTTCCAGTATAGCCCTGTTTTTGTAGGAATATTAAAGTAGTAGAGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR GCA 90 bp ATGCTAATACAAGGTCTCAGTGAATGCCAACAAAACCCTGATACTCTACTACTTCAAGGTCTCAGTGAATaGCAACAAAACCCTGATACT +
Preference number: 4 (lower is better)
Translates to: MLIQGLSECQQNPDTLLLQGLSE*QQNPDT
Trigger: AGTATCAGGGTTTTGTTGGCATTCACTGAGACCTTG...AAGTAGTAGAGTATCAGGGTTTTGTTGGCATTCACTGAGACCTTGTATTAGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR GCA 90 bp GTTAAGACAATGCTACTCAAAGGGATCTACAGATTCAATGCAATCCCTATCAAAATTCTGTTCTCAGAGTaGTTCCCAATCCCTCCACAA +
Preference number: 4 (lower is better)
Translates to: VKTMLLKGIYRFNAIPIKILFSE*FPIPPQ
Trigger: TTGTGGAGGGATTGGGAAGCACTCTGAGAACAGAAT...TTTGATAGGGATTGCATTGAATCTGTAGATCCCTTTGAGTAGCATTGTCTTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR GCA 90 bp TCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGTGAATGCCAACAAAACAGTTACCTACTATGTTaGCCTAACTCACTTCTCAGC +
Preference number: 4 (lower is better)
Translates to: SLIISWMLIQGLSECQQNSYLLC*PNSLLS
Trigger: GCTGAGAAGTGAGTTAGGGCAACATAGTAGGTAACT...GTTTTGTTGGCATTCACTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR GCA 90 bp ATGCTAATACAAGGTCTCAGTGAATGCCAACAAAACCCTGATACTCTACTACTTAAATTGGATCCCTTGTaGATTGCTAGTGGCATTGCA +
Preference number: 4 (lower is better)
Translates to: MLIQGLSECQQNPDTLLLKLDPL*IASGIA
Trigger: TGCAATGCCACTAGCAATGCACAAGGGATCCAATTT...AAGTAGTAGAGTATCAGGGTTTTGTTGGCATTCACTGAGACCTTGTATTAGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR CCA 90 bp GTATATAATTTCTCTCTCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGACTCCTCGAGGCTTCTaGTGTTTGCTTTGCTCATTC +
Preference number: 4 (lower is better)
Translates to: VYNFSLSHHFLDANTRSQTPRGF*CLLCSF
Trigger: GAATGAGCAAAGCAAACACCAGAAGCCTCGAGGAGT...CTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGAGAGAGAAATTATATAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000438237.6
CDS-3UTR CCA 90 bp CTGGTCTTAAGAAAGCAGACAAAAGGCACAAAATTAGTATTACTACAGAGAAGCGGGCTTTACAAACAATaGTGTTGGTTGGGTTGTGCT +
Preference number: 4 (lower is better)
Translates to: LVLRKQTKGTKLVLLQRSGLYKQ*CWLGCA
Trigger: AGCACAACCCAACCAACACCATTGTTTGTAAAGCCC...GCTTCTCTGTAGTAATACTAATTTTGTGCCTTTTGTCTGCTTTCTTAAGACCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR CCA 90 bp ATACTCTACTACTTTAATATTCCTACAAAAACAGGGCTATACTGGAAAGCTCTGCAGCCATCGCCCTCCTaGATAAAATATTTGGGCTTC +
Preference number: 4 (lower is better)
Translates to: ILYYFNIPTKTGLYWKALQPSPS*IKYLGF
Trigger: GAAGCCCAAATATTTTATCCAGGAGGGCGATGGCTG...CAGAGCTTTCCAGTATAGCCCTGTTTTTGTAGGAATATTAAAGTAGTAGAGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000438237.6
CDS-3UTR CCA 90 bp GTATATAATTTCTCTCTCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGCAGCCATCGCCCTCCTaGATAAAATATTTGGGCTTC +
Preference number: 4 (lower is better)
Translates to: VYNFSLSHHFLDANTRSQQPSPS*IKYLGF
Trigger: GAAGCCCAAATATTTTATCCAGGAGGGCGATGGCTG...CTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGAGAGAGAAATTATATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000438237.6
CDS-3UTR CCA 90 bp GTATATAATTTCTCTCTCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGAAAACAGGGCTATACTaGAAAGCTCTGCACCTCCAC +
Preference number: 4 (lower is better)
Translates to: VYNFSLSHHFLDANTRSQKTGLY*KALHLH
Trigger: GTGGAGGTGCAGAGCTTTCCAGTATAGCCCTGTTTT...CTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGAGAGAGAAATTATATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR CCA 90 bp TTACCCACTTTAACCTTGGTGAGTGCAGTATTTAAATGTGTAATCATACTCAGATCCTCTAGCAGAGTGTaGGGGTGCACTTTTCATAGT +
Preference number: 4 (lower is better)
Translates to: LPTLTLVSAVFKCVIILRSSSRV*GCTFHS
Trigger: ACTATGAAAAGTGCACCCCCACACTCTGCTAGAGGA...TCTGAGTATGATTACACATTTAAATACTGCACTCACCAAGGTTAAAGTGGGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR CCA 90 bp GTATATAATTTCTCTCTCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGTCCTCTAGCAGAGTGTaGGGGTGCACTTTTCATAGT +
Preference number: 4 (lower is better)
Translates to: VYNFSLSHHFLDANTRSQSSSRV*GCTFHS
Trigger: ACTATGAAAAGTGCACCCCCACACTCTGCTAGAGGA...CTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGAGAGAGAAATTATATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR CCA 90 bp ATACTCTACTACTTTAATATTCCTACAAAAACAGGGCTATACTGGAAAGCTCTGTCCTCTAGCAGAGTGTaGGGGTGCACTTTTCATAGT +
Preference number: 4 (lower is better)
Translates to: ILYYFNIPTKTGLYWKALSSSRV*GCTFHS
Trigger: ACTATGAAAAGTGCACCCCCACACTCTGCTAGAGGA...CAGAGCTTTCCAGTATAGCCCTGTTTTTGTAGGAATATTAAAGTAGTAGAGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR CCA 90 bp CTGGTCTTAAGAAAGCAGACAAAAGGCACAAAATTAGTATTACTACAGAGAAGCCTTTCTTGCAGAGTTTaGGTTAACCAGAGAGGTGCA +
Preference number: 4 (lower is better)
Translates to: LVLRKQTKGTKLVLLQRSLSCRV*VNQRGA
Trigger: TGCACCTCTCTGGTTAACCCAAACTCTGCAAGAAAG...GCTTCTCTGTAGTAATACTAATTTTGTGCCTTTTGTCTGCTTTCTTAAGACCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR TCA 90 bp GTATATAATTTCTCTCTCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGAGAATTATACTACGCTaGTCCTCCATGACGCCCAAT +
Preference number: 4 (lower is better)
Translates to: VYNFSLSHHFLDANTRSQRIILR*SSMTPN
Trigger: ATTGGGCGTCATGGAGGATCAGCGTAGTATAATTCT...CTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGAGAGAGAAATTATATAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR TCA 90 bp TCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGTGAATGCCAACAAAACCAGGAGTTGACTAAGTaGGAATATCTTTGTGAGTGT +
Preference number: 4 (lower is better)
Translates to: SLIISWMLIQGLSECQQNQELTK*EYLCEC
Trigger: ACACTCACAAAGATATTCTCACTTAGTCAACTCCTG...GTTTTGTTGGCATTCACTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR GCA 90 bp GTATATAATTTCTCTCTCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGCAAAATACTGCAGGATaGCAGCCTCGAAATCCAGTA +
Preference number: 4 (lower is better)
Translates to: VYNFSLSHHFLDANTRSQQNTAG*QPRNPV
Trigger: TACTGGATTTCGAGGCTGGCATCCTGCAGTATTTTG...CTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGAGAGAGAAATTATATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000438237.6
CDS-3UTR GCA 90 bp TCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGTGAATGCCAACAAAACGAGGCTTCTGGTGTTTaGTTTGCTCATTCACAAAAT +
Preference number: 4 (lower is better)
Translates to: SLIISWMLIQGLSECQQNEASGV*FAHSQN
Trigger: ATTTTGTGAATGAGCAAAGCAAACACCAGAAGCCTC...GTTTTGTTGGCATTCACTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000438237.6
CDS-3UTR GCA 90 bp ATTTCTCTCTCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGTGAATGCGAGGCTTCTGGTGTTTaGTTTGCTCATTCACAAAAT +
Preference number: 4 (lower is better)
Translates to: ISLSLIISWMLIQGLSECEASGV*FAHSQN
Trigger: ATTTTGTGAATGAGCAAAGCAAACACCAGAAGCCTC...GCATTCACTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGAGAGAGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000438237.6
CDS-3UTR GCA 90 bp ATACTCTACTACTTTAATATTCCTACAAAAACAGGGCTATACTGGAAAGCTCTGGTCCCATTTTTCAGCTaGTCTGTGGAATGTGACTTG +
Preference number: 4 (lower is better)
Translates to: ILYYFNIPTKTGLYWKALVPFFS*SVECDL
Trigger: CAAGTCACATTCCACAGAGCAGCTGAAAAATGGGAC...CAGAGCTTTCCAGTATAGCCCTGTTTTTGTAGGAATATTAAAGTAGTAGAGTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR GCA 90 bp TTACCCACTTTAACCTTGGTGAGTGCAGTATTTAAATGTGTAATCATACTCAGAGTCACAGTGCTTTCTTaGAGAGTTTGGGTTAACCAG +
Preference number: 4 (lower is better)
Translates to: LPTLTLVSAVFKCVIILRVTVLS*RVWVNQ
Trigger: CTGGTTAACCCAAACTCTGCAAGAAAGCACTGTGAC...TCTGAGTATGATTACACATTTAAATACTGCACTCACCAAGGTTAAAGTGGGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR CCA 90 bp GTATATAATTTCTCTCTCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGTGGGAAGCACCACCTTaGTCAAATCCATTCCAAGTT +
Preference number: 4 (lower is better)
Translates to: VYNFSLSHHFLDANTRSQWEAPP*SNPFQV
Trigger: AACTTGGAATGGATTTGACCAAGGTGGTGCTTCCCA...CTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGAGAGAGAAATTATATAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR CCA 90 bp TCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGTGAATGCCAACAAAACTACAAACAATGGTGTTaGTTGGGTTGTGCTTCACTT +
Preference number: 4 (lower is better)
Translates to: SLIISWMLIQGLSECQQNYKQWC*LGCASL
Trigger: AAGTGAAGCACAACCCAACCAACACCATTGTTTGTA...GTTTTGTTGGCATTCACTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR CCA 90 bp ATTTCTCTCTCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGTGAATGCTACAAACAATGGTGTTaGTTGGGTTGTGCTTCACTT +
Preference number: 4 (lower is better)
Translates to: ISLSLIISWMLIQGLSECYKQWC*LGCASL
Trigger: AAGTGAAGCACAACCCAACCAACACCATTGTTTGTA...GCATTCACTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGAGAGAGAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR CCA 90 bp TCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGTGAATGCCAACAAAACACAAGATTGAGGCTGTaGTTGTGCATGTTTTCATGT +
Preference number: 4 (lower is better)
Translates to: SLIISWMLIQGLSECQQNTRLRL*LCMFSC
Trigger: ACATGAAAACATGCACAACCACAGCCTCAATCTTGT...GTTTTGTTGGCATTCACTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR CCA 90 bp GTTAAGACAATGCTACTCAAAGGGATCTACAGATTCAATGCAATCCCTATCAAAAGGATGTGGAGAAATTaGATCCCTTGTGCATTGCTA +
Preference number: 4 (lower is better)
Translates to: VKTMLLKGIYRFNAIPIKRMWRN*IPCALL
Trigger: TAGCAATGCACAAGGGATCCAATTTCTCCACATCCT...TTTGATAGGGATTGCATTGAATCTGTAGATCCCTTTGAGTAGCATTGTCTTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR TCA 90 bp GTATATAATTTCTCTCTCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGCTCCATTGTTGTAGGTaGACTCTAAAGTACCATTCC +
Preference number: 4 (lower is better)
Translates to: VYNFSLSHHFLDANTRSQLHCCR*TLKYHS
Trigger: GGAATGGTACTTTAGAGTTCACCTACAACAATGGAG...CTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGAGAGAGAAATTATATAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR GCA 90 bp ATACTCTACTACTTTAATATTCCTACAAAAACAGGGCTATACTGGAAAGCTCTGCAAGGTCTCAGTGAATaGCAACAAAACCCTGATACT +
Preference number: 4 (lower is better)
Translates to: ILYYFNIPTKTGLYWKALQGLSE*QQNPDT
Trigger: AGTATCAGGGTTTTGTTGGCATTCACTGAGACCTTG...CAGAGCTTTCCAGTATAGCCCTGTTTTTGTAGGAATATTAAAGTAGTAGAGTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR GCA 90 bp ATACTCTACTACTTTAATATTCCTACAAAAACAGGGCTATACTGGAAAGCTCTGCTTGATTCACCCAGATaGTTTAAAGACTGTGGACCT +
Preference number: 4 (lower is better)
Translates to: ILYYFNIPTKTGLYWKALLDSPR*FKDCGP
Trigger: AGGTCCACAGTCTTTAAAGCATCTGGGTGAATCAAG...CAGAGCTTTCCAGTATAGCCCTGTTTTTGTAGGAATATTAAAGTAGTAGAGTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR CCA 90 bp GTATATAATTTCTCTCTCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGTTAGTTTGTAGCTTTTaGAAGGGTCATCGGCCATTG +
Preference number: 4 (lower is better)
Translates to: VYNFSLSHHFLDANTRSQLVCSF*KGHRPL
Trigger: CAATGGCCGATGACCCTTCCAAAAGCTACAAACTAA...CTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGAGAGAGAAATTATATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR CCA 90 bp ATGCTAATACAAGGTCTCAGTGAATGCCAACAAAACCCTGATACTCTACTACTTTCTCTCATCATTTCTTaGATGCTAATACAAGGTCTC +
Preference number: 4 (lower is better)
Translates to: MLIQGLSECQQNPDTLLLSLIIS*MLIQGL
Trigger: GAGACCTTGTATTAGCATCCAAGAAATGATGAGAGA...AAGTAGTAGAGTATCAGGGTTTTGTTGGCATTCACTGAGACCTTGTATTAGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR GCA 90 bp ACTGAAACCATGGAATATTTATGCAGGCGTTATGTATGTTTTAGTCACAGTGCTTTCTGGTGTTTGCTTTaGTCATTCACAAAATACTGC +
Preference number: 4 (lower is better)
Translates to: TETMEYLCRRYVCFSHSAFWCLL*SFTKYC
Trigger: GCAGTATTTTGTGAATGAGCAAAGCAAACACCAGAA...AGCACTGTGACTAAAACATACATAACGCCTGCATAAATATTCCATGGTTTCAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396556.7
CDS-3UTR CCA 90 bp ATACTCTACTACTTTAATATTCCTACAAAAACAGGGCTATACTGGAAAGCTCTGTCTCTCATCATTTCTTaGATGCTAATACAAGGTCTC +
Preference number: 4 (lower is better)
Translates to: ILYYFNIPTKTGLYWKALSLIIS*MLIQGL
Trigger: GAGACCTTGTATTAGCATCCAAGAAATGATGAGAGA...CAGAGCTTTCCAGTATAGCCCTGTTTTTGTAGGAATATTAAAGTAGTAGAGTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR CCA 90 bp ATACTCTACTACTTTAATATTCCTACAAAAACAGGGCTATACTGGAAAGCTCTGGTTTTACTTCCCAGATaGTTTATGCTTTGTAGTCAG +
Preference number: 4 (lower is better)
Translates to: ILYYFNIPTKTGLYWKALVLLPR*FMLCSQ
Trigger: CTGACTACAAAGCATAAACCATCTGGGAAGTAAAAC...CAGAGCTTTCCAGTATAGCCCTGTTTTTGTAGGAATATTAAAGTAGTAGAGTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS GCA 90 bp GGCTGCTGCTGCGGCTGCTGCTGTTGCTACCCCCGCCGCCGTCTGTaGCCTGGACTGCCCTCTCCATGGTCCGTGGGCGCCCGGGACGCG +
Preference number: 5 (lower is better)
Translates to: GCCCGCCCCYPRRRL*PGLPSPWSVGARDA
Trigger: CGCGTCCCGGGCGCCCACGGACCATGGAGAGGGCAGTCCAGGGCACAGACGGCGGCGGGGGTAGCAACAGCAGCAGCCGCAGCAGCAGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000438237.6
ENST00000452791.1
CDS TCA 90 bp CGAAGTACCTGTTCTGCCAGCCCTGGAGGAGGTTGGTGTATTTGCTaGGCACGCCCTCGAGCGCCGGCTCCCTCCTGCGGCCGCCTCCCC +
Preference number: 5 (lower is better)
Translates to: RSTCSASPGGGWCIC*ARPRAPAPSCGRLP
Trigger: GGGGAGGCGGCCGCAGGAGGGAGCCGGCGCTCGAGGGCGTGCTCAGCAAATACACCAACCTCCTCCAGGGCTGGCAGAACAGGTACTTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000438237.6
CDS TCA 90 bp ATCAGCAGCTGTTCTGCCAGCCCTGGAGGAGGTTGGTGTATTTGCTaGGCACGCCCTCGAGCGCCGGCTCCCTCCTGCGGCCGCCTCCCC +
Preference number: 5 (lower is better)
Translates to: ISSCSASPGGGWCIC*ARPRAPAPSCGRLP
Trigger: GGGGAGGCGGCCGCAGGAGGGAGCCGGCGCTCGAGGGCGTGCTCAGCAAATACACCAACCTCCTCCAGGGCTGGCAGAACAGCTGCTGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452791.1
CDS TCA 90 bp GAGGAAACCGGCAAGAGCCTCTCCCCGCATCTGCCCACAGCGGGATaGGGGAGGAGGCGCCGCTGTCGGTCCACACCATGGCAGAGTGGC +
Preference number: 5 (lower is better)
Translates to: EETGKSLSPHLPTAG*GRRRRCRSTPWQSG
Trigger: GCCACTCTGCCATGGTGTGGACCGACAGCGGCGCCTCCTCCCTCATCCCGCTGTGGGCAGATGCGGGGAGAGGCTCTTGCCGGTTTCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673388.1
CDS GCA 90 bp CTCCACCCGTTGCTTCTCCTCCAGGTGCCGCTTCTGCTCGGTGGCTaGGTCAATGTCCCCCAGCCGCAGGTATCGGGTCACCTCCCGCCA +
Preference number: 5 (lower is better)
Translates to: LHPLLLLQVPLLLGG*VNVPQPQVSGHLPP
Trigger: TGGCGGGAGGTGACCCGATACCTGCGGCTGGGGGACATTGACGCAGCCACCGAGCAGAAGCGGCACCTGGAGGAGAAGCAACGGGTGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
ENST00000469557.1
CDS GCA 90 bp CGCTTCCGTTCCTCCACCCGTTGCTTCTCCTCCAGGTGCCGCTTCTaGTCGGTGGCTGCGTCAATGTCCCCCAGCCGCAGGTATCGGGTC +
Preference number: 5 (lower is better)
Translates to: RFRSSTRCFSSRCRF*SVAASMSPSRRYRV
Trigger: GACCCGATACCTGCGGCTGGGGGACATTGACGCAGCCACCGAGCAGAAGCGGCACCTGGAGGAGAAGCAACGGGTGGAGGAACGGAAGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
ENST00000469557.1
CDS GCA 90 bp AGGTTCTCGCGCTTCCGTTCCTCCACCCGTTGCTTCTCCTCCAGGTaGCGCTTCTGCTCGGTGGCTGCGTCAATGTCCCCCAGCCGCAGG +
Preference number: 5 (lower is better)
Translates to: RFSRFRSSTRCFSSR*RFCSVAASMSPSRR
Trigger: CCTGCGGCTGGGGGACATTGACGCAGCCACCGAGCAGAAGCGGCACCTGGAGGAGAAGCAACGGGTGGAGGAACGGAAGCGCGAGAACCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
ENST00000469557.1
CDS GCA 90 bp AGGAAACAATCAGCCAGGCCAGCTGGCTGCAAGCTAACGGAACTCTaGCAGGAGCAGCCAGAGCAGCGAGGGGCCGCCAGGCAAGCCCCC +
Preference number: 5 (lower is better)
Translates to: RKQSARPAGCKLTEL*QEQPEQRGAARQAP
Trigger: GGGGGCTTGCCTGGCGGCCCCTCGCTGCTCTGGCTGCTCCTGGCAGAGTTCCGTTAGCTTGCAGCCAGCTGGCCTGGCTGATTGTTTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469557.1
CDS CCA 90 bp CGGCAGCCTGAACCTGGGCTGCAGCTCAATGCCCAAGAGGAGTGTTaGCCATGGCCCCACAGATCCCGGCCTGGCTCAGGAGCATGCAGG +
Preference number: 5 (lower is better)
Translates to: RQPEPGLQLNAQEEC*PWPHRSRPGSGACR
Trigger: CCTGCATGCTCCTGAGCCAGGCCGGGATCTGTGGGGCCATGGCCAACACTCCTCTTGGGCATTGAGCTGCAGCCCAGGTTCAGGCTGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467647.1
CDS CCA 90 bp TGTCCCCCAGCCGCAGGTATCGGGTCACCTCCCGCCAGAGGTTCCTaGGGATGCGTGGAGGAGAGGAAACAATCAGCCAGGCCAGCTGGC +
Preference number: 5 (lower is better)
Translates to: CPPAAGIGSPPARGS*GCVEERKQSARPAG
Trigger: GCCAGCTGGCCTGGCTGATTGTTTCCTCTCCTCCACGCATCCCCAGGAACCTCTGGCGGGAGGTGACCCGATACCTGCGGCTGGGGGACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469557.1
CDS GCA 90 bp GAGGCTCCTGGCTTCTGGCTGGGCTGGCCCGCCTGGTGCACACTCTaGTGTAACAAGTTGAGGCACTCCCCAAGGCAGCTGAGGGTGGCA +
Preference number: 5 (lower is better)
Translates to: EAPGFWLGWPAWCTL*CNKLRHSPRQLRVA
Trigger: TGCCACCCTCAGCTGCCTTGGGGAGTGCCTCAACTTGTTACAGCAGAGTGTGCACCAGGCGGGCCAGCCCAGCCAGAAGCCAGGAGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396556.7
ENST00000428241.1
ENST00000429492.6
ENST00000438237.6
ENST00000467647.1
ENST00000673388.1
CDS GCA 90 bp CCAGCCGCAGGTATCGGGTCACCTCCCGCCAGAGGTTCCTGGGGATaGGTGGAGGAGAGGAAACAATCAGCCAGGCCAGCTGGCTGCAAG +
Preference number: 5 (lower is better)
Translates to: PAAGIGSPPARGSWG*VEERKQSARPAGCK
Trigger: CTTGCAGCCAGCTGGCCTGGCTGATTGTTTCCTCTCCTCCACGCATCCCCAGGAACCTCTGGCGGGAGGTGACCCGATACCTGCGGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469557.1
CDS CCA 90 bp CCTGAACCTGGGCTGCAGCTCAATGCCCAAGAGGAGTGTTGGCCATaGCCCCACAGATCCCGGCCTGGCTCAGGAGCATGCAGGAGTCGA +
Preference number: 5 (lower is better)
Translates to: PEPGLQLNAQEECWP*PHRSRPGSGACRSR
Trigger: TCGACTCCTGCATGCTCCTGAGCCAGGCCGGGATCTGTGGGGCCATGGCCAACACTCCTCTTGGGCATTGAGCTGCAGCCCAGGTTCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467647.1
CDS GCA 90 bp TTCCATGGTGTGCGGAGGTTCTCGCGCTTCCGTTCCTCCACCCGTTaGTTCTCCTCCAGGTGCCGCTTCTGCTCGGTGGCTGCGTCAATG +
Preference number: 5 (lower is better)
Translates to: FHGVRRFSRFRSSTR*FSSRCRFCSVAASM
Trigger: CATTGACGCAGCCACCGAGCAGAAGCGGCACCTGGAGGAGAAGCAACGGGTGGAGGAACGGAAGCGCGAGAACCTCCGCACACCATGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
ENST00000469557.1
CDS GCA 90 bp TGGGGATGCGTGGAGGAGAGGAAACAATCAGCCAGGCCAGCTGGCTaGAAGCTAACGGAACTCTGCCAGGAGCAGCCAGAGCAGCGAGGG +
Preference number: 5 (lower is better)
Translates to: WGCVEERKQSARPAG*KLTELCQEQPEQRG
Trigger: CCCTCGCTGCTCTGGCTGCTCCTGGCAGAGTTCCGTTAGCTTGCAGCCAGCTGGCCTGGCTGATTGTTTCCTCTCCTCCACGCATCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469557.1
CDS GCA 90 bp TTCGTGAAGCTGGCCGGAATACTGACTCTTGGCTCTTCGGGCGGCTaGAGGCGACTTGTGATGCGTGATTGTGACAACACCGGGGGCCCC +
Preference number: 5 (lower is better)
Translates to: FVKLAGILTLGSSGG*RRLVMRDCDNTGGP
Trigger: GGGGCCCCCGGTGTTGTCACAATCACGCATCACAAGTCGCCTGCAGCCGCCCGAAGAGCCAAGAGTCAGTATTCCGGCCAGCTTCACGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000396556.7
ENST00000466604.5
ENST00000467647.1
ENST00000467955.5
ENST00000485205.5
CDS GCA 90 bp GCTGGTACCCCTTGGCCCTGCTGCAGGGCGGCTGTTGAAGGCTCCTaGACACGTACTATCCTCTACATGGAGCCACTTCCAAAGCCAGGC +
Preference number: 5 (lower is better)
Translates to: AGTPWPCCRAAVEGS*TRTILYMEPLPKPG
Trigger: GCCTGGCTTTGGAAGTGGCTCCATGTAGAGGATAGTACGTGTGCAGGAGCCTTCAACAGCCGCCCTGCAGCAGGGCCAAGGGGTACCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490009.1
CDS CCA 90 bp AGGATGTTTTCCGAGGCTCCTGGCTTCTGGCTGGGCTGGCCCGCCTaGTGCACACTCTGCTGTAACAAGTTGAGGCACTCCCCAAGGCAG +
Preference number: 5 (lower is better)
Translates to: RMFSEAPGFWLGWPA*CTLCCNKLRHSPRQ
Trigger: CTGCCTTGGGGAGTGCCTCAACTTGTTACAGCAGAGTGTGCACCAGGCGGGCCAGCCCAGCCAGAAGCCAGGAGCCTCGGAAAACATCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000396556.7
ENST00000428241.1
ENST00000429492.6
ENST00000438237.6
ENST00000467647.1
ENST00000673388.1
CDS CCA 90 bp TGCCATCCCAGGATGTTTTCCGAGGCTCCTGGCTTCTGGCTGGGCTaGCCCGCCTGGTGCACACTCTGCTGTAACAAGTTGAGGCACTCC +
Preference number: 5 (lower is better)
Translates to: CHPRMFSEAPGFWLG*PAWCTLCCNKLRHS
Trigger: GGAGTGCCTCAACTTGTTACAGCAGAGTGTGCACCAGGCGGGCCAGCCCAGCCAGAAGCCAGGAGCCTCGGAAAACATCCTGGGATGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396556.7
ENST00000428241.1
ENST00000429492.6
ENST00000438237.6
ENST00000467647.1
ENST00000673388.1
CDS CCA 90 bp TTCCTGGGGATGCGTGGAGGAGAGGAAACAATCAGCCAGGCCAGCTaGCTGCAAGCTAACGGAACTCTGCCAGGAGCAGCCAGAGCAGCG +
Preference number: 5 (lower is better)
Translates to: FLGMRGGEETISQAS*LQANGTLPGAARAA
Trigger: CGCTGCTCTGGCTGCTCCTGGCAGAGTTCCGTTAGCTTGCAGCCAGCTGGCCTGGCTGATTGTTTCCTCTCCTCCACGCATCCCCAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469557.1
CDS TCA 90 bp GCAAGGACTGCTCTCCTGACGAGGCAGTGCATATCCTCGGCAGCCTaGACCTGGGCTGCAGCTCAATGCCCAAGAGGAGTGTTGGCCATG +
Preference number: 5 (lower is better)
Translates to: ARTALLTRQCISSAA*TWAAAQCPRGVLAM
Trigger: CATGGCCAACACTCCTCTTGGGCATTGAGCTGCAGCCCAGGTTCAGGCTGCCGAGGATATGCACTGCCTCGTCAGGAGAGCAGTCCTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467647.1
CDS TCA 90 bp TGTTGGAGCCTGGCTGATCACCAGGATCTGCAAGGACTGCTCTCCTaGCGAGGCAGTGCATATCCTCGGCAGCCTGAACCTGGGCTGCAG +
Preference number: 5 (lower is better)
Translates to: CWSLADHQDLQGLLS*RGSAYPRQPEPGLQ
Trigger: CTGCAGCCCAGGTTCAGGCTGCCGAGGATATGCACTGCCTCGTCAGGAGAGCAGTCCTTGCAGATCCTGGTGATCAGCCAGGCTCCAACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467647.1
CDS GCA 90 bp TCCAAGGCAGTGAGGGGGCCGGACCCTGGCAGGGACTCAATGGCGTaGACAAGGTTCTTCTGCTGCCCTTCCACCTGGTTCATCATCTCT +
Preference number: 5 (lower is better)
Translates to: SKAVRGPDPGRDSMA*TRFFCCPSTWFIIS
Trigger: AGAGATGATGAACCAGGTGGAAGGGCAGCAGAAGAACCTTGTGCACGCCATTGAGTCCCTGCCAGGGTCCGGCCCCCTCACTGCCTTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000467647.1
ENST00000467955.5
ENST00000485205.5
CDS GCA 90 bp GAGTGTTGGCCATGGCCCCACAGATCCCGGCCTGGCTCAGGAGCATaGAGGAGTCGAGCATGTGAGGCAAGAGCTTGTATCAGCAGGAAC +
Preference number: 5 (lower is better)
Translates to: ECWPWPHRSRPGSGA*RSRACEARACISRN
Trigger: GTTCCTGCTGATACAAGCTCTTGCCTCACATGCTCGACTCCTGCATGCTCCTGAGCCAGGCCGGGATCTGTGGGGCCATGGCCAACACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467647.1
CDS GCA 90 bp TCTCCTGACGAGGCAGTGCATATCCTCGGCAGCCTGAACCTGGGCTaGAGCTCAATGCCCAAGAGGAGTGTTGGCCATGGCCCCACAGAT +
Preference number: 5 (lower is better)
Translates to: SPDEAVHILGSLNLG*SSMPKRSVGHGPTD
Trigger: ATCTGTGGGGCCATGGCCAACACTCCTCTTGGGCATTGAGCTGCAGCCCAGGTTCAGGCTGCCGAGGATATGCACTGCCTCGTCAGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467647.1
CDS CCA 90 bp GTGGACACATGCCTTCAGCTGGTGTCTGGTATAGCTGGTACCCCTTaGCCCTGCTGCAGGGCGGCTGTTGAAGGCTCCTGCACACGTACT +
Preference number: 5 (lower is better)
Translates to: VDTCLQLVSGIAGTP*PCCRAAVEGSCTRT
Trigger: AGTACGTGTGCAGGAGCCTTCAACAGCCGCCCTGCAGCAGGGCCAAGGGGTACCAGCTATACCAGACACCAGCTGAAGGCATGTGTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490009.1
CDS GCA 90 bp TCCAAGGCAGTGAGGGGGCCGGACCCTGGCAGGGACTCAATGGCGTaGACAAGGTTCTTCTGCTGCCCTTCCACCTGGTTCATCATCTTA +
Preference number: 5 (lower is better)
Translates to: SKAVRGPDPGRDSMA*TRFFCCPSTWFIIL
Trigger: TAAGATGATGAACCAGGTGGAAGGGCAGCAGAAGAACCTTGTGCACGCCATTGAGTCCCTGCCAGGGTCCGGCCCCCTCACTGCCTTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438237.6
ENST00000480671.5
CDS GCA 90 bp ACATGCCTTCAGCTGGTGTCTGGTATAGCTGGTACCCCTTGGCCCTaGTGCAGGGCGGCTGTTGAAGGCTCCTGCACACGTACTATCCTC +
Preference number: 5 (lower is better)
Translates to: TCLQLVSGIAGTPWP*CRAAVEGSCTRTIL
Trigger: GAGGATAGTACGTGTGCAGGAGCCTTCAACAGCCGCCCTGCAGCAGGGCCAAGGGGTACCAGCTATACCAGACACCAGCTGAAGGCATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490009.1
CDS GCA 90 bp TCCAAGGCAGTGAGGGGGCCGGACCCTGGCAGGGACTCAATGGCGTaGACAAGGTTCTTCTGCTGCCCTTCCACCTGGTTCATCATCTTT +
Preference number: 5 (lower is better)
Translates to: SKAVRGPDPGRDSMA*TRFFCCPSTWFIIF
Trigger: AAAGATGATGAACCAGGTGGAAGGGCAGCAGAAGAACCTTGTGCACGCCATTGAGTCCCTGCCAGGGTCCGGCCCCCTCACTGCCTTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673388.1
CDS GCA 90 bp AGAGAGTCCATGAAGCCTGTTGGAGCCTGGCTGATCACCAGGATCTaGAAGGACTGCTCTCCTGACGAGGCAGTGCATATCCTCGGCAGC +
Preference number: 5 (lower is better)
Translates to: RESMKPVGAWLITRI*KDCSPDEAVHILGS
Trigger: GCTGCCGAGGATATGCACTGCCTCGTCAGGAGAGCAGTCCTTGCAGATCCTGGTGATCAGCCAGGCTCCAACAGGCTTCATGGACTCTCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467647.1
CDS CCA 90 bp TGCGTGATTGTGACAACACCGGGGGCCCCCACACTGAGGTGTCTCTaGCTACAGGGAGACGCAGAATTGGGTGTTCCATGTGGGAGCAAA +
Preference number: 5 (lower is better)
Translates to: CVIVTTPGAPTLRCL*LQGDAELGVPCGSK
Trigger: TTTGCTCCCACATGGAACACCCAATTCTGCGTCTCCCTGTAGCCAGAGACACCTCAGTGTGGGGGCCCCCGGTGTTGTCACAATCACGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000396556.7
ENST00000466604.5
ENST00000467955.5
ENST00000485205.5
CDS CCA 90 bp GCAGGGCGGCTGTTGAAGGCTCCTGCACACGTACTATCCTCTACATaGAGCCACTTCCAAAGCCAGGCAACCAACTGTGCCTCAAAGGCC +
Preference number: 5 (lower is better)
Translates to: AGRLLKAPAHVLSST*SHFQSQATNCASKA
Trigger: GGCCTTTGAGGCACAGTTGGTTGCCTGGCTTTGGAAGTGGCTCCATGTAGAGGATAGTACGTGTGCAGGAGCCTTCAACAGCCGCCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490009.1
CDS-3UTR CAA 90 bp TCTTTCTTGGGCGCGGACAGACAAAACACTGAGGTGGGGAGGGAGGTGAGAATCAGAGATTGCGCGCCATaGCACTCCAGCCTGGGTGAC +
Preference number: 5 (lower is better)
Translates to: SFLGADRQNTEVGREVRIRDCAP*HSSLGD
Trigger: GTCACCCAGGCTGGAGTGCAATGGCGCGCAATCTCT...GATTCTCACCTCCCTCCCCACCTCAGTGTTTTGTCTGTCCGCGCCCAAGAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS TCA 90 bp CCACAGATCCCGGCCTGGCTCAGGAGCATGCAGGAGTCGAGCATGTaGGGCAAGAGCTTGTATCAGCAGGAACCACACGAAGAAGCCATT +
Preference number: 5 (lower is better)
Translates to: PQIPAWLRSMQESSM*GKSLYQQEPHEEAI
Trigger: AATGGCTTCTTCGTGTGGTTCCTGCTGATACAAGCTCTTGCCTCACATGCTCGACTCCTGCATGCTCCTGAGCCAGGCCGGGATCTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467647.1
CDS GCA 90 bp GGGCCGGACCCTGGCAGGGACTCAATGGCGTGCACAAGGTTCTTCTaGTGCCCTTCCACCTGGTTCATCATCTTTGATGAGCAATGGAGA +
Preference number: 5 (lower is better)
Translates to: GPDPGRDSMACTRFF*CPSTWFIIFDEQWR
Trigger: TCTCCATTGCTCATCAAAGATGATGAACCAGGTGGAAGGGCAGCAGAAGAACCTTGTGCACGCCATTGAGTCCCTGCCAGGGTCCGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673388.1
CDS GCA 90 bp CCACTTTGGTCAGAAGTCATGCCGAAGACAGAAGCTGTGGACACATaGCTTCAGCTGGTGTCTGGTATAGCTGGTACCCCTTGGCCCTGC +
Preference number: 5 (lower is better)
Translates to: PLWSEVMPKTEAVDT*LQLVSGIAGTPWPC
Trigger: GCAGGGCCAAGGGGTACCAGCTATACCAGACACCAGCTGAAGGCATGTGTCCACAGCTTCTGTCTTCGGCATGACTTCTGACCAAAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490009.1
CDS CCA 90 bp GAGGTGTCTCTGGCTACAGGGAGACGCAGAATTGGGTGTTCCATGTaGGAGCAAAGTGAGACTTCGGCTTCGGGAGCTTGGAGCACTCTT +
Preference number: 5 (lower is better)
Translates to: EVSLATGRRRIGCSM*EQSETSASGAWSTL
Trigger: AAGAGTGCTCCAAGCTCCCGAAGCCGAAGTCTCACTTTGCTCCCACATGGAACACCCAATTCTGCGTCTCCCTGTAGCCAGAGACACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396556.7
ENST00000466604.5
ENST00000467955.5
ENST00000485205.5
CDS CCA 90 bp GACAGGCGGCAGAGTTACCTCCTGGATAAAATATTTGGGCTTCCATaGTGTGCGGAGGTTCTCGCGCTTCCGTTCCTCCACCCGTTGCTT +
Preference number: 5 (lower is better)
Translates to: DRRQSYLLDKIFGLP*CAEVLALPFLHPLL
Trigger: AAGCAACGGGTGGAGGAACGGAAGCGCGAGAACCTCCGCACACCATGGAAGCCCAAATATTTTATCCAGGAGGTAACTCTGCCGCCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR CAA 90 bp AAATCTTTAACAGCTTCCTGCCAACCCCCATCCAGCAGGAAATACTTGCTTATCCTGCGGCTGCTGCTGTaGCTACCCCCGCCGCCGTCT +
Preference number: 5 (lower is better)
Translates to: KSLTASCQPPSSRKYLLILRLLL*LPPPPS
Trigger: AGACGGCGGCGGGGGTAGCAACAGCAGCAGCCGCAG...GATAAGCAAGTATTTCCTGCTGGATGGGGGTTGGCAGGAAGCTGTTAAAGATTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000396556.7
CDS-3UTR CAA 90 bp AAGGCAAGGGTGTGCATACCAGTGACTTCCAGCCCACAGGGGAACACCCAACAACCGGCCTGCTCTTCATaGATGTTGCTGGGTTCCTGT +
Preference number: 5 (lower is better)
Translates to: KARVCIPVTSSPQGNTQQPACSS*MLLGSC
Trigger: ACAGGAACCCAGCAACATCAATGAAGAGCAGGCCGG...TTGTTGGGTGTTCCCCTGTGGGCTGGAAGTCACTGGTATGCACACCCTTGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS TCA 90 bp CACAGTCTGGGAATCTGGCAGATAGGGAGTCTCAGAGATCGCTTCTaGACTTTTACCAGCCTCCCAAAACAGCACCTCATCCCTGGGCCC +
Preference number: 5 (lower is better)
Translates to: HSLGIWQIGSLRDRF*TFTSLPKQHLIPGP
Trigger: GGGCCCAGGGATGAGGTGCTGTTTTGGGAGGCTGGTAAAAGTTCAGAAGCGATCTCTGAGACTCCCTATCTGCCAGATTCCCAGACTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466604.5
CDS GCA 90 bp GGGCCGGACCCTGGCAGGGACTCAATGGCGTGCACAAGGTTCTTCTaGTGCCCTTCCACCTGGTTCATCATCTTAGAATTCATTTCCATG +
Preference number: 5 (lower is better)
Translates to: GPDPGRDSMACTRFF*CPSTWFIILEFISM
Trigger: CATGGAAATGAATTCTAAGATGATGAACCAGGTGGAAGGGCAGCAGAAGAACCTTGTGCACGCCATTGAGTCCCTGCCAGGGTCCGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438237.6
ENST00000480671.5
CDS CCA 90 bp AGTACACCACCAGCATGTGGGGAGCTTCATCGCTCAGGGACACTATaGCTCCAGATAAAGACAGGACTCCTCGAGGCTTCTGGTGTTTGC +
Preference number: 5 (lower is better)
Translates to: STPPACGELHRSGTL*LQIKTGLLEASGVC
Trigger: GCAAACACCAGAAGCCTCGAGGAGTCCTGTCTTTATCTGGAGCCATAGTGTCCCTGAGCGATGAAGCTCCCCACATGCTGGTGGTGTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396556.7
ENST00000438237.6
ENST00000463504.5
ENST00000465626.1
ENST00000466604.5
ENST00000467955.5
ENST00000479173.1
ENST00000480671.5
CDS-3UTR CAA 90 bp AGGGATACTGGAGGGGAAGTGTCAGTTGCTCAGTTCTGCCCTCCAGAAGGTTTCGCAGTCCTCTTAGGCTaGACCCTGTCCTTGGGAACT +
Preference number: 5 (lower is better)
Translates to: RDTGGEVSVAQFCPPEGFAVLLG*TLSLGT
Trigger: AGTTCCCAAGGACAGGGTCAAGCCTAAGAGGACTGC...GAAACCTTCTGGAGGGCAGAACTGAGCAACTGACACTTCCCCTCCAGTATCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR CAA 90 bp ACCATGAGAGACGGGTGGAAAACTCCTTGGTGGGCCTTGGCTCTTAGTTGTCCCGCTGAGTACCCAGTCTaGGCACAGTTGATGCTGACT +
Preference number: 5 (lower is better)
Translates to: TMRDGWKTPWWALALSCPAEYPV*AQLMLT
Trigger: AGTCAGCATCAACTGTGCCAAGACTGGGTACTCAGC...GGGACAACTAAGAGCCAAGGCCCACCAAGGAGTTTTCCACCCGTCTCTCATGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR CAA 90 bp AAGGCAAGGGTGTGCATACCAGTGACTTCCAGCCCACAGGGGAACACCCAACAAGCTGAGTACCCAGTCTaGGCACAGTTGATGCTGACT +
Preference number: 5 (lower is better)
Translates to: KARVCIPVTSSPQGNTQQAEYPV*AQLMLT
Trigger: AGTCAGCATCAACTGTGCCAAGACTGGGTACTCAGC...TTGTTGGGTGTTCCCCTGTGGGCTGGAAGTCACTGGTATGCACACCCTTGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR CAA 90 bp ACCATGAGAGACGGGTGGAAAACTCCTTGGTGGGCCTTGGCTCTTAGTTGTCCCGCTTTCCAGAGGGGATaGAAGTATACCCAGCCATCG +
Preference number: 5 (lower is better)
Translates to: TMRDGWKTPWWALALSCPAFQRG*KYTQPS
Trigger: CGATGGCTGGGTATACTTCAATCCCCTCTGGAAAGC...GGGACAACTAAGAGCCAAGGCCCACCAAGGAGTTTTCCACCCGTCTCTCATGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS TCA 90 bp AATACTGCAGGATGCCAGCCTCGAAATCCAGTACGAAGTACTGAATaGGGCTCAAGGCATCTCACAGGAGCCAAGGAAGGTGGCCAGGTC +
Preference number: 5 (lower is better)
Translates to: NTAGCQPRNPVRSTE*GSRHLTGAKEGGQV
Trigger: GACCTGGCCACCTTCCTTGGCTCCTGTGAGATGCCTTGAGCCTCATTCAGTACTTCGTACTGGATTTCGAGGCTGGCATCCTGCAGTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467955.5
CDS GCA 90 bp CCGGACCCTGGCAGGGACTCAATGGCGTGCACAAGGTTCTTCTGCTaGCCTTCCACCTGGTTCATCATCTTAGAATTCATTTCCATGTGG +
Preference number: 5 (lower is better)
Translates to: PDPGRDSMACTRFFC*PSTWFIILEFISMW
Trigger: CCACATGGAAATGAATTCTAAGATGATGAACCAGGTGGAAGGGCAGCAGAAGAACCTTGTGCACGCCATTGAGTCCCTGCCAGGGTCCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438237.6
ENST00000480671.5
CDS CCA 90 bp AAGAGCCAAGTGTCCCATTTTTCAGCTGCTCTGTGGAATGTGACTTaGACCCGTGCCATCCCAGGATGTTTTCCGAGGCTCCTGGCTTCT +
Preference number: 5 (lower is better)
Translates to: KSQVSHFSAALWNVT*TRAIPGCFPRLLAS
Trigger: AGAAGCCAGGAGCCTCGGAAAACATCCTGGGATGGCACGGGTCCAAGTCACATTCCACAGAGCAGCTGAAAAATGGGACACTTGGCTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000396556.7
ENST00000428241.1
ENST00000429492.6
ENST00000438237.6
ENST00000467647.1
ENST00000673388.1
CDS CCA 90 bp GGTGATGGGACACTTGCTCAGCCACAAACCTTAGTTTGTAGCTTTTaGAAGGGTCATCGGCCATTGGGTGTTCGTGACAGCTGGCAGGAG +
Preference number: 5 (lower is better)
Translates to: GDGTLAQPQTLVCSF*KGHRPLGVRDSWQE
Trigger: CTCCTGCCAGCTGTCACGAACACCCAATGGCCGATGACCCTTCCAAAAGCTACAAACTAAGGTTTGTGGCTGAGCAAGTGTCCCATCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
ENST00000673388.1
CDS-3UTR CAA 90 bp TTTAATATTCCTACAAAAACAGGGCTATACTGGAAAGCTCTGCACCTCCACCCCCCGTTCCTCCACCCGTaGCTTCTCCTCCAGGTGCCG +
Preference number: 5 (lower is better)
Translates to: FNIPTKTGLYWKALHLHPPFLHP*LLLQVP
Trigger: CGGCACCTGGAGGAGAAGCAACGGGTGGAGGAACGG...GGGGTGGAGGTGCAGAGCTTTCCAGTATAGCCCTGTTTTTGTAGGAATATTAAA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR CAA 90 bp ACGTATACGGTGTGTACACACACGTGCCCCGAATGGCTCTTGAATAAATTCATTCCGTTCCTCCACCCGTaGCTTCTCCTCCAGGTGCCG +
Preference number: 5 (lower is better)
Translates to: TYTVCTHTCPEWLLNKFIPFLHP*LLLQVP
Trigger: CGGCACCTGGAGGAGAAGCAACGGGTGGAGGAACGG...AATGAATTTATTCAAGAGCCATTCGGGGCACGTGTGTGTACACACCGTATACGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR CAA 90 bp AGGAATGAGCCACTTTCTCCCTTATGGACAGTGATCGGGCCATGCCAGTTCACCTGCTCTTCATTGATGTaGCTGGGTTCCTGTGGGCCT +
Preference number: 5 (lower is better)
Translates to: RNEPLSPLWTVIGPCQFTCSSLM*LGSCGP
Trigger: AGGCCCACAGGAACCCAGCAACATCAATGAAGAGCA...GGTGAACTGGCATGGCCCGATCACTGTCCATAAGGGAGAAAGTGGCTCATTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS TCA 90 bp CGTAGGATCACAATTCACCCACAGCAGCTGCCAGACACAAGAACATaGGAAGTGCCGGGCATGCACATAGCTGATTTTGTCTCTCCAGGC +
Preference number: 5 (lower is better)
Translates to: RRITIHPQQLPDTRT*EVPGMHIADFVSPG
Trigger: GCCTGGAGAGACAAAATCAGCTATGTGCATGCCCGGCACTTCTCATGTTCTTGTGTCTGGCAGCTGCTGTGGGTGAATTGTGATCCTACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467647.1
CDS TCA 90 bp AAAGTGGTGAATTGGGAGCCAGGCGCCAGGGGAGAGGCCGTTTCCTaGTGGTCCACACCTGTTGCAGTAAAGTGTGATTTGAATACTGAC +
Preference number: 5 (lower is better)
Translates to: KVVNWEPGARGEAVS*WSTPVAVKCDLNTD
Trigger: GTCAGTATTCAAATCACACTTTACTGCAACAGGTGTGGACCATCAGGAAACGGCCTCTCCCCTGGCGCCTGGCTCCCAATTCACCACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479173.1
CDS-3UTR CAA 90 bp ACCATGAGAGACGGGTGGAAAACTCCTTGGTGGGCCTTGGCTCTTAGTTGTCCCACTTGCTTATCTTTCTaGGGCGCGGACAGACAAAAC +
Preference number: 5 (lower is better)
Translates to: TMRDGWKTPWWALALSCPTCLSF*GADRQN
Trigger: GTTTTGTCTGTCCGCGCCCAAGAAAGATAAGCAAGT...GGGACAACTAAGAGCCAAGGCCCACCAAGGAGTTTTCCACCCGTCTCTCATGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR CAA 90 bp TCCCTTATGGACAGTGATCGGGCCATGCCAGTTCACCTTCATTTTGACAGGAGTCCAGTCTTGGCACAGTaGATGCTGACTTTTCCTCCG +
Preference number: 5 (lower is better)
Translates to: SLMDSDRAMPVHLHFDRSPVLAQ*MLTFPP
Trigger: CGGAGGAAAAGTCAGCATCAACTGTGCCAAGACTGG...ACTCCTGTCAAAATGAAGGTGAACTGGCATGGCCCGATCACTGTCCATAAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR CAA 90 bp TTCCCCAAACTAAATACAAGATTGAGGCTGTGGTTGTGCATGTTTTCATGTGCACCGTTCCTCCACCCGTaGCTTCTCCTCCAGGTGCCG +
Preference number: 5 (lower is better)
Translates to: FPKLNTRLRLWLCMFSCAPFLHP*LLLQVP
Trigger: CGGCACCTGGAGGAGAAGCAACGGGTGGAGGAACGG...TGCACATGAAAACATGCACAACCACAGCCTCAATCTTGTATTTAGTTTGGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR CAA 90 bp AGGAATGAGCCACTTTCTCCCTTATGGACAGTGATCGGGCCATGCCAGTTCACCTCCAGCAGGAAATACTaGCTTATCTTTCTTGGGCGC +
Preference number: 5 (lower is better)
Translates to: RNEPLSPLWTVIGPCQFTSSRKY*LIFLGR
Trigger: GCGCCCAAGAAAGATAAGCAAGTATTTCCTGCTGGA...GGTGAACTGGCATGGCCCGATCACTGTCCATAAGGGAGAAAGTGGCTCATTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR CAA 90 bp AGCTGGAGTCAGAACCGAGCTGCCCTAGTCCATCCCTTCCCCTGCCTGGTATTTTTTCAACAAATGGTGTaGGGGAAACTGGATATCCAC +
Preference number: 5 (lower is better)
Translates to: SWSQNRAALVHPFPCLVFFQQMV*GKLDIH
Trigger: GTGGATATCCAGTTTCCCCAACACCATTTGTTGAAA...AAATACCAGGCAGGGGAAGGGATGGACTAGGGCAGCTCGGTTCTGACTCCAGCT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS TCA 90 bp GACTTTCCCTCCATAGAAAGGCTTCGTGTGGAATATCACTGTCGCTaGGTACCCAGTCTTGGCACAGTTGATGCTGACTTTTCCTCCGAG +
Preference number: 5 (lower is better)
Translates to: DFPSIERLRVEYHCR*VPSLGTVDADFSSE
Trigger: CTCGGAGGAAAAGTCAGCATCAACTGTGCCAAGACTGGGTACTCAGCGACAGTGATATTCCACACGAAGCCTTTCTATGGAGGGAAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS GCA 90 bp CTCCACCTCTGTGTTGTTTCTACTCTCCGCTTGTACCAGGCAGCATaGCTTTCTCAGGGCCCGGAGATTCTGGGAATCAAATCTAATAGT +
Preference number: 5 (lower is better)
Translates to: LHLCVVSTLRLYQAA*LSQGPEILGIKSNS
Trigger: ACTATTAGATTTGATTCCCAGAATCTCCGGGCCCTGAGAAAGGCATGCTGCCTGGTACAAGCGGAGAGTAGAAACAACACAGAGGTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469557.1
CDS GCA 90 bp ACTCCTCGAGGCTTCTGGTGTTTGCTTTGCTCATTCACAAAATACTaGAGGATGCCAGCCTCGAAATCCAGTACGAAGTACCCAGGCATC +
Preference number: 5 (lower is better)
Translates to: TPRGFWCLLCSFTKY*RMPASKSSTKYPGI
Trigger: GATGCCTGGGTACTTCGTACTGGATTTCGAGGCTGGCATCCTGCAGTATTTTGTGAATGAGCAAAGCAAACACCAGAAGCCTCGAGGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479173.1
CDS CCA 90 bp AGGGACACTATGGCTCCAGATAAAGACAGGACTCCTCGAGGCTTCTaGTGTTTGCTTTGCTCATTCACAAAATACTGCAGGATGCCAGCC +
Preference number: 5 (lower is better)
Translates to: RDTMAPDKDRTPRGF*CLLCSFTKYCRMPA
Trigger: GGCTGGCATCCTGCAGTATTTTGTGAATGAGCAAAGCAAACACCAGAAGCCTCGAGGAGTCCTGTCTTTATCTGGAGCCATAGTGTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396556.7
ENST00000438237.6
ENST00000463504.5
ENST00000465626.1
ENST00000466604.5
ENST00000467955.5
ENST00000479173.1
ENST00000480671.5
CDS CCA 90 bp TGTTGGGTAGAGGGTATCTCAGCTGAAAGGGTGGATGTTCCACTTTaGTCAGAAGTCATGCCGAAGACAGAAGCTGTGGACACATGCCTT +
Preference number: 5 (lower is better)
Translates to: CWVEGISAERVDVPL*SEVMPKTEAVDTCL
Trigger: AAGGCATGTGTCCACAGCTTCTGTCTTCGGCATGACTTCTGACCAAAGTGGAACATCCACCCTTTCAGCTGAGATACCCTCTACCCAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490009.1
CDS-3UTR CAA 90 bp TTACCCACTTTAACCTTGGTGAGTGCAGTATTTAAATGTGTAATCATACTCAGACTGCGGCTGCTGCTGTaGCTACCCCCGCCGCCGTCT +
Preference number: 5 (lower is better)
Translates to: LPTLTLVSAVFKCVIILRLRLLL*LPPPPS
Trigger: AGACGGCGGCGGGGGTAGCAACAGCAGCAGCCGCAG...TCTGAGTATGATTACACATTTAAATACTGCACTCACCAAGGTTAAAGTGGGTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000438237.6
CDS-3UTR CAA 90 bp ACGTATACGGTGTGTACACACACGTGCCCCGAATGGCTCTTGAATAAATTCATTAGGAGGTTGGTGTATTaGCTGAGCACGCCCTCGAGC +
Preference number: 5 (lower is better)
Translates to: TYTVCTHTCPEWLLNKFIRRLVY*LSTPSS
Trigger: GCTCGAGGGCGTGCTCAGCAAATACACCAACCTCCT...AATGAATTTATTCAAGAGCCATTCGGGGCACGTGTGTGTACACACCGTATACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000438237.6
CDS-3UTR CAA 90 bp TCTTTCTTGGGCGCGGACAGACAAAACACTGAGGTGGGGAGGGAGGTGAGAATCTGCCCCGAATGGCTCTaGAATAAATTCATTCCTCTA +
Preference number: 5 (lower is better)
Translates to: SFLGADRQNTEVGREVRICPEWL*NKFIPL
Trigger: TAGAGGAATGAATTTATTCAAGAGCCATTCGGGGCA...GATTCTCACCTCCCTCCCCACCTCAGTGTTTTGTCTGTCCGCGCCCAAGAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR CAA 90 bp AGGAATGAGCCACTTTCTCCCTTATGGACAGTGATCGGGCCATGCCAGTTCACCTGGAGAGGGATACAATaGTATAGGGGCACAATAGTG +
Preference number: 5 (lower is better)
Translates to: RNEPLSPLWTVIGPCQFTWRGIQ*YRGTIV
Trigger: CACTATTGTGCCCCTATACAATTGTATCCCTCTCCA...GGTGAACTGGCATGGCCCGATCACTGTCCATAAGGGAGAAAGTGGCTCATTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS GCA 90 bp ACTCCTCGAGGCTTCTGGTGTTTGCTTTGCTCATTCACAAAATACTaGAGGATGCCAGCCTCGAAATCCAGTACGAAGTACCTGTTCTGC +
Preference number: 5 (lower is better)
Translates to: TPRGFWCLLCSFTKY*RMPASKSSTKYLFC
Trigger: GCAGAACAGGTACTTCGTACTGGATTTCGAGGCTGGCATCCTGCAGTATTTTGTGAATGAGCAAAGCAAACACCAGAAGCCTCGAGGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396556.7
ENST00000438237.6
ENST00000465626.1
ENST00000480671.5
CDS GCA 90 bp GCTCCAGATAAAGACAGGACTCCTCGAGGCTTCTGGTGTTTGCTTTaGTCATTCACAAAATACTGCAGGATGCCAGCCTCGAAATCCAGT +
Preference number: 5 (lower is better)
Translates to: APDKDRTPRGFWCLL*SFTKYCRMPASKSS
Trigger: ACTGGATTTCGAGGCTGGCATCCTGCAGTATTTTGTGAATGAGCAAAGCAAACACCAGAAGCCTCGAGGAGTCCTGTCTTTATCTGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396556.7
ENST00000438237.6
ENST00000463504.5
ENST00000465626.1
ENST00000466604.5
ENST00000467955.5
ENST00000479173.1
ENST00000480671.5
CDS GCA 90 bp ACTCCTCGAGGCTTCTGGTGTTTGCTTTGCTCATTCACAAAATACTaGAGGATGCCAGCCTCGAAATCCAGTACGAAGTACAGCTCTGGA +
Preference number: 5 (lower is better)
Translates to: TPRGFWCLLCSFTKY*RMPASKSSTKYSSG
Trigger: TCCAGAGCTGTACTTCGTACTGGATTTCGAGGCTGGCATCCTGCAGTATTTTGTGAATGAGCAAAGCAAACACCAGAAGCCTCGAGGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463504.5
CDS-3UTR CAA 90 bp TCCCTTATGGACAGTGATCGGGCCATGCCAGTTCACCTTCATTTTGACAGGAGTTCCTGGATAAAATATTaGGGCTTCCATGGTGTGCGG +
Preference number: 5 (lower is better)
Translates to: SLMDSDRAMPVHLHFDRSSWIKY*GFHGVR
Trigger: CCGCACACCATGGAAGCCCAAATATTTTATCCAGGA...ACTCCTGTCAAAATGAAGGTGAACTGGCATGGCCCGATCACTGTCCATAAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR CAA 90 bp TCTGAACCAGAATCCAACCTTGAAATCTCCTTCAGTCCACAGCCTGACTCTGGGGAGGATGTGGAGAAATaGGATCCCTTGTGCATTGCT +
Preference number: 5 (lower is better)
Translates to: SEPESNLEISFSPQPDSGEDVEK*DPLCIA
Trigger: AGCAATGCACAAGGGATCCAATTTCTCCACATCCTC...CCCAGAGTCAGGCTGTGGACTGAAGGAGATTTCAAGGTTGGATTCTGGTTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS CCA 90 bp CATGGGTCCCTGCTTCTCAAGAGGTCTGATCTTCTTGGGATACACTaGCAGTGTGGTTGTGTCGATGACTTTGGTTTCTCCATTGTTGTA +
Preference number: 5 (lower is better)
Translates to: HGSLLLKRSDLLGIH*QCGCVDDFGFSIVV
Trigger: TACAACAATGGAGAAACCAAAGTCATCGACACAACCACACTGCCAGTGTATCCCAAGAAGATCAGACCTCTTGAGAAGCAGGGACCCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS CCA 90 bp TCCGCTTGTACCAGGCAGCATGCCTTTCTCAGGGCCCGGAGATTCTaGGAATCAAATCTAATAGTAGTAGTTGGCATTCTGCTACTACTA +
Preference number: 5 (lower is better)
Translates to: SACTRQHAFLRARRF*ESNLIVVVGILLLL
Trigger: TAGTAGTAGCAGAATGCCAACTACTACTATTAGATTTGATTCCCAGAATCTCCGGGCCCTGAGAAAGGCATGCTGCCTGGTACAAGCGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469557.1
CDS-3UTR CAA 90 bp TTTAATATTCCTACAAAAACAGGGCTATACTGGAAAGCTCTGCACCTCCACCCCCCAGTCTTGGCACAGTaGATGCTGACTTTTCCTCCG +
Preference number: 5 (lower is better)
Translates to: FNIPTKTGLYWKALHLHPPVLAQ*MLTFPP
Trigger: CGGAGGAAAAGTCAGCATCAACTGTGCCAAGACTGG...GGGGTGGAGGTGCAGAGCTTTCCAGTATAGCCCTGTTTTTGTAGGAATATTAAA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR CAA 90 bp GTTAAGACAATGCTACTCAAAGGGATCTACAGATTCAATGCAATCCCTATCAAACAGCCCACCCAGGTGTaGAGATGGCCTGTGAGGCAC +
Preference number: 5 (lower is better)
Translates to: VKTMLLKGIYRFNAIPIKQPTQV*RWPVRH
Trigger: GTGCCTCACAGGCCATCTCAACACCTGGGTGGGCTG...TTTGATAGGGATTGCATTGAATCTGTAGATCCCTTTGAGTAGCATTGTCTTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS GCA 90 bp ACTCCTCGAGGCTTCTGGTGTTTGCTTTGCTCATTCACAAAATACTaGAGGATGCCAGCCTCGAAATCCAGTACGAAGTACCGAAAAACT +
Preference number: 5 (lower is better)
Translates to: TPRGFWCLLCSFTKY*RMPASKSSTKYRKT
Trigger: AGTTTTTCGGTACTTCGTACTGGATTTCGAGGCTGGCATCCTGCAGTATTTTGTGAATGAGCAAAGCAAACACCAGAAGCCTCGAGGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466604.5
CDS-3UTR CAA 90 bp ATTTCTCTCTCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGTGAATGCAGGAGGTTGGTGTATTaGCTGAGCACGCCCTCGAGC +
Preference number: 5 (lower is better)
Translates to: ISLSLIISWMLIQGLSECRRLVY*LSTPSS
Trigger: GCTCGAGGGCGTGCTCAGCAAATACACCAACCTCCT...GCATTCACTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGAGAGAGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000438237.6
CDS-3UTR CAA 90 bp ATGCTAATACAAGGTCTCAGTGAATGCCAACAAAACCCTGATACTCTACTACTTCAGGGAGACGCAGAATaGGGTGTTCCATGTGGGAGC +
Preference number: 5 (lower is better)
Translates to: MLIQGLSECQQNPDTLLLQGDAE*GVPCGS
Trigger: GCTCCCACATGGAACACCCAATTCTGCGTCTCCCTG...AAGTAGTAGAGTATCAGGGTTTTGTTGGCATTCACTGAGACCTTGTATTAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396556.7
CDS-3UTR CAA 90 bp TCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGTGAATGCCAACAAAACTCTGTGGAATGTGACTaGGACCCGTGCCATCCCAGG +
Preference number: 5 (lower is better)
Translates to: SLIISWMLIQGLSECQQNSVECD*DPCHPR
Trigger: CCTGGGATGGCACGGGTCCAAGTCACATTCCACAGA...GTTTTGTTGGCATTCACTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR CAA 90 bp ACGTATACGGTGTGTACACACACGTGCCCCGAATGGCTCTTGAATAAATTCATTATTGCCCAGGTTATGTaGGCACTGGCTGATGGCAAA +
Preference number: 5 (lower is better)
Translates to: TYTVCTHTCPEWLLNKFIIAQVM*ALADGK
Trigger: TTTGCCATCAGCCAGTGCCAACATAACCTGGGCAAT...AATGAATTTATTCAAGAGCCATTCGGGGCACGTGTGTGTACACACCGTATACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR CAA 90 bp TTTAATATTCCTACAAAAACAGGGCTATACTGGAAAGCTCTGCACCTCCACCCCGTGGGAAGCACCACCTaGGTCAAATCCATTCCAAGT +
Preference number: 5 (lower is better)
Translates to: FNIPTKTGLYWKALHLHPVGSTT*VKSIPS
Trigger: ACTTGGAATGGATTTGACCAAGGTGGTGCTTCCCAC...GGGGTGGAGGTGCAGAGCTTTCCAGTATAGCCCTGTTTTTGTAGGAATATTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR CAA 90 bp ATTTCTCTCTCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGTGAATGCAAGGGTCATCGGCCATaGGGTGTTCGTGACAGCTGG +
Preference number: 5 (lower is better)
Translates to: ISLSLIISWMLIQGLSECKGHRP*GVRDSW
Trigger: CCAGCTGTCACGAACACCCAATGGCCGATGACCCTT...GCATTCACTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGAGAGAGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR CAA 90 bp TTTAATATTCCTACAAAAACAGGGCTATACTGGAAAGCTCTGCACCTCCACCCCAGAGGTCTGATCTTCTaGGGATACACTGGCAGTGTG +
Preference number: 5 (lower is better)
Translates to: FNIPTKTGLYWKALHLHPRGLIF*GYTGSV
Trigger: CACACTGCCAGTGTATCCCAAGAAGATCAGACCTCT...GGGGTGGAGGTGCAGAGCTTTCCAGTATAGCCCTGTTTTTGTAGGAATATTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR CAA 90 bp TTCCCCAAACTAAATACAAGATTGAGGCTGTGGTTGTGCATGTTTTCATGTGCAACTCCTTGGTGGGCCTaGGCTCTTAGTTGTCCCAGA +
Preference number: 5 (lower is better)
Translates to: FPKLNTRLRLWLCMFSCATPWWA*ALSCPR
Trigger: TCTGGGACAACTAAGAGCCAAGGCCCACCAAGGAGT...TGCACATGAAAACATGCACAACCACAGCCTCAATCTTGTATTTAGTTTGGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR CAA 90 bp AAATCTTTAACAGCTTCCTGCCAACCCCCATCCAGCAGGAAATACTTGCTTATCAAAAGGGGAGCTTGGTaGGCTTCCATCGAGACTGAT +
Preference number: 5 (lower is better)
Translates to: KSLTASCQPPSSRKYLLIKRGAW*ASIETD
Trigger: ATCAGTCTCGATGGAAGCCAACCAAGCTCCCCTTTT...GATAAGCAAGTATTTCCTGCTGGATGGGGGTTGGCAGGAAGCTGTTAAAGATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS TCA 90 bp GGTGGGAAGCACCACCTTGGTCAAATCCATTCCAAGTTTGAGTTGTaGAATGAGATGAAGAATTATACTACGCTGATCCTCCATGACGCC +
Preference number: 5 (lower is better)
Translates to: GGKHHLGQIHSKFEL*NEMKNYTTLILHDA
Trigger: GGCGTCATGGAGGATCAGCGTAGTATAATTCTTCATCTCATTTCACAACTCAAACTTGGAATGGATTTGACCAAGGTGGTGCTTCCCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
ENST00000467598.5
ENST00000472175.1
ENST00000673388.1
CDS CCA 90 bp TTTGTTCGTCTTCAGCAGAGTTTGGTAAAATTGCCCAGGTTATGTTaGCACTGGCTGATGGCAAAGAGCCAAGTGTCCCATTTTTCAGCT +
Preference number: 5 (lower is better)
Translates to: FVRLQQSLVKLPRLC*HWLMAKSQVSHFSA
Trigger: AGCTGAAAAATGGGACACTTGGCTCTTTGCCATCAGCCAGTGCCAACATAACCTGGGCAATTTTACCAAACTCTGCTGAAGACGAACAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000396556.7
ENST00000428241.1
ENST00000429492.6
ENST00000438237.6
ENST00000467647.1
ENST00000673388.1
CDS CCA 90 bp TCTCAGGGCCCGGAGATTCTGGGAATCAAATCTAATAGTAGTAGTTaGCATTCTGCTACTACTACAAACAACGGTAGCAGGCACATATGG +
Preference number: 5 (lower is better)
Translates to: SQGPEILGIKSNSSS*HSATTTNNGSRHIW
Trigger: CCATATGTGCCTGCTACCGTTGTTTGTAGTAGTAGCAGAATGCCAACTACTACTATTAGATTTGATTCCCAGAATCTCCGGGCCCTGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469557.1
CDS CCA 90 bp CCTCGAAATCCAGTACGAAGTACAGCTCTGGAACAGTTAGGGTTTTaGAAGAGGAAAAACCACCGAACACAACCCATGCACAGAAAGATA +
Preference number: 5 (lower is better)
Translates to: PRNPVRSTALEQLGF*KRKNHRTQPMHRKI
Trigger: TATCTTTCTGTGCATGGGTTGTGTTCGGTGGTTTTTCCTCTTCCAAAACCCTAACTGTTCCAGAGCTGTACTTCGTACTGGATTTCGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463504.5
CDS-3UTR CAA 90 bp ATTTCTCTCTCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGTGAATGCCTCTGCTGTAACAAGTaGAGGCACTCCCCAAGGCAG +
Preference number: 5 (lower is better)
Translates to: ISLSLIISWMLIQGLSECLCCNK*RHSPRQ
Trigger: CTGCCTTGGGGAGTGCCTCAACTTGTTACAGCAGAG...GCATTCACTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGAGAGAGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR CAA 90 bp ATGCTAATACAAGGTCTCAGTGAATGCCAACAAAACCCTGATACTCTACTACTTCTCTGCTGTAACAAGTaGAGGCACTCCCCAAGGCAG +
Preference number: 5 (lower is better)
Translates to: MLIQGLSECQQNPDTLLLLCCNK*RHSPRQ
Trigger: CTGCCTTGGGGAGTGCCTCAACTTGTTACAGCAGAG...AAGTAGTAGAGTATCAGGGTTTTGTTGGCATTCACTGAGACCTTGTATTAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR CAA 90 bp ACTGAAACCATGGAATATTTATGCAGGCGTTATGTATGTTTTAGTCACAGTGCTTCTGTGGAATGTGACTaGGACCCGTGCCATCCCAGG +
Preference number: 5 (lower is better)
Translates to: TETMEYLCRRYVCFSHSASVECD*DPCHPR
Trigger: CCTGGGATGGCACGGGTCCAAGTCACATTCCACAGA...AGCACTGTGACTAAAACATACATAACGCCTGCATAAATATTCCATGGTTTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR CAA 90 bp ATTTCTCTCTCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGTGAATGCATTCAGAGCCTGAGTTaGGCTCTGGCTCTGGCTGTG +
Preference number: 5 (lower is better)
Translates to: ISLSLIISWMLIQGLSECIQSLS*ALALAV
Trigger: CACAGCCAGAGCCAGAGCCAAACTCAGGCTCTGAAT...GCATTCACTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGAGAGAGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR CAA 90 bp TCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGTGAATGCCAACAAAACATTCAGAGCCTGAGTTaGGCTCTGGCTCTGGCTGTG +
Preference number: 5 (lower is better)
Translates to: SLIISWMLIQGLSECQQNIQSLS*ALALAV
Trigger: CACAGCCAGAGCCAGAGCCAAACTCAGGCTCTGAAT...GTTTTGTTGGCATTCACTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR CAA 90 bp ATGCTAATACAAGGTCTCAGTGAATGCCAACAAAACCCTGATACTCTACTACTTGCAGTCCTCTTAGGCTaGACCCTGTCCTTGGGAACT +
Preference number: 5 (lower is better)
Translates to: MLIQGLSECQQNPDTLLLAVLLG*TLSLGT
Trigger: AGTTCCCAAGGACAGGGTCAAGCCTAAGAGGACTGC...AAGTAGTAGAGTATCAGGGTTTTGTTGGCATTCACTGAGACCTTGTATTAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR CAA 90 bp ATTTCTCTCTCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGTGAATGCGCAGTCCTCTTAGGCTaGACCCTGTCCTTGGGAACT +
Preference number: 5 (lower is better)
Translates to: ISLSLIISWMLIQGLSECAVLLG*TLSLGT
Trigger: AGTTCCCAAGGACAGGGTCAAGCCTAAGAGGACTGC...GCATTCACTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGAGAGAGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR CAA 90 bp ACTGAAACCATGGAATATTTATGCAGGCGTTATGTATGTTTTAGTCACAGTGCTAAGGGTCATCGGCCATaGGGTGTTCGTGACAGCTGG +
Preference number: 5 (lower is better)
Translates to: TETMEYLCRRYVCFSHSAKGHRP*GVRDSW
Trigger: CCAGCTGTCACGAACACCCAATGGCCGATGACCCTT...AGCACTGTGACTAAAACATACATAACGCCTGCATAAATATTCCATGGTTTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR CAA 90 bp ATGCTAATACAAGGTCTCAGTGAATGCCAACAAAACCCTGATACTCTACTACTTACTCCTTGGTGGGCCTaGGCTCTTAGTTGTCCCAGA +
Preference number: 5 (lower is better)
Translates to: MLIQGLSECQQNPDTLLLTPWWA*ALSCPR
Trigger: TCTGGGACAACTAAGAGCCAAGGCCCACCAAGGAGT...AAGTAGTAGAGTATCAGGGTTTTGTTGGCATTCACTGAGACCTTGTATTAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR CAA 90 bp TCCCTTATGGACAGTGATCGGGCCATGCCAGTTCACCTTCATTTTGACAGGAGTAAACTAAATACAAGATaGAGGCTGTGGTTGTGCATG +
Preference number: 5 (lower is better)
Translates to: SLMDSDRAMPVHLHFDRSKLNTR*RLWLCM
Trigger: CATGCACAACCACAGCCTCAATCTTGTATTTAGTTT...ACTCCTGTCAAAATGAAGGTGAACTGGCATGGCCCGATCACTGTCCATAAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR CAA 90 bp TCCCTTATGGACAGTGATCGGGCCATGCCAGTTCACCTTCATTTTGACAGGAGTTTAACTGAGGAAGACTaGCCCAGTGAAAACTACAAA +
Preference number: 5 (lower is better)
Translates to: SLMDSDRAMPVHLHFDRSLTEED*PSENYK
Trigger: TTTGTAGTTTTCACTGGGCAAGTCTTCCTCAGTTAA...ACTCCTGTCAAAATGAAGGTGAACTGGCATGGCCCGATCACTGTCCATAAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS GCA 90 bp CACGAAGAAGCCATTATTCAGGGGAGCGACATAATATATTGTAACTaGTCCCATCATGTCAATAGGCACCATGTTAACGGGTCTGTTCGA +
Preference number: 5 (lower is better)
Translates to: HEEAIIQGSDIIYCN*SHHVNRHHVNGSVR
Trigger: TCGAACAGACCCGTTAACATGGTGCCTATTGACATGATGGGAGCAGTTACAATATATTATGTCGCTCCCCTGAATAATGGCTTCTTCGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467647.1
CDS GCA 90 bp TTAAATTACACAGCCTCAACCCAGTTAATCTATCCAGTAAACCAGTaGAGCAAACAGCTTTCCTCTGTCAGGAGAGTGTGTACCTCTCTG +
Preference number: 5 (lower is better)
Translates to: LNYTASTQLIYPVNQ*SKQLSSVRRVCTSL
Trigger: CAGAGAGGTACACACTCTCCTGACAGAGGAAAGCTGTTTGCTGCACTGGTTTACTGGATAGATTAACTGGGTTGAGGCTGTGTAATTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466604.5
CDS-3UTR CAA 90 bp CTGGTCTTAAGAAAGCAGACAAAAGGCACAAAATTAGTATTACTACAGAGAAGCCTCTGCTGTAACAAGTaGAGGCACTCCCCAAGGCAG +
Preference number: 5 (lower is better)
Translates to: LVLRKQTKGTKLVLLQRSLCCNK*RHSPRQ
Trigger: CTGCCTTGGGGAGTGCCTCAACTTGTTACAGCAGAG...GCTTCTCTGTAGTAATACTAATTTTGTGCCTTTTGTCTGCTTTCTTAAGACCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR CAA 90 bp ACGTATACGGTGTGTACACACACGTGCCCCGAATGGCTCTTGAATAAATTCATTCAGAGTTTGGTAAAATaGCCCAGGTTATGTTGGCAC +
Preference number: 5 (lower is better)
Translates to: TYTVCTHTCPEWLLNKFIQSLVK*PRLCWH
Trigger: GTGCCAACATAACCTGGGCAATTTTACCAAACTCTG...AATGAATTTATTCAAGAGCCATTCGGGGCACGTGTGTGTACACACCGTATACGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR CAA 90 bp CATAAATCTTTAACAGCTTCCTGCCAACCCCCATCCAGCAGGAAATACTTGCTTCAGAGTTTGGTAAAATaGCCCAGGTTATGTTGGCAC +
Preference number: 5 (lower is better)
Translates to: HKSLTASCQPPSSRKYLLQSLVK*PRLCWH
Trigger: GTGCCAACATAACCTGGGCAATTTTACCAAACTCTG...AAGCAAGTATTTCCTGCTGGATGGGGGTTGGCAGGAAGCTGTTAAAGATTTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR CAA 90 bp GTATATAATTTCTCTCTCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGAAGGGTCATCGGCCATaGGGTGTTCGTGACAGCTGG +
Preference number: 5 (lower is better)
Translates to: VYNFSLSHHFLDANTRSQKGHRP*GVRDSW
Trigger: CCAGCTGTCACGAACACCCAATGGCCGATGACCCTT...CTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGAGAGAGAAATTATATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR CAA 90 bp ATTTCTCTCTCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGTGAATGCCCAGTCTTGGCACAGTaGATGCTGACTTTTCCTCCG +
Preference number: 5 (lower is better)
Translates to: ISLSLIISWMLIQGLSECPVLAQ*MLTFPP
Trigger: CGGAGGAAAAGTCAGCATCAACTGTGCCAAGACTGG...GCATTCACTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGAGAGAGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR CAA 90 bp CATAAATCTTTAACAGCTTCCTGCCAACCCCCATCCAGCAGGAAATACTTGCTTAACCAGAATCCAACCTaGAAATCTCCTTCAGTCCAC +
Preference number: 5 (lower is better)
Translates to: HKSLTASCQPPSSRKYLLNQNPT*KSPSVH
Trigger: GTGGACTGAAGGAGATTTCAAGGTTGGATTCTGGTT...AAGCAAGTATTTCCTGCTGGATGGGGGTTGGCAGGAAGCTGTTAAAGATTTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS TCA 90 bp CTCTTAGAATTCATTTCCATGTGGTATTTGGCACAAGCTCGAAGCTaGGTCACCCAGAATTGTTTCTCTTTTGCATCAGCAGCTCTCAGT +
Preference number: 5 (lower is better)
Translates to: LLEFISMWYLAQARS*VTQNCFSFASAALS
Trigger: ACTGAGAGCTGCTGATGCAAAAGAGAAACAATTCTGGGTGACTCAGCTTCGAGCTTGTGCCAAATACCACATGGAAATGAATTCTAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000466604.5
ENST00000467955.5
CDS-3UTR CAA 90 bp GTATATAATTTCTCTCTCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGATTCAGAGCCTGAGTTaGGCTCTGGCTCTGGCTGTG +
Preference number: 5 (lower is better)
Translates to: VYNFSLSHHFLDANTRSQIQSLS*ALALAV
Trigger: CACAGCCAGAGCCAGAGCCAAACTCAGGCTCTGAAT...CTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGAGAGAGAAATTATATAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR CAA 90 bp TCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGTGAATGCCAACAAAACGTGGGAAGCACCACCTaGGTCAAATCCATTCCAAGT +
Preference number: 5 (lower is better)
Translates to: SLIISWMLIQGLSECQQNVGSTT*VKSIPS
Trigger: ACTTGGAATGGATTTGACCAAGGTGGTGCTTCCCAC...GTTTTGTTGGCATTCACTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR CAA 90 bp ATGCTAATACAAGGTCTCAGTGAATGCCAACAAAACCCTGATACTCTACTACTTATGGTGTTGGTTGGGTaGTGCTTCACTTCTGCGGTA +
Preference number: 5 (lower is better)
Translates to: MLIQGLSECQQNPDTLLLMVLVG*CFTSAV
Trigger: TACCGCAGAAGTGAAGCACAACCCAACCAACACCAT...AAGTAGTAGAGTATCAGGGTTTTGTTGGCATTCACTGAGACCTTGTATTAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR CAA 90 bp ACGTATACGGTGTGTACACACACGTGCCCCGAATGGCTCTTGAATAAATTCATTTTACAAACAATGGTGTaGGTTGGGTTGTGCTTCACT +
Preference number: 5 (lower is better)
Translates to: TYTVCTHTCPEWLLNKFILQTMV*VGLCFT
Trigger: AGTGAAGCACAACCCAACCAACACCATTGTTTGTAA...AATGAATTTATTCAAGAGCCATTCGGGGCACGTGTGTGTACACACCGTATACGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR CAA 90 bp ACGTATACGGTGTGTACACACACGTGCCCCGAATGGCTCTTGAATAAATTCATTTGCCCCGAATGGCTCTaGAATAAATTCATTCCTCTA +
Preference number: 5 (lower is better)
Translates to: TYTVCTHTCPEWLLNKFICPEWL*NKFIPL
Trigger: TAGAGGAATGAATTTATTCAAGAGCCATTCGGGGCA...AATGAATTTATTCAAGAGCCATTCGGGGCACGTGTGTGTACACACCGTATACGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS TCA 90 bp ATCTTAGAATTCATTTCCATGTGGTATTTGGCACAAGCTCGAAGCTaGGTCACCCAGAATTGTTTCTCTTTTGCATCAGCAGCTCTCAGT +
Preference number: 5 (lower is better)
Translates to: ILEFISMWYLAQARS*VTQNCFSFASAALS
Trigger: ACTGAGAGCTGCTGATGCAAAAGAGAAACAATTCTGGGTGACTCAGCTTCGAGCTTGTGCCAAATACCACATGGAAATGAATTCTAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438237.6
ENST00000480671.5
CDS TCA 90 bp GAGTTGGTTCCACTTCTTGGTCAAATCCATTCCAAGTTTGAGTTGTaGAATGAGATGAAGAATTATACTACGCTGATCCTCCATGACGCC +
Preference number: 5 (lower is better)
Translates to: ELVPLLGQIHSKFEL*NEMKNYTTLILHDA
Trigger: GGCGTCATGGAGGATCAGCGTAGTATAATTCTTCATCTCATTTCACAACTCAAACTTGGAATGGATTTGACCAAGAAGTGGAACCAACTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479396.1
CDS-3UTR CAA 90 bp GTTAAGACAATGCTACTCAAAGGGATCTACAGATTCAATGCAATCCCTATCAAAATTGCCCAGGTTATGTaGGCACTGGCTGATGGCAAA +
Preference number: 5 (lower is better)
Translates to: VKTMLLKGIYRFNAIPIKIAQVM*ALADGK
Trigger: TTTGCCATCAGCCAGTGCCAACATAACCTGGGCAAT...TTTGATAGGGATTGCATTGAATCTGTAGATCCCTTTGAGTAGCATTGTCTTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR CAA 90 bp GTATATAATTTCTCTCTCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGGCTGAGTACCCAGTCTaGGCACAGTTGATGCTGACT +
Preference number: 5 (lower is better)
Translates to: VYNFSLSHHFLDANTRSQAEYPV*AQLMLT
Trigger: AGTCAGCATCAACTGTGCCAAGACTGGGTACTCAGC...CTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGAGAGAGAAATTATATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR CAA 90 bp ACTGAAACCATGGAATATTTATGCAGGCGTTATGTATGTTTTAGTCACAGTGCTATGGTGTTGGTTGGGTaGTGCTTCACTTCTGCGGTA +
Preference number: 5 (lower is better)
Translates to: TETMEYLCRRYVCFSHSAMVLVG*CFTSAV
Trigger: TACCGCAGAAGTGAAGCACAACCCAACCAACACCAT...AGCACTGTGACTAAAACATACATAACGCCTGCATAAATATTCCATGGTTTCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR CAA 90 bp CTGGTCTTAAGAAAGCAGACAAAAGGCACAAAATTAGTATTACTACAGAGAAGCAGAGGTCTGATCTTCTaGGGATACACTGGCAGTGTG +
Preference number: 5 (lower is better)
Translates to: LVLRKQTKGTKLVLLQRSRGLIF*GYTGSV
Trigger: CACACTGCCAGTGTATCCCAAGAAGATCAGACCTCT...GCTTCTCTGTAGTAATACTAATTTTGTGCCTTTTGTCTGCTTTCTTAAGACCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR CAA 90 bp GTTAAGACAATGCTACTCAAAGGGATCTACAGATTCAATGCAATCCCTATCAAAAGAGGTCTGATCTTCTaGGGATACACTGGCAGTGTG +
Preference number: 5 (lower is better)
Translates to: VKTMLLKGIYRFNAIPIKRGLIF*GYTGSV
Trigger: CACACTGCCAGTGTATCCCAAGAAGATCAGACCTCT...TTTGATAGGGATTGCATTGAATCTGTAGATCCCTTTGAGTAGCATTGTCTTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR CAA 90 bp ATGCTAATACAAGGTCTCAGTGAATGCCAACAAAACCCTGATACTCTACTACTTTCCTGGATAAAATATTaGGGCTTCCATGGTGTGCGG +
Preference number: 5 (lower is better)
Translates to: MLIQGLSECQQNPDTLLLSWIKY*GFHGVR
Trigger: CCGCACACCATGGAAGCCCAAATATTTTATCCAGGA...AAGTAGTAGAGTATCAGGGTTTTGTTGGCATTCACTGAGACCTTGTATTAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR CAA 90 bp ATACTCTACTACTTTAATATTCCTACAAAAACAGGGCTATACTGGAAAGCTCTGGCTTTCCAGAGGGGATaGAAGTATACCCAGCCATCG +
Preference number: 5 (lower is better)
Translates to: ILYYFNIPTKTGLYWKALAFQRG*KYTQPS
Trigger: CGATGGCTGGGTATACTTCAATCCCCTCTGGAAAGC...CAGAGCTTTCCAGTATAGCCCTGTTTTTGTAGGAATATTAAAGTAGTAGAGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR CAA 90 bp GTATATAATTTCTCTCTCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGGCTTTCCAGAGGGGATaGAAGTATACCCAGCCATCG +
Preference number: 5 (lower is better)
Translates to: VYNFSLSHHFLDANTRSQAFQRG*KYTQPS
Trigger: CGATGGCTGGGTATACTTCAATCCCCTCTGGAAAGC...CTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGAGAGAGAAATTATATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR CAA 90 bp TTCCCCAAACTAAATACAAGATTGAGGCTGTGGTTGTGCATGTTTTCATGTGCAGGTATTTATCCAGTCTaGGGGGCTCAGCAAGAAAAA +
Preference number: 5 (lower is better)
Translates to: FPKLNTRLRLWLCMFSCAGIYPV*GAQQEK
Trigger: TTTTTCTTGCTGAGCCCCCAAGACTGGATAAATACC...TGCACATGAAAACATGCACAACCACAGCCTCAATCTTGTATTTAGTTTGGGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR CAA 90 bp GTATATAATTTCTCTCTCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGACCTGTCCTGAAGCCTaGTCCAAAGCTGGAGTCAGA +
Preference number: 5 (lower is better)
Translates to: VYNFSLSHHFLDANTRSQTCPEA*SKAGVR
Trigger: TCTGACTCCAGCTTTGGACAAGGCTTCAGGACAGGT...CTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGAGAGAGAAATTATATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR CAA 90 bp ATAGTGGCTTTTAAGGTACTGGTAAACAGGTTTCTTTGCTTAAGCAGTGGCTACTTTAACCAGGAAAAGTaGAGCTCACTTAGAGCCACC +
Preference number: 5 (lower is better)
Translates to: IVAFKVLVNRFLCLSSGYFNQEK*SSLRAT
Trigger: GGTGGCTCTAAGTGAGCTCAACTTTTCCTGGTTAAA...GTAGCCACTGCTTAAGCAAAGAAACCTGTTTACCAGTACCTTAAAAGCCACTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS GCA 90 bp TTAGAGCAAGACAGGAATAACGTGAAGTCGCTCAGACACTCAGCTTaGCATAATATAGTCCCCTCAATATTTTCTTGCTTCTCCATATCT +
Preference number: 5 (lower is better)
Translates to: LEQDRNNVKSLRHSA*HNIVPSIFSCFSIS
Trigger: AGATATGGAGAAGCAAGAAAATATTGAGGGGACTATATTATGGCAAGCTGAGTGTCTGAGCGACTTCACGTTATTCCTGTCTTGCTCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479396.1
CDS-3UTR CAA 90 bp GTATATAATTTCTCTCTCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGATTGCCCAGGTTATGTaGGCACTGGCTGATGGCAAA +
Preference number: 5 (lower is better)
Translates to: VYNFSLSHHFLDANTRSQIAQVM*ALADGK
Trigger: TTTGCCATCAGCCAGTGCCAACATAACCTGGGCAAT...CTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGAGAGAGAAATTATATAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR CAA 90 bp TTACCCACTTTAACCTTGGTGAGTGCAGTATTTAAATGTGTAATCATACTCAGAGTGGGAAGCACCACCTaGGTCAAATCCATTCCAAGT +
Preference number: 5 (lower is better)
Translates to: LPTLTLVSAVFKCVIILRVGSTT*VKSIPS
Trigger: ACTTGGAATGGATTTGACCAAGGTGGTGCTTCCCAC...TCTGAGTATGATTACACATTTAAATACTGCACTCACCAAGGTTAAAGTGGGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR CAA 90 bp GTATATAATTTCTCTCTCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGATGGTGTTGGTTGGGTaGTGCTTCACTTCTGCGGTA +
Preference number: 5 (lower is better)
Translates to: VYNFSLSHHFLDANTRSQMVLVG*CFTSAV
Trigger: TACCGCAGAAGTGAAGCACAACCCAACCAACACCAT...CTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGAGAGAGAAATTATATAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR CAA 90 bp ATTTCTCTCTCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGTGAATGCAAACAATGGTGTTGGTaGGGTTGTGCTTCACTTCTG +
Preference number: 5 (lower is better)
Translates to: ISLSLIISWMLIQGLSECKQWCW*GCASLL
Trigger: CAGAAGTGAAGCACAACCCAACCAACACCATTGTTT...GCATTCACTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGAGAGAGAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR CAA 90 bp ACTGAAACCATGGAATATTTATGCAGGCGTTATGTATGTTTTAGTCACAGTGCTTCCTGGATAAAATATTaGGGCTTCCATGGTGTGCGG +
Preference number: 5 (lower is better)
Translates to: TETMEYLCRRYVCFSHSASWIKY*GFHGVR
Trigger: CCGCACACCATGGAAGCCCAAATATTTTATCCAGGA...AGCACTGTGACTAAAACATACATAACGCCTGCATAAATATTCCATGGTTTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR CAA 90 bp AAATCTTTAACAGCTTCCTGCCAACCCCCATCCAGCAGGAAATACTTGCTTATCTTACCCACTTTAACCTaGGTGAGTGCAGTATTTAAA +
Preference number: 5 (lower is better)
Translates to: KSLTASCQPPSSRKYLLILPTLT*VSAVFK
Trigger: TTTAAATACTGCACTCACCAAGGTTAAAGTGGGTAA...GATAAGCAAGTATTTCCTGCTGGATGGGGGTTGGCAGGAAGCTGTTAAAGATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR CAA 90 bp CTGGTCTTAAGAAAGCAGACAAAAGGCACAAAATTAGTATTACTACAGAGAAGCAAACAATGGTGTTGGTaGGGTTGTGCTTCACTTCTG +
Preference number: 5 (lower is better)
Translates to: LVLRKQTKGTKLVLLQRSKQWCW*GCASLL
Trigger: CAGAAGTGAAGCACAACCCAACCAACACCATTGTTT...GCTTCTCTGTAGTAATACTAATTTTGTGCCTTTTGTCTGCTTTCTTAAGACCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR CAA 90 bp TCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGTGAATGCCAACAAAACTGCCCCGAATGGCTCTaGAATAAATTCATTCCTCTA +
Preference number: 5 (lower is better)
Translates to: SLIISWMLIQGLSECQQNCPEWL*NKFIPL
Trigger: TAGAGGAATGAATTTATTCAAGAGCCATTCGGGGCA...GTTTTGTTGGCATTCACTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR CAA 90 bp TTACCCACTTTAACCTTGGTGAGTGCAGTATTTAAATGTGTAATCATACTCAGAACTTGCTTATCTTTCTaGGGCGCGGACAGACAAAAC +
Preference number: 5 (lower is better)
Translates to: LPTLTLVSAVFKCVIILRTCLSF*GADRQN
Trigger: GTTTTGTCTGTCCGCGCCCAAGAAAGATAAGCAAGT...TCTGAGTATGATTACACATTTAAATACTGCACTCACCAAGGTTAAAGTGGGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR CAA 90 bp CTGGTCTTAAGAAAGCAGACAAAAGGCACAAAATTAGTATTACTACAGAGAAGCGAGAAATTGGATCCCTaGTGCATTGCTAGTGGCATT +
Preference number: 5 (lower is better)
Translates to: LVLRKQTKGTKLVLLQRSEKLDP*CIASGI
Trigger: AATGCCACTAGCAATGCACAAGGGATCCAATTTCTC...GCTTCTCTGTAGTAATACTAATTTTGTGCCTTTTGTCTGCTTTCTTAAGACCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR CAA 90 bp GTATATAATTTCTCTCTCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGCTGAGTCACCCAGAATaGTTTCTCTTTTGCATCAGC +
Preference number: 5 (lower is better)
Translates to: VYNFSLSHHFLDANTRSQLSHPE*FLFCIS
Trigger: GCTGATGCAAAAGAGAAACAATTCTGGGTGACTCAG...CTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGAGAGAGAAATTATATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000438237.6
CDS-3UTR CAA 90 bp ATACTCTACTACTTTAATATTCCTACAAAAACAGGGCTATACTGGAAAGCTCTGCTGAGTCACCCAGAATaGTTTCTCTTTTGCATCAGC +
Preference number: 5 (lower is better)
Translates to: ILYYFNIPTKTGLYWKALLSHPE*FLFCIS
Trigger: GCTGATGCAAAAGAGAAACAATTCTGGGTGACTCAG...CAGAGCTTTCCAGTATAGCCCTGTTTTTGTAGGAATATTAAAGTAGTAGAGTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000438237.6
CDS-3UTR CAA 90 bp ATACTCTACTACTTTAATATTCCTACAAAAACAGGGCTATACTGGAAAGCTCTGCAGAGTTTGGTAAAATaGCCCAGGTTATGTTGGCAC +
Preference number: 5 (lower is better)
Translates to: ILYYFNIPTKTGLYWKALQSLVK*PRLCWH
Trigger: GTGCCAACATAACCTGGGCAATTTTACCAAACTCTG...CAGAGCTTTCCAGTATAGCCCTGTTTTTGTAGGAATATTAAAGTAGTAGAGTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR CAA 90 bp TTACCCACTTTAACCTTGGTGAGTGCAGTATTTAAATGTGTAATCATACTCAGAAAACAATGGTGTTGGTaGGGTTGTGCTTCACTTCTG +
Preference number: 5 (lower is better)
Translates to: LPTLTLVSAVFKCVIILRKQWCW*GCASLL
Trigger: CAGAAGTGAAGCACAACCCAACCAACACCATTGTTT...TCTGAGTATGATTACACATTTAAATACTGCACTCACCAAGGTTAAAGTGGGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR CAA 90 bp CTGGTCTTAAGAAAGCAGACAAAAGGCACAAAATTAGTATTACTACAGAGAAGCTTACAAACAATGGTGTaGGTTGGGTTGTGCTTCACT +
Preference number: 5 (lower is better)
Translates to: LVLRKQTKGTKLVLLQRSLQTMV*VGLCFT
Trigger: AGTGAAGCACAACCCAACCAACACCATTGTTTGTAA...GCTTCTCTGTAGTAATACTAATTTTGTGCCTTTTGTCTGCTTTCTTAAGACCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR CAA 90 bp TCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGTGAATGCCAACAAAACCTCTCTCATCATTTCTaGGATGCTAATACAAGGTCT +
Preference number: 5 (lower is better)
Translates to: SLIISWMLIQGLSECQQNLSHHF*DANTRS
Trigger: AGACCTTGTATTAGCATCCAAGAAATGATGAGAGAG...GTTTTGTTGGCATTCACTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR CAA 90 bp CTGGTCTTAAGAAAGCAGACAAAAGGCACAAAATTAGTATTACTACAGAGAAGCATTTTCGTCACTCCTTaGACCTCATGTGTAAAGGCT +
Preference number: 5 (lower is better)
Translates to: LVLRKQTKGTKLVLLQRSIFVTP*TSCVKA
Trigger: AGCCTTTACACATGAGGTCAAAGGAGTGACGAAAAT...GCTTCTCTGTAGTAATACTAATTTTGTGCCTTTTGTCTGCTTTCTTAAGACCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR CAA 90 bp TTACCCACTTTAACCTTGGTGAGTGCAGTATTTAAATGTGTAATCATACTCAGATTACAAACAATGGTGTaGGTTGGGTTGTGCTTCACT +
Preference number: 5 (lower is better)
Translates to: LPTLTLVSAVFKCVIILRLQTMV*VGLCFT
Trigger: AGTGAAGCACAACCCAACCAACACCATTGTTTGTAA...TCTGAGTATGATTACACATTTAAATACTGCACTCACCAAGGTTAAAGTGGGTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR CAA 90 bp TCTCTCATCATTTCTTGGATGCTAATACAAGGTCTCAGTGAATGCCAACAAAACTTACCCACTTTAACCTaGGTGAGTGCAGTATTTAAA +
Preference number: 5 (lower is better)
Translates to: SLIISWMLIQGLSECQQNLPTLT*VSAVFK
Trigger: TTTAAATACTGCACTCACCAAGGTTAAAGTGGGTAA...GTTTTGTTGGCATTCACTGAGACCTTGTATTAGCATCCAAGAAATGATGAGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR CAA 90 bp ATACTCTACTACTTTAATATTCCTACAAAAACAGGGCTATACTGGAAAGCTCTGATTTTCGTCACTCCTTaGACCTCATGTGTAAAGGCT +
Preference number: 5 (lower is better)
Translates to: ILYYFNIPTKTGLYWKALIFVTP*TSCVKA
Trigger: AGCCTTTACACATGAGGTCAAAGGAGTGACGAAAAT...CAGAGCTTTCCAGTATAGCCCTGTTTTTGTAGGAATATTAAAGTAGTAGAGTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR CAA 90 bp GTTAAGACAATGCTACTCAAAGGGATCTACAGATTCAATGCAATCCCTATCAAAGCCCACAGATACATTTaGATTGCCTACTGGTATTTA +
Preference number: 5 (lower is better)
Translates to: VKTMLLKGIYRFNAIPIKAHRYI*IAYWYL
Trigger: TAAATACCAGTAGGCAATCAAAATGTATCTGTGGGC...TTTGATAGGGATTGCATTGAATCTGTAGATCCCTTTGAGTAGCATTGTCTTAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR CAA 90 bp TTACCCACTTTAACCTTGGTGAGTGCAGTATTTAAATGTGTAATCATACTCAGAGATGGTTCCAGATACTaGATTCACCCAGATGCTTTA +
Preference number: 5 (lower is better)
Translates to: LPTLTLVSAVFKCVIILRDGSRY*IHPDAL
Trigger: TAAAGCATCTGGGTGAATCAAGTATCTGGAACCATC...TCTGAGTATGATTACACATTTAAATACTGCACTCACCAAGGTTAAAGTGGGTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR CAA 90 bp GTTAAGACAATGCTACTCAAAGGGATCTACAGATTCAATGCAATCCCTATCAAATGCAAAAGAATGAAGTaGGACCCTTATCTAACACCA +
Preference number: 5 (lower is better)
Translates to: VKTMLLKGIYRFNAIPIKCKRMK*DPYLTP
Trigger: TGGTGTTAGATAAGGGTCCAACTTCATTCTTTTGCA...TTTGATAGGGATTGCATTGAATCTGTAGATCCCTTTGAGTAGCATTGTCTTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS-3UTR CAA 90 bp TTACCCACTTTAACCTTGGTGAGTGCAGTATTTAAATGTGTAATCATACTCAGACTTCTGGTGTTTGCTTaGCTCATTCACAAAATACTG +
Preference number: 5 (lower is better)
Translates to: LPTLTLVSAVFKCVIILRLLVFA*LIHKIL
Trigger: CAGTATTTTGTGAATGAGCAAAGCAAACACCAGAAG...TCTGAGTATGATTACACATTTAAATACTGCACTCACCAAGGTTAAAGTGGGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000438237.6
CDS-3UTR CAA 90 bp TTACCCACTTTAACCTTGGTGAGTGCAGTATTTAAATGTGTAATCATACTCAGACTCTCTCATCATTTCTaGGATGCTAATACAAGGTCT +
Preference number: 5 (lower is better)
Translates to: LPTLTLVSAVFKCVIILRLSHHF*DANTRS
Trigger: AGACCTTGTATTAGCATCCAAGAAATGATGAGAGAG...TCTGAGTATGATTACACATTTAAATACTGCACTCACCAAGGTTAAAGTGGGTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS-3UTR CAA 90 bp ATACTCTACTACTTTAATATTCCTACAAAAACAGGGCTATACTGGAAAGCTCTGAAACTAAATACAAGATaGAGGCTGTGGTTGTGCATG +
Preference number: 5 (lower is better)
Translates to: ILYYFNIPTKTGLYWKALKLNTR*RLWLCM
Trigger: CATGCACAACCACAGCCTCAATCTTGTATTTAGTTT...CAGAGCTTTCCAGTATAGCCCTGTTTTTGTAGGAATATTAAAGTAGTAGAGTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000429492.6
CDS-3UTR CAA 90 bp TTACCCACTTTAACCTTGGTGAGTGCAGTATTTAAATGTGTAATCATACTCAGATTACCCACTTTAACCTaGGTGAGTGCAGTATTTAAA +
Preference number: 5 (lower is better)
Translates to: LPTLTLVSAVFKCVIILRLPTLT*VSAVFK
Trigger: TTTAAATACTGCACTCACCAAGGTTAAAGTGGGTAA...TCTGAGTATGATTACACATTTAAATACTGCACTCACCAAGGTTAAAGTGGGTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS GCA 72 bp GCTGTTGCTACCCCCGCCGCCGTCTGTGCCCTGGACTaGCCTCTCCATGGTCCGTGGGCGCCCGGGACGCGG +
Preference number: 6 (lower is better)
Translates to: AVATPAAVCALD*PLHGPWAPGTR
Trigger: CCGCGTCCCGGGCGCCCACGGACCATGGAGAGGGCAGTCCAGGGCACAGACGGCGGCGGGGGTAGCAACAGC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000438237.6
ENST00000452791.1
CDS TCA 72 bp GGCAAGAGCCTCTCCCCGCATCTGCCCACAGCGGGATaGGGGAGGAGGCGCCGCTGTCGGTCCACACCATGG +
Preference number: 6 (lower is better)
Translates to: GKSLSPHLPTAG*GRRRRCRSTPW
Trigger: CCATGGTGTGGACCGACAGCGGCGCCTCCTCCCTCATCCCGCTGTGGGCAGATGCGGGGAGAGGCTCTTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673388.1
CDS TCA 72 bp TGTTCTGCCAGCCCTGGAGGAGGTTGGTGTATTTGCTaGGCACGCCCTCGAGCGCCGGCTCCCTCCTGCGGC +
Preference number: 6 (lower is better)
Translates to: CSASPGGGWCIC*ARPRAPAPSCG
Trigger: GCCGCAGGAGGGAGCCGGCGCTCGAGGGCGTGCTCAGCAAATACACCAACCTCCTCCAGGGCTGGCAGAACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000438237.6
ENST00000452791.1
CDS GCA 72 bp ATGGAGAGGAAACCGGCAAGAGCCTCTCCCCGCATCTaGCCACAGCGGGATGAGGGAGGAGGCGCCGCTGTC +
Preference number: 6 (lower is better)
Translates to: MERKPARASPRI*PQRDEGGGAAV
Trigger: GACAGCGGCGCCTCCTCCCTCATCCCGCTGTGGGCAGATGCGGGGAGAGGCTCTTGCCGGTTTCCTCTCCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673388.1
CDS GCA 72 bp CGCTTCCGTTCCTCCACCCGTTGCTTCTCCTCCAGGTaGCGCTTCTGCTCGGTGGCTGCGTCAATGTCCCCC +
Preference number: 6 (lower is better)
Translates to: RFRSSTRCFSSR*RFCSVAASMSP
Trigger: GGGGGACATTGACGCAGCCACCGAGCAGAAGCGGCACCTGGAGGAGAAGCAACGGGTGGAGGAACGGAAGCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
ENST00000469557.1
CDS CCA 72 bp GGGCTGCAGCTCAATGCCCAAGAGGAGTGTTGGCCATaGCCCCACAGATCCCGGCCTGGCTCAGGAGCATGC +
Preference number: 6 (lower is better)
Translates to: GLQLNAQEECWP*PHRSRPGSGAC
Trigger: GCATGCTCCTGAGCCAGGCCGGGATCTGTGGGGCCATGGCCAACACTCCTCTTGGGCATTGAGCTGCAGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467647.1
CDS CAA 72 bp CAGCTGTTCTGCCAGCCCTGGAGGAGGTTGGTGTATTaGCTGAGCACGCCCTCGAGCGCCGGCTCCCTCCTG +
Preference number: 6 (lower is better)
Translates to: QLFCQPWRRLVY*LSTPSSAGSLL
Trigger: CAGGAGGGAGCCGGCGCTCGAGGGCGTGCTCAGCAAATACACCAACCTCCTCCAGGGCTGGCAGAACAGCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452791.1
CDS CAA 90 bp AGTACGAAGTACCTGTTCTGCCAGCCCTGGAGGAGGTTGGTGTATTaGCTGAGCACGCCCTCGAGCGCCGGCTCCCTCCTGCGGCCGCCT +
Preference number: 6 (lower is better)
Translates to: STKYLFCQPWRRLVY*LSTPSSAGSLLRPP
Trigger: AGGCGGCCGCAGGAGGGAGCCGGCGCTCGAGGGCGTGCTCAGCAAATACACCAACCTCCTCCAGGGCTGGCAGAACAGGTACTTCGTACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000438237.6
CDS GCA 72 bp GTGAGGGGGCCGGACCCTGGCAGGGACTCAATGGCGTaGACAAGGTTCTTCTGCTGCCCTTCCACCTGGTTC +
Preference number: 6 (lower is better)
Translates to: VRGPDPGRDSMA*TRFFCCPSTWF
Trigger: GAACCAGGTGGAAGGGCAGCAGAAGAACCTTGTGCACGCCATTGAGTCCCTGCCAGGGTCCGGCCCCCTCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000396556.7
ENST00000428241.1
ENST00000429492.6
ENST00000438237.6
ENST00000467647.1
ENST00000467955.5
ENST00000480671.5
ENST00000485205.5
ENST00000673388.1
CDS GCA 72 bp GGCTTCTGGCTGGGCTGGCCCGCCTGGTGCACACTCTaGTGTAACAAGTTGAGGCACTCCCCAAGGCAGCTG +
Preference number: 6 (lower is better)
Translates to: GFWLGWPAWCTL*CNKLRHSPRQL
Trigger: CAGCTGCCTTGGGGAGTGCCTCAACTTGTTACAGCAGAGTGTGCACCAGGCGGGCCAGCCCAGCCAGAAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396556.7
ENST00000428241.1
ENST00000429492.6
ENST00000438237.6
ENST00000467647.1
ENST00000673388.1
CDS CCA 72 bp TCCGAGGCTCCTGGCTTCTGGCTGGGCTGGCCCGCCTaGTGCACACTCTGCTGTAACAAGTTGAGGCACTCC +
Preference number: 6 (lower is better)
Translates to: SEAPGFWLGWPA*CTLCCNKLRHS
Trigger: GGAGTGCCTCAACTTGTTACAGCAGAGTGTGCACCAGGCGGGCCAGCCCAGCCAGAAGCCAGGAGCCTCGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000396556.7
ENST00000428241.1
ENST00000429492.6
ENST00000438237.6
ENST00000467647.1
ENST00000673388.1
CDS CCA 72 bp GAACCTGGGCTGCAGCTCAATGCCCAAGAGGAGTGTTaGCCATGGCCCCACAGATCCCGGCCTGGCTCAGGA +
Preference number: 6 (lower is better)
Translates to: EPGLQLNAQEEC*PWPHRSRPGSG
Trigger: TCCTGAGCCAGGCCGGGATCTGTGGGGCCATGGCCAACACTCCTCTTGGGCATTGAGCTGCAGCCCAGGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467647.1
CDS CCA 72 bp TCGGGTCACCTCCCGCCAGAGGTTCCTGGGGATGCGTaGAGGAGAGGAAACAATCAGCCAGGCCAGCTGGCT +
Preference number: 6 (lower is better)
Translates to: SGHLPPEVPGDA*RRGNNQPGQLA
Trigger: AGCCAGCTGGCCTGGCTGATTGTTTCCTCTCCTCCACGCATCCCCAGGAACCTCTGGCGGGAGGTGACCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469557.1
CDS CCA 72 bp GCCGCAGGTATCGGGTCACCTCCCGCCAGAGGTTCCTaGGGATGCGTGGAGGAGAGGAAACAATCAGCCAGG +
Preference number: 6 (lower is better)
Translates to: AAGIGSPPARGS*GCVEERKQSAR
Trigger: CCTGGCTGATTGTTTCCTCTCCTCCACGCATCCCCAGGAACCTCTGGCGGGAGGTGACCCGATACCTGCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469557.1
CDS CAA 72 bp TACCTGTTCTGCCAGCCCTGGAGGAGGTTGGTGTATTaGCTGAGCACGCCCTCGAGCGCCGGCTCCCTCCTG +
Preference number: 6 (lower is better)
Translates to: YLFCQPWRRLVY*LSTPSSAGSLL
Trigger: CAGGAGGGAGCCGGCGCTCGAGGGCGTGCTCAGCAAATACACCAACCTCCTCCAGGGCTGGCAGAACAGGTA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000438237.6
CDS CAA 90 bp TTCTGGCTGGGCTGGCCCGCCTGGTGCACACTCTGCTGTAACAAGTaGAGGCACTCCCCAAGGCAGCTGAGGGTGGCAGCAGAGGTAGCT +
Preference number: 6 (lower is better)
Translates to: FWLGWPAWCTLCCNK*RHSPRQLRVAAEVA
Trigger: AGCTACCTCTGCTGCCACCCTCAGCTGCCTTGGGGAGTGCCTCAACTTGTTACAGCAGAGTGTGCACCAGGCGGGCCAGCCCAGCCAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396556.7
ENST00000428241.1
ENST00000429492.6
ENST00000438237.6
ENST00000467647.1
ENST00000673388.1
CDS CAA 90 bp CTTCCATGGTGTGCGGAGGTTCTCGCGCTTCCGTTCCTCCACCCGTaGCTTCTCCTCCAGGTGCCGCTTCTGCTCGGTGGCTGCGTCAAT +
Preference number: 6 (lower is better)
Translates to: LPWCAEVLALPFLHP*LLLQVPLLLGGCVN
Trigger: ATTGACGCAGCCACCGAGCAGAAGCGGCACCTGGAGGAGAAGCAACGGGTGGAGGAACGGAAGCGCGAGAACCTCCGCACACCATGGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
ENST00000469557.1
CDS GCA 72 bp CAGCTGGTGTCTGGTATAGCTGGTACCCCTTGGCCCTaGTGCAGGGCGGCTGTTGAAGGCTCCTGCACACGT +
Preference number: 6 (lower is better)
Translates to: QLVSGIAGTPWP*CRAAVEGSCTR
Trigger: ACGTGTGCAGGAGCCTTCAACAGCCGCCCTGCAGCAGGGCCAAGGGGTACCAGCTATACCAGACACCAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490009.1
CDS TCA 72 bp GCTCTCCTGACGAGGCAGTGCATATCCTCGGCAGCCTaGACCTGGGCTGCAGCTCAATGCCCAAGAGGAGTG +
Preference number: 6 (lower is better)
Translates to: ALLTRQCISSAA*TWAAAQCPRGV
Trigger: CACTCCTCTTGGGCATTGAGCTGCAGCCCAGGTTCAGGCTGCCGAGGATATGCACTGCCTCGTCAGGAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467647.1
CDS GCA 72 bp CCATGGCCCCACAGATCCCGGCCTGGCTCAGGAGCATaGAGGAGTCGAGCATGTGAGGCAAGAGCTTGTATC +
Preference number: 6 (lower is better)
Translates to: PWPHRSRPGSGA*RSRACEARACI
Trigger: GATACAAGCTCTTGCCTCACATGCTCGACTCCTGCATGCTCCTGAGCCAGGCCGGGATCTGTGGGGCCATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467647.1
CDS GCA 72 bp GAGGCAGTGCATATCCTCGGCAGCCTGAACCTGGGCTaGAGCTCAATGCCCAAGAGGAGTGTTGGCCATGGC +
Preference number: 6 (lower is better)
Translates to: EAVHILGSLNLG*SSMPKRSVGHG
Trigger: GCCATGGCCAACACTCCTCTTGGGCATTGAGCTGCAGCCCAGGTTCAGGCTGCCGAGGATATGCACTGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467647.1
CDS CCA 72 bp ATCCCAGGATGTTTTCCGAGGCTCCTGGCTTCTGGCTaGGCTGGCCCGCCTGGTGCACACTCTGCTGTAACA +
Preference number: 6 (lower is better)
Translates to: IPGCFPRLLASG*AGPPGAHSAVT
Trigger: TGTTACAGCAGAGTGTGCACCAGGCGGGCCAGCCCAGCCAGAAGCCAGGAGCCTCGGAAAACATCCTGGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396556.7
ENST00000428241.1
ENST00000429492.6
ENST00000438237.6
ENST00000467647.1
ENST00000673388.1
CDS CAA 90 bp TCGAAATCCAGTACGAAGTACCTGTTCTGCCAGCCCTGGAGGAGGTaGGTGTATTTGCTGAGCACGCCCTCGAGCGCCGGCTCCCTCCTG +
Preference number: 6 (lower is better)
Translates to: SKSSTKYLFCQPWRR*VYLLSTPSSAGSLL
Trigger: CAGGAGGGAGCCGGCGCTCGAGGGCGTGCTCAGCAAATACACCAACCTCCTCCAGGGCTGGCAGAACAGGTACTTCGTACTGGATTTCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000438237.6
CDS GCA 72 bp CCTTGGCCCTGCTGCAGGGCGGCTGTTGAAGGCTCCTaGACACGTACTATCCTCTACATGGAGCCACTTCCA +
Preference number: 6 (lower is better)
Translates to: PWPCCRAAVEGS*TRTILYMEPLP
Trigger: TGGAAGTGGCTCCATGTAGAGGATAGTACGTGTGCAGGAGCCTTCAACAGCCGCCCTGCAGCAGGGCCAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490009.1
CDS CCA 72 bp GTGACAACACCGGGGGCCCCCACACTGAGGTGTCTCTaGCTACAGGGAGACGCAGAATTGGGTGTTCCATGT +
Preference number: 6 (lower is better)
Translates to: VTTPGAPTLRCL*LQGDAELGVPC
Trigger: ACATGGAACACCCAATTCTGCGTCTCCCTGTAGCCAGAGACACCTCAGTGTGGGGGCCCCCGGTGTTGTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000396556.7
ENST00000466604.5
ENST00000467955.5
ENST00000485205.5
CDS CCA 72 bp ATGCGTGGAGGAGAGGAAACAATCAGCCAGGCCAGCTaGCTGCAAGCTAACGGAACTCTGCCAGGAGCAGCC +
Preference number: 6 (lower is better)
Translates to: MRGGEETISQAS*LQANGTLPGAA
Trigger: GGCTGCTCCTGGCAGAGTTCCGTTAGCTTGCAGCCAGCTGGCCTGGCTGATTGTTTCCTCTCCTCCACGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469557.1
CDS CAA 90 bp CCCAGGGCTACCCAGCTCCACCTCTGTGTTGTTTCTACTCTCCGCTaGTACCAGGCAGCATGCCTTTCTCAGGGCCCGGAGATTCTGGGA +
Preference number: 6 (lower is better)
Translates to: PRATQLHLCVVSTLR*YQAACLSQGPEILG
Trigger: TCCCAGAATCTCCGGGCCCTGAGAAAGGCATGCTGCCTGGTACAAGCGGAGAGTAGAAACAACACAGAGGTGGAGCTGGGTAGCCCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469557.1
CDS TCA 72 bp CTGGCTGATCACCAGGATCTGCAAGGACTGCTCTCCTaGCGAGGCAGTGCATATCCTCGGCAGCCTGAACCT +
Preference number: 6 (lower is better)
Translates to: LADHQDLQGLLS*RGSAYPRQPEP
Trigger: AGGTTCAGGCTGCCGAGGATATGCACTGCCTCGTCAGGAGAGCAGTCCTTGCAGATCCTGGTGATCAGCCAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467647.1
CDS GCA 72 bp CTGGCCGGAATACTGACTCTTGGCTCTTCGGGCGGCTaGAGGCGACTTGTGATGCGTGATTGTGACAACACC +
Preference number: 6 (lower is better)
Translates to: LAGILTLGSSGG*RRLVMRDCDNT
Trigger: GGTGTTGTCACAATCACGCATCACAAGTCGCCTGCAGCCGCCCGAAGAGCCAAGAGTCAGTATTCCGGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396556.7
ENST00000466604.5
ENST00000467647.1
ENST00000467955.5
ENST00000485205.5
CDS CAA 72 bp ACCCAGCTCCACCTCTGTGTTGTTTCTACTCTCCGCTaGTACCAGGCAGCATGCCTTTCTCAGGGCCCGGAG +
Preference number: 6 (lower is better)
Translates to: TQLHLCVVSTLR*YQAACLSQGPE
Trigger: CTCCGGGCCCTGAGAAAGGCATGCTGCCTGGTACAAGCGGAGAGTAGAAACAACACAGAGGTGGAGCTGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469557.1
CDS CCA 72 bp CTGGCTACAGGGAGACGCAGAATTGGGTGTTCCATGTaGGAGCAAAGTGAGACTTCGGCTTCGGGAGCTTGG +
Preference number: 6 (lower is better)
Translates to: LATGRRRIGCSM*EQSETSASGAW
Trigger: CCAAGCTCCCGAAGCCGAAGTCTCACTTTGCTCCCACATGGAACACCCAATTCTGCGTCTCCCTGTAGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396556.7
ENST00000466604.5
ENST00000467955.5
ENST00000485205.5
CDS CAA 90 bp TGTGGGACCCTCTCCATGACGTTAGTGGTCAGGACACTGGTTCTGTaGGTGAGGTTCCTCAGGAAGCATCCTGCCTGCACTCAGCACCAA +
Preference number: 6 (lower is better)
Translates to: CGTLSMTLVVRTLVL*VRFLRKHPACTQHQ
Trigger: TTGGTGCTGAGTGCAGGCAGGATGCTTCCTGAGGAACCTCACCAACAGAACCAGTGTCCTGACCACTAACGTCATGGAGAGGGTCCCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479396.1
CDS TCA 72 bp AATTGGGAGCCAGGCGCCAGGGGAGAGGCCGTTTCCTaGTGGTCCACACCTGTTGCAGTAAAGTGTGATTTG +
Preference number: 6 (lower is better)
Translates to: NWEPGARGEAVS*WSTPVAVKCDL
Trigger: CAAATCACACTTTACTGCAACAGGTGTGGACCATCAGGAAACGGCCTCTCCCCTGGCGCCTGGCTCCCAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479173.1
CDS GCA 72 bp GGCAGGGACTCAATGGCGTGCACAAGGTTCTTCTGCTaGCCTTCCACCTGGTTCATCATCTCTCTGACTTCG +
Preference number: 6 (lower is better)
Translates to: GRDSMACTRFFC*PSTWFIISLTS
Trigger: CGAAGTCAGAGAGATGATGAACCAGGTGGAAGGGCAGCAGAAGAACCTTGTGCACGCCATTGAGTCCCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000467647.1
ENST00000467955.5
ENST00000485205.5
CDS GCA 72 bp CCTGGCAGGGACTCAATGGCGTGCACAAGGTTCTTCTaGTGCCCTTCCACCTGGTTCATCATCTCTCTGACT +
Preference number: 6 (lower is better)
Translates to: PGRDSMACTRFF*CPSTWFIISLT
Trigger: AGTCAGAGAGATGATGAACCAGGTGGAAGGGCAGCAGAAGAACCTTGTGCACGCCATTGAGTCCCTGCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000467647.1
ENST00000467955.5
ENST00000485205.5
CDS GCA 72 bp ACCTCCCGCCAGAGGTTCCTGGACTCCATGGGTCCCTaGTTCTCAAGAGGTCTGATCTTCTTGGGATACACT +
Preference number: 6 (lower is better)
Translates to: TSRQRFLDSMGP*FSRGLIFLGYT
Trigger: AGTGTATCCCAAGAAGATCAGACCTCTTGAGAAGCAGGGACCCATGGAGTCCAGGAACCTCTGGCGGGAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS GCA 72 bp ATGAAGCCTGTTGGAGCCTGGCTGATCACCAGGATCTaGAAGGACTGCTCTCCTGACGAGGCAGTGCATATC +
Preference number: 6 (lower is better)
Translates to: MKPVGAWLITRI*KDCSPDEAVHI
Trigger: GATATGCACTGCCTCGTCAGGAGAGCAGTCCTTGCAGATCCTGGTGATCAGCCAGGCTCCAACAGGCTTCAT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467647.1
CDS CCA 72 bp TCGAAATCCAGTACGAAGTACCTGTTCTGCCAGCCCTaGAGGAGGTTGGTGTATTTGCTGAGCACGCCCTCG +
Preference number: 6 (lower is better)
Translates to: SKSSTKYLFCQP*RRLVYLLSTPS
Trigger: CGAGGGCGTGCTCAGCAAATACACCAACCTCCTCCAGGGCTGGCAGAACAGGTACTTCGTACTGGATTTCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396556.7
ENST00000438237.6
CDS CCA 72 bp CCAGCATGTGGGGAGCTTCATCGCTCAGGGACACTATaGCTCCAGATAAAGACAGGACTCCTCGAGGCTTCT +
Preference number: 6 (lower is better)
Translates to: PACGELHRSGTL*LQIKTGLLEAS
Trigger: AGAAGCCTCGAGGAGTCCTGTCTTTATCTGGAGCCATAGTGTCCCTGAGCGATGAAGCTCCCCACATGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396556.7
ENST00000438237.6
ENST00000463504.5
ENST00000465626.1
ENST00000466604.5
ENST00000467955.5
ENST00000479173.1
ENST00000480671.5
CDS CCA 72 bp GTTTCTCTTTTGCATCAGCAGCTGTTCTGCCAGCCCTaGAGGAGGTTGGTGTATTTGCTGAGCACGCCCTCG +
Preference number: 6 (lower is better)
Translates to: VSLLHQQLFCQP*RRLVYLLSTPS
Trigger: CGAGGGCGTGCTCAGCAAATACACCAACCTCCTCCAGGGCTGGCAGAACAGCTGCTGATGCAAAAGAGAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452791.1
CDS CAA 90 bp CAGCCACAAACCTTAGTTTGTAGCTTTTGGAAGGGTCATCGGCCATaGGGTGTTCGTGACAGCTGGCAGGAGAGCGGGAAGCAGTCCTCT +
Preference number: 6 (lower is better)
Translates to: QPQTLVCSFWKGHRP*GVRDSWQESGKQSS
Trigger: AGAGGACTGCTTCCCGCTCTCCTGCCAGCTGTCACGAACACCCAATGGCCGATGACCCTTCCAAAAGCTACAAACTAAGGTTTGTGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
ENST00000673388.1
CDS CAA 90 bp AAGGGACCAATGACAGGCGGCAGAGTTACCTCCTGGATAAAATATTaGGGCTTCCATGGTGTGCGGAGGTTCTCGCGCTTCCGTTCCTCC +
Preference number: 6 (lower is better)
Translates to: KGPMTGGRVTSWIKY*GFHGVRRFSRFRSS
Trigger: GGAGGAACGGAAGCGCGAGAACCTCCGCACACCATGGAAGCCCAAATATTTTATCCAGGAGGTAACTCTGCCGCCTGTCATTGGTCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS CAA 90 bp GGGGTAGCTCATCCCAGATACCTCAAAGACCCCGAGAGCCTAGATTaGAACCCAGGGCTACCCAGCTCCACCTCTGTGTTGTTTCTACTC +
Preference number: 6 (lower is better)
Translates to: GVAHPRYLKDPESLD*NPGLPSSTSVLFLL
Trigger: GAGTAGAAACAACACAGAGGTGGAGCTGGGTAGCCCTGGGTTCAAATCTAGGCTCTCGGGGTCTTTGAGGTATCTGGGATGAGCTACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469557.1
CDS GCA 72 bp CCTGGCAGGGACTCAATGGCGTGCACAAGGTTCTTCTaGTGCCCTTCCACCTGGTTCATCATCTTTGATGAG +
Preference number: 6 (lower is better)
Translates to: PGRDSMACTRFF*CPSTWFIIFDE
Trigger: CTCATCAAAGATGATGAACCAGGTGGAAGGGCAGCAGAAGAACCTTGTGCACGCCATTGAGTCCCTGCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673388.1
CDS CCA 72 bp CTGTTGAAGGCTCCTGCACACGTACTATCCTCTACATaGAGCCACTTCCAAAGCCAGGCAACCAACTGTGCC +
Preference number: 6 (lower is better)
Translates to: LLKAPAHVLSST*SHFQSQATNCA
Trigger: GGCACAGTTGGTTGCCTGGCTTTGGAAGTGGCTCCATGTAGAGGATAGTACGTGTGCAGGAGCCTTCAACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490009.1
CDS CAA 72 bp ACACTGAGGTGTCTCTGGCTACAGGGAGACGCAGAATaGGGTGTTCCATGTGGGAGCAAAGTGAGACTTCGG +
Preference number: 6 (lower is better)
Translates to: TLRCLWLQGDAE*GVPCGSKVRLR
Trigger: CCGAAGTCTCACTTTGCTCCCACATGGAACACCCAATTCTGCGTCTCCCTGTAGCCAGAGACACCTCAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396556.7
ENST00000466604.5
ENST00000467955.5
ENST00000485205.5
CDS CAA 72 bp ACCTTAGTTTGTAGCTTTTGGAAGGGTCATCGGCCATaGGGTGTTCGTGACAGCTGGCAGGAGAGCGGGAAG +
Preference number: 6 (lower is better)
Translates to: TLVCSFWKGHRP*GVRDSWQESGK
Trigger: CTTCCCGCTCTCCTGCCAGCTGTCACGAACACCCAATGGCCGATGACCCTTCCAAAAGCTACAAACTAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
ENST00000673388.1
CDS CAA 72 bp AATATCACTGTCGCTGAGTACCCAGTCTTGGCACAGTaGATGCTGACTTTTCCTCCGAGCTCCACCCACGGG +
Preference number: 6 (lower is better)
Translates to: NITVAEYPVLAQ*MLTFPPSSTHG
Trigger: CCCGTGGGTGGAGCTCGGAGGAAAAGTCAGCATCAACTGTGCCAAGACTGGGTACTCAGCGACAGTGATATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS CAA 90 bp AAAGAGCCAAGTGTCCCATTTTTCAGCTGCTCTGTGGAATGTGACTaGGACCCGTGCCATCCCAGGATGTTTTCCGAGGCTCCTGGCTTC +
Preference number: 6 (lower is better)
Translates to: KEPSVPFFSCSVECD*DPCHPRMFSEAPGF
Trigger: GAAGCCAGGAGCCTCGGAAAACATCCTGGGATGGCACGGGTCCAAGTCACATTCCACAGAGCAGCTGAAAAATGGGACACTTGGCTCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000396556.7
ENST00000428241.1
ENST00000429492.6
ENST00000438237.6
ENST00000467647.1
ENST00000673388.1
CDS CAA 90 bp TTCGTGTGGAATATCACTGTCGCTGAGTACCCAGTCTTGGCACAGTaGATGCTGACTTTTCCTCCGAGCTCCACCCACGGGATGGTGAGA +
Preference number: 6 (lower is better)
Translates to: FVWNITVAEYPVLAQ*MLTFPPSSTHGMVR
Trigger: TCTCACCATCCCGTGGGTGGAGCTCGGAGGAAAAGTCAGCATCAACTGTGCCAAGACTGGGTACTCAGCGACAGTGATATTCCACACGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS CAA 90 bp CCAACTGTGCCTCAAAGGCCACCGGCGAATTTAGGGGACCTTATCTaGCCATTTGGAGGTAGATTCAACAACGAGGCCACTGTGAGGGGA +
Preference number: 6 (lower is better)
Translates to: PTVPQRPPANLGDLI*PFGGRFNNEATVRG
Trigger: TCCCCTCACAGTGGCCTCGTTGTTGAATCTACCTCCAAATGGCAAGATAAGGTCCCCTAAATTCGCCGGTGGCCTTTGAGGCACAGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490009.1
CDS TCA 72 bp GGATGCCAGCCTCGAAATCCAGTACGAAGTACTGAATaGGGCTCAAGGCATCTCACAGGAGCCAAGGAAGGT +
Preference number: 6 (lower is better)
Translates to: GCQPRNPVRSTE*GSRHLTGAKEG
Trigger: ACCTTCCTTGGCTCCTGTGAGATGCCTTGAGCCTCATTCAGTACTTCGTACTGGATTTCGAGGCTGGCATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467955.5
CDS GCA 72 bp CCTGGCAGGGACTCAATGGCGTGCACAAGGTTCTTCTaGTGCCCTTCCACCTGGTTCATCATCTTAGAATTC +
Preference number: 6 (lower is better)
Translates to: PGRDSMACTRFF*CPSTWFIILEF
Trigger: GAATTCTAAGATGATGAACCAGGTGGAAGGGCAGCAGAAGAACCTTGTGCACGCCATTGAGTCCCTGCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438237.6
ENST00000480671.5
CDS GCA 72 bp GGCAGGGACTCAATGGCGTGCACAAGGTTCTTCTGCTaGCCTTCCACCTGGTTCATCATCTTTGATGAGCAA +
Preference number: 6 (lower is better)
Translates to: GRDSMACTRFFC*PSTWFIIFDEQ
Trigger: TTGCTCATCAAAGATGATGAACCAGGTGGAAGGGCAGCAGAAGAACCTTGTGCACGCCATTGAGTCCCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673388.1
CDS CAA 72 bp AAGTATACCCAGCCATCGCCCTCCTGGATAAAATATTaGGGCTTCCATGGTGTGCGGAGGTTCTCGCGCTTC +
Preference number: 6 (lower is better)
Translates to: KYTQPSPSWIKY*GFHGVRRFSRF
Trigger: GAAGCGCGAGAACCTCCGCACACCATGGAAGCCCAAATATTTTATCCAGGAGGGCGATGGCTGGGTATACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000438237.6
ENST00000469557.1
CDS CAA 72 bp ATGACAGGCGGCAGAGTTACCTCCTGGATAAAATATTaGGGCTTCCATGGTGTGCGGAGGTTCTCGCGCTTC +
Preference number: 6 (lower is better)
Translates to: MTGGRVTSWIKY*GFHGVRRFSRF
Trigger: GAAGCGCGAGAACCTCCGCACACCATGGAAGCCCAAATATTTTATCCAGGAGGTAACTCTGCCGCCTGTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429492.6
CDS GCA 72 bp TGTGTTGTTTCTACTCTCCGCTTGTACCAGGCAGCATaGCTTTCTCAGGGCCCGGAGATTCTGGGAATCAAA +
Preference number: 6 (lower is better)
Translates to: CVVSTLRLYQAA*LSQGPEILGIK
Trigger: TTTGATTCCCAGAATCTCCGGGCCCTGAGAAAGGCATGCTGCCTGGTACAAGCGGAGAGTAGAAACAACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469557.1
CDS CCA 72 bp CCATTCCCCATGGGCTTTACAAACAATGGTGTTGGTTaGGTTGTGCTTCACTTCTGCGGTAACCCTGTGGAC +
Preference number: 6 (lower is better)
Translates to: PFPMGFTNNGVG*VVLHFCGNPVD
Trigger: GTCCACAGGGTTACCGCAGAAGTGAAGCACAACCCAACCAACACCATTGTTTGTAAAGCCCATGGGGAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS CCA 72 bp AGGTGGCCAGGTCTTAGGAAGGGCTGGAGCAAAGACTaGAAATCCAACCAACAGAGAGGAAGTGTTTTCTCC +
Preference number: 6 (lower is better)
Translates to: RWPGLRKGWSKD*KSNQQRGSVFS
Trigger: GGAGAAAACACTTCCTCTCTGTTGGTTGGATTTCCAGTCTTTGCTCCAGCCCTTCCTAAGACCTGGCCACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467955.5
CDS CCA 72 bp GAGGGTATCTCAGCTGAAAGGGTGGATGTTCCACTTTaGTCAGAAGTCATGCCGAAGACAGAAGCTGTGGAC +
Preference number: 6 (lower is better)
Translates to: EGISAERVDVPL*SEVMPKTEAVD
Trigger: GTCCACAGCTTCTGTCTTCGGCATGACTTCTGACCAAAGTGGAACATCCACCCTTTCAGCTGAGATACCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490009.1
CDS CAA 72 bp TTCGTGTGGAATATCACTGTCGCTGAGTACCCAGTCTaGGCACAGTTGATGCTGACTTTTCCTCCGAGCTCC +
Preference number: 6 (lower is better)
Translates to: FVWNITVAEYPV*AQLMLTFPPSS
Trigger: GGAGCTCGGAGGAAAAGTCAGCATCAACTGTGCCAAGACTGGGTACTCAGCGACAGTGATATTCCACACGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS CAA 72 bp CCTCAAAGGCCACCGGCGAATTTAGGGGACCTTATCTaGCCATTTGGAGGTAGATTCAACAACGAGGCCACT +
Preference number: 6 (lower is better)
Translates to: PQRPPANLGDLI*PFGGRFNNEAT
Trigger: AGTGGCCTCGTTGTTGAATCTACCTCCAAATGGCAAGATAAGGTCCCCTAAATTCGCCGGTGGCCTTTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490009.1
CDS CAA 90 bp GCTCTGGCTGTGAGGTTTGTTCGTCTTCAGCAGAGTTTGGTAAAATaGCCCAGGTTATGTTGGCACTGGCTGATGGCAAAGAGCCAAGTG +
Preference number: 6 (lower is better)
Translates to: ALAVRFVRLQQSLVK*PRLCWHWLMAKSQV
Trigger: CACTTGGCTCTTTGCCATCAGCCAGTGCCAACATAACCTGGGCAATTTTACCAAACTCTGCTGAAGACGAACAAACCTCACAGCCAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396556.7
ENST00000428241.1
ENST00000429492.6
ENST00000438237.6
ENST00000467647.1
ENST00000673388.1
CDS CAA 90 bp TTGGCTCTGGCTCTGGCTGTGAGGTTTGTTCGTCTTCAGCAGAGTTaGGTAAAATTGCCCAGGTTATGTTGGCACTGGCTGATGGCAAAG +
Preference number: 6 (lower is better)
Translates to: LALALAVRFVRLQQS*VKLPRLCWHWLMAK
Trigger: CTTTGCCATCAGCCAGTGCCAACATAACCTGGGCAATTTTACCAAACTCTGCTGAAGACGAACAAACCTCACAGCCAGAGCCAGAGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
ENST00000673388.1
CDS CAA 90 bp TTCCTGGACTCCATGGGTCCCTGCTTCTCAAGAGGTCTGATCTTCTaGGGATACACTGGCAGTGTGGTTGTGTCGATGACTTTGGTTTCT +
Preference number: 6 (lower is better)
Translates to: FLDSMGPCFSRGLIF*GYTGSVVVSMTLVS
Trigger: AGAAACCAAAGTCATCGACACAACCACACTGCCAGTGTATCCCAAGAAGATCAGACCTCTTGAGAAGCAGGGACCCATGGAGTCCAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS CAA 90 bp TCCTCTCTGGCTCTGGCTGTGAGGTTTGTTCGTCTTCAGCAGAGTTaGGTAAAATTGCCCAGGTTATGTTGGCACTGGCTGATGGCAAAG +
Preference number: 6 (lower is better)
Translates to: SSLALAVRFVRLQQS*VKLPRLCWHWLMAK
Trigger: CTTTGCCATCAGCCAGTGCCAACATAACCTGGGCAATTTTACCAAACTCTGCTGAAGACGAACAAACCTCACAGCCAGAGCCAGAGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467647.1
CDS TCA 72 bp ACGGACATGCCCATGAACTTGCTTTTGGTCCATACATaGGTGTTGACGCACAGTCTCTTCTCCTCGCACTCA +
Preference number: 6 (lower is better)
Translates to: TDMPMNLLLVHT*VLTHSLFSSHS
Trigger: TGAGTGCGAGGAGAAGAGACTGTGCGTCAACACTCATGTATGGACCAAAAGCAAGTTCATGGGCATGTCCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
ENST00000673388.1
CDS TCA 72 bp ACAATTCACCCACAGCAGCTGCCAGACACAAGAACATaGGAAGTGCCGGGCATGCACATAGCTGATTTTGTC +
Preference number: 6 (lower is better)
Translates to: TIHPQQLPDTRT*EVPGMHIADFV
Trigger: GACAAAATCAGCTATGTGCATGCCCGGCACTTCTCATGTTCTTGTGTCTGGCAGCTGCTGTGGGTGAATTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467647.1
CDS GCA 72 bp CCATGGGCTTTACAAACAATGGTGTTGGTTGGGTTGTaGTTCACTTCTGCGGTAACCCTGTGGACTTTCCCT +
Preference number: 6 (lower is better)
Translates to: PWALQTMVLVGL*FTSAVTLWTFP
Trigger: AGGGAAAGTCCACAGGGTTACCGCAGAAGTGAAGCACAACCCAACCAACACCATTGTTTGTAAAGCCCATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS GCA 72 bp GGCAGGGACTCAATGGCGTGCACAAGGTTCTTCTGCTaGCCTTCCACCTGGTTCATCATCTTAGAATTCATT +
Preference number: 6 (lower is better)
Translates to: GRDSMACTRFFC*PSTWFIILEFI
Trigger: AATGAATTCTAAGATGATGAACCAGGTGGAAGGGCAGCAGAAGAACCTTGTGCACGCCATTGAGTCCCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438237.6
ENST00000480671.5
CDS CCA 72 bp ACACTTGCTCAGCCACAAACCTTAGTTTGTAGCTTTTaGAAGGGTCATCGGCCATTGGGTGTTCGTGACAGC +
Preference number: 6 (lower is better)
Translates to: TLAQPQTLVCSF*KGHRPLGVRDS
Trigger: GCTGTCACGAACACCCAATGGCCGATGACCCTTCCAAAAGCTACAAACTAAGGTTTGTGGCTGAGCAAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
ENST00000673388.1
CDS CAA 72 bp TCCCCATGGGCTTTACAAACAATGGTGTTGGTTGGGTaGTGCTTCACTTCTGCGGTAACCCTGTGGACTTTC +
Preference number: 6 (lower is better)
Translates to: SPWALQTMVLVG*CFTSAVTLWTF
Trigger: GAAAGTCCACAGGGTTACCGCAGAAGTGAAGCACAACCCAACCAACACCATTGTTTGTAAAGCCCATGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS CCA 72 bp CTTCAGCAGAGTTTGGTAAAATTGCCCAGGTTATGTTaGCACTGGCTGATGGCAAAGAGCCAAGTGTCCCAT +
Preference number: 6 (lower is better)
Translates to: LQQSLVKLPRLC*HWLMAKSQVSH
Trigger: ATGGGACACTTGGCTCTTTGCCATCAGCCAGTGCCAACATAACCTGGGCAATTTTACCAAACTCTGCTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396556.7
ENST00000428241.1
ENST00000429492.6
ENST00000438237.6
ENST00000467647.1
ENST00000673388.1
CDS CCA 72 bp ACCAGGCAGCATGCCTTTCTCAGGGCCCGGAGATTCTaGGAATCAAATCTAATAGTAGTAGTTGGCATTCTG +
Preference number: 6 (lower is better)
Translates to: TRQHAFLRARRF*ESNLIVVVGIL
Trigger: CAGAATGCCAACTACTACTATTAGATTTGATTCCCAGAATCTCCGGGCCCTGAGAAAGGCATGCTGCCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469557.1
CDS CCA 72 bp CCAGTACGAAGTACAGCTCTGGAACAGTTAGGGTTTTaGAAGAGGAAAAACCACCGAACACAACCCATGCAC +
Preference number: 6 (lower is better)
Translates to: PVRSTALEQLGF*KRKNHRTQPMH
Trigger: GTGCATGGGTTGTGTTCGGTGGTTTTTCCTCTTCCAAAACCCTAACTGTTCCAGAGCTGTACTTCGTACTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463504.5
CDS CAA 72 bp TCTTCAGCAGAGTTTGGTAAAATTGCCCAGGTTATGTaGGCACTGGCTGATGGCAAAGAGCCAAGTGTCCCA +
Preference number: 6 (lower is better)
Translates to: SSAEFGKIAQVM*ALADGKEPSVP
Trigger: TGGGACACTTGGCTCTTTGCCATCAGCCAGTGCCAACATAACCTGGGCAATTTTACCAAACTCTGCTGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396556.7
ENST00000428241.1
ENST00000429492.6
ENST00000438237.6
ENST00000467647.1
ENST00000673388.1
CDS CAA 72 bp ACGATGCCAATGACTCTCTGTGTGACCTCACACATGTaGTTGAGCATACAAGCCTTCACCTCTCTGACTTCG +
Preference number: 6 (lower is better)
Translates to: TMPMTLCVTSHM*LSIQAFTSLTS
Trigger: CGAAGTCAGAGAGGTGAAGGCTTGTATGCTCAACAACATGTGTGAGGTCACACAGAGAGTCATTGGCATCGT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428241.1
CDS CAA 90 bp ACTATGGCTCCAGATAAAGACAGGACTCCTCGAGGCTTCTGGTGTTaGCTTTGCTCATTCACAAAATACTGCAGGATGCCAGCCTCGAAA +
Preference number: 6 (lower is better)
Translates to: TMAPDKDRTPRGFWC*LCSFTKYCRMPASK
Trigger: TTTCGAGGCTGGCATCCTGCAGTATTTTGTGAATGAGCAAAGCAAACACCAGAAGCCTCGAGGAGTCCTGTCTTTATCTGGAGCCATAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396556.7
ENST00000438237.6
ENST00000463504.5
ENST00000465626.1
ENST00000466604.5
ENST00000467955.5
ENST00000479173.1
ENST00000480671.5
CDS CAA 90 bp GTTTGTTCGTCTTCAGCAGAGTTTGGTAAAATTGCCCAGGTTATGTaGGCACTGGCTGATGGCAAAGAGCCAAGTGTCCCATTTTTCAGC +
Preference number: 6 (lower is better)
Translates to: VCSSSAEFGKIAQVM*ALADGKEPSVPFFS
Trigger: GCTGAAAAATGGGACACTTGGCTCTTTGCCATCAGCCAGTGCCAACATAACCTGGGCAATTTTACCAAACTCTGCTGAAGACGAACAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000396556.7
ENST00000428241.1
ENST00000429492.6
ENST00000438237.6
ENST00000467647.1
ENST00000673388.1
CDS CAA 90 bp GCCTCGAAATCCAGTACGAAGTACAGCTCTGGAACAGTTAGGGTTTaGGAAGAGGAAAAACCACCGAACACAACCCATGCACAGAAAGAT +
Preference number: 6 (lower is better)
Translates to: ASKSSTKYSSGTVRV*EEEKPPNTTHAQKD
Trigger: ATCTTTCTGTGCATGGGTTGTGTTCGGTGGTTTTTCCTCTTCCAAAACCCTAACTGTTCCAGAGCTGTACTTCGTACTGGATTTCGAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463504.5
CDS TCA 72 bp TCCATAGAAAGGCTTCGTGTGGAATATCACTGTCGCTaGGTACCCAGTCTTGGCACAGTTGATGCTGACTTT +
Preference number: 6 (lower is better)
Translates to: SIERLRVEYHCR*VPSLGTVDADF
Trigger: AAAGTCAGCATCAACTGTGCCAAGACTGGGTACTCAGCGACAGTGATATTCCACACGAAGCCTTTCTATGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396556.7
ENST00000429492.6
ENST00000438237.6
CDS TCA 72 bp TCCACCTGGTTCATCATCAGAAAGATCAACTGGGTTTaGGTCTTGACGATGCCAATGACTCTCTGTGTGACC +
Preference number: 6 (lower is better)
Translates to: STWFIIRKINWV*VLTMPMTLCVT
Trigger: GGTCACACAGAGAGTCATTGGCATCGTCAAGACTCAAACCCAGTTGATCTTTCTGATGATGAACCAGGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428241.1
CDS TCA 72 bp AGTAGGCCATCTTTGTTGGGTAGAGGGTATCTCAGCTaGAAGGGTGGATGTTCCACTTTGGTCAGAAGTCAT +
Preference number: 6 (lower is better)
Translates to: SRPSLLGRGYLS*KGGCSTLVRSH
Trigger: ATGACTTCTGACCAAAGTGGAACATCCACCCTTTCAGCTGAGATACCCTCTACCCAACAAAGATGGCCTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490009.1
CDS GCA 72 bp ACAGCCTCAACCCAGTTAATCTATCCAGTAAACCAGTaGAGCAAACAGCTTTCCTCTGTCAGGAGAGTGTGT +
Preference number: 6 (lower is better)
Translates to: TASTQLIYPVNQ*SKQLSSVRRVC
Trigger: ACACACTCTCCTGACAGAGGAAAGCTGTTTGCTGCACTGGTTTACTGGATAGATTAACTGGGTTGAGGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466604.5
CDS GCA 72 bp AATTCAGAGCCTGAGTTTGGTGTCCTTCCCACACACTaGACAGGTGAGATTTCTCCTCTGGAAGAGTCTTTT +
Preference number: 6 (lower is better)
Translates to: NSEPEFGVLPTH*TGEISPLEESF
Trigger: AAAAGACTCTTCCAGAGGAGAAATCTCACCTGTGCAGTGTGTGGGAAGGACACCAAACTCAGGCTCTGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490009.1
CDS CAA 72 bp GTGAGGTTTGTTCGTCTTCAGCAGAGTTTGGTAAAATaGCCCAGGTTATGTTGGCACTGGCTGATGGCAAAG +
Preference number: 6 (lower is better)
Translates to: VRFVRLQQSLVK*PRLCWHWLMAK
Trigger: CTTTGCCATCAGCCAGTGCCAACATAACCTGGGCAATTTTACCAAACTCTGCTGAAGACGAACAAACCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396556.7
ENST00000428241.1
ENST00000429492.6
ENST00000438237.6
ENST00000467647.1
ENST00000673388.1
CDS CAA 72 bp TCCAGTACGAAGTACAGCTCTGGAACAGTTAGGGTTTaGGAAGAGGAAAAACCACCGAACACAACCCATGCA +
Preference number: 6 (lower is better)
Translates to: SSTKYSSGTVRV*EEEKPPNTTHA
Trigger: TGCATGGGTTGTGTTCGGTGGTTTTTCCTCTTCCAAAACCCTAACTGTTCCAGAGCTGTACTTCGTACTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463504.5
CDS CAA 72 bp AGGAAGCATCCTGCCTGCACTCAGCACCAAGAAGAGTaGGTTCCACTTCTTGGTCAAATCCATTCCAAGTTT +
Preference number: 6 (lower is better)
Translates to: RKHPACTQHQEE*VPLLGQIHSKF
Trigger: AAACTTGGAATGGATTTGACCAAGAAGTGGAACCAACTCTTCTTGGTGCTGAGTGCAGGCAGGATGCTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479396.1
CDS CAA 72 bp TTCCACCTGGTTCATCATCAGAAAGATCAACTGGGTTaGAGTCTTGACGATGCCAATGACTCTCTGTGTGAC +
Preference number: 6 (lower is better)
Translates to: FHLVHHQKDQLG*SLDDANDSLCD
Trigger: GTCACACAGAGAGTCATTGGCATCGTCAAGACTCAAACCCAGTTGATCTTTCTGATGATGAACCAGGTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428241.1
CDS CAA 72 bp GTATTTGGCACAAGCTCGAAGCTGAGTCACCCAGAATaGTTTCTCTTTTGCATCAGCAGCTTTCCTTTGTCC +
Preference number: 6 (lower is better)
Translates to: VFGTSSKLSHPE*FLFCISSFPLS
Trigger: GGACAAAGGAAAGCTGCTGATGCAAAAGAGAAACAATTCTGGGTGACTCAGCTTCGAGCTTGTGCCAAATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463504.5
CDS CAA 90 bp TTCCATGTGGTATTTGGCACAAGCTCGAAGCTGAGTCACCCAGAATaGTTTCTCTTTTGCATCAGCAGCTTTCCTTTGTCCTTAATTCCT +
Preference number: 6 (lower is better)
Translates to: FHVVFGTSSKLSHPE*FLFCISSFPLSLIP
Trigger: AGGAATTAAGGACAAAGGAAAGCTGCTGATGCAAAAGAGAAACAATTCTGGGTGACTCAGCTTCGAGCTTGTGCCAAATACCACATGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463504.5
CDS TCA 72 bp TTCATTTCCATGTGGTATTTGGCACAAGCTCGAAGCTaGGTCACCCAGAATTGTTTCTCTTTTGCATCAGCA +
Preference number: 6 (lower is better)
Translates to: FISMWYLAQARS*VTQNCFSFASA
Trigger: TGCTGATGCAAAAGAGAAACAATTCTGGGTGACTCAGCTTCGAGCTTGTGCCAAATACCACATGGAAATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000396556.7
ENST00000438237.6
ENST00000452791.1
ENST00000463504.5
ENST00000466604.5
ENST00000467955.5
ENST00000479173.1
ENST00000480671.5
ENST00000485205.5
CDS GCA 72 bp GACAGGAATAACGTGAAGTCGCTCAGACACTCAGCTTaGCATAATATAGTCCCCTCAATATTTTCTTGCTTC +
Preference number: 6 (lower is better)
Translates to: DRNNVKSLRHSA*HNIVPSIFSCF
Trigger: GAAGCAAGAAAATATTGAGGGGACTATATTATGGCAAGCTGAGTGTCTGAGCGACTTCACGTTATTCCTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479396.1
CDS CCA 72 bp CCGGAGATTCTGGGAATCAAATCTAATAGTAGTAGTTaGCATTCTGCTACTACTACAAACAACGGTAGCAGG +
Preference number: 6 (lower is better)
Translates to: PEILGIKSNSSS*HSATTTNNGSR
Trigger: CCTGCTACCGTTGTTTGTAGTAGTAGCAGAATGCCAACTACTACTATTAGATTTGATTCCCAGAATCTCCGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469557.1
CDS CAA 72 bp GTATTTGGCACAAGCTCGAAGCTGAGTCACCCAGAATaGTTTCTCTTTTGCATCAGCAGCTCTCAGTTTAAA +
Preference number: 6 (lower is better)
Translates to: VFGTSSKLSHPE*FLFCISSSQFK
Trigger: TTTAAACTGAGAGCTGCTGATGCAAAAGAGAAACAATTCTGGGTGACTCAGCTTCGAGCTTGTGCCAAATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396556.7
ENST00000438237.6
ENST00000466604.5
ENST00000467955.5
ENST00000479173.1
ENST00000480671.5
CDS GCA 72 bp TCAGCTTGCCATAATATAGTCCCCTCAATATTTTCTTaGTTCTCCATATCTGACCTTGGCAATTTCAATTTC +
Preference number: 6 (lower is better)
Translates to: SACHNIVPSIFS*FSISDLGNFNF
Trigger: GAAATTGAAATTGCCAAGGTCAGATATGGAGAAGCAAGAAAATATTGAGGGGACTATATTATGGCAAGCTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479396.1