RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OSBP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000184792

Ensembl transcript IDs: ENST00000332585.11, ENST00000401475.5, ENST00000403222.7, ENST00000407373.5, ENST00000424224.5, ENST00000431368.5, ENST00000433183.2, ENST00000437268.6, ENST00000438716.3, ENST00000445781.5, ENST00000446658.6, ENST00000452656.5, ENST00000453621.5, ENST00000454145.5, ENST00000464341.1, ENST00000477355.5, ENST00000496367.1, ENST00000496575.1, ENST00000535268.5

Found 1481 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TTGCGCAGCCCATGGCCCGGGCCAGCCGGCCTGAGTTGTGGTAACTaGGGCAGGGGTTCCGGTAGGGCCCAGGTCCATAATGAAGGGGCA +
Preference number: 1 (lower is better)
Translates to: LRSPWPGPAGLSCGN*GRGSGRAQVHNEGA
Trigger: TGCCCCTTCATTATGGACCTGGGCCCTACCGGAACCCCTGCCCCAGTTACCACAACTCAGGCCGGCTGGCCCGGGCCATGGGCTGCGCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
3UTR CCA 90 bp AGGGCCCAGGTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCTaGGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGT +
Preference number: 1 (lower is better)
Translates to: RAQVHNEGARVTRRT*GLERTQVSPSSFQG
Trigger: ACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCCCAGGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGACCTGGGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
3UTR CCA 90 bp TCACCAGCCCAGGCTGGGCCAAGGGTTTGTTCATTATTGCTGATTTaGGGCCTGGGTCTCAGGGCGGGGAGCACCTGCAGGCCCTGCCTT +
Preference number: 1 (lower is better)
Translates to: SPAQAGPRVCSLLLI*GLGLRAGSTCRPCL
Trigger: AAGGCAGGGCCTGCAGGTGCTCCCCGCCCTGAGACCCAGGCCCCAAATCAGCAATAATGAACAAACCCTTGGCCCAGCCTGGGCTGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
3UTR CCA 90 bp CACGGCAGCGGGTACTTCTTCCACAGCAGCTTGGCTGACAGGGTCTaGTACACTGTCTTCTGCTTCCCGTCAGAGCTGGGGCTGCTGGGA +
Preference number: 1 (lower is better)
Translates to: HGSGYFFHSSLADRV*YTVFCFPSELGLLG
Trigger: TCCCAGCAGCCCCAGCTCTGACGGGAAGCAGAAGACAGTGTACCAGACCCTGTCAGCCAAGCTGCTGTGGAAGAAGTACCCGCTGCCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433183.2
3UTR TCA 90 bp CAGCCCTACTCACGGCAGCGGGTACTTCTTCCACAGCAGCTTGGCTaGCAGGGTCTGGTACACTGTCTTCTGCTTCCCGTCAGAGCTGGG +
Preference number: 1 (lower is better)
Translates to: QPYSRQRVLLPQQLG*QGLVHCLLLPVRAG
Trigger: CCCAGCTCTGACGGGAAGCAGAAGACAGTGTACCAGACCCTGTCAGCCAAGCTGCTGTGGAAGAAGTACCCGCTGCCGTGAGTAGGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433183.2
3UTR CCA 90 bp GCGCTCAGAAGATGTTGGGGCACATATGCCAGTCTTGCTTCTCCTTaGCCTCCCAGTAGCCGCCCTTGTACACACAGGCCATCTCCCCGG +
Preference number: 1 (lower is better)
Translates to: ALRRCWGTYASLASP*PPSSRPCTHRPSPR
Trigger: CCGGGGAGATGGCCTGTGTGTACAAGGGCGGCTACTGGGAGGCCAAGGAGAAGCAAGACTGGCATATGTGCCCCAACATCTTCTGAGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452656.5
3UTR CCA 90 bp GAGGAGGGATGCAAGGTCTCTGGTGCCCAGGTCACCAGCCCAGGCTaGGCCAAGGGTTTGTTCATTATTGCTGATTTGGGGCCTGGGTCT +
Preference number: 1 (lower is better)
Translates to: EEGCKVSGAQVTSPG*AKGLFIIADLGPGS
Trigger: AGACCCAGGCCCCAAATCAGCAATAATGAACAAACCCTTGGCCCAGCCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCATCCCTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
3UTR TCA 90 bp TCTTCTGCTTCCCGTCAGAGCTGGGGCTGCTGGGACTGCTATGCATaGCCTTGGAGCACTCCATTTGTTCATCCCACGAGCCGGACAGCA +
Preference number: 1 (lower is better)
Translates to: SSASRQSWGCWDCYA*PWSTPFVHPTSRTA
Trigger: TGCTGTCCGGCTCGTGGGATGAACAAATGGAGTGCTCCAAGGTCATGCATAGCAGTCCCAGCAGCCCCAGCTCTGACGGGAAGCAGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433183.2
3UTR GCA 90 bp TGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTaGATCTGTGGATGGGAGCTCCAGAAACTCTGTGCTCTGCTGGGC +
Preference number: 1 (lower is better)
Translates to: CCPQIHMGVTISTPS*ICGWELQKLCALLG
Trigger: GCCCAGCAGAGCACAGAGTTTCTGGAGCTCCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
3UTR GCA 90 bp ACTCCATTTGTTCATCCCACGAGCCGGACAGCACGTAATGGGCCTTaGCCTGGCTGTCACTCACCACTCCTGTCACCTGTGGACATTGGC +
Preference number: 1 (lower is better)
Translates to: TPFVHPTSRTARNGP*PGCHSPLLSPVDIG
Trigger: GCCAATGTCCACAGGTGACAGGAGTGGTGAGTGACAGCCAGGGCAAGGCCCATTACGTGCTGTCCGGCTCGTGGGATGAACAAATGGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433183.2
3UTR GCA 90 bp ACTGTCTTCTGCTTCCCGTCAGAGCTGGGGCTGCTGGGACTGCTATaGATGACCTTGGAGCACTCCATTTGTTCATCCCACGAGCCGGAC +
Preference number: 1 (lower is better)
Translates to: TVFCFPSELGLLGLL*MTLEHSICSSHEPD
Trigger: GTCCGGCTCGTGGGATGAACAAATGGAGTGCTCCAAGGTCATGCATAGCAGTCCCAGCAGCCCCAGCTCTGACGGGAAGCAGAAGACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433183.2
3UTR GCA 90 bp TTCTTCCACAGCAGCTTGGCTGACAGGGTCTGGTACACTGTCTTCTaGTTCCCGTCAGAGCTGGGGCTGCTGGGACTGCTATGCATGACC +
Preference number: 1 (lower is better)
Translates to: FFHSSLADRVWYTVF*FPSELGLLGLLCMT
Trigger: GGTCATGCATAGCAGTCCCAGCAGCCCCAGCTCTGACGGGAAGCAGAAGACAGTGTACCAGACCCTGTCAGCCAAGCTGCTGTGGAAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433183.2
3UTR CCA 90 bp GTGCAGGCGCCTGTATTTGTTGCAAGGGTGGCGCTCAGAAGATGTTaGGGCACATATGCCAGTCTTGCTTCTCCTTGGCCTCCCAGTAGC +
Preference number: 1 (lower is better)
Translates to: VQAPVFVARVALRRC*GTYASLASPWPPSS
Trigger: GCTACTGGGAGGCCAAGGAGAAGCAAGACTGGCATATGTGCCCCAACATCTTCTGAGCGCCACCCTTGCAACAAATACAGGCGCCTGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452656.5
3UTR TCA 90 bp GGTGGGGGTGTGGGCAGCTCAGATACCATCGAGGACTTGATATGTTaGGCTACAAAATTCTCCCAACTCAAAGCGGTCTGGCTTCCTGAT +
Preference number: 1 (lower is better)
Translates to: GGGVGSSDTIEDLIC*ATKFSQLKAVWLPD
Trigger: ATCAGGAAGCCAGACCGCTTTGAGTTGGGAGAATTTTGTAGCTCAACATATCAAGTCCTCGATGGTATCTGAGCTGCCCACACCCCCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
3UTR CCA 90 bp GGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACAGGTaGGCCAGGCTGTGCAGGCGCCTGTATTTGTTGCAAGGGTGGCGC +
Preference number: 1 (lower is better)
Translates to: GERPFSTKLSALMNR*ARLCRRLYLLQGWR
Trigger: GCGCCACCCTTGCAACAAATACAGGCGCCTGCACAGCCTGGCCCACCTGTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
3UTR GCA 90 bp CATTTATTTACTGTTCGGTGTCTGCCTTCACACTGGGATGTCGGCTaGATAATACTGTTCTCTGCCCATGTGTGGACTGAACCCTCCCGA +
Preference number: 1 (lower is better)
Translates to: HLFTVRCLPSHWDVG*IILFSAHVWTEPSR
Trigger: TCGGGAGGGTTCAGTCCACACATGGGCAGAGAACAGTATTATGCAGCCGACATCCCAGTGTGAAGGCAGACACCGAACAGTAAATAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433183.2
3UTR GCA 90 bp TTCAGTACTAAATTGAGTGCATTAATGAACAGGTGGGCCAGGCTGTaGAGGCGCCTGTATTTGTTGCAAGGGTGGCGCTCAGAAGATGTT +
Preference number: 1 (lower is better)
Translates to: FSTKLSALMNRWARL*RRLYLLQGWRSEDV
Trigger: AACATCTTCTGAGCGCCACCCTTGCAACAAATACAGGCGCCTGCACAGCCTGGCCCACCTGTTCATTAATGCACTCAATTTAGTACTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452656.5
3UTR CCA 90 bp TTGATAGTTTCACATTTATTTACTGTTCGGTGTCTGCCTTCACACTaGGATGTCGGCTGCATAATACTGTTCTCTGCCCATGTGTGGACT +
Preference number: 1 (lower is better)
Translates to: LIVSHLFTVRCLPSH*DVGCIILFSAHVWT
Trigger: AGTCCACACATGGGCAGAGAACAGTATTATGCAGCCGACATCCCAGTGTGAAGGCAGACACCGAACAGTAAATAAATGTGAAACTATCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433183.2
3UTR-3UTR TCA 90 bp GGGATGCAAGGTCTCTGGTGCCCAGGTCACCAGCCCAGGCTGGGCCAAGGGTTTATGAAGGGGCACGGGTaGCCCGGCGCACCTGGGGGC +
Preference number: 2 (lower is better)
Translates to: GMQGLWCPGHQPRLGQGFMKGHG*PGAPGG
Trigger: GCCCCCAGGTGCGCCGGGTCACCCGTGCCCCTTCAT...AAACCCTTGGCCCAGCCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCATCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
3UTR-3UTR GCA 90 bp AGGAGGGATGCAAGGTCTCTGGTGCCCAGGTCACCAGCCCAGGCTGGGCCAAGGAGGGCGGGGAGCACCTaGAGGCCCTGCCTTCCAGCC +
Preference number: 2 (lower is better)
Translates to: RRDARSLVPRSPAQAGPRRAGST*RPCLPA
Trigger: GGCTGGAAGGCAGGGCCTGCAGGTGCTCCCCGCCCT...CCTTGGCCCAGCCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCATCCCTCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
3UTR-3UTR GCA 90 bp GCGGGGCCCCTGCCAGCCCTACTCACGGCAGCGGGTACTTCTTCCACAGCAGCTCAGGACCAGCGTAGGTaGAGACTCTGCCCTGGGCCC +
Preference number: 2 (lower is better)
Translates to: AGPLPALLTAAGTSSTAAQDQRR*RLCPGP
Trigger: GGGCCCAGGGCAGAGTCTGCACCTACGCTGGTCCTG...AGCTGCTGTGGAAGAAGTACCCGCTGCCGTGAGTAGGGCTGGCAGGGGCCCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433183.2
3UTR-3UTR CCA 90 bp GGGATGCAAGGTCTCTGGTGCCCAGGTCACCAGCCCAGGCTGGGCCAAGGGTTTGATTTGCGCAGCCCATaGCCCGGGCCAGCCGGCCTG +
Preference number: 2 (lower is better)
Translates to: GMQGLWCPGHQPRLGQGFDLRSP*PGPAGL
Trigger: CAGGCCGGCTGGCCCGGGCCATGGGCTGCGCAAATC...AAACCCTTGGCCCAGCCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCATCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
3UTR-3UTR TCA 90 bp CCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGATGAAGGGGCACGGGTaGCCCGGCGCACCTGGGGGC +
Preference number: 2 (lower is better)
Translates to: PRSALPPSKVGVPRKCGEMKGHG*PGAPGG
Trigger: GCCCCCAGGTGCGCCGGGTCACCCGTGCCCCTTCAT...CTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
3UTR-3UTR GCA 90 bp GGGATGCAAGGTCTCTGGTGCCCAGGTCACCAGCCCAGGCTGGGCCAAGGGTTTTGGGGGCTGGTGATTTaGGCAGCCCATGGCCCGGGC +
Preference number: 2 (lower is better)
Translates to: GMQGLWCPGHQPRLGQGFWGLVI*AAHGPG
Trigger: GCCCGGGCCATGGGCTGCGCAAATCACCAGCCCCCA...AAACCCTTGGCCCAGCCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCATCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
3UTR-3UTR CCA 90 bp GGGATGCAAGGTCTCTGGTGCCCAGGTCACCAGCCCAGGCTGGGCCAAGGGTTTGGCGCACCTGGGGGCTaGAGAGAACCCAGGTCAGCC +
Preference number: 2 (lower is better)
Translates to: GMQGLWCPGHQPRLGQGFGAPGG*REPRSA
Trigger: GGCTGACCTGGGTTCTCTCCAGCCCCCAGGTGCGCC...AAACCCTTGGCCCAGCCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCATCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
3UTR-3UTR TCA 90 bp GGGCCAAGGGTTTGTTCATTATTGCTGATTTGGGGCCTGGGTCTCAGGGCGGGGATGAAGGGGCACGGGTaGCCCGGCGCACCTGGGGGC +
Preference number: 2 (lower is better)
Translates to: GPRVCSLLLIWGLGLRAGMKGHG*PGAPGG
Trigger: GCCCCCAGGTGCGCCGGGTCACCCGTGCCCCTTCAT...CCCCGCCCTGAGACCCAGGCCCCAAATCAGCAATAATGAACAAACCCTTGGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
3UTR-3UTR TCA 90 bp GGGATGCAAGGTCTCTGGTGCCCAGGTCACCAGCCCAGGCTGGGCCAAGGGTTTTGGGTTGGGGGCTGGTaGTTTGCGCAGCCCATGGCC +
Preference number: 2 (lower is better)
Translates to: GMQGLWCPGHQPRLGQGFWVGGW*FAQPMA
Trigger: GGCCATGGGCTGCGCAAATCACCAGCCCCCAACCCA...AAACCCTTGGCCCAGCCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCATCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
3UTR-3UTR CCA 90 bp GGCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCGATTTGCGCAGCCCATaGCCCGGGCCAGCCGGCCTG +
Preference number: 2 (lower is better)
Translates to: GQGLLPSNPHGGYHQYPLDLRSP*PGPAGL
Trigger: CAGGCCGGCTGGCCCGGGCCATGGGCTGCGCAAATC...GAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
3UTR-3UTR CCA 90 bp GCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCGATTTGCGCAGCCCATaGCCCGGGCCAGCCGGCCTG +
Preference number: 2 (lower is better)
Translates to: ARDCCPQIHMGVTISTPSDLRSP*PGPAGL
Trigger: CAGGCCGGCTGGCCCGGGCCATGGGCTGCGCAAATC...GGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
3UTR-3UTR TCA 90 bp GCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCCCGGGCCAGCCGGCCTaGGTTGTGGTAACTGGGGCA +
Preference number: 2 (lower is better)
Translates to: ARDCCPQIHMGVTISTPSPGQPA*VVVTGA
Trigger: TGCCCCAGTTACCACAACTCAGGCCGGCTGGCCCGG...GGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
3UTR-3UTR GCA 90 bp AGGAGGGATGCAAGGTCTCTGGTGCCCAGGTCACCAGCCCAGGCTGGGCCAAGGGCTCCAGAAACTCTGTaGTCTGCTGGGCTGGGGCAG +
Preference number: 2 (lower is better)
Translates to: RRDARSLVPRSPAQAGPRAPETL*SAGLGQ
Trigger: CTGCCCCAGCCCAGCAGAGCACAGAGTTTCTGGAGC...CCTTGGCCCAGCCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCATCCCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
3UTR-3UTR GCA 90 bp AGGAGGGATGCAAGGTCTCTGGTGCCCAGGTCACCAGCCCAGGCTGGGCCAAGGGAGGCCAGGGACTGCTaGCCTCAAATCCACATGGGG +
Preference number: 2 (lower is better)
Translates to: RRDARSLVPRSPAQAGPREARDC*PQIHMG
Trigger: CCCCATGTGGATTTGAGGGCAGCAGTCCCTGGCCTC...CCTTGGCCCAGCCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCATCCCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
3UTR-3UTR CCA 90 bp AGTTCCTCCCTGGGTTGGGGGCTGGTGATTTGCGCAGCCCATGGCCCGGGCCAGGCATTAATGAACAGGTaGGCCAGGCTGTGCAGGCGC +
Preference number: 2 (lower is better)
Translates to: SSSLGWGLVICAAHGPGQALMNR*ARLCRR
Trigger: GCGCCTGCACAGCCTGGCCCACCTGTTCATTAATGC...CTGGCCCGGGCCATGGGCTGCGCAAATCACCAGCCCCCAACCCAGGGAGGAACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
3UTR CAA 90 bp GTGCCCAGGTCACCAGCCCAGGCTGGGCCAAGGGTTTGTTCATTATaGCTGATTTGGGGCCTGGGTCTCAGGGCGGGGAGCACCTGCAGG +
Preference number: 2 (lower is better)
Translates to: VPRSPAQAGPRVCSL*LIWGLGLRAGSTCR
Trigger: CCTGCAGGTGCTCCCCGCCCTGAGACCCAGGCCCCAAATCAGCAATAATGAACAAACCCTTGGCCCAGCCTGGGCTGGTGACCTGGGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
3UTR-3UTR TCA 90 bp GGCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCTGGGTTGGGGGCTGGTaGTTTGCGCAGCCCATGGCC +
Preference number: 2 (lower is better)
Translates to: GQGLLPSNPHGGYHQYPLWVGGW*FAQPMA
Trigger: GGCCATGGGCTGCGCAAATCACCAGCCCCCAACCCA...GAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
3UTR-3UTR GCA 90 bp GGGCCAAGGGTTTGTTCATTATTGCTGATTTGGGGCCTGGGTCTCAGGGCGGGGTGGGGGCTGGTGATTTaGGCAGCCCATGGCCCGGGC +
Preference number: 2 (lower is better)
Translates to: GPRVCSLLLIWGLGLRAGWGLVI*AAHGPG
Trigger: GCCCGGGCCATGGGCTGCGCAAATCACCAGCCCCCA...CCCCGCCCTGAGACCCAGGCCCCAAATCAGCAATAATGAACAAACCCTTGGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
3UTR-3UTR GCA 90 bp AGGAGGGATGCAAGGTCTCTGGTGCCCAGGTCACCAGCCCAGGCTGGGCCAAGGGGTGAGGCCAGGGACTaGTGCCCTCAAATCCACATG +
Preference number: 2 (lower is better)
Translates to: RRDARSLVPRSPAQAGPRGEARD*CPQIHM
Trigger: CATGTGGATTTGAGGGCAGCAGTCCCTGGCCTCACC...CCTTGGCCCAGCCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCATCCCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
3UTR-3UTR CCA 90 bp GGGCCAGCCGGCCTGAGTTGTGGTAACTGGGGCAGGGGTTCCGGTAGGGCCCAGGGGCTGGGAATGGGCTaGGAGAAAGACCATTCAGTA +
Preference number: 2 (lower is better)
Translates to: GPAGLSCGNWGRGSGRAQGLGMG*EKDHSV
Trigger: TACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCC...CTGGGCCCTACCGGAACCCCTGCCCCAGTTACCACAACTCAGGCCGGCTGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
3UTR-3UTR CCA 90 bp GGGCCAGCCGGCCTGAGTTGTGGTAACTGGGGCAGGGGTTCCGGTAGGGCCCAGGGAAATAGGAAGGGCTaGGAATGGGCTGGGAGAAAG +
Preference number: 2 (lower is better)
Translates to: GPAGLSCGNWGRGSGRAQGNRKG*EWAGRK
Trigger: CTTTCTCCCAGCCCATTCCCAGCCCTTCCTATTTCC...CTGGGCCCTACCGGAACCCCTGCCCCAGTTACCACAACTCAGGCCGGCTGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
3UTR-3UTR CCA 90 bp TCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGAGCTCCGGCGCACCTGGGGGCTaGAGAGAACCCAGGTCAGCC +
Preference number: 2 (lower is better)
Translates to: STWGLPSVPPPASVDGSSGAPGG*REPRSA
Trigger: GGCTGACCTGGGTTCTCTCCAGCCCCCAGGTGCGCC...GGAGCTCCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
3UTR-3UTR CCA 90 bp GTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCTGGGGGCTGGAGAGAACCAGTCTTGCTTCTCCTTaGCCTCCCAGTAGCCGCCCT +
Preference number: 2 (lower is better)
Translates to: VHNEGARVTRRTWGLERTSLASP*PPSSRP
Trigger: AGGGCGGCTACTGGGAGGCCAAGGAGAAGCAAGACT...GGTTCTCTCCAGCCCCCAGGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452656.5
3UTR-3UTR TCA 90 bp TCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGAGCTCCTGGGTTGGGGGCTGGTaGTTTGCGCAGCCCATGGCC +
Preference number: 2 (lower is better)
Translates to: STWGLPSVPPPASVDGSSWVGGW*FAQPMA
Trigger: GGCCATGGGCTGCGCAAATCACCAGCCCCCAACCCA...GGAGCTCCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
3UTR-3UTR TCA 90 bp CCTCCTTCCCTCTCCTTTGCCTGTGGCGGGGCCCCTGCCAGCCCTACTCACGGCTGGGACTGCTATGCATaGCCTTGGAGCACTCCATTT +
Preference number: 2 (lower is better)
Translates to: PPSLSFACGGAPASPTHGWDCYA*PWSTPF
Trigger: AAATGGAGTGCTCCAAGGTCATGCATAGCAGTCCCA...GCCGTGAGTAGGGCTGGCAGGGGCCCCGCCACAGGCAAAGGAGAGGGAAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433183.2
3UTR-3UTR GCA 90 bp GGGATGCAAGGTCTCTGGTGCCCAGGTCACCAGCCCAGGCTGGGCCAAGGGTTTAGGTGGGCCAGGCTGTaGAGGCGCCTGTATTTGTTG +
Preference number: 2 (lower is better)
Translates to: GMQGLWCPGHQPRLGQGFRWARL*RRLYLL
Trigger: CAACAAATACAGGCGCCTGCACAGCCTGGCCCACCT...AAACCCTTGGCCCAGCCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCATCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
3UTR-3UTR GCA 90 bp GGCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCAGAAACTCTGTGCTCTaGTGGGCTGGGGCAGCCCCC +
Preference number: 2 (lower is better)
Translates to: GQGLLPSNPHGGYHQYPLRNSVL*WAGAAP
Trigger: GGGGGCTGCCCCAGCCCAGCAGAGCACAGAGTTTCT...GAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
3UTR-3UTR GCA 90 bp AGGAGGGATGCAAGGTCTCTGGTGCCCAGGTCACCAGCCCAGGCTGGGCCAAGGATCAGTACCCCCTCCTaGATCTGTGGATGGGAGCTC +
Preference number: 2 (lower is better)
Translates to: RRDARSLVPRSPAQAGPRISTPS*ICGWEL
Trigger: GAGCTCCCATCCACAGATGCAGGAGGGGGTACTGAT...CCTTGGCCCAGCCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCATCCCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
3UTR-3UTR CCA 90 bp TGGGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCGCATTAATGAACAGGTaGGCCAGGCTGTGCAGGCGC +
Preference number: 2 (lower is better)
Translates to: WGLERTQVSPSSFQGGSPALMNR*ARLCRR
Trigger: GCGCCTGCACAGCCTGGCCCACCTGTTCATTAATGC...GGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
3UTR-3UTR CCA 90 bp AGTTCCTCCCTGGGTTGGGGGCTGGTGATTTGCGCAGCCCATGGCCCGGGCCAGGGAAATAGGAAGGGCTaGGAATGGGCTGGGAGAAAG +
Preference number: 2 (lower is better)
Translates to: SSSLGWGLVICAAHGPGQGNRKG*EWAGRK
Trigger: CTTTCTCCCAGCCCATTCCCAGCCCTTCCTATTTCC...CTGGCCCGGGCCATGGGCTGCGCAAATCACCAGCCCCCAACCCAGGGAGGAACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
3UTR CAA 90 bp AAGGTCTCTGGTGCCCAGGTCACCAGCCCAGGCTGGGCCAAGGGTTaGTTCATTATTGCTGATTTGGGGCCTGGGTCTCAGGGCGGGGAG +
Preference number: 2 (lower is better)
Translates to: KVSGAQVTSPGWAKG*FIIADLGPGSQGGE
Trigger: CTCCCCGCCCTGAGACCCAGGCCCCAAATCAGCAATAATGAACAAACCCTTGGCCCAGCCTGGGCTGGTGACCTGGGCACCAGAGACCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
3UTR-3UTR GCA 90 bp CCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGTGGGGGCTGGTGATTTaGGCAGCCCATGGCCCGGGC +
Preference number: 2 (lower is better)
Translates to: PQIHMGVTISTPSCICGWWGLVI*AAHGPG
Trigger: GCCCGGGCCATGGGCTGCGCAAATCACCAGCCCCCA...CCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
3UTR-3UTR GCA 90 bp TCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGAGCTCCAGAAACTCTGTGCTCTaGTGGGCTGGGGCAGCCCCC +
Preference number: 2 (lower is better)
Translates to: STWGLPSVPPPASVDGSSRNSVL*WAGAAP
Trigger: GGGGGCTGCCCCAGCCCAGCAGAGCACAGAGTTTCT...GGAGCTCCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
3UTR-3UTR GCA 90 bp AGCGGGTACTTCTTCCACAGCAGCTTGGCTGACAGGGTCTGGTACACTGTCTTCCGTAGGTGCAGACTCTaGCCTGGGCCCCCTGGGGTG +
Preference number: 2 (lower is better)
Translates to: SGYFFHSSLADRVWYTVFRRCRL*PGPPGV
Trigger: CACCCCAGGGGGCCCAGGGCAGAGTCTGCACCTACG...GAAGACAGTGTACCAGACCCTGTCAGCCAAGCTGCTGTGGAAGAAGTACCCGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433183.2
3UTR-3UTR CCA 90 bp GGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGCATTAATGAACAGGTaGGCCAGGCTGTGCAGGCGC +
Preference number: 2 (lower is better)
Translates to: GAGENPGQPFLLPRWESQALMNR*ARLCRR
Trigger: GCGCCTGCACAGCCTGGCCCACCTGTTCATTAATGC...TTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
3UTR-3UTR CCA 90 bp GGCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCTGTGCTCTGCTGGGCTaGGGCAGCCCCCTTCTGTTT +
Preference number: 2 (lower is better)
Translates to: GQGLLPSNPHGGYHQYPLCALLG*GSPLLF
Trigger: AAACAGAAGGGGGCTGCCCCAGCCCAGCAGAGCACA...GAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
3UTR CAA 90 bp GCTGGGGCTGCTGGGACTGCTATGCATGACCTTGGAGCACTCCATTaGTTCATCCCACGAGCCGGACAGCACGTAATGGGCCTTGCCCTG +
Preference number: 2 (lower is better)
Translates to: AGAAGTAMHDLGALH*FIPRAGQHVMGLAL
Trigger: CAGGGCAAGGCCCATTACGTGCTGTCCGGCTCGTGGGATGAACAAATGGAGTGCTCCAAGGTCATGCATAGCAGTCCCAGCAGCCCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433183.2
3UTR-3UTR GCA 90 bp GGCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCAGGTGGGCCAGGCTGTaGAGGCGCCTGTATTTGTTG +
Preference number: 2 (lower is better)
Translates to: GQGLLPSNPHGGYHQYPLRWARL*RRLYLL
Trigger: CAACAAATACAGGCGCCTGCACAGCCTGGCCCACCT...GAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
3UTR-3UTR CCA 90 bp GTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCTGGGGGCTGGAGAGAACCTTCCTCCTTCCAAGGTaGGAGTCCCAAGAAAGTGTG +
Preference number: 2 (lower is better)
Translates to: VHNEGARVTRRTWGLERTFLLPR*ESQESV
Trigger: CACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAA...GGTTCTCTCCAGCCCCCAGGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
3UTR-3UTR CCA 90 bp AGGAGGGATGCAAGGTCTCTGGTGCCCAGGTCACCAGCCCAGGCTGGGCCAAGGTTCCTCCTTCCAAGGTaGGAGTCCCAAGAAAGTGTG +
Preference number: 2 (lower is better)
Translates to: RRDARSLVPRSPAQAGPRFLLPR*ESQESV
Trigger: CACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAA...CCTTGGCCCAGCCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCATCCCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
3UTR-3UTR CCA 90 bp TCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGAGCTCCTGTGCTCTGCTGGGCTaGGGCAGCCCCCTTCTGTTT +
Preference number: 2 (lower is better)
Translates to: STWGLPSVPPPASVDGSSCALLG*GSPLLF
Trigger: AAACAGAAGGGGGCTGCCCCAGCCCAGCAGAGCACA...GGAGCTCCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
3UTR-3UTR CCA 90 bp AGGAGGGATGCAAGGTCTCTGGTGCCCAGGTCACCAGCCCAGGCTGGGCCAAGGTCCTGCATCTGTGGATaGGAGCTCCAGAAACTCTGT +
Preference number: 2 (lower is better)
Translates to: RRDARSLVPRSPAQAGPRSCICG*ELQKLC
Trigger: ACAGAGTTTCTGGAGCTCCCATCCACAGATGCAGGA...CCTTGGCCCAGCCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCATCCCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
3UTR-3UTR CCA 90 bp GGGATGCAAGGTCTCTGGTGCCCAGGTCACCAGCCCAGGCTGGGCCAAGGGTTTTCATTATTGCTGATTTaGGGCCTGGGTCTCAGGGCG +
Preference number: 2 (lower is better)
Translates to: GMQGLWCPGHQPRLGQGFSLLLI*GLGLRA
Trigger: CGCCCTGAGACCCAGGCCCCAAATCAGCAATAATGA...AAACCCTTGGCCCAGCCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCATCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
3UTR-3UTR CCA 90 bp ACAGGGTCTGGTACACTGTCTTCTGCTTCCCGTCAGAGCTGGGGCTGCTGGGACGTCACCTGTGGACATTaGCAGGACCAGCGTAGGTGC +
Preference number: 2 (lower is better)
Translates to: TGSGTLSSASRQSWGCWDVTCGH*QDQRRC
Trigger: GCACCTACGCTGGTCCTGCCAATGTCCACAGGTGAC...GTCCCAGCAGCCCCAGCTCTGACGGGAAGCAGAAGACAGTGTACCAGACCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433183.2
3UTR-3UTR TCA 90 bp AGGAGGGATGCAAGGTCTCTGGTGCCCAGGTCACCAGCCCAGGCTGGGCCAAGGAGCGGTCTGGCTTCCTaGTGTCTTAAAAATAAGGGG +
Preference number: 2 (lower is better)
Translates to: RRDARSLVPRSPAQAGPRSGLAS*CLKNKG
Trigger: CCCCTTATTTTTAAGACATCAGGAAGCCAGACCGCT...CCTTGGCCCAGCCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCATCCCTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
3UTR-3UTR GCA 90 bp TCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGAGCTCCAGGTGGGCCAGGCTGTaGAGGCGCCTGTATTTGTTG +
Preference number: 2 (lower is better)
Translates to: STWGLPSVPPPASVDGSSRWARL*RRLYLL
Trigger: CAACAAATACAGGCGCCTGCACAGCCTGGCCCACCT...GGAGCTCCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
3UTR-3UTR CCA 90 bp CCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAGCATTAATGAACAGGTaGGCCAGGCTGTGCAGGCGC +
Preference number: 2 (lower is better)
Translates to: PGQPFLLPRWESQESVGRALMNR*ARLCRR
Trigger: GCGCCTGCACAGCCTGGCCCACCTGTTCATTAATGC...TCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
3UTR-3UTR CCA 90 bp GGGCCAAGGGTTTGTTCATTATTGCTGATTTGGGGCCTGGGTCTCAGGGCGGGGCTGAGTTGTGGTAACTaGGGCAGGGGTTCCGGTAGG +
Preference number: 2 (lower is better)
Translates to: GPRVCSLLLIWGLGLRAGLSCGN*GRGSGR
Trigger: CCTACCGGAACCCCTGCCCCAGTTACCACAACTCAG...CCCCGCCCTGAGACCCAGGCCCCAAATCAGCAATAATGAACAAACCCTTGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
3UTR-3UTR CCA 90 bp TCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGAGCTCCAGTTCCTCCCTGGGTTaGGGGCTGGTGATTTGCGCA +
Preference number: 2 (lower is better)
Translates to: STWGLPSVPPPASVDGSSSSSLG*GLVICA
Trigger: TGCGCAAATCACCAGCCCCCAACCCAGGGAGGAACT...GGAGCTCCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
3UTR-3UTR CCA 90 bp CAGGTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCTGGGGGCTGGAGAGATATTTGTTGCAAGGGTaGCGCTCAGAAGATGTTGGG +
Preference number: 2 (lower is better)
Translates to: QVHNEGARVTRRTWGLERYLLQG*RSEDVG
Trigger: CCCAACATCTTCTGAGCGCCACCCTTGCAACAAATA...TCTCTCCAGCCCCCAGGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGACCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452656.5
3UTR CAA 90 bp TTGCAAGGGTGGCGCTCAGAAGATGTTGGGGCACATATGCCAGTCTaGCTTCTCCTTGGCCTCCCAGTAGCCGCCCTTGTACACACAGGC +
Preference number: 2 (lower is better)
Translates to: LQGWRSEDVGAHMPV*LLLGLPVAALVHTG
Trigger: GCCTGTGTGTACAAGGGCGGCTACTGGGAGGCCAAGGAGAAGCAAGACTGGCATATGTGCCCCAACATCTTCTGAGCGCCACCCTTGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452656.5
3UTR-3UTR TCA 90 bp GGGATGCAAGGTCTCTGGTGCCCAGGTCACCAGCCCAGGCTGGGCCAAGGGTTTAGCGGTCTGGCTTCCTaGTGTCTTAAAAATAAGGGG +
Preference number: 2 (lower is better)
Translates to: GMQGLWCPGHQPRLGQGFSGLAS*CLKNKG
Trigger: CCCCTTATTTTTAAGACATCAGGAAGCCAGACCGCT...AAACCCTTGGCCCAGCCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCATCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
3UTR-3UTR GCA 90 bp CTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGGCTCCAGAAACTCTGTaGTCTGCTGGGCTGGGGCAG +
Preference number: 2 (lower is better)
Translates to: LKSTWGLPSVPPPASVDGAPETL*SAGLGQ
Trigger: CTGCCCCAGCCCAGCAGAGCACAGAGTTTCTGGAGC...CCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
3UTR-3UTR GCA 90 bp CCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGAGGCCAGGGACTGCTaGCCTCAAATCCACATGGGG +
Preference number: 2 (lower is better)
Translates to: PQIHMGVTISTPSCICGWEARDC*PQIHMG
Trigger: CCCCATGTGGATTTGAGGGCAGCAGTCCCTGGCCTC...CCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
3UTR-3UTR CCA 90 bp CCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGGGAAATAGGAAGGGCTaGGAATGGGCTGGGAGAAAG +
Preference number: 2 (lower is better)
Translates to: PRSALPPSKVGVPRKCGEGNRKG*EWAGRK
Trigger: CTTTCTCCCAGCCCATTCCCAGCCCTTCCTATTTCC...CTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
3UTR-3UTR GCA 90 bp CTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGGGTGAGGCCAGGGACTaGTGCCCTCAAATCCACATG +
Preference number: 2 (lower is better)
Translates to: LKSTWGLPSVPPPASVDGGEARD*CPQIHM
Trigger: CATGTGGATTTGAGGGCAGCAGTCCCTGGCCTCACC...CCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
3UTR-3UTR CCA 90 bp CTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGGCATTAATGAACAGGTaGGCCAGGCTGTGCAGGCGC +
Preference number: 2 (lower is better)
Translates to: LKSTWGLPSVPPPASVDGALMNR*ARLCRR
Trigger: GCGCCTGCACAGCCTGGCCCACCTGTTCATTAATGC...CCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
3UTR-3UTR CCA 90 bp GCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAGGGCTGGGAATGGGCTaGGAGAAAGACCATTCAGTA +
Preference number: 2 (lower is better)
Translates to: AGENPGQPFLLPRWESQEGLGMG*EKDHSV
Trigger: TACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCC...TTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
3UTR-3UTR CCA 90 bp TCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGAGCTCCGGGCTGGGAATGGGCTaGGAGAAAGACCATTCAGTA +
Preference number: 2 (lower is better)
Translates to: STWGLPSVPPPASVDGSSGLGMG*EKDHSV
Trigger: TACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCC...GGAGCTCCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
3UTR-3UTR CCA 90 bp GGGCCAAGGGTTTGTTCATTATTGCTGATTTGGGGCCTGGGTCTCAGGGCGGGGGGAAATAGGAAGGGCTaGGAATGGGCTGGGAGAAAG +
Preference number: 2 (lower is better)
Translates to: GPRVCSLLLIWGLGLRAGGNRKG*EWAGRK
Trigger: CTTTCTCCCAGCCCATTCCCAGCCCTTCCTATTTCC...CCCCGCCCTGAGACCCAGGCCCCAAATCAGCAATAATGAACAAACCCTTGGCCC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
3UTR-3UTR CCA 90 bp CCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGTTCCTCCTTCCAAGGTaGGAGTCCCAAGAAAGTGTG +
Preference number: 2 (lower is better)
Translates to: PRSALPPSKVGVPRKCGEFLLPR*ESQESV
Trigger: CACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAA...CTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
3UTR-3UTR CCA 90 bp CTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGCTGAGTTGTGGTAACTaGGGCAGGGGTTCCGGTAGG +
Preference number: 2 (lower is better)
Translates to: LKSTWGLPSVPPPASVDGLSCGN*GRGSGR
Trigger: CCTACCGGAACCCCTGCCCCAGTTACCACAACTCAG...CCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
3UTR-3UTR CCA 90 bp GGGCCAAGGGTTTGTTCATTATTGCTGATTTGGGGCCTGGGTCTCAGGGCGGGGGCCCTCAAATCCACATaGGGGTTACCATCAGTACCC +
Preference number: 2 (lower is better)
Translates to: GPRVCSLLLIWGLGLRAGALKST*GLPSVP
Trigger: GGGTACTGATGGTAACCCCCATGTGGATTTGAGGGC...CCCCGCCCTGAGACCCAGGCCCCAAATCAGCAATAATGAACAAACCCTTGGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
3UTR-3UTR TCA 90 bp GCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCAGCGGTCTGGCTTCCTaGTGTCTTAAAAATAAGGGG +
Preference number: 2 (lower is better)
Translates to: ARDCCPQIHMGVTISTPSSGLAS*CLKNKG
Trigger: CCCCTTATTTTTAAGACATCAGGAAGCCAGACCGCT...GGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
3UTR-3UTR GCA 90 bp GATGTCGGCTGCATAATACTGTTCTCTGCCCATGTGTGGACTGAACCCTCCCGAGCACGTAATGGGCCTTaGCCTGGCTGTCACTCACCA +
Preference number: 2 (lower is better)
Translates to: DVGCIILFSAHVWTEPSRARNGP*PGCHSP
Trigger: TGGTGAGTGACAGCCAGGGCAAGGCCCATTACGTGC...TCGGGAGGGTTCAGTCCACACATGGGCAGAGAACAGTATTATGCAGCCGACATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433183.2
3UTR-3UTR GCA 90 bp GGCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCATGTTGGGGCACATATaGCAGTCTTGCTTCTCCTTG +
Preference number: 2 (lower is better)
Translates to: GQGLLPSNPHGGYHQYPLMLGHI*QSCFSL
Trigger: CAAGGAGAAGCAAGACTGGCATATGTGCCCCAACAT...GAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000452656.5
3UTR-3UTR CCA 90 bp CAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAGGGCTGGGAATGGGCTaGGAGAAAGACCATTCAGTA +
Preference number: 2 (lower is better)
Translates to: QVSPSSFQGGSPKKVWGEGLGMG*EKDHSV
Trigger: TACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCC...TTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
3UTR-3UTR CCA 90 bp CTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGGAAATAGGAAGGGCTaGGAATGGGCTGGGAGAAAG +
Preference number: 2 (lower is better)
Translates to: LERTQVSPSSFQGGSPKKGNRKG*EWAGRK
Trigger: CTTTCTCCCAGCCCATTCCCAGCCCTTCCTATTTCC...TTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
3UTR-3UTR CCA 90 bp TCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGAGCTCCTCCTGCATCTGTGGATaGGAGCTCCAGAAACTCTGT +
Preference number: 2 (lower is better)
Translates to: STWGLPSVPPPASVDGSSSCICG*ELQKLC
Trigger: ACAGAGTTTCTGGAGCTCCCATCCACAGATGCAGGA...GGAGCTCCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
3UTR-3UTR GCA 90 bp GCCTTCACACTGGGATGTCGGCTGCATAATACTGTTCTCTGCCCATGTGTGGACCTGCTGGGACTGCTATaGATGACCTTGGAGCACTCC +
Preference number: 2 (lower is better)
Translates to: AFTLGCRLHNTVLCPCVDLLGLL*MTLEHS
Trigger: GGAGTGCTCCAAGGTCATGCATAGCAGTCCCAGCAG...GTCCACACATGGGCAGAGAACAGTATTATGCAGCCGACATCCCAGTGTGAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433183.2
3UTR-3UTR GCA 90 bp GGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAAACACATATGCCAGTCTTaGTTCTCCTTGGCCTCCCAG +
Preference number: 2 (lower is better)
Translates to: GQPFLLPRWESQESVGRKHICQS*FSLASQ
Trigger: CTGGGAGGCCAAGGAGAAGCAAGACTGGCATATGTG...TTTTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452656.5
3UTR-3UTR CCA 90 bp CCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGGGCTGGGAATGGGCTaGGAGAAAGACCATTCAGTA +
Preference number: 2 (lower is better)
Translates to: PQIHMGVTISTPSCICGWGLGMG*EKDHSV
Trigger: TACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCC...CCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
3UTR-3UTR CCA 90 bp GGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAAAGGGCTGGGAATGGGCTaGGAGAAAGACCATTCAGTA +
Preference number: 2 (lower is better)
Translates to: GQPFLLPRWESQESVGRKGLGMG*EKDHSV
Trigger: TACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCC...TTTTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
3UTR-3UTR CCA 90 bp GGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAAAGGAAATAGGAAGGGCTaGGAATGGGCTGGGAGAAAG +
Preference number: 2 (lower is better)
Translates to: GQPFLLPRWESQESVGRKGNRKG*EWAGRK
Trigger: CTTTCTCCCAGCCCATTCCCAGCCCTTCCTATTTCC...TTTTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
3UTR-3UTR CCA 90 bp CTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGGGAAATAGGAAGGGCTaGGAATGGGCTGGGAGAAAG +
Preference number: 2 (lower is better)
Translates to: LKSTWGLPSVPPPASVDGGNRKG*EWAGRK
Trigger: CTTTCTCCCAGCCCATTCCCAGCCCTTCCTATTTCC...CCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
3UTR-3UTR TCA 90 bp TGTGGCAAGAAAGCACACTTGGAAAGCTGTCTGCTAAGTGCGGTACTAAAAATACCGGGCCAGCCGGCCTaGGTTGTGGTAACTGGGGCA +
Preference number: 2 (lower is better)
Translates to: CGKKAHLESCLLSAVLKIPGQPA*VVVTGA
Trigger: TGCCCCAGTTACCACAACTCAGGCCGGCTGGCCCGG...TATTTTTAGTACCGCACTTAGCAGACAGCTTTCCAAGTGTGCTTTCTTGCCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
3UTR-3UTR TCA 90 bp TCACACTGGGATGTCGGCTGCATAATACTGTTCTCTGCCCATGTGTGGACTGAACCACAGCAGCTTGGCTaGCAGGGTCTGGTACACTGT +
Preference number: 2 (lower is better)
Translates to: SHWDVGCIILFSAHVWTEPQQLG*QGLVHC
Trigger: ACAGTGTACCAGACCCTGTCAGCCAAGCTGCTGTGG...TTCAGTCCACACATGGGCAGAGAACAGTATTATGCAGCCGACATCCCAGTGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433183.2
3UTR-3UTR GCA 90 bp GGAAGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCAAGGTGGGCCAGGCTGTaGAGGCGCCTGTATTTGTTG +
Preference number: 2 (lower is better)
Translates to: GRAGNGLGERPFSTKLSARWARL*RRLYLL
Trigger: CAACAAATACAGGCGCCTGCACAGCCTGGCCCACCT...TGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
3UTR-3UTR GCA 90 bp TGTGGCAAGAAAGCACACTTGGAAAGCTGTCTGCTAAGTGCGGTACTAAAAATATGGGGGCTGGTGATTTaGGCAGCCCATGGCCCGGGC +
Preference number: 2 (lower is better)
Translates to: CGKKAHLESCLLSAVLKIWGLVI*AAHGPG
Trigger: GCCCGGGCCATGGGCTGCGCAAATCACCAGCCCCCA...TATTTTTAGTACCGCACTTAGCAGACAGCTTTCCAAGTGTGCTTTCTTGCCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
3UTR-3UTR CCA 90 bp GTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAAAAGGGCTGGGAATGGGCTaGGAGAAAGACCATTCAGTA +
Preference number: 2 (lower is better)
Translates to: VSPSSFQGGSPKKVWGEKGLGMG*EKDHSV
Trigger: TACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCC...TTTTTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
3UTR-3UTR CCA 90 bp CTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGGCGCTCAGAAGATGTTaGGGCACATATGCCAGTCTT +
Preference number: 2 (lower is better)
Translates to: LKSTWGLPSVPPPASVDGALRRC*GTYASL
Trigger: AAGACTGGCATATGTGCCCCAACATCTTCTGAGCGC...CCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000452656.5
3UTR-3UTR CCA 90 bp GATGTCGGCTGCATAATACTGTTCTCTGCCCATGTGTGGACTGAACCCTCCCGATTGGCTGACAGGGTCTaGTACACTGTCTTCTGCTTC +
Preference number: 2 (lower is better)
Translates to: DVGCIILFSAHVWTEPSRLADRV*YTVFCF
Trigger: GAAGCAGAAGACAGTGTACCAGACCCTGTCAGCCAA...TCGGGAGGGTTCAGTCCACACATGGGCAGAGAACAGTATTATGCAGCCGACATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433183.2
3UTR-3UTR TCA 90 bp GGCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCATACCATCGAGGACTTaGTATGTTGAGCTACAAAAT +
Preference number: 2 (lower is better)
Translates to: GQGLLPSNPHGGYHQYPLIPSRT*YVELQN
Trigger: ATTTTGTAGCTCAACATATCAAGTCCTCGATGGTAT...GAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
3UTR-3UTR GCA 90 bp TCACACTGGGATGTCGGCTGCATAATACTGTTCTCTGCCCATGTGTGGACTGAACCTGTGCCTGTCAGTTaGTTTCTGTCCACTGTCCTC +
Preference number: 2 (lower is better)
Translates to: SHWDVGCIILFSAHVWTEPVPVS*FLSTVL
Trigger: GAGGACAGTGGACAGAAAGCAACTGACAGGCACAGG...TTCAGTCCACACATGGGCAGAGAACAGTATTATGCAGCCGACATCCCAGTGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433183.2
3UTR-3UTR TCA 90 bp TCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGAGCTCCATACCATCGAGGACTTaGTATGTTGAGCTACAAAAT +
Preference number: 2 (lower is better)
Translates to: STWGLPSVPPPASVDGSSIPSRT*YVELQN
Trigger: ATTTTGTAGCTCAACATATCAAGTCCTCGATGGTAT...GGAGCTCCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
3UTR-3UTR CCA 90 bp GGCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCACTAAACATCATGGCTaGAAAGAAATGGAGATCATT +
Preference number: 2 (lower is better)
Translates to: GQGLLPSNPHGGYHQYPLTKHHG*KEMEII
Trigger: AATGATCTCCATTTCTTTCCAGCCATGATGTTTAGT...GAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
3UTR-3UTR CCA 90 bp GTTTCACATTTATTTACTGTTCGGTGTCTGCCTTCACACTGGGATGTCGGCTGCTCTTCCACAGCAGCTTaGCTGACAGGGTCTGGTACA +
Preference number: 2 (lower is better)
Translates to: VSHLFTVRCLPSHWDVGCSSTAA*LTGSGT
Trigger: TGTACCAGACCCTGTCAGCCAAGCTGCTGTGGAAGA...GCAGCCGACATCCCAGTGTGAAGGCAGACACCGAACAGTAAATAAATGTGAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433183.2
3UTR-3UTR GCA 90 bp TACCATCGAGGACTTGATATGTTGAGCTACAAAATTCTCCCAACTCAAAGCGGTAGGTGGGCCAGGCTGTaGAGGCGCCTGTATTTGTTG +
Preference number: 2 (lower is better)
Translates to: YHRGLDMLSYKILPTQSGRWARL*RRLYLL
Trigger: CAACAAATACAGGCGCCTGCACAGCCTGGCCCACCT...ACCGCTTTGAGTTGGGAGAATTTTGTAGCTCAACATATCAAGTCCTCGATGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
3UTR-3UTR TCA 90 bp CTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGATACCATCGAGGACTTaGTATGTTGAGCTACAAAAT +
Preference number: 2 (lower is better)
Translates to: LKSTWGLPSVPPPASVDGIPSRT*YVELQN
Trigger: ATTTTGTAGCTCAACATATCAAGTCCTCGATGGTAT...CCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
3UTR-3UTR TCA 90 bp TTTGATAGTTTCACATTTATTTACTGTTCGGTGTCTGCCTTCACACTGGGATGTTGCCCATGTGTGGACTaGACCCTCCCGACCTCCTGT +
Preference number: 2 (lower is better)
Translates to: FDSFTFIYCSVSAFTLGCCPCVD*TLPTSC
Trigger: ACAGGAGGTCGGGAGGGTTCAGTCCACACATGGGCA...ACATCCCAGTGTGAAGGCAGACACCGAACAGTAAATAAATGTGAAACTATCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433183.2
3UTR-3UTR CCA 90 bp TTTGATAGTTTCACATTTATTTACTGTTCGGTGTCTGCCTTCACACTGGGATGTCACTCCTGTCACCTGTaGACATTGGCAGGACCAGCG +
Preference number: 2 (lower is better)
Translates to: FDSFTFIYCSVSAFTLGCHSCHL*TLAGPA
Trigger: CGCTGGTCCTGCCAATGTCCACAGGTGACAGGAGTG...ACATCCCAGTGTGAAGGCAGACACCGAACAGTAAATAAATGTGAAACTATCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433183.2
3UTR TCA 72 bp CCGGTAGGGCCCAGGTCCATAATGAAGGGGCACGGGTaGCCCGGCGCACCTGGGGGCTGGAGAGAACCCAGG +
Preference number: 3 (lower is better)
Translates to: PVGPRSIMKGHG*PGAPGGWREPR
Trigger: CCTGGGTTCTCTCCAGCCCCCAGGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGACCTGGGCCCTACCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
3UTR CCA 72 bp AGAGGCTCCCTAGGAGGGGCCAGTTCCTCCCTGGGTTaGGGGCTGGTGATTTGCGCAGCCCATGGCCCGGGC +
Preference number: 3 (lower is better)
Translates to: RGSLGGASSSLG*GLVICAAHGPG
Trigger: GCCCGGGCCATGGGCTGCGCAAATCACCAGCCCCCAACCCAGGGAGGAACTGGCCCCTCCTAGGGAGCCTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
3UTR TCA 72 bp GTGATTTGCGCAGCCCATGGCCCGGGCCAGCCGGCCTaGGTTGTGGTAACTGGGGCAGGGGTTCCGGTAGGG +
Preference number: 3 (lower is better)
Translates to: VICAAHGPGQPA*VVVTGAGVPVG
Trigger: CCCTACCGGAACCCCTGCCCCAGTTACCACAACTCAGGCCGGCTGGCCCGGGCCATGGGCTGCGCAAATCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
3UTR CCA 72 bp CTCCCTGGGTTGGGGGCTGGTGATTTGCGCAGCCCATaGCCCGGGCCAGCCGGCCTGAGTTGTGGTAACTGG +
Preference number: 3 (lower is better)
Translates to: LPGLGAGDLRSP*PGPAGLSCGNW
Trigger: CCAGTTACCACAACTCAGGCCGGCTGGCCCGGGCCATGGGCTGCGCAAATCACCAGCCCCCAACCCAGGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
3UTR CCA 72 bp GTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCTaGGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCC +
Preference number: 3 (lower is better)
Translates to: VHNEGARVTRRT*GLERTQVSPSS
Trigger: GGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCCCAGGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
3UTR-3UTR CAA 90 bp AGGAGGGATGCAAGGTCTCTGGTGCCCAGGTCACCAGCCCAGGCTGGGCCAAGGCAGCCCCCTTCTGTTTaGGGCTCTGTGGGGCCTTGG +
Preference number: 3 (lower is better)
Translates to: RRDARSLVPRSPAQAGPRQPPSV*GSVGPW
Trigger: CCAAGGCCCCACAGAGCCCAAAACAGAAGGGGGCTG...CCTTGGCCCAGCCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCATCCCTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
3UTR GCA 72 bp TCCTCCTTCCCTCTCCTTTGCCTGTGGCGGGGCCCCTaGCAGCCCTACTCACGGCAGCGGGTACTTCTTCCA +
Preference number: 3 (lower is better)
Translates to: SSFPLLCLWRGP*QPYSRQRVLLP
Trigger: TGGAAGAAGTACCCGCTGCCGTGAGTAGGGCTGGCAGGGGCCCCGCCACAGGCAAAGGAGAGGGAAGGAGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433183.2
3UTR-3UTR CAA 90 bp GGGATGCAAGGTCTCTGGTGCCCAGGTCACCAGCCCAGGCTGGGCCAAGGGTTTCAGCCCCCTTCTGTTTaGGGCTCTGTGGGGCCTTGG +
Preference number: 3 (lower is better)
Translates to: GMQGLWCPGHQPRLGQGFQPPSV*GSVGPW
Trigger: CCAAGGCCCCACAGAGCCCAAAACAGAAGGGGGCTG...AAACCCTTGGCCCAGCCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCATCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
3UTR-3UTR CAA 90 bp CAGGTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCTGGGGGCTGGAGAGAGCACATATGCCAGTCTaGCTTCTCCTTGGCCTCCCA +
Preference number: 3 (lower is better)
Translates to: QVHNEGARVTRRTWGLERAHMPV*LLLGLP
Trigger: TGGGAGGCCAAGGAGAAGCAAGACTGGCATATGTGC...TCTCTCCAGCCCCCAGGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGACCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452656.5
3UTR GCA 72 bp GTTCATCCCACGAGCCGGACAGCACGTAATGGGCCTTaGCCTGGCTGTCACTCACCACTCCTGTCACCTGTG +
Preference number: 3 (lower is better)
Translates to: VHPTSRTARNGP*PGCHSPLLSPV
Trigger: CACAGGTGACAGGAGTGGTGAGTGACAGCCAGGGCAAGGCCCATTACGTGCTGTCCGGCTCGTGGGATGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433183.2
3UTR CCA 72 bp CAGGCTGGGCCAAGGGTTTGTTCATTATTGCTGATTTaGGGCCTGGGTCTCAGGGCGGGGAGCACCTGCAGG +
Preference number: 3 (lower is better)
Translates to: QAGPRVCSLLLI*GLGLRAGSTCR
Trigger: CCTGCAGGTGCTCCCCGCCCTGAGACCCAGGCCCCAAATCAGCAATAATGAACAAACCCTTGGCCCAGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
3UTR CCA 72 bp AGGGTGAGGCCAGGGACTGCTGCCCTCAAATCCACATaGGGGTTACCATCAGTACCCCCTCCTGCATCTGTG +
Preference number: 3 (lower is better)
Translates to: RVRPGTAALKST*GLPSVPPPASV
Trigger: CACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGCCTCACCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
3UTR-3UTR CAA 90 bp CTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGCAGCCCCCTTCTGTTTaGGGCTCTGTGGGGCCTTGG +
Preference number: 3 (lower is better)
Translates to: LKSTWGLPSVPPPASVDGQPPSV*GSVGPW
Trigger: CCAAGGCCCCACAGAGCCCAAAACAGAAGGGGGCTG...CCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
3UTR TCA 72 bp TCACGGCAGCGGGTACTTCTTCCACAGCAGCTTGGCTaGCAGGGTCTGGTACACTGTCTTCTGCTTCCCGTC +
Preference number: 3 (lower is better)
Translates to: SRQRVLLPQQLG*QGLVHCLLLPV
Trigger: GACGGGAAGCAGAAGACAGTGTACCAGACCCTGTCAGCCAAGCTGCTGTGGAAGAAGTACCCGCTGCCGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433183.2
3UTR GCA 72 bp CTGCCCATGTGTGGACTGAACCCTCCCGACCTCCTGTaGCTGTCAGTTGCTTTCTGTCCACTGTCCTCCTTC +
Preference number: 3 (lower is better)
Translates to: LPMCGLNPPDLL*LSVAFCPLSSF
Trigger: GAAGGAGGACAGTGGACAGAAAGCAACTGACAGGCACAGGAGGTCGGGAGGGTTCAGTCCACACATGGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433183.2
3UTR CCA 72 bp GGGTACTTCTTCCACAGCAGCTTGGCTGACAGGGTCTaGTACACTGTCTTCTGCTTCCCGTCAGAGCTGGGG +
Preference number: 3 (lower is better)
Translates to: GYFFHSSLADRV*YTVFCFPSELG
Trigger: CCCCAGCTCTGACGGGAAGCAGAAGACAGTGTACCAGACCCTGTCAGCCAAGCTGCTGTGGAAGAAGTACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433183.2
3UTR CCA 72 bp GCCAGGCTGTGCAGGCGCCTGTATTTGTTGCAAGGGTaGCGCTCAGAAGATGTTGGGGCACATATGCCAGTC +
Preference number: 3 (lower is better)
Translates to: ARLCRRLYLLQG*RSEDVGAHMPV
Trigger: GACTGGCATATGTGCCCCAACATCTTCTGAGCGCCACCCTTGCAACAAATACAGGCGCCTGCACAGCCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452656.5
3UTR CCA 72 bp AGATGTTGGGGCACATATGCCAGTCTTGCTTCTCCTTaGCCTCCCAGTAGCCGCCCTTGTACACACAGGCCA +
Preference number: 3 (lower is better)
Translates to: RCWGTYASLASP*PPSSRPCTHRP
Trigger: TGGCCTGTGTGTACAAGGGCGGCTACTGGGAGGCCAAGGAGAAGCAAGACTGGCATATGTGCCCCAACATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452656.5
3UTR-3UTR CAA 90 bp GGGATGCAAGGTCTCTGGTGCCCAGGTCACCAGCCCAGGCTGGGCCAAGGGTTTCGAGGACTTGATATGTaGAGCTACAAAATTCTCCCA +
Preference number: 3 (lower is better)
Translates to: GMQGLWCPGHQPRLGQGFRGLDM*SYKILP
Trigger: TGGGAGAATTTTGTAGCTCAACATATCAAGTCCTCG...AAACCCTTGGCCCAGCCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
3UTR GCA 72 bp CAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTaGATCTGTGGATGGGAGCTCCAGAAACTCTGTGCT +
Preference number: 3 (lower is better)
Translates to: QIHMGVTISTPS*ICGWELQKLCA
Trigger: AGCACAGAGTTTCTGGAGCTCCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGATTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
3UTR-3UTR CAA 90 bp GGGATGCAAGGTCTCTGGTGCCCAGGTCACCAGCCCAGGCTGGGCCAAGGGTTTCCATTCAGTACTAAATaGAGTGCATTAATGAACAGG +
Preference number: 3 (lower is better)
Translates to: GMQGLWCPGHQPRLGQGFPFSTK*SALMNR
Trigger: CCTGTTCATTAATGCACTCAATTTAGTACTGAATGG...AAACCCTTGGCCCAGCCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCATCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
3UTR GCA 72 bp AAATTGAGTGCATTAATGAACAGGTGGGCCAGGCTGTaGAGGCGCCTGTATTTGTTGCAAGGGTGGCGCTCA +
Preference number: 3 (lower is better)
Translates to: KLSALMNRWARL*RRLYLLQGWRS
Trigger: TGAGCGCCACCCTTGCAACAAATACAGGCGCCTGCACAGCCTGGCCCACCTGTTCATTAATGCACTCAATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452656.5
3UTR CCA 72 bp CCTGTATTTGTTGCAAGGGTGGCGCTCAGAAGATGTTaGGGCACATATGCCAGTCTTGCTTCTCCTTGGCCT +
Preference number: 3 (lower is better)
Translates to: PVFVARVALRRC*GTYASLASPWP
Trigger: AGGCCAAGGAGAAGCAAGACTGGCATATGTGCCCCAACATCTTCTGAGCGCCACCCTTGCAACAAATACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452656.5
3UTR-3UTR CAA 90 bp CCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGCCATTCAGTACTAAATaGAGTGCATTAATGAACAGG +
Preference number: 3 (lower is better)
Translates to: PRSALPPSKVGVPRKCGEPFSTK*SALMNR
Trigger: CCTGTTCATTAATGCACTCAATTTAGTACTGAATGG...CTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
3UTR-3UTR CAA 90 bp GGCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCCATTCAGTACTAAATaGAGTGCATTAATGAACAGG +
Preference number: 3 (lower is better)
Translates to: GQGLLPSNPHGGYHQYPLPFSTK*SALMNR
Trigger: CCTGTTCATTAATGCACTCAATTTAGTACTGAATGG...GAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
3UTR-3UTR CAA 90 bp GCCTTCACACTGGGATGTCGGCTGCATAATACTGTTCTCTGCCCATGTGTGGACCTGCTATGCATGACCTaGGAGCACTCCATTTGTTCA +
Preference number: 3 (lower is better)
Translates to: AFTLGCRLHNTVLCPCVDLLCMT*EHSICS
Trigger: TGAACAAATGGAGTGCTCCAAGGTCATGCATAGCAG...GTCCACACATGGGCAGAGAACAGTATTATGCAGCCGACATCCCAGTGTGAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433183.2
3UTR GCA 72 bp ACTGTTCGGTGTCTGCCTTCACACTGGGATGTCGGCTaGATAATACTGTTCTCTGCCCATGTGTGGACTGAA +
Preference number: 3 (lower is better)
Translates to: TVRCLPSHWDVG*IILFSAHVWTE
Trigger: TTCAGTCCACACATGGGCAGAGAACAGTATTATGCAGCCGACATCCCAGTGTGAAGGCAGACACCGAACAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433183.2
3UTR-3UTR CAA 90 bp GGGCCAAGGGTTTGTTCATTATTGCTGATTTGGGGCCTGGGTCTCAGGGCGGGGCCATTCAGTACTAAATaGAGTGCATTAATGAACAGG +
Preference number: 3 (lower is better)
Translates to: GPRVCSLLLIWGLGLRAGPFSTK*SALMNR
Trigger: CCTGTTCATTAATGCACTCAATTTAGTACTGAATGG...CCCCGCCCTGAGACCCAGGCCCCAAATCAGCAATAATGAACAAACCCTTGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
3UTR-3UTR CAA 90 bp GCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAACCATTCAGTACTAAATaGAGTGCATTAATGAACAGG +
Preference number: 3 (lower is better)
Translates to: AGENPGQPFLLPRWESQEPFSTK*SALMNR
Trigger: CCTGTTCATTAATGCACTCAATTTAGTACTGAATGG...TTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
3UTR-3UTR CAA 90 bp CCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGCGAGGACTTGATATGTaGAGCTACAAAATTCTCCCA +
Preference number: 3 (lower is better)
Translates to: PQIHMGVTISTPSCICGWRGLDM*SYKILP
Trigger: TGGGAGAATTTTGTAGCTCAACATATCAAGTCCTCG...CCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
3UTR TCA 72 bp GTGGGCAGCTCAGATACCATCGAGGACTTGATATGTTaGGCTACAAAATTCTCCCAACTCAAAGCGGTCTGG +
Preference number: 3 (lower is better)
Translates to: VGSSDTIEDLIC*ATKFSQLKAVW
Trigger: CCAGACCGCTTTGAGTTGGGAGAATTTTGTAGCTCAACATATCAAGTCCTCGATGGTATCTGAGCTGCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
3UTR TCA 72 bp GTGGGGGTGTGGGCAGCTCAGATACCATCGAGGACTTaGTATGTTGAGCTACAAAATTCTCCCAACTCAAAG +
Preference number: 3 (lower is better)
Translates to: VGVWAAQIPSRT*YVELQNSPNSK
Trigger: CTTTGAGTTGGGAGAATTTTGTAGCTCAACATATCAAGTCCTCGATGGTATCTGAGCTGCCCACACCCCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
3UTR CCA 72 bp CCATTCAGTACTAAATTGAGTGCATTAATGAACAGGTaGGCCAGGCTGTGCAGGCGCCTGTATTTGTTGCAA +
Preference number: 3 (lower is better)
Translates to: PFSTKLSALMNR*ARLCRRLYLLQ
Trigger: TTGCAACAAATACAGGCGCCTGCACAGCCTGGCCCACCTGTTCATTAATGCACTCAATTTAGTACTGAATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
3UTR-3UTR CAA 90 bp TTTGATAGTTTCACATTTATTTACTGTTCGGTGTCTGCCTTCACACTGGGATGTTTCTTCCACAGCAGCTaGGCTGACAGGGTCTGGTAC +
Preference number: 3 (lower is better)
Translates to: FDSFTFIYCSVSAFTLGCFFHSS*ADRVWY
Trigger: GTACCAGACCCTGTCAGCCAAGCTGCTGTGGAAGAA...ACATCCCAGTGTGAAGGCAGACACCGAACAGTAAATAAATGTGAAACTATCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433183.2
3UTR CCA 72 bp TCACATTTATTTACTGTTCGGTGTCTGCCTTCACACTaGGATGTCGGCTGCATAATACTGTTCTCTGCCCAT +
Preference number: 3 (lower is better)
Translates to: SHLFTVRCLPSH*DVGCIILFSAH
Trigger: ATGGGCAGAGAACAGTATTATGCAGCCGACATCCCAGTGTGAAGGCAGACACCGAACAGTAAATAAATGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433183.2
3UTR-3UTR CAA 90 bp TACCATCGAGGACTTGATATGTTGAGCTACAAAATTCTCCCAACTCAAAGCGGTCTTGCCAGGACACTTTaGTGGCAAGAAAGCACACTT +
Preference number: 3 (lower is better)
Translates to: YHRGLDMLSYKILPTQSGLARTL*WQESTL
Trigger: AAGTGTGCTTTCTTGCCACAAAAGTGTCCTGGCAAG...ACCGCTTTGAGTTGGGAGAATTTTGTAGCTCAACATATCAAGTCCTCGATGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp AGTTCCTCCCTGGGTTGGGGGCTGGTGATTTGCGCAGCCCATGGCCCGGGCCAGATGAAGGGGCACGGGTaGCCCGGCGCACCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: SSSLGWGLVICAAHGPGQMKGHG*PGAPGG
Trigger: GCCCCCAGGTGCGCCGGGTCACCCGTGCCCCTTCAT...CTGGCCCGGGCCATGGGCTGCGCAAATCACCAGCCCCCAACCCAGGGAGGAACT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp CAGGTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCTGGGGGCTGGAGAGAATGAAGGGGCACGGGTaGCCCGGCGCACCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: QVHNEGARVTRRTWGLERMKGHG*PGAPGG
Trigger: GCCCCCAGGTGCGCCGGGTCACCCGTGCCCCTTCAT...TCTCTCCAGCCCCCAGGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGACCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp GTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCTGGGGGCTGGAGAGAACCATGAAGGGGCACGGGTaGCCCGGCGCACCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: VHNEGARVTRRTWGLERTMKGHG*PGAPGG
Trigger: GCCCCCAGGTGCGCCGGGTCACCCGTGCCCCTTCAT...GGTTCTCTCCAGCCCCCAGGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp AGTTCCTCCCTGGGTTGGGGGCTGGTGATTTGCGCAGCCCATGGCCCGGGCCAGAGGGCGGGGAGCACCTaGAGGCCCTGCCTTCCAGCC +
Preference number: 4 (lower is better)
Translates to: SSSLGWGLVICAAHGPGQRAGST*RPCLPA
Trigger: GGCTGGAAGGCAGGGCCTGCAGGTGCTCCCCGCCCT...CTGGCCCGGGCCATGGGCTGCGCAAATCACCAGCCCCCAACCCAGGGAGGAACT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp AGTTCCTCCCTGGGTTGGGGGCTGGTGATTTGCGCAGCCCATGGCCCGGGCCAGCGGGTCCCGGGGGCTTaGACGGACGCGTGCACAGCT +
Preference number: 4 (lower is better)
Translates to: SSSLGWGLVICAAHGPGQRVPGA*TDACTA
Trigger: AGCTGTGCACGCGTCCGTGCAAGCCCCCGGGACCCG...CTGGCCCGGGCCATGGGCTGCGCAAATCACCAGCCCCCAACCCAGGGAGGAACT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000437268.6
CDS-3UTR CCA 90 bp GGTTCCGGTAGGGCCCAGGTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCCGGCCAGGGGCACTGTaGAAGGCCCGCTCGAGGCTG +
Preference number: 4 (lower is better)
Translates to: GSGRAQVHNEGARVTRRTRPGAL*KARSRL
Trigger: CAGCCTCGAGCGGGCCTTCCACAGTGCCCCTGGCCG...GGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGACCTGGGCCCTACCGGAACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGTTCCGGTAGGGCCCAGGTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCGATTTGCGCAGCCCATaGCCCGGGCCAGCCGGCCTG +
Preference number: 4 (lower is better)
Translates to: GSGRAQVHNEGARVTRRTDLRSP*PGPAGL
Trigger: CAGGCCGGCTGGCCCGGGCCATGGGCTGCGCAAATC...GGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGACCTGGGCCCTACCGGAACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp GGGCCAGCCGGCCTGAGTTGTGGTAACTGGGGCAGGGGTTCCGGTAGGGCCCAGTGGGTTGGGGGCTGGTaGTTTGCGCAGCCCATGGCC +
Preference number: 4 (lower is better)
Translates to: GPAGLSCGNWGRGSGRAQWVGGW*FAQPMA
Trigger: GGCCATGGGCTGCGCAAATCACCAGCCCCCAACCCA...CTGGGCCCTACCGGAACCCCTGCCCCAGTTACCACAACTCAGGCCGGCTGGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp AGTTCCTCCCTGGGTTGGGGGCTGGTGATTTGCGCAGCCCATGGCCCGGGCCAGTGGGGGCTGGTGATTTaGGCAGCCCATGGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: SSSLGWGLVICAAHGPGQWGLVI*AAHGPG
Trigger: GCCCGGGCCATGGGCTGCGCAAATCACCAGCCCCCA...CTGGCCCGGGCCATGGGCTGCGCAAATCACCAGCCCCCAACCCAGGGAGGAACT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp CAGGTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCTGGGGGCTGGAGAGAAGGGCGGGGAGCACCTaGAGGCCCTGCCTTCCAGCC +
Preference number: 4 (lower is better)
Translates to: QVHNEGARVTRRTWGLERRAGST*RPCLPA
Trigger: GGCTGGAAGGCAGGGCCTGCAGGTGCTCCCCGCCCT...TCTCTCCAGCCCCCAGGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGACCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GGACATTGGCAGGACCAGCGTAGGTGCAGACTCTGCCCTGGGCCCCCTGGGGTGCGTAGGTGCAGACTCTaGCCTGGGCCCCCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: GHWQDQRRCRLCPGPPGVRRCRL*PGPPGV
Trigger: CACCCCAGGGGGCCCAGGGCAGAGTCTGCACCTACG...CACCCCAGGGGGCCCAGGGCAGAGTCTGCACCTACGCTGGTCCTGCCAATGTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000433183.2
CDS-3UTR CCA 90 bp CAGGTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCTGGGGGCTGGAGAGACGGCCAGGGGCACTGTaGAAGGCCCGCTCGAGGCTG +
Preference number: 4 (lower is better)
Translates to: QVHNEGARVTRRTWGLERRPGAL*KARSRL
Trigger: CAGCCTCGAGCGGGCCTTCCACAGTGCCCCTGGCCG...TCTCTCCAGCCCCCAGGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGACCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CAGGTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCTGGGGGCTGGAGAGAAGCTCTTGGAGGGGTTaGCCGGCCGGCCAGGGGCAC +
Preference number: 4 (lower is better)
Translates to: QVHNEGARVTRRTWGLERSSWRG*PAGQGH
Trigger: GTGCCCCTGGCCGGCCGGCCAACCCCTCCAAGAGCT...TCTCTCCAGCCCCCAGGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGACCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGTTCCGGTAGGGCCCAGGTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCTTCTCCATCAGCCGCTaGTCGGGCCGCAGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: GSGRAQVHNEGARVTRRTFSISR*SGRRRL
Trigger: CAGCCGCCTGCGGCCCGACCAGCGGCTGATGGAGAA...GGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGACCTGGGCCCTACCGGAACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp AGTTCCTCCCTGGGTTGGGGGCTGGTGATTTGCGCAGCCCATGGCCCGGGCCAGGGCGCACCTGGGGGCTaGAGAGAACCCAGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: SSSLGWGLVICAAHGPGQGAPGG*REPRSA
Trigger: GGCTGACCTGGGTTCTCTCCAGCCCCCAGGTGCGCC...CTGGCCCGGGCCATGGGCTGCGCAAATCACCAGCCCCCAACCCAGGGAGGAACT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp AGGAGGGATGCAAGGTCTCTGGTGCCCAGGTCACCAGCCCAGGCTGGGCCAAGGGATTTGCGCAGCCCATaGCCCGGGCCAGCCGGCCTG +
Preference number: 4 (lower is better)
Translates to: RRDARSLVPRSPAQAGPRDLRSP*PGPAGL
Trigger: CAGGCCGGCTGGCCCGGGCCATGGGCTGCGCAAATC...CCTTGGCCCAGCCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCATCCCTCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCTGGGGGCTGGAGAGAACCGATTTGCGCAGCCCATaGCCCGGGCCAGCCGGCCTG +
Preference number: 4 (lower is better)
Translates to: VHNEGARVTRRTWGLERTDLRSP*PGPAGL
Trigger: CAGGCCGGCTGGCCCGGGCCATGGGCTGCGCAAATC...GGTTCTCTCCAGCCCCCAGGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp AGTTCCTCCCTGGGTTGGGGGCTGGTGATTTGCGCAGCCCATGGCCCGGGCCAGCCTCCTCGTGCTCGTTaGGGGTCAGGGCCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: SSSLGWGLVICAAHGPGQPPRAR*GSGPAL
Trigger: CAGAGCTGGCCCTGACCCTCAACGAGCACGAGGAGG...CTGGCCCGGGCCATGGGCTGCGCAAATCACCAGCCCCCAACCCAGGGAGGAACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp CAGGTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCTGGGGGCTGGAGAGACCGGGCCAGCCGGCCTaGGTTGTGGTAACTGGGGCA +
Preference number: 4 (lower is better)
Translates to: QVHNEGARVTRRTWGLERPGQPA*VVVTGA
Trigger: TGCCCCAGTTACCACAACTCAGGCCGGCTGGCCCGG...TCTCTCCAGCCCCCAGGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGACCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp AGTTCCTCCCTGGGTTGGGGGCTGGTGATTTGCGCAGCCCATGGCCCGGGCCAGGGGTGGTGGCTCACCTaGTCACAGAGGGAGCGCAGG +
Preference number: 4 (lower is better)
Translates to: SSSLGWGLVICAAHGPGQGWWLT*SQRERR
Trigger: CCTGCGCTCCCTCTGTGAGCAGGTGAGCCACCACCC...CTGGCCCGGGCCATGGGCTGCGCAAATCACCAGCCCCCAACCCAGGGAGGAACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GGTTCCGGTAGGGCCCAGGTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCGCTACGCCCTCCTCGTaGTCGTTGAGGGTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: GSGRAQVHNEGARVTRRTATPSS*SLRVRA
Trigger: GGCCCTGACCCTCAACGAGCACGAGGAGGGCGTAGC...GGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGACCTGGGCCCTACCGGAACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp TGGGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCCGCCGCGACAGGCGCTaGTTCTCCTCCAGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: WGLERTQVSPSSFQGGSPRRDRR*FSSSRC
Trigger: GCAGCGGCTGGAGGAGAAGCAGCGCCTGTCGCGGCG...GGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp AGGAGGGATGCAAGGTCTCTGGTGCCCAGGTCACCAGCCCAGGCTGGGCCAAGGTCTGTGGGTCGCTCCTaGGGCCGCCAGAAGCGGTGG +
Preference number: 4 (lower is better)
Translates to: RRDARSLVPRSPAQAGPRSVGRS*GRQKRW
Trigger: CCACCGCTTCTGGCGGCCGCAGGAGCGACCCACAGA...CCTTGGCCCAGCCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCATCCCTCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403222.7
ENST00000407373.5
CDS-3UTR GCA 90 bp GTCCTCCTTCCCTCTCCTTTGCCTGTGGCGGGGCCCCTGCCAGCCCTACTCACGCTGGGCCCCCTGGGGTaGTTAGAGGTGGCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: VLLPSPLPVAGPLPALLTLGPLG*LEVAGP
Trigger: AGGACCAGCCACCTCTAAGCACCCCAGGGGGCCCAG...CGTGAGTAGGGCTGGCAGGGGCCCCGCCACAGGCAAAGGAGAGGGAAGGAGGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000433183.2
CDS-3UTR CCA 90 bp GGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAACCCGGCGCCGCCGTGTaGCACGACAGGCAGGGGACA +
Preference number: 4 (lower is better)
Translates to: GAGENPGQPFLLPRWESQPGAAV*HDRQGT
Trigger: TGTCCCCTGCCTGTCGTGCCACACGGCGGCGCCGGG...TTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332585.11
CDS-3UTR CCA 90 bp GGGCCAGCCGGCCTGAGTTGTGGTAACTGGGGCAGGGGTTCCGGTAGGGCCCAGCTCGCTCTTGTCGGCTaGGGTGGTAGCCTCGTCGTC +
Preference number: 4 (lower is better)
Translates to: GPAGLSCGNWGRGSGRAQLALVG*GGSLVV
Trigger: GACGACGAGGCTACCACCCCAGCCGACAAGAGCGAG...CTGGGCCCTACCGGAACCCCTGCCCCAGTTACCACAACTCAGGCCGGCTGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000437268.6
CDS-3UTR CCA 90 bp GGGCCAGCCGGCCTGAGTTGTGGTAACTGGGGCAGGGGTTCCGGTAGGGCCCAGTCTGTCAGGGAGCGCTaGAGTGCAGCGCCGTGCTTG +
Preference number: 4 (lower is better)
Translates to: GPAGLSCGNWGRGSGRAQSVRER*SAAPCL
Trigger: CAAGCACGGCGCTGCACTCCAGCGCTCCCTGACAGA...CTGGGCCCTACCGGAACCCCTGCCCCAGTTACCACAACTCAGGCCGGCTGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000437268.6
CDS-3UTR CCA 90 bp GGGATGCAAGGTCTCTGGTGCCCAGGTCACCAGCCCAGGCTGGGCCAAGGGTTTCGGCCAGGGGCACTGTaGAAGGCCCGCTCGAGGCTG +
Preference number: 4 (lower is better)
Translates to: GMQGLWCPGHQPRLGQGFRPGAL*KARSRL
Trigger: CAGCCTCGAGCGGGCCTTCCACAGTGCCCCTGGCCG...AAACCCTTGGCCCAGCCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCATCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGGATGCAAGGTCTCTGGTGCCCAGGTCACCAGCCCAGGCTGGGCCAAGGGTTTAGCTCTTGGAGGGGTTaGCCGGCCGGCCAGGGGCAC +
Preference number: 4 (lower is better)
Translates to: GMQGLWCPGHQPRLGQGFSSWRG*PAGQGH
Trigger: GTGCCCCTGGCCGGCCGGCCAACCCCTCCAAGAGCT...AAACCCTTGGCCCAGCCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCATCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp AGGAGGGATGCAAGGTCTCTGGTGCCCAGGTCACCAGCCCAGGCTGGGCCAAGGCAGGCGGCTGTCGGTTaGCGCTACGCCCTCCTCGTG +
Preference number: 4 (lower is better)
Translates to: RRDARSLVPRSPAQAGPRQAAVG*RYALLV
Trigger: CACGAGGAGGGCGTAGCGCCAACCGACAGCCGCCTG...CCTTGGCCCAGCCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCATCCCTCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCTGGGGGCTGGAGAGAACCTTCTCCATCAGCCGCTaGTCGGGCCGCAGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: VHNEGARVTRRTWGLERTFSISR*SGRRRL
Trigger: CAGCCGCCTGCGGCCCGACCAGCGGCTGATGGAGAA...GGTTCTCTCCAGCCCCCAGGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp AGGAGGGATGCAAGGTCTCTGGTGCCCAGGTCACCAGCCCAGGCTGGGCCAAGGGTGACCCGGCGCACCTaGGGGCTGGAGAGAACCCAG +
Preference number: 4 (lower is better)
Translates to: RRDARSLVPRSPAQAGPRVTRRT*GLERTQ
Trigger: CTGGGTTCTCTCCAGCCCCCAGGTGCGCCGGGTCAC...CCTTGGCCCAGCCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCATCCCTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp AGGAGGGATGCAAGGTCTCTGGTGCCCAGGTCACCAGCCCAGGCTGGGCCAAGGGAGGGGCTGGGTCAGTaGCCATGGTGGTCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: RRDARSLVPRSPAQAGPREGLGQ*PWWSSP
Trigger: GGGGCTGGACCACCATGGCCACTGACCCAGCCCCTC...CCTTGGCCCAGCCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCATCCCTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGGCCAGCCGGCCTGAGTTGTGGTAACTGGGGCAGGGGTTCCGGTAGGGCCCAGACCTCCCGGGATCCCTaGGTAGGCTGGCAGTCTGTG +
Preference number: 4 (lower is better)
Translates to: GPAGLSCGNWGRGSGRAQTSRDP*VGWQSV
Trigger: CACAGACTGCCAGCCTACCCAGGGATCCCGGGAGGT...CTGGGCCCTACCGGAACCCCTGCCCCAGTTACCACAACTCAGGCCGGCTGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407373.5
CDS-3UTR CCA 90 bp GGGATGCAAGGTCTCTGGTGCCCAGGTCACCAGCCCAGGCTGGGCCAAGGGTTTGGCCGCCAGAAGCGGTaGCCCCAAGTGGCCGCCTCA +
Preference number: 4 (lower is better)
Translates to: GMQGLWCPGHQPRLGQGFGRQKR*PQVAAS
Trigger: TGAGGCGGCCACTTGGGGCCACCGCTTCTGGCGGCC...AAACCCTTGGCCCAGCCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCATCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403222.7
ENST00000407373.5
CDS-3UTR TCA 90 bp TGGGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCGGCAGGGGACAACCGTaGACAGCGACGAGAGCCCGC +
Preference number: 4 (lower is better)
Translates to: WGLERTQVSPSSFQGGSPGRGQP*TATRAR
Trigger: GCGGGCTCTCGTCGCTGTTCACGGTTGTCCCCTGCC...GGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332585.11
CDS-3UTR TCA 90 bp GGGATGCAAGGTCTCTGGTGCCCAGGTCACCAGCCCAGGCTGGGCCAAGGGTTTCCAGCTCCAGGGCGGTaGTCCACTGCTGCCGGTCCA +
Preference number: 4 (lower is better)
Translates to: GMQGLWCPGHQPRLGQGFPAPGR*STAAGP
Trigger: TGGACCGGCAGCAGTGGATCACCGCCCTGGAGCTGG...AAACCCTTGGCCCAGCCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCATCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
CDS-3UTR TCA 90 bp GTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCTGGGGGCTGGAGAGAACCCCTCCTCGTGCTCGTTaGGGGTCAGGGCCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: VHNEGARVTRRTWGLERTPPRAR*GSGPAL
Trigger: CAGAGCTGGCCCTGACCCTCAACGAGCACGAGGAGG...GGTTCTCTCCAGCCCCCAGGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp GCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCATGAAGGGGCACGGGTaGCCCGGCGCACCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: ARDCCPQIHMGVTISTPSMKGHG*PGAPGG
Trigger: GCCCCCAGGTGCGCCGGGTCACCCGTGCCCCTTCAT...GGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp AGGAGGGATGCAAGGTCTCTGGTGCCCAGGTCACCAGCCCAGGCTGGGCCAAGGTGGGTTGGGGGCTGGTaGTTTGCGCAGCCCATGGCC +
Preference number: 4 (lower is better)
Translates to: RRDARSLVPRSPAQAGPRWVGGW*FAQPMA
Trigger: GGCCATGGGCTGCGCAAATCACCAGCCCCCAACCCA...CCTTGGCCCAGCCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCATCCCTCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp CCTCCTTCCCTCTCCTTTGCCTGTGGCGGGGCCCCTGCCAGCCCTACTCACGGCTGCCCATGTGTGGACTaGACCCTCCCGACCTCCTGT +
Preference number: 4 (lower is better)
Translates to: PPSLSFACGGAPASPTHGCPCVD*TLPTSC
Trigger: ACAGGAGGTCGGGAGGGTTCAGTCCACACATGGGCA...GCCGTGAGTAGGGCTGGCAGGGGCCCCGCCACAGGCAAAGGAGAGGGAAGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433183.2
CDS-3UTR GCA 90 bp GTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCTGGGGGCTGGAGAGAACCCAGGGAGCGCTGGAGTaGAGCGCCGTGCTTGGCGAT +
Preference number: 4 (lower is better)
Translates to: VHNEGARVTRRTWGLERTQGALE*SAVLGD
Trigger: ATCGCCAAGCACGGCGCTGCACTCCAGCGCTCCCTG...GGTTCTCTCCAGCCCCCAGGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000437268.6
CDS-3UTR GCA 90 bp GGTTCCGGTAGGGCCCAGGTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCTGCACGCGCTGCTCCTaGTCATACTGCAGTGCCCGC +
Preference number: 4 (lower is better)
Translates to: GSGRAQVHNEGARVTRRTCTRCS*SYCSAR
Trigger: GCGGGCACTGCAGTATGAGCAGGAGCAGCGCGTGCA...GGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGACCTGGGCCCTACCGGAACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GGGCCAGCCGGCCTGAGTTGTGGTAACTGGGGCAGGGGTTCCGGTAGGGCCCAGCGCTCGAGGCTGTTGTaGTGCTTCGCCAGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: GPAGLSCGNWGRGSGRAQRSRLL*CFASCS
Trigger: TGAGCAGCTGGCGAAGCAGCACAACAGCCTCGAGCG...CTGGGCCCTACCGGAACCCCTGCCCCAGTTACCACAACTCAGGCCGGCTGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAACGCCGCGACAGGCGCTaGTTCTCCTCCAGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: GAGENPGQPFLLPRWESQRRDRR*FSSSRC
Trigger: GCAGCGGCTGGAGGAGAAGCAGCGCCTGTCGCGGCG...TTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GGGATGCAAGGTCTCTGGTGCCCAGGTCACCAGCCCAGGCTGGGCCAAGGGTTTTCTCTTCCTCCGAGCTaGAGCTGCTGCCCGGCCCGC +
Preference number: 4 (lower is better)
Translates to: GMQGLWCPGHQPRLGQGFSLPPS*SCCPAR
Trigger: GCGGGCCGGGCAGCAGCTGCAGCTCGGAGGAAGAGA...AAACCCTTGGCCCAGCCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCATCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp TGGGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCTCTGTGGGTCGCTCCTaGGGCCGCCAGAAGCGGTGG +
Preference number: 4 (lower is better)
Translates to: WGLERTQVSPSSFQGGSPSVGRS*GRQKRW
Trigger: CCACCGCTTCTGGCGGCCGCAGGAGCGACCCACAGA...GGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000403222.7
ENST00000407373.5
ENST00000438716.3
CDS-3UTR GCA 90 bp TGGGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCGGTCTCCTCTGCTGCTaGCGGCCTTCTCCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: WGLERTQVSPSSFQGGSPGLLCC*RPSPGP
Trigger: GGGGCCTGGAGAAGGCCGGCAGCAGCAGAGGAGACC...GGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000431368.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGTTCCGGTAGGGCCCAGGTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCCTCGCTCTTGTCGGCTaGGGTGGTAGCCTCGTCGTC +
Preference number: 4 (lower is better)
Translates to: GSGRAQVHNEGARVTRRTLALVG*GGSLVV
Trigger: GACGACGAGGCTACCACCCCAGCCGACAAGAGCGAG...GGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGACCTGGGCCCTACCGGAACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000437268.6
CDS-3UTR CCA 90 bp AGTTCCTCCCTGGGTTGGGGGCTGGTGATTTGCGCAGCCCATGGCCCGGGCCAGTCTGTCAGGGAGCGCTaGAGTGCAGCGCCGTGCTTG +
Preference number: 4 (lower is better)
Translates to: SSSLGWGLVICAAHGPGQSVRER*SAAPCL
Trigger: CAAGCACGGCGCTGCACTCCAGCGCTCCCTGACAGA...CTGGCCCGGGCCATGGGCTGCGCAAATCACCAGCCCCCAACCCAGGGAGGAACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000437268.6
CDS-3UTR CCA 90 bp GGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAAGCTCTTGGAGGGGTTaGCCGGCCGGCCAGGGGCAC +
Preference number: 4 (lower is better)
Translates to: GAGENPGQPFLLPRWESQSSWRG*PAGQGH
Trigger: GTGCCCCTGGCCGGCCGGCCAACCCCTCCAAGAGCT...TTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp TGGGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCCCGGCATGGGGATCCTaGAGAGCTCCCGGCCGATGC +
Preference number: 4 (lower is better)
Translates to: WGLERTQVSPSSFQGGSPPAWGS*RAPGRC
Trigger: GCATCGGCCGGGAGCTCTCCAGGATCCCCATGCCGG...GGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp TGGGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCCAGGCGGCTGTCGGTTaGCGCTACGCCCTCCTCGTG +
Preference number: 4 (lower is better)
Translates to: WGLERTQVSPSSFQGGSPQAAVG*RYALLV
Trigger: CACGAGGAGGGCGTAGCGCCAACCGACAGCCGCCTG...GGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp TGGGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCTTCTCCATCAGCCGCTaGTCGGGCCGCAGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: WGLERTQVSPSSFQGGSPFSISR*SGRRRL
Trigger: CAGCCGCCTGCGGCCCGACCAGCGGCTGATGGAGAA...GGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGATTTGCGCAGCCCATaGCCCGGGCCAGCCGGCCTG +
Preference number: 4 (lower is better)
Translates to: GAGENPGQPFLLPRWESQDLRSP*PGPAGL
Trigger: CAGGCCGGCTGGCCCGGGCCATGGGCTGCGCAAATC...TTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp TGGGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCGAGGGGCTGGGTCAGTaGCCATGGTGGTCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: WGLERTQVSPSSFQGGSPEGLGQ*PWWSSP
Trigger: GGGGCTGGACCACCATGGCCACTGACCCAGCCCCTC...GGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GCTTCTCCTTGGCCTCCCAGTAGCCGCCCTTGTACACACAGGCCATCTCCCCGGGAGGGGCTGGGTCAGTaGCCATGGTGGTCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: ASPWPPSSRPCTHRPSPREGLGQ*PWWSSP
Trigger: GGGGCTGGACCACCATGGCCACTGACCCAGCCCCTC...CCGGGGAGATGGCCTGTGTGTACAAGGGCGGCTACTGGGAGGCCAAGGAGAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452656.5
CDS-3UTR CCA 90 bp AGTTCCTCCCTGGGTTGGGGGCTGGTGATTTGCGCAGCCCATGGCCCGGGCCAGCCTGATTTCTGTCTGTaGGTCGCTCCTGCGGCCGCC +
Preference number: 4 (lower is better)
Translates to: SSSLGWGLVICAAHGPGQPDFCL*VAPAAA
Trigger: GGCGGCCGCAGGAGCGACCCACAGACAGAAATCAGG...CTGGCCCGGGCCATGGGCTGCGCAAATCACCAGCCCCCAACCCAGGGAGGAACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403222.7
ENST00000407373.5
CDS-3UTR CCA 90 bp AGGAGGGATGCAAGGTCTCTGGTGCCCAGGTCACCAGCCCAGGCTGGGCCAAGGATCCTGGCTGTGCTGTaGGGAGAGGCAGGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: RRDARSLVPRSPAQAGPRILAVL*GEAGAW
Trigger: CCAGGCGCCTGCCTCTCCCCACAGCACAGCCAGGAT...CCTTGGCCCAGCCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCATCCCTCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431368.5
ENST00000535268.5
CDS-3UTR TCA 90 bp CCTCCTTCCCTCTCCTTTGCCTGTGGCGGGGCCCCTGCCAGCCCTACTCACGGCCCACAGCAGCTTGGCTaGCAGGGTCTGGTACACTGT +
Preference number: 4 (lower is better)
Translates to: PPSLSFACGGAPASPTHGPQQLG*QGLVHC
Trigger: ACAGTGTACCAGACCCTGTCAGCCAAGCTGCTGTGG...GCCGTGAGTAGGGCTGGCAGGGGCCCCGCCACAGGCAAAGGAGAGGGAAGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433183.2
CDS-3UTR TCA 90 bp GCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAATGAAGGGGCACGGGTaGCCCGGCGCACCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: AGENPGQPFLLPRWESQEMKGHG*PGAPGG
Trigger: GCCCCCAGGTGCGCCGGGTCACCCGTGCCCCTTCAT...TTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GGCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCCCGGCCGCGACCCCTaGAGCAGTTCCGATGGCTGC +
Preference number: 4 (lower is better)
Translates to: GQGLLPSNPHGGYHQYPLPGRDP*SSSDGC
Trigger: GCAGCCATCGGAACTGCTGCAGGGGTCGCGGCCGGG...GAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000332585.11
CDS-3UTR GCA 90 bp CAGGTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCTGGGGGCTGGAGAGAAGGGCGGTGATCCACTaGTGCCGGTCCACCTCTGAG +
Preference number: 4 (lower is better)
Translates to: QVHNEGARVTRRTWGLERRAVIH*CRSTSE
Trigger: CTCAGAGGTGGACCGGCAGCAGTGGATCACCGCCCT...TCTCTCCAGCCCCCAGGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGACCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
CDS-3UTR GCA 90 bp TGGGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCCAGGGAGCGCTGGAGTaGAGCGCCGTGCTTGGCGAT +
Preference number: 4 (lower is better)
Translates to: WGLERTQVSPSSFQGGSPQGALE*SAVLGD
Trigger: ATCGCCAAGCACGGCGCTGCACTCCAGCGCTCCCTG...GGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000437268.6
ENST00000438716.3
CDS-3UTR GCA 90 bp AGTTCCTCCCTGGGTTGGGGGCTGGTGATTTGCGCAGCCCATGGCCCGGGCCAGGCTGGTGCAGTGCACTaGCTTGTCCAGCAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: SSSLGWGLVICAAHGPGQAGAVH*LVQQVV
Trigger: CACCACCTGCTGGACAAGGCAGTGCACTGCACCAGC...CTGGCCCGGGCCATGGGCTGCGCAAATCACCAGCCCCCAACCCAGGGAGGAACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GGCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCGCCGCGACAGGCGCTaGTTCTCCTCCAGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: GQGLLPSNPHGGYHQYPLRRDRR*FSSSRC
Trigger: GCAGCGGCTGGAGGAGAAGCAGCGCCTGTCGCGGCG...GAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAATGGGGGCTGGTGATTTaGGCAGCCCATGGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: GAGENPGQPFLLPRWESQWGLVI*AAHGPG
Trigger: GCCCGGGCCATGGGCTGCGCAAATCACCAGCCCCCA...TTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GGTTCCGGTAGGGCCCAGGTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCGCTCCAGAAACTCTGTaGTCTGCTGGGCTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: GSGRAQVHNEGARVTRRTAPETL*SAGLGQ
Trigger: CTGCCCCAGCCCAGCAGAGCACAGAGTTTCTGGAGC...GGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGACCTGGGCCCTACCGGAACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp AGTTCCTCCCTGGGTTGGGGGCTGGTGATTTGCGCAGCCCATGGCCCGGGCCAGGAGGCCAGGGACTGCTaGCCTCAAATCCACATGGGG +
Preference number: 4 (lower is better)
Translates to: SSSLGWGLVICAAHGPGQEARDC*PQIHMG
Trigger: CCCCATGTGGATTTGAGGGCAGCAGTCCCTGGCCTC...CTGGCCCGGGCCATGGGCTGCGCAAATCACCAGCCCCCAACCCAGGGAGGAACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp CCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAGGGCGGGGAGCACCTaGAGGCCCTGCCTTCCAGCC +
Preference number: 4 (lower is better)
Translates to: PRSALPPSKVGVPRKCGERAGST*RPCLPA
Trigger: GGCTGGAAGGCAGGGCCTGCAGGTGCTCCCCGCCCT...CTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GTCCTCCTTCCCTCTCCTTTGCCTGTGGCGGGGCCCCTGCCAGCCCTACTCACGAGAGGTGGCTGGTCCTaGTTACCTTCCGGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: VLLPSPLPVAGPLPALLTRGGWS*LPSGLP
Trigger: AGGCAGCCCGGAAGGTAAGCAGGACCAGCCACCTCT...CGTGAGTAGGGCTGGCAGGGGCCCCGCCACAGGCAAAGGAGAGGGAAGGAGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433183.2
CDS-3UTR GCA 90 bp CCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGGCTTGCACGGACGCGTaGACAGCTCGGTGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: PRSALPPSKVGVPRKCGEACTDA*TARWAA
Trigger: GGCGGCCCACCGAGCTGTGCACGCGTCCGTGCAAGC...CTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437268.6
CDS-3UTR GCA 90 bp GCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCCTGCTTCCTCCGAGCTaGAGCTGCTGCCCGGCCCGC +
Preference number: 4 (lower is better)
Translates to: ARDCCPQIHMGVTISTPSLLPPS*SCCPAR
Trigger: GCGGGCCGGGCAGCAGCTGCAGCTCGGAGGAAGCAG...GGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000437268.6
CDS-3UTR CCA 90 bp GGGCCAAGGGTTTGTTCATTATTGCTGATTTGGGGCCTGGGTCTCAGGGCGGGGGCCCGGAGCCGGACGTaGAAGCGCTCATGCCCGGCG +
Preference number: 4 (lower is better)
Translates to: GPRVCSLLLIWGLGLRAGARSRT*KRSCPA
Trigger: CGCCGGGCATGAGCGCTTCCACGTCCGGCTCCGGGC...CCCCGCCCTGAGACCCAGGCCCCAAATCAGCAATAATGAACAAACCCTTGGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332585.11
CDS-3UTR CCA 90 bp GGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAAGGCCAGTGGGGCACTaGAGGTCGTGCCAGTCCCCG +
Preference number: 4 (lower is better)
Translates to: GAGENPGQPFLLPRWESQRPVGH*RSCQSP
Trigger: CGGGGACTGGCACGACCTCCAGTGCCCCACTGGCCT...TTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332585.11
CDS-3UTR CCA 90 bp CAGGTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCTGGGGGCTGGAGAGACTCGCTCTTGTCGGCTaGGGTGGTAGCCTCGTCGTC +
Preference number: 4 (lower is better)
Translates to: QVHNEGARVTRRTWGLERLALVG*GGSLVV
Trigger: GACGACGAGGCTACCACCCCAGCCGACAAGAGCGAG...TCTCTCCAGCCCCCAGGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGACCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000437268.6
CDS-3UTR CCA 90 bp CCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAGCTCTTGGAGGGGTTaGCCGGCCGGCCAGGGGCAC +
Preference number: 4 (lower is better)
Translates to: PRSALPPSKVGVPRKCGESSWRG*PAGQGH
Trigger: GTGCCCCTGGCCGGCCGGCCAACCCCTCCAAGAGCT...CTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGGCCAGCCGGCCTGAGTTGTGGTAACTGGGGCAGGGGTTCCGGTAGGGCCCAGGGCTCCAGCCATGCTTaGAGAACACGTAGTGCGCAG +
Preference number: 4 (lower is better)
Translates to: GPAGLSCGNWGRGSGRAQGSSHA*RTRSAQ
Trigger: CTGCGCACTACGTGTTCTCCAAGCATGGCTGGAGCC...CTGGGCCCTACCGGAACCCCTGCCCCAGTTACCACAACTCAGGCCGGCTGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGTTCCGGTAGGGCCCAGGTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCGCTTCCCGTCAGAGCTaGGGCTGCTGGGACTGCTAT +
Preference number: 4 (lower is better)
Translates to: GSGRAQVHNEGARVTRRTASRQS*GCWDCY
Trigger: ATAGCAGTCCCAGCAGCCCCAGCTCTGACGGGAAGC...GGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGACCTGGGCCCTACCGGAACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000535268.5
CDS-3UTR CCA 90 bp GGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAATTCTCCATCAGCCGCTaGTCGGGCCGCAGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: GAGENPGQPFLLPRWESQFSISR*SGRRRL
Trigger: CAGCCGCCTGCGGCCCGACCAGCGGCTGATGGAGAA...TTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGGCCAGCCGGCCTGAGTTGTGGTAACTGGGGCAGGGGTTCCGGTAGGGCCCAGGCATTAATGAACAGGTaGGCCAGGCTGTGCAGGCGC +
Preference number: 4 (lower is better)
Translates to: GPAGLSCGNWGRGSGRAQALMNR*ARLCRR
Trigger: GCGCCTGCACAGCCTGGCCCACCTGTTCATTAATGC...CTGGGCCCTACCGGAACCCCTGCCCCAGTTACCACAACTCAGGCCGGCTGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGGCCAGCCGGCCTGAGTTGTGGTAACTGGGGCAGGGGTTCCGGTAGGGCCCAGAGTTCCTCCCTGGGTTaGGGGCTGGTGATTTGCGCA +
Preference number: 4 (lower is better)
Translates to: GPAGLSCGNWGRGSGRAQSSSLG*GLVICA
Trigger: TGCGCAAATCACCAGCCCCCAACCCAGGGAGGAACT...CTGGGCCCTACCGGAACCCCTGCCCCAGTTACCACAACTCAGGCCGGCTGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp AGTTCCTCCCTGGGTTGGGGGCTGGTGATTTGCGCAGCCCATGGCCCGGGCCAGTGTGCTCTGCTGGGCTaGGGCAGCCCCCTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: SSSLGWGLVICAAHGPGQCALLG*GSPLLF
Trigger: AAACAGAAGGGGGCTGCCCCAGCCCAGCAGAGCACA...CTGGCCCGGGCCATGGGCTGCGCAAATCACCAGCCCCCAACCCAGGGAGGAACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGTTCCGGTAGGGCCCAGGTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCTGTGCTCTGCTGGGCTaGGGCAGCCCCCTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: GSGRAQVHNEGARVTRRTCALLG*GSPLLF
Trigger: AAACAGAAGGGGGCTGCCCCAGCCCAGCAGAGCACA...GGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGACCTGGGCCCTACCGGAACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGGGCCGCCAGAAGCGGTaGCCCCAAGTGGCCGCCTCA +
Preference number: 4 (lower is better)
Translates to: PRSALPPSKVGVPRKCGEGRQKR*PQVAAS
Trigger: TGAGGCGGCCACTTGGGGCCACCGCTTCTGGCGGCC...CTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403222.7
ENST00000407373.5
ENST00000438716.3
CDS-3UTR TCA 90 bp GGCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCCAGCTCCAGGGCGGTaGTCCACTGCTGCCGGTCCA +
Preference number: 4 (lower is better)
Translates to: GQGLLPSNPHGGYHQYPLPAPGR*STAAGP
Trigger: TGGACCGGCAGCAGTGGATCACCGCCCTGGAGCTGG...GAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
CDS-3UTR TCA 90 bp GGTTCCGGTAGGGCCCAGGTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCCCACAGCAGCTTGGCTaGCAGGGTCTGGTACACTGT +
Preference number: 4 (lower is better)
Translates to: GSGRAQVHNEGARVTRRTPQQLG*QGLVHC
Trigger: ACAGTGTACCAGACCCTGTCAGCCAAGCTGCTGTGG...GGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGACCTGGGCCCTACCGGAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000535268.5
CDS-3UTR TCA 90 bp CCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGCCGGGCCAGCCGGCCTaGGTTGTGGTAACTGGGGCA +
Preference number: 4 (lower is better)
Translates to: PRSALPPSKVGVPRKCGEPGQPA*VVVTGA
Trigger: TGCCCCAGTTACCACAACTCAGGCCGGCTGGCCCGG...CTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp GGCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCCGGGCCAGCCGGCCTaGGTTGTGGTAACTGGGGCA +
Preference number: 4 (lower is better)
Translates to: GQGLLPSNPHGGYHQYPLPGQPA*VVVTGA
Trigger: TGCCCCAGTTACCACAACTCAGGCCGGCTGGCCCGG...GAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp GGTTCCGGTAGGGCCCAGGTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCAGGGCACAGCTCACATaGGGGCCAAACTCAGACAGG +
Preference number: 4 (lower is better)
Translates to: GSGRAQVHNEGARVTRRTRAQLT*GPNSDR
Trigger: CCTGTCTGAGTTTGGCCCTCATGTGAGCTGTGCCCT...GGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGACCTGGGCCCTACCGGAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp AGTTCCTCCCTGGGTTGGGGGCTGGTGATTTGCGCAGCCCATGGCCCGGGCCAGTGGAGTGCAGCGCCGTaGTTGGCGATGAGGTCATTG +
Preference number: 4 (lower is better)
Translates to: SSSLGWGLVICAAHGPGQWSAAP*LAMRSL
Trigger: CAATGACCTCATCGCCAAGCACGGCGCTGCACTCCA...CTGGCCCGGGCCATGGGCTGCGCAAATCACCAGCCCCCAACCCAGGGAGGAACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000437268.6
CDS-3UTR GCA 90 bp GGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAACAGGGAGCGCTGGAGTaGAGCGCCGTGCTTGGCGAT +
Preference number: 4 (lower is better)
Translates to: GAGENPGQPFLLPRWESQQGALE*SAVLGD
Trigger: ATCGCCAAGCACGGCGCTGCACTCCAGCGCTCCCTG...TTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000437268.6
ENST00000438716.3
CDS-3UTR GCA 90 bp GGGCCAGCCGGCCTGAGTTGTGGTAACTGGGGCAGGGGTTCCGGTAGGGCCCAGTGCTCCTGCTCATACTaGAGTGCCCGCTGCCATTTC +
Preference number: 4 (lower is better)
Translates to: GPAGLSCGNWGRGSGRAQCSCSY*SARCHF
Trigger: GAAATGGCAGCGGGCACTGCAGTATGAGCAGGAGCA...CTGGGCCCTACCGGAACCCCTGCCCCAGTTACCACAACTCAGGCCGGCTGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp TGGGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCTGCACGCGCTGCTCCTaGTCATACTGCAGTGCCCGC +
Preference number: 4 (lower is better)
Translates to: WGLERTQVSPSSFQGGSPCTRCS*SYCSAR
Trigger: GCGGGCACTGCAGTATGAGCAGGAGCAGCGCGTGCA...GGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GGGCCAGCCGGCCTGAGTTGTGGTAACTGGGGCAGGGGTTCCGGTAGGGCCCAGATGGTTTCCTCCAAGTaGACGCGCTGCTCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: GPAGLSCGNWGRGSGRAQMVSSK*TRCSCS
Trigger: TGAGCAGGAGCAGCGCGTGCACTTGGAGGAAACCAT...CTGGGCCCTACCGGAACCCCTGCCCCAGTTACCACAACTCAGGCCGGCTGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GGGCCAGCCGGCCTGAGTTGTGGTAACTGGGGCAGGGGTTCCGGTAGGGCCCAGTCGAGGCTGTTGTGCTaGTTCGCCAGCTGCTCAATG +
Preference number: 4 (lower is better)
Translates to: GPAGLSCGNWGRGSGRAQSRLLC*FASCSM
Trigger: CATTGAGCAGCTGGCGAAGCAGCACAACAGCCTCGA...CTGGGCCCTACCGGAACCCCTGCCCCAGTTACCACAACTCAGGCCGGCTGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGGGTGGTGGCTCACCTaGTCACAGAGGGAGCGCAGG +
Preference number: 4 (lower is better)
Translates to: GAGENPGQPFLLPRWESQGWWLT*SQRERR
Trigger: CCTGCGCTCCCTCTGTGAGCAGGTGAGCCACCACCC...TTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp AGTTCCTCCCTGGGTTGGGGGCTGGTGATTTGCGCAGCCCATGGCCCGGGCCAGGCACGTAATGGGCCTTaGCCTGGCTGTCACTCACCA +
Preference number: 4 (lower is better)
Translates to: SSSLGWGLVICAAHGPGQARNGP*PGCHSP
Trigger: TGGTGAGTGACAGCCAGGGCAAGGCCCATTACGTGC...CTGGCCCGGGCCATGGGCTGCGCAAATCACCAGCCCCCAACCCAGGGAGGAACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000535268.5
CDS-3UTR GCA 90 bp GGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGCTACGCCCTCCTCGTaGTCGTTGAGGGTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: GAGENPGQPFLLPRWESQATPSS*SLRVRA
Trigger: GGCCCTGACCCTCAACGAGCACGAGGAGGGCGTAGC...TTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp AGTTCCTCCCTGGGTTGGGGGCTGGTGATTTGCGCAGCCCATGGCCCGGGCCAGTTCTCCTCCAGCCGCTaGTTCTCGGTATTGGCCTCG +
Preference number: 4 (lower is better)
Translates to: SSSLGWGLVICAAHGPGQFSSSR*FSVLAS
Trigger: CGAGGCCAATACCGAGAAGCAGCGGCTGGAGGAGAA...CTGGCCCGGGCCATGGGCTGCGCAAATCACCAGCCCCCAACCCAGGGAGGAACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GGGCCAAGGGTTTGTTCATTATTGCTGATTTGGGGCCTGGGTCTCAGGGCGGGGCGCCGCGACAGGCGCTaGTTCTCCTCCAGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: GPRVCSLLLIWGLGLRAGRRDRR*FSSSRC
Trigger: GCAGCGGCTGGAGGAGAAGCAGCGCCTGTCGCGGCG...CCCCGCCCTGAGACCCAGGCCCCAAATCAGCAATAATGAACAAACCCTTGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp CCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGTCTCTTCCTCCGAGCTaGAGCTGCTGCCCGGCCCGC +
Preference number: 4 (lower is better)
Translates to: PRSALPPSKVGVPRKCGESLPPS*SCCPAR
Trigger: GCGGGCCGGGCAGCAGCTGCAGCTCGGAGGAAGAGA...CTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GGCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCTCTCTTCCTCCGAGCTaGAGCTGCTGCCCGGCCCGC +
Preference number: 4 (lower is better)
Translates to: GQGLLPSNPHGGYHQYPLSLPPS*SCCPAR
Trigger: GCGGGCCGGGCAGCAGCTGCAGCTCGGAGGAAGAGA...GAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGGGGGCTGGTGATTTaGGCAGCCCATGGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: ARDCCPQIHMGVTISTPSWGLVI*AAHGPG
Trigger: GCCCGGGCCATGGGCTGCGCAAATCACCAGCCCCCA...GGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GGCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCTGGGGGCTGGTGATTTaGGCAGCCCATGGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: GQGLLPSNPHGGYHQYPLWGLVI*AAHGPG
Trigger: GCCCGGGCCATGGGCTGCGCAAATCACCAGCCCCCA...GAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp TGGGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAGAAACTCTGTGCTCTaGTGGGCTGGGGCAGCCCCC +
Preference number: 4 (lower is better)
Translates to: WGLERTQVSPSSFQGGSPRNSVL*WAGAAP
Trigger: GGGGGCTGCCCCAGCCCAGCAGAGCACAGAGTTTCT...GGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp CAGGTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCTGGGGGCTGGAGAGAGCTCCAGAAACTCTGTaGTCTGCTGGGCTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: QVHNEGARVTRRTWGLERAPETL*SAGLGQ
Trigger: CTGCCCCAGCCCAGCAGAGCACAGAGTTTCTGGAGC...TCTCTCCAGCCCCCAGGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGACCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp CAGGTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCTGGGGGCTGGAGAGAGAGGCCAGGGACTGCTaGCCTCAAATCCACATGGGG +
Preference number: 4 (lower is better)
Translates to: QVHNEGARVTRRTWGLEREARDC*PQIHMG
Trigger: CCCCATGTGGATTTGAGGGCAGCAGTCCCTGGCCTC...TCTCTCCAGCCCCCAGGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGACCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCTGGGGGCTGGAGAGAACCGAGGCCAGGGACTGCTaGCCTCAAATCCACATGGGG +
Preference number: 4 (lower is better)
Translates to: VHNEGARVTRRTWGLERTEARDC*PQIHMG
Trigger: CCCCATGTGGATTTGAGGGCAGCAGTCCCTGGCCTC...GGTTCTCTCCAGCCCCCAGGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp CTTGGCCTCCCAGTAGCCGCCCTTGTACACACAGGCCATCTCCCCGGTCAGCGGGAGGCCAGGGACTGCTaGCCTCAAATCCACATGGGG +
Preference number: 4 (lower is better)
Translates to: LGLPVAALVHTGHLPGQREARDC*PQIHMG
Trigger: CCCCATGTGGATTTGAGGGCAGCAGTCCCTGGCCTC...CCGCTGACCGGGGAGATGGCCTGTGTGTACAAGGGCGGCTACTGGGAGGCCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452656.5
CDS-3UTR GCA 90 bp CCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAGGGCGGGGAGCACCTaGAGGCCCTGCCTTCCAGCC +
Preference number: 4 (lower is better)
Translates to: PGQPFLLPRWESQESVGRRAGST*RPCLPA
Trigger: GGCTGGAAGGCAGGGCCTGCAGGTGCTCCCCGCCCT...TCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GGGATGCAAGGTCTCTGGTGCCCAGGTCACCAGCCCAGGCTGGGCCAAGGGTTTTCCCAGGGTCTCCTCTaGTGCTGCCGGCCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: GMQGLWCPGHQPRLGQGFSQGLL*CCRPSP
Trigger: TGGAGAAGGCCGGCAGCAGCAGAGGAGACCCTGGGA...AAACCCTTGGCCCAGCCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCATCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431368.5
ENST00000535268.5
CDS-3UTR CCA 90 bp AGTTCCTCCCTGGGTTGGGGGCTGGTGATTTGCGCAGCCCATGGCCCGGGCCAGCTCCCCACTCTCAGATaGGATCTTGAGGCCGTCCAG +
Preference number: 4 (lower is better)
Translates to: SSSLGWGLVICAAHGPGQLPTLR*DLEAVQ
Trigger: CTGGACGGCCTCAAGATCCCATCTGAGAGTGGGGAG...CTGGCCCGGGCCATGGGCTGCGCAAATCACCAGCCCCCAACCCAGGGAGGAACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000437268.6
CDS-3UTR CCA 90 bp TCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGAGCTCCCGGCCAGGGGCACTGTaGAAGGCCCGCTCGAGGCTG +
Preference number: 4 (lower is better)
Translates to: STWGLPSVPPPASVDGSSRPGAL*KARSRL
Trigger: CAGCCTCGAGCGGGCCTTCCACAGTGCCCCTGGCCG...GGAGCTCCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGCTCTTGGAGGGGTTaGCCGGCCGGCCAGGGGCAC +
Preference number: 4 (lower is better)
Translates to: AGENPGQPFLLPRWESQESSWRG*PAGQGH
Trigger: GTGCCCCTGGCCGGCCGGCCAACCCCTCCAAGAGCT...TTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGGCCAGCCGGCCTGAGTTGTGGTAACTGGGGCAGGGGTTCCGGTAGGGCCCAGTGCGGTGCACTGTGGTaGAGTAGGAGGACACAGAGA +
Preference number: 4 (lower is better)
Translates to: GPAGLSCGNWGRGSGRAQCGALW*SRRTQR
Trigger: TCTCTGTGTCCTCCTACTCCACCACAGTGCACCGCA...CTGGGCCCTACCGGAACCCCTGCCCCAGTTACCACAACTCAGGCCGGCTGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp AGTTCCTCCCTGGGTTGGGGGCTGGTGATTTGCGCAGCCCATGGCCCGGGCCAGTCGATGTCCCCTGACTaGTCGATCCAGAGCTTGCCC +
Preference number: 4 (lower is better)
Translates to: SSSLGWGLVICAAHGPGQSMSPD*SIQSLP
Trigger: GGGCAAGCTCTGGATCGACCAGTCAGGGGACATCGA...CTGGCCCGGGCCATGGGCTGCGCAAATCACCAGCCCCCAACCCAGGGAGGAACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GCGGGGCCCCTGCCAGCCCTACTCACGGCAGCGGGTACTTCTTCCACAGCAGCTTCGATGTCCCCTGACTaGTCGATCCAGAGCTTGCCC +
Preference number: 4 (lower is better)
Translates to: AGPLPALLTAAGTSSTAASMSPD*SIQSLP
Trigger: GGGCAAGCTCTGGATCGACCAGTCAGGGGACATCGA...AGCTGCTGTGGAAGAAGTACCCGCTGCCGTGAGTAGGGCTGGCAGGGGCCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000433183.2
CDS-3UTR CCA 90 bp CCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGCAGGCGGCTGTCGGTTaGCGCTACGCCCTCCTCGTG +
Preference number: 4 (lower is better)
Translates to: PRSALPPSKVGVPRKCGEQAAVG*RYALLV
Trigger: CACGAGGAGGGCGTAGCGCCAACCGACAGCCGCCTG...CTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTTCTCCATCAGCCGCTaGTCGGGCCGCAGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: ARDCCPQIHMGVTISTPSFSISR*SGRRRL
Trigger: CAGCCGCCTGCGGCCCGACCAGCGGCTGATGGAGAA...GGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CTTGGCCTCCCAGTAGCCGCCCTTGTACACACAGGCCATCTCCCCGGTCAGCGGGCTGCTTCTCGGTATTaGCCTCGTCCCAACGGCCCT +
Preference number: 4 (lower is better)
Translates to: LGLPVAALVHTGHLPGQRAASRY*PRPNGP
Trigger: AGGGCCGTTGGGACGAGGCCAATACCGAGAAGCAGC...CCGCTGACCGGGGAGATGGCCTGTGTGTACAAGGGCGGCTACTGGGAGGCCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452656.5
CDS-3UTR CCA 90 bp GGCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCGGCGCACCTGGGGGCTaGAGAGAACCCAGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: GQGLLPSNPHGGYHQYPLGAPGG*REPRSA
Trigger: GGCTGACCTGGGTTCTCTCCAGCCCCCAGGTGCGCC...GAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGGGCGCACCTGGGGGCTaGAGAGAACCCAGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: PRSALPPSKVGVPRKCGEGAPGG*REPRSA
Trigger: GGCTGACCTGGGTTCTCTCCAGCCCCCAGGTGCGCC...CTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCGTGACCCGGCGCACCTaGGGGCTGGAGAGAACCCAG +
Preference number: 4 (lower is better)
Translates to: GQGLLPSNPHGGYHQYPLVTRRT*GLERTQ
Trigger: CTGGGTTCTCTCCAGCCCCCAGGTGCGCCGGGTCAC...GAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGGTGACCCGGCGCACCTaGGGGCTGGAGAGAACCCAG +
Preference number: 4 (lower is better)
Translates to: PRSALPPSKVGVPRKCGEVTRRT*GLERTQ
Trigger: CTGGGTTCTCTCCAGCCCCCAGGTGCGCCGGGTCAC...CTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCGAGGGGCTGGGTCAGTaGCCATGGTGGTCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: GQGLLPSNPHGGYHQYPLEGLGQ*PWWSSP
Trigger: GGGGCTGGACCACCATGGCCACTGACCCAGCCCCTC...GAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCTGGGGGCTGGAGAGAACCGGGATTCTGAGGGGCTaGGTCAGTGGCCATGGTGGT +
Preference number: 4 (lower is better)
Translates to: VHNEGARVTRRTWGLERTGILRG*VSGHGG
Trigger: ACCACCATGGCCACTGACCCAGCCCCTCAGAATCCC...GGTTCTCTCCAGCCCCCAGGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CTTGGCCTCCCAGTAGCCGCCCTTGTACACACAGGCCATCTCCCCGGTCAGCGGGGGATTCTGAGGGGCTaGGTCAGTGGCCATGGTGGT +
Preference number: 4 (lower is better)
Translates to: LGLPVAALVHTGHLPGQRGILRG*VSGHGG
Trigger: ACCACCATGGCCACTGACCCAGCCCCTCAGAATCCC...CCGCTGACCGGGGAGATGGCCTGTGTGTACAAGGGCGGCTACTGGGAGGCCAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000452656.5
CDS-3UTR CCA 90 bp GGGCCAAGGGTTTGTTCATTATTGCTGATTTGGGGCCTGGGTCTCAGGGCGGGGAGCGGTGGCCCCAAGTaGCCGCCTCACCGCCTCCAC +
Preference number: 4 (lower is better)
Translates to: GPRVCSLLLIWGLGLRAGSGGPK*PPHRLH
Trigger: GTGGAGGCGGTGAGGCGGCCACTTGGGGCCACCGCT...CCCCGCCCTGAGACCCAGGCCCCAAATCAGCAATAATGAACAAACCCTTGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000403222.7
ENST00000407373.5
CDS-3UTR CCA 90 bp GCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGCGGTGGCCCCAAGTaGCCGCCTCACCGCCTCCAC +
Preference number: 4 (lower is better)
Translates to: AGENPGQPFLLPRWESQESGGPK*PPHRLH
Trigger: GTGGAGGCGGTGAGGCGGCCACTTGGGGCCACCGCT...TTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403222.7
ENST00000407373.5
ENST00000438716.3
CDS-3UTR CCA 90 bp TGGGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCGGCAGGCGCCTGGCGTaGCCCTGCTGTTCTCAGAAT +
Preference number: 4 (lower is better)
Translates to: WGLERTQVSPSSFQGGSPGRRLA*PCCSQN
Trigger: ATTCTGAGAACAGCAGGGCCACGCCAGGCGCCTGCC...GGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000431368.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CAGGTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCTGGGGGCTGGAGAGAAAGTCCCTGCAGGCCTaGTGTCCATCCCTGACTCCC +
Preference number: 4 (lower is better)
Translates to: QVHNEGARVTRRTWGLERKSLQA*CPSLTP
Trigger: GGGAGTCAGGGATGGACACCAGGCCTGCAGGGACTT...TCTCTCCAGCCCCCAGGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGACCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431368.5
ENST00000535268.5
CDS-3UTR TCA 90 bp GGGCCAAGGGTTTGTTCATTATTGCTGATTTGGGGCCTGGGTCTCAGGGCGGGGCTCCGACACCTGTTCTaGCAGCGGTCCCCGCTCCGG +
Preference number: 4 (lower is better)
Translates to: GPRVCSLLLIWGLGLRAGLRHLF*QRSPLR
Trigger: CCGGAGCGGGGACCGCTGTCAGAACAGGTGTCGGAG...CCCCGCCCTGAGACCCAGGCCCCAAATCAGCAATAATGAACAAACCCTTGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332585.11
CDS-3UTR TCA 90 bp GGGATGCAAGGTCTCTGGTGCCCAGGTCACCAGCCCAGGCTGGGCCAAGGGTTTCGCTGGCAGCGATCCTaGCTCGGGTCTGAGAAAGGT +
Preference number: 4 (lower is better)
Translates to: GMQGLWCPGHQPRLGQGFRWQRS*LGSEKG
Trigger: ACCTTTCTCAGACCCGAGTCAGGATCGCTGCCAGCG...AAACCCTTGGCCCAGCCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCATCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332585.11
CDS-3UTR TCA 90 bp GGTTCCGGTAGGGCCCAGGTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCAGAGGCTTCCCTCAATaGAGCTCTTGGAGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: GSGRAQVHNEGARVTRRTRGFPQ*SSWRGW
Trigger: CCAACCCCTCCAAGAGCTTCATTGAGGGAAGCCTCT...GGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGACCTGGGCCCTACCGGAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp GTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCTGGGGGCTGGAGAGAACCTGGACAGGGGCTCATTaGAGTTCACCGGCATGGGGA +
Preference number: 4 (lower is better)
Translates to: VHNEGARVTRRTWGLERTWTGAH*SSPAWG
Trigger: TCCCCATGCCGGTGAACTTCAATGAGCCCCTGTCCA...GGTTCTCTCCAGCCCCCAGGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp GGCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCCCCCAGCATGGGGTTaGAGGGCTTGGCGATGCGGT +
Preference number: 4 (lower is better)
Translates to: GQGLLPSNPHGGYHQYPLPPAWG*RAWRCG
Trigger: ACCGCATCGCCAAGCCCTTCAACCCCATGCTGGGGG...GAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGCC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp GTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCTGGGGGCTGGAGAGAACCACTTGCTGGAGATGGTaGTCTCCTGCCAGAGGCTCC +
Preference number: 4 (lower is better)
Translates to: VHNEGARVTRRTWGLERTTCWRW*SPARGS
Trigger: GGAGCCTCTGGCAGGAGATCACCATCTCCAGCAAGT...GGTTCTCTCCAGCCCCCAGGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp CTTGGCCTCCCAGTAGCCGCCCTTGTACACACAGGCCATCTCCCCGGTCAGCGGACTTGCTGGAGATGGTaGTCTCCTGCCAGAGGCTCC +
Preference number: 4 (lower is better)
Translates to: LGLPVAALVHTGHLPGQRTCWRW*SPARGS
Trigger: GGAGCCTCTGGCAGGAGATCACCATCTCCAGCAAGT...CCGCTGACCGGGGAGATGGCCTGTGTGTACAAGGGCGGCTACTGGGAGGCCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452656.5
CDS-3UTR TCA 90 bp CCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGACCGGGCCAGCCGGCCTaGGTTGTGGTAACTGGGGCA +
Preference number: 4 (lower is better)
Translates to: PGQPFLLPRWESQESVGRPGQPA*VVVTGA
Trigger: TGCCCCAGTTACCACAACTCAGGCCGGCTGGCCCGG...TCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp GCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGGGTTGGGGGCTGGTaGTTTGCGCAGCCCATGGCC +
Preference number: 4 (lower is better)
Translates to: ARDCCPQIHMGVTISTPSWVGGW*FAQPMA
Trigger: GGCCATGGGCTGCGCAAATCACCAGCCCCCAACCCA...GGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp GTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCTGGGGGCTGGAGAGAACCAGGGCACAGCTCACATaGGGGCCAAACTCAGACAGG +
Preference number: 4 (lower is better)
Translates to: VHNEGARVTRRTWGLERTRAQLT*GPNSDR
Trigger: CCTGTCTGAGTTTGGCCCTCATGTGAGCTGTGCCCT...GGTTCTCTCCAGCCCCCAGGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp CAGGTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCTGGGGGCTGGAGAGAAGGGCACAGCTCACATaGGGGCCAAACTCAGACAGG +
Preference number: 4 (lower is better)
Translates to: QVHNEGARVTRRTWGLERRAQLT*GPNSDR
Trigger: CCTGTCTGAGTTTGGCCCTCATGTGAGCTGTGCCCT...TCTCTCCAGCCCCCAGGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGACCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp CCTTGGCCTCCCAGTAGCCGCCCTTGTACACACAGGCCATCTCCCCGGTCAGCGAGGGCACAGCTCACATaGGGGCCAAACTCAGACAGG +
Preference number: 4 (lower is better)
Translates to: PWPPSSRPCTHRPSPRSARAQLT*GPNSDR
Trigger: CCTGTCTGAGTTTGGCCCTCATGTGAGCTGTGCCCT...CGCTGACCGGGGAGATGGCCTGTGTGTACAAGGGCGGCTACTGGGAGGCCAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452656.5
CDS-3UTR TCA 90 bp GGGATGCAAGGTCTCTGGTGCCCAGGTCACCAGCCCAGGCTGGGCCAAGGGTTTGCGCTTCGCTGCCAGTaGCGACATCGTTCGGGTTCT +
Preference number: 4 (lower is better)
Translates to: GMQGLWCPGHQPRLGQGFALRCQ*RHRSGS
Trigger: AGAACCCGAACGATGTCGTCACTGGCAGCGAAGCGC...AAACCCTTGGCCCAGCCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCATCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403222.7
ENST00000407373.5
CDS-3UTR GCA 90 bp TGGGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCGGGCACTGGAGGTCGTaGCAGTCCCCGACATTGGAA +
Preference number: 4 (lower is better)
Translates to: WGLERTQVSPSSFQGGSPGHWRS*QSPTLE
Trigger: TTCCAATGTCGGGGACTGGCACGACCTCCAGTGCCC...GGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332585.11
CDS-3UTR GCA 90 bp GGGCCAGCCGGCCTGAGTTGTGGTAACTGGGGCAGGGGTTCCGGTAGGGCCCAGTACTGCAGTGCCCGCTaGCATTTCCGACTGTGTATC +
Preference number: 4 (lower is better)
Translates to: GPAGLSCGNWGRGSGRAQYCSAR*HFRLCI
Trigger: GATACACAGTCGGAAATGGCAGCGGGCACTGCAGTA...CTGGGCCCTACCGGAACCCCTGCCCCAGTTACCACAACTCAGGCCGGCTGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GGTTCCGGTAGGGCCCAGGTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCTGCTCCTGCTCATACTaGAGTGCCCGCTGCCATTTC +
Preference number: 4 (lower is better)
Translates to: GSGRAQVHNEGARVTRRTCSCSY*SARCHF
Trigger: GAAATGGCAGCGGGCACTGCAGTATGAGCAGGAGCA...GGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGACCTGGGCCCTACCGGAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp AGTTCCTCCCTGGGTTGGGGGCTGGTGATTTGCGCAGCCCATGGCCCGGGCCAGTCCAAGTGCACGCGCTaGTCCTGCTCATACTGCAGT +
Preference number: 4 (lower is better)
Translates to: SSSLGWGLVICAAHGPGQSKCTR*SCSYCS
Trigger: ACTGCAGTATGAGCAGGAGCAGCGCGTGCACTTGGA...CTGGCCCGGGCCATGGGCTGCGCAAATCACCAGCCCCCAACCCAGGGAGGAACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GGTTCCGGTAGGGCCCAGGTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCTCCAAGTGCACGCGCTaGTCCTGCTCATACTGCAGT +
Preference number: 4 (lower is better)
Translates to: GSGRAQVHNEGARVTRRTSKCTR*SCSYCS
Trigger: ACTGCAGTATGAGCAGGAGCAGCGCGTGCACTTGGA...GGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGACCTGGGCCCTACCGGAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp AGTTCCTCCCTGGGTTGGGGGCTGGTGATTTGCGCAGCCCATGGCCCGGGCCAGATGGTTTCCTCCAAGTaGACGCGCTGCTCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: SSSLGWGLVICAAHGPGQMVSSK*TRCSCS
Trigger: TGAGCAGGAGCAGCGCGTGCACTTGGAGGAAACCAT...CTGGCCCGGGCCATGGGCTGCGCAAATCACCAGCCCCCAACCCAGGGAGGAACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp TGGGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCCGCTCGAGGCTGTTGTaGTGCTTCGCCAGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: WGLERTQVSPSSFQGGSPRSRLL*CFASCS
Trigger: TGAGCAGCTGGCGAAGCAGCACAACAGCCTCGAGCG...GGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GGGATGCAAGGTCTCTGGTGCCCAGGTCACCAGCCCAGGCTGGGCCAAGGGTTTGCTGGTGCAGTGCACTaGCTTGTCCAGCAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: GMQGLWCPGHQPRLGQGFAGAVH*LVQQVV
Trigger: CACCACCTGCTGGACAAGGCAGTGCACTGCACCAGC...AAACCCTTGGCCCAGCCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCATCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCTGGGGGCTGGAGAGAACCACTGAGCTGGTGCAGTaGACTGCCTTGTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: VHNEGARVTRRTWGLERTTELVQ*TALSSR
Trigger: CCTGCTGGACAAGGCAGTGCACTGCACCAGCTCAGT...GGTTCTCTCCAGCCCCCAGGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp CAGGTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCTGGGGGCTGGAGAGAGCTCCACTGAGCTGGTaGAGTGCACTGCCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: QVHNEGARVTRRTWGLERAPLSW*SALPCP
Trigger: TGGACAAGGCAGTGCACTGCACCAGCTCAGTGGAGC...TCTCTCCAGCCCCCAGGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGACCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp CCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGGGGTGGTGGCTCACCTaGTCACAGAGGGAGCGCAGG +
Preference number: 4 (lower is better)
Translates to: PRSALPPSKVGVPRKCGEGWWLT*SQRERR
Trigger: CCTGCGCTCCCTCTGTGAGCAGGTGAGCCACCACCC...CTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp AGTTCCTCCCTGGGTTGGGGGCTGGTGATTTGCGCAGCCCATGGCCCGGGCCAGCTGCTGGGACTGCTATaGATGACCTTGGAGCACTCC +
Preference number: 4 (lower is better)
Translates to: SSSLGWGLVICAAHGPGQLLGLL*MTLEHS
Trigger: GGAGTGCTCCAAGGTCATGCATAGCAGTCCCAGCAG...CTGGCCCGGGCCATGGGCTGCGCAAATCACCAGCCCCCAACCCAGGGAGGAACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000535268.5
CDS-3UTR GCA 90 bp GGACATTGGCAGGACCAGCGTAGGTGCAGACTCTGCCCTGGGCCCCCTGGGGTGCTGCTGGGACTGCTATaGATGACCTTGGAGCACTCC +
Preference number: 4 (lower is better)
Translates to: GHWQDQRRCRLCPGPPGVLLGLL*MTLEHS
Trigger: GGAGTGCTCCAAGGTCATGCATAGCAGTCCCAGCAG...CACCCCAGGGGGCCCAGGGCAGAGTCTGCACCTACGCTGGTCCTGCCAATGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433183.2
CDS-3UTR GCA 90 bp GCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCGCTACGCCCTCCTCGTaGTCGTTGAGGGTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: ARDCCPQIHMGVTISTPSATPSS*SLRVRA
Trigger: GGCCCTGACCCTCAACGAGCACGAGGAGGGCGTAGC...GGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCTGGGGGCTGGAGAGAACCTTCTCCTCCAGCCGCTaGTTCTCGGTATTGGCCTCG +
Preference number: 4 (lower is better)
Translates to: VHNEGARVTRRTWGLERTFSSSR*FSVLAS
Trigger: CGAGGCCAATACCGAGAAGCAGCGGCTGGAGGAGAA...GGTTCTCTCCAGCCCCCAGGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp CTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAACGCCGCGACAGGCGCTaGTTCTCCTCCAGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: LERTQVSPSSFQGGSPKKRRDRR*FSSSRC
Trigger: GCAGCGGCTGGAGGAGAAGCAGCGCCTGTCGCGGCG...TTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp CAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAACGCCGCGACAGGCGCTaGTTCTCCTCCAGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: QVSPSSFQGGSPKKVWGERRDRR*FSSSRC
Trigger: GCAGCGGCTGGAGGAGAAGCAGCGCCTGTCGCGGCG...TTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GGGCCAAGGGTTTGTTCATTATTGCTGATTTGGGGCCTGGGTCTCAGGGCGGGGTCTCTTCCTCCGAGCTaGAGCTGCTGCCCGGCCCGC +
Preference number: 4 (lower is better)
Translates to: GPRVCSLLLIWGLGLRAGSLPPS*SCCPAR
Trigger: GCGGGCCGGGCAGCAGCTGCAGCTCGGAGGAAGAGA...CCCCGCCCTGAGACCCAGGCCCCAAATCAGCAATAATGAACAAACCCTTGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GGGCCAGCCGGCCTGAGTTGTGGTAACTGGGGCAGGGGTTCCGGTAGGGCCCAGCACATATGCCAGTCTTaGTTCTCCTTGGCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: GPAGLSCGNWGRGSGRAQHICQS*FSLASQ
Trigger: CTGGGAGGCCAAGGAGAAGCAAGACTGGCATATGTG...CTGGGCCCTACCGGAACCCCTGCCCCAGTTACCACAACTCAGGCCGGCTGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCTGGGGGCTGGAGAGAACCAGGTGGGCCAGGCTGTaGAGGCGCCTGTATTTGTTG +
Preference number: 4 (lower is better)
Translates to: VHNEGARVTRRTWGLERTRWARL*RRLYLL
Trigger: CAACAAATACAGGCGCCTGCACAGCCTGGCCCACCT...GGTTCTCTCCAGCCCCCAGGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAATGGGGGCTGGTGATTTaGGCAGCCCATGGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: AGENPGQPFLLPRWESQEWGLVI*AAHGPG
Trigger: GCCCGGGCCATGGGCTGCGCAAATCACCAGCCCCCA...TTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp AGTTCCTCCCTGGGTTGGGGGCTGGTGATTTGCGCAGCCCATGGCCCGGGCCAGATCAGTACCCCCTCCTaGATCTGTGGATGGGAGCTC +
Preference number: 4 (lower is better)
Translates to: SSSLGWGLVICAAHGPGQISTPS*ICGWEL
Trigger: GAGCTCCCATCCACAGATGCAGGAGGGGGTACTGAT...CTGGCCCGGGCCATGGGCTGCGCAAATCACCAGCCCCCAACCCAGGGAGGAACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp CAGGTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCTGGGGGCTGGAGAGAGGTGAGGCCAGGGACTaGTGCCCTCAAATCCACATG +
Preference number: 4 (lower is better)
Translates to: QVHNEGARVTRRTWGLERGEARD*CPQIHM
Trigger: CATGTGGATTTGAGGGCAGCAGTCCCTGGCCTCACC...TCTCTCCAGCCCCCAGGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGACCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp CAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAAGGGCGGGGAGCACCTaGAGGCCCTGCCTTCCAGCC +
Preference number: 4 (lower is better)
Translates to: QVSPSSFQGGSPKKVWGERAGST*RPCLPA
Trigger: GGCTGGAAGGCAGGGCCTGCAGGTGCTCCCCGCCCT...TTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp TGGGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCATGCAAGGTCTCTGGTaGCCAGGTCACCAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: WGLERTQVSPSSFQGGSPMQGLW*PGHQPR
Trigger: CCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCAT...GGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GGACATTGGCAGGACCAGCGTAGGTGCAGACTCTGCCCTGGGCCCCCTGGGGTGCCTCCCGACCTCCTGTaGCTGTCAGTTGCTTTCTGT +
Preference number: 4 (lower is better)
Translates to: GHWQDQRRCRLCPGPPGVPPDLL*LSVAFC
Trigger: ACAGAAAGCAACTGACAGGCACAGGAGGTCGGGAGG...CACCCCAGGGGGCCCAGGGCAGAGTCTGCACCTACGCTGGTCCTGCCAATGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433183.2
CDS-3UTR CCA 90 bp GGTTCCGGTAGGGCCCAGGTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCCACAGGTTCCGATCTTaGCACTGCCTCCGAAACTGC +
Preference number: 4 (lower is better)
Translates to: GSGRAQVHNEGARVTRRTHRFRS*HCLRNC
Trigger: GCAGTTTCGGAGGCAGTGCCAAGATCGGAACCTGTG...GGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGACCTGGGCCCTACCGGAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332585.11
CDS-3UTR CCA 90 bp GGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAACTCGCTCTTGTCGGCTaGGGTGGTAGCCTCGTCGTC +
Preference number: 4 (lower is better)
Translates to: GAGENPGQPFLLPRWESQLALVG*GGSLVV
Trigger: GACGACGAGGCTACCACCCCAGCCGACAAGAGCGAG...TTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000437268.6
ENST00000438716.3
CDS-3UTR CCA 90 bp CTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAACGGCCAGGGGCACTGTaGAAGGCCCGCTCGAGGCTG +
Preference number: 4 (lower is better)
Translates to: LERTQVSPSSFQGGSPKKRPGAL*KARSRL
Trigger: CAGCCTCGAGCGGGCCTTCCACAGTGCCCCTGGCCG...TTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAAGCTCTTGGAGGGGTTaGCCGGCCGGCCAGGGGCAC +
Preference number: 4 (lower is better)
Translates to: LERTQVSPSSFQGGSPKKSSWRG*PAGQGH
Trigger: GTGCCCCTGGCCGGCCGGCCAACCCCTCCAAGAGCT...TTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGTTCCGGTAGGGCCCAGGTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCCTTTGGATGAACCCTTaGGCACGAGCGAGGCACCAT +
Preference number: 4 (lower is better)
Translates to: GSGRAQVHNEGARVTRRTLWMNP*ARARHH
Trigger: ATGGTGCCTCGCTCGTGCCCAAGGGTTCATCCAAAG...GGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGACCTGGGCCCTACCGGAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGGCCAGCCGGCCTGAGTTGTGGTAACTGGGGCAGGGGTTCCGGTAGGGCCCAGTGTAGTTGGGCTTGTTaGGAATGCGGACTCGCCTCT +
Preference number: 4 (lower is better)
Translates to: GPAGLSCGNWGRGSGRAQCSWAC*ECGLAS
Trigger: AGAGGCGAGTCCGCATTCCCAACAAGCCCAACTACA...CTGGGCCCTACCGGAACCCCTGCCCCAGTTACCACAACTCAGGCCGGCTGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAACCGGCATGGGGATCCTaGAGAGCTCCCGGCCGATGC +
Preference number: 4 (lower is better)
Translates to: AGENPGQPFLLPRWESQEPAWGS*RAPGRC
Trigger: GCATCGGCCGGGAGCTCTCCAGGATCCCCATGCCGG...TTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp TCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGAGCTCCCCGGCATGGGGATCCTaGAGAGCTCCCGGCCGATGC +
Preference number: 4 (lower is better)
Translates to: STWGLPSVPPPASVDGSSPAWGS*RAPGRC
Trigger: GCATCGGCCGGGAGCTCTCCAGGATCCCCATGCCGG...GGAGCTCCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp AGTTCCTCCCTGGGTTGGGGGCTGGTGATTTGCGCAGCCCATGGCCCGGGCCAGTTGTCCAGCAGGTGGTaGTACTCCAGGTCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: SSSLGWGLVICAAHGPGQLSSRW*YSRSSV
Trigger: GACAGAGGACCTGGAGTACCACCACCTGCTGGACAA...CTGGCCCGGGCCATGGGCTGCGCAAATCACCAGCCCCCAACCCAGGGAGGAACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGGCCAGCCGGCCTGAGTTGTGGTAACTGGGGCAGGGGTTCCGGTAGGGCCCAGGGCAGGAACTTCAGCTaGCACCGGTCATTGGTCTTA +
Preference number: 4 (lower is better)
Translates to: GPAGLSCGNWGRGSGRAQGRNFS*HRSLVL
Trigger: TAAGACCAATGACCGGTGCCAGCTGAAGTTCCTGCC...CTGGGCCCTACCGGAACCCCTGCCCCAGTTACCACAACTCAGGCCGGCTGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGTTCCGGTAGGGCCCAGGTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCTCCGGGCTGCCTCTTTaGAGAAGTAGCTGTAGGGCA +
Preference number: 4 (lower is better)
Translates to: GSGRAQVHNEGARVTRRTSGLPL*RSSCRA
Trigger: TGCCCTACAGCTACTTCTCCAAAGAGGCAGCCCGGA...GGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGACCTGGGCCCTACCGGAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp TGGGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCGCTTCCCGTCAGAGCTaGGGCTGCTGGGACTGCTAT +
Preference number: 4 (lower is better)
Translates to: WGLERTQVSPSSFQGGSPASRQS*GCWDCY
Trigger: ATAGCAGTCCCAGCAGCCCCAGCTCTGACGGGAAGC...GGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000535268.5
CDS-3UTR CCA 90 bp GCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAACAGGCGGCTGTCGGTTaGCGCTACGCCCTCCTCGTG +
Preference number: 4 (lower is better)
Translates to: AGENPGQPFLLPRWESQEQAAVG*RYALLV
Trigger: CACGAGGAGGGCGTAGCGCCAACCGACAGCCGCCTG...TTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAATTCTCCATCAGCCGCTaGTCGGGCCGCAGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: AGENPGQPFLLPRWESQEFSISR*SGRRRL
Trigger: CAGCCGCCTGCGGCCCGACCAGCGGCTGATGGAGAA...TTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGGATGCAAGGTCTCTGGTGCCCAGGTCACCAGCCCAGGCTGGGCCAAGGGTTTGCTGCTTCTCGGTATTaGCCTCGTCCCAACGGCCCT +
Preference number: 4 (lower is better)
Translates to: GMQGLWCPGHQPRLGQGFAASRY*PRPNGP
Trigger: AGGGCCGTTGGGACGAGGCCAATACCGAGAAGCAGC...AAACCCTTGGCCCAGCCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCATCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp TGGGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCGCTGCTTCTCGGTATTaGCCTCGTCCCAACGGCCCT +
Preference number: 4 (lower is better)
Translates to: WGLERTQVSPSSFQGGSPAASRY*PRPNGP
Trigger: AGGGCCGTTGGGACGAGGCCAATACCGAGAAGCAGC...GGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp AGTTCCTCCCTGGGTTGGGGGCTGGTGATTTGCGCAGCCCATGGCCCGGGCCAGCTTCTCAAACCACAGTaGCGTGTAGGCATCCGCCTC +
Preference number: 4 (lower is better)
Translates to: SSSLGWGLVICAAHGPGQLLKPQ*RVGIRL
Trigger: GAGGCGGATGCCTACACGCCACTGTGGTTTGAGAAG...CTGGCCCGGGCCATGGGCTGCGCAAATCACCAGCCCCCAACCCAGGGAGGAACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGTTCCGGTAGGGCCCAGGTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCCTTCTCAAACCACAGTaGCGTGTAGGCATCCGCCTC +
Preference number: 4 (lower is better)
Translates to: GSGRAQVHNEGARVTRRTLLKPQ*RVGIRL
Trigger: GAGGCGGATGCCTACACGCCACTGTGGTTTGAGAAG...GGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGACCTGGGCCCTACCGGAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAGTGACCCGGCGCACCTaGGGGCTGGAGAGAACCCAG +
Preference number: 4 (lower is better)
Translates to: AGENPGQPFLLPRWESQEVTRRT*GLERTQ
Trigger: CTGGGTTCTCTCCAGCCCCCAGGTGCGCCGGGTCAC...TTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAGTGACCCGGCGCACCTaGGGGCTGGAGAGAACCCAG +
Preference number: 4 (lower is better)
Translates to: PGQPFLLPRWESQESVGRVTRRT*GLERTQ
Trigger: CTGGGTTCTCTCCAGCCCCCAGGTGCGCCGGGTCAC...TCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CAGGTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCTGGGGGCTGGAGAGACTGAGTTGTGGTAACTaGGGCAGGGGTTCCGGTAGG +
Preference number: 4 (lower is better)
Translates to: QVHNEGARVTRRTWGLERLSCGN*GRGSGR
Trigger: CCTACCGGAACCCCTGCCCCAGTTACCACAACTCAG...TCTCTCCAGCCCCCAGGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGACCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CCTTGGCCTCCCAGTAGCCGCCCTTGTACACACAGGCCATCTCCCCGGTCAGCGCTGAGTTGTGGTAACTaGGGCAGGGGTTCCGGTAGG +
Preference number: 4 (lower is better)
Translates to: PWPPSSRPCTHRPSPRSALSCGN*GRGSGR
Trigger: CCTACCGGAACCCCTGCCCCAGTTACCACAACTCAG...CGCTGACCGGGGAGATGGCCTGTGTGTACAAGGGCGGCTACTGGGAGGCCAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452656.5
CDS-3UTR CCA 90 bp CTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGATTTGCGCAGCCCATaGCCCGGGCCAGCCGGCCTG +
Preference number: 4 (lower is better)
Translates to: LERTQVSPSSFQGGSPKKDLRSP*PGPAGL
Trigger: CAGGCCGGCTGGCCCGGGCCATGGGCTGCGCAAATC...TTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGGCCAGCCGGCCTGAGTTGTGGTAACTGGGGCAGGGGTTCCGGTAGGGCCCAGGCCCTCAAATCCACATaGGGGTTACCATCAGTACCC +
Preference number: 4 (lower is better)
Translates to: GPAGLSCGNWGRGSGRAQALKST*GLPSVP
Trigger: GGGTACTGATGGTAACCCCCATGTGGATTTGAGGGC...CTGGGCCCTACCGGAACCCCTGCCCCAGTTACCACAACTCAGGCCGGCTGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAGAGGGGCTGGGTCAGTaGCCATGGTGGTCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: PGQPFLLPRWESQESVGREGLGQ*PWWSSP
Trigger: GGGGCTGGACCACCATGGCCACTGACCCAGCCCCTC...TCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp TCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGAGCTCCGAGGGGCTGGGTCAGTaGCCATGGTGGTCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: STWGLPSVPPPASVDGSSEGLGQ*PWWSSP
Trigger: GGGGCTGGACCACCATGGCCACTGACCCAGCCCCTC...GGAGCTCCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAGAGGGGCTGGGTCAGTaGCCATGGTGGTCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: AGENPGQPFLLPRWESQEEGLGQ*PWWSSP
Trigger: GGGGCTGGACCACCATGGCCACTGACCCAGCCCCTC...TTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGGCCAAGGGTTTGTTCATTATTGCTGATTTGGGGCCTGGGTCTCAGGGCGGGGGGAGAGGCAGGCGCCTaGCGTGGCCCTGCTGTTCTC +
Preference number: 4 (lower is better)
Translates to: GPRVCSLLLIWGLGLRAGGEAGA*RGPAVL
Trigger: GAGAACAGCAGGGCCACGCCAGGCGCCTGCCTCTCC...CCCCGCCCTGAGACCCAGGCCCCAAATCAGCAATAATGAACAAACCCTTGGCCC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000431368.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCATCCTGGCTGTGCTGTaGGGAGAGGCAGGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: GQGLLPSNPHGGYHQYPLILAVL*GEAGAW
Trigger: CCAGGCGCCTGCCTCTCCCCACAGCACAGCCAGGAT...GAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000431368.5
ENST00000535268.5
CDS-3UTR TCA 90 bp CAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAACCAGCTCCAGGGCGGTaGTCCACTGCTGCCGGTCCA +
Preference number: 4 (lower is better)
Translates to: QVSPSSFQGGSPKKVWGEPAPGR*STAAGP
Trigger: TGGACCGGCAGCAGTGGATCACCGCCCTGGAGCTGG...TTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000438716.3
CDS-3UTR TCA 90 bp AGTTCCTCCCTGGGTTGGGGGCTGGTGATTTGCGCAGCCCATGGCCCGGGCCAGGGTCATTGCACGTGCTaGGGTCATCTAACTTCAGGG +
Preference number: 4 (lower is better)
Translates to: SSSLGWGLVICAAHGPGQGHCTC*GHLTSG
Trigger: CCCTGAAGTTAGATGACCTCAGCACGTGCAATGACC...CTGGCCCGGGCCATGGGCTGCGCAAATCACCAGCCCCCAACCCAGGGAGGAACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000437268.6
CDS-3UTR TCA 90 bp AGGAGGGATGCAAGGTCTCTGGTGCCCAGGTCACCAGCCCAGGCTGGGCCAAGGTCTCAGATGGGATCTTaGGGCCGTCCAGCTCTGTCA +
Preference number: 4 (lower is better)
Translates to: RRDARSLVPRSPAQAGPRSQMGS*GRPALS
Trigger: TGACAGAGCTGGACGGCCTCAAGATCCCATCTGAGA...CCTTGGCCCAGCCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCATCCCTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000437268.6
CDS-3UTR TCA 90 bp GTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCTGGGGGCTGGAGAGAACCCCTCTTGACTTTGGATaGACCCTTGGGCACGAGCGA +
Preference number: 4 (lower is better)
Translates to: VHNEGARVTRRTWGLERTPLDFG*TLGHER
Trigger: TCGCTCGTGCCCAAGGGTTCATCCAAAGTCAAGAGG...GGTTCTCTCCAGCCCCCAGGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp CAGGTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCTGGGGGCTGGAGAGACCTCTTGACTTTGGATaGACCCTTGGGCACGAGCGA +
Preference number: 4 (lower is better)
Translates to: QVHNEGARVTRRTWGLERPLDFG*TLGHER
Trigger: TCGCTCGTGCCCAAGGGTTCATCCAAAGTCAAGAGG...TCTCTCCAGCCCCCAGGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGACCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp GCTTCTCCTTGGCCTCCCAGTAGCCGCCCTTGTACACACAGGCCATCTCCCCGGTGGACAGGGGCTCATTaGAGTTCACCGGCATGGGGA +
Preference number: 4 (lower is better)
Translates to: ASPWPPSSRPCTHRPSPRWTGAH*SSPAWG
Trigger: TCCCCATGCCGGTGAACTTCAATGAGCCCCTGTCCA...CCGGGGAGATGGCCTGTGTGTACAAGGGCGGCTACTGGGAGGCCAAGGAGAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000452656.5
CDS-3UTR TCA 90 bp TGGGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCACTTGCTGGAGATGGTaGTCTCCTGCCAGAGGCTCC +
Preference number: 4 (lower is better)
Translates to: WGLERTQVSPSSFQGGSPTCWRW*SPARGS
Trigger: GGAGCCTCTGGCAGGAGATCACCATCTCCAGCAAGT...GGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp GGGATGCAAGGTCTCTGGTGCCCAGGTCACCAGCCCAGGCTGGGCCAAGGGTTTACTTGCTGGAGATGGTaGTCTCCTGCCAGAGGCTCC +
Preference number: 4 (lower is better)
Translates to: GMQGLWCPGHQPRLGQGFTCWRW*SPARGS
Trigger: GGAGCCTCTGGCAGGAGATCACCATCTCCAGCAAGT...AAACCCTTGGCCCAGCCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCATCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp GGTTCCGGTAGGGCCCAGGTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCTGGCACCTAGCGGCATaGTGGAGATGTATTTTCCCC +
Preference number: 4 (lower is better)
Translates to: GSGRAQVHNEGARVTRRTWHLAA*WRCIFP
Trigger: GGGGAAAATACATCTCCATCATGCCGCTAGGTGCCA...GGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGACCTGGGCCCTACCGGAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp AGTTCCTCCCTGGGTTGGGGGCTGGTGATTTGCGCAGCCCATGGCCCGGGCCAGAATCTCGATGTCCCCTaGCTGGTCGATCCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: SSSLGWGLVICAAHGPGQNLDVP*LVDPEL
Trigger: AAGCTCTGGATCGACCAGTCAGGGGACATCGAGATT...CTGGCCCGGGCCATGGGCTGCGCAAATCACCAGCCCCCAACCCAGGGAGGAACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp GCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAACCTCCTCGTGCTCGTTaGGGGTCAGGGCCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: AGENPGQPFLLPRWESQEPPRAR*GSGPAL
Trigger: CAGAGCTGGCCCTGACCCTCAACGAGCACGAGGAGG...TTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp CAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAACCGGGCCAGCCGGCCTaGGTTGTGGTAACTGGGGCA +
Preference number: 4 (lower is better)
Translates to: QVSPSSFQGGSPKKVWGEPGQPA*VVVTGA
Trigger: TGCCCCAGTTACCACAACTCAGGCCGGCTGGCCCGG...TTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp GGGCCAAGGGTTTGTTCATTATTGCTGATTTGGGGCCTGGGTCTCAGGGCGGGGTGGGTTGGGGGCTGGTaGTTTGCGCAGCCCATGGCC +
Preference number: 4 (lower is better)
Translates to: GPRVCSLLLIWGLGLRAGWVGGW*FAQPMA
Trigger: GGCCATGGGCTGCGCAAATCACCAGCCCCCAACCCA...CCCCGCCCTGAGACCCAGGCCCCAAATCAGCAATAATGAACAAACCCTTGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp CCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGATGGGTTGGGGGCTGGTaGTTTGCGCAGCCCATGGCC +
Preference number: 4 (lower is better)
Translates to: PGQPFLLPRWESQESVGRWVGGW*FAQPMA
Trigger: GGCCATGGGCTGCGCAAATCACCAGCCCCCAACCCA...TCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp GGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGCGCTTCGCTGCCAGTaGCGACATCGTTCGGGTTCT +
Preference number: 4 (lower is better)
Translates to: GAGENPGQPFLLPRWESQALRCQ*RHRSGS
Trigger: AGAACCCGAACGATGTCGTCACTGGCAGCGAAGCGC...TTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403222.7
ENST00000407373.5
ENST00000438716.3
CDS-3UTR GCA 90 bp CCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAGGAGAGCGGCTCCGATaGGGCCTTAGTGAAGGGCCC +
Preference number: 4 (lower is better)
Translates to: PGQPFLLPRWESQESVGRGERLR*GLSEGP
Trigger: GGGCCCTTCACTAAGGCCGCATCGGAGCCGCTCTCC...TCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332585.11
CDS-3UTR GCA 90 bp AGGAGGGATGCAAGGTCTCTGGTGCCCAGGTCACCAGCCCAGGCTGGGCCAAGGTCCTCCGTGTCAATGTaGGCGGTGGACAGGTTGATG +
Preference number: 4 (lower is better)
Translates to: RRDARSLVPRSPAQAGPRSSVSM*AVDRLM
Trigger: CATCAACCTGTCCACCGCGCACATTGACACGGAGGA...CCTTGGCCCAGCCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCATCCCTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
CDS-3UTR GCA 90 bp GGCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCGCGGTGATCCACTGCTaGCGGTCCACCTCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: GQGLLPSNPHGGYHQYPLAVIHC*RSTSEL
Trigger: CAGCTCAGAGGTGGACCGGCAGCAGTGGATCACCGC...GAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
CDS-3UTR GCA 90 bp TCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGAGCTCCCAGGGAGCGCTGGAGTaGAGCGCCGTGCTTGGCGAT +
Preference number: 4 (lower is better)
Translates to: STWGLPSVPPPASVDGSSQGALE*SAVLGD
Trigger: ATCGCCAAGCACGGCGCTGCACTCCAGCGCTCCCTG...GGAGCTCCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000437268.6
CDS-3UTR GCA 90 bp GTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCTGGGGGCTGGAGAGAACCATGGTTTCCTCCAAGTaGACGCGCTGCTCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: VHNEGARVTRRTWGLERTMVSSK*TRCSCS
Trigger: TGAGCAGGAGCAGCGCGTGCACTTGGAGGAAACCAT...GGTTCTCTCCAGCCCCCAGGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp CAGGTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCTGGGGGCTGGAGAGAATGGTTTCCTCCAAGTaGACGCGCTGCTCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: QVHNEGARVTRRTWGLERMVSSK*TRCSCS
Trigger: TGAGCAGGAGCAGCGCGTGCACTTGGAGGAAACCAT...TCTCTCCAGCCCCCAGGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGACCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp AGGAGGGATGCAAGGTCTCTGGTGCCCAGGTCACCAGCCCAGGCTGGGCCAAGGTCGAGGCTGTTGTGCTaGTTCGCCAGCTGCTCAATG +
Preference number: 4 (lower is better)
Translates to: RRDARSLVPRSPAQAGPRSRLLC*FASCSM
Trigger: CATTGAGCAGCTGGCGAAGCAGCACAACAGCCTCGA...CCTTGGCCCAGCCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCATCCCTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp TGGGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCACTGAGCTGGTGCAGTaGACTGCCTTGTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: WGLERTQVSPSSFQGGSPTELVQ*TALSSR
Trigger: CCTGCTGGACAAGGCAGTGCACTGCACCAGCTCAGT...GGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp TGGGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCGCTCCACTGAGCTGGTaGAGTGCACTGCCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: WGLERTQVSPSSFQGGSPAPLSW*SALPCP
Trigger: TGGACAAGGCAGTGCACTGCACCAGCTCAGTGGAGC...GGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGCCACCAGGCACATCTaGTCCACTGAGCTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: GAGENPGQPFLLPRWESQATRHI*STELVQ
Trigger: CTGCACCAGCTCAGTGGAGCAGATGTGCCTGGTGGC...TTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GGGCCAAGGGTTTGTTCATTATTGCTGATTTGGGGCCTGGGTCTCAGGGCGGGGGGGTGGTGGCTCACCTaGTCACAGAGGGAGCGCAGG +
Preference number: 4 (lower is better)
Translates to: GPRVCSLLLIWGLGLRAGGWWLT*SQRERR
Trigger: CCTGCGCTCCCTCTGTGAGCAGGTGAGCCACCACCC...CCCCGCCCTGAGACCCAGGCCCCAAATCAGCAATAATGAACAAACCCTTGGCCC
62% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp CCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAGGGTGGTGGCTCACCTaGTCACAGAGGGAGCGCAGG +
Preference number: 4 (lower is better)
Translates to: PGQPFLLPRWESQESVGRGWWLT*SQRERR
Trigger: CCTGCGCTCCCTCTGTGAGCAGGTGAGCCACCACCC...TCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAGGGTGGTGGCTCACCTaGTCACAGAGGGAGCGCAGG +
Preference number: 4 (lower is better)
Translates to: AGENPGQPFLLPRWESQEGWWLT*SQRERR
Trigger: CCTGCGCTCCCTCTGTGAGCAGGTGAGCCACCACCC...TTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp TGGGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCGCACGTAATGGGCCTTaGCCTGGCTGTCACTCACCA +
Preference number: 4 (lower is better)
Translates to: WGLERTQVSPSSFQGGSPARNGP*PGCHSP
Trigger: TGGTGAGTGACAGCCAGGGCAAGGCCCATTACGTGC...GGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000535268.5
CDS-3UTR GCA 90 bp AGGAGGGATGCAAGGTCTCTGGTGCCCAGGTCACCAGCCCAGGCTGGGCCAAGGCTGCTGGGACTGCTATaGATGACCTTGGAGCACTCC +
Preference number: 4 (lower is better)
Translates to: RRDARSLVPRSPAQAGPRLLGLL*MTLEHS
Trigger: GGAGTGCTCCAAGGTCATGCATAGCAGTCCCAGCAG...CCTTGGCCCAGCCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCATCCCTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000535268.5
CDS-3UTR GCA 90 bp GTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCTGGGGGCTGGAGAGAACCTGGTACACTGTCTTCTaGTTCCCGTCAGAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: VHNEGARVTRRTWGLERTWYTVF*FPSELG
Trigger: CCCCAGCTCTGACGGGAAGCAGAAGACAGTGTACCA...GGTTCTCTCCAGCCCCCAGGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000535268.5
CDS-3UTR GCA 90 bp CAGGTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCTGGGGGCTGGAGAGATGGTACACTGTCTTCTaGTTCCCGTCAGAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: QVHNEGARVTRRTWGLERWYTVF*FPSELG
Trigger: CCCCAGCTCTGACGGGAAGCAGAAGACAGTGTACCA...TCTCTCCAGCCCCCAGGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGACCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000535268.5
CDS-3UTR GCA 90 bp CCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAGCTACGCCCTCCTCGTaGTCGTTGAGGGTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: PGQPFLLPRWESQESVGRATPSS*SLRVRA
Trigger: GGCCCTGACCCTCAACGAGCACGAGGAGGGCGTAGC...TCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp TCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGAGCTCCGCTACGCCCTCCTCGTaGTCGTTGAGGGTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: STWGLPSVPPPASVDGSSATPSS*SLRVRA
Trigger: GGCCCTGACCCTCAACGAGCACGAGGAGGGCGTAGC...GGAGCTCCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAGCTACGCCCTCCTCGTaGTCGTTGAGGGTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: AGENPGQPFLLPRWESQEATPSS*SLRVRA
Trigger: GGCCCTGACCCTCAACGAGCACGAGGAGGGCGTAGC...TTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GGGCCAAGGGTTTGTTCATTATTGCTGATTTGGGGCCTGGGTCTCAGGGCGGGGGCTACGCCCTCCTCGTaGTCGTTGAGGGTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: GPRVCSLLLIWGLGLRAGATPSS*SLRVRA
Trigger: GGCCCTGACCCTCAACGAGCACGAGGAGGGCGTAGC...CCCCGCCCTGAGACCCAGGCCCCAAATCAGCAATAATGAACAAACCCTTGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp CTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGCGCCGCGACAGGCGCTaGTTCTCCTCCAGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: LKSTWGLPSVPPPASVDGRRDRR*FSSSRC
Trigger: GCAGCGGCTGGAGGAGAAGCAGCGCCTGTCGCGGCG...CCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp AGGAGGGATGCAAGGTCTCTGGTGCCCAGGTCACCAGCCCAGGCTGGGCCAAGGGGCGCCTGTATTTGTTaGAAGGGTGGCGCTCAGAAG +
Preference number: 4 (lower is better)
Translates to: RRDARSLVPRSPAQAGPRGACIC*KGGAQK
Trigger: CTTCTGAGCGCCACCCTTGCAACAAATACAGGCGCC...CCTTGGCCCAGCCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCATCCCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp TGGGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAGGTGGGCCAGGCTGTaGAGGCGCCTGTATTTGTTG +
Preference number: 4 (lower is better)
Translates to: WGLERTQVSPSSFQGGSPRWARL*RRLYLL
Trigger: CAACAAATACAGGCGCCTGCACAGCCTGGCCCACCT...GGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCAGAAACTCTGTGCTCTaGTGGGCTGGGGCAGCCCCC +
Preference number: 4 (lower is better)
Translates to: ARDCCPQIHMGVTISTPSRNSVL*WAGAAP
Trigger: GGGGGCTGCCCCAGCCCAGCAGAGCACAGAGTTTCT...GGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGCTCCAGAAACTCTGTaGTCTGCTGGGCTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: GAGENPGQPFLLPRWESQAPETL*SAGLGQ
Trigger: CTGCCCCAGCCCAGCAGAGCACAGAGTTTCTGGAGC...TTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp CCTTGGCCTCCCAGTAGCCGCCCTTGTACACACAGGCCATCTCCCCGGTCAGCGATCAGTACCCCCTCCTaGATCTGTGGATGGGAGCTC +
Preference number: 4 (lower is better)
Translates to: PWPPSSRPCTHRPSPRSAISTPS*ICGWEL
Trigger: GAGCTCCCATCCACAGATGCAGGAGGGGGTACTGAT...CGCTGACCGGGGAGATGGCCTGTGTGTACAAGGGCGGCTACTGGGAGGCCAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452656.5
CDS-3UTR GCA 90 bp CCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGAGGGCGGGGAGCACCTaGAGGCCCTGCCTTCCAGCC +
Preference number: 4 (lower is better)
Translates to: PQIHMGVTISTPSCICGWRAGST*RPCLPA
Trigger: GGCTGGAAGGCAGGGCCTGCAGGTGCTCCCCGCCCT...CCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp CTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGAGGGCGGGGAGCACCTaGAGGCCCTGCCTTCCAGCC +
Preference number: 4 (lower is better)
Translates to: LKSTWGLPSVPPPASVDGRAGST*RPCLPA
Trigger: GGCTGGAAGGCAGGGCCTGCAGGTGCTCCCCGCCCT...CCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAATGCAAGGTCTCTGGTaGCCAGGTCACCAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: GAGENPGQPFLLPRWESQMQGLW*PGHQPR
Trigger: CCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCAT...TTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAACTGGCCTACGGTTCATaGCAAGGCGCTTCGCTGCCA +
Preference number: 4 (lower is better)
Translates to: GAGENPGQPFLLPRWESQLAYGS*QGASLP
Trigger: TGGCAGCGAAGCGCCTTGGCATGAACCGTAGGCCAG...TTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403222.7
ENST00000407373.5
ENST00000438716.3
CDS-3UTR CCA 90 bp GCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCCTCGCTCTTGTCGGCTaGGGTGGTAGCCTCGTCGTC +
Preference number: 4 (lower is better)
Translates to: ARDCCPQIHMGVTISTPSLALVG*GGSLVV
Trigger: GACGACGAGGCTACCACCCCAGCCGACAAGAGCGAG...GGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000437268.6
CDS-3UTR CCA 90 bp CAGGTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCTGGGGGCTGGAGAGATCGCCAGCTGCTCAATaGTTTCCTCCAAGTGCACGC +
Preference number: 4 (lower is better)
Translates to: QVHNEGARVTRRTWGLERSPAAQ*FPPSAR
Trigger: GCGTGCACTTGGAGGAAACCATTGAGCAGCTGGCGA...TCTCTCCAGCCCCCAGGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGACCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAAAAGCTCTTGGAGGGGTTaGCCGGCCGGCCAGGGGCAC +
Preference number: 4 (lower is better)
Translates to: GQPFLLPRWESQESVGRKSSWRG*PAGQGH
Trigger: GTGCCCCTGGCCGGCCGGCCAACCCCTCCAAGAGCT...TTTTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCTGGGGGCTGGAGAGAACCCTTTGGATGAACCCTTaGGCACGAGCGAGGCACCAT +
Preference number: 4 (lower is better)
Translates to: VHNEGARVTRRTWGLERTLWMNP*ARARHH
Trigger: ATGGTGCCTCGCTCGTGCCCAAGGGTTCATCCAAAG...GGTTCTCTCCAGCCCCCAGGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp AGGAGGGATGCAAGGTCTCTGGTGCCCAGGTCACCAGCCCAGGCTGGGCCAAGGTCTGCTCCACTGAGCTaGTGCAGTGCACTGCCTTGT +
Preference number: 4 (lower is better)
Translates to: RRDARSLVPRSPAQAGPRSAPLS*CSALPC
Trigger: ACAAGGCAGTGCACTGCACCAGCTCAGTGGAGCAGA...CCTTGGCCCAGCCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCATCCCTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CCTTGGCCTCCCAGTAGCCGCCCTTGTACACACAGGCCATCTCCCCGGTCAGCGTCTGCTCCACTGAGCTaGTGCAGTGCACTGCCTTGT +
Preference number: 4 (lower is better)
Translates to: PWPPSSRPCTHRPSPRSASAPLS*CSALPC
Trigger: ACAAGGCAGTGCACTGCACCAGCTCAGTGGAGCAGA...CGCTGACCGGGGAGATGGCCTGTGTGTACAAGGGCGGCTACTGGGAGGCCAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452656.5
CDS-3UTR CCA 90 bp AGGAGGGATGCAAGGTCTCTGGTGCCCAGGTCACCAGCCCAGGCTGGGCCAAGGTGCGGTGCACTGTGGTaGAGTAGGAGGACACAGAGA +
Preference number: 4 (lower is better)
Translates to: RRDARSLVPRSPAQAGPRCGALW*SRRTQR
Trigger: TCTCTGTGTCCTCCTACTCCACCACAGTGCACCGCA...CCTTGGCCCAGCCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCATCCCTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CAGGTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCTGGGGGCTGGAGAGATGCGGTGCACTGTGGTaGAGTAGGAGGACACAGAGA +
Preference number: 4 (lower is better)
Translates to: QVHNEGARVTRRTWGLERCGALW*SRRTQR
Trigger: TCTCTGTGTCCTCCTACTCCACCACAGTGCACCGCA...TCTCTCCAGCCCCCAGGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGACCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGTTCCGGTAGGGCCCAGGTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCGCCTGGAATTCTAAGTaGATGGCACCTAGCGGCATG +
Preference number: 4 (lower is better)
Translates to: GSGRAQVHNEGARVTRRTAWNSK*MAPSGM
Trigger: CATGCCGCTAGGTGCCATCCACTTAGAATTCCAGGC...GGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGACCTGGGCCCTACCGGAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGCTTCCCGTCAGAGCTaGGGCTGCTGGGACTGCTAT +
Preference number: 4 (lower is better)
Translates to: GAGENPGQPFLLPRWESQASRQS*GCWDCY
Trigger: ATAGCAGTCCCAGCAGCCCCAGCTCTGACGGGAAGC...TTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000535268.5
CDS-3UTR CCA 90 bp CAGGTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCTGGGGGCTGGAGAGACTTCTCAAACCACAGTaGCGTGTAGGCATCCGCCTC +
Preference number: 4 (lower is better)
Translates to: QVHNEGARVTRRTWGLERLLKPQ*RVGIRL
Trigger: GAGGCGGATGCCTACACGCCACTGTGGTTTGAGAAG...TCTCTCCAGCCCCCAGGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGACCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp TGGGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAGTCTTGCTTCTCCTTaGCCTCCCAGTAGCCGCCCT +
Preference number: 4 (lower is better)
Translates to: WGLERTQVSPSSFQGGSPSLASP*PPSSRP
Trigger: AGGGCGGCTACTGGGAGGCCAAGGAGAAGCAAGACT...GGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GCTTCTCCTTGGCCTCCCAGTAGCCGCCCTTGTACACACAGGCCATCTCCCCGGGCATTAATGAACAGGTaGGCCAGGCTGTGCAGGCGC +
Preference number: 4 (lower is better)
Translates to: ASPWPPSSRPCTHRPSPRALMNR*ARLCRR
Trigger: GCGCCTGCACAGCCTGGCCCACCTGTTCATTAATGC...CCGGGGAGATGGCCTGTGTGTACAAGGGCGGCTACTGGGAGGCCAAGGAGAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452656.5
CDS-3UTR CCA 90 bp GGGATGCAAGGTCTCTGGTGCCCAGGTCACCAGCCCAGGCTGGGCCAAGGGTTTGCATTAATGAACAGGTaGGCCAGGCTGTGCAGGCGC +
Preference number: 4 (lower is better)
Translates to: GMQGLWCPGHQPRLGQGFALMNR*ARLCRR
Trigger: GCGCCTGCACAGCCTGGCCCACCTGTTCATTAATGC...AAACCCTTGGCCCAGCCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCATCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGTTCCGGTAGGGCCCAGGTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCGGGCTGGGAATGGGCTaGGAGAAAGACCATTCAGTA +
Preference number: 4 (lower is better)
Translates to: GSGRAQVHNEGARVTRRTGLGMG*EKDHSV
Trigger: TACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCC...GGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGACCTGGGCCCTACCGGAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp AGTTCCTCCCTGGGTTGGGGGCTGGTGATTTGCGCAGCCCATGGCCCGGGCCAGGGGCTGGGAATGGGCTaGGAGAAAGACCATTCAGTA +
Preference number: 4 (lower is better)
Translates to: SSSLGWGLVICAAHGPGQGLGMG*EKDHSV
Trigger: TACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCC...CTGGCCCGGGCCATGGGCTGCGCAAATCACCAGCCCCCAACCCAGGGAGGAACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAGGCGCACCTGGGGGCTaGAGAGAACCCAGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: QVSPSSFQGGSPKKVWGEGAPGG*REPRSA
Trigger: GGCTGACCTGGGTTCTCTCCAGCCCCCAGGTGCGCC...TTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGGCGCACCTGGGGGCTaGAGAGAACCCAGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: LERTQVSPSSFQGGSPKKGAPGG*REPRSA
Trigger: GGCTGACCTGGGTTCTCTCCAGCCCCCAGGTGCGCC...TTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGACCCGGCGCACCTaGGGGCTGGAGAGAACCCAG +
Preference number: 4 (lower is better)
Translates to: LERTQVSPSSFQGGSPKKVTRRT*GLERTQ
Trigger: CTGGGTTCTCTCCAGCCCCCAGGTGCGCCGGGTCAC...TTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp TGGGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAGTTCCTCCCTGGGTTaGGGGCTGGTGATTTGCGCA +
Preference number: 4 (lower is better)
Translates to: WGLERTQVSPSSFQGGSPSSSLG*GLVICA
Trigger: TGCGCAAATCACCAGCCCCCAACCCAGGGAGGAACT...GGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp AGTTCCTCCCTGGGTTGGGGGCTGGTGATTTGCGCAGCCCATGGCCCGGGCCAGGCCCTCAAATCCACATaGGGGTTACCATCAGTACCC +
Preference number: 4 (lower is better)
Translates to: SSSLGWGLVICAAHGPGQALKST*GLPSVP
Trigger: GGGTACTGATGGTAACCCCCATGTGGATTTGAGGGC...CTGGCCCGGGCCATGGGCTGCGCAAATCACCAGCCCCCAACCCAGGGAGGAACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp AGTTCCTCCCTGGGTTGGGGGCTGGTGATTTGCGCAGCCCATGGCCCGGGCCAGTCATTATTGCTGATTTaGGGCCTGGGTCTCAGGGCG +
Preference number: 4 (lower is better)
Translates to: SSSLGWGLVICAAHGPGQSLLLI*GLGLRA
Trigger: CGCCCTGAGACCCAGGCCCCAAATCAGCAATAATGA...CTGGCCCGGGCCATGGGCTGCGCAAATCACCAGCCCCCAACCCAGGGAGGAACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCTGGGGGCTGGAGAGAACCGTCACCAGCCCAGGCTaGGCCAAGGGTTTGTTCATT +
Preference number: 4 (lower is better)
Translates to: VHNEGARVTRRTWGLERTVTSPG*AKGLFI
Trigger: AATGAACAAACCCTTGGCCCAGCCTGGGCTGGTGAC...GGTTCTCTCCAGCCCCCAGGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CAGGTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCTGGGGGCTGGAGAGAGTCACCAGCCCAGGCTaGGCCAAGGGTTTGTTCATT +
Preference number: 4 (lower is better)
Translates to: QVHNEGARVTRRTWGLERVTSPG*AKGLFI
Trigger: AATGAACAAACCCTTGGCCCAGCCTGGGCTGGTGAC...TCTCTCCAGCCCCCAGGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGACCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAAAAGCGGTGGCCCCAAGTaGCCGCCTCACCGCCTCCAC +
Preference number: 4 (lower is better)
Translates to: GQPFLLPRWESQESVGRKSGGPK*PPHRLH
Trigger: GTGGAGGCGGTGAGGCGGCCACTTGGGGCCACCGCT...TTTTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000403222.7
ENST00000407373.5
ENST00000438716.3
CDS-3UTR CCA 90 bp GGCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCCTGATTTCTGTCTGTaGGTCGCTCCTGCGGCCGCC +
Preference number: 4 (lower is better)
Translates to: GQGLLPSNPHGGYHQYPLPDFCL*VAPAAA
Trigger: GGCGGCCGCAGGAGCGACCCACAGACAGAAATCAGG...GAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000403222.7
ENST00000407373.5
CDS-3UTR CCA 90 bp CCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGCCTGATTTCTGTCTGTaGGTCGCTCCTGCGGCCGCC +
Preference number: 4 (lower is better)
Translates to: PRSALPPSKVGVPRKCGEPDFCL*VAPAAA
Trigger: GGCGGCCGCAGGAGCGACCCACAGACAGAAATCAGG...CTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403222.7
ENST00000407373.5
ENST00000438716.3
CDS-3UTR TCA 90 bp TCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGAGCTCCGCGCGGTGGACAGGTTaGTGGTTCCACGGCACGTGT +
Preference number: 4 (lower is better)
Translates to: STWGLPSVPPPASVDGSSARWTG*WFHGTC
Trigger: ACACGTGCCGTGGAACCATCAACCTGTCCACCGCGC...GGAGCTCCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
CDS-3UTR TCA 90 bp CTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGCCAGCTCCAGGGCGGTaGTCCACTGCTGCCGGTCCA +
Preference number: 4 (lower is better)
Translates to: LKSTWGLPSVPPPASVDGPAPGR*STAAGP
Trigger: TGGACCGGCAGCAGTGGATCACCGCCCTGGAGCTGG...CCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
CDS-3UTR TCA 90 bp AGTTCCTCCCTGGGTTGGGGGCTGGTGATTTGCGCAGCCCATGGCCCGGGCCAGCCAGAGTCATCTGAATaGGTGTTCATCACGCGGACA +
Preference number: 4 (lower is better)
Translates to: SSSLGWGLVICAAHGPGQPESSE*VFITRT
Trigger: TGTCCGCGTGATGAACACTCATTCAGATGACTCTGG...CTGGCCCGGGCCATGGGCTGCGCAAATCACCAGCCCCCAACCCAGGGAGGAACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
CDS-3UTR TCA 90 bp GTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCTGGGGGCTGGAGAGAACCGGTCATTGCACGTGCTaGGGTCATCTAACTTCAGGG +
Preference number: 4 (lower is better)
Translates to: VHNEGARVTRRTWGLERTGHCTC*GHLTSG
Trigger: CCCTGAAGTTAGATGACCTCAGCACGTGCAATGACC...GGTTCTCTCCAGCCCCCAGGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000437268.6
CDS-3UTR TCA 90 bp TGGGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAGAGGCTTCCCTCAATaGAGCTCTTGGAGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: WGLERTQVSPSSFQGGSPRGFPQ*SSWRGW
Trigger: CCAACCCCTCCAAGAGCTTCATTGAGGGAAGCCTCT...GGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp TGGGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCCCTCTTGACTTTGGATaGACCCTTGGGCACGAGCGA +
Preference number: 4 (lower is better)
Translates to: WGLERTQVSPSSFQGGSPPLDFG*TLGHER
Trigger: TCGCTCGTGCCCAAGGGTTCATCCAAAGTCAAGAGG...GGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp GGGATGCAAGGTCTCTGGTGCCCAGGTCACCAGCCCAGGCTGGGCCAAGGGTTTTGCGGACTCGCCTCTTaGCTTTGGATGAACCCTTGG +
Preference number: 4 (lower is better)
Translates to: GMQGLWCPGHQPRLGQGFCGLAS*LWMNPW
Trigger: CCAAGGGTTCATCCAAAGTCAAGAGGCGAGTCCGCA...AAACCCTTGGCCCAGCCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCATCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp CAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAACCCCCAGCATGGGGTTaGAGGGCTTGGCGATGCGGT +
Preference number: 4 (lower is better)
Translates to: QVSPSSFQGGSPKKVWGEPPAWG*RAWRCG
Trigger: ACCGCATCGCCAAGCCCTTCAACCCCATGCTGGGGG...TTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp GGTTCCGGTAGGGCCCAGGTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCGATGTTGTGAACAGTTaGGGTGCTCTTCCTCCACAC +
Preference number: 4 (lower is better)
Translates to: GSGRAQVHNEGARVTRRTDVVNS*GALPPH
Trigger: GTGTGGAGGAAGAGCACCTCAACTGTTCACAACATC...GGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGACCTGGGCCCTACCGGAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp GGTTCCGGTAGGGCCCAGGTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCCCCACGATGATGTTGTaGACAGTTGAGGTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: GSGRAQVHNEGARVTRRTPTMML*TVEVLF
Trigger: GAAGAGCACCTCAACTGTTCACAACATCATCGTGGG...GGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGACCTGGGCCCTACCGGAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp GGTTCCGGTAGGGCCCAGGTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCAGAGCTTGCCCACGATaGTGTTGTGAACAGTTGAGG +
Preference number: 4 (lower is better)
Translates to: GSGRAQVHNEGARVTRRTRACPR*CCEQLR
Trigger: CCTCAACTGTTCACAACATCATCGTGGGCAAGCTCT...GGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGACCTGGGCCCTACCGGAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp CAGGTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCTGGGGGCTGGAGAGAAATCTCGATGTCCCCTaGCTGGTCGATCCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: QVHNEGARVTRRTWGLERNLDVP*LVDPEL
Trigger: AAGCTCTGGATCGACCAGTCAGGGGACATCGAGATT...TCTCTCCAGCCCCCAGGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp AGGAGGGATGCAAGGTCTCTGGTGCCCAGGTCACCAGCCCAGGCTGGGCCAAGGAATCTCGATGTCCCCTaGCTGGTCGATCCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: RRDARSLVPRSPAQAGPRNLDVP*LVDPEL
Trigger: AAGCTCTGGATCGACCAGTCAGGGGACATCGAGATT...CCTTGGCCCAGCCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCATCCCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp AGTTCCTCCCTGGGTTGGGGGCTGGTGATTTGCGCAGCCCATGGCCCGGGCCAGTGGGACTGCTATGCATaGCCTTGGAGCACTCCATTT +
Preference number: 4 (lower is better)
Translates to: SSSLGWGLVICAAHGPGQWDCYA*PWSTPF
Trigger: AAATGGAGTGCTCCAAGGTCATGCATAGCAGTCCCA...CTGGCCCGGGCCATGGGCTGCGCAAATCACCAGCCCCCAACCCAGGGAGGAACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000535268.5
CDS-3UTR TCA 90 bp CAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAACCTCCTCGTGCTCGTTaGGGGTCAGGGCCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: QVSPSSFQGGSPKKVWGEPPRAR*GSGPAL
Trigger: CAGAGCTGGCCCTGACCCTCAACGAGCACGAGGAGG...TTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp CTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAACCTCCTCGTGCTCGTTaGGGGTCAGGGCCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: LERTQVSPSSFQGGSPKKPPRAR*GSGPAL
Trigger: CAGAGCTGGCCCTGACCCTCAACGAGCACGAGGAGG...TTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp CTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGCCGGGCCAGCCGGCCTaGGTTGTGGTAACTGGGGCA +
Preference number: 4 (lower is better)
Translates to: LKSTWGLPSVPPPASVDGPGQPA*VVVTGA
Trigger: TGCCCCAGTTACCACAACTCAGGCCGGCTGGCCCGG...CCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp CAGGTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCTGGGGGCTGGAGAGACTCAAAGTGGGATTCTaGACTTGGACCTCCCGGGAT +
Preference number: 4 (lower is better)
Translates to: QVHNEGARVTRRTWGLERLKVGF*TWTSRD
Trigger: ATCCCGGGAGGTCCAAGTTCAGAATCCCACTTTGAG...TCTCTCCAGCCCCCAGGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407373.5
CDS-3UTR GCA 90 bp GGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAAAAGCAGTTCCGATGGCTaGCCAGCCCCTGGCTCCGGC +
Preference number: 4 (lower is better)
Translates to: GQPFLLPRWESQESVGRKSSSDG*PAPGSG
Trigger: GCCGGAGCCAGGGGCTGGGCAGCCATCGGAACTGCT...TTTTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000332585.11
CDS-3UTR GCA 90 bp TCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGAGCTCCGCGGTGATCCACTGCTaGCGGTCCACCTCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: STWGLPSVPPPASVDGSSAVIHC*RSTSEL
Trigger: CAGCTCAGAGGTGGACCGGCAGCAGTGGATCACCGC...GGAGCTCCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
CDS-3UTR GCA 90 bp TGGGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCTTCTTCAGGGTGTGGTaGAGCTCGCTCTTGTCGGCT +
Preference number: 4 (lower is better)
Translates to: WGLERTQVSPSSFQGGSPFFRVW*SSLLSA
Trigger: AGCCGACAAGAGCGAGCTGCACCACACCCTGAAGAA...GGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000437268.6
ENST00000438716.3
CDS-3UTR GCA 90 bp CTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAACAGGGAGCGCTGGAGTaGAGCGCCGTGCTTGGCGAT +
Preference number: 4 (lower is better)
Translates to: LERTQVSPSSFQGGSPKKQGALE*SAVLGD
Trigger: ATCGCCAAGCACGGCGCTGCACTCCAGCGCTCCCTG...TTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000437268.6
ENST00000438716.3
CDS-3UTR GCA 90 bp GTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCTGGGGGCTGGAGAGAACCTACTGCAGTGCCCGCTaGCATTTCCGACTGTGTATC +
Preference number: 4 (lower is better)
Translates to: VHNEGARVTRRTWGLERTYCSAR*HFRLCI
Trigger: GATACACAGTCGGAAATGGCAGCGGGCACTGCAGTA...GGTTCTCTCCAGCCCCCAGGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp TGGGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCCTGCTCATACTGCAGTaGCCGCTGCCATTTCCGACT +
Preference number: 4 (lower is better)
Translates to: WGLERTQVSPSSFQGGSPLLILQ*PLPFPT
Trigger: AGTCGGAAATGGCAGCGGGCACTGCAGTATGAGCAG...GGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GGGATGCAAGGTCTCTGGTGCCCAGGTCACCAGCCCAGGCTGGGCCAAGGGTTTTGCTCCTGCTCATACTaGAGTGCCCGCTGCCATTTC +
Preference number: 4 (lower is better)
Translates to: GMQGLWCPGHQPRLGQGFCSCSY*SARCHF
Trigger: GAAATGGCAGCGGGCACTGCAGTATGAGCAGGAGCA...AAACCCTTGGCCCAGCCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCATCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCGCTGGTGCAGTGCACTaGCTTGTCCAGCAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: ARDCCPQIHMGVTISTPSAGAVH*LVQQVV
Trigger: CACCACCTGCTGGACAAGGCAGTGCACTGCACCAGC...GGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAACTGAGCTGGTGCAGTaGACTGCCTTGTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: GAGENPGQPFLLPRWESQTELVQ*TALSSR
Trigger: CCTGCTGGACAAGGCAGTGCACTGCACCAGCTCAGT...TTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCGCCACCAGGCACATCTaGTCCACTGAGCTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: ARDCCPQIHMGVTISTPSATRHI*STELVQ
Trigger: CTGCACCAGCTCAGTGGAGCAGATGTGCCTGGTGGC...GGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp CTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGGGTGGTGGCTCACCTaGTCACAGAGGGAGCGCAGG +
Preference number: 4 (lower is better)
Translates to: LERTQVSPSSFQGGSPKKGWWLT*SQRERR
Trigger: CCTGCGCTCCCTCTGTGAGCAGGTGAGCCACCACCC...TTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGCACGTAATGGGCCTTaGCCTGGCTGTCACTCACCA +
Preference number: 4 (lower is better)
Translates to: GAGENPGQPFLLPRWESQARNGP*PGCHSP
Trigger: TGGTGAGTGACAGCCAGGGCAAGGCCCATTACGTGC...TTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000535268.5
CDS-3UTR GCA 90 bp GTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAAAACGCCGCGACAGGCGCTaGTTCTCCTCCAGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: VSPSSFQGGSPKKVWGEKRRDRR*FSSSRC
Trigger: GCAGCGGCTGGAGGAGAAGCAGCGCCTGTCGCGGCG...TTTTTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp TGGGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCGGCGCCTGTATTTGTTaGAAGGGTGGCGCTCAGAAG +
Preference number: 4 (lower is better)
Translates to: WGLERTQVSPSSFQGGSPGACIC*KGGAQK
Trigger: CTTCTGAGCGCCACCCTTGCAACAAATACAGGCGCC...GGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp CTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGTGGGGGCTGGTGATTTaGGCAGCCCATGGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: LKSTWGLPSVPPPASVDGWGLVI*AAHGPG
Trigger: GCCCGGGCCATGGGCTGCGCAAATCACCAGCCCCCA...CCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGAAACTCTGTGCTCTaGTGGGCTGGGGCAGCCCCC +
Preference number: 4 (lower is better)
Translates to: AGENPGQPFLLPRWESQERNSVL*WAGAAP
Trigger: GGGGGCTGCCCCAGCCCAGCAGAGCACAGAGTTTCT...TTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp CCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAGAAACTCTGTGCTCTaGTGGGCTGGGGCAGCCCCC +
Preference number: 4 (lower is better)
Translates to: PGQPFLLPRWESQESVGRRNSVL*WAGAAP
Trigger: GGGGGCTGCCCCAGCCCAGCAGAGCACAGAGTTTCT...TCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GGCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGGCCTACGGTTCATaGCAAGGCGCTTCGCTGCCA +
Preference number: 4 (lower is better)
Translates to: GQGLLPSNPHGGYHQYPLLAYGS*QGASLP
Trigger: TGGCAGCGAAGCGCCTTGGCATGAACCGTAGGCCAG...GAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000403222.7
ENST00000407373.5
CDS-3UTR GCA 90 bp CCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGCTGGCCTACGGTTCATaGCAAGGCGCTTCGCTGCCA +
Preference number: 4 (lower is better)
Translates to: PRSALPPSKVGVPRKCGELAYGS*QGASLP
Trigger: TGGCAGCGAAGCGCCTTGGCATGAACCGTAGGCCAG...CTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403222.7
ENST00000407373.5
ENST00000438716.3
CDS-3UTR GCA 90 bp CCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGTCTGTGGGTCGCTCCTaGGGCCGCCAGAAGCGGTGG +
Preference number: 4 (lower is better)
Translates to: PQIHMGVTISTPSCICGWSVGRS*GRQKRW
Trigger: CCACCGCTTCTGGCGGCCGCAGGAGCGACCCACAGA...CCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000403222.7
ENST00000407373.5
CDS-3UTR GCA 90 bp TGGAGCACTCCATTTGTTCATCCCACGAGCCGGACAGCACGTAATGGGCCTTGCCAGGACCAGCGTAGGTaGAGACTCTGCCCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: WSTPFVHPTSRTARNGPCQDQRR*RLCPGP
Trigger: GGGCCCAGGGCAGAGTCTGCACCTACGCTGGTCCTG...GCAAGGCCCATTACGTGCTGTCCGGCTCGTGGGATGAACAAATGGAGTGCTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433183.2
CDS-3UTR GCA 90 bp GCCTTCACACTGGGATGTCGGCTGCATAATACTGTTCTCTGCCCATGTGTGGACCTGTGGCGGGGCCCCTaGCAGCCCTACTCACGGCAG +
Preference number: 4 (lower is better)
Translates to: AFTLGCRLHNTVLCPCVDLWRGP*QPYSRQ
Trigger: CTGCCGTGAGTAGGGCTGGCAGGGGCCCCGCCACAG...GTCCACACATGGGCAGAGAACAGTATTATGCAGCCGACATCCCAGTGTGAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433183.2
CDS-3UTR GCA 90 bp CAGGTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCTGGGGGCTGGAGAGATTCTCCCTTCCGGGCTaGCTCTTTGGAGAAGTAGCT +
Preference number: 4 (lower is better)
Translates to: QVHNEGARVTRRTWGLERFSLPG*LFGEVA
Trigger: AGCTACTTCTCCAAAGAGGCAGCCCGGAAGGGAGAA...TCTCTCCAGCCCCCAGGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452656.5
CDS-3UTR CCA 90 bp GCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCAGTCTTCGCCTGTCCTaGTCGCAGAAGAGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: ARDCCPQIHMGVTISTPSSLRLS*SQKRQG
Trigger: CCCCTGCCTCTTCTGCGACCAGGACAGGCGAAGACT...GGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000332585.11
CDS-3UTR CCA 90 bp GGGATGCAAGGTCTCTGGTGCCCAGGTCACCAGCCCAGGCTGGGCCAAGGGTTTAGCTCCTGGCCCCACTaGTCAGCAAGATACCACAAG +
Preference number: 4 (lower is better)
Translates to: GMQGLWCPGHQPRLGQGFSSWPH*SARYHK
Trigger: CTTGTGGTATCTTGCTGACCAGTGGGGCCAGGAGCT...AAACCCTTGGCCCAGCCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCATCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
CDS-3UTR CCA 90 bp AGGAGGGATGCAAGGTCTCTGGTGCCCAGGTCACCAGCCCAGGCTGGGCCAAGGAGATTCTTCAGGGTGTaGTGCAGCTCGCTCTTGTCG +
Preference number: 4 (lower is better)
Translates to: RRDARSLVPRSPAQAGPRRFFRV*CSSLLS
Trigger: CGACAAGAGCGAGCTGCACCACACCCTGAAGAATCT...CCTTGGCCCAGCCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCATCCCTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000437268.6
CDS-3UTR CCA 90 bp GTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAAAACGGCCAGGGGCACTGTaGAAGGCCCGCTCGAGGCTG +
Preference number: 4 (lower is better)
Translates to: VSPSSFQGGSPKKVWGEKRPGAL*KARSRL
Trigger: CAGCCTCGAGCGGGCCTTCCACAGTGCCCCTGGCCG...TTTTTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGCCGGCATGGGGATCCTaGAGAGCTCCCGGCCGATGC +
Preference number: 4 (lower is better)
Translates to: PQIHMGVTISTPSCICGWPAWGS*RAPGRC
Trigger: GCATCGGCCGGGAGCTCTCCAGGATCCCCATGCCGG...CCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp TGGGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCTCTGCTCCACTGAGCTaGTGCAGTGCACTGCCTTGT +
Preference number: 4 (lower is better)
Translates to: WGLERTQVSPSSFQGGSPSAPLS*CSALPC
Trigger: ACAAGGCAGTGCACTGCACCAGCTCAGTGGAGCAGA...GGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp TGGGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCTGCGGTGCACTGTGGTaGAGTAGGAGGACACAGAGA +
Preference number: 4 (lower is better)
Translates to: WGLERTQVSPSSFQGGSPCGALW*SRRTQR
Trigger: TCTCTGTGTCCTCCTACTCCACCACAGTGCACCGCA...GGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGGCTCCAGCCATGCTTaGAGAACACGTAGTGCGCAG +
Preference number: 4 (lower is better)
Translates to: GAGENPGQPFLLPRWESQGSSHA*RTRSAQ
Trigger: CTGCGCACTACGTGTTCTCCAAGCATGGCTGGAGCC...TTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGGCCAGCCGGCCTGAGTTGTGGTAACTGGGGCAGGGGTTCCGGTAGGGCCCAGCGTAGTGATTCCCACTaGCCTGGAATTCTAAGTGGA +
Preference number: 4 (lower is better)
Translates to: GPAGLSCGNWGRGSGRAQRSDSH*PGILSG
Trigger: TCCACTTAGAATTCCAGGCCAGTGGGAATCACTACG...CTGGGCCCTACCGGAACCCCTGCCCCAGTTACCACAACTCAGGCCGGCTGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGGCCAGCCGGCCTGAGTTGTGGTAACTGGGGCAGGGGTTCCGGTAGGGCCCAGGCTGGCACCGGTCATTaGTCTTATGGTTCACAATCT +
Preference number: 4 (lower is better)
Translates to: GPAGLSCGNWGRGSGRAQAGTGH*SYGSQS
Trigger: AGATTGTGAACCATAAGACCAATGACCGGTGCCAGC...CTGGGCCCTACCGGAACCCCTGCCCCAGTTACCACAACTCAGGCCGGCTGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGGATGCAAGGTCTCTGGTGCCCAGGTCACCAGCCCAGGCTGGGCCAAGGGTTTTCCGGGCTGCCTCTTTaGAGAAGTAGCTGTAGGGCA +
Preference number: 4 (lower is better)
Translates to: GMQGLWCPGHQPRLGQGFSGLPL*RSSCRA
Trigger: TGCCCTACAGCTACTTCTCCAAAGAGGCAGCCCGGA...AAACCCTTGGCCCAGCCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCATCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGGCTTCCCGTCAGAGCTaGGGCTGCTGGGACTGCTAT +
Preference number: 4 (lower is better)
Translates to: PRSALPPSKVGVPRKCGEASRQS*GCWDCY
Trigger: ATAGCAGTCCCAGCAGCCCCAGCTCTGACGGGAAGC...CTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000535268.5
CDS-3UTR CCA 90 bp GCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCGCTGCTTCTCGGTATTaGCCTCGTCCCAACGGCCCT +
Preference number: 4 (lower is better)
Translates to: ARDCCPQIHMGVTISTPSAASRY*PRPNGP
Trigger: AGGGCCGTTGGGACGAGGCCAATACCGAGAAGCAGC...GGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGGCTGCTTCTCGGTATTaGCCTCGTCCCAACGGCCCT +
Preference number: 4 (lower is better)
Translates to: PRSALPPSKVGVPRKCGEAASRY*PRPNGP
Trigger: AGGGCCGTTGGGACGAGGCCAATACCGAGAAGCAGC...CTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CAGGTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCTGGGGGCTGGAGAGAGCCCTCAAATCCACATaGGGGTTACCATCAGTACCC +
Preference number: 4 (lower is better)
Translates to: QVHNEGARVTRRTWGLERALKST*GLPSVP
Trigger: GGGTACTGATGGTAACCCCCATGTGGATTTGAGGGC...TCTCTCCAGCCCCCAGGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp AGGAGGGATGCAAGGTCTCTGGTGCCCAGGTCACCAGCCCAGGCTGGGCCAAGGTCATTATTGCTGATTTaGGGCCTGGGTCTCAGGGCG +
Preference number: 4 (lower is better)
Translates to: RRDARSLVPRSPAQAGPRSLLLI*GLGLRA
Trigger: CGCCCTGAGACCCAGGCCCCAAATCAGCAATAATGA...CCTTGGCCCAGCCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCATCCCTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GCCTTCACACTGGGATGTCGGCTGCATAATACTGTTCTCTGCCCATGTGTGGACCCTCTCCTTTGCCTGTaGCGGGGCCCCTGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: AFTLGCRLHNTVLCPCVDPLLCL*RGPCQP
Trigger: GGGCTGGCAGGGGCCCCGCCACAGGCAAAGGAGAGG...GTCCACACATGGGCAGAGAACAGTATTATGCAGCCGACATCCCAGTGTGAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433183.2
CDS-3UTR TCA 90 bp CTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAACTGCCGGTCCACCTCTaGGCTGGCCTTGAGGTGGTA +
Preference number: 4 (lower is better)
Translates to: LERTQVSPSSFQGGSPKKLPVHL*AGLEVV
Trigger: TACCACCTCAAGGCCAGCTCAGAGGTGGACCGGCAG...TTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000438716.3
CDS-3UTR TCA 90 bp CAGGTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCTGGGGGCTGGAGAGACCAGAGTCATCTGAATaGGTGTTCATCACGCGGACA +
Preference number: 4 (lower is better)
Translates to: QVHNEGARVTRRTWGLERPESSE*VFITRT
Trigger: TGTCCGCGTGATGAACACTCATTCAGATGACTCTGG...TCTCTCCAGCCCCCAGGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGACCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
CDS-3UTR TCA 90 bp TGGGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCGTCCCCAGAGTCATCTaGATGAGTGTTCATCACGCG +
Preference number: 4 (lower is better)
Translates to: WGLERTQVSPSSFQGGSPVPRVI*MSVHHA
Trigger: CGCGTGATGAACACTCATTCAGATGACTCTGGGGAC...GGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000438716.3
CDS-3UTR TCA 90 bp GGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAATCTCAGATGGGATCTTaGGGCCGTCCAGCTCTGTCA +
Preference number: 4 (lower is better)
Translates to: GAGENPGQPFLLPRWESQSQMGS*GRPALS
Trigger: TGACAGAGCTGGACGGCCTCAAGATCCCATCTGAGA...TTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000437268.6
ENST00000438716.3
CDS-3UTR TCA 90 bp GGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAAACCCCCAGCATGGGGTTaGAGGGCTTGGCGATGCGGT +
Preference number: 4 (lower is better)
Translates to: GQPFLLPRWESQESVGRKPPAWG*RAWRCG
Trigger: ACCGCATCGCCAAGCCCTTCAACCCCATGCTGGGGG...TTTTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp GTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCTGGGGGCTGGAGAGAACCCCCACGATGATGTTGTaGACAGTTGAGGTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: VHNEGARVTRRTWGLERTPTMML*TVEVLF
Trigger: GAAGAGCACCTCAACTGTTCACAACATCATCGTGGG...GGTTCTCTCCAGCCCCCAGGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp AGGAGGGATGCAAGGTCTCTGGTGCCCAGGTCACCAGCCCAGGCTGGGCCAAGGAGAGCTTGCCCACGATaGTGTTGTGAACAGTTGAGG +
Preference number: 4 (lower is better)
Translates to: RRDARSLVPRSPAQAGPRRACPR*CCEQLR
Trigger: CCTCAACTGTTCACAACATCATCGTGGGCAAGCTCT...CCTTGGCCCAGCCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCATCCCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp CCTTGGCCTCCCAGTAGCCGCCCTTGTACACACAGGCCATCTCCCCGGTCAGCGAGAGCTTGCCCACGATaGTGTTGTGAACAGTTGAGG +
Preference number: 4 (lower is better)
Translates to: PWPPSSRPCTHRPSPRSARACPR*CCEQLR
Trigger: CCTCAACTGTTCACAACATCATCGTGGGCAAGCTCT...CGCTGACCGGGGAGATGGCCTGTGTGTACAAGGGCGGCTACTGGGAGGCCAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452656.5
CDS-3UTR TCA 90 bp TGGGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAATCTCGATGTCCCCTaGCTGGTCGATCCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: WGLERTQVSPSSFQGGSPNLDVP*LVDPEL
Trigger: AAGCTCTGGATCGACCAGTCAGGGGACATCGAGATT...GGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp AGGAGGGATGCAAGGTCTCTGGTGCCCAGGTCACCAGCCCAGGCTGGGCCAAGGTGGGACTGCTATGCATaGCCTTGGAGCACTCCATTT +
Preference number: 4 (lower is better)
Translates to: RRDARSLVPRSPAQAGPRWDCYA*PWSTPF
Trigger: AAATGGAGTGCTCCAAGGTCATGCATAGCAGTCCCA...CCTTGGCCCAGCCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCATCCCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000535268.5
CDS-3UTR TCA 90 bp GGAAGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCAATGAAGGGGCACGGGTaGCCCGGCGCACCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: GRAGNGLGERPFSTKLSAMKGHG*PGAPGG
Trigger: GCCCCCAGGTGCGCCGGGTCACCCGTGCCCCTTCAT...TGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp CCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAGGGCACAGCTCACATaGGGGCCAAACTCAGACAGG +
Preference number: 4 (lower is better)
Translates to: PRSALPPSKVGVPRKCGERAQLT*GPNSDR
Trigger: CCTGTCTGAGTTTGGCCCTCATGTGAGCTGTGCCCT...CTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp GCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAGCGCTTCGCTGCCAGTaGCGACATCGTTCGGGTTCT +
Preference number: 4 (lower is better)
Translates to: AGENPGQPFLLPRWESQEALRCQ*RHRSGS
Trigger: AGAACCCGAACGATGTCGTCACTGGCAGCGAAGCGC...TTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403222.7
ENST00000407373.5
ENST00000438716.3
CDS-3UTR GCA 90 bp GGCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCTGGAGTGCAGCGCCGTaGTTGGCGATGAGGTCATTG +
Preference number: 4 (lower is better)
Translates to: GQGLLPSNPHGGYHQYPLWSAAP*LAMRSL
Trigger: CAATGACCTCATCGCCAAGCACGGCGCTGCACTCCA...GAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000437268.6
CDS-3UTR GCA 90 bp GGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAACTGCTCATACTGCAGTaGCCGCTGCCATTTCCGACT +
Preference number: 4 (lower is better)
Translates to: GAGENPGQPFLLPRWESQLLILQ*PLPFPT
Trigger: AGTCGGAAATGGCAGCGGGCACTGCAGTATGAGCAG...TTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp CAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAATGCACGCGCTGCTCCTaGTCATACTGCAGTGCCCGC +
Preference number: 4 (lower is better)
Translates to: QVSPSSFQGGSPKKVWGECTRCS*SYCSAR
Trigger: GCGGGCACTGCAGTATGAGCAGGAGCAGCGCGTGCA...TTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp CTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAATGCACGCGCTGCTCCTaGTCATACTGCAGTGCCCGC +
Preference number: 4 (lower is better)
Translates to: LERTQVSPSSFQGGSPKKCTRCS*SYCSAR
Trigger: GCGGGCACTGCAGTATGAGCAGGAGCAGCGCGTGCA...TTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAATCCAAGTGCACGCGCTaGTCCTGCTCATACTGCAGT +
Preference number: 4 (lower is better)
Translates to: GAGENPGQPFLLPRWESQSKCTR*SCSYCS
Trigger: ACTGCAGTATGAGCAGGAGCAGCGCGTGCACTTGGA...TTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp TCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGAGCTCCCGCTCGAGGCTGTTGTaGTGCTTCGCCAGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: STWGLPSVPPPASVDGSSRSRLL*CFASCS
Trigger: TGAGCAGCTGGCGAAGCAGCACAACAGCCTCGAGCG...GGAGCTCCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp AGGAGGGATGCAAGGTCTCTGGTGCCCAGGTCACCAGCCCAGGCTGGGCCAAGGTACCTTCAGCTTTTCTaGTGTCTTCCTTGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: RRDARSLVPRSPAQAGPRYLQLF*CLPWPR
Trigger: CCGAGGCCAAGGAAGACAGCAGAAAAGCTGAAGGTA...CCTTGGCCCAGCCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCATCCCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332585.11
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
CDS-3UTR GCA 90 bp GGGCCAAGGGTTTGTTCATTATTGCTGATTTGGGGCCTGGGTCTCAGGGCGGGGGCTGGTGCAGTGCACTaGCTTGTCCAGCAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: GPRVCSLLLIWGLGLRAGAGAVH*LVQQVV
Trigger: CACCACCTGCTGGACAAGGCAGTGCACTGCACCAGC...CCCCGCCCTGAGACCCAGGCCCCAAATCAGCAATAATGAACAAACCCTTGGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp CCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGACTGAGCTGGTGCAGTaGACTGCCTTGTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: PRSALPPSKVGVPRKCGETELVQ*TALSSR
Trigger: CCTGCTGGACAAGGCAGTGCACTGCACCAGCTCAGT...CTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GGCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCGCTCCACTGAGCTGGTaGAGTGCACTGCCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: GQGLLPSNPHGGYHQYPLAPLSW*SALPCP
Trigger: TGGACAAGGCAGTGCACTGCACCAGCTCAGTGGAGC...GAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp CCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGGGTGGTGGCTCACCTaGTCACAGAGGGAGCGCAGG +
Preference number: 4 (lower is better)
Translates to: PQIHMGVTISTPSCICGWGWWLT*SQRERR
Trigger: CCTGCGCTCCCTCTGTGAGCAGGTGAGCCACCACCC...CCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp CTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGGGGTGGTGGCTCACCTaGTCACAGAGGGAGCGCAGG +
Preference number: 4 (lower is better)
Translates to: LKSTWGLPSVPPPASVDGGWWLT*SQRERR
Trigger: CCTGCGCTCCCTCTGTGAGCAGGTGAGCCACCACCC...CCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GGGATGCAAGGTCTCTGGTGCCCAGGTCACCAGCCCAGGCTGGGCCAAGGGTTTTGTCACCTTCCGGGCTaGCTCTTTGGAGAAGTAGCT +
Preference number: 4 (lower is better)
Translates to: GMQGLWCPGHQPRLGQGFCHLPG*LFGEVA
Trigger: AGCTACTTCTCCAAAGAGGCAGCCCGGAAGGTGACA...AAACCCTTGGCCCAGCCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCATCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000535268.5
CDS-3UTR GCA 90 bp TGGGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCCACATATGCCAGTCTTaGTTCTCCTTGGCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: WGLERTQVSPSSFQGGSPHICQS*FSLASQ
Trigger: CTGGGAGGCCAAGGAGAAGCAAGACTGGCATATGTG...GGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp AGTTCCTCCCTGGGTTGGGGGCTGGTGATTTGCGCAGCCCATGGCCCGGGCCAGATGTTGGGGCACATATaGCAGTCTTGCTTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: SSSLGWGLVICAAHGPGQMLGHI*QSCFSL
Trigger: CAAGGAGAAGCAAGACTGGCATATGTGCCCCAACAT...CTGGCCCGGGCCATGGGCTGCGCAAATCACCAGCCCCCAACCCAGGGAGGAACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGGCGCCTGTATTTGTTaGAAGGGTGGCGCTCAGAAG +
Preference number: 4 (lower is better)
Translates to: GAGENPGQPFLLPRWESQGACIC*KGGAQK
Trigger: CTTCTGAGCGCCACCCTTGCAACAAATACAGGCGCC...TTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp CCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAGGTGGGCCAGGCTGTaGAGGCGCCTGTATTTGTTG +
Preference number: 4 (lower is better)
Translates to: PRSALPPSKVGVPRKCGERWARL*RRLYLL
Trigger: CAACAAATACAGGCGCCTGCACAGCCTGGCCCACCT...CTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp CAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAAGAAACTCTGTGCTCTaGTGGGCTGGGGCAGCCCCC +
Preference number: 4 (lower is better)
Translates to: QVSPSSFQGGSPKKVWGERNSVL*WAGAAP
Trigger: GGGGGCTGCCCCAGCCCAGCAGAGCACAGAGTTTCT...TTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp CCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAGAGGCCAGGGACTGCTaGCCTCAAATCCACATGGGG +
Preference number: 4 (lower is better)
Translates to: PGQPFLLPRWESQESVGREARDC*PQIHMG
Trigger: CCCCATGTGGATTTGAGGGCAGCAGTCCCTGGCCTC...TCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp CAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAATCCCAGGGTCTCCTCTaGTGCTGCCGGCCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: QVSPSSFQGGSPKKVWGESQGLL*CCRPSP
Trigger: TGGAGAAGGCCGGCAGCAGCAGAGGAGACCCTGGGA...TTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431368.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCGTTCCAAGAAGTCCCTaGAGGCCTGGTGTCCATCCC +
Preference number: 4 (lower is better)
Translates to: ARDCCPQIHMGVTISTPSVPRSP*RPGVHP
Trigger: GGGATGGACACCAGGCCTGCAGGGACTTCTTGGAAC...GGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000431368.5
ENST00000535268.5
CDS-3UTR GCA 90 bp TGGGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCTTCAAGCGATTCTCCTaGCTTGGCCTCCCTAGTAGC +
Preference number: 4 (lower is better)
Translates to: WGLERTQVSPSSFQGGSPFKRFS*LGLPSS
Trigger: GCTACTAGGGAGGCCAAGGCAGGAGAATCGCTTGAA...GGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438716.3
CDS-3UTR CCA 90 bp TGGGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAGATTCTTCAGGGTGTaGTGCAGCTCGCTCTTGTCG +
Preference number: 4 (lower is better)
Translates to: WGLERTQVSPSSFQGGSPRFFRV*CSSLLS
Trigger: CGACAAGAGCGAGCTGCACCACACCCTGAAGAATCT...GGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000437268.6
ENST00000438716.3
CDS-3UTR CCA 90 bp CTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAATCTGTCAGGGAGCGCTaGAGTGCAGCGCCGTGCTTG +
Preference number: 4 (lower is better)
Translates to: LERTQVSPSSFQGGSPKKSVRER*SAAPCL
Trigger: CAAGCACGGCGCTGCACTCCAGCGCTCCCTGACAGA...TTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000437268.6
ENST00000438716.3
CDS-3UTR CCA 90 bp GGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAACTTTGGATGAACCCTTaGGCACGAGCGAGGCACCAT +
Preference number: 4 (lower is better)
Translates to: GAGENPGQPFLLPRWESQLWMNP*ARARHH
Trigger: ATGGTGCCTCGCTCGTGCCCAAGGGTTCATCCAAAG...TTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAATGCGGTGCACTGTGGTaGAGTAGGAGGACACAGAGA +
Preference number: 4 (lower is better)
Translates to: GAGENPGQPFLLPRWESQCGALW*SRRTQR
Trigger: TCTCTGTGTCCTCCTACTCCACCACAGTGCACCGCA...TTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGGATGCAAGGTCTCTGGTGCCCAGGTCACCAGCCCAGGCTGGGCCAAGGGTTTGCCTGGAATTCTAAGTaGATGGCACCTAGCGGCATG +
Preference number: 4 (lower is better)
Translates to: GMQGLWCPGHQPRLGQGFAWNSK*MAPSGM
Trigger: CATGCCGCTAGGTGCCATCCACTTAGAATTCCAGGC...AAACCCTTGGCCCAGCCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCATCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGTTCCGGTAGGGCCCAGGTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCCGTAGTGATTCCCACTaGCCTGGAATTCTAAGTGGA +
Preference number: 4 (lower is better)
Translates to: GSGRAQVHNEGARVTRRTRSDSH*PGILSG
Trigger: TCCACTTAGAATTCCAGGCCAGTGGGAATCACTACG...GGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGACCTGGGCCCTACCGGAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GCTTCTCCTTGGCCTCCCAGTAGCCGCCCTTGTACACACAGGCCATCTCCCCGGGGCAGGAACTTCAGCTaGCACCGGTCATTGGTCTTA +
Preference number: 4 (lower is better)
Translates to: ASPWPPSSRPCTHRPSPRGRNFS*HRSLVL
Trigger: TAAGACCAATGACCGGTGCCAGCTGAAGTTCCTGCC...CCGGGGAGATGGCCTGTGTGTACAAGGGCGGCTACTGGGAGGCCAAGGAGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452656.5
CDS-3UTR CCA 90 bp TGGGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCGGCAGGAACTTCAGCTaGCACCGGTCATTGGTCTTA +
Preference number: 4 (lower is better)
Translates to: WGLERTQVSPSSFQGGSPGRNFS*HRSLVL
Trigger: TAAGACCAATGACCGGTGCCAGCTGAAGTTCCTGCC...GGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAATCCGGGCTGCCTCTTTaGAGAAGTAGCTGTAGGGCA +
Preference number: 4 (lower is better)
Translates to: GAGENPGQPFLLPRWESQSGLPL*RSSCRA
Trigger: TGCCCTACAGCTACTTCTCCAAAGAGGCAGCCCGGA...TTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAGCTTCCCGTCAGAGCTaGGGCTGCTGGGACTGCTAT +
Preference number: 4 (lower is better)
Translates to: PGQPFLLPRWESQESVGRASRQS*GCWDCY
Trigger: ATAGCAGTCCCAGCAGCCCCAGCTCTGACGGGAAGC...TCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000535268.5
CDS-3UTR CCA 90 bp GTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCTGGGGGCTGGAGAGAACCTTGGCTGACAGGGTCTaGTACACTGTCTTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: VHNEGARVTRRTWGLERTLADRV*YTVFCF
Trigger: GAAGCAGAAGACAGTGTACCAGACCCTGTCAGCCAA...GGTTCTCTCCAGCCCCCAGGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000535268.5
CDS-3UTR CCA 90 bp CCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAGCTGCTTCTCGGTATTaGCCTCGTCCCAACGGCCCT +
Preference number: 4 (lower is better)
Translates to: PGQPFLLPRWESQESVGRAASRY*PRPNGP
Trigger: AGGGCCGTTGGGACGAGGCCAATACCGAGAAGCAGC...TCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGGCCAAGGGTTTGTTCATTATTGCTGATTTGGGGCCTGGGTCTCAGGGCGGGGGCTGCTTCTCGGTATTaGCCTCGTCCCAACGGCCCT +
Preference number: 4 (lower is better)
Translates to: GPRVCSLLLIWGLGLRAGAASRY*PRPNGP
Trigger: AGGGCCGTTGGGACGAGGCCAATACCGAGAAGCAGC...CCCCGCCCTGAGACCCAGGCCCCAAATCAGCAATAATGAACAAACCCTTGGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAGTCTTGCTTCTCCTTaGCCTCCCAGTAGCCGCCCT +
Preference number: 4 (lower is better)
Translates to: PRSALPPSKVGVPRKCGESLASP*PPSSRP
Trigger: AGGGCGGCTACTGGGAGGCCAAGGAGAAGCAAGACT...CTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCAGTCTTGCTTCTCCTTaGCCTCCCAGTAGCCGCCCT +
Preference number: 4 (lower is better)
Translates to: ARDCCPQIHMGVTISTPSSLASP*PPSSRP
Trigger: AGGGCGGCTACTGGGAGGCCAAGGAGAAGCAAGACT...GGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp AGTTCCTCCCTGGGTTGGGGGCTGGTGATTTGCGCAGCCCATGGCCCGGGCCAGTATTTGTTGCAAGGGTaGCGCTCAGAAGATGTTGGG +
Preference number: 4 (lower is better)
Translates to: SSSLGWGLVICAAHGPGQYLLQG*RSEDVG
Trigger: CCCAACATCTTCTGAGCGCCACCCTTGCAACAAATA...CTGGCCCGGGCCATGGGCTGCGCAAATCACCAGCCCCCAACCCAGGGAGGAACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGGCATTAATGAACAGGTaGGCCAGGCTGTGCAGGCGC +
Preference number: 4 (lower is better)
Translates to: PRSALPPSKVGVPRKCGEALMNR*ARLCRR
Trigger: GCGCCTGCACAGCCTGGCCCACCTGTTCATTAATGC...CTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp TGGGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCGGAAATAGGAAGGGCTaGGAATGGGCTGGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: WGLERTQVSPSSFQGGSPGNRKG*EWAGRK
Trigger: CTTTCTCCCAGCCCATTCCCAGCCCTTCCTATTTCC...GGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCAGTTCCTCCCTGGGTTaGGGGCTGGTGATTTGCGCA +
Preference number: 4 (lower is better)
Translates to: ARDCCPQIHMGVTISTPSSSSLG*GLVICA
Trigger: TGCGCAAATCACCAGCCCCCAACCCAGGGAGGAACT...GGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCAGTTCCTCCCTGGGTTaGGGGCTGGTGATTTGCGCA +
Preference number: 4 (lower is better)
Translates to: GQGLLPSNPHGGYHQYPLSSSLG*GLVICA
Trigger: TGCGCAAATCACCAGCCCCCAACCCAGGGAGGAACT...GAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGGCCAAGGGTTTGTTCATTATTGCTGATTTGGGGCCTGGGTCTCAGGGCGGGGTGTGCTCTGCTGGGCTaGGGCAGCCCCCTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: GPRVCSLLLIWGLGLRAGCALLG*GSPLLF
Trigger: AAACAGAAGGGGGCTGCCCCAGCCCAGCAGAGCACA...CCCCGCCCTGAGACCCAGGCCCCAAATCAGCAATAATGAACAAACCCTTGGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAGGGATTCTGAGGGGCTaGGTCAGTGGCCATGGTGGT +
Preference number: 4 (lower is better)
Translates to: AGENPGQPFLLPRWESQEGILRG*VSGHGG
Trigger: ACCACCATGGCCACTGACCCAGCCCCTCAGAATCCC...TTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGGCCAGCCGGCCTGAGTTGTGGTAACTGGGGCAGGGGTTCCGGTAGGGCCCAGAGAGGATTTTCATTTTaGAGCAATAGGGTGGCAGGC +
Preference number: 4 (lower is better)
Translates to: GPAGLSCGNWGRGSGRAQRGFSF*SNRVAG
Trigger: GCCTGCCACCCTATTGCTCCAAAATGAAAATCCTCT...CTGGGCCCTACCGGAACCCCTGCCCCAGTTACCACAACTCAGGCCGGCTGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000401475.5
3UTR CAA 72 bp GGTGCCCAGGTCACCAGCCCAGGCTGGGCCAAGGGTTaGTTCATTATTGCTGATTTGGGGCCTGGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: GAQVTSPGWAKG*FIIADLGPGSQ
Trigger: CTGAGACCCAGGCCCCAAATCAGCAATAATGAACAAACCCTTGGCCCAGCCTGGGCTGGTGACCTGGGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp TGGGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCCCAGAGTCATCTGAATaGGTGTTCATCACGCGGACA +
Preference number: 4 (lower is better)
Translates to: WGLERTQVSPSSFQGGSPPESSE*VFITRT
Trigger: TGTCCGCGTGATGAACACTCATTCAGATGACTCTGG...GGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000438716.3
CDS-3UTR TCA 90 bp GGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGTCCCCAGAGTCATCTaGATGAGTGTTCATCACGCG +
Preference number: 4 (lower is better)
Translates to: GAGENPGQPFLLPRWESQVPRVI*MSVHHA
Trigger: CGCGTGATGAACACTCATTCAGATGACTCTGGGGAC...TTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000438716.3
CDS-3UTR TCA 90 bp GGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGGTCATTGCACGTGCTaGGGTCATCTAACTTCAGGG +
Preference number: 4 (lower is better)
Translates to: GAGENPGQPFLLPRWESQGHCTC*GHLTSG
Trigger: CCCTGAAGTTAGATGACCTCAGCACGTGCAATGACC...TTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000437268.6
ENST00000438716.3
CDS-3UTR TCA 90 bp CCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGCCTCTTGACTTTGGATaGACCCTTGGGCACGAGCGA +
Preference number: 4 (lower is better)
Translates to: PRSALPPSKVGVPRKCGEPLDFG*TLGHER
Trigger: TCGCTCGTGCCCAAGGGTTCATCCAAAGTCAAGAGG...CTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp TCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGAGCTCCTGGACAGGGGCTCATTaGAGTTCACCGGCATGGGGA +
Preference number: 4 (lower is better)
Translates to: STWGLPSVPPPASVDGSSWTGAH*SSPAWG
Trigger: TCCCCATGCCGGTGAACTTCAATGAGCCCCTGTCCA...GGAGCTCCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp TGGGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCGATGTTGTGAACAGTTaGGGTGCTCTTCCTCCACAC +
Preference number: 4 (lower is better)
Translates to: WGLERTQVSPSSFQGGSPDVVNS*GALPPH
Trigger: GTGTGGAGGAAGAGCACCTCAACTGTTCACAACATC...GGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp GGGATGCAAGGTCTCTGGTGCCCAGGTCACCAGCCCAGGCTGGGCCAAGGGTTTTGGGACTGCTATGCATaGCCTTGGAGCACTCCATTT +
Preference number: 4 (lower is better)
Translates to: GMQGLWCPGHQPRLGQGFWDCYA*PWSTPF
Trigger: AAATGGAGTGCTCCAAGGTCATGCATAGCAGTCCCA...AAACCCTTGGCCCAGCCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCATCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000535268.5
CDS-3UTR TCA 90 bp TCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGAGCTCCCCACAGCAGCTTGGCTaGCAGGGTCTGGTACACTGT +
Preference number: 4 (lower is better)
Translates to: STWGLPSVPPPASVDGSSPQQLG*QGLVHC
Trigger: ACAGTGTACCAGACCCTGTCAGCCAAGCTGCTGTGG...GGAGCTCCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000535268.5
CDS-3UTR TCA 90 bp CCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGACCACAGCAGCTTGGCTaGCAGGGTCTGGTACACTGT +
Preference number: 4 (lower is better)
Translates to: PGQPFLLPRWESQESVGRPQQLG*QGLVHC
Trigger: ACAGTGTACCAGACCCTGTCAGCCAAGCTGCTGTGG...TCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000535268.5
CDS-3UTR TCA 90 bp GGGCCAAGGGTTTGTTCATTATTGCTGATTTGGGGCCTGGGTCTCAGGGCGGGGAGGGCACAGCTCACATaGGGGCCAAACTCAGACAGG +
Preference number: 4 (lower is better)
Translates to: GPRVCSLLLIWGLGLRAGRAQLT*GPNSDR
Trigger: CCTGTCTGAGTTTGGCCCTCATGTGAGCTGTGCCCT...CCCCGCCCTGAGACCCAGGCCCCAAATCAGCAATAATGAACAAACCCTTGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp CTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGGCGGTGATCCACTGCTaGCGGTCCACCTCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: LKSTWGLPSVPPPASVDGAVIHC*RSTSEL
Trigger: CAGCTCAGAGGTGGACCGGCAGCAGTGGATCACCGC...CCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
CDS-3UTR GCA 90 bp CTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGAGGGCGGTGATCCACTaGTGCCGGTCCACCTCTGAG +
Preference number: 4 (lower is better)
Translates to: LKSTWGLPSVPPPASVDGRAVIH*CRSTSE
Trigger: CTCAGAGGTGGACCGGCAGCAGTGGATCACCGCCCT...CCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
CDS-3UTR GCA 90 bp GGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAAAAGGGCGGTGATCCACTaGTGCCGGTCCACCTCTGAG +
Preference number: 4 (lower is better)
Translates to: GQPFLLPRWESQESVGRKRAVIH*CRSTSE
Trigger: CTCAGAGGTGGACCGGCAGCAGTGGATCACCGCCCT...TTTTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000438716.3
CDS-3UTR GCA 90 bp CCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGTTCTTCAGGGTGTGGTaGAGCTCGCTCTTGTCGGCT +
Preference number: 4 (lower is better)
Translates to: PRSALPPSKVGVPRKCGEFFRVW*SSLLSA
Trigger: AGCCGACAAGAGCGAGCTGCACCACACCCTGAAGAA...CTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000437268.6
ENST00000438716.3
CDS-3UTR GCA 90 bp GCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTTCTTCAGGGTGTGGTaGAGCTCGCTCTTGTCGGCT +
Preference number: 4 (lower is better)
Translates to: ARDCCPQIHMGVTISTPSFFRVW*SSLLSA
Trigger: AGCCGACAAGAGCGAGCTGCACCACACCCTGAAGAA...GGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000437268.6
CDS-3UTR GCA 90 bp CCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGTGCTCCTGCTCATACTaGAGTGCCCGCTGCCATTTC +
Preference number: 4 (lower is better)
Translates to: PRSALPPSKVGVPRKCGECSCSY*SARCHF
Trigger: GAAATGGCAGCGGGCACTGCAGTATGAGCAGGAGCA...CTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp CCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGTGCACGCGCTGCTCCTaGTCATACTGCAGTGCCCGC +
Preference number: 4 (lower is better)
Translates to: PQIHMGVTISTPSCICGWCTRCS*SYCSAR
Trigger: GCGGGCACTGCAGTATGAGCAGGAGCAGCGCGTGCA...CCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp CTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGTGCACGCGCTGCTCCTaGTCATACTGCAGTGCCCGC +
Preference number: 4 (lower is better)
Translates to: LKSTWGLPSVPPPASVDGCTRCS*SYCSAR
Trigger: GCGGGCACTGCAGTATGAGCAGGAGCAGCGCGTGCA...CCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp TGGGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCTACCTTCAGCTTTTCTaGTGTCTTCCTTGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: WGLERTQVSPSSFQGGSPYLQLF*CLPWPR
Trigger: CCGAGGCCAAGGAAGACAGCAGAAAAGCTGAAGGTA...GGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000332585.11
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
CDS-3UTR GCA 90 bp CTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGCTGGTGCAGTGCACTaGCTTGTCCAGCAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: LERTQVSPSSFQGGSPKKAGAVH*LVQQVV
Trigger: CACCACCTGCTGGACAAGGCAGTGCACTGCACCAGC...TTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp CAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAGCTGGTGCAGTGCACTaGCTTGTCCAGCAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: QVSPSSFQGGSPKKVWGEAGAVH*LVQQVV
Trigger: CACCACCTGCTGGACAAGGCAGTGCACTGCACCAGC...TTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp AGGCTGTGCAGGCGCCTGTATTTGTTGCAAGGGTGGCGCTCAGAAGATGTTGGGGCTGGTGCAGTGCACTaGCTTGTCCAGCAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: RLCRRLYLLQGWRSEDVGAGAVH*LVQQVV
Trigger: CACCACCTGCTGGACAAGGCAGTGCACTGCACCAGC...CCCAACATCTTCTGAGCGCCACCCTTGCAACAAATACAGGCGCCTGCACAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452656.5
CDS-3UTR GCA 90 bp TCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGAGCTCCACTGAGCTGGTGCAGTaGACTGCCTTGTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: STWGLPSVPPPASVDGSSTELVQ*TALSSR
Trigger: CCTGCTGGACAAGGCAGTGCACTGCACCAGCTCAGT...GGAGCTCCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GGGCCAAGGGTTTGTTCATTATTGCTGATTTGGGGCCTGGGTCTCAGGGCGGGGACTGAGCTGGTGCAGTaGACTGCCTTGTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: GPRVCSLLLIWGLGLRAGTELVQ*TALSSR
Trigger: CCTGCTGGACAAGGCAGTGCACTGCACCAGCTCAGT...CCCCGCCCTGAGACCCAGGCCCCAAATCAGCAATAATGAACAAACCCTTGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAGCTCCACTGAGCTGGTaGAGTGCACTGCCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: AGENPGQPFLLPRWESQEAPLSW*SALPCP
Trigger: TGGACAAGGCAGTGCACTGCACCAGCTCAGTGGAGC...TTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GGGCCAAGGGTTTGTTCATTATTGCTGATTTGGGGCCTGGGTCTCAGGGCGGGGGCTCCACTGAGCTGGTaGAGTGCACTGCCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: GPRVCSLLLIWGLGLRAGAPLSW*SALPCP
Trigger: TGGACAAGGCAGTGCACTGCACCAGCTCAGTGGAGC...CCCCGCCCTGAGACCCAGGCCCCAAATCAGCAATAATGAACAAACCCTTGGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp CCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAGCTCCACTGAGCTGGTaGAGTGCACTGCCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: PGQPFLLPRWESQESVGRAPLSW*SALPCP
Trigger: TGGACAAGGCAGTGCACTGCACCAGCTCAGTGGAGC...TCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp CTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGCCACCAGGCACATCTaGTCCACTGAGCTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: LERTQVSPSSFQGGSPKKATRHI*STELVQ
Trigger: CTGCACCAGCTCAGTGGAGCAGATGTGCCTGGTGGC...TTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp AGGAGGGATGCAAGGTCTCTGGTGCCCAGGTCACCAGCCCAGGCTGGGCCAAGGTGTGAACAGTTGAGGTaGTCTTCCTCCACACGTAGT +
Preference number: 4 (lower is better)
Translates to: RRDARSLVPRSPAQAGPRCEQLR*SSSTRS
Trigger: ACTACGTGTGGAGGAAGAGCACCTCAACTGTTCACA...CCTTGGCCCAGCCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCATCCCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCTGGGGGCTGGAGAGAACCTGTGAACAGTTGAGGTaGTCTTCCTCCACACGTAGT +
Preference number: 4 (lower is better)
Translates to: VHNEGARVTRRTWGLERTCEQLR*SSSTRS
Trigger: ACTACGTGTGGAGGAAGAGCACCTCAACTGTTCACA...GGTTCTCTCCAGCCCCCAGGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp CAGGTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCTGGGGGCTGGAGAGATGTGAACAGTTGAGGTaGTCTTCCTCCACACGTAGT +
Preference number: 4 (lower is better)
Translates to: QVHNEGARVTRRTWGLERCEQLR*SSSTRS
Trigger: ACTACGTGTGGAGGAAGAGCACCTCAACTGTTCACA...TCTCTCCAGCCCCCAGGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGACCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GGCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGCTGGGACTGCTATaGATGACCTTGGAGCACTCC +
Preference number: 4 (lower is better)
Translates to: GQGLLPSNPHGGYHQYPLLLGLL*MTLEHS
Trigger: GGAGTGCTCCAAGGTCATGCATAGCAGTCCCAGCAG...GAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000535268.5
CDS-3UTR GCA 90 bp GCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCCTGCTGGGACTGCTATaGATGACCTTGGAGCACTCC +
Preference number: 4 (lower is better)
Translates to: ARDCCPQIHMGVTISTPSLLGLL*MTLEHS
Trigger: GGAGTGCTCCAAGGTCATGCATAGCAGTCCCAGCAG...GGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000535268.5
CDS-3UTR GCA 90 bp TCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGAGCTCCTTCTCCTCCAGCCGCTaGTTCTCGGTATTGGCCTCG +
Preference number: 4 (lower is better)
Translates to: STWGLPSVPPPASVDGSSFSSSR*FSVLAS
Trigger: CGAGGCCAATACCGAGAAGCAGCGGCTGGAGGAGAA...GGAGCTCCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAATTCTCCTCCAGCCGCTaGTTCTCGGTATTGGCCTCG +
Preference number: 4 (lower is better)
Translates to: AGENPGQPFLLPRWESQEFSSSR*FSVLAS
Trigger: CGAGGCCAATACCGAGAAGCAGCGGCTGGAGGAGAA...TTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp CCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGATTCTCCTCCAGCCGCTaGTTCTCGGTATTGGCCTCG +
Preference number: 4 (lower is better)
Translates to: PGQPFLLPRWESQESVGRFSSSR*FSVLAS
Trigger: CGAGGCCAATACCGAGAAGCAGCGGCTGGAGGAGAA...TCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp CCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGGGCGCCTGTATTTGTTaGAAGGGTGGCGCTCAGAAG +
Preference number: 4 (lower is better)
Translates to: PRSALPPSKVGVPRKCGEGACIC*KGGAQK
Trigger: CTTCTGAGCGCCACCCTTGCAACAAATACAGGCGCC...CTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GGCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCGGCGCCTGTATTTGTTaGAAGGGTGGCGCTCAGAAG +
Preference number: 4 (lower is better)
Translates to: GQGLLPSNPHGGYHQYPLGACIC*KGGAQK
Trigger: CTTCTGAGCGCCACCCTTGCAACAAATACAGGCGCC...GAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GGCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCATCAGTACCCCCTCCTaGATCTGTGGATGGGAGCTC +
Preference number: 4 (lower is better)
Translates to: GQGLLPSNPHGGYHQYPLISTPS*ICGWEL
Trigger: GAGCTCCCATCCACAGATGCAGGAGGGGGTACTGAT...GAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp CAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAGAGGCCAGGGACTGCTaGCCTCAAATCCACATGGGG +
Preference number: 4 (lower is better)
Translates to: QVSPSSFQGGSPKKVWGEEARDC*PQIHMG
Trigger: CCCCATGTGGATTTGAGGGCAGCAGTCCCTGGCCTC...TTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp CTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAATGCAAGGTCTCTGGTaGCCAGGTCACCAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: LERTQVSPSSFQGGSPKKMQGLW*PGHQPR
Trigger: CCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCAT...TTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAGTTCCAAGAAGTCCCTaGAGGCCTGGTGTCCATCCC +
Preference number: 4 (lower is better)
Translates to: AGENPGQPFLLPRWESQEVPRSP*RPGVHP
Trigger: GGGATGGACACCAGGCCTGCAGGGACTTCTTGGAAC...TTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431368.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCAGCTCCTGGCCCCACTaGTCAGCAAGATACCACAAG +
Preference number: 4 (lower is better)
Translates to: ARDCCPQIHMGVTISTPSSSWPH*SARYHK
Trigger: CTTGTGGTATCTTGCTGACCAGTGGGGCCAGGAGCT...GGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
CDS-3UTR CCA 90 bp GGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAAGATTCTTCAGGGTGTaGTGCAGCTCGCTCTTGTCG +
Preference number: 4 (lower is better)
Translates to: GAGENPGQPFLLPRWESQRFFRV*CSSLLS
Trigger: CGACAAGAGCGAGCTGCACCACACCCTGAAGAATCT...TTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000437268.6
ENST00000438716.3
CDS-3UTR CCA 90 bp GCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCCTTTGGATGAACCCTTaGGCACGAGCGAGGCACCAT +
Preference number: 4 (lower is better)
Translates to: ARDCCPQIHMGVTISTPSLWMNP*ARARHH
Trigger: ATGGTGCCTCGCTCGTGCCCAAGGGTTCATCCAAAG...GGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCTGCGGTGCACTGTGGTaGAGTAGGAGGACACAGAGA +
Preference number: 4 (lower is better)
Translates to: GQGLLPSNPHGGYHQYPLCGALW*SRRTQR
Trigger: TCTCTGTGTCCTCCTACTCCACCACAGTGCACCGCA...GAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp TCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGAGCTCCGGCTCCAGCCATGCTTaGAGAACACGTAGTGCGCAG +
Preference number: 4 (lower is better)
Translates to: STWGLPSVPPPASVDGSSGSSHA*RTRSAQ
Trigger: CTGCGCACTACGTGTTCTCCAAGCATGGCTGGAGCC...GGAGCTCCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCTGGGGGCTGGAGAGAACCCGTAGTGATTCCCACTaGCCTGGAATTCTAAGTGGA +
Preference number: 4 (lower is better)
Translates to: VHNEGARVTRRTWGLERTRSDSH*PGILSG
Trigger: TCCACTTAGAATTCCAGGCCAGTGGGAATCACTACG...GGTTCTCTCCAGCCCCCAGGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CAGGTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCTGGGGGCTGGAGAGACGTAGTGATTCCCACTaGCCTGGAATTCTAAGTGGA +
Preference number: 4 (lower is better)
Translates to: QVHNEGARVTRRTWGLERRSDSH*PGILSG
Trigger: TCCACTTAGAATTCCAGGCCAGTGGGAATCACTACG...TCTCTCCAGCCCCCAGGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGACCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGATCGATGTCCCCTGACTaGTCGATCCAGAGCTTGCCC +
Preference number: 4 (lower is better)
Translates to: PGQPFLLPRWESQESVGRSMSPD*SIQSLP
Trigger: GGGCAAGCTCTGGATCGACCAGTCAGGGGACATCGA...TCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAATCGATGTCCCCTGACTaGTCGATCCAGAGCTTGCCC +
Preference number: 4 (lower is better)
Translates to: AGENPGQPFLLPRWESQESMSPD*SIQSLP
Trigger: GGGCAAGCTCTGGATCGACCAGTCAGGGGACATCGA...TTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp AGGAGGGATGCAAGGTCTCTGGTGCCCAGGTCACCAGCCCAGGCTGGGCCAAGGGCTGGCACCGGTCATTaGTCTTATGGTTCACAATCT +
Preference number: 4 (lower is better)
Translates to: RRDARSLVPRSPAQAGPRAGTGH*SYGSQS
Trigger: AGATTGTGAACCATAAGACCAATGACCGGTGCCAGC...CCTTGGCCCAGCCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCATCCCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGGCAGGAACTTCAGCTaGCACCGGTCATTGGTCTTA +
Preference number: 4 (lower is better)
Translates to: GAGENPGQPFLLPRWESQGRNFS*HRSLVL
Trigger: TAAGACCAATGACCGGTGCCAGCTGAAGTTCCTGCC...TTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAGCTTCCCGTCAGAGCTaGGGCTGCTGGGACTGCTAT +
Preference number: 4 (lower is better)
Translates to: QVSPSSFQGGSPKKVWGEASRQS*GCWDCY
Trigger: ATAGCAGTCCCAGCAGCCCCAGCTCTGACGGGAAGC...TTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000535268.5
CDS-3UTR CCA 90 bp TGGGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCTTGGCTGACAGGGTCTaGTACACTGTCTTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: WGLERTQVSPSSFQGGSPLADRV*YTVFCF
Trigger: GAAGCAGAAGACAGTGTACCAGACCCTGTCAGCCAA...GGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000535268.5
CDS-3UTR CCA 90 bp CTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGCTGCTTCTCGGTATTaGCCTCGTCCCAACGGCCCT +
Preference number: 4 (lower is better)
Translates to: LERTQVSPSSFQGGSPKKAASRY*PRPNGP
Trigger: AGGGCCGTTGGGACGAGGCCAATACCGAGAAGCAGC...TTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGCTTCTCAAACCACAGTaGCGTGTAGGCATCCGCCTC +
Preference number: 4 (lower is better)
Translates to: PRSALPPSKVGVPRKCGELLKPQ*RVGIRL
Trigger: GAGGCGGATGCCTACACGCCACTGTGGTTTGAGAAG...CTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAGTCTTGCTTCTCCTTaGCCTCCCAGTAGCCGCCCT +
Preference number: 4 (lower is better)
Translates to: PGQPFLLPRWESQESVGRSLASP*PPSSRP
Trigger: AGGGCGGCTACTGGGAGGCCAAGGAGAAGCAAGACT...TCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp TCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGAGCTCCGCATTAATGAACAGGTaGGCCAGGCTGTGCAGGCGC +
Preference number: 4 (lower is better)
Translates to: STWGLPSVPPPASVDGSSALMNR*ARLCRR
Trigger: GCGCCTGCACAGCCTGGCCCACCTGTTCATTAATGC...GGAGCTCCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGGAAATAGGAAGGGCTaGGAATGGGCTGGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: GAGENPGQPFLLPRWESQGNRKG*EWAGRK
Trigger: CTTTCTCCCAGCCCATTCCCAGCCCTTCCTATTTCC...TTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAGTTCCTCCCTGGGTTaGGGGCTGGTGATTTGCGCA +
Preference number: 4 (lower is better)
Translates to: PGQPFLLPRWESQESVGRSSSLG*GLVICA
Trigger: TGCGCAAATCACCAGCCCCCAACCCAGGGAGGAACT...TCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCGTCACCAGCCCAGGCTaGGCCAAGGGTTTGTTCATT +
Preference number: 4 (lower is better)
Translates to: ARDCCPQIHMGVTISTPSVTSPG*AKGLFI
Trigger: AATGAACAAACCCTTGGCCCAGCCTGGGCTGGTGAC...GGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGGGATTCTGAGGGGCTaGGTCAGTGGCCATGGTGGT +
Preference number: 4 (lower is better)
Translates to: LERTQVSPSSFQGGSPKKGILRG*VSGHGG
Trigger: ACCACCATGGCCACTGACCCAGCCCCTCAGAATCCC...TTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGGCCAGCCGGCCTGAGTTGTGGTAACTGGGGCAGGGGTTCCGGTAGGGCCCAGCTAACAAAACAGTGTTaGGGAGAGGTACATTCCACA +
Preference number: 4 (lower is better)
Translates to: GPAGLSCGNWGRGSGRAQLTKQC*GEVHST
Trigger: TGTGGAATGTACCTCTCCCCAACACTGTTTTGTTAG...CTGGGCCCTACCGGAACCCCTGCCCCAGTTACCACAACTCAGGCCGGCTGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000437268.6
ENST00000535268.5
CDS-3UTR CCA 90 bp GGAAGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCAGGCCGCCAGAAGCGGTaGCCCCAAGTGGCCGCCTCA +
Preference number: 4 (lower is better)
Translates to: GRAGNGLGERPFSTKLSAGRQKR*PQVAAS
Trigger: TGAGGCGGCCACTTGGGGCCACCGCTTCTGGCGGCC...TGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403222.7
ENST00000407373.5
ENST00000438716.3
CDS-3UTR TCA 90 bp CCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGGTCCCCAGAGTCATCTaGATGAGTGTTCATCACGCG +
Preference number: 4 (lower is better)
Translates to: PRSALPPSKVGVPRKCGEVPRVI*MSVHHA
Trigger: CGCGTGATGAACACTCATTCAGATGACTCTGGGGAC...CTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000438716.3
CDS-3UTR TCA 90 bp CCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAGAGGCTTCCCTCAATaGAGCTCTTGGAGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: PGQPFLLPRWESQESVGRRGFPQ*SSWRGW
Trigger: CCAACCCCTCCAAGAGCTTCATTGAGGGAAGCCTCT...TCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp GCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAATGCGGACTCGCCTCTTaGCTTTGGATGAACCCTTGG +
Preference number: 4 (lower is better)
Translates to: AGENPGQPFLLPRWESQECGLAS*LWMNPW
Trigger: CCAAGGGTTCATCCAAAGTCAAGAGGCGAGTCCGCA...TTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp CTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAACTTGCTGGAGATGGTaGTCTCCTGCCAGAGGCTCC +
Preference number: 4 (lower is better)
Translates to: LERTQVSPSSFQGGSPKKTCWRW*SPARGS
Trigger: GGAGCCTCTGGCAGGAGATCACCATCTCCAGCAAGT...TTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp CAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAACTTGCTGGAGATGGTaGTCTCCTGCCAGAGGCTCC +
Preference number: 4 (lower is better)
Translates to: QVSPSSFQGGSPKKVWGETCWRW*SPARGS
Trigger: GGAGCCTCTGGCAGGAGATCACCATCTCCAGCAAGT...TTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp GGCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCAATCTCGATGTCCCCTaGCTGGTCGATCCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: GQGLLPSNPHGGYHQYPLNLDVP*LVDPEL
Trigger: AAGCTCTGGATCGACCAGTCAGGGGACATCGAGATT...GAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp TCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGAGCTCCTGGGCCATTTCACCCTaGTTTCTGTCTGTGGGTCGC +
Preference number: 4 (lower is better)
Translates to: STWGLPSVPPPASVDGSSWAISP*FLSVGR
Trigger: GCGACCCACAGACAGAAATCAGGGTGAAATGGCCCA...GGAGCTCCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000403222.7
ENST00000407373.5
CDS-3UTR TCA 90 bp CCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAGAGGTCACCCTCAATaGAGCTCTTGGAGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: PGQPFLLPRWESQESVGRRGHPQ*SSWRGW
Trigger: CCAACCCCTCCAAGAGCTTCATTGAGGGTGACCTCT...TCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403222.7
CDS-3UTR GCA 90 bp CCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGATTCTTCAGGGTGTGGTaGAGCTCGCTCTTGTCGGCT +
Preference number: 4 (lower is better)
Translates to: PGQPFLLPRWESQESVGRFFRVW*SSLLSA
Trigger: AGCCGACAAGAGCGAGCTGCACCACACCCTGAAGAA...TCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000437268.6
ENST00000438716.3
CDS-3UTR GCA 90 bp GGGCCAAGGGTTTGTTCATTATTGCTGATTTGGGGCCTGGGTCTCAGGGCGGGGTTCTTCAGGGTGTGGTaGAGCTCGCTCTTGTCGGCT +
Preference number: 4 (lower is better)
Translates to: GPRVCSLLLIWGLGLRAGFFRVW*SSLLSA
Trigger: AGCCGACAAGAGCGAGCTGCACCACACCCTGAAGAA...CCCCGCCCTGAGACCCAGGCCCCAAATCAGCAATAATGAACAAACCCTTGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000437268.6
CDS-3UTR GCA 90 bp GGCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCTACTGCAGTGCCCGCTaGCATTTCCGACTGTGTATC +
Preference number: 4 (lower is better)
Translates to: GQGLLPSNPHGGYHQYPLYCSAR*HFRLCI
Trigger: GATACACAGTCGGAAATGGCAGCGGGCACTGCAGTA...GAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAACTGCTCATACTGCAGTaGCCGCTGCCATTTCCGACT +
Preference number: 4 (lower is better)
Translates to: AGENPGQPFLLPRWESQELLILQ*PLPFPT
Trigger: AGTCGGAAATGGCAGCGGGCACTGCAGTATGAGCAG...TTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp CCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGACTGCTCATACTGCAGTaGCCGCTGCCATTTCCGACT +
Preference number: 4 (lower is better)
Translates to: PGQPFLLPRWESQESVGRLLILQ*PLPFPT
Trigger: AGTCGGAAATGGCAGCGGGCACTGCAGTATGAGCAG...TCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GGGCCAAGGGTTTGTTCATTATTGCTGATTTGGGGCCTGGGTCTCAGGGCGGGGTGCTCCTGCTCATACTaGAGTGCCCGCTGCCATTTC +
Preference number: 4 (lower is better)
Translates to: GPRVCSLLLIWGLGLRAGCSCSY*SARCHF
Trigger: GAAATGGCAGCGGGCACTGCAGTATGAGCAGGAGCA...CCCCGCCCTGAGACCCAGGCCCCAAATCAGCAATAATGAACAAACCCTTGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp CCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAATGGTTTCCTCCAAGTaGACGCGCTGCTCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: PGQPFLLPRWESQESVGRMVSSK*TRCSCS
Trigger: TGAGCAGGAGCAGCGCGTGCACTTGGAGGAAACCAT...TCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAATGGTTTCCTCCAAGTaGACGCGCTGCTCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: AGENPGQPFLLPRWESQEMVSSK*TRCSCS
Trigger: TGAGCAGGAGCAGCGCGTGCACTTGGAGGAAACCAT...TTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp CCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGATCGAGGCTGTTGTGCTaGTTCGCCAGCTGCTCAATG +
Preference number: 4 (lower is better)
Translates to: PGQPFLLPRWESQESVGRSRLLC*FASCSM
Trigger: CATTGAGCAGCTGGCGAAGCAGCACAACAGCCTCGA...TCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GGCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCGGAACTTGTCCCGGTaGTACCTTCAGCTTTTCTGC +
Preference number: 4 (lower is better)
Translates to: GQGLLPSNPHGGYHQYPLRNLSR*YLQLFC
Trigger: GCAGAAAAGCTGAAGGTAGCACCGGGACAAGTTCCG...GAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000332585.11
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
CDS-3UTR GCA 90 bp TGTGCAGGCGCCTGTATTTGTTGCAAGGGTGGCGCTCAGAAGATGTTGGGGCACGCTCCACTGAGCTGGTaGAGTGCACTGCCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: CAGACICCKGGAQKMLGHAPLSW*SALPCP
Trigger: TGGACAAGGCAGTGCACTGCACCAGCTCAGTGGAGC...GTGCCCCAACATCTTCTGAGCGCCACCCTTGCAACAAATACAGGCGCCTGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452656.5
CDS-3UTR GCA 90 bp CCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGTGTCACCTTCCGGGCTaGCTCTTTGGAGAAGTAGCT +
Preference number: 4 (lower is better)
Translates to: PRSALPPSKVGVPRKCGECHLPG*LFGEVA
Trigger: AGCTACTTCTCCAAAGAGGCAGCCCGGAAGGTGACA...CTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000535268.5
CDS-3UTR GCA 90 bp CAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAGCACGTAATGGGCCTTaGCCTGGCTGTCACTCACCA +
Preference number: 4 (lower is better)
Translates to: QVSPSSFQGGSPKKVWGEARNGP*PGCHSP
Trigger: TGGTGAGTGACAGCCAGGGCAAGGCCCATTACGTGC...TTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000535268.5
CDS-3UTR GCA 90 bp GGGCCAAGGGTTTGTTCATTATTGCTGATTTGGGGCCTGGGTCTCAGGGCGGGGTGGTACACTGTCTTCTaGTTCCCGTCAGAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: GPRVCSLLLIWGLGLRAGWYTVF*FPSELG
Trigger: CCCCAGCTCTGACGGGAAGCAGAAGACAGTGTACCA...CCCCGCCCTGAGACCCAGGCCCCAAATCAGCAATAATGAACAAACCCTTGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000535268.5
CDS-3UTR GCA 90 bp TCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGAGCTCCTGGTACACTGTCTTCTaGTTCCCGTCAGAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: STWGLPSVPPPASVDGSSWYTVF*FPSELG
Trigger: CCCCAGCTCTGACGGGAAGCAGAAGACAGTGTACCA...GGAGCTCCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000535268.5
CDS-3UTR GCA 90 bp CAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAATTCTCCTCCAGCCGCTaGTTCTCGGTATTGGCCTCG +
Preference number: 4 (lower is better)
Translates to: QVSPSSFQGGSPKKVWGEFSSSR*FSVLAS
Trigger: CGAGGCCAATACCGAGAAGCAGCGGCTGGAGGAGAA...TTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GGAAGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATCTCTTCCTCCGAGCTaGAGCTGCTGCCCGGCCCGC +
Preference number: 4 (lower is better)
Translates to: GRAGNGLGERPFSTKLSASLPPS*SCCPAR
Trigger: GCGGGCCGGGCAGCAGCTGCAGCTCGGAGGAAGAGA...TGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GGCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCACATATGCCAGTCTTaGTTCTCCTTGGCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: GQGLLPSNPHGGYHQYPLHICQS*FSLASQ
Trigger: CTGGGAGGCCAAGGAGAAGCAAGACTGGCATATGTG...GAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp TGGGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCATGTTGGGGCACATATaGCAGTCTTGCTTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: WGLERTQVSPSSFQGGSPMLGHI*QSCFSL
Trigger: CAAGGAGAAGCAAGACTGGCATATGTGCCCCAACAT...GGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GGGATGCAAGGTCTCTGGTGCCCAGGTCACCAGCCCAGGCTGGGCCAAGGGTTTATGTTGGGGCACATATaGCAGTCTTGCTTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: GMQGLWCPGHQPRLGQGFMLGHI*QSCFSL
Trigger: CAAGGAGAAGCAAGACTGGCATATGTGCCCCAACAT...AAACCCTTGGCCCAGCCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GCTTCTCCTTGGCCTCCCAGTAGCCGCCCTTGTACACACAGGCCATCTCCCCGGATGTTGGGGCACATATaGCAGTCTTGCTTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: ASPWPPSSRPCTHRPSPRMLGHI*QSCFSL
Trigger: CAAGGAGAAGCAAGACTGGCATATGTGCCCCAACAT...CCGGGGAGATGGCCTGTGTGTACAAGGGCGGCTACTGGGAGGCCAAGGAGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452656.5
CDS-3UTR GCA 90 bp CTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAAGGTGGGCCAGGCTGTaGAGGCGCCTGTATTTGTTG +
Preference number: 4 (lower is better)
Translates to: LERTQVSPSSFQGGSPKKRWARL*RRLYLL
Trigger: CAACAAATACAGGCGCCTGCACAGCCTGGCCCACCT...TTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GGGCCAAGGGTTTGTTCATTATTGCTGATTTGGGGCCTGGGTCTCAGGGCGGGGATCAGTACCCCCTCCTaGATCTGTGGATGGGAGCTC +
Preference number: 4 (lower is better)
Translates to: GPRVCSLLLIWGLGLRAGISTPS*ICGWEL
Trigger: GAGCTCCCATCCACAGATGCAGGAGGGGGTACTGAT...CCCCGCCCTGAGACCCAGGCCCCAAATCAGCAATAATGAACAAACCCTTGGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp CTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGATGCAAGGTCTCTGGTaGCCAGGTCACCAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: LKSTWGLPSVPPPASVDGMQGLW*PGHQPR
Trigger: CCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCAT...CCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GGGCCAGCCGGCCTGAGTTGTGGTAACTGGGGCAGGGGTTCCGGTAGGGCCCAGTTACTGGTCAAAAGGTaGTCGCTAACAAAACAGTGT +
Preference number: 4 (lower is better)
Translates to: GPAGLSCGNWGRGSGRAQLLVKR*SLTKQC
Trigger: ACACTGTTTTGTTAGCGAGCACCTTTTGACCAGTAA...CTGGGCCCTACCGGAACCCCTGCCCCAGTTACCACAACTCAGGCCGGCTGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000437268.6
ENST00000535268.5
CDS-3UTR GCA 90 bp GGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAACGGAACTTGTCCCGGTaGTACCTTCAGCTTTTCTGT +
Preference number: 4 (lower is better)
Translates to: GAGENPGQPFLLPRWESQRNLSR*YLQLFC
Trigger: ACAGAAAAGCTGAAGGTAGCACCGGGACAAGTTCCG...TTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401475.5
ENST00000403222.7
ENST00000438716.3
ENST00000535268.5
CDS-3UTR GCA 90 bp CCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAGTGATCTTGGTTCACTaGAGCCTCCGCTTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: PGQPFLLPRWESQESVGRVILVH*SLRFPG
Trigger: ACCTGGGAAGCGGAGGCTGCAGTGAACCAAGATCAC...TCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438716.3
CDS-3UTR CCA 90 bp TCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGAGCTCCGCCAGTCCCCGACATTaGAACCCCAAGAGGAGTCTT +
Preference number: 4 (lower is better)
Translates to: STWGLPSVPPPASVDGSSASPRH*NPKRSL
Trigger: AAGACTCCTCTTGGGGTTCCAATGTCGGGGACTGGC...GGAGCTCCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000332585.11
CDS-3UTR CCA 90 bp GCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGCTCCTGGCCCCACTaGTCAGCAAGATACCACAAG +
Preference number: 4 (lower is better)
Translates to: AGENPGQPFLLPRWESQESSWPH*SARYHK
Trigger: CTTGTGGTATCTTGCTGACCAGTGGGGCCAGGAGCT...TTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000438716.3
CDS-3UTR CCA 90 bp GCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCAGATTCTTCAGGGTGTaGTGCAGCTCGCTCTTGTCG +
Preference number: 4 (lower is better)
Translates to: ARDCCPQIHMGVTISTPSRFFRV*CSSLLS
Trigger: CGACAAGAGCGAGCTGCACCACACCCTGAAGAATCT...GGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000437268.6
CDS-3UTR CCA 90 bp CTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAACTCCCCACTCTCAGATaGGATCTTGAGGCCGTCCAG +
Preference number: 4 (lower is better)
Translates to: LERTQVSPSSFQGGSPKKLPTLR*DLEAVQ
Trigger: CTGGACGGCCTCAAGATCCCATCTGAGAGTGGGGAG...TTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000437268.6
ENST00000438716.3
CDS-3UTR CCA 90 bp CAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAACTCCCCACTCTCAGATaGGATCTTGAGGCCGTCCAG +
Preference number: 4 (lower is better)
Translates to: QVSPSSFQGGSPKKVWGELPTLR*DLEAVQ
Trigger: CTGGACGGCCTCAAGATCCCATCTGAGAGTGGGGAG...TTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000437268.6
ENST00000438716.3
CDS-3UTR CCA 90 bp CCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGATCGCCAGCTGCTCAATaGTTTCCTCCAAGTGCACGC +
Preference number: 4 (lower is better)
Translates to: PGQPFLLPRWESQESVGRSPAAQ*FPPSAR
Trigger: GCGTGCACTTGGAGGAAACCATTGAGCAGCTGGCGA...TCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAACTTTGGATGAACCCTTaGGCACGAGCGAGGCACCAT +
Preference number: 4 (lower is better)
Translates to: AGENPGQPFLLPRWESQELWMNP*ARARHH
Trigger: ATGGTGCCTCGCTCGTGCCCAAGGGTTCATCCAAAG...TTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGTGTAGTTGGGCTTGTTaGGAATGCGGACTCGCCTCT +
Preference number: 4 (lower is better)
Translates to: PRSALPPSKVGVPRKCGECSWAC*ECGLAS
Trigger: AGAGGCGAGTCCGCATTCCCAACAAGCCCAACTACA...CTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGAAGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCACCGGCATGGGGATCCTaGAGAGCTCCCGGCCGATGC +
Preference number: 4 (lower is better)
Translates to: GRAGNGLGERPFSTKLSAPAWGS*RAPGRC
Trigger: GCATCGGCCGGGAGCTCTCCAGGATCCCCATGCCGG...TGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp TCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGAGCTCCTTGTCCAGCAGGTGGTaGTACTCCAGGTCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: STWGLPSVPPPASVDGSSLSSRW*YSRSSV
Trigger: GACAGAGGACCTGGAGTACCACCACCTGCTGGACAA...GGAGCTCCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAATTGTCCAGCAGGTGGTaGTACTCCAGGTCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: AGENPGQPFLLPRWESQELSSRW*YSRSSV
Trigger: GACAGAGGACCTGGAGTACCACCACCTGCTGGACAA...TTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGATCTGCTCCACTGAGCTaGTGCAGTGCACTGCCTTGT +
Preference number: 4 (lower is better)
Translates to: PGQPFLLPRWESQESVGRSAPLS*CSALPC
Trigger: ACAAGGCAGTGCACTGCACCAGCTCAGTGGAGCAGA...TCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGGCCTGGAATTCTAAGTaGATGGCACCTAGCGGCATG +
Preference number: 4 (lower is better)
Translates to: PRSALPPSKVGVPRKCGEAWNSK*MAPSGM
Trigger: CATGCCGCTAGGTGCCATCCACTTAGAATTCCAGGC...CTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCGCCTGGAATTCTAAGTaGATGGCACCTAGCGGCATG +
Preference number: 4 (lower is better)
Translates to: ARDCCPQIHMGVTISTPSAWNSK*MAPSGM
Trigger: CATGCCGCTAGGTGCCATCCACTTAGAATTCCAGGC...GGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp TGGGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCCGTAGTGATTCCCACTaGCCTGGAATTCTAAGTGGA +
Preference number: 4 (lower is better)
Translates to: WGLERTQVSPSSFQGGSPRSDSH*PGILSG
Trigger: TCCACTTAGAATTCCAGGCCAGTGGGAATCACTACG...GGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CAGGTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCTGGGGGCTGGAGAGACGGTCATTGGTCTTATaGTTCACAATCTCGATGTCC +
Preference number: 4 (lower is better)
Translates to: QVHNEGARVTRRTWGLERRSLVL*FTISMS
Trigger: GGACATCGAGATTGTGAACCATAAGACCAATGACCG...TCTCTCCAGCCCCCAGGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGACCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGGATGCAAGGTCTCTGGTGCCCAGGTCACCAGCCCAGGCTGGGCCAAGGGTTTGCTGGCACCGGTCATTaGTCTTATGGTTCACAATCT +
Preference number: 4 (lower is better)
Translates to: GMQGLWCPGHQPRLGQGFAGTGH*SYGSQS
Trigger: AGATTGTGAACCATAAGACCAATGACCGGTGCCAGC...AAACCCTTGGCCCAGCCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCATCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGGCCAAGGGTTTGTTCATTATTGCTGATTTGGGGCCTGGGTCTCAGGGCGGGGTCCGGGCTGCCTCTTTaGAGAAGTAGCTGTAGGGCA +
Preference number: 4 (lower is better)
Translates to: GPRVCSLLLIWGLGLRAGSGLPL*RSSCRA
Trigger: TGCCCTACAGCTACTTCTCCAAAGAGGCAGCCCGGA...CCCCGCCCTGAGACCCAGGCCCCAAATCAGCAATAATGAACAAACCCTTGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGGCTTCCCGTCAGAGCTaGGGCTGCTGGGACTGCTAT +
Preference number: 4 (lower is better)
Translates to: LKSTWGLPSVPPPASVDGASRQS*GCWDCY
Trigger: ATAGCAGTCCCAGCAGCCCCAGCTCTGACGGGAAGC...CCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000535268.5
CDS-3UTR CCA 90 bp AGCGGGTACTTCTTCCACAGCAGCTTGGCTGACAGGGTCTGGTACACTGTCTTCGCTTCCCGTCAGAGCTaGGGCTGCTGGGACTGCTAT +
Preference number: 4 (lower is better)
Translates to: SGYFFHSSLADRVWYTVFASRQS*GCWDCY
Trigger: ATAGCAGTCCCAGCAGCCCCAGCTCTGACGGGAAGC...GAAGACAGTGTACCAGACCCTGTCAGCCAAGCTGCTGTGGAAGAAGTACCCGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433183.2
CDS-3UTR CCA 90 bp TCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGAGCTCCCTTCTCAAACCACAGTaGCGTGTAGGCATCCGCCTC +
Preference number: 4 (lower is better)
Translates to: STWGLPSVPPPASVDGSSLLKPQ*RVGIRL
Trigger: GAGGCGGATGCCTACACGCCACTGTGGTTTGAGAAG...GGAGCTCCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAAGTCTTGCTTCTCCTTaGCCTCCCAGTAGCCGCCCT +
Preference number: 4 (lower is better)
Translates to: QVSPSSFQGGSPKKVWGESLASP*PPSSRP
Trigger: AGGGCGGCTACTGGGAGGCCAAGGAGAAGCAAGACT...TTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAAGTCTTGCTTCTCCTTaGCCTCCCAGTAGCCGCCCT +
Preference number: 4 (lower is better)
Translates to: LERTQVSPSSFQGGSPKKSLASP*PPSSRP
Trigger: AGGGCGGCTACTGGGAGGCCAAGGAGAAGCAAGACT...TTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGCGCTCAGAAGATGTTaGGGCACATATGCCAGTCTT +
Preference number: 4 (lower is better)
Translates to: GAGENPGQPFLLPRWESQALRRC*GTYASL
Trigger: AAGACTGGCATATGTGCCCCAACATCTTCTGAGCGC...TTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp TGGGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCTATTTGTTGCAAGGGTaGCGCTCAGAAGATGTTGGG +
Preference number: 4 (lower is better)
Translates to: WGLERTQVSPSSFQGGSPYLLQG*RSEDVG
Trigger: CCCAACATCTTCTGAGCGCCACCCTTGCAACAAATA...GGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGCATTAATGAACAGGTaGGCCAGGCTGTGCAGGCGC +
Preference number: 4 (lower is better)
Translates to: LERTQVSPSSFQGGSPKKALMNR*ARLCRR
Trigger: GCGCCTGCACAGCCTGGCCCACCTGTTCATTAATGC...TTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAGCATTAATGAACAGGTaGGCCAGGCTGTGCAGGCGC +
Preference number: 4 (lower is better)
Translates to: QVSPSSFQGGSPKKVWGEALMNR*ARLCRR
Trigger: GCGCCTGCACAGCCTGGCCCACCTGTTCATTAATGC...TTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCGGGCTGGGAATGGGCTaGGAGAAAGACCATTCAGTA +
Preference number: 4 (lower is better)
Translates to: GQGLLPSNPHGGYHQYPLGLGMG*EKDHSV
Trigger: TACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCC...GAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAAATGTGCTCTGCTGGGCTaGGGCAGCCCCCTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: GQPFLLPRWESQESVGRKCALLG*GSPLLF
Trigger: AAACAGAAGGGGGCTGCCCCAGCCCAGCAGAGCACA...TTTTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGTGTGCTCTGCTGGGCTaGGGCAGCCCCCTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: LKSTWGLPSVPPPASVDGCALLG*GSPLLF
Trigger: AAACAGAAGGGGGCTGCCCCAGCCCAGCAGAGCACA...CCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGTGTGCTCTGCTGGGCTaGGGCAGCCCCCTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: PQIHMGVTISTPSCICGWCALLG*GSPLLF
Trigger: AAACAGAAGGGGGCTGCCCCAGCCCAGCAGAGCACA...CCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAATCCTGCATCTGTGGATaGGAGCTCCAGAAACTCTGT +
Preference number: 4 (lower is better)
Translates to: GAGENPGQPFLLPRWESQSCICG*ELQKLC
Trigger: ACAGAGTTTCTGGAGCTCCCATCCACAGATGCAGGA...TTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCGCCCTCAAATCCACATaGGGGTTACCATCAGTACCC +
Preference number: 4 (lower is better)
Translates to: GQGLLPSNPHGGYHQYPLALKST*GLPSVP
Trigger: GGGTACTGATGGTAACCCCCATGTGGATTTGAGGGC...GAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTCATTATTGCTGATTTaGGGCCTGGGTCTCAGGGCG +
Preference number: 4 (lower is better)
Translates to: ARDCCPQIHMGVTISTPSSLLLI*GLGLRA
Trigger: CGCCCTGAGACCCAGGCCCCAAATCAGCAATAATGA...GGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGGGGATTCTGAGGGGCTaGGTCAGTGGCCATGGTGGT +
Preference number: 4 (lower is better)
Translates to: LKSTWGLPSVPPPASVDGGILRG*VSGHGG
Trigger: ACCACCATGGCCACTGACCCAGCCCCTCAGAATCCC...CCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGTTCCGGTAGGGCCCAGGTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCAGGACTAAACTGAAATaGAAAGGATTGGAGTGTGGG +
Preference number: 4 (lower is better)
Translates to: GSGRAQVHNEGARVTRRTRTKLK*KGLECG
Trigger: CCCACACTCCAATCCTTTCCATTTCAGTTTAGTCCT...GGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGACCTGGGCCCTACCGGAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp AGTTCCTCCCTGGGTTGGGGGCTGGTGATTTGCGCAGCCCATGGCCCGGGCCAGCTAACAAAACAGTGTTaGGGAGAGGTACATTCCACA +
Preference number: 4 (lower is better)
Translates to: SSSLGWGLVICAAHGPGQLTKQC*GEVHST
Trigger: TGTGGAATGTACCTCTCCCCAACACTGTTTTGTTAG...CTGGCCCGGGCCATGGGCTGCGCAAATCACCAGCCCCCAACCCAGGGAGGAACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000437268.6
ENST00000535268.5
CDS-3UTR CCA 90 bp GTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAAAAGGCAGGCGCCTGGCGTaGCCCTGCTGTTCTCAGAAT +
Preference number: 4 (lower is better)
Translates to: VSPSSFQGGSPKKVWGEKGRRLA*PCCSQN
Trigger: ATTCTGAGAACAGCAGGGCCACGCCAGGCGCCTGCC...TTTTTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431368.5
ENST00000535268.5
CDS-3UTR TCA 90 bp TCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGAGCTCCGTCCCCAGAGTCATCTaGATGAGTGTTCATCACGCG +
Preference number: 4 (lower is better)
Translates to: STWGLPSVPPPASVDGSSVPRVI*MSVHHA
Trigger: CGCGTGATGAACACTCATTCAGATGACTCTGGGGAC...GGAGCTCCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
CDS-3UTR TCA 90 bp AGGCTGTGCAGGCGCCTGTATTTGTTGCAAGGGTGGCGCTCAGAAGATGTTGGGAGAGGCTTCCCTCAATaGAGCTCTTGGAGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: RLCRRLYLLQGWRSEDVGRGFPQ*SSWRGW
Trigger: CCAACCCCTCCAAGAGCTTCATTGAGGGAAGCCTCT...CCCAACATCTTCTGAGCGCCACCCTTGCAACAAATACAGGCGCCTGCACAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452656.5
CDS-3UTR TCA 90 bp CTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAACCTCTTGACTTTGGATaGACCCTTGGGCACGAGCGA +
Preference number: 4 (lower is better)
Translates to: LERTQVSPSSFQGGSPKKPLDFG*TLGHER
Trigger: TCGCTCGTGCCCAAGGGTTCATCCAAAGTCAAGAGG...TTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp CTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAATGCGGACTCGCCTCTTaGCTTTGGATGAACCCTTGG +
Preference number: 4 (lower is better)
Translates to: LERTQVSPSSFQGGSPKKCGLAS*LWMNPW
Trigger: CCAAGGGTTCATCCAAAGTCAAGAGGCGAGTCCGCA...TTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp CTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGTGGACAGGGGCTCATTaGAGTTCACCGGCATGGGGA +
Preference number: 4 (lower is better)
Translates to: LKSTWGLPSVPPPASVDGWTGAH*SSPAWG
Trigger: TCCCCATGCCGGTGAACTTCAATGAGCCCCTGTCCA...CCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp CCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGACTTGCTGGAGATGGTaGTCTCCTGCCAGAGGCTCC +
Preference number: 4 (lower is better)
Translates to: PQIHMGVTISTPSCICGWTCWRW*SPARGS
Trigger: GGAGCCTCTGGCAGGAGATCACCATCTCCAGCAAGT...CCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp CCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGATGGCACCTAGCGGCATaGTGGAGATGTATTTTCCCC +
Preference number: 4 (lower is better)
Translates to: PGQPFLLPRWESQESVGRWHLAA*WRCIFP
Trigger: GGGGAAAATACATCTCCATCATGCCGCTAGGTGCCA...TCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp CCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGCCCACGATGATGTTGTaGACAGTTGAGGTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: PRSALPPSKVGVPRKCGEPTMML*TVEVLF
Trigger: GAAGAGCACCTCAACTGTTCACAACATCATCGTGGG...CTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp GCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAATCTCGATGTCCCCTaGCTGGTCGATCCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: AGENPGQPFLLPRWESQENLDVP*LVDPEL
Trigger: AAGCTCTGGATCGACCAGTCAGGGGACATCGAGATT...TTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp CCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAATCTCGATGTCCCCTaGCTGGTCGATCCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: PGQPFLLPRWESQESVGRNLDVP*LVDPEL
Trigger: AAGCTCTGGATCGACCAGTCAGGGGACATCGAGATT...TCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp GGGCCAAGGGTTTGTTCATTATTGCTGATTTGGGGCCTGGGTCTCAGGGCGGGGAATCTCGATGTCCCCTaGCTGGTCGATCCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: GPRVCSLLLIWGLGLRAGNLDVP*LVDPEL
Trigger: AAGCTCTGGATCGACCAGTCAGGGGACATCGAGATT...CCCCGCCCTGAGACCCAGGCCCCAAATCAGCAATAATGAACAAACCCTTGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp GCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGGGACTGCTATGCATaGCCTTGGAGCACTCCATTT +
Preference number: 4 (lower is better)
Translates to: ARDCCPQIHMGVTISTPSWDCYA*PWSTPF
Trigger: AAATGGAGTGCTCCAAGGTCATGCATAGCAGTCCCA...GGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000535268.5
CDS-3UTR TCA 90 bp CTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGCCACAGCAGCTTGGCTaGCAGGGTCTGGTACACTGT +
Preference number: 4 (lower is better)
Translates to: LKSTWGLPSVPPPASVDGPQQLG*QGLVHC
Trigger: ACAGTGTACCAGACCCTGTCAGCCAAGCTGCTGTGG...CCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000535268.5
CDS-3UTR TCA 90 bp AGTTCCTCCCTGGGTTGGGGGCTGGTGATTTGCGCAGCCCATGGCCCGGGCCAGGAGGACTTGATATGTTaGGCTACAAAATTCTCCCAA +
Preference number: 4 (lower is better)
Translates to: SSSLGWGLVICAAHGPGQEDLIC*ATKFSQ
Trigger: TTGGGAGAATTTTGTAGCTCAACATATCAAGTCCTC...CTGGCCCGGGCCATGGGCTGCGCAAATCACCAGCCCCCAACCCAGGGAGGAACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAATACTGCAGTGCCCGCTaGCATTTCCGACTGTGTATC +
Preference number: 4 (lower is better)
Translates to: AGENPGQPFLLPRWESQEYCSAR*HFRLCI
Trigger: GATACACAGTCGGAAATGGCAGCGGGCACTGCAGTA...TTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp CTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAATGCTCCTGCTCATACTaGAGTGCCCGCTGCCATTTC +
Preference number: 4 (lower is better)
Translates to: LERTQVSPSSFQGGSPKKCSCSY*SARCHF
Trigger: GAAATGGCAGCGGGCACTGCAGTATGAGCAGGAGCA...TTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp CAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAATCCAAGTGCACGCGCTaGTCCTGCTCATACTGCAGT +
Preference number: 4 (lower is better)
Translates to: QVSPSSFQGGSPKKVWGESKCTR*SCSYCS
Trigger: ACTGCAGTATGAGCAGGAGCAGCGCGTGCACTTGGA...TTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp CTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAATCCAAGTGCACGCGCTaGTCCTGCTCATACTGCAGT +
Preference number: 4 (lower is better)
Translates to: LERTQVSPSSFQGGSPKKSKCTR*SCSYCS
Trigger: ACTGCAGTATGAGCAGGAGCAGCGCGTGCACTTGGA...TTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp CCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGATGTCACCTTCCGGGCTaGCTCTTTGGAGAAGTAGCT +
Preference number: 4 (lower is better)
Translates to: PGQPFLLPRWESQESVGRCHLPG*LFGEVA
Trigger: AGCTACTTCTCCAAAGAGGCAGCCCGGAAGGTGACA...TCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000535268.5
CDS-3UTR GCA 90 bp CTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAACTGCTGGGACTGCTATaGATGACCTTGGAGCACTCC +
Preference number: 4 (lower is better)
Translates to: LERTQVSPSSFQGGSPKKLLGLL*MTLEHS
Trigger: GGAGTGCTCCAAGGTCATGCATAGCAGTCCCAGCAG...TTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000535268.5
CDS-3UTR GCA 90 bp CAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAACTGCTGGGACTGCTATaGATGACCTTGGAGCACTCC +
Preference number: 4 (lower is better)
Translates to: QVSPSSFQGGSPKKVWGELLGLL*MTLEHS
Trigger: GGAGTGCTCCAAGGTCATGCATAGCAGTCCCAGCAG...TTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000535268.5
CDS-3UTR GCA 90 bp GCAGCGGGTACTTCTTCCACAGCAGCTTGGCTGACAGGGTCTGGTACACTGTCTTGGTACACTGTCTTCTaGTTCCCGTCAGAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: AAGTSSTAAWLTGSGTLSWYTVF*FPSELG
Trigger: CCCCAGCTCTGACGGGAAGCAGAAGACAGTGTACCA...AGACAGTGTACCAGACCCTGTCAGCCAAGCTGCTGTGGAAGAAGTACCCGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433183.2
CDS-3UTR GCA 90 bp GCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAACACATATGCCAGTCTTaGTTCTCCTTGGCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: AGENPGQPFLLPRWESQEHICQS*FSLASQ
Trigger: CTGGGAGGCCAAGGAGAAGCAAGACTGGCATATGTG...TTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp CCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGAGGTGGGCCAGGCTGTaGAGGCGCCTGTATTTGTTG +
Preference number: 4 (lower is better)
Translates to: PQIHMGVTISTPSCICGWRWARL*RRLYLL
Trigger: CAACAAATACAGGCGCCTGCACAGCCTGGCCCACCT...CCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAAAGGTGAGGCCAGGGACTaGTGCCCTCAAATCCACATG +
Preference number: 4 (lower is better)
Translates to: GQPFLLPRWESQESVGRKGEARD*CPQIHM
Trigger: CATGTGGATTTGAGGGCAGCAGTCCCTGGCCTCACC...TTTTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp CCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGGTGAGGCCAGGGACTaGTGCCCTCAAATCCACATG +
Preference number: 4 (lower is better)
Translates to: PQIHMGVTISTPSCICGWGEARD*CPQIHM
Trigger: CATGTGGATTTGAGGGCAGCAGTCCCTGGCCTCACC...CCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GGGATGCAAGGTCTCTGGTGCCCAGGTCACCAGCCCAGGCTGGGCCAAGGGTTTCCAAACTCAGACAGGTaGACCCGTCTTCATCATTTT +
Preference number: 4 (lower is better)
Translates to: GMQGLWCPGHQPRLGQGFPNSDR*TRLHHF
Trigger: AAAATGATGAAGACGGGTGCACCTGTCTGAGTTTGG...AAACCCTTGGCCCAGCCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp TGGGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCCCAAACTCAGACAGGTaGACCCGTCTTCATCATTTT +
Preference number: 4 (lower is better)
Translates to: WGLERTQVSPSSFQGGSPPNSDR*TRLHHF
Trigger: AAAATGATGAAGACGGGTGCACCTGTCTGAGTTTGG...GGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAAACTCCCCACTCTCAGATaGGATCTTGAGGCCGTCCAG +
Preference number: 4 (lower is better)
Translates to: GQPFLLPRWESQESVGRKLPTLR*DLEAVQ
Trigger: CTGGACGGCCTCAAGATCCCATCTGAGAGTGGGGAG...TTTTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000437268.6
ENST00000438716.3
CDS-3UTR CCA 90 bp CAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAATCGCCAGCTGCTCAATaGTTTCCTCCAAGTGCACGC +
Preference number: 4 (lower is better)
Translates to: QVSPSSFQGGSPKKVWGESPAAQ*FPPSAR
Trigger: GCGTGCACTTGGAGGAAACCATTGAGCAGCTGGCGA...TTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CAGGTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCTGGGGGCTGGAGAGAATGTGGAGTCTTCCATaGCATCAAAGTACTCGGTAT +
Preference number: 4 (lower is better)
Translates to: QVHNEGARVTRRTWGLERMWSLP*HQSTRY
Trigger: ATACCGAGTACTTTGATGCCATGGAAGACTCCACAT...TCTCTCCAGCCCCCAGGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGACCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp AGGAGGGATGCAAGGTCTCTGGTGCCCAGGTCACCAGCCCAGGCTGGGCCAAGGATGTGGAGTCTTCCATaGCATCAAAGTACTCGGTAT +
Preference number: 4 (lower is better)
Translates to: RRDARSLVPRSPAQAGPRMWSLP*HQSTRY
Trigger: ATACCGAGTACTTTGATGCCATGGAAGACTCCACAT...CCTTGGCCCAGCCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCATCCCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAACTTTGGATGAACCCTTaGGCACGAGCGAGGCACCAT +
Preference number: 4 (lower is better)
Translates to: LERTQVSPSSFQGGSPKKLWMNP*ARARHH
Trigger: ATGGTGCCTCGCTCGTGCCCAAGGGTTCATCCAAAG...TTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAATGTAGTTGGGCTTGTTaGGAATGCGGACTCGCCTCT +
Preference number: 4 (lower is better)
Translates to: AGENPGQPFLLPRWESQECSWAC*ECGLAS
Trigger: AGAGGCGAGTCCGCATTCCCAACAAGCCCAACTACA...TTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAATCTGCTCCACTGAGCTaGTGCAGTGCACTGCCTTGT +
Preference number: 4 (lower is better)
Translates to: QVSPSSFQGGSPKKVWGESAPLS*CSALPC
Trigger: ACAAGGCAGTGCACTGCACCAGCTCAGTGGAGCAGA...TTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAAAGGCTCCAGCCATGCTTaGAGAACACGTAGTGCGCAG +
Preference number: 4 (lower is better)
Translates to: GQPFLLPRWESQESVGRKGSSHA*RTRSAQ
Trigger: CTGCGCACTACGTGTTCTCCAAGCATGGCTGGAGCC...TTTTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAGCCTGGAATTCTAAGTaGATGGCACCTAGCGGCATG +
Preference number: 4 (lower is better)
Translates to: AGENPGQPFLLPRWESQEAWNSK*MAPSGM
Trigger: CATGCCGCTAGGTGCCATCCACTTAGAATTCCAGGC...TTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGTCGATGTCCCCTGACTaGTCGATCCAGAGCTTGCCC +
Preference number: 4 (lower is better)
Translates to: LKSTWGLPSVPPPASVDGSMSPD*SIQSLP
Trigger: GGGCAAGCTCTGGATCGACCAGTCAGGGGACATCGA...CCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGCTGGCACCGGTCATTaGTCTTATGGTTCACAATCT +
Preference number: 4 (lower is better)
Translates to: GAGENPGQPFLLPRWESQAGTGH*SYGSQS
Trigger: AGATTGTGAACCATAAGACCAATGACCGGTGCCAGC...TTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp TCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGAGCTCCGGCAGGAACTTCAGCTaGCACCGGTCATTGGTCTTA +
Preference number: 4 (lower is better)
Translates to: STWGLPSVPPPASVDGSSGRNFS*HRSLVL
Trigger: TAAGACCAATGACCGGTGCCAGCTGAAGTTCCTGCC...GGAGCTCCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAGGCAGGAACTTCAGCTaGCACCGGTCATTGGTCTTA +
Preference number: 4 (lower is better)
Translates to: AGENPGQPFLLPRWESQEGRNFS*HRSLVL
Trigger: TAAGACCAATGACCGGTGCCAGCTGAAGTTCCTGCC...TTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp TGGAGCACTCCATTTGTTCATCCCACGAGCCGGACAGCACGTAATGGGCCTTGCTCCGGGCTGCCTCTTTaGAGAAGTAGCTGTAGGGCA +
Preference number: 4 (lower is better)
Translates to: WSTPFVHPTSRTARNGPCSGLPL*RSSCRA
Trigger: TGCCCTACAGCTACTTCTCCAAAGAGGCAGCCCGGA...GCAAGGCCCATTACGTGCTGTCCGGCTCGTGGGATGAACAAATGGAGTGCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433183.2
CDS-3UTR CCA 90 bp GGGCCAAGGGTTTGTTCATTATTGCTGATTTGGGGCCTGGGTCTCAGGGCGGGGTCTTCCACAGCAGCTTaGCTGACAGGGTCTGGTACA +
Preference number: 4 (lower is better)
Translates to: GPRVCSLLLIWGLGLRAGSSTAA*LTGSGT
Trigger: TGTACCAGACCCTGTCAGCCAAGCTGCTGTGGAAGA...CCCCGCCCTGAGACCCAGGCCCCAAATCAGCAATAATGAACAAACCCTTGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000535268.5
CDS-3UTR CCA 90 bp CCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGATCTTCCACAGCAGCTTaGCTGACAGGGTCTGGTACA +
Preference number: 4 (lower is better)
Translates to: PGQPFLLPRWESQESVGRSSTAA*LTGSGT
Trigger: TGTACCAGACCCTGTCAGCCAAGCTGCTGTGGAAGA...TCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000535268.5
CDS-3UTR CCA 90 bp GCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAATCTTCCACAGCAGCTTaGCTGACAGGGTCTGGTACA +
Preference number: 4 (lower is better)
Translates to: AGENPGQPFLLPRWESQESSTAA*LTGSGT
Trigger: TGTACCAGACCCTGTCAGCCAAGCTGCTGTGGAAGA...TTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000535268.5
CDS-3UTR CCA 90 bp CTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAACTTCTCAAACCACAGTaGCGTGTAGGCATCCGCCTC +
Preference number: 4 (lower is better)
Translates to: LERTQVSPSSFQGGSPKKLLKPQ*RVGIRL
Trigger: GAGGCGGATGCCTACACGCCACTGTGGTTTGAGAAG...TTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGGCGCTCAGAAGATGTTaGGGCACATATGCCAGTCTT +
Preference number: 4 (lower is better)
Translates to: PRSALPPSKVGVPRKCGEALRRC*GTYASL
Trigger: AAGACTGGCATATGTGCCCCAACATCTTCTGAGCGC...CTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGGCCAAGGGTTTGTTCATTATTGCTGATTTGGGGCCTGGGTCTCAGGGCGGGGGGGCTGGGAATGGGCTaGGAGAAAGACCATTCAGTA +
Preference number: 4 (lower is better)
Translates to: GPRVCSLLLIWGLGLRAGGLGMG*EKDHSV
Trigger: TACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCC...CCCCGCCCTGAGACCCAGGCCCCAAATCAGCAATAATGAACAAACCCTTGGCCC
57% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAGGGCTGGGAATGGGCTaGGAGAAAGACCATTCAGTA +
Preference number: 4 (lower is better)
Translates to: PGQPFLLPRWESQESVGRGLGMG*EKDHSV
Trigger: TACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCC...TCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAGGAAATAGGAAGGGCTaGGAATGGGCTGGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: PGQPFLLPRWESQESVGRGNRKG*EWAGRK
Trigger: CTTTCTCCCAGCCCATTCCCAGCCCTTCCTATTTCC...TCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGAGTTCCTCCCTGGGTTaGGGGCTGGTGATTTGCGCA +
Preference number: 4 (lower is better)
Translates to: PQIHMGVTISTPSCICGWSSSLG*GLVICA
Trigger: TGCGCAAATCACCAGCCCCCAACCCAGGGAGGAACT...CCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGCCAGGACACTTTTGTaGCAAGAAAGCACACTTGGA +
Preference number: 4 (lower is better)
Translates to: GAGENPGQPFLLPRWESQARTLL*QESTLG
Trigger: TCCAAGTGTGCTTTCTTGCCACAAAAGTGTCCTGGC...TTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGTCCTGCATCTGTGGATaGGAGCTCCAGAAACTCTGT +
Preference number: 4 (lower is better)
Translates to: PRSALPPSKVGVPRKCGESCICG*ELQKLC
Trigger: ACAGAGTTTCTGGAGCTCCCATCCACAGATGCAGGA...CTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp TCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGAGCTCCTCATTATTGCTGATTTaGGGCCTGGGTCTCAGGGCG +
Preference number: 4 (lower is better)
Translates to: STWGLPSVPPPASVDGSSSLLLI*GLGLRA
Trigger: CGCCCTGAGACCCAGGCCCCAAATCAGCAATAATGA...GGAGCTCCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGATCATTATTGCTGATTTaGGGCCTGGGTCTCAGGGCG +
Preference number: 4 (lower is better)
Translates to: PGQPFLLPRWESQESVGRSLLLI*GLGLRA
Trigger: CGCCCTGAGACCCAGGCCCCAAATCAGCAATAATGA...TCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAGTCACCAGCCCAGGCTaGGCCAAGGGTTTGTTCATT +
Preference number: 4 (lower is better)
Translates to: QVSPSSFQGGSPKKVWGEVTSPG*AKGLFI
Trigger: AATGAACAAACCCTTGGCCCAGCCTGGGCTGGTGAC...TTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp AGCGGGTACTTCTTCCACAGCAGCTTGGCTGACAGGGTCTGGTACACTGTCTTCCACTCCTGTCACCTGTaGACATTGGCAGGACCAGCG +
Preference number: 4 (lower is better)
Translates to: SGYFFHSSLADRVWYTVFHSCHL*TLAGPA
Trigger: CGCTGGTCCTGCCAATGTCCACAGGTGACAGGAGTG...GAAGACAGTGTACCAGACCCTGTCAGCCAAGCTGCTGTGGAAGAAGTACCCGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433183.2
3UTR CAA 72 bp GCTGGGACTGCTATGCATGACCTTGGAGCACTCCATTaGTTCATCCCACGAGCCGGACAGCACGTAATGGGC +
Preference number: 4 (lower is better)
Translates to: AGTAMHDLGALH*FIPRAGQHVMG
Trigger: GCCCATTACGTGCTGTCCGGCTCGTGGGATGAACAAATGGAGTGCTCCAAGGTCATGCATAGCAGTCCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433183.2
3UTR CAA 72 bp TGGCGCTCAGAAGATGTTGGGGCACATATGCCAGTCTaGCTTCTCCTTGGCCTCCCAGTAGCCGCCCTTGTA +
Preference number: 4 (lower is better)
Translates to: WRSEDVGAHMPV*LLLGLPVAALV
Trigger: TACAAGGGCGGCTACTGGGAGGCCAAGGAGAAGCAAGACTGGCATATGTGCCCCAACATCTTCTGAGCGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452656.5
CDS-3UTR TCA 90 bp GGAAGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCACTGCCGGTCCACCTCTaGGCTGGCCTTGAGGTGGTA +
Preference number: 4 (lower is better)
Translates to: GRAGNGLGERPFSTKLSALPVHL*AGLEVV
Trigger: TACCACCTCAAGGCCAGCTCAGAGGTGGACCGGCAG...TGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000438716.3
CDS-3UTR TCA 90 bp CTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGGTCATTGCACGTGCTaGGGTCATCTAACTTCAGGG +
Preference number: 4 (lower is better)
Translates to: LERTQVSPSSFQGGSPKKGHCTC*GHLTSG
Trigger: CCCTGAAGTTAGATGACCTCAGCACGTGCAATGACC...TTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000437268.6
ENST00000438716.3
CDS-3UTR TCA 90 bp GGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAAATCTCAGATGGGATCTTaGGGCCGTCCAGCTCTGTCA +
Preference number: 4 (lower is better)
Translates to: GQPFLLPRWESQESVGRKSQMGS*GRPALS
Trigger: TGACAGAGCTGGACGGCCTCAAGATCCCATCTGAGA...TTTTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000437268.6
ENST00000438716.3
CDS-3UTR TCA 90 bp GGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAAAAGAGGCTTCCCTCAATaGAGCTCTTGGAGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: GQPFLLPRWESQESVGRKRGFPQ*SSWRGW
Trigger: CCAACCCCTCCAAGAGCTTCATTGAGGGAAGCCTCT...TTTTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp CTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGCCTCTTGACTTTGGATaGACCCTTGGGCACGAGCGA +
Preference number: 4 (lower is better)
Translates to: LKSTWGLPSVPPPASVDGPLDFG*TLGHER
Trigger: TCGCTCGTGCCCAAGGGTTCATCCAAAGTCAAGAGG...CCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp GTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAAAAACTTGCTGGAGATGGTaGTCTCCTGCCAGAGGCTCC +
Preference number: 4 (lower is better)
Translates to: VSPSSFQGGSPKKVWGEKTCWRW*SPARGS
Trigger: GGAGCCTCTGGCAGGAGATCACCATCTCCAGCAAGT...TTTTTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGAC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp CTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAATGGCACCTAGCGGCATaGTGGAGATGTATTTTCCCC +
Preference number: 4 (lower is better)
Translates to: LERTQVSPSSFQGGSPKKWHLAA*WRCIFP
Trigger: GGGGAAAATACATCTCCATCATGCCGCTAGGTGCCA...TTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp CCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAGATGTTGTGAACAGTTaGGGTGCTCTTCCTCCACAC +
Preference number: 4 (lower is better)
Translates to: PGQPFLLPRWESQESVGRDVVNS*GALPPH
Trigger: GTGTGGAGGAAGAGCACCTCAACTGTTCACAACATC...TCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp GGGCCAAGGGTTTGTTCATTATTGCTGATTTGGGGCCTGGGTCTCAGGGCGGGGCCCACGATGATGTTGTaGACAGTTGAGGTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: GPRVCSLLLIWGLGLRAGPTMML*TVEVLF
Trigger: GAAGAGCACCTCAACTGTTCACAACATCATCGTGGG...CCCCGCCCTGAGACCCAGGCCCCAAATCAGCAATAATGAACAAACCCTTGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp TCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGAGCTCCCCCACGATGATGTTGTaGACAGTTGAGGTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: STWGLPSVPPPASVDGSSPTMML*TVEVLF
Trigger: GAAGAGCACCTCAACTGTTCACAACATCATCGTGGG...GGAGCTCCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp GCAGCGGGTACTTCTTCCACAGCAGCTTGGCTGACAGGGTCTGGTACACTGTCTAATCTCGATGTCCCCTaGCTGGTCGATCCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: AAGTSSTAAWLTGSGTLSNLDVP*LVDPEL
Trigger: AAGCTCTGGATCGACCAGTCAGGGGACATCGAGATT...AGACAGTGTACCAGACCCTGTCAGCCAAGCTGCTGTGGAAGAAGTACCCGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433183.2
CDS-3UTR TCA 90 bp GGGCCAAGGGTTTGTTCATTATTGCTGATTTGGGGCCTGGGTCTCAGGGCGGGGTGGGACTGCTATGCATaGCCTTGGAGCACTCCATTT +
Preference number: 4 (lower is better)
Translates to: GPRVCSLLLIWGLGLRAGWDCYA*PWSTPF
Trigger: AAATGGAGTGCTCCAAGGTCATGCATAGCAGTCCCA...CCCCGCCCTGAGACCCAGGCCCCAAATCAGCAATAATGAACAAACCCTTGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000535268.5
CDS-3UTR TCA 90 bp GCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAATGGGACTGCTATGCATaGCCTTGGAGCACTCCATTT +
Preference number: 4 (lower is better)
Translates to: AGENPGQPFLLPRWESQEWDCYA*PWSTPF
Trigger: AAATGGAGTGCTCCAAGGTCATGCATAGCAGTCCCA...TTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000535268.5
CDS-3UTR TCA 90 bp GTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAAAACCACAGCAGCTTGGCTaGCAGGGTCTGGTACACTGT +
Preference number: 4 (lower is better)
Translates to: VSPSSFQGGSPKKVWGEKPQQLG*QGLVHC
Trigger: ACAGTGTACCAGACCCTGTCAGCCAAGCTGCTGTGG...TTTTTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000535268.5
CDS-3UTR TCA 90 bp GGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACATGAAGGGGCACGGGTaGCCCGGCGCACCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: GNGLGERPFSTKLSALMNMKGHG*PGAPGG
Trigger: GCCCCCAGGTGCGCCGGGTCACCCGTGCCCCTTCAT...GTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp AGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTACCGGGCCAGCCGGCCTaGGTTGTGGTAACTGGGGCA +
Preference number: 4 (lower is better)
Translates to: RAGNGLGERPFSTKLSALPGQPA*VVVTGA
Trigger: TGCCCCAGTTACCACAACTCAGGCCGGCTGGCCCGG...TAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp CCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAGCGGTCTGGCTTCCTaGTGTCTTAAAAATAAGGGG +
Preference number: 4 (lower is better)
Translates to: PRSALPPSKVGVPRKCGESGLAS*CLKNKG
Trigger: CCCCTTATTTTTAAGACATCAGGAAGCCAGACCGCT...CTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp CTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGTGGGCCATTTCACCCTaGTTTCTGTCTGTGGGTCGC +
Preference number: 4 (lower is better)
Translates to: LKSTWGLPSVPPPASVDGWAISP*FLSVGR
Trigger: GCGACCCACAGACAGAAATCAGGGTGAAATGGCCCA...CCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000403222.7
ENST00000407373.5
CDS-3UTR GCA 90 bp GGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAAATCCTCCGTGTCAATGTaGGCGGTGGACAGGTTGATG +
Preference number: 4 (lower is better)
Translates to: GQPFLLPRWESQESVGRKSSVSM*AVDRLM
Trigger: CATCAACCTGTCCACCGCGCACATTGACACGGAGGA...TTTTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000438716.3
CDS-3UTR GCA 90 bp CAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAATACTGCAGTGCCCGCTaGCATTTCCGACTGTGTATC +
Preference number: 4 (lower is better)
Translates to: QVSPSSFQGGSPKKVWGEYCSAR*HFRLCI
Trigger: GATACACAGTCGGAAATGGCAGCGGGCACTGCAGTA...TTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp CTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAATACTGCAGTGCCCGCTaGCATTTCCGACTGTGTATC +
Preference number: 4 (lower is better)
Translates to: LERTQVSPSSFQGGSPKKYCSAR*HFRLCI
Trigger: GATACACAGTCGGAAATGGCAGCGGGCACTGCAGTA...TTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAAACTGCTCATACTGCAGTaGCCGCTGCCATTTCCGACT +
Preference number: 4 (lower is better)
Translates to: GQPFLLPRWESQESVGRKLLILQ*PLPFPT
Trigger: AGTCGGAAATGGCAGCGGGCACTGCAGTATGAGCAG...TTTTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp CCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGCTGCTCATACTGCAGTaGCCGCTGCCATTTCCGACT +
Preference number: 4 (lower is better)
Translates to: PQIHMGVTISTPSCICGWLLILQ*PLPFPT
Trigger: AGTCGGAAATGGCAGCGGGCACTGCAGTATGAGCAG...CCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GGAAGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATGCACGCGCTGCTCCTaGTCATACTGCAGTGCCCGC +
Preference number: 4 (lower is better)
Translates to: GRAGNGLGERPFSTKLSACTRCS*SYCSAR
Trigger: GCGGGCACTGCAGTATGAGCAGGAGCAGCGCGTGCA...TGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp CCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGTCCAAGTGCACGCGCTaGTCCTGCTCATACTGCAGT +
Preference number: 4 (lower is better)
Translates to: PQIHMGVTISTPSCICGWSKCTR*SCSYCS
Trigger: ACTGCAGTATGAGCAGGAGCAGCGCGTGCACTTGGA...CCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp CTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGTCCAAGTGCACGCGCTaGTCCTGCTCATACTGCAGT +
Preference number: 4 (lower is better)
Translates to: LKSTWGLPSVPPPASVDGSKCTR*SCSYCS
Trigger: ACTGCAGTATGAGCAGGAGCAGCGCGTGCACTTGGA...CCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp AGGCTGTGCAGGCGCCTGTATTTGTTGCAAGGGTGGCGCTCAGAAGATGTTGGGCGGAACTTGTCCCGGTaGTACCTTCAGCTTTTCTGC +
Preference number: 4 (lower is better)
Translates to: RLCRRLYLLQGWRSEDVGRNLSR*YLQLFC
Trigger: GCAGAAAAGCTGAAGGTAGCACCGGGACAAGTTCCG...CCCAACATCTTCTGAGCGCCACCCTTGCAACAAATACAGGCGCCTGCACAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452656.5
CDS-3UTR GCA 90 bp GTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAAAAACTGAGCTGGTGCAGTaGACTGCCTTGTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: VSPSSFQGGSPKKVWGEKTELVQ*TALSSR
Trigger: CCTGCTGGACAAGGCAGTGCACTGCACCAGCTCAGT...TTTTTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGAC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAAAAGCTCCACTGAGCTGGTaGAGTGCACTGCCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: VSPSSFQGGSPKKVWGEKAPLSW*SALPCP
Trigger: TGGACAAGGCAGTGCACTGCACCAGCTCAGTGGAGC...TTTTTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGTGAACAGTTGAGGTaGTCTTCCTCCACACGTAGT +
Preference number: 4 (lower is better)
Translates to: ARDCCPQIHMGVTISTPSCEQLR*SSSTRS
Trigger: ACTACGTGTGGAGGAAGAGCACCTCAACTGTTCACA...GGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAAATGGTACACTGTCTTCTaGTTCCCGTCAGAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: GQPFLLPRWESQESVGRKWYTVF*FPSELG
Trigger: CCCCAGCTCTGACGGGAAGCAGAAGACAGTGTACCA...TTTTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000535268.5
CDS-3UTR GCA 90 bp GTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAAAATTCTCCTCCAGCCGCTaGTTCTCGGTATTGGCCTCG +
Preference number: 4 (lower is better)
Translates to: VSPSSFQGGSPKKVWGEKFSSSR*FSVLAS
Trigger: CGAGGCCAATACCGAGAAGCAGCGGCTGGAGGAGAA...TTTTTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp AGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTATCTCTTCCTCCGAGCTaGAGCTGCTGCCCGGCCCGC +
Preference number: 4 (lower is better)
Translates to: RAGNGLGERPFSTKLSALSLPPS*SCCPAR
Trigger: GCGGGCCGGGCAGCAGCTGCAGCTCGGAGGAAGAGA...TAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp CTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAACACATATGCCAGTCTTaGTTCTCCTTGGCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: LERTQVSPSSFQGGSPKKHICQS*FSLASQ
Trigger: CTGGGAGGCCAAGGAGAAGCAAGACTGGCATATGTG...TTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp CAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAACACATATGCCAGTCTTaGTTCTCCTTGGCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: QVSPSSFQGGSPKKVWGEHICQS*FSLASQ
Trigger: CTGGGAGGCCAAGGAGAAGCAAGACTGGCATATGTG...TTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCATGTTGGGGCACATATaGCAGTCTTGCTTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: ARDCCPQIHMGVTISTPSMLGHI*QSCFSL
Trigger: CAAGGAGAAGCAAGACTGGCATATGTGCCCCAACAT...GGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp CCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGATGTTGGGGCACATATaGCAGTCTTGCTTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: PRSALPPSKVGVPRKCGEMLGHI*QSCFSL
Trigger: CAAGGAGAAGCAAGACTGGCATATGTGCCCCAACAT...CTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp CTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGGGCGCCTGTATTTGTTaGAAGGGTGGCGCTCAGAAG +
Preference number: 4 (lower is better)
Translates to: LKSTWGLPSVPPPASVDGGACIC*KGGAQK
Trigger: CTTCTGAGCGCCACCCTTGCAACAAATACAGGCGCC...CCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GGAAGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCAAGAAACTCTGTGCTCTaGTGGGCTGGGGCAGCCCCC +
Preference number: 4 (lower is better)
Translates to: GRAGNGLGERPFSTKLSARNSVL*WAGAAP
Trigger: GGGGGCTGCCCCAGCCCAGCAGAGCACAGAGTTTCT...TGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp CTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGATCAGTACCCCCTCCTaGATCTGTGGATGGGAGCTC +
Preference number: 4 (lower is better)
Translates to: LKSTWGLPSVPPPASVDGISTPS*ICGWEL
Trigger: GAGCTCCCATCCACAGATGCAGGAGGGGGTACTGAT...CCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GTTTCACATTTATTTACTGTTCGGTGTCTGCCTTCACACTGGGATGTCGGCTGCTCCTTCCCTCTCCTTTaGCTGTGGCGGGGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: VSHLFTVRCLPSHWDVGCSFPLL*LWRGPC
Trigger: GCAGGGGCCCCGCCACAGGCAAAGGAGAGGGAAGGA...GCAGCCGACATCCCAGTGTGAAGGCAGACACCGAACAGTAAATAAATGTGAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433183.2
CDS-3UTR CCA 90 bp GGAAGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCACTCGCTCTTGTCGGCTaGGGTGGTAGCCTCGTCGTC +
Preference number: 4 (lower is better)
Translates to: GRAGNGLGERPFSTKLSALALVG*GGSLVV
Trigger: GACGACGAGGCTACCACCCCAGCCGACAAGAGCGAG...TGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000437268.6
ENST00000438716.3
CDS-3UTR CCA 90 bp CCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGTCGCCAGCTGCTCAATaGTTTCCTCCAAGTGCACGC +
Preference number: 4 (lower is better)
Translates to: PQIHMGVTISTPSCICGWSPAAQ*FPPSAR
Trigger: GCGTGCACTTGGAGGAAACCATTGAGCAGCTGGCGA...CCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CATATGCCAGTCTTGCTTCTCCTTGGCCTCCCAGTAGCCGCCCTTGTACACACATCGCCAGCTGCTCAATaGTTTCCTCCAAGTGCACGC +
Preference number: 4 (lower is better)
Translates to: HMPVLLLLGLPVAALVHTSPAAQ*FPPSAR
Trigger: GCGTGCACTTGGAGGAAACCATTGAGCAGCTGGCGA...TGTGTGTACAAGGGCGGCTACTGGGAGGCCAAGGAGAAGCAAGACTGGCATATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452656.5
CDS-3UTR CCA 90 bp CTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGCTTTGGATGAACCCTTaGGCACGAGCGAGGCACCAT +
Preference number: 4 (lower is better)
Translates to: LKSTWGLPSVPPPASVDGLWMNP*ARARHH
Trigger: ATGGTGCCTCGCTCGTGCCCAAGGGTTCATCCAAAG...CCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAATGTAGTTGGGCTTGTTaGGAATGCGGACTCGCCTCT +
Preference number: 4 (lower is better)
Translates to: LERTQVSPSSFQGGSPKKCSWAC*ECGLAS
Trigger: AGAGGCGAGTCCGCATTCCCAACAAGCCCAACTACA...TTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp AGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTACCGGCATGGGGATCCTaGAGAGCTCCCGGCCGATGC +
Preference number: 4 (lower is better)
Translates to: RAGNGLGERPFSTKLSALPAWGS*RAPGRC
Trigger: GCATCGGCCGGGAGCTCTCCAGGATCCCCATGCCGG...TAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAAATTGTCCAGCAGGTGGTaGTACTCCAGGTCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: GQPFLLPRWESQESVGRKLSSRW*YSRSSV
Trigger: GACAGAGGACCTGGAGTACCACCACCTGCTGGACAA...TTTTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAAATGCGGTGCACTGTGGTaGAGTAGGAGGACACAGAGA +
Preference number: 4 (lower is better)
Translates to: GQPFLLPRWESQESVGRKCGALW*SRRTQR
Trigger: TCTCTGTGTCCTCCTACTCCACCACAGTGCACCGCA...TTTTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGTGCGGTGCACTGTGGTaGAGTAGGAGGACACAGAGA +
Preference number: 4 (lower is better)
Translates to: LKSTWGLPSVPPPASVDGCGALW*SRRTQR
Trigger: TCTCTGTGTCCTCCTACTCCACCACAGTGCACCGCA...CCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAAAAGGCTCCAGCCATGCTTaGAGAACACGTAGTGCGCAG +
Preference number: 4 (lower is better)
Translates to: VSPSSFQGGSPKKVWGEKGSSHA*RTRSAQ
Trigger: CTGCGCACTACGTGTTCTCCAAGCATGGCTGGAGCC...TTTTTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGCCTGGAATTCTAAGTaGATGGCACCTAGCGGCATG +
Preference number: 4 (lower is better)
Translates to: LERTQVSPSSFQGGSPKKAWNSK*MAPSGM
Trigger: CATGCCGCTAGGTGCCATCCACTTAGAATTCCAGGC...TTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp ACAGGGTCTGGTACACTGTCTTCTGCTTCCCGTCAGAGCTGGGGCTGCTGGGACCGTAGTGATTCCCACTaGCCTGGAATTCTAAGTGGA +
Preference number: 4 (lower is better)
Translates to: TGSGTLSSASRQSWGCWDRSDSH*PGILSG
Trigger: TCCACTTAGAATTCCAGGCCAGTGGGAATCACTACG...GTCCCAGCAGCCCCAGCTCTGACGGGAAGCAGAAGACAGTGTACCAGACCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433183.2
CDS-3UTR CCA 90 bp GTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAAAATCGATGTCCCCTGACTaGTCGATCCAGAGCTTGCCC +
Preference number: 4 (lower is better)
Translates to: VSPSSFQGGSPKKVWGEKSMSPD*SIQSLP
Trigger: GGGCAAGCTCTGGATCGACCAGTCAGGGGACATCGA...TTTTTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp AGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTATTCTCCATCAGCCGCTaGTCGGGCCGCAGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: RAGNGLGERPFSTKLSALFSISR*SGRRRL
Trigger: CAGCCGCCTGCGGCCCGACCAGCGGCTGATGGAGAA...TAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGCTTCTCAAACCACAGTaGCGTGTAGGCATCCGCCTC +
Preference number: 4 (lower is better)
Translates to: PQIHMGVTISTPSCICGWLLKPQ*RVGIRL
Trigger: GAGGCGGATGCCTACACGCCACTGTGGTTTGAGAAG...CCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CAAGGGTGGCGCTCAGAAGATGTTGGGGCACATATGCCAGTCTTGCTTCTCCTTAGTCTTGCTTCTCCTTaGCCTCCCAGTAGCCGCCCT +
Preference number: 4 (lower is better)
Translates to: QGWRSEDVGAHMPVLLLLSLASP*PPSSRP
Trigger: AGGGCGGCTACTGGGAGGCCAAGGAGAAGCAAGACT...AAGGAGAAGCAAGACTGGCATATGTGCCCCAACATCTTCTGAGCGCCACCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452656.5
CDS-3UTR CCA 90 bp GCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAGCGCTCAGAAGATGTTaGGGCACATATGCCAGTCTT +
Preference number: 4 (lower is better)
Translates to: AGENPGQPFLLPRWESQEALRRC*GTYASL
Trigger: AAGACTGGCATATGTGCCCCAACATCTTCTGAGCGC...TTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGGCCAAGGGTTTGTTCATTATTGCTGATTTGGGGCCTGGGTCTCAGGGCGGGGGCGCTCAGAAGATGTTaGGGCACATATGCCAGTCTT +
Preference number: 4 (lower is better)
Translates to: GPRVCSLLLIWGLGLRAGALRRC*GTYASL
Trigger: AAGACTGGCATATGTGCCCCAACATCTTCTGAGCGC...CCCCGCCCTGAGACCCAGGCCCCAAATCAGCAATAATGAACAAACCCTTGGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp TCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGAGCTCCGCGCTCAGAAGATGTTaGGGCACATATGCCAGTCTT +
Preference number: 4 (lower is better)
Translates to: STWGLPSVPPPASVDGSSALRRC*GTYASL
Trigger: AAGACTGGCATATGTGCCCCAACATCTTCTGAGCGC...GGAGCTCCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp TCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGAGCTCCTTCCTCCTTCCAAGGTaGGAGTCCCAAGAAAGTGTG +
Preference number: 4 (lower is better)
Translates to: STWGLPSVPPPASVDGSSFLLPR*ESQESV
Trigger: CACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAA...GGAGCTCCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAATTCCTCCTTCCAAGGTaGGAGTCCCAAGAAAGTGTG +
Preference number: 4 (lower is better)
Translates to: AGENPGQPFLLPRWESQEFLLPR*ESQESV
Trigger: CACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAA...TTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGATTCCTCCTTCCAAGGTaGGAGTCCCAAGAAAGTGTG +
Preference number: 4 (lower is better)
Translates to: PGQPFLLPRWESQESVGRFLLPR*ESQESV
Trigger: CACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAA...TCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAAAACTGAGTTGTGGTAACTaGGGCAGGGGTTCCGGTAGG +
Preference number: 4 (lower is better)
Translates to: VSPSSFQGGSPKKVWGEKLSCGN*GRGSGR
Trigger: CCTACCGGAACCCCTGCCCCAGTTACCACAACTCAG...TTTTTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCGCCAGGACACTTTTGTaGCAAGAAAGCACACTTGGA +
Preference number: 4 (lower is better)
Translates to: ARDCCPQIHMGVTISTPSARTLL*QESTLG
Trigger: TCCAAGTGTGCTTTCTTGCCACAAAAGTGTCCTGGC...GGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGGATGCAAGGTCTCTGGTGCCCAGGTCACCAGCCCAGGCTGGGCCAAGGGTTTCAACTCAAAGCGGTCTaGCTTCCTGATGTCTTAAAA +
Preference number: 4 (lower is better)
Translates to: GMQGLWCPGHQPRLGQGFQLKAV*LPDVLK
Trigger: TTTTAAGACATCAGGAAGCCAGACCGCTTTGAGTTG...AAACCCTTGGCCCAGCCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAATTTGGAGCAATAGGGTaGCAGGCTGTCCAGGTATTC +
Preference number: 4 (lower is better)
Translates to: AGENPGQPFLLPRWESQEFGAIG*QAVQVF
Trigger: GAATACCTGGACAGCCTGCCACCCTATTGCTCCAAA...TTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401475.5
CDS-3UTR CCA 90 bp CTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAACACTGTCCTCTCCTTTaGGAGTCAAGAGGTCACCCT +
Preference number: 4 (lower is better)
Translates to: LERTQVSPSSFQGGSPKKHCPLL*ESRGHP
Trigger: AGGGTGACCTCTTGACTCCCAAAGGAGAGGACAGTG...TTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403222.7
CDS-3UTR CCA 90 bp AGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAGGAGAGGCAGGCGCCTaGCGTGGCCCTGCTGTTCTC +
Preference number: 4 (lower is better)
Translates to: RAGNGLGERPFSTKLSALGEAGA*RGPAVL
Trigger: GAGAACAGCAGGGCCACGCCAGGCGCCTGCCTCTCC...TAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431368.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGAAGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCAGGCCTCCCTAGTAGCTaGAATTCCACGGCCCGCACC +
Preference number: 4 (lower is better)
Translates to: GRAGNGLGERPFSTKLSAGLPSS*NSTART
Trigger: GGTGCGGGCCGTGGAATTCCAGCTACTAGGGAGGCC...TGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438716.3
CDS-3UTR TCA 90 bp GGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAAAGGTCATTGCACGTGCTaGGGTCATCTAACTTCAGGG +
Preference number: 4 (lower is better)
Translates to: GQPFLLPRWESQESVGRKGHCTC*GHLTSG
Trigger: CCCTGAAGTTAGATGACCTCAGCACGTGCAATGACC...TTTTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000437268.6
ENST00000438716.3
CDS-3UTR TCA 90 bp GTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAAAATCTCAGATGGGATCTTaGGGCCGTCCAGCTCTGTCA +
Preference number: 4 (lower is better)
Translates to: VSPSSFQGGSPKKVWGEKSQMGS*GRPALS
Trigger: TGACAGAGCTGGACGGCCTCAAGATCCCATCTGAGA...TTTTTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000437268.6
ENST00000438716.3
CDS-3UTR TCA 90 bp GTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAAAATGCGGACTCGCCTCTTaGCTTTGGATGAACCCTTGG +
Preference number: 4 (lower is better)
Translates to: VSPSSFQGGSPKKVWGEKCGLAS*LWMNPW
Trigger: CCAAGGGTTCATCCAAAGTCAAGAGGCGAGTCCGCA...TTTTTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp AGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTACCCCCAGCATGGGGTTaGAGGGCTTGGCGATGCGGT +
Preference number: 4 (lower is better)
Translates to: RAGNGLGERPFSTKLSALPPAWG*RAWRCG
Trigger: ACCGCATCGCCAAGCCCTTCAACCCCATGCTGGGGG...TAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp CTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGATGTTGTGAACAGTTaGGGTGCTCTTCCTCCACAC +
Preference number: 4 (lower is better)
Translates to: LERTQVSPSSFQGGSPKKDVVNS*GALPPH
Trigger: GTGTGGAGGAAGAGCACCTCAACTGTTCACAACATC...TTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp CAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAACCCACGATGATGTTGTaGACAGTTGAGGTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: QVSPSSFQGGSPKKVWGEPTMML*TVEVLF
Trigger: GAAGAGCACCTCAACTGTTCACAACATCATCGTGGG...TTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp TGGAGCACTCCATTTGTTCATCCCACGAGCCGGACAGCACGTAATGGGCCTTGCCCCACGATGATGTTGTaGACAGTTGAGGTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: WSTPFVHPTSRTARNGPCPTMML*TVEVLF
Trigger: GAAGAGCACCTCAACTGTTCACAACATCATCGTGGG...GCAAGGCCCATTACGTGCTGTCCGGCTCGTGGGATGAACAAATGGAGTGCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433183.2
CDS-3UTR TCA 90 bp TGGAGCACTCCATTTGTTCATCCCACGAGCCGGACAGCACGTAATGGGCCTTGCAGAGCTTGCCCACGATaGTGTTGTGAACAGTTGAGG +
Preference number: 4 (lower is better)
Translates to: WSTPFVHPTSRTARNGPCRACPR*CCEQLR
Trigger: CCTCAACTGTTCACAACATCATCGTGGGCAAGCTCT...GCAAGGCCCATTACGTGCTGTCCGGCTCGTGGGATGAACAAATGGAGTGCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433183.2
CDS-3UTR TCA 90 bp CTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAAGAGCTTGCCCACGATaGTGTTGTGAACAGTTGAGG +
Preference number: 4 (lower is better)
Translates to: LERTQVSPSSFQGGSPKKRACPR*CCEQLR
Trigger: CCTCAACTGTTCACAACATCATCGTGGGCAAGCTCT...TTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp AGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTACCTCCTCGTGCTCGTTaGGGGTCAGGGCCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: RAGNGLGERPFSTKLSALPPRAR*GSGPAL
Trigger: CAGAGCTGGCCCTGACCCTCAACGAGCACGAGGAGG...TAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp GGGCCAAGGGTTTGTTCATTATTGCTGATTTGGGGCCTGGGTCTCAGGGCGGGGAGCGGTCTGGCTTCCTaGTGTCTTAAAAATAAGGGG +
Preference number: 4 (lower is better)
Translates to: GPRVCSLLLIWGLGLRAGSGLAS*CLKNKG
Trigger: CCCCTTATTTTTAAGACATCAGGAAGCCAGACCGCT...CCCCGCCCTGAGACCCAGGCCCCAAATCAGCAATAATGAACAAACCCTTGGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp GGGATGCAAGGTCTCTGGTGCCCAGGTCACCAGCCCAGGCTGGGCCAAGGGTTTGAGGACTTGATATGTTaGGCTACAAAATTCTCCCAA +
Preference number: 4 (lower is better)
Translates to: GMQGLWCPGHQPRLGQGFEDLIC*ATKFSQ
Trigger: TTGGGAGAATTTTGTAGCTCAACATATCAAGTCCTC...AAACCCTTGGCCCAGCCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCATCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp AGGAGGGATGCAAGGTCTCTGGTGCCCAGGTCACCAGCCCAGGCTGGGCCAAGGATACCATCGAGGACTTaGTATGTTGAGCTACAAAAT +
Preference number: 4 (lower is better)
Translates to: RRDARSLVPRSPAQAGPRIPSRT*YVELQN
Trigger: ATTTTGTAGCTCAACATATCAAGTCCTCGATGGTAT...CCTTGGCCCAGCCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCATCCCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACACGTGGAAGCGCTCATaGCCGGCGCCGCCGTGTGGC +
Preference number: 4 (lower is better)
Translates to: GNGLGERPFSTKLSALMNTWKRS*PAPPCG
Trigger: GCCACACGGCGGCGCCGGGCATGAGCGCTTCCACGT...GTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332585.11
CDS-3UTR GCA 90 bp AGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTACAGGGAGCGCTGGAGTaGAGCGCCGTGCTTGGCGAT +
Preference number: 4 (lower is better)
Translates to: RAGNGLGERPFSTKLSALQGALE*SAVLGD
Trigger: ATCGCCAAGCACGGCGCTGCACTCCAGCGCTCCCTG...TAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000437268.6
ENST00000438716.3
CDS-3UTR GCA 90 bp GTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAAAATCGAGGCTGTTGTGCTaGTTCGCCAGCTGCTCAATG +
Preference number: 4 (lower is better)
Translates to: VSPSSFQGGSPKKVWGEKSRLLC*FASCSM
Trigger: CATTGAGCAGCTGGCGAAGCAGCACAACAGCCTCGA...TTTTTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GGAAGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCACGCTCGAGGCTGTTGTaGTGCTTCGCCAGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: GRAGNGLGERPFSTKLSARSRLL*CFASCS
Trigger: TGAGCAGCTGGCGAAGCAGCACAACAGCCTCGAGCG...TGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp AGGCTGTGCAGGCGCCTGTATTTGTTGCAAGGGTGGCGCTCAGAAGATGTTGGGTACCTTCAGCTTTTCTaGTGTCTTCCTTGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: RLCRRLYLLQGWRSEDVGYLQLF*CLPWPR
Trigger: CCGAGGCCAAGGAAGACAGCAGAAAAGCTGAAGGTA...CCCAACATCTTCTGAGCGCCACCCTTGCAACAAATACAGGCGCCTGCACAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452656.5
CDS-3UTR GCA 90 bp CCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGCGGAACTTGTCCCGGTaGTACCTTCAGCTTTTCTGC +
Preference number: 4 (lower is better)
Translates to: PQIHMGVTISTPSCICGWRNLSR*YLQLFC
Trigger: GCAGAAAAGCTGAAGGTAGCACCGGGACAAGTTCCG...CCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000332585.11
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
CDS-3UTR GCA 90 bp GGAAGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCAGCTGGTGCAGTGCACTaGCTTGTCCAGCAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: GRAGNGLGERPFSTKLSAAGAVH*LVQQVV
Trigger: CACCACCTGCTGGACAAGGCAGTGCACTGCACCAGC...TGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp TCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGAGCTCCTGTGAACAGTTGAGGTaGTCTTCCTCCACACGTAGT +
Preference number: 4 (lower is better)
Translates to: STWGLPSVPPPASVDGSSCEQLR*SSSTRS
Trigger: ACTACGTGTGGAGGAAGAGCACCTCAACTGTTCACA...GGAGCTCCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp CCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGTGTCACCTTCCGGGCTaGCTCTTTGGAGAAGTAGCT +
Preference number: 4 (lower is better)
Translates to: PQIHMGVTISTPSCICGWCHLPG*LFGEVA
Trigger: AGCTACTTCTCCAAAGAGGCAGCCCGGAAGGTGACA...CCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000535268.5
CDS-3UTR GCA 90 bp AGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAGCTACGCCCTCCTCGTaGTCGTTGAGGGTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: RAGNGLGERPFSTKLSALATPSS*SLRVRA
Trigger: GGCCCTGACCCTCAACGAGCACGAGGAGGGCGTAGC...TAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp CTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACAGGTGGGCCTGGGGGCTGGTGATTTaGGCAGCCCATGGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: LGERPFSTKLSALMNRWAWGLVI*AAHGPG
Trigger: GCCCGGGCCATGGGCTGCGCAAATCACCAGCCCCCA...GGCCCACCTGTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GGAAGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCAGCTCCAGAAACTCTGTaGTCTGCTGGGCTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: GRAGNGLGERPFSTKLSAAPETL*SAGLGQ
Trigger: CTGCCCCAGCCCAGCAGAGCACAGAGTTTCTGGAGC...TGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCCCAAACTCAGACAGGTaGACCCGTCTTCATCATTTT +
Preference number: 4 (lower is better)
Translates to: ARDCCPQIHMGVTISTPSPNSDR*TRLHHF
Trigger: AAAATGATGAAGACGGGTGCACCTGTCTGAGTTTGG...GGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp CAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAACGGAACTTGTCCCGGTaGTACCTTCAGCTTTTCTGT +
Preference number: 4 (lower is better)
Translates to: QVSPSSFQGGSPKKVWGERNLSR*YLQLFC
Trigger: ACAGAAAAGCTGAAGGTAGCACCGGGACAAGTTCCG...TTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000401475.5
ENST00000403222.7
ENST00000438716.3
ENST00000535268.5
CDS-3UTR GCA 90 bp TGGAGCACTCCATTTGTTCATCCCACGAGCCGGACAGCACGTAATGGGCCTTGCCACTGGGATGTCGGCTaGATAATACTGTTCTCTGCC +
Preference number: 4 (lower is better)
Translates to: WSTPFVHPTSRTARNGPCHWDVG*IILFSA
Trigger: GGCAGAGAACAGTATTATGCAGCCGACATCCCAGTG...GCAAGGCCCATTACGTGCTGTCCGGCTCGTGGGATGAACAAATGGAGTGCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433183.2
CDS-3UTR CCA 90 bp GTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAAAAAGCTCCTGGCCCCACTaGTCAGCAAGATACCACAAG +
Preference number: 4 (lower is better)
Translates to: VSPSSFQGGSPKKVWGEKSSWPH*SARYHK
Trigger: CTTGTGGTATCTTGCTGACCAGTGGGGCCAGGAGCT...TTTTTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGAC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000438716.3
CDS-3UTR CCA 90 bp TACCATCGAGGACTTGATATGTTGAGCTACAAAATTCTCCCAACTCAAAGCGGTCGGCCAGGGGCACTGTaGAAGGCCCGCTCGAGGCTG +
Preference number: 4 (lower is better)
Translates to: YHRGLDMLSYKILPTQSGRPGAL*KARSRL
Trigger: CAGCCTCGAGCGGGCCTTCCACAGTGCCCCTGGCCG...ACCGCTTTGAGTTGGGAGAATTTTGTAGCTCAACATATCAAGTCCTCGATGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGTGTAGTTGGGCTTGTTaGGAATGCGGACTCGCCTCT +
Preference number: 4 (lower is better)
Translates to: LKSTWGLPSVPPPASVDGCSWAC*ECGLAS
Trigger: AGAGGCGAGTCCGCATTCCCAACAAGCCCAACTACA...CCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACAGGTGGGCCCCGGCATGGGGATCCTaGAGAGCTCCCGGCCGATGC +
Preference number: 4 (lower is better)
Translates to: LGERPFSTKLSALMNRWAPAWGS*RAPGRC
Trigger: GCATCGGCCGGGAGCTCTCCAGGATCCCCATGCCGG...GGCCCACCTGTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGACGTAGTGATTCCCACTaGCCTGGAATTCTAAGTGGA +
Preference number: 4 (lower is better)
Translates to: PGQPFLLPRWESQESVGRRSDSH*PGILSG
Trigger: TCCACTTAGAATTCCAGGCCAGTGGGAATCACTACG...TCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCCGGTCATTGGTCTTATaGTTCACAATCTCGATGTCC +
Preference number: 4 (lower is better)
Translates to: ARDCCPQIHMGVTISTPSRSLVL*FTISMS
Trigger: GGACATCGAGATTGTGAACCATAAGACCAATGACCG...GGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAGCTGGCACCGGTCATTaGTCTTATGGTTCACAATCT +
Preference number: 4 (lower is better)
Translates to: PGQPFLLPRWESQESVGRAGTGH*SYGSQS
Trigger: AGATTGTGAACCATAAGACCAATGACCGGTGCCAGC...TCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAATTGGCTGACAGGGTCTaGTACACTGTCTTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: QVSPSSFQGGSPKKVWGELADRV*YTVFCF
Trigger: GAAGCAGAAGACAGTGTACCAGACCCTGTCAGCCAA...TTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000535268.5
CDS-3UTR CCA 90 bp CCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGTCTTCCACAGCAGCTTaGCTGACAGGGTCTGGTACA +
Preference number: 4 (lower is better)
Translates to: PQIHMGVTISTPSCICGWSSTAA*LTGSGT
Trigger: TGTACCAGACCCTGTCAGCCAAGCTGCTGTGGAAGA...CCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000535268.5
CDS-3UTR CCA 90 bp GGACTGCTATGCATGACCTTGGAGCACTCCATTTGTTCATCCCACGAGCCGGACTCTTCCACAGCAGCTTaGCTGACAGGGTCTGGTACA +
Preference number: 4 (lower is better)
Translates to: GLLCMTLEHSICSSHEPDSSTAA*LTGSGT
Trigger: TGTACCAGACCCTGTCAGCCAAGCTGCTGTGGAAGA...GTCCGGCTCGTGGGATGAACAAATGGAGTGCTCCAAGGTCATGCATAGCAGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433183.2
CDS-3UTR CCA 90 bp CTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACAGGTGGGCCCAGGCGGCTGTCGGTTaGCGCTACGCCCTCCTCGTG +
Preference number: 4 (lower is better)
Translates to: LGERPFSTKLSALMNRWAQAAVG*RYALLV
Trigger: CACGAGGAGGGCGTAGCGCCAACCGACAGCCGCCTG...GGCCCACCTGTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGCGCTCAGAAGATGTTaGGGCACATATGCCAGTCTT +
Preference number: 4 (lower is better)
Translates to: LERTQVSPSSFQGGSPKKALRRC*GTYASL
Trigger: AAGACTGGCATATGTGCCCCAACATCTTCTGAGCGC...TTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp TCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGAGCTCCTATTTGTTGCAAGGGTaGCGCTCAGAAGATGTTGGG +
Preference number: 4 (lower is better)
Translates to: STWGLPSVPPPASVDGSSYLLQG*RSEDVG
Trigger: CCCAACATCTTCTGAGCGCCACCCTTGCAACAAATA...GGAGCTCCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACGATTTGCGCAGCCCATaGCCCGGGCCAGCCGGCCTG +
Preference number: 4 (lower is better)
Translates to: GNGLGERPFSTKLSALMNDLRSP*PGPAGL
Trigger: CAGGCCGGCTGGCCCGGGCCATGGGCTGCGCAAATC...GTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp TGTGGCAAGAAAGCACACTTGGAAAGCTGTCTGCTAAGTGCGGTACTAAAAATAGATTTGCGCAGCCCATaGCCCGGGCCAGCCGGCCTG +
Preference number: 4 (lower is better)
Translates to: CGKKAHLESCLLSAVLKIDLRSP*PGPAGL
Trigger: CAGGCCGGCTGGCCCGGGCCATGGGCTGCGCAAATC...TATTTTTAGTACCGCACTTAGCAGACAGCTTTCCAAGTGTGCTTTCTTGCCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGTTCCGGTAGGGCCCAGGTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCACTAAACATCATGGCTaGAAAGAAATGGAGATCATT +
Preference number: 4 (lower is better)
Translates to: GSGRAQVHNEGARVTRRTTKHHG*KEMEII
Trigger: AATGATCTCCATTTCTTTCCAGCCATGATGTTTAGT...GGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGACCTGGGCCCTACCGGAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAGCCAGGACACTTTTGTaGCAAGAAAGCACACTTGGA +
Preference number: 4 (lower is better)
Translates to: PGQPFLLPRWESQESVGRARTLL*QESTLG
Trigger: TCCAAGTGTGCTTTCTTGCCACAAAAGTGTCCTGGC...TCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGAAGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATGTGCTCTGCTGGGCTaGGGCAGCCCCCTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: GRAGNGLGERPFSTKLSACALLG*GSPLLF
Trigger: AAACAGAAGGGGGCTGCCCCAGCCCAGCAGAGCACA...TGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAATCCTGCATCTGTGGATaGGAGCTCCAGAAACTCTGT +
Preference number: 4 (lower is better)
Translates to: QVSPSSFQGGSPKKVWGESCICG*ELQKLC
Trigger: ACAGAGTTTCTGGAGCTCCCATCCACAGATGCAGGA...TTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGCCCTCAAATCCACATaGGGGTTACCATCAGTACCC +
Preference number: 4 (lower is better)
Translates to: PQIHMGVTISTPSCICGWALKST*GLPSVP
Trigger: GGGTACTGATGGTAACCCCCATGTGGATTTGAGGGC...CCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGAAGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCAGGGATTCTGAGGGGCTaGGTCAGTGGCCATGGTGGT +
Preference number: 4 (lower is better)
Translates to: GRAGNGLGERPFSTKLSAGILRG*VSGHGG
Trigger: ACCACCATGGCCACTGACCCAGCCCCTCAGAATCCC...TGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAAGGACTAAACTGAAATaGAAAGGATTGGAGTGTGGG +
Preference number: 4 (lower is better)
Translates to: GAGENPGQPFLLPRWESQRTKLK*KGLECG
Trigger: CCCACACTCCAATCCTTTCCATTTCAGTTTAGTCCT...TTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CTGCCTTCACACTGGGATGTCGGCTGCATAATACTGTTCTCTGCCCATGTGTGGTTCTCTGCCCATGTGTaGACTGAACCCTCCCGACCT +
Preference number: 4 (lower is better)
Translates to: LPSHWDVGCIILFSAHVWFSAHV*TEPSRP
Trigger: AGGTCGGGAGGGTTCAGTCCACACATGGGCAGAGAA...CCACACATGGGCAGAGAACAGTATTATGCAGCCGACATCCCAGTGTGAAGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433183.2
CDS-3UTR CCA 90 bp GGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAAACAGGCTGGAATGCAGTaGCGTGATCTTGGTTCACTG +
Preference number: 4 (lower is better)
Translates to: GQPFLLPRWESQESVGRKQAGMQ*RDLGSL
Trigger: CAGTGAACCAAGATCACGCCACTGCATTCCAGCCTG...TTTTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438716.3
3UTR CAA 72 bp GCCTGTATTTGTTGCAAGGGTGGCGCTCAGAAGATGTaGGGGCACATATGCCAGTCTTGCTTCTCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: ACICCKGGAQKM*GHICQSCFSLA
Trigger: GGCCAAGGAGAAGCAAGACTGGCATATGTGCCCCAACATCTTCTGAGCGCCACCCTTGCAACAAATACAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452656.5
CDS-3UTR TCA 90 bp GGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAAACCAGAGTCATCTGAATaGGTGTTCATCACGCGGACA +
Preference number: 4 (lower is better)
Translates to: GQPFLLPRWESQESVGRKPESSE*VFITRT
Trigger: TGTCCGCGTGATGAACACTCATTCAGATGACTCTGG...TTTTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000438716.3
CDS-3UTR TCA 90 bp GGAAGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATGGACAGGGGCTCATTaGAGTTCACCGGCATGGGGA +
Preference number: 4 (lower is better)
Translates to: GRAGNGLGERPFSTKLSAWTGAH*SSPAWG
Trigger: TCCCCATGCCGGTGAACTTCAATGAGCCCCTGTCCA...TGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp CTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACAGGTGGGCCCCCCCAGCATGGGGTTaGAGGGCTTGGCGATGCGGT +
Preference number: 4 (lower is better)
Translates to: LGERPFSTKLSALMNRWAPPAWG*RAWRCG
Trigger: ACCGCATCGCCAAGCCCTTCAACCCCATGCTGGGGG...GGCCCACCTGTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAG
53% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp CCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGATGTTGTGAACAGTTaGGGTGCTCTTCCTCCACAC +
Preference number: 4 (lower is better)
Translates to: PQIHMGVTISTPSCICGWDVVNS*GALPPH
Trigger: GTGTGGAGGAAGAGCACCTCAACTGTTCACAACATC...CCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp CTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGGATGTTGTGAACAGTTaGGGTGCTCTTCCTCCACAC +
Preference number: 4 (lower is better)
Translates to: LKSTWGLPSVPPPASVDGDVVNS*GALPPH
Trigger: GTGTGGAGGAAGAGCACCTCAACTGTTCACAACATC...CCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp AGCGGGTACTTCTTCCACAGCAGCTTGGCTGACAGGGTCTGGTACACTGTCTTCTGGGACTGCTATGCATaGCCTTGGAGCACTCCATTT +
Preference number: 4 (lower is better)
Translates to: SGYFFHSSLADRVWYTVFWDCYA*PWSTPF
Trigger: AAATGGAGTGCTCCAAGGTCATGCATAGCAGTCCCA...GAAGACAGTGTACCAGACCCTGTCAGCCAAGCTGCTGTGGAAGAAGTACCCGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433183.2
CDS-3UTR TCA 90 bp CTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACAGGTGGGCCCCTCCTCGTGCTCGTTaGGGGTCAGGGCCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: LGERPFSTKLSALMNRWAPPRAR*GSGPAL
Trigger: CAGAGCTGGCCCTGACCCTCAACGAGCACGAGGAGG...GGCCCACCTGTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp TGTGCAGGCGCCTGTATTTGTTGCAAGGGTGGCGCTCAGAAGATGTTGGGGCACAGCGGTCTGGCTTCCTaGTGTCTTAAAAATAAGGGG +
Preference number: 4 (lower is better)
Translates to: CAGACICCKGGAQKMLGHSGLAS*CLKNKG
Trigger: CCCCTTATTTTTAAGACATCAGGAAGCCAGACCGCT...GTGCCCCAACATCTTCTGAGCGCCACCCTTGCAACAAATACAGGCGCCTGCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452656.5
CDS-3UTR TCA 90 bp GGAAGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCAAGGGCACAGCTCACATaGGGGCCAAACTCAGACAGG +
Preference number: 4 (lower is better)
Translates to: GRAGNGLGERPFSTKLSARAQLT*GPNSDR
Trigger: CCTGTCTGAGTTTGGCCCTCATGTGAGCTGTGCCCT...TGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp AGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAGCGGTGATCCACTGCTaGCGGTCCACCTCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: RAGNGLGERPFSTKLSALAVIHC*RSTSEL
Trigger: CAGCTCAGAGGTGGACCGGCAGCAGTGGATCACCGC...TAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000438716.3
CDS-3UTR GCA 90 bp GGAAGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATGGAGTGCAGCGCCGTaGTTGGCGATGAGGTCATTG +
Preference number: 4 (lower is better)
Translates to: GRAGNGLGERPFSTKLSAWSAAP*LAMRSL
Trigger: CAATGACCTCATCGCCAAGCACGGCGCTGCACTCCA...TGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000437268.6
ENST00000438716.3
CDS-3UTR GCA 90 bp GTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAAAATACTGCAGTGCCCGCTaGCATTTCCGACTGTGTATC +
Preference number: 4 (lower is better)
Translates to: VSPSSFQGGSPKKVWGEKYCSAR*HFRLCI
Trigger: GATACACAGTCGGAAATGGCAGCGGGCACTGCAGTA...TTTTTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp CAAGGGTGGCGCTCAGAAGATGTTGGGGCACATATGCCAGTCTTGCTTCTCCTTTACTGCAGTGCCCGCTaGCATTTCCGACTGTGTATC +
Preference number: 4 (lower is better)
Translates to: QGWRSEDVGAHMPVLLLLYCSAR*HFRLCI
Trigger: GATACACAGTCGGAAATGGCAGCGGGCACTGCAGTA...AAGGAGAAGCAAGACTGGCATATGTGCCCCAACATCTTCTGAGCGCCACCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452656.5
CDS-3UTR GCA 90 bp GGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAAATACCTTCAGCTTTTCTaGTGTCTTCCTTGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: GQPFLLPRWESQESVGRKYLQLF*CLPWPR
Trigger: CCGAGGCCAAGGAAGACAGCAGAAAAGCTGAAGGTA...TTTTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000332585.11
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
CDS-3UTR GCA 90 bp GTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAAAATGTCACCTTCCGGGCTaGCTCTTTGGAGAAGTAGCT +
Preference number: 4 (lower is better)
Translates to: VSPSSFQGGSPKKVWGEKCHLPG*LFGEVA
Trigger: AGCTACTTCTCCAAAGAGGCAGCCCGGAAGGTGACA...TTTTTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000535268.5
CDS-3UTR GCA 90 bp CTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACAGGTGGGCCGCTACGCCCTCCTCGTaGTCGTTGAGGGTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: LGERPFSTKLSALMNRWAATPSS*SLRVRA
Trigger: GGCCCTGACCCTCAACGAGCACGAGGAGGGCGTAGC...GGCCCACCTGTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp TGTGGCAAGAAAGCACACTTGGAAAGCTGTCTGCTAAGTGCGGTACTAAAAATATCTCTTCCTCCGAGCTaGAGCTGCTGCCCGGCCCGC +
Preference number: 4 (lower is better)
Translates to: CGKKAHLESCLLSAVLKISLPPS*SCCPAR
Trigger: GCGGGCCGGGCAGCAGCTGCAGCTCGGAGGAAGAGA...TATTTTTAGTACCGCACTTAGCAGACAGCTTTCCAAGTGTGCTTTCTTGCCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp CTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAATGTTGGGGCACATATaGCAGTCTTGCTTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: LERTQVSPSSFQGGSPKKMLGHI*QSCFSL
Trigger: CAAGGAGAAGCAAGACTGGCATATGTGCCCCAACAT...TTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp CAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAATGTTGGGGCACATATaGCAGTCTTGCTTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: QVSPSSFQGGSPKKVWGEMLGHI*QSCFSL
Trigger: CAAGGAGAAGCAAGACTGGCATATGTGCCCCAACAT...TTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GGAAGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCAGGTGAGGCCAGGGACTaGTGCCCTCAAATCCACATG +
Preference number: 4 (lower is better)
Translates to: GRAGNGLGERPFSTKLSAGEARD*CPQIHM
Trigger: CATGTGGATTTGAGGGCAGCAGTCCCTGGCCTCACC...TGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp CCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGACCAAACTCAGACAGGTaGACCCGTCTTCATCATTTT +
Preference number: 4 (lower is better)
Translates to: PGQPFLLPRWESQESVGRPNSDR*TRLHHF
Trigger: AAAATGATGAAGACGGGTGCACCTGTCTGAGTTTGG...TCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GCCTTCACACTGGGATGTCGGCTGCATAATACTGTTCTCTGCCCATGTGTGGACCCTGTGCCTGTCAGTTaGTTTCTGTCCACTGTCCTC +
Preference number: 4 (lower is better)
Translates to: AFTLGCRLHNTVLCPCVDPVPVS*FLSTVL
Trigger: GAGGACAGTGGACAGAAAGCAACTGACAGGCACAGG...GTCCACACATGGGCAGAGAACAGTATTATGCAGCCGACATCCCAGTGTGAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433183.2
CDS-3UTR GCA 90 bp TGTGGCAAGAAAGCACACTTGGAAAGCTGTCTGCTAAGTGCGGTACTAAAAATAGGTCTCCTCTGCTGCTaGCGGCCTTCTCCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: CGKKAHLESCLLSAVLKIGLLCC*RPSPGP
Trigger: GGGGCCTGGAGAAGGCCGGCAGCAGCAGAGGAGACC...TATTTTTAGTACCGCACTTAGCAGACAGCTTTCCAAGTGTGCTTTCTTGCCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000431368.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCATGTGGAGTCTTCCATaGCATCAAAGTACTCGGTAT +
Preference number: 4 (lower is better)
Translates to: ARDCCPQIHMGVTISTPSMWSLP*HQSTRY
Trigger: ATACCGAGTACTTTGATGCCATGGAAGACTCCACAT...GGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACCCGGCATGGGGATCCTaGAGAGCTCCCGGCCGATGC +
Preference number: 4 (lower is better)
Translates to: GNGLGERPFSTKLSALMNPAWGS*RAPGRC
Trigger: GCATCGGCCGGGAGCTCTCCAGGATCCCCATGCCGG...GTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp TACCATCGAGGACTTGATATGTTGAGCTACAAAATTCTCCCAACTCAAAGCGGTCCGGCATGGGGATCCTaGAGAGCTCCCGGCCGATGC +
Preference number: 4 (lower is better)
Translates to: YHRGLDMLSYKILPTQSGPAWGS*RAPGRC
Trigger: GCATCGGCCGGGAGCTCTCCAGGATCCCCATGCCGG...ACCGCTTTGAGTTGGGAGAATTTTGTAGCTCAACATATCAAGTCCTCGATGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CAAGGGTGGCGCTCAGAAGATGTTGGGGCACATATGCCAGTCTTGCTTCTCCTTGCCTGGAATTCTAAGTaGATGGCACCTAGCGGCATG +
Preference number: 4 (lower is better)
Translates to: QGWRSEDVGAHMPVLLLLAWNSK*MAPSGM
Trigger: CATGCCGCTAGGTGCCATCCACTTAGAATTCCAGGC...AAGGAGAAGCAAGACTGGCATATGTGCCCCAACATCTTCTGAGCGCCACCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452656.5
CDS-3UTR CCA 90 bp CTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAACGTAGTGATTCCCACTaGCCTGGAATTCTAAGTGGA +
Preference number: 4 (lower is better)
Translates to: LERTQVSPSSFQGGSPKKRSDSH*PGILSG
Trigger: TCCACTTAGAATTCCAGGCCAGTGGGAATCACTACG...TTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAACGTAGTGATTCCCACTaGCCTGGAATTCTAAGTGGA +
Preference number: 4 (lower is better)
Translates to: QVSPSSFQGGSPKKVWGERSDSH*PGILSG
Trigger: TCCACTTAGAATTCCAGGCCAGTGGGAATCACTACG...TTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGACGGTCATTGGTCTTATaGTTCACAATCTCGATGTCC +
Preference number: 4 (lower is better)
Translates to: PGQPFLLPRWESQESVGRRSLVL*FTISMS
Trigger: GGACATCGAGATTGTGAACCATAAGACCAATGACCG...TCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAGCTGGCACCGGTCATTaGTCTTATGGTTCACAATCT +
Preference number: 4 (lower is better)
Translates to: QVSPSSFQGGSPKKVWGEAGTGH*SYGSQS
Trigger: AGATTGTGAACCATAAGACCAATGACCGGTGCCAGC...TTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp TGGAGCACTCCATTTGTTCATCCCACGAGCCGGACAGCACGTAATGGGCCTTGCGCTGGCACCGGTCATTaGTCTTATGGTTCACAATCT +
Preference number: 4 (lower is better)
Translates to: WSTPFVHPTSRTARNGPCAGTGH*SYGSQS
Trigger: AGATTGTGAACCATAAGACCAATGACCGGTGCCAGC...GCAAGGCCCATTACGTGCTGTCCGGCTCGTGGGATGAACAAATGGAGTGCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433183.2
CDS-3UTR CCA 90 bp CCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGTTGGCTGACAGGGTCTaGTACACTGTCTTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: PQIHMGVTISTPSCICGWLADRV*YTVFCF
Trigger: GAAGCAGAAGACAGTGTACCAGACCCTGTCAGCCAA...CCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000535268.5
CDS-3UTR CCA 90 bp GTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAAAATCTTCCACAGCAGCTTaGCTGACAGGGTCTGGTACA +
Preference number: 4 (lower is better)
Translates to: VSPSSFQGGSPKKVWGEKSSTAA*LTGSGT
Trigger: TGTACCAGACCCTGTCAGCCAAGCTGCTGTGGAAGA...TTTTTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000535268.5
CDS-3UTR CCA 90 bp TGTGGCAAGAAAGCACACTTGGAAAGCTGTCTGCTAAGTGCGGTACTAAAAATACAGGCGGCTGTCGGTTaGCGCTACGCCCTCCTCGTG +
Preference number: 4 (lower is better)
Translates to: CGKKAHLESCLLSAVLKIQAAVG*RYALLV
Trigger: CACGAGGAGGGCGTAGCGCCAACCGACAGCCGCCTG...TATTTTTAGTACCGCACTTAGCAGACAGCTTTCCAAGTGTGCTTTCTTGCCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACCAGGCGGCTGTCGGTTaGCGCTACGCCCTCCTCGTG +
Preference number: 4 (lower is better)
Translates to: GNGLGERPFSTKLSALMNQAAVG*RYALLV
Trigger: CACGAGGAGGGCGTAGCGCCAACCGACAGCCGCCTG...GTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACTTCTCCATCAGCCGCTaGTCGGGCCGCAGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: GNGLGERPFSTKLSALMNFSISR*SGRRRL
Trigger: CAGCCGCCTGCGGCCCGACCAGCGGCTGATGGAGAA...GTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAATATTTGTTGCAAGGGTaGCGCTCAGAAGATGTTGGG +
Preference number: 4 (lower is better)
Translates to: QVSPSSFQGGSPKKVWGEYLLQG*RSEDVG
Trigger: CCCAACATCTTCTGAGCGCCACCCTTGCAACAAATA...TTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CAAGGGTGGCGCTCAGAAGATGTTGGGGCACATATGCCAGTCTTGCTTCTCCTTGGAAATAGGAAGGGCTaGGAATGGGCTGGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: QGWRSEDVGAHMPVLLLLGNRKG*EWAGRK
Trigger: CTTTCTCCCAGCCCATTCCCAGCCCTTCCTATTTCC...AAGGAGAAGCAAGACTGGCATATGTGCCCCAACATCTTCTGAGCGCCACCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452656.5
CDS-3UTR CCA 90 bp CTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGTTCCTCCTTCCAAGGTaGGAGTCCCAAGAAAGTGTG +
Preference number: 4 (lower is better)
Translates to: LKSTWGLPSVPPPASVDGFLLPR*ESQESV
Trigger: CACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAA...CCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp TGTGGCAAGAAAGCACACTTGGAAAGCTGTCTGCTAAGTGCGGTACTAAAAATAGGCGCACCTGGGGGCTaGAGAGAACCCAGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: CGKKAHLESCLLSAVLKIGAPGG*REPRSA
Trigger: GGCTGACCTGGGTTCTCTCCAGCCCCCAGGTGCGCC...TATTTTTAGTACCGCACTTAGCAGACAGCTTTCCAAGTGTGCTTTCTTGCCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACGGCGCACCTGGGGGCTaGAGAGAACCCAGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: GNGLGERPFSTKLSALMNGAPGG*REPRSA
Trigger: GGCTGACCTGGGTTCTCTCCAGCCCCCAGGTGCGCC...GTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp TACCATCGAGGACTTGATATGTTGAGCTACAAAATTCTCCCAACTCAAAGCGGTGGCGCACCTGGGGGCTaGAGAGAACCCAGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: YHRGLDMLSYKILPTQSGGAPGG*REPRSA
Trigger: GGCTGACCTGGGTTCTCTCCAGCCCCCAGGTGCGCC...ACCGCTTTGAGTTGGGAGAATTTTGTAGCTCAACATATCAAGTCCTCGATGGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGAAGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCACTGAGTTGTGGTAACTaGGGCAGGGGTTCCGGTAGG +
Preference number: 4 (lower is better)
Translates to: GRAGNGLGERPFSTKLSALSCGN*GRGSGR
Trigger: CCTACCGGAACCCCTGCCCCAGTTACCACAACTCAG...TGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGCAACTCAAAGCGGTCTaGCTTCCTGATGTCTTAAAA +
Preference number: 4 (lower is better)
Translates to: PRSALPPSKVGVPRKCGEQLKAV*LPDVLK
Trigger: TTTTAAGACATCAGGAAGCCAGACCGCTTTGAGTTG...CTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp TCACACTGGGATGTCGGCTGCATAATACTGTTCTCTGCCCATGTGTGGACTGAAGTCACCTGTGGACATTaGCAGGACCAGCGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: SHWDVGCIILFSAHVWTEVTCGH*QDQRRC
Trigger: GCACCTACGCTGGTCCTGCCAATGTCCACAGGTGAC...TTCAGTCCACACATGGGCAGAGAACAGTATTATGCAGCCGACATCCCAGTGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433183.2
CDS-3UTR TCA 90 bp GGAAGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCAAGAGGCTTCCCTCAATaGAGCTCTTGGAGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: GRAGNGLGERPFSTKLSARGFPQ*SSWRGW
Trigger: CCAACCCCTCCAAGAGCTTCATTGAGGGAAGCCTCT...TGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp GGAAGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCACCTCTTGACTTTGGATaGACCCTTGGGCACGAGCGA +
Preference number: 4 (lower is better)
Translates to: GRAGNGLGERPFSTKLSAPLDFG*TLGHER
Trigger: TCGCTCGTGCCCAAGGGTTCATCCAAAGTCAAGAGG...TGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp GGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACCCCCCAGCATGGGGTTaGAGGGCTTGGCGATGCGGT +
Preference number: 4 (lower is better)
Translates to: GNGLGERPFSTKLSALMNPPAWG*RAWRCG
Trigger: ACCGCATCGCCAAGCCCTTCAACCCCATGCTGGGGG...GTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp GTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAAAAGATGTTGTGAACAGTTaGGGTGCTCTTCCTCCACAC +
Preference number: 4 (lower is better)
Translates to: VSPSSFQGGSPKKVWGEKDVVNS*GALPPH
Trigger: GTGTGGAGGAAGAGCACCTCAACTGTTCACAACATC...TTTTTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp GTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAAAAAGAGCTTGCCCACGATaGTGTTGTGAACAGTTGAGG +
Preference number: 4 (lower is better)
Translates to: VSPSSFQGGSPKKVWGEKRACPR*CCEQLR
Trigger: CCTCAACTGTTCACAACATCATCGTGGGCAAGCTCT...TTTTTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGAC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp TGTGGCAAGAAAGCACACTTGGAAAGCTGTCTGCTAAGTGCGGTACTAAAAATACCTCCTCGTGCTCGTTaGGGGTCAGGGCCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: CGKKAHLESCLLSAVLKIPPRAR*GSGPAL
Trigger: CAGAGCTGGCCCTGACCCTCAACGAGCACGAGGAGG...TATTTTTAGTACCGCACTTAGCAGACAGCTTTCCAAGTGTGCTTTCTTGCCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp TACCATCGAGGACTTGATATGTTGAGCTACAAAATTCTCCCAACTCAAAGCGGTTGGGTTGGGGGCTGGTaGTTTGCGCAGCCCATGGCC +
Preference number: 4 (lower is better)
Translates to: YHRGLDMLSYKILPTQSGWVGGW*FAQPMA
Trigger: GGCCATGGGCTGCGCAAATCACCAGCCCCCAACCCA...ACCGCTTTGAGTTGGGAGAATTTTGTAGCTCAACATATCAAGTCCTCGATGGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp CCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGGAGGACTTGATATGTTaGGCTACAAAATTCTCCCAA +
Preference number: 4 (lower is better)
Translates to: PRSALPPSKVGVPRKCGEEDLIC*ATKFSQ
Trigger: TTGGGAGAATTTTGTAGCTCAACATATCAAGTCCTC...CTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GGAAGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCAATGGTTTCCTCCAAGTaGACGCGCTGCTCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: GRAGNGLGERPFSTKLSAMVSSK*TRCSCS
Trigger: TGAGCAGGAGCAGCGCGTGCACTTGGAGGAAACCAT...TGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GGAAGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATCGAGGCTGTTGTGCTaGTTCGCCAGCTGCTCAATG +
Preference number: 4 (lower is better)
Translates to: GRAGNGLGERPFSTKLSASRLLC*FASCSM
Trigger: CATTGAGCAGCTGGCGAAGCAGCACAACAGCCTCGA...TGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp AGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTACGCTCGAGGCTGTTGTaGTGCTTCGCCAGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: RAGNGLGERPFSTKLSALRSRLL*CFASCS
Trigger: TGAGCAGCTGGCGAAGCAGCACAACAGCCTCGAGCG...TAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GGAAGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATGGTACACTGTCTTCTaGTTCCCGTCAGAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: GRAGNGLGERPFSTKLSAWYTVF*FPSELG
Trigger: CCCCAGCTCTGACGGGAAGCAGAAGACAGTGTACCA...TGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000535268.5
CDS-3UTR GCA 90 bp CTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGATGTTGGGGCACATATaGCAGTCTTGCTTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: LKSTWGLPSVPPPASVDGMLGHI*QSCFSL
Trigger: CAAGGAGAAGCAAGACTGGCATATGTGCCCCAACAT...CCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAAAACGGAACTTGTCCCGGTaGTACCTTCAGCTTTTCTGT +
Preference number: 4 (lower is better)
Translates to: VSPSSFQGGSPKKVWGEKRNLSR*YLQLFC
Trigger: ACAGAAAAGCTGAAGGTAGCACCGGGACAAGTTCCG...TTTTTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000401475.5
ENST00000403222.7
ENST00000438716.3
ENST00000535268.5
CDS-3UTR CCA 90 bp GGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACCTGCAGCAGTTCCGATaGCTGCCCAGCCCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: GNGLGERPFSTKLSALMNLQQFR*LPSPWL
Trigger: GAGCCAGGGGCTGGGCAGCCATCGGAACTGCTGCAG...GTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332585.11
CDS-3UTR CCA 90 bp CTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACAGGTGGGCCTCTGTCAGGGAGCGCTaGAGTGCAGCGCCGTGCTTG +
Preference number: 4 (lower is better)
Translates to: LGERPFSTKLSALMNRWASVRER*SAAPCL
Trigger: CAAGCACGGCGCTGCACTCCAGCGCTCCCTGACAGA...GGCCCACCTGTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000437268.6
ENST00000438716.3
CDS-3UTR CCA 90 bp CCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAATGTGGAGTCTTCCATaGCATCAAAGTACTCGGTAT +
Preference number: 4 (lower is better)
Translates to: PGQPFLLPRWESQESVGRMWSLP*HQSTRY
Trigger: ATACCGAGTACTTTGATGCCATGGAAGACTCCACAT...TCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp TCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGAGCTCCATGTGGAGTCTTCCATaGCATCAAAGTACTCGGTAT +
Preference number: 4 (lower is better)
Translates to: STWGLPSVPPPASVDGSSMWSLP*HQSTRY
Trigger: ATACCGAGTACTTTGATGCCATGGAAGACTCCACAT...GGAGCTCCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGAAGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTGTCCAGCAGGTGGTaGTACTCCAGGTCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: GRAGNGLGERPFSTKLSALSSRW*YSRSSV
Trigger: GACAGAGGACCTGGAGTACCACCACCTGCTGGACAA...TGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGCTGGCACCGGTCATTaGTCTTATGGTTCACAATCT +
Preference number: 4 (lower is better)
Translates to: PQIHMGVTISTPSCICGWAGTGH*SYGSQS
Trigger: AGATTGTGAACCATAAGACCAATGACCGGTGCCAGC...CCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAAATATTTGTTGCAAGGGTaGCGCTCAGAAGATGTTGGG +
Preference number: 4 (lower is better)
Translates to: GQPFLLPRWESQESVGRKYLLQG*RSEDVG
Trigger: CCCAACATCTTCTGAGCGCCACCCTTGCAACAAATA...TTTTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGTATTTGTTGCAAGGGTaGCGCTCAGAAGATGTTGGG +
Preference number: 4 (lower is better)
Translates to: LKSTWGLPSVPPPASVDGYLLQG*RSEDVG
Trigger: CCCAACATCTTCTGAGCGCCACCCTTGCAACAAATA...CCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp TGGGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCACTAAACATCATGGCTaGAAAGAAATGGAGATCATT +
Preference number: 4 (lower is better)
Translates to: WGLERTQVSPSSFQGGSPTKHHG*KEMEII
Trigger: AATGATCTCCATTTCTTTCCAGCCATGATGTTTAGT...GGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGCCAGGACACTTTTGTaGCAAGAAAGCACACTTGGA +
Preference number: 4 (lower is better)
Translates to: PQIHMGVTISTPSCICGWARTLL*QESTLG
Trigger: TCCAAGTGTGCTTTCTTGCCACAAAAGTGTCCTGGC...CCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAAAATCCTGCATCTGTGGATaGGAGCTCCAGAAACTCTGT +
Preference number: 4 (lower is better)
Translates to: VSPSSFQGGSPKKVWGEKSCICG*ELQKLC
Trigger: ACAGAGTTTCTGGAGCTCCCATCCACAGATGCAGGA...TTTTTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp TCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGAGCTCCCTAACAAAACAGTGTTaGGGAGAGGTACATTCCACA +
Preference number: 4 (lower is better)
Translates to: STWGLPSVPPPASVDGSSLTKQC*GEVHST
Trigger: TGTGGAATGTACCTCTCCCCAACACTGTTTTGTTAG...GGAGCTCCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000437268.6
ENST00000535268.5
CDS-3UTR TCA 90 bp CTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACAGGTGGGCCATCCTGACTCGGGTCTaGGAAAGGTCGCGCTCCCCA +
Preference number: 4 (lower is better)
Translates to: LGERPFSTKLSALMNRWAILTRV*ERSRSP
Trigger: TGGGGAGCGCGACCTTTCTCAGACCCGAGTCAGGAT...GGCCCACCTGTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332585.11
CDS-3UTR GCA 90 bp GGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACTGCACGCGCTGCTCCTaGTCATACTGCAGTGCCCGC +
Preference number: 4 (lower is better)
Translates to: GNGLGERPFSTKLSALMNCTRCS*SYCSAR
Trigger: GCGGGCACTGCAGTATGAGCAGGAGCAGCGCGTGCA...GTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp CTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACAGGTGGGCCCGCTCGAGGCTGTTGTaGTGCTTCGCCAGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: LGERPFSTKLSALMNRWARSRLL*CFASCS
Trigger: TGAGCAGCTGGCGAAGCAGCACAACAGCCTCGAGCG...GGCCCACCTGTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GGAAGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCACGGAACTTGTCCCGGTaGTACCTTCAGCTTTTCTGC +
Preference number: 4 (lower is better)
Translates to: GRAGNGLGERPFSTKLSARNLSR*YLQLFC
Trigger: GCAGAAAAGCTGAAGGTAGCACCGGGACAAGTTCCG...TGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332585.11
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
CDS-3UTR GCA 90 bp GTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAAAATGTGAACAGTTGAGGTaGTCTTCCTCCACACGTAGT +
Preference number: 4 (lower is better)
Translates to: VSPSSFQGGSPKKVWGEKCEQLR*SSSTRS
Trigger: ACTACGTGTGGAGGAAGAGCACCTCAACTGTTCACA...TTTTTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GATGTCGGCTGCATAATACTGTTCTCTGCCCATGTGTGGACTGAACCCTCCCGATGTGAACAGTTGAGGTaGTCTTCCTCCACACGTAGT +
Preference number: 4 (lower is better)
Translates to: DVGCIILFSAHVWTEPSRCEQLR*SSSTRS
Trigger: ACTACGTGTGGAGGAAGAGCACCTCAACTGTTCACA...TCGGGAGGGTTCAGTCCACACATGGGCAGAGAACAGTATTATGCAGCCGACATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433183.2
CDS-3UTR GCA 90 bp AGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAGCACGTAATGGGCCTTaGCCTGGCTGTCACTCACCA +
Preference number: 4 (lower is better)
Translates to: RAGNGLGERPFSTKLSALARNGP*PGCHSP
Trigger: TGGTGAGTGACAGCCAGGGCAAGGCCCATTACGTGC...TAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000535268.5
CDS-3UTR GCA 90 bp AGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAAGGTGGGCCAGGCTGTaGAGGCGCCTGTATTTGTTG +
Preference number: 4 (lower is better)
Translates to: RAGNGLGERPFSTKLSALRWARL*RRLYLL
Trigger: CAACAAATACAGGCGCCTGCACAGCCTGGCCCACCT...TAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp AGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAGGTGAGGCCAGGGACTaGTGCCCTCAAATCCACATG +
Preference number: 4 (lower is better)
Translates to: RAGNGLGERPFSTKLSALGEARD*CPQIHM
Trigger: CATGTGGATTTGAGGGCAGCAGTCCCTGGCCTCACC...TAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp CTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACAGGTGGGCCATGCAAGGTCTCTGGTaGCCAGGTCACCAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: LGERPFSTKLSALMNRWAMQGLW*PGHQPR
Trigger: CCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCAT...GGCCCACCTGTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAAACCAAACTCAGACAGGTaGACCCGTCTTCATCATTTT +
Preference number: 4 (lower is better)
Translates to: GQPFLLPRWESQESVGRKPNSDR*TRLHHF
Trigger: AAAATGATGAAGACGGGTGCACCTGTCTGAGTTTGG...TTTTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp TGTGGCAAGAAAGCACACTTGGAAAGCTGTCTGCTAAGTGCGGTACTAAAAATATCTGTCAGGGAGCGCTaGAGTGCAGCGCCGTGCTTG +
Preference number: 4 (lower is better)
Translates to: CGKKAHLESCLLSAVLKISVRER*SAAPCL
Trigger: CAAGCACGGCGCTGCACTCCAGCGCTCCCTGACAGA...TATTTTTAGTACCGCACTTAGCAGACAGCTTTCCAAGTGTGCTTTCTTGCCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000437268.6
CDS-3UTR CCA 90 bp CTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAATGTGGAGTCTTCCATaGCATCAAAGTACTCGGTAT +
Preference number: 4 (lower is better)
Translates to: LERTQVSPSSFQGGSPKKMWSLP*HQSTRY
Trigger: ATACCGAGTACTTTGATGCCATGGAAGACTCCACAT...TTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAAACGGTCATTGGTCTTATaGTTCACAATCTCGATGTCC +
Preference number: 4 (lower is better)
Translates to: GQPFLLPRWESQESVGRKRSLVL*FTISMS
Trigger: GGACATCGAGATTGTGAACCATAAGACCAATGACCG...TTTTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGCGGTCATTGGTCTTATaGTTCACAATCTCGATGTCC +
Preference number: 4 (lower is better)
Translates to: PQIHMGVTISTPSCICGWRSLVL*FTISMS
Trigger: GGACATCGAGATTGTGAACCATAAGACCAATGACCG...CCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGACTGCTATGCATGACCTTGGAGCACTCCATTTGTTCATCCCACGAGCCGGACCGGTCATTGGTCTTATaGTTCACAATCTCGATGTCC +
Preference number: 4 (lower is better)
Translates to: GLLCMTLEHSICSSHEPDRSLVL*FTISMS
Trigger: GGACATCGAGATTGTGAACCATAAGACCAATGACCG...GTCCGGCTCGTGGGATGAACAAATGGAGTGCTCCAAGGTCATGCATAGCAGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433183.2
CDS-3UTR CCA 90 bp CTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACAGGTGGGCCGCTTCCCGTCAGAGCTaGGGCTGCTGGGACTGCTAT +
Preference number: 4 (lower is better)
Translates to: LGERPFSTKLSALMNRWAASRQS*GCWDCY
Trigger: ATAGCAGTCCCAGCAGCCCCAGCTCTGACGGGAAGC...GGCCCACCTGTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000535268.5
CDS-3UTR CCA 90 bp GTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAAAATATTTGTTGCAAGGGTaGCGCTCAGAAGATGTTGGG +
Preference number: 4 (lower is better)
Translates to: VSPSSFQGGSPKKVWGEKYLLQG*RSEDVG
Trigger: CCCAACATCTTCTGAGCGCCACCCTTGCAACAAATA...TTTTTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAAAAGCCAGGACACTTTTGTaGCAAGAAAGCACACTTGGA +
Preference number: 4 (lower is better)
Translates to: VSPSSFQGGSPKKVWGEKARTLL*QESTLG
Trigger: TCCAAGTGTGCTTTCTTGCCACAAAAGTGTCCTGGC...TTTTTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAACAACTCAAAGCGGTCTaGCTTCCTGATGTCTTAAAA +
Preference number: 4 (lower is better)
Translates to: QVSPSSFQGGSPKKVWGEQLKAV*LPDVLK
Trigger: TTTTAAGACATCAGGAAGCCAGACCGCTTTGAGTTG...TTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGAAGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCAGCCCTCAAATCCACATaGGGGTTACCATCAGTACCC +
Preference number: 4 (lower is better)
Translates to: GRAGNGLGERPFSTKLSAALKST*GLPSVP
Trigger: GGGTACTGATGGTAACCCCCATGTGGATTTGAGGGC...TGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGAAGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATCATTATTGCTGATTTaGGGCCTGGGTCTCAGGGCG +
Preference number: 4 (lower is better)
Translates to: GRAGNGLGERPFSTKLSASLLLI*GLGLRA
Trigger: CGCCCTGAGACCCAGGCCCCAAATCAGCAATAATGA...TGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAAGGACTAAACTGAAATaGAAAGGATTGGAGTGTGGG +
Preference number: 4 (lower is better)
Translates to: LERTQVSPSSFQGGSPKKRTKLK*KGLECG
Trigger: CCCACACTCCAATCCTTTCCATTTCAGTTTAGTCCT...TTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CTGCCTTCACACTGGGATGTCGGCTGCATAATACTGTTCTCTGCCCATGTGTGGTGTCTGCCTTCACACTaGGATGTCGGCTGCATAATA +
Preference number: 4 (lower is better)
Translates to: LPSHWDVGCIILFSAHVWCLPSH*DVGCII
Trigger: TATTATGCAGCCGACATCCCAGTGTGAAGGCAGACA...CCACACATGGGCAGAGAACAGTATTATGCAGCCGACATCCCAGTGTGAAGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433183.2
CDS-3UTR TCA 90 bp AGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTATCTCAGATGGGATCTTaGGGCCGTCCAGCTCTGTCA +
Preference number: 4 (lower is better)
Translates to: RAGNGLGERPFSTKLSALSQMGS*GRPALS
Trigger: TGACAGAGCTGGACGGCCTCAAGATCCCATCTGAGA...TAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000437268.6
ENST00000438716.3
CDS-3UTR TCA 90 bp AGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTATGCGGACTCGCCTCTTaGCTTTGGATGAACCCTTGG +
Preference number: 4 (lower is better)
Translates to: RAGNGLGERPFSTKLSALCGLAS*LWMNPW
Trigger: CCAAGGGTTCATCCAAAGTCAAGAGGCGAGTCCGCA...TAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp CTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACAGGTGGGCCTGGACAGGGGCTCATTaGAGTTCACCGGCATGGGGA +
Preference number: 4 (lower is better)
Translates to: LGERPFSTKLSALMNRWAWTGAH*SSPAWG
Trigger: TCCCCATGCCGGTGAACTTCAATGAGCCCCTGTCCA...GGCCCACCTGTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp GGAAGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCACCCACGATGATGTTGTaGACAGTTGAGGTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: GRAGNGLGERPFSTKLSAPTMML*TVEVLF
Trigger: GAAGAGCACCTCAACTGTTCACAACATCATCGTGGG...TGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp CTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACAGGTGGGCCCCACAGCAGCTTGGCTaGCAGGGTCTGGTACACTGT +
Preference number: 4 (lower is better)
Translates to: LGERPFSTKLSALMNRWAPQQLG*QGLVHC
Trigger: ACAGTGTACCAGACCCTGTCAGCCAAGCTGCTGTGG...GGCCCACCTGTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000535268.5
CDS-3UTR TCA 90 bp AGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTATGGGCCATTTCACCCTaGTTTCTGTCTGTGGGTCGC +
Preference number: 4 (lower is better)
Translates to: RAGNGLGERPFSTKLSALWAISP*FLSVGR
Trigger: GCGACCCACAGACAGAAATCAGGGTGAAATGGCCCA...TAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403222.7
ENST00000407373.5
ENST00000438716.3
CDS-3UTR GCA 90 bp AGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTATTCCGATCTTGGCACTaGCTCCGAAACTGCCTCCGA +
Preference number: 4 (lower is better)
Translates to: RAGNGLGERPFSTKLSALFRSWH*LRNCLR
Trigger: TCGGAGGCAGTTTCGGAGGCAGTGCCAAGATCGGAA...TAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332585.11
CDS-3UTR GCA 90 bp CTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACAGGTGGGCCTGGAGTGCAGCGCCGTaGTTGGCGATGAGGTCATTG +
Preference number: 4 (lower is better)
Translates to: LGERPFSTKLSALMNRWAWSAAP*LAMRSL
Trigger: CAATGACCTCATCGCCAAGCACGGCGCTGCACTCCA...GGCCCACCTGTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000437268.6
ENST00000438716.3
CDS-3UTR GCA 90 bp AGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTACTGCTCATACTGCAGTaGCCGCTGCCATTTCCGACT +
Preference number: 4 (lower is better)
Translates to: RAGNGLGERPFSTKLSALLLILQ*PLPFPT
Trigger: AGTCGGAAATGGCAGCGGGCACTGCAGTATGAGCAG...TAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp AGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTATCCAAGTGCACGCGCTaGTCCTGCTCATACTGCAGT +
Preference number: 4 (lower is better)
Translates to: RAGNGLGERPFSTKLSALSKCTR*SCSYCS
Trigger: ACTGCAGTATGAGCAGGAGCAGCGCGTGCACTTGGA...TAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp AGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTATCGAGGCTGTTGTGCTaGTTCGCCAGCTGCTCAATG +
Preference number: 4 (lower is better)
Translates to: RAGNGLGERPFSTKLSALSRLLC*FASCSM
Trigger: CATTGAGCAGCTGGCGAAGCAGCACAACAGCCTCGA...TAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACCGCTCGAGGCTGTTGTaGTGCTTCGCCAGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: GNGLGERPFSTKLSALMNRSRLL*CFASCS
Trigger: TGAGCAGCTGGCGAAGCAGCACAACAGCCTCGAGCG...GTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp TGTGGCAAGAAAGCACACTTGGAAAGCTGTCTGCTAAGTGCGGTACTAAAAATACGCTCGAGGCTGTTGTaGTGCTTCGCCAGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: CGKKAHLESCLLSAVLKIRSRLL*CFASCS
Trigger: TGAGCAGCTGGCGAAGCAGCACAACAGCCTCGAGCG...TATTTTTAGTACCGCACTTAGCAGACAGCTTTCCAAGTGTGCTTTCTTGCCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp TGTGGCAAGAAAGCACACTTGGAAAGCTGTCTGCTAAGTGCGGTACTAAAAATAGCCACCAGGCACATCTaGTCCACTGAGCTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: CGKKAHLESCLLSAVLKIATRHI*STELVQ
Trigger: CTGCACCAGCTCAGTGGAGCAGATGTGCCTGGTGGC...TATTTTTAGTACCGCACTTAGCAGACAGCTTTCCAAGTGTGCTTTCTTGCCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp CTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACAGGTGGGCCGCACGTAATGGGCCTTaGCCTGGCTGTCACTCACCA +
Preference number: 4 (lower is better)
Translates to: LGERPFSTKLSALMNRWAARNGP*PGCHSP
Trigger: TGGTGAGTGACAGCCAGGGCAAGGCCCATTACGTGC...GGCCCACCTGTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000535268.5
CDS-3UTR GCA 90 bp AGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTACTGCTGGGACTGCTATaGATGACCTTGGAGCACTCC +
Preference number: 4 (lower is better)
Translates to: RAGNGLGERPFSTKLSALLLGLL*MTLEHS
Trigger: GGAGTGCTCCAAGGTCATGCATAGCAGTCCCAGCAG...TAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000535268.5
CDS-3UTR GCA 90 bp AGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTATGGTACACTGTCTTCTaGTTCCCGTCAGAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: RAGNGLGERPFSTKLSALWYTVF*FPSELG
Trigger: CCCCAGCTCTGACGGGAAGCAGAAGACAGTGTACCA...TAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000535268.5
CDS-3UTR GCA 90 bp CTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACAGGTGGGCCTTCTCCTCCAGCCGCTaGTTCTCGGTATTGGCCTCG +
Preference number: 4 (lower is better)
Translates to: LGERPFSTKLSALMNRWAFSSSR*FSVLAS
Trigger: CGAGGCCAATACCGAGAAGCAGCGGCTGGAGGAGAA...GGCCCACCTGTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp CTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACAGGTGGGCCAGGTGGGCCAGGCTGTaGAGGCGCCTGTATTTGTTG +
Preference number: 4 (lower is better)
Translates to: LGERPFSTKLSALMNRWARWARL*RRLYLL
Trigger: CAACAAATACAGGCGCCTGCACAGCCTGGCCCACCT...GGCCCACCTGTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp TACCATCGAGGACTTGATATGTTGAGCTACAAAATTCTCCCAACTCAAAGCGGTGCTCCAGAAACTCTGTaGTCTGCTGGGCTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: YHRGLDMLSYKILPTQSGAPETL*SAGLGQ
Trigger: CTGCCCCAGCCCAGCAGAGCACAGAGTTTCTGGAGC...ACCGCTTTGAGTTGGGAGAATTTTGTAGCTCAACATATCAAGTCCTCGATGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp TGTGGCAAGAAAGCACACTTGGAAAGCTGTCTGCTAAGTGCGGTACTAAAAATAGCTCCAGAAACTCTGTaGTCTGCTGGGCTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: CGKKAHLESCLLSAVLKIAPETL*SAGLGQ
Trigger: CTGCCCCAGCCCAGCAGAGCACAGAGTTTCTGGAGC...TATTTTTAGTACCGCACTTAGCAGACAGCTTTCCAAGTGTGCTTTCTTGCCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp AGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATCAGTACCCCCTCCTaGATCTGTGGATGGGAGCTC +
Preference number: 4 (lower is better)
Translates to: RAGNGLGERPFSTKLSALISTPS*ICGWEL
Trigger: GAGCTCCCATCCACAGATGCAGGAGGGGGTACTGAT...TAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp CTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACAGGTGGGCCGGTGAGGCCAGGGACTaGTGCCCTCAAATCCACATG +
Preference number: 4 (lower is better)
Translates to: LGERPFSTKLSALMNRWAGEARD*CPQIHM
Trigger: CATGTGGATTTGAGGGCAGCAGTCCCTGGCCTCACC...GGCCCACCTGTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACATGCAAGGTCTCTGGTaGCCAGGTCACCAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: GNGLGERPFSTKLSALMNMQGLW*PGHQPR
Trigger: CCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCAT...GTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp CAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAATTACTGGTCAAAAGGTaGTCGCTAACAAAACAGTGT +
Preference number: 4 (lower is better)
Translates to: QVSPSSFQGGSPKKVWGELLVKR*SLTKQC
Trigger: ACACTGTTTTGTTAGCGAGCACCTTTTGACCAGTAA...TTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000437268.6
ENST00000535268.5
CDS-3UTR CCA 90 bp CTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACAGGTGGGCCCTCCCCACTCTCAGATaGGATCTTGAGGCCGTCCAG +
Preference number: 4 (lower is better)
Translates to: LGERPFSTKLSALMNRWALPTLR*DLEAVQ
Trigger: CTGGACGGCCTCAAGATCCCATCTGAGAGTGGGGAG...GGCCCACCTGTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000437268.6
ENST00000438716.3
CDS-3UTR CCA 90 bp AGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTATCGCCAGCTGCTCAATaGTTTCCTCCAAGTGCACGC +
Preference number: 4 (lower is better)
Translates to: RAGNGLGERPFSTKLSALSPAAQ*FPPSAR
Trigger: GCGTGCACTTGGAGGAAACCATTGAGCAGCTGGCGA...TAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp AGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTATTGTCCAGCAGGTGGTaGTACTCCAGGTCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: RAGNGLGERPFSTKLSALLSSRW*YSRSSV
Trigger: GACAGAGGACCTGGAGTACCACCACCTGCTGGACAA...TAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACAGGTGGGCCTCGATGTCCCCTGACTaGTCGATCCAGAGCTTGCCC +
Preference number: 4 (lower is better)
Translates to: LGERPFSTKLSALMNRWASMSPD*SIQSLP
Trigger: GGGCAAGCTCTGGATCGACCAGTCAGGGGACATCGA...GGCCCACCTGTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGAAGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTGGCTGACAGGGTCTaGTACACTGTCTTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: GRAGNGLGERPFSTKLSALADRV*YTVFCF
Trigger: GAAGCAGAAGACAGTGTACCAGACCCTGTCAGCCAA...TGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000535268.5
CDS-3UTR CCA 90 bp TACCATCGAGGACTTGATATGTTGAGCTACAAAATTCTCCCAACTCAAAGCGGTGCTGCTTCTCGGTATTaGCCTCGTCCCAACGGCCCT +
Preference number: 4 (lower is better)
Translates to: YHRGLDMLSYKILPTQSGAASRY*PRPNGP
Trigger: AGGGCCGTTGGGACGAGGCCAATACCGAGAAGCAGC...ACCGCTTTGAGTTGGGAGAATTTTGTAGCTCAACATATCAAGTCCTCGATGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGAAGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCAGCGCTCAGAAGATGTTaGGGCACATATGCCAGTCTT +
Preference number: 4 (lower is better)
Translates to: GRAGNGLGERPFSTKLSAALRRC*GTYASL
Trigger: AAGACTGGCATATGTGCCCCAACATCTTCTGAGCGC...TGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACAGGTGGGCCCTGAGTTGTGGTAACTaGGGCAGGGGTTCCGGTAGG +
Preference number: 4 (lower is better)
Translates to: LGERPFSTKLSALMNRWALSCGN*GRGSGR
Trigger: CCTACCGGAACCCCTGCCCCAGTTACCACAACTCAG...GGCCCACCTGTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGCAACTCAAAGCGGTCTaGCTTCCTGATGTCTTAAAA +
Preference number: 4 (lower is better)
Translates to: PQIHMGVTISTPSCICGWQLKAV*LPDVLK
Trigger: TTTTAAGACATCAGGAAGCCAGACCGCTTTGAGTTG...CCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGAAGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATCCTGCATCTGTGGATaGGAGCTCCAGAAACTCTGT +
Preference number: 4 (lower is better)
Translates to: GRAGNGLGERPFSTKLSASCICG*ELQKLC
Trigger: ACAGAGTTTCTGGAGCTCCCATCCACAGATGCAGGA...TGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp AGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAGTCACCAGCCCAGGCTaGGCCAAGGGTTTGTTCATT +
Preference number: 4 (lower is better)
Translates to: RAGNGLGERPFSTKLSALVTSPG*AKGLFI
Trigger: AATGAACAAACCCTTGGCCCAGCCTGGGCTGGTGAC...TAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGAGGACTAAACTGAAATaGAAAGGATTGGAGTGTGGG +
Preference number: 4 (lower is better)
Translates to: LKSTWGLPSVPPPASVDGRTKLK*KGLECG
Trigger: CCCACACTCCAATCCTTTCCATTTCAGTTTAGTCCT...CCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACAAGTCCCTGCAGGCCTaGTGTCCATCCCTGACTCCC +
Preference number: 4 (lower is better)
Translates to: GNGLGERPFSTKLSALMNKSLQA*CPSLTP
Trigger: GGGAGTCAGGGATGGACACCAGGCCTGCAGGGACTT...GTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431368.5
ENST00000535268.5
3UTR CAA 72 bp GGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATaGAGTGCATTAATGAACAGGTGGGCCAGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: GNGLGERPFSTK*SALMNRWARLC
Trigger: GCACAGCCTGGCCCACCTGTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp AGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAGGTCATTGCACGTGCTaGGGTCATCTAACTTCAGGG +
Preference number: 4 (lower is better)
Translates to: RAGNGLGERPFSTKLSALGHCTC*GHLTSG
Trigger: CCCTGAAGTTAGATGACCTCAGCACGTGCAATGACC...TAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000437268.6
ENST00000438716.3
CDS-3UTR TCA 90 bp CTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACAGGTGGGCCTCTCAGATGGGATCTTaGGGCCGTCCAGCTCTGTCA +
Preference number: 4 (lower is better)
Translates to: LGERPFSTKLSALMNRWASQMGS*GRPALS
Trigger: TGACAGAGCTGGACGGCCTCAAGATCCCATCTGAGA...GGCCCACCTGTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000437268.6
ENST00000438716.3
CDS-3UTR TCA 90 bp TACCATCGAGGACTTGATATGTTGAGCTACAAAATTCTCCCAACTCAAAGCGGTTGGACAGGGGCTCATTaGAGTTCACCGGCATGGGGA +
Preference number: 4 (lower is better)
Translates to: YHRGLDMLSYKILPTQSGWTGAH*SSPAWG
Trigger: TCCCCATGCCGGTGAACTTCAATGAGCCCCTGTCCA...ACCGCTTTGAGTTGGGAGAATTTTGTAGCTCAACATATCAAGTCCTCGATGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp GGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACTGGACAGGGGCTCATTaGAGTTCACCGGCATGGGGA +
Preference number: 4 (lower is better)
Translates to: GNGLGERPFSTKLSALMNWTGAH*SSPAWG
Trigger: TCCCCATGCCGGTGAACTTCAATGAGCCCCTGTCCA...GTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp GGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACACTTGCTGGAGATGGTaGTCTCCTGCCAGAGGCTCC +
Preference number: 4 (lower is better)
Translates to: GNGLGERPFSTKLSALMNTCWRW*SPARGS
Trigger: GGAGCCTCTGGCAGGAGATCACCATCTCCAGCAAGT...GTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp CTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGGAGGACTTGATATGTTaGGCTACAAAATTCTCCCAA +
Preference number: 4 (lower is better)
Translates to: LKSTWGLPSVPPPASVDGEDLIC*ATKFSQ
Trigger: TTGGGAGAATTTTGTAGCTCAACATATCAAGTCCTC...CCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp AGGCTGTGCAGGCGCCTGTATTTGTTGCAAGGGTGGCGCTCAGAAGATGTTGGGATACCATCGAGGACTTaGTATGTTGAGCTACAAAAT +
Preference number: 4 (lower is better)
Translates to: RLCRRLYLLQGWRSEDVGIPSRT*YVELQN
Trigger: ATTTTGTAGCTCAACATATCAAGTCCTCGATGGTAT...CCCAACATCTTCTGAGCGCCACCCTTGCAACAAATACAGGCGCCTGCACAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452656.5
CDS-3UTR GCA 90 bp CTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACAGGTGGGCCTCCTCCGTGTCAATGTaGGCGGTGGACAGGTTGATG +
Preference number: 4 (lower is better)
Translates to: LGERPFSTKLSALMNRWASSVSM*AVDRLM
Trigger: CATCAACCTGTCCACCGCGCACATTGACACGGAGGA...GGCCCACCTGTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000438716.3
CDS-3UTR GCA 90 bp GGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACTGGAGTGCAGCGCCGTaGTTGGCGATGAGGTCATTG +
Preference number: 4 (lower is better)
Translates to: GNGLGERPFSTKLSALMNWSAAP*LAMRSL
Trigger: CAATGACCTCATCGCCAAGCACGGCGCTGCACTCCA...GTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000437268.6
ENST00000438716.3
CDS-3UTR GCA 90 bp CTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACAGGTGGGCCCTGCTCATACTGCAGTaGCCGCTGCCATTTCCGACT +
Preference number: 4 (lower is better)
Translates to: LGERPFSTKLSALMNRWALLILQ*PLPFPT
Trigger: AGTCGGAAATGGCAGCGGGCACTGCAGTATGAGCAG...GGCCCACCTGTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp CTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACAGGTGGGCCATGGTTTCCTCCAAGTaGACGCGCTGCTCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: LGERPFSTKLSALMNRWAMVSSK*TRCSCS
Trigger: TGAGCAGGAGCAGCGCGTGCACTTGGAGGAAACCAT...GGCCCACCTGTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACACTGAGCTGGTGCAGTaGACTGCCTTGTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: GNGLGERPFSTKLSALMNTELVQ*TALSSR
Trigger: CCTGCTGGACAAGGCAGTGCACTGCACCAGCTCAGT...GTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp TGTGGCAAGAAAGCACACTTGGAAAGCTGTCTGCTAAGTGCGGTACTAAAAATAACTGAGCTGGTGCAGTaGACTGCCTTGTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: CGKKAHLESCLLSAVLKITELVQ*TALSSR
Trigger: CCTGCTGGACAAGGCAGTGCACTGCACCAGCTCAGT...TATTTTTAGTACCGCACTTAGCAGACAGCTTTCCAAGTGTGCTTTCTTGCCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp AGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTATGTCACCTTCCGGGCTaGCTCTTTGGAGAAGTAGCT +
Preference number: 4 (lower is better)
Translates to: RAGNGLGERPFSTKLSALCHLPG*LFGEVA
Trigger: AGCTACTTCTCCAAAGAGGCAGCCCGGAAGGTGACA...TAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000535268.5
CDS-3UTR GCA 90 bp AGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTACACATATGCCAGTCTTaGTTCTCCTTGGCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: RAGNGLGERPFSTKLSALHICQS*FSLASQ
Trigger: CTGGGAGGCCAAGGAGAAGCAAGACTGGCATATGTG...TAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACAGGTGGGCCAGGCTGTaGAGGCGCCTGTATTTGTTG +
Preference number: 4 (lower is better)
Translates to: GNGLGERPFSTKLSALMNRWARL*RRLYLL
Trigger: CAACAAATACAGGCGCCTGCACAGCCTGGCCCACCT...GTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp TACCATCGAGGACTTGATATGTTGAGCTACAAAATTCTCCCAACTCAAAGCGGTGGTGAGGCCAGGGACTaGTGCCCTCAAATCCACATG +
Preference number: 4 (lower is better)
Translates to: YHRGLDMLSYKILPTQSGGEARD*CPQIHM
Trigger: CATGTGGATTTGAGGGCAGCAGTCCCTGGCCTCACC...ACCGCTTTGAGTTGGGAGAATTTTGTAGCTCAACATATCAAGTCCTCGATGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAAATTACTGGTCAAAAGGTaGTCGCTAACAAAACAGTGT +
Preference number: 4 (lower is better)
Translates to: GQPFLLPRWESQESVGRKLLVKR*SLTKQC
Trigger: ACACTGTTTTGTTAGCGAGCACCTTTTGACCAGTAA...TTTTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000437268.6
ENST00000535268.5
CDS-3UTR CCA 90 bp CTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACAGGTGGGCCTCGCCAGCTGCTCAATaGTTTCCTCCAAGTGCACGC +
Preference number: 4 (lower is better)
Translates to: LGERPFSTKLSALMNRWASPAAQ*FPPSAR
Trigger: GCGTGCACTTGGAGGAAACCATTGAGCAGCTGGCGA...GGCCCACCTGTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACAGGTGGGCCTCTGCTCCACTGAGCTaGTGCAGTGCACTGCCTTGT +
Preference number: 4 (lower is better)
Translates to: LGERPFSTKLSALMNRWASAPLS*CSALPC
Trigger: ACAAGGCAGTGCACTGCACCAGCTCAGTGGAGCAGA...GGCCCACCTGTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACGGCTCCAGCCATGCTTaGAGAACACGTAGTGCGCAG +
Preference number: 4 (lower is better)
Translates to: GNGLGERPFSTKLSALMNGSSHA*RTRSAQ
Trigger: CTGCGCACTACGTGTTCTCCAAGCATGGCTGGAGCC...GTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp AGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAGCCTGGAATTCTAAGTaGATGGCACCTAGCGGCATG +
Preference number: 4 (lower is better)
Translates to: RAGNGLGERPFSTKLSALAWNSK*MAPSGM
Trigger: CATGCCGCTAGGTGCCATCCACTTAGAATTCCAGGC...TAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACTCGATGTCCCCTGACTaGTCGATCCAGAGCTTGCCC +
Preference number: 4 (lower is better)
Translates to: GNGLGERPFSTKLSALMNSMSPD*SIQSLP
Trigger: GGGCAAGCTCTGGATCGACCAGTCAGGGGACATCGA...GTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp TACCATCGAGGACTTGATATGTTGAGCTACAAAATTCTCCCAACTCAAAGCGGTTCGATGTCCCCTGACTaGTCGATCCAGAGCTTGCCC +
Preference number: 4 (lower is better)
Translates to: YHRGLDMLSYKILPTQSGSMSPD*SIQSLP
Trigger: GGGCAAGCTCTGGATCGACCAGTCAGGGGACATCGA...ACCGCTTTGAGTTGGGAGAATTTTGTAGCTCAACATATCAAGTCCTCGATGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACAGGTGGGCCTCCGGGCTGCCTCTTTaGAGAAGTAGCTGTAGGGCA +
Preference number: 4 (lower is better)
Translates to: LGERPFSTKLSALMNRWASGLPL*RSSCRA
Trigger: TGCCCTACAGCTACTTCTCCAAAGAGGCAGCCCGGA...GGCCCACCTGTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp AGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTATCTTCCACAGCAGCTTaGCTGACAGGGTCTGGTACA +
Preference number: 4 (lower is better)
Translates to: RAGNGLGERPFSTKLSALSSTAA*LTGSGT
Trigger: TGTACCAGACCCTGTCAGCCAAGCTGCTGTGGAAGA...TAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000535268.5
CDS-3UTR CCA 90 bp GGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACAGTCTTGCTTCTCCTTaGCCTCCCAGTAGCCGCCCT +
Preference number: 4 (lower is better)
Translates to: GNGLGERPFSTKLSALMNSLASP*PPSSRP
Trigger: AGGGCGGCTACTGGGAGGCCAAGGAGAAGCAAGACT...GTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACGCATTAATGAACAGGTaGGCCAGGCTGTGCAGGCGC +
Preference number: 4 (lower is better)
Translates to: GNGLGERPFSTKLSALMNALMNR*ARLCRR
Trigger: GCGCCTGCACAGCCTGGCCCACCTGTTCATTAATGC...GTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp AGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAGGAAATAGGAAGGGCTaGGAATGGGCTGGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: RAGNGLGERPFSTKLSALGNRKG*EWAGRK
Trigger: CTTTCTCCCAGCCCATTCCCAGCCCTTCCTATTTCC...TAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACAGTTCCTCCCTGGGTTaGGGGCTGGTGATTTGCGCA +
Preference number: 4 (lower is better)
Translates to: GNGLGERPFSTKLSALMNSSSLG*GLVICA
Trigger: TGCGCAAATCACCAGCCCCCAACCCAGGGAGGAACT...GTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAACTAAACATCATGGCTaGAAAGAAATGGAGATCATT +
Preference number: 4 (lower is better)
Translates to: AGENPGQPFLLPRWESQETKHHG*KEMEII
Trigger: AATGATCTCCATTTCTTTCCAGCCATGATGTTTAGT...TTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAACTAAACATCATGGCTaGAAAGAAATGGAGATCATT +
Preference number: 4 (lower is better)
Translates to: PGQPFLLPRWESQESVGRTKHHG*KEMEII
Trigger: AATGATCTCCATTTCTTTCCAGCCATGATGTTTAGT...TCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAAAAAGGACTAAACTGAAATaGAAAGGATTGGAGTGTGGG +
Preference number: 4 (lower is better)
Translates to: VSPSSFQGGSPKKVWGEKRTKLK*KGLECG
Trigger: CCCACACTCCAATCCTTTCCATTTCAGTTTAGTCCT...TTTTTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGAC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp GGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACTGCGGACTCGCCTCTTaGCTTTGGATGAACCCTTGG +
Preference number: 4 (lower is better)
Translates to: GNGLGERPFSTKLSALMNCGLAS*LWMNPW
Trigger: CCAAGGGTTCATCCAAAGTCAAGAGGCGAGTCCGCA...GTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp CTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACAGGTGGGCCTGGCACCTAGCGGCATaGTGGAGATGTATTTTCCCC +
Preference number: 4 (lower is better)
Translates to: LGERPFSTKLSALMNRWAWHLAA*WRCIFP
Trigger: GGGGAAAATACATCTCCATCATGCCGCTAGGTGCCA...GGCCCACCTGTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp AGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAAGAGCTTGCCCACGATaGTGTTGTGAACAGTTGAGG +
Preference number: 4 (lower is better)
Translates to: RAGNGLGERPFSTKLSALRACPR*CCEQLR
Trigger: CCTCAACTGTTCACAACATCATCGTGGGCAAGCTCT...TAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp CTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACAGGTGGGCCAATCTCGATGTCCCCTaGCTGGTCGATCCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: LGERPFSTKLSALMNRWANLDVP*LVDPEL
Trigger: AAGCTCTGGATCGACCAGTCAGGGGACATCGAGATT...GGCCCACCTGTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp GTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAAAAGAGGACTTGATATGTTaGGCTACAAAATTCTCCCAA +
Preference number: 4 (lower is better)
Translates to: VSPSSFQGGSPKKVWGEKEDLIC*ATKFSQ
Trigger: TTGGGAGAATTTTGTAGCTCAACATATCAAGTCCTC...TTTTTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACAAGAGAGCAAACCATTaGCCAGCACGAACCAGCGGC +
Preference number: 4 (lower is better)
Translates to: GNGLGERPFSTKLSALMNKRANH*PARTSG
Trigger: GCCGCTGGTTCGTGCTGGGCAATGGTTTGCTCTCTT...GTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332585.11
CDS-3UTR GCA 90 bp TGTGGCAAGAAAGCACACTTGGAAAGCTGTCTGCTAAGTGCGGTACTAAAAATATTCTTCAGGGTGTGGTaGAGCTCGCTCTTGTCGGCT +
Preference number: 4 (lower is better)
Translates to: CGKKAHLESCLLSAVLKIFFRVW*SSLLSA
Trigger: AGCCGACAAGAGCGAGCTGCACCACACCCTGAAGAA...TATTTTTAGTACCGCACTTAGCAGACAGCTTTCCAAGTGTGCTTTCTTGCCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000437268.6
CDS-3UTR GCA 90 bp TACCATCGAGGACTTGATATGTTGAGCTACAAAATTCTCCCAACTCAAAGCGGTCTGCTCATACTGCAGTaGCCGCTGCCATTTCCGACT +
Preference number: 4 (lower is better)
Translates to: YHRGLDMLSYKILPTQSGLLILQ*PLPFPT
Trigger: AGTCGGAAATGGCAGCGGGCACTGCAGTATGAGCAG...ACCGCTTTGAGTTGGGAGAATTTTGTAGCTCAACATATCAAGTCCTCGATGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp TGTGGCAAGAAAGCACACTTGGAAAGCTGTCTGCTAAGTGCGGTACTAAAAATATGCTCCTGCTCATACTaGAGTGCCCGCTGCCATTTC +
Preference number: 4 (lower is better)
Translates to: CGKKAHLESCLLSAVLKICSCSY*SARCHF
Trigger: GAAATGGCAGCGGGCACTGCAGTATGAGCAGGAGCA...TATTTTTAGTACCGCACTTAGCAGACAGCTTTCCAAGTGTGCTTTCTTGCCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACTGCTCCTGCTCATACTaGAGTGCCCGCTGCCATTTC +
Preference number: 4 (lower is better)
Translates to: GNGLGERPFSTKLSALMNCSCSY*SARCHF
Trigger: GAAATGGCAGCGGGCACTGCAGTATGAGCAGGAGCA...GTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp TACCATCGAGGACTTGATATGTTGAGCTACAAAATTCTCCCAACTCAAAGCGGTTCCAAGTGCACGCGCTaGTCCTGCTCATACTGCAGT +
Preference number: 4 (lower is better)
Translates to: YHRGLDMLSYKILPTQSGSKCTR*SCSYCS
Trigger: ACTGCAGTATGAGCAGGAGCAGCGCGTGCACTTGGA...ACCGCTTTGAGTTGGGAGAATTTTGTAGCTCAACATATCAAGTCCTCGATGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACTCGAGGCTGTTGTGCTaGTTCGCCAGCTGCTCAATG +
Preference number: 4 (lower is better)
Translates to: GNGLGERPFSTKLSALMNSRLLC*FASCSM
Trigger: CATTGAGCAGCTGGCGAAGCAGCACAACAGCCTCGA...GTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp CTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACAGGTGGGCCCGGAACTTGTCCCGGTaGTACCTTCAGCTTTTCTGC +
Preference number: 4 (lower is better)
Translates to: LGERPFSTKLSALMNRWARNLSR*YLQLFC
Trigger: GCAGAAAAGCTGAAGGTAGCACCGGGACAAGTTCCG...GGCCCACCTGTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332585.11
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
CDS-3UTR GCA 90 bp TGTGGCAAGAAAGCACACTTGGAAAGCTGTCTGCTAAGTGCGGTACTAAAAATACTGCTGGGACTGCTATaGATGACCTTGGAGCACTCC +
Preference number: 4 (lower is better)
Translates to: CGKKAHLESCLLSAVLKILLGLL*MTLEHS
Trigger: GGAGTGCTCCAAGGTCATGCATAGCAGTCCCAGCAG...TATTTTTAGTACCGCACTTAGCAGACAGCTTTCCAAGTGTGCTTTCTTGCCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000535268.5
CDS-3UTR GCA 90 bp TGTGGCAAGAAAGCACACTTGGAAAGCTGTCTGCTAAGTGCGGTACTAAAAATAGGCGCCTGTATTTGTTaGAAGGGTGGCGCTCAGAAG +
Preference number: 4 (lower is better)
Translates to: CGKKAHLESCLLSAVLKIGACIC*KGGAQK
Trigger: CTTCTGAGCGCCACCCTTGCAACAAATACAGGCGCC...TATTTTTAGTACCGCACTTAGCAGACAGCTTTCCAAGTGTGCTTTCTTGCCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GGAAGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCACCAAACTCAGACAGGTaGACCCGTCTTCATCATTTT +
Preference number: 4 (lower is better)
Translates to: GRAGNGLGERPFSTKLSAPNSDR*TRLHHF
Trigger: AAAATGATGAAGACGGGTGCACCTGTCTGAGTTTGG...TGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp GTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAAAATTACTGGTCAAAAGGTaGTCGCTAACAAAACAGTGT +
Preference number: 4 (lower is better)
Translates to: VSPSSFQGGSPKKVWGEKLLVKR*SLTKQC
Trigger: ACACTGTTTTGTTAGCGAGCACCTTTTGACCAGTAA...TTTTTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000437268.6
ENST00000535268.5
CDS-3UTR CCA 90 bp TACCATCGAGGACTTGATATGTTGAGCTACAAAATTCTCCCAACTCAAAGCGGTTCGCCAGCTGCTCAATaGTTTCCTCCAAGTGCACGC +
Preference number: 4 (lower is better)
Translates to: YHRGLDMLSYKILPTQSGSPAAQ*FPPSAR
Trigger: GCGTGCACTTGGAGGAAACCATTGAGCAGCTGGCGA...ACCGCTTTGAGTTGGGAGAATTTTGTAGCTCAACATATCAAGTCCTCGATGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp TACCATCGAGGACTTGATATGTTGAGCTACAAAATTCTCCCAACTCAAAGCGGTCTTTGGATGAACCCTTaGGCACGAGCGAGGCACCAT +
Preference number: 4 (lower is better)
Translates to: YHRGLDMLSYKILPTQSGLWMNP*ARARHH
Trigger: ATGGTGCCTCGCTCGTGCCCAAGGGTTCATCCAAAG...ACCGCTTTGAGTTGGGAGAATTTTGTAGCTCAACATATCAAGTCCTCGATGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACAGGTGGGCCTGTAGTTGGGCTTGTTaGGAATGCGGACTCGCCTCT +
Preference number: 4 (lower is better)
Translates to: LGERPFSTKLSALMNRWACSWAC*ECGLAS
Trigger: AGAGGCGAGTCCGCATTCCCAACAAGCCCAACTACA...GGCCCACCTGTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp TGTGGCAAGAAAGCACACTTGGAAAGCTGTCTGCTAAGTGCGGTACTAAAAATATTGTCCAGCAGGTGGTaGTACTCCAGGTCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: CGKKAHLESCLLSAVLKILSSRW*YSRSSV
Trigger: GACAGAGGACCTGGAGTACCACCACCTGCTGGACAA...TATTTTTAGTACCGCACTTAGCAGACAGCTTTCCAAGTGTGCTTTCTTGCCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp TGTGGCAAGAAAGCACACTTGGAAAGCTGTCTGCTAAGTGCGGTACTAAAAATATCTGCTCCACTGAGCTaGTGCAGTGCACTGCCTTGT +
Preference number: 4 (lower is better)
Translates to: CGKKAHLESCLLSAVLKISAPLS*CSALPC
Trigger: ACAAGGCAGTGCACTGCACCAGCTCAGTGGAGCAGA...TATTTTTAGTACCGCACTTAGCAGACAGCTTTCCAAGTGTGCTTTCTTGCCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACAGGTGGGCCGGCAGGAACTTCAGCTaGCACCGGTCATTGGTCTTA +
Preference number: 4 (lower is better)
Translates to: LGERPFSTKLSALMNRWAGRNFS*HRSLVL
Trigger: TAAGACCAATGACCGGTGCCAGCTGAAGTTCCTGCC...GGCCCACCTGTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CATTTATTTACTGTTCGGTGTCTGCCTTCACACTGGGATGTCGGCTGCATAATAGGCAGGAACTTCAGCTaGCACCGGTCATTGGTCTTA +
Preference number: 4 (lower is better)
Translates to: HLFTVRCLPSHWDVGCIIGRNFS*HRSLVL
Trigger: TAAGACCAATGACCGGTGCCAGCTGAAGTTCCTGCC...TATTATGCAGCCGACATCCCAGTGTGAAGGCAGACACCGAACAGTAAATAAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433183.2
CDS-3UTR CCA 90 bp TACCATCGAGGACTTGATATGTTGAGCTACAAAATTCTCCCAACTCAAAGCGGTTCCGGGCTGCCTCTTTaGAGAAGTAGCTGTAGGGCA +
Preference number: 4 (lower is better)
Translates to: YHRGLDMLSYKILPTQSGSGLPL*RSSCRA
Trigger: TGCCCTACAGCTACTTCTCCAAAGAGGCAGCCCGGA...ACCGCTTTGAGTTGGGAGAATTTTGTAGCTCAACATATCAAGTCCTCGATGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACTCCGGGCTGCCTCTTTaGAGAAGTAGCTGTAGGGCA +
Preference number: 4 (lower is better)
Translates to: GNGLGERPFSTKLSALMNSGLPL*RSSCRA
Trigger: TGCCCTACAGCTACTTCTCCAAAGAGGCAGCCCGGA...GTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp AGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTATTGGCTGACAGGGTCTaGTACACTGTCTTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: RAGNGLGERPFSTKLSALLADRV*YTVFCF
Trigger: GAAGCAGAAGACAGTGTACCAGACCCTGTCAGCCAA...TAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000535268.5
CDS-3UTR CCA 90 bp GGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACCTTCTCAAACCACAGTaGCGTGTAGGCATCCGCCTC +
Preference number: 4 (lower is better)
Translates to: GNGLGERPFSTKLSALMNLLKPQ*RVGIRL
Trigger: GAGGCGGATGCCTACACGCCACTGTGGTTTGAGAAG...GTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACAGGTGGGCCGGAAATAGGAAGGGCTaGGAATGGGCTGGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: LGERPFSTKLSALMNRWAGNRKG*EWAGRK
Trigger: CTTTCTCCCAGCCCATTCCCAGCCCTTCCTATTTCC...GGCCCACCTGTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAACTAAACATCATGGCTaGAAAGAAATGGAGATCATT +
Preference number: 4 (lower is better)
Translates to: QVSPSSFQGGSPKKVWGETKHHG*KEMEII
Trigger: AATGATCTCCATTTCTTTCCAGCCATGATGTTTAGT...TTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAACTAAACATCATGGCTaGAAAGAAATGGAGATCATT +
Preference number: 4 (lower is better)
Translates to: LERTQVSPSSFQGGSPKKTKHHG*KEMEII
Trigger: AATGATCTCCATTTCTTTCCAGCCATGATGTTTAGT...TTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACAGGTGGGCCGCCCTCAAATCCACATaGGGGTTACCATCAGTACCC +
Preference number: 4 (lower is better)
Translates to: LGERPFSTKLSALMNRWAALKST*GLPSVP
Trigger: GGGTACTGATGGTAACCCCCATGTGGATTTGAGGGC...GGCCCACCTGTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp GGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACTGGCACCTAGCGGCATaGTGGAGATGTATTTTCCCC +
Preference number: 4 (lower is better)
Translates to: GNGLGERPFSTKLSALMNWHLAA*WRCIFP
Trigger: GGGGAAAATACATCTCCATCATGCCGCTAGGTGCCA...GTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp TACCATCGAGGACTTGATATGTTGAGCTACAAAATTCTCCCAACTCAAAGCGGTTGGCACCTAGCGGCATaGTGGAGATGTATTTTCCCC +
Preference number: 4 (lower is better)
Translates to: YHRGLDMLSYKILPTQSGWHLAA*WRCIFP
Trigger: GGGGAAAATACATCTCCATCATGCCGCTAGGTGCCA...ACCGCTTTGAGTTGGGAGAATTTTGTAGCTCAACATATCAAGTCCTCGATGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp TGTGGCAAGAAAGCACACTTGGAAAGCTGTCTGCTAAGTGCGGTACTAAAAATATGGCACCTAGCGGCATaGTGGAGATGTATTTTCCCC +
Preference number: 4 (lower is better)
Translates to: CGKKAHLESCLLSAVLKIWHLAA*WRCIFP
Trigger: GGGGAAAATACATCTCCATCATGCCGCTAGGTGCCA...TATTTTTAGTACCGCACTTAGCAGACAGCTTTCCAAGTGTGCTTTCTTGCCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp CATTTATTTACTGTTCGGTGTCTGCCTTCACACTGGGATGTCGGCTGCATAATAGATGTTGTGAACAGTTaGGGTGCTCTTCCTCCACAC +
Preference number: 4 (lower is better)
Translates to: HLFTVRCLPSHWDVGCIIDVVNS*GALPPH
Trigger: GTGTGGAGGAAGAGCACCTCAACTGTTCACAACATC...TATTATGCAGCCGACATCCCAGTGTGAAGGCAGACACCGAACAGTAAATAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433183.2
CDS-3UTR TCA 90 bp CTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACAGGTGGGCCAGAGCTTGCCCACGATaGTGTTGTGAACAGTTGAGG +
Preference number: 4 (lower is better)
Translates to: LGERPFSTKLSALMNRWARACPR*CCEQLR
Trigger: CCTCAACTGTTCACAACATCATCGTGGGCAAGCTCT...GGCCCACCTGTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp CTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACAGGTGGGCCTACCTTCAGCTTTTCTaGTGTCTTCCTTGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: LGERPFSTKLSALMNRWAYLQLF*CLPWPR
Trigger: CCGAGGCCAAGGAAGACAGCAGAAAAGCTGAAGGTA...GGCCCACCTGTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332585.11
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
CDS-3UTR GCA 90 bp TACCATCGAGGACTTGATATGTTGAGCTACAAAATTCTCCCAACTCAAAGCGGTTGTCACCTTCCGGGCTaGCTCTTTGGAGAAGTAGCT +
Preference number: 4 (lower is better)
Translates to: YHRGLDMLSYKILPTQSGCHLPG*LFGEVA
Trigger: AGCTACTTCTCCAAAGAGGCAGCCCGGAAGGTGACA...ACCGCTTTGAGTTGGGAGAATTTTGTAGCTCAACATATCAAGTCCTCGATGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000535268.5
CDS-3UTR GCA 90 bp CATTTATTTACTGTTCGGTGTCTGCCTTCACACTGGGATGTCGGCTGCATAATATTACTGTTCGGTGTCTaGCTTCACACTGGGATGTCG +
Preference number: 4 (lower is better)
Translates to: HLFTVRCLPSHWDVGCIILLFGV*LHTGMS
Trigger: CGACATCCCAGTGTGAAGGCAGACACCGAACAGTAA...TATTATGCAGCCGACATCCCAGTGTGAAGGCAGACACCGAACAGTAAATAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433183.2
CDS-3UTR CCA 90 bp GGAAGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCAATGTGGAGTCTTCCATaGCATCAAAGTACTCGGTAT +
Preference number: 4 (lower is better)
Translates to: GRAGNGLGERPFSTKLSAMWSLP*HQSTRY
Trigger: ATACCGAGTACTTTGATGCCATGGAAGACTCCACAT...TGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp TGTGGCAAGAAAGCACACTTGGAAAGCTGTCTGCTAAGTGCGGTACTAAAAATATGTAGTTGGGCTTGTTaGGAATGCGGACTCGCCTCT +
Preference number: 4 (lower is better)
Translates to: CGKKAHLESCLLSAVLKICSWAC*ECGLAS
Trigger: AGAGGCGAGTCCGCATTCCCAACAAGCCCAACTACA...TATTTTTAGTACCGCACTTAGCAGACAGCTTTCCAAGTGTGCTTTCTTGCCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp TACCATCGAGGACTTGATATGTTGAGCTACAAAATTCTCCCAACTCAAAGCGGTTGTAGTTGGGCTTGTTaGGAATGCGGACTCGCCTCT +
Preference number: 4 (lower is better)
Translates to: YHRGLDMLSYKILPTQSGCSWAC*ECGLAS
Trigger: AGAGGCGAGTCCGCATTCCCAACAAGCCCAACTACA...ACCGCTTTGAGTTGGGAGAATTTTGTAGCTCAACATATCAAGTCCTCGATGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACGGCAGGAACTTCAGCTaGCACCGGTCATTGGTCTTA +
Preference number: 4 (lower is better)
Translates to: GNGLGERPFSTKLSALMNGRNFS*HRSLVL
Trigger: TAAGACCAATGACCGGTGCCAGCTGAAGTTCCTGCC...GTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp TGTGGCAAGAAAGCACACTTGGAAAGCTGTCTGCTAAGTGCGGTACTAAAAATATCTTCCACAGCAGCTTaGCTGACAGGGTCTGGTACA +
Preference number: 4 (lower is better)
Translates to: CGKKAHLESCLLSAVLKISSTAA*LTGSGT
Trigger: TGTACCAGACCCTGTCAGCCAAGCTGCTGTGGAAGA...TATTTTTAGTACCGCACTTAGCAGACAGCTTTCCAAGTGTGCTTTCTTGCCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000535268.5
CDS-3UTR CCA 90 bp GGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACGGGCTGGGAATGGGCTaGGAGAAAGACCATTCAGTA +
Preference number: 4 (lower is better)
Translates to: GNGLGERPFSTKLSALMNGLGMG*EKDHSV
Trigger: TACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCC...GTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACAGGTGGGCCTTCCTCCTTCCAAGGTaGGAGTCCCAAGAAAGTGTG +
Preference number: 4 (lower is better)
Translates to: LGERPFSTKLSALMNRWAFLLPR*ESQESV
Trigger: CACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAA...GGCCCACCTGTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp TGTGGCAAGAAAGCACACTTGGAAAGCTGTCTGCTAAGTGCGGTACTAAAAATATCATTATTGCTGATTTaGGGCCTGGGTCTCAGGGCG +
Preference number: 4 (lower is better)
Translates to: CGKKAHLESCLLSAVLKISLLLI*GLGLRA
Trigger: CGCCCTGAGACCCAGGCCCCAAATCAGCAATAATGA...TATTTTTAGTACCGCACTTAGCAGACAGCTTTCCAAGTGTGCTTTCTTGCCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp TTTGATAGTTTCACATTTATTTACTGTTCGGTGTCTGCCTTCACACTGGGATGTGTGCTTAGAGGTGGCTaGTCCTGCTTACCTTCCGGG +
Preference number: 4 (lower is better)
Translates to: FDSFTFIYCSVSAFTLGCVLRGG*SCLPSG
Trigger: CCCGGAAGGTAAGCAGGACCAGCCACCTCTAAGCAC...ACATCCCAGTGTGAAGGCAGACACCGAACAGTAAATAAATGTGAAACTATCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433183.2
3UTR CAA 72 bp TGTGGGCAGCTCAGATACCATCGAGGACTTGATATGTaGAGCTACAAAATTCTCCCAACTCAAAGCGGTCTG +
Preference number: 4 (lower is better)
Translates to: CGQLRYHRGLDM*SYKILPTQSGL
Trigger: CAGACCGCTTTGAGTTGGGAGAATTTTGTAGCTCAACATATCAAGTCCTCGATGGTATCTGAGCTGCCCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp TGTGGCAAGAAAGCACACTTGGAAAGCTGTCTGCTAAGTGCGGTACTAAAAATAGATGTTGTGAACAGTTaGGGTGCTCTTCCTCCACAC +
Preference number: 4 (lower is better)
Translates to: CGKKAHLESCLLSAVLKIDVVNS*GALPPH
Trigger: GTGTGGAGGAAGAGCACCTCAACTGTTCACAACATC...TATTTTTAGTACCGCACTTAGCAGACAGCTTTCCAAGTGTGCTTTCTTGCCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp TACCATCGAGGACTTGATATGTTGAGCTACAAAATTCTCCCAACTCAAAGCGGTTGGGACTGCTATGCATaGCCTTGGAGCACTCCATTT +
Preference number: 4 (lower is better)
Translates to: YHRGLDMLSYKILPTQSGWDCYA*PWSTPF
Trigger: AAATGGAGTGCTCCAAGGTCATGCATAGCAGTCCCA...ACCGCTTTGAGTTGGGAGAATTTTGTAGCTCAACATATCAAGTCCTCGATGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000535268.5
CDS-3UTR TCA 90 bp CTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACAGGTGGGCCAGCGGTCTGGCTTCCTaGTGTCTTAAAAATAAGGGG +
Preference number: 4 (lower is better)
Translates to: LGERPFSTKLSALMNRWASGLAS*CLKNKG
Trigger: CCCCTTATTTTTAAGACATCAGGAAGCCAGACCGCT...GGCCCACCTGTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp AGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTACCAAACTCAGACAGGTaGACCCGTCTTCATCATTTT +
Preference number: 4 (lower is better)
Translates to: RAGNGLGERPFSTKLSALPNSDR*TRLHHF
Trigger: AAAATGATGAAGACGGGTGCACCTGTCTGAGTTTGG...TAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACTTGGCTGACAGGGTCTaGTACACTGTCTTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: GNGLGERPFSTKLSALMNLADRV*YTVFCF
Trigger: GAAGCAGAAGACAGTGTACCAGACCCTGTCAGCCAA...GTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000535268.5
CDS-3UTR CCA 90 bp TGTGGCAAGAAAGCACACTTGGAAAGCTGTCTGCTAAGTGCGGTACTAAAAATATTGGCTGACAGGGTCTaGTACACTGTCTTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: CGKKAHLESCLLSAVLKILADRV*YTVFCF
Trigger: GAAGCAGAAGACAGTGTACCAGACCCTGTCAGCCAA...TATTTTTAGTACCGCACTTAGCAGACAGCTTTCCAAGTGTGCTTTCTTGCCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000535268.5
CDS-3UTR CCA 90 bp TGTGGCAAGAAAGCACACTTGGAAAGCTGTCTGCTAAGTGCGGTACTAAAAATAGCGCTCAGAAGATGTTaGGGCACATATGCCAGTCTT +
Preference number: 4 (lower is better)
Translates to: CGKKAHLESCLLSAVLKIALRRC*GTYASL
Trigger: AAGACTGGCATATGTGCCCCAACATCTTCTGAGCGC...TATTTTTAGTACCGCACTTAGCAGACAGCTTTCCAAGTGTGCTTTCTTGCCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp TGTGGCAAGAAAGCACACTTGGAAAGCTGTCTGCTAAGTGCGGTACTAAAAATATTCCTCCTTCCAAGGTaGGAGTCCCAAGAAAGTGTG +
Preference number: 4 (lower is better)
Translates to: CGKKAHLESCLLSAVLKIFLLPR*ESQESV
Trigger: CACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAA...TATTTTTAGTACCGCACTTAGCAGACAGCTTTCCAAGTGTGCTTTCTTGCCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp TACCATCGAGGACTTGATATGTTGAGCTACAAAATTCTCCCAACTCAAAGCGGTTTCCTCCTTCCAAGGTaGGAGTCCCAAGAAAGTGTG +
Preference number: 4 (lower is better)
Translates to: YHRGLDMLSYKILPTQSGFLLPR*ESQESV
Trigger: CACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAA...ACCGCTTTGAGTTGGGAGAATTTTGTAGCTCAACATATCAAGTCCTCGATGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACAGGTGGGCCGCCAGGACACTTTTGTaGCAAGAAAGCACACTTGGA +
Preference number: 4 (lower is better)
Translates to: LGERPFSTKLSALMNRWAARTLL*QESTLG
Trigger: TCCAAGTGTGCTTTCTTGCCACAAAAGTGTCCTGGC...GGCCCACCTGTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp TGTGGCAAGAAAGCACACTTGGAAAGCTGTCTGCTAAGTGCGGTACTAAAAATATCCTGCATCTGTGGATaGGAGCTCCAGAAACTCTGT +
Preference number: 4 (lower is better)
Translates to: CGKKAHLESCLLSAVLKISCICG*ELQKLC
Trigger: ACAGAGTTTCTGGAGCTCCCATCCACAGATGCAGGA...TATTTTTAGTACCGCACTTAGCAGACAGCTTTCCAAGTGTGCTTTCTTGCCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp TACCATCGAGGACTTGATATGTTGAGCTACAAAATTCTCCCAACTCAAAGCGGTAGCGGTCTGGCTTCCTaGTGTCTTAAAAATAAGGGG +
Preference number: 4 (lower is better)
Translates to: YHRGLDMLSYKILPTQSGSGLAS*CLKNKG
Trigger: CCCCTTATTTTTAAGACATCAGGAAGCCAGACCGCT...ACCGCTTTGAGTTGGGAGAATTTTGTAGCTCAACATATCAAGTCCTCGATGGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp TGTGGCAAGAAAGCACACTTGGAAAGCTGTCTGCTAAGTGCGGTACTAAAAATAAGCGGTCTGGCTTCCTaGTGTCTTAAAAATAAGGGG +
Preference number: 4 (lower is better)
Translates to: CGKKAHLESCLLSAVLKISGLAS*CLKNKG
Trigger: CCCCTTATTTTTAAGACATCAGGAAGCCAGACCGCT...TATTTTTAGTACCGCACTTAGCAGACAGCTTTCCAAGTGTGCTTTCTTGCCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR TCA 90 bp GGAAGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCAATACCATCGAGGACTTaGTATGTTGAGCTACAAAAT +
Preference number: 4 (lower is better)
Translates to: GRAGNGLGERPFSTKLSAIPSRT*YVELQN
Trigger: ATTTTGTAGCTCAACATATCAAGTCCTCGATGGTAT...TGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp TACCATCGAGGACTTGATATGTTGAGCTACAAAATTCTCCCAACTCAAAGCGGTTGTGAACAGTTGAGGTaGTCTTCCTCCACACGTAGT +
Preference number: 4 (lower is better)
Translates to: YHRGLDMLSYKILPTQSGCEQLR*SSSTRS
Trigger: ACTACGTGTGGAGGAAGAGCACCTCAACTGTTCACA...ACCGCTTTGAGTTGGGAGAATTTTGTAGCTCAACATATCAAGTCCTCGATGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR GCA 90 bp TTTGATAGTTTCACATTTATTTACTGTTCGGTGTCTGCCTTCACACTGGGATGTGCTTACCTTCCGGGCTaGCTCTTTGGAGAAGTAGCT +
Preference number: 4 (lower is better)
Translates to: FDSFTFIYCSVSAFTLGCAYLPG*LFGEVA
Trigger: AGCTACTTCTCCAAAGAGGCAGCCCGGAAGGTAAGC...ACATCCCAGTGTGAAGGCAGACACCGAACAGTAAATAAATGTGAAACTATCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433183.2
CDS-3UTR CCA 90 bp GGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACGCTGGCACCGGTCATTaGTCTTATGGTTCACAATCT +
Preference number: 4 (lower is better)
Translates to: GNGLGERPFSTKLSALMNAGTGH*SYGSQS
Trigger: AGATTGTGAACCATAAGACCAATGACCGGTGCCAGC...GTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp TGTGGCAAGAAAGCACACTTGGAAAGCTGTCTGCTAAGTGCGGTACTAAAAATATATTTGTTGCAAGGGTaGCGCTCAGAAGATGTTGGG +
Preference number: 4 (lower is better)
Translates to: CGKKAHLESCLLSAVLKIYLLQG*RSEDVG
Trigger: CCCAACATCTTCTGAGCGCCACCCTTGCAACAAATA...TATTTTTAGTACCGCACTTAGCAGACAGCTTTCCAAGTGTGCTTTCTTGCCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp TGTGGCAAGAAAGCACACTTGGAAAGCTGTCTGCTAAGTGCGGTACTAAAAATACGGTCATTGGTCTTATaGTTCACAATCTCGATGTCC +
Preference number: 4 (lower is better)
Translates to: CGKKAHLESCLLSAVLKIRSLVL*FTISMS
Trigger: GGACATCGAGATTGTGAACCATAAGACCAATGACCG...TATTTTTAGTACCGCACTTAGCAGACAGCTTTCCAAGTGTGCTTTCTTGCCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACCGGTCATTGGTCTTATaGTTCACAATCTCGATGTCC +
Preference number: 4 (lower is better)
Translates to: GNGLGERPFSTKLSALMNRSLVL*FTISMS
Trigger: GGACATCGAGATTGTGAACCATAAGACCAATGACCG...GTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACAGGTGGGCCAGGACTAAACTGAAATaGAAAGGATTGGAGTGTGGG +
Preference number: 4 (lower is better)
Translates to: LGERPFSTKLSALMNRWARTKLK*KGLECG
Trigger: CCCACACTCCAATCCTTTCCATTTCAGTTTAGTCCT...GGCCCACCTGTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp CTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACAGGTGGGCCGCTGTGACCCCAGAATaGTTAAAACATCAGCGAATT +
Preference number: 4 (lower is better)
Translates to: LGERPFSTKLSALMNRWAAVTPE*LKHQRI
Trigger: AATTCGCTGATGTTTTAACCATTCTGGGGTCACAGC...GGCCCACCTGTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438716.3
CDS-3UTR TCA 90 bp CTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACAGGTGGGCCGAGGACTTGATATGTTaGGCTACAAAATTCTCCCAA +
Preference number: 4 (lower is better)
Translates to: LGERPFSTKLSALMNRWAEDLIC*ATKFSQ
Trigger: TTGGGAGAATTTTGTAGCTCAACATATCAAGTCCTC...GGCCCACCTGTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp GGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACATGTGGAGTCTTCCATaGCATCAAAGTACTCGGTAT +
Preference number: 4 (lower is better)
Translates to: GNGLGERPFSTKLSALMNMWSLP*HQSTRY
Trigger: ATACCGAGTACTTTGATGCCATGGAAGACTCCACAT...GTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp TACCATCGAGGACTTGATATGTTGAGCTACAAAATTCTCCCAACTCAAAGCGGTCAACTCAAAGCGGTCTaGCTTCCTGATGTCTTAAAA +
Preference number: 4 (lower is better)
Translates to: YHRGLDMLSYKILPTQSGQLKAV*LPDVLK
Trigger: TTTTAAGACATCAGGAAGCCAGACCGCTTTGAGTTG...ACCGCTTTGAGTTGGGAGAATTTTGTAGCTCAACATATCAAGTCCTCGATGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp TACCATCGAGGACTTGATATGTTGAGCTACAAAATTCTCCCAACTCAAAGCGGTCTAACAAAACAGTGTTaGGGAGAGGTACATTCCACA +
Preference number: 4 (lower is better)
Translates to: YHRGLDMLSYKILPTQSGLTKQC*GEVHST
Trigger: TGTGGAATGTACCTCTCCCCAACACTGTTTTGTTAG...ACCGCTTTGAGTTGGGAGAATTTTGTAGCTCAACATATCAAGTCCTCGATGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000437268.6
ENST00000535268.5
CDS-3UTR TCA 90 bp TGTGGCAAGAAAGCACACTTGGAAAGCTGTCTGCTAAGTGCGGTACTAAAAATAATACCATCGAGGACTTaGTATGTTGAGCTACAAAAT +
Preference number: 4 (lower is better)
Translates to: CGKKAHLESCLLSAVLKIIPSRT*YVELQN
Trigger: ATTTTGTAGCTCAACATATCAAGTCCTCGATGGTAT...TATTTTTAGTACCGCACTTAGCAGACAGCTTTCCAAGTGTGCTTTCTTGCCACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CCA 90 bp TACCATCGAGGACTTGATATGTTGAGCTACAAAATTCTCCCAACTCAAAGCGGTACTAAACATCATGGCTaGAAAGAAATGGAGATCATT +
Preference number: 4 (lower is better)
Translates to: YHRGLDMLSYKILPTQSGTKHHG*KEMEII
Trigger: AATGATCTCCATTTCTTTCCAGCCATGATGTTTAGT...ACCGCTTTGAGTTGGGAGAATTTTGTAGCTCAACATATCAAGTCCTCGATGGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS GCA 90 bp GCCTCCAATCGGCGGGGCGCTACATGGCGCCGGGTCCCGGGGGCTTaGACGGACGCGTGCACAGCTCGGTGGGCCGCCCGGCGGAGGCGG +
Preference number: 5 (lower is better)
Translates to: ASNRRGATWRRVPGA*TDACTARWAARRRR
Trigger: CCGCCTCCGCCGGGCGGCCCACCGAGCTGTGCACGCGTCCGTGCAAGCCCCCGGGACCCGGCGCCATGTAGCGCCCCGCCGATTGGAGGC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437268.6
CDS CCA 90 bp GACACCTGTTCTGACAGCGGTCCCCGCTCCGGTTCGGGCACGGGCTaGGGCTGGGGCTTGGGCTCCGGCCCGGAGCCGGACGTGGAAGCG +
Preference number: 5 (lower is better)
Translates to: DTCSDSGPRSGSGTG*GWGLGSGPEPDVEA
Trigger: CGCTTCCACGTCCGGCTCCGGGCCGGAGCCCAAGCCCCAGCCCCAGCCCGTGCCCGAACCGGAGCGGGGACCGCTGTCAGAACAGGTGTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332585.11
ENST00000446658.6
CDS CCA 90 bp GGCCCGGAGCCGGACGTGGAAGCGCTCATGCCCGGCGCCGCCGTGTaGCACGACAGGCAGGGGACAACCGTGAACAGCGACGAGAGCCCG +
Preference number: 5 (lower is better)
Translates to: GPEPDVEALMPGAAV*HDRQGTTVNSDESP
Trigger: CGGGCTCTCGTCGCTGTTCACGGTTGTCCCCTGCCTGTCGTGCCACACGGCGGCGCCGGGCATGAGCGCTTCCACGTCCGGCTCCGGGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332585.11
ENST00000446658.6
CDS CCA 90 bp GCCCTTCTCCATCAGCCGCTGGTCGGGCCGCAGGCGGCTGTCGGTTaGCGCTACGCCCTCCTCGTGCTCGTTGAGGGTCAGGGCCAGCTC +
Preference number: 5 (lower is better)
Translates to: ALLHQPLVGPQAAVG*RYALLVLVEGQGQL
Trigger: GAGCTGGCCCTGACCCTCAACGAGCACGAGGAGGGCGTAGCGCCAACCGACAGCCGCCTGCGGCCCGACCAGCGGCTGATGGAGAAGGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000446658.6
ENST00000452656.5
ENST00000535268.5
CDS CCA 90 bp TGTCTGTGGGTCGCTCCTGCGGCCGCCAGAAGCGGTGGCCCCAAGTaGCCGCCTCACCGCCTCCACCTCCTGAGCCAGCTGGCCTACGGT +
Preference number: 5 (lower is better)
Translates to: CLWVAPAAARSGGPK*PPHRLHLLSQLAYG
Trigger: ACCGTAGGCCAGCTGGCTCAGGAGGTGGAGGCGGTGAGGCGGCCACTTGGGGCCACCGCTTCTGGCGGCCGCAGGAGCGACCCACAGACA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000403222.7
ENST00000407373.5
ENST00000438716.3
CDS-3UTR CAA 90 bp GGGCCAGCCGGCCTGAGTTGTGGTAACTGGGGCAGGGGTTCCGGTAGGGCCCAGAAGCTCTTGGAGGGGTaGGCCGGCCGGCCAGGGGCA +
Preference number: 5 (lower is better)
Translates to: GPAGLSCGNWGRGSGRAQKLLEG*AGRPGA
Trigger: TGCCCCTGGCCGGCCGGCCAACCCCTCCAAGAGCTT...CTGGGCCCTACCGGAACCCCTGCCCCAGTTACCACAACTCAGGCCGGCTGGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp GGGCCAGCCGGCCTGAGTTGTGGTAACTGGGGCAGGGGTTCCGGTAGGGCCCAGGCCCGCTCGAGGCTGTaGTGCTGCTTCGCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: GPAGLSCGNWGRGSGRAQARSRL*CCFASC
Trigger: GCAGCTGGCGAAGCAGCACAACAGCCTCGAGCGGGC...CTGGGCCCTACCGGAACCCCTGCCCCAGTTACCACAACTCAGGCCGGCTGGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp AGTTCCTCCCTGGGTTGGGGGCTGGTGATTTGCGCAGCCCATGGCCCGGGCCAGGCAGGCGGCTGTCGGTaGGCGCTACGCCCTCCTCGT +
Preference number: 5 (lower is better)
Translates to: SSSLGWGLVICAAHGPGQAGGCR*ALRPPR
Trigger: ACGAGGAGGGCGTAGCGCCAACCGACAGCCGCCTGC...CTGGCCCGGGCCATGGGCTGCGCAAATCACCAGCCCCCAACCCAGGGAGGAACT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS CCA 90 bp TTCTCGGTATTGGCCTCGTCCCAACGGCCCTTCTCCATCAGCCGCTaGTCGGGCCGCAGGCGGCTGTCGGTTGGCGCTACGCCCTCCTCG +
Preference number: 5 (lower is better)
Translates to: FSVLASSQRPFSISR*SGRRRLSVGATPSS
Trigger: CGAGGAGGGCGTAGCGCCAACCGACAGCCGCCTGCGGCCCGACCAGCGGCTGATGGAGAAGGGCCGTTGGGACGAGGCCAATACCGAGAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000446658.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp AGTTCCTCCCTGGGTTGGGGGCTGGTGATTTGCGCAGCCCATGGCCCGGGCCAGGCCCGCTCGAGGCTGTaGTGCTGCTTCGCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: SSSLGWGLVICAAHGPGQARSRL*CCFASC
Trigger: GCAGCTGGCGAAGCAGCACAACAGCCTCGAGCGGGC...CTGGCCCGGGCCATGGGCTGCGCAAATCACCAGCCCCCAACCCAGGGAGGAACT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp CAGGTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCTGGGGGCTGGAGAGAAAGCTCTTGGAGGGGTaGGCCGGCCGGCCAGGGGCA +
Preference number: 5 (lower is better)
Translates to: QVHNEGARVTRRTWGLERKLLEG*AGRPGA
Trigger: TGCCCCTGGCCGGCCGGCCAACCCCTCCAAGAGCTT...TCTCTCCAGCCCCCAGGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGACCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp AGGAGGGATGCAAGGTCTCTGGTGCCCAGGTCACCAGCCCAGGCTGGGCCAAGGAAGCTCTTGGAGGGGTaGGCCGGCCGGCCAGGGGCA +
Preference number: 5 (lower is better)
Translates to: RRDARSLVPRSPAQAGPRKLLEG*AGRPGA
Trigger: TGCCCCTGGCCGGCCGGCCAACCCCTCCAAGAGCTT...CCTTGGCCCAGCCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCATCCCTCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp AGGAGGGATGCAAGGTCTCTGGTGCCCAGGTCACCAGCCCAGGCTGGGCCAAGGGCAGGCGGCTGTCGGTaGGCGCTACGCCCTCCTCGT +
Preference number: 5 (lower is better)
Translates to: RRDARSLVPRSPAQAGPRAGGCR*ALRPPR
Trigger: ACGAGGAGGGCGTAGCGCCAACCGACAGCCGCCTGC...CCTTGGCCCAGCCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCATCCCTCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp GGGCCAGCCGGCCTGAGTTGTGGTAACTGGGGCAGGGGTTCCGGTAGGGCCCAGCGCTGCTTCTCGGTATaGGCCTCGTCCCAACGGCCC +
Preference number: 5 (lower is better)
Translates to: GPAGLSCGNWGRGSGRAQRCFSV*ASSQRP
Trigger: GGGCCGTTGGGACGAGGCCAATACCGAGAAGCAGCG...CTGGGCCCTACCGGAACCCCTGCCCCAGTTACCACAACTCAGGCCGGCTGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS TCA 90 bp TTCCGATCTTGGCACTGCCTCCGAAACTGCCTCCGACACCTGTTCTaGCAGCGGTCCCCGCTCCGGTTCGGGCACGGGCTGGGGCTGGGG +
Preference number: 5 (lower is better)
Translates to: FRSWHCLRNCLRHLF*QRSPLRFGHGLGLG
Trigger: CCCCAGCCCCAGCCCGTGCCCGAACCGGAGCGGGGACCGCTGTCAGAACAGGTGTCGGAGGCAGTTTCGGAGGCAGTGCCAAGATCGGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332585.11
ENST00000446658.6
CDS-3UTR CAA 90 bp AGTTCCTCCCTGGGTTGGGGGCTGGTGATTTGCGCAGCCCATGGCCCGGGCCAGTGGTGCAGCTCGCTCTaGTCGGCTGGGGTGGTAGCC +
Preference number: 5 (lower is better)
Translates to: SSSLGWGLVICAAHGPGQWCSSL*SAGVVA
Trigger: GGCTACCACCCCAGCCGACAAGAGCGAGCTGCACCA...CTGGCCCGGGCCATGGGCTGCGCAAATCACCAGCCCCCAACCCAGGGAGGAACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000437268.6
CDS-3UTR CAA 90 bp CAGGTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCTGGGGGCTGGAGAGAGCCCGCTCGAGGCTGTaGTGCTGCTTCGCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: QVHNEGARVTRRTWGLERARSRL*CCFASC
Trigger: GCAGCTGGCGAAGCAGCACAACAGCCTCGAGCGGGC...TCTCTCCAGCCCCCAGGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGACCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp GGTTCCGGTAGGGCCCAGGTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCCCCTCAATGAAGCTCTaGGAGGGGTTGGCCGGCCGG +
Preference number: 5 (lower is better)
Translates to: GSGRAQVHNEGARVTRRTPSMKL*EGLAGR
Trigger: CCGGCCGGCCAACCCCTCCAAGAGCTTCATTGAGGG...GGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGACCTGGGCCCTACCGGAACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp GGTTCCGGTAGGGCCCAGGTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCCGCTGCTTCTCGGTATaGGCCTCGTCCCAACGGCCC +
Preference number: 5 (lower is better)
Translates to: GSGRAQVHNEGARVTRRTRCFSV*ASSQRP
Trigger: GGGCCGTTGGGACGAGGCCAATACCGAGAAGCAGCG...GGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGACCTGGGCCCTACCGGAACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS TCA 90 bp GAAGAGGCAGGGGCTTTAACGCTGGCAGCGATCCTGACTCGGGTCTaGGAAAGGTCGCGCTCCCCACCGCCCGGGAGAGCGGCTCCGATG +
Preference number: 5 (lower is better)
Translates to: EEAGALTLAAILTRV*ERSRSPPPGRAAPM
Trigger: CATCGGAGCCGCTCTCCCGGGCGGTGGGGAGCGCGACCTTTCTCAGACCCGAGTCAGGATCGCTGCCAGCGTTAAAGCCCCTGCCTCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332585.11
ENST00000446658.6
CDS-3UTR CAA 90 bp GGTTCCGGTAGGGCCCAGGTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCTGCGCGGTGGACAGGTaGATGGTTCCACGGCACGTG +
Preference number: 5 (lower is better)
Translates to: GSGRAQVHNEGARVTRRTCAVDR*MVPRHV
Trigger: CACGTGCCGTGGAACCATCAACCTGTCCACCGCGCA...GGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGACCTGGGCCCTACCGGAACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
CDS-3UTR CAA 90 bp AGGAGGGATGCAAGGTCTCTGGTGCCCAGGTCACCAGCCCAGGCTGGGCCAAGGATCACGCGGACAGCCTaGGCCTTGGCCAGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: RRDARSLVPRSPAQAGPRITRTA*ALASSR
Trigger: CCTGGAGCTGGCCAAGGCCAAGGCTGTCCGCGTGAT...CCTTGGCCCAGCCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCATCCCTCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
CDS-3UTR CAA 90 bp GGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAAAGCTCTTGGAGGGGTaGGCCGGCCGGCCAGGGGCA +
Preference number: 5 (lower is better)
Translates to: GAGENPGQPFLLPRWESQKLLEG*AGRPGA
Trigger: TGCCCCTGGCCGGCCGGCCAACCCCTCCAAGAGCTT...TTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp GTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCTGGGGGCTGGAGAGAACCCCCTCAATGAAGCTCTaGGAGGGGTTGGCCGGCCGG +
Preference number: 5 (lower is better)
Translates to: VHNEGARVTRRTWGLERTPSMKL*EGLAGR
Trigger: CCGGCCGGCCAACCCCTCCAAGAGCTTCATTGAGGG...GGTTCTCTCCAGCCCCCAGGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS TCA 90 bp CTTGGCCAGCTCCAGGGCGGTGATCCACTGCTGCCGGTCCACCTCTaGGCTGGCCTTGAGGTGGTAGCTCCTGGCCCCACTGGTCAGCAA +
Preference number: 5 (lower is better)
Translates to: LGQLQGGDPLLPVHL*AGLEVVAPGPTGQQ
Trigger: TTGCTGACCAGTGGGGCCAGGAGCTACCACCTCAAGGCCAGCTCAGAGGTGGACCGGCAGCAGTGGATCACCGCCCTGGAGCTGGCCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000438716.3
ENST00000446658.6
CDS GCA 90 bp GGCAGGACCAGCGTAGGTGCAGACTCTGCCCTGGGCCCCCTGGGGTaGTTAGAGGTGGCTGGTCCTGCTTACCTTCCGGGCTGCCTCTTT +
Preference number: 5 (lower is better)
Translates to: GRTSVGADSALGPLG*LEVAGPAYLPGCLF
Trigger: AAAGAGGCAGCCCGGAAGGTAAGCAGGACCAGCCACCTCTAAGCACCCCAGGGGGCCCAGGGCAGAGTCTGCACCTACGCTGGTCCTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433183.2
ENST00000496575.1
CDS-3UTR CAA 90 bp GGGATGCAAGGTCTCTGGTGCCCAGGTCACCAGCCCAGGCTGGGCCAAGGGTTTTGGTGCAGCTCGCTCTaGTCGGCTGGGGTGGTAGCC +
Preference number: 5 (lower is better)
Translates to: GMQGLWCPGHQPRLGQGFWCSSL*SAGVVA
Trigger: GGCTACCACCCCAGCCGACAAGAGCGAGCTGCACCA...AAACCCTTGGCCCAGCCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCATCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000437268.6
CDS-3UTR CAA 90 bp GGTTCCGGTAGGGCCCAGGTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCAGTGCAGCGCCGTGCTaGGCGATGAGGTCATTGCAC +
Preference number: 5 (lower is better)
Translates to: GSGRAQVHNEGARVTRRTSAAPC*AMRSLH
Trigger: GTGCAATGACCTCATCGCCAAGCACGGCGCTGCACT...GGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGACCTGGGCCCTACCGGAACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000437268.6
CDS-3UTR CAA 90 bp GGGATGCAAGGTCTCTGGTGCCCAGGTCACCAGCCCAGGCTGGGCCAAGGGTTTCCCTCAATGAAGCTCTaGGAGGGGTTGGCCGGCCGG +
Preference number: 5 (lower is better)
Translates to: GMQGLWCPGHQPRLGQGFPSMKL*EGLAGR
Trigger: CCGGCCGGCCAACCCCTCCAAGAGCTTCATTGAGGG...AAACCCTTGGCCCAGCCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCATCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp AGTTCCTCCCTGGGTTGGGGGCTGGTGATTTGCGCAGCCCATGGCCCGGGCCAGATGGGGTTGAAGGGCTaGGCGATGCGGTGCACTGTG +
Preference number: 5 (lower is better)
Translates to: SSSLGWGLVICAAHGPGQMGLKG*AMRCTV
Trigger: CACAGTGCACCGCATCGCCAAGCCCTTCAACCCCAT...CTGGCCCGGGCCATGGGCTGCGCAAATCACCAGCCCCCAACCCAGGGAGGAACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp GGTTCCGGTAGGGCCCAGGTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCATGGGGTTGAAGGGCTaGGCGATGCGGTGCACTGTG +
Preference number: 5 (lower is better)
Translates to: GSGRAQVHNEGARVTRRTMGLKG*AMRCTV
Trigger: CACAGTGCACCGCATCGCCAAGCCCTTCAACCCCAT...GGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGACCTGGGCCCTACCGGAACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp GGGATGCAAGGTCTCTGGTGCCCAGGTCACCAGCCCAGGCTGGGCCAAGGGTTTCCCTCCTCGTGCTCGTaGAGGGTCAGGGCCAGCTCT +
Preference number: 5 (lower is better)
Translates to: GMQGLWCPGHQPRLGQGFPSSCS*RVRASS
Trigger: AGAGCTGGCCCTGACCCTCAACGAGCACGAGGAGGG...AAACCCTTGGCCCAGCCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCATCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS GCA 90 bp CCGCCTCACCGCCTCCACCTCCTGAGCCAGCTGGCCTACGGTTCATaGCAAGGCGCTTCGCTGCCAGTGACGACATCGTTCGGGTTCTCT +
Preference number: 5 (lower is better)
Translates to: PPHRLHLLSQLAYGS*QGASLPVTTSFGFS
Trigger: AGAGAACCCGAACGATGTCGTCACTGGCAGCGAAGCGCCTTGGCATGAACCGTAGGCCAGCTGGCTCAGGAGGTGGAGGCGGTGAGGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403222.7
ENST00000407373.5
ENST00000438716.3
CDS-3UTR CAA 90 bp GGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAATGGTGCAGCTCGCTCTaGTCGGCTGGGGTGGTAGCC +
Preference number: 5 (lower is better)
Translates to: GAGENPGQPFLLPRWESQWCSSL*SAGVVA
Trigger: GGCTACCACCCCAGCCGACAAGAGCGAGCTGCACCA...TTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000437268.6
ENST00000438716.3
CDS-3UTR CAA 90 bp AGTTCCTCCCTGGGTTGGGGGCTGGTGATTTGCGCAGCCCATGGCCCGGGCCAGCTCTCAGATGGGATCTaGAGGCCGTCCAGCTCTGTC +
Preference number: 5 (lower is better)
Translates to: SSSLGWGLVICAAHGPGQLSDGI*RPSSSV
Trigger: GACAGAGCTGGACGGCCTCAAGATCCCATCTGAGAG...CTGGCCCGGGCCATGGGCTGCGCAAATCACCAGCCCCCAACCCAGGGAGGAACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000437268.6
CDS-3UTR CAA 90 bp AGTTCCTCCCTGGGTTGGGGGCTGGTGATTTGCGCAGCCCATGGCCCGGGCCAGTCCAGTCCACGGAACTaGTCCCGGTGCTACCTTCAG +
Preference number: 5 (lower is better)
Translates to: SSSLGWGLVICAAHGPGQSSPRN*SRCYLQ
Trigger: CTGAAGGTAGCACCGGGACAAGTTCCGTGGACTGGA...CTGGCCCGGGCCATGGGCTGCGCAAATCACCAGCCCCCAACCCAGGGAGGAACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp GGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAATCCCCCAGCATGGGGTaGAAGGGCTTGGCGATGCGG +
Preference number: 5 (lower is better)
Translates to: GAGENPGQPFLLPRWESQSPSMG*KGLAMR
Trigger: CCGCATCGCCAAGCCCTTCAACCCCATGCTGGGGGA...TTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp TCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGAGCTCCGCAGGCGGCTGTCGGTaGGCGCTACGCCCTCCTCGT +
Preference number: 5 (lower is better)
Translates to: STWGLPSVPPPASVDGSSAGGCR*ALRPPR
Trigger: ACGAGGAGGGCGTAGCGCCAACCGACAGCCGCCTGC...GGAGCTCCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp GGGCCAAGGGTTTGTTCATTATTGCTGATTTGGGGCCTGGGTCTCAGGGCGGGGGCAGGCGGCTGTCGGTaGGCGCTACGCCCTCCTCGT +
Preference number: 5 (lower is better)
Translates to: GPRVCSLLLIWGLGLRAGAGGCR*ALRPPR
Trigger: ACGAGGAGGGCGTAGCGCCAACCGACAGCCGCCTGC...CCCCGCCCTGAGACCCAGGCCCCAAATCAGCAATAATGAACAAACCCTTGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp TGGGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCCAGCCCCCTTCTGTTTaGGGCTCTGTGGGGCCTTGG +
Preference number: 5 (lower is better)
Translates to: WGLERTQVSPSSFQGGSPQPPSV*GSVGPW
Trigger: CCAAGGCCCCACAGAGCCCAAAACAGAAGGGGGCTG...GGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp AGTTCCTCCCTGGGTTGGGGGCTGGTGATTTGCGCAGCCCATGGCCCGGGCCAGACACAGGTTCCGATCTaGGCACTGCCTCCGAAACTG +
Preference number: 5 (lower is better)
Translates to: SSSLGWGLVICAAHGPGQTQVPI*ALPPKL
Trigger: CAGTTTCGGAGGCAGTGCCAAGATCGGAACCTGTGT...CTGGCCCGGGCCATGGGCTGCGCAAATCACCAGCCCCCAACCCAGGGAGGAACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000332585.11
CDS-3UTR CAA 90 bp GGCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCTGGTGCAGCTCGCTCTaGTCGGCTGGGGTGGTAGCC +
Preference number: 5 (lower is better)
Translates to: GQGLLPSNPHGGYHQYPLWCSSL*SAGVVA
Trigger: GGCTACCACCCCAGCCGACAAGAGCGAGCTGCACCA...GAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000437268.6
CDS-3UTR CAA 90 bp TGGGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAGTGCAGCGCCGTGCTaGGCGATGAGGTCATTGCAC +
Preference number: 5 (lower is better)
Translates to: WGLERTQVSPSSFQGGSPSAAPC*AMRSLH
Trigger: GTGCAATGACCTCATCGCCAAGCACGGCGCTGCACT...GGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000437268.6
ENST00000438716.3
CDS-3UTR CAA 90 bp GCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAGCCCGCTCGAGGCTGTaGTGCTGCTTCGCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: AGENPGQPFLLPRWESQEARSRL*CCFASC
Trigger: GCAGCTGGCGAAGCAGCACAACAGCCTCGAGCGGGC...TTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp CCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAGCCCGCTCGAGGCTGTaGTGCTGCTTCGCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: PGQPFLLPRWESQESVGRARSRL*CCFASC
Trigger: GCAGCTGGCGAAGCAGCACAACAGCCTCGAGCGGGC...TCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp CTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAAAGCTCTTGGAGGGGTaGGCCGGCCGGCCAGGGGCA +
Preference number: 5 (lower is better)
Translates to: LERTQVSPSSFQGGSPKKKLLEG*AGRPGA
Trigger: TGCCCCTGGCCGGCCGGCCAACCCCTCCAAGAGCTT...TTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp CAGGTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCTGGGGGCTGGAGAGAACTTTGGATGAACCCTaGGGCACGAGCGAGGCACCA +
Preference number: 5 (lower is better)
Translates to: QVHNEGARVTRRTWGLERTLDEP*GTSEAP
Trigger: TGGTGCCTCGCTCGTGCCCAAGGGTTCATCCAAAGT...TCTCTCCAGCCCCCAGGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGACCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp AGGAGGGATGCAAGGTCTCTGGTGCCCAGGTCACCAGCCCAGGCTGGGCCAAGGACTTTGGATGAACCCTaGGGCACGAGCGAGGCACCA +
Preference number: 5 (lower is better)
Translates to: RRDARSLVPRSPAQAGPRTLDEP*GTSEAP
Trigger: TGGTGCCTCGCTCGTGCCCAAGGGTTCATCCAAAGT...CCTTGGCCCAGCCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCATCCCTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp GGGATGCAAGGTCTCTGGTGCCCAGGTCACCAGCCCAGGCTGGGCCAAGGGTTTATGGGGTTGAAGGGCTaGGCGATGCGGTGCACTGTG +
Preference number: 5 (lower is better)
Translates to: GMQGLWCPGHQPRLGQGFMGLKG*AMRCTV
Trigger: CACAGTGCACCGCATCGCCAAGCCCTTCAACCCCAT...AAACCCTTGGCCCAGCCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCATCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp GGCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCTCCCCCAGCATGGGGTaGAAGGGCTTGGCGATGCGG +
Preference number: 5 (lower is better)
Translates to: GQGLLPSNPHGGYHQYPLSPSMG*KGLAMR
Trigger: CCGCATCGCCAAGCCCTTCAACCCCATGCTGGGGGA...GAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp GCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTCCCCCAGCATGGGGTaGAAGGGCTTGGCGATGCGG +
Preference number: 5 (lower is better)
Translates to: ARDCCPQIHMGVTISTPSSPSMG*KGLAMR
Trigger: CCGCATCGCCAAGCCCTTCAACCCCATGCTGGGGGA...GGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp GGTTCCGGTAGGGCCCAGGTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCCTTGGAGCACTCCATTaGTTCATCCCACGAGCCGGA +
Preference number: 5 (lower is better)
Translates to: GSGRAQVHNEGARVTRRTLGALH*FIPRAG
Trigger: TCCGGCTCGTGGGATGAACAAATGGAGTGCTCCAAG...GGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGACCTGGGCCCTACCGGAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000535268.5
CDS-3UTR CAA 90 bp CCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGCGCTGCTTCTCGGTATaGGCCTCGTCCCAACGGCCC +
Preference number: 5 (lower is better)
Translates to: PRSALPPSKVGVPRKCGERCFSV*ASSQRP
Trigger: GGGCCGTTGGGACGAGGCCAATACCGAGAAGCAGCG...CTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp GGTTCCGGTAGGGCCCAGGTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCGCACATATGCCAGTCTaGCTTCTCCTTGGCCTCCCA +
Preference number: 5 (lower is better)
Translates to: GSGRAQVHNEGARVTRRTAHMPV*LLLGLP
Trigger: TGGGAGGCCAAGGAGAAGCAAGACTGGCATATGTGC...GGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGACCTGGGCCCTACCGGAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp GTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCTGGGGGCTGGAGAGAACCTGCAGGCGCCTGTATTaGTTGCAAGGGTGGCGCTCA +
Preference number: 5 (lower is better)
Translates to: VHNEGARVTRRTWGLERTCRRLY*LQGWRS
Trigger: TGAGCGCCACCCTTGCAACAAATACAGGCGCCTGCA...GGTTCTCTCCAGCCCCCAGGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp AGTTCCTCCCTGGGTTGGGGGCTGGTGATTTGCGCAGCCCATGGCCCGGGCCAGTCACTGTCCTCTCCTTaGGGAGTCAAGAGGTCACCC +
Preference number: 5 (lower is better)
Translates to: SSSLGWGLVICAAHGPGQSLSSP*GVKRSP
Trigger: GGGTGACCTCTTGACTCCCAAAGGAGAGGACAGTGA...CTGGCCCGGGCCATGGGCTGCGCAAATCACCAGCCCCCAACCCAGGGAGGAACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403222.7
CDS GCA 90 bp GAGAAGGCGGCCACCAGGCACATCTGCTCCACTGAGCTGGTGCAGTaGACTGCCTTGTCCAGCAGGTGGTGGTACTCCAGGTCCTCTGTC +
Preference number: 5 (lower is better)
Translates to: EKAATRHICSTELVQ*TALSSRWWYSRSSV
Trigger: GACAGAGGACCTGGAGTACCACCACCTGCTGGACAAGGCAGTGCACTGCACCAGCTCAGTGGAGCAGATGTGCCTGGTGGCCGCCTTCTC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000446658.6
ENST00000452656.5
ENST00000453621.5
ENST00000535268.5
CDS GCA 90 bp AGACTCTGCCCTGGGCCCCCTGGGGTGCTTAGAGGTGGCTGGTCCTaGTTACCTTCCGGGCTGCCTCTTTGGAGAAGTAGCTGTAGGGCA +
Preference number: 5 (lower is better)
Translates to: RLCPGPPGVLRGGWS*LPSGLPLWRSSCRA
Trigger: TGCCCTACAGCTACTTCTCCAAAGAGGCAGCCCGGAAGGTAAGCAGGACCAGCCACCTCTAAGCACCCCAGGGGGCCCAGGGCAGAGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433183.2
ENST00000496575.1
CDS CCA 90 bp CAGGGAAAGATTCTTCAGGGTGTGGTGCAGCTCGCTCTTGTCGGCTaGGGTGGTAGCCTCGTCGTCGTCCCCAGAGTCATCCCAGGGAGG +
Preference number: 5 (lower is better)
Translates to: QGKILQGVVQLALVG*GGSLVVVPRVIPGR
Trigger: CCTCCCTGGGATGACTCTGGGGACGACGACGAGGCTACCACCCCAGCCGACAAGAGCGAGCTGCACCACACCCTGAAGAATCTTTCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424224.5
CDS CCA 90 bp AGGTGCAGACTCTGCCCTGGGCCCCCTGGGGTGCTTAGAGGTGGCTaGTCCTGCTTACCTTCCGGGCTGCCTCTTTGGAGAAGTAGCTGT +
Preference number: 5 (lower is better)
Translates to: RCRLCPGPPGVLRGG*SCLPSGLPLWRSSC
Trigger: ACAGCTACTTCTCCAAAGAGGCAGCCCGGAAGGTAAGCAGGACCAGCCACCTCTAAGCACCCCAGGGGGCCCAGGGCAGAGTCTGCACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433183.2
ENST00000496575.1
CDS-3UTR CAA 90 bp GGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAAAAAGCTCTTGGAGGGGTaGGCCGGCCGGCCAGGGGCA +
Preference number: 5 (lower is better)
Translates to: GQPFLLPRWESQESVGRKKLLEG*AGRPGA
Trigger: TGCCCCTGGCCGGCCGGCCAACCCCTCCAAGAGCTT...TTTTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp GCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAACCCTCAATGAAGCTCTaGGAGGGGTTGGCCGGCCGG +
Preference number: 5 (lower is better)
Translates to: AGENPGQPFLLPRWESQEPSMKL*EGLAGR
Trigger: CCGGCCGGCCAACCCCTCCAAGAGCTTCATTGAGGG...TTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp CCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGACCCTCAATGAAGCTCTaGGAGGGGTTGGCCGGCCGG +
Preference number: 5 (lower is better)
Translates to: PGQPFLLPRWESQESVGRPSMKL*EGLAGR
Trigger: CCGGCCGGCCAACCCCTCCAAGAGCTTCATTGAGGG...TCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp GGGCCAAGGGTTTGTTCATTATTGCTGATTTGGGGCCTGGGTCTCAGGGCGGGGCCCTCAATGAAGCTCTaGGAGGGGTTGGCCGGCCGG +
Preference number: 5 (lower is better)
Translates to: GPRVCSLLLIWGLGLRAGPSMKL*EGLAGR
Trigger: CCGGCCGGCCAACCCCTCCAAGAGCTTCATTGAGGG...CCCCGCCCTGAGACCCAGGCCCCAAATCAGCAATAATGAACAAACCCTTGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp CAGGTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCTGGGGGCTGGAGAGATCACTGTCCTCTCCTTaGGGAGTCAAGAGGCTTCCC +
Preference number: 5 (lower is better)
Translates to: QVHNEGARVTRRTWGLERSLSSP*GVKRLP
Trigger: GGGAAGCCTCTTGACTCCCAAAGGAGAGGACAGTGA...TCTCTCCAGCCCCCAGGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGACCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp CTTGGCCTCCCAGTAGCCGCCCTTGTACACACAGGCCATCTCCCCGGTCAGCGGTCACTGTCCTCTCCTTaGGGAGTCAAGAGGCTTCCC +
Preference number: 5 (lower is better)
Translates to: LGLPVAALVHTGHLPGQRSLSSP*GVKRLP
Trigger: GGGAAGCCTCTTGACTCCCAAAGGAGAGGACAGTGA...CCGCTGACCGGGGAGATGGCCTGTGTGTACAAGGGCGGCTACTGGGAGGCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452656.5
CDS-3UTR CAA 90 bp TGGGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCTCCAGTCCACGGAACTaGTCCCGGTGCTACCTTCAG +
Preference number: 5 (lower is better)
Translates to: WGLERTQVSPSSFQGGSPSSPRN*SRCYLQ
Trigger: CTGAAGGTAGCACCGGGACAAGTTCCGTGGACTGGA...GGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp GGTTCCGGTAGGGCCCAGGTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCGCACCATCTAGTACATaGTCTGCTGAGCTCCAGTCC +
Preference number: 5 (lower is better)
Translates to: GSGRAQVHNEGARVTRRTAPSST*SAELQS
Trigger: GGACTGGAGCTCAGCAGACAATGTACTAGATGGTGC...GGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGACCTGGGCCCTACCGGAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp AGTTCCTCCCTGGGTTGGGGGCTGGTGATTTGCGCAGCCCATGGCCCGGGCCAGATGCGGACTCGCCTCTaGACTTTGGATGAACCCTTG +
Preference number: 5 (lower is better)
Translates to: SSSLGWGLVICAAHGPGQMRTRL*TLDEPL
Trigger: CAAGGGTTCATCCAAAGTCAAGAGGCGAGTCCGCAT...CTGGCCCGGGCCATGGGCTGCGCAAATCACCAGCCCCCAACCCAGGGAGGAACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp CCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGATCCCCCAGCATGGGGTaGAAGGGCTTGGCGATGCGG +
Preference number: 5 (lower is better)
Translates to: PGQPFLLPRWESQESVGRSPSMG*KGLAMR
Trigger: CCGCATCGCCAAGCCCTTCAACCCCATGCTGGGGGA...TCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp GGGCCAAGGGTTTGTTCATTATTGCTGATTTGGGGCCTGGGTCTCAGGGCGGGGTCCCCCAGCATGGGGTaGAAGGGCTTGGCGATGCGG +
Preference number: 5 (lower is better)
Translates to: GPRVCSLLLIWGLGLRAGSPSMG*KGLAMR
Trigger: CCGCATCGCCAAGCCCTTCAACCCCATGCTGGGGGA...CCCCGCCCTGAGACCCAGGCCCCAAATCAGCAATAATGAACAAACCCTTGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp CAGGTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCTGGGGGCTGGAGAGATTCTTCCACAGCAGCTaGGCTGACAGGGTCTGGTAC +
Preference number: 5 (lower is better)
Translates to: QVHNEGARVTRRTWGLERFFHSS*ADRVWY
Trigger: GTACCAGACCCTGTCAGCCAAGCTGCTGTGGAAGAA...TCTCTCCAGCCCCCAGGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGACCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000535268.5
CDS-3UTR CAA 90 bp GTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCTGGGGGCTGGAGAGAACCTTCTTCCACAGCAGCTaGGCTGACAGGGTCTGGTAC +
Preference number: 5 (lower is better)
Translates to: VHNEGARVTRRTWGLERTFFHSS*ADRVWY
Trigger: GTACCAGACCCTGTCAGCCAAGCTGCTGTGGAAGAA...GGTTCTCTCCAGCCCCCAGGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000535268.5
CDS-3UTR CAA 90 bp GGGCCAAGGGTTTGTTCATTATTGCTGATTTGGGGCCTGGGTCTCAGGGCGGGGCCCTCCTCGTGCTCGTaGAGGGTCAGGGCCAGCTCT +
Preference number: 5 (lower is better)
Translates to: GPRVCSLLLIWGLGLRAGPSSCS*RVRASS
Trigger: AGAGCTGGCCCTGACCCTCAACGAGCACGAGGAGGG...CCCCGCCCTGAGACCCAGGCCCCAAATCAGCAATAATGAACAAACCCTTGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp TCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGAGCTCCCCCTCCTCGTGCTCGTaGAGGGTCAGGGCCAGCTCT +
Preference number: 5 (lower is better)
Translates to: STWGLPSVPPPASVDGSSPSSCS*RVRASS
Trigger: AGAGCTGGCCCTGACCCTCAACGAGCACGAGGAGGG...GGAGCTCCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp TCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGAGCTCCCGCTGCTTCTCGGTATaGGCCTCGTCCCAACGGCCC +
Preference number: 5 (lower is better)
Translates to: STWGLPSVPPPASVDGSSRCFSV*ASSQRP
Trigger: GGGCCGTTGGGACGAGGCCAATACCGAGAAGCAGCG...GGAGCTCCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp GGGCCAAGGGTTTGTTCATTATTGCTGATTTGGGGCCTGGGTCTCAGGGCGGGGCGCTGCTTCTCGGTATaGGCCTCGTCCCAACGGCCC +
Preference number: 5 (lower is better)
Translates to: GPRVCSLLLIWGLGLRAGRCFSV*ASSQRP
Trigger: GGGCCGTTGGGACGAGGCCAATACCGAGAAGCAGCG...CCCCGCCCTGAGACCCAGGCCCCAAATCAGCAATAATGAACAAACCCTTGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp GGGATGCAAGGTCTCTGGTGCCCAGGTCACCAGCCCAGGCTGGGCCAAGGGTTTTGCAGGCGCCTGTATTaGTTGCAAGGGTGGCGCTCA +
Preference number: 5 (lower is better)
Translates to: GMQGLWCPGHQPRLGQGFCRRLY*LQGWRS
Trigger: TGAGCGCCACCCTTGCAACAAATACAGGCGCCTGCA...AAACCCTTGGCCCAGCCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCATCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp GCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCCAGCCCCCTTCTGTTTaGGGCTCTGTGGGGCCTTGG +
Preference number: 5 (lower is better)
Translates to: ARDCCPQIHMGVTISTPSQPPSV*GSVGPW
Trigger: CCAAGGCCCCACAGAGCCCAAAACAGAAGGGGGCTG...GGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp GGCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCAGCCCCCTTCTGTTTaGGGCTCTGTGGGGCCTTGG +
Preference number: 5 (lower is better)
Translates to: GQGLLPSNPHGGYHQYPLQPPSV*GSVGPW
Trigger: CCAAGGCCCCACAGAGCCCAAAACAGAAGGGGGCTG...GAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp GGTTCCGGTAGGGCCCAGGTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCTTCATTATTGCTGATTaGGGGCCTGGGTCTCAGGGC +
Preference number: 5 (lower is better)
Translates to: GSGRAQVHNEGARVTRRTFIIAD*GPGSQG
Trigger: GCCCTGAGACCCAGGCCCCAAATCAGCAATAATGAA...GGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGACCTGGGCCCTACCGGAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp AGTTCCTCCCTGGGTTGGGGGCTGGTGATTTGCGCAGCCCATGGCCCGGGCCAGTTCATTATTGCTGATTaGGGGCCTGGGTCTCAGGGC +
Preference number: 5 (lower is better)
Translates to: SSSLGWGLVICAAHGPGQFIIAD*GPGSQG
Trigger: GCCCTGAGACCCAGGCCCCAAATCAGCAATAATGAA...CTGGCCCGGGCCATGGGCTGCGCAAATCACCAGCCCCCAACCCAGGGAGGAACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS TCA 90 bp GTAGGAGGACACAGAGAAGGCGGCCACCAGGCACATCTGCTCCACTaGGCTGGTGCAGTGCACTGCCTTGTCCAGCAGGTGGTGGTACTC +
Preference number: 5 (lower is better)
Translates to: VGGHREGGHQAHLLH*AGAVHCLVQQVVVL
Trigger: GAGTACCACCACCTGCTGGACAAGGCAGTGCACTGCACCAGCTCAGTGGAGCAGATGTGCCTGGTGGCCGCCTTCTCTGTGTCCTCCTAC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000446658.6
ENST00000452656.5
ENST00000453621.5
ENST00000535268.5
CDS TCA 90 bp CTCCGCGTTCTCCGGCAGCGGGTACTTCTTCCACAGCAGCTTGGCTaGCAGGGTCTGGTACACTGTCTTCTGCTTCCCGTCAGAGCTGGG +
Preference number: 5 (lower is better)
Translates to: LRVLRQRVLLPQQLG*QGLVHCLLLPVRAG
Trigger: CCCAGCTCTGACGGGAAGCAGAAGACAGTGTACCAGACCCTGTCAGCCAAGCTGCTGTGGAAGAAGTACCCGCTGCCGGAGAACGCGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000446658.6
ENST00000535268.5
CDS GCA 90 bp ACACAGAGAAGGCGGCCACCAGGCACATCTGCTCCACTGAGCTGGTaGAGTGCACTGCCTTGTCCAGCAGGTGGTGGTACTCCAGGTCCT +
Preference number: 5 (lower is better)
Translates to: TQRRRPPGTSAPLSW*SALPCPAGGGTPGP
Trigger: AGGACCTGGAGTACCACCACCTGCTGGACAAGGCAGTGCACTGCACCAGCTCAGTGGAGCAGATGTGCCTGGTGGCCGCCTTCTCTGTGT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000446658.6
ENST00000452656.5
ENST00000453621.5
ENST00000535268.5
CDS CCA 90 bp TCCGGCAGCGGGTACTTCTTCCACAGCAGCTTGGCTGACAGGGTCTaGTACACTGTCTTCTGCTTCCCGTCAGAGCTGGGGCTGCTGGGA +
Preference number: 5 (lower is better)
Translates to: SGSGYFFHSSLADRV*YTVFCFPSELGLLG
Trigger: TCCCAGCAGCCCCAGCTCTGACGGGAAGCAGAAGACAGTGTACCAGACCCTGTCAGCCAAGCTGCTGTGGAAGAAGTACCCGCTGCCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000446658.6
ENST00000535268.5
CDS-3UTR CAA 90 bp CAGGTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCTGGGGGCTGGAGAGATTGGCGATGAGGTCATaGCACGTGCTGAGGTCATCT +
Preference number: 5 (lower is better)
Translates to: QVHNEGARVTRRTWGLERLAMRS*HVLRSS
Trigger: AGATGACCTCAGCACGTGCAATGACCTCATCGCCAA...TCTCTCCAGCCCCCAGGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000437268.6
CDS-3UTR CAA 90 bp GGCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCAGTGCAGCGCCGTGCTaGGCGATGAGGTCATTGCAC +
Preference number: 5 (lower is better)
Translates to: GQGLLPSNPHGGYHQYPLSAAPC*AMRSLH
Trigger: GTGCAATGACCTCATCGCCAAGCACGGCGCTGCACT...GAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000437268.6
CDS-3UTR CAA 90 bp GGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAACTCTCAGATGGGATCTaGAGGCCGTCCAGCTCTGTC +
Preference number: 5 (lower is better)
Translates to: GAGENPGQPFLLPRWESQLSDGI*RPSSSV
Trigger: GACAGAGCTGGACGGCCTCAAGATCCCATCTGAGAG...TTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000437268.6
ENST00000438716.3
CDS-3UTR CAA 90 bp GGTTCCGGTAGGGCCCAGGTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCGCGTTGATCATAGCATaGGATGTGATGCGGAAGAGG +
Preference number: 5 (lower is better)
Translates to: GSGRAQVHNEGARVTRRTALIIA*DVMRKR
Trigger: CCTCTTCCGCATCACATCCAATGCTATGATCAACGC...GGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGACCTGGGCCCTACCGGAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000437268.6
CDS-3UTR CAA 90 bp GGTTCCGGTAGGGCCCAGGTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCAAGTCCCTGCAGGCGTaGATCATAGCATTGGATGTG +
Preference number: 5 (lower is better)
Translates to: GSGRAQVHNEGARVTRRTKSLQA*IIALDV
Trigger: CACATCCAATGCTATGATCAACGCCTGCAGGGACTT...GGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGACCTGGGCCCTACCGGAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000437268.6
CDS-3UTR CAA 90 bp CCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGCCCGCTCGAGGCTGTaGTGCTGCTTCGCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: PQIHMGVTISTPSCICGWARSRL*CCFASC
Trigger: GCAGCTGGCGAAGCAGCACAACAGCCTCGAGCGGGC...CCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp GGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAACTTTGGATGAACCCTaGGGCACGAGCGAGGCACCA +
Preference number: 5 (lower is better)
Translates to: GAGENPGQPFLLPRWESQTLDEP*GTSEAP
Trigger: TGGTGCCTCGCTCGTGCCCAAGGGTTCATCCAAAGT...TTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp TGGGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCACTCGCCTCTTGACTTaGGATGAACCCTTGGGCACG +
Preference number: 5 (lower is better)
Translates to: WGLERTQVSPSSFQGGSPTRLLT*DEPLGT
Trigger: CGTGCCCAAGGGTTCATCCAAAGTCAAGAGGCGAGT...GGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp CAGGTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCTGGGGGCTGGAGAGAATGCGGACTCGCCTCTaGACTTTGGATGAACCCTTG +
Preference number: 5 (lower is better)
Translates to: QVHNEGARVTRRTWGLERMRTRL*TLDEPL
Trigger: CAAGGGTTCATCCAAAGTCAAGAGGCGAGTCCGCAT...TCTCTCCAGCCCCCAGGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp GCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCATGGGGTTGAAGGGCTaGGCGATGCGGTGCACTGTG +
Preference number: 5 (lower is better)
Translates to: ARDCCPQIHMGVTISTPSMGLKG*AMRCTV
Trigger: CACAGTGCACCGCATCGCCAAGCCCTTCAACCCCAT...GGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp AGTTCCTCCCTGGGTTGGGGGCTGGTGATTTGCGCAGCCCATGGCCCGGGCCAGTATTTTCCCCGGAACTaGCTGGAGATGGTGATCTCC +
Preference number: 5 (lower is better)
Translates to: SSSLGWGLVICAAHGPGQYFPRN*LEMVIS
Trigger: GGAGATCACCATCTCCAGCAAGTTCCGGGGAAAATA...CTGGCCCGGGCCATGGGCTGCGCAAATCACCAGCCCCCAACCCAGGGAGGAACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp GGACATTGGCAGGACCAGCGTAGGTGCAGACTCTGCCCTGGGCCCCCTGGGGTGAGCTGGCACCGGTCATaGGTCTTATGGTTCACAATC +
Preference number: 5 (lower is better)
Translates to: GHWQDQRRCRLCPGPPGVSWHRS*VLWFTI
Trigger: GATTGTGAACCATAAGACCAATGACCGGTGCCAGCT...CACCCCAGGGGGCCCAGGGCAGAGTCTGCACCTACGCTGGTCCTGCCAATGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433183.2
CDS-3UTR CAA 90 bp GGGCCAGCCGGCCTGAGTTGTGGTAACTGGGGCAGGGGTTCCGGTAGGGCCCAGCTGCTATGCATGACCTaGGAGCACTCCATTTGTTCA +
Preference number: 5 (lower is better)
Translates to: GPAGLSCGNWGRGSGRAQLLCMT*EHSICS
Trigger: TGAACAAATGGAGTGCTCCAAGGTCATGCATAGCAG...CTGGGCCCTACCGGAACCCCTGCCCCAGTTACCACAACTCAGGCCGGCTGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000535268.5
CDS-3UTR CAA 90 bp TGGGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCTTCTTCCACAGCAGCTaGGCTGACAGGGTCTGGTAC +
Preference number: 5 (lower is better)
Translates to: WGLERTQVSPSSFQGGSPFFHSS*ADRVWY
Trigger: GTACCAGACCCTGTCAGCCAAGCTGCTGTGGAAGAA...GGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000535268.5
CDS-3UTR CAA 90 bp CTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAACCCTCCTCGTGCTCGTaGAGGGTCAGGGCCAGCTCT +
Preference number: 5 (lower is better)
Translates to: LERTQVSPSSFQGGSPKKPSSCS*RVRASS
Trigger: AGAGCTGGCCCTGACCCTCAACGAGCACGAGGAGGG...TTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp GGGATGCAAGGTCTCTGGTGCCCAGGTCACCAGCCCAGGCTGGGCCAAGGGTTTGCACATATGCCAGTCTaGCTTCTCCTTGGCCTCCCA +
Preference number: 5 (lower is better)
Translates to: GMQGLWCPGHQPRLGQGFAHMPV*LLLGLP
Trigger: TGGGAGGCCAAGGAGAAGCAAGACTGGCATATGTGC...AAACCCTTGGCCCAGCCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCATCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp TGGGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAGGCGCCTGTATTTGTaGCAAGGGTGGCGCTCAGAA +
Preference number: 5 (lower is better)
Translates to: WGLERTQVSPSSFQGGSPRRLYL*QGWRSE
Trigger: TTCTGAGCGCCACCCTTGCAACAAATACAGGCGCCT...GGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS GCA 90 bp ACTCCATTTGTTCATCCCACGAGCCGGACAGCACGTAATGGGCCTTaGCCTGGCTGTCACTCACCACTCCTGTCACCTTCCGGGCTGCCT +
Preference number: 5 (lower is better)
Translates to: TPFVHPTSRTARNGP*PGCHSPLLSPSGLP
Trigger: AGGCAGCCCGGAAGGTGACAGGAGTGGTGAGTGACAGCCAGGGCAAGGCCCATTACGTGCTGTCCGGCTCGTGGGATGAACAAATGGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000446658.6
ENST00000535268.5
CDS GCA 90 bp CCCCTGGGGTGCTTAGAGGTGGCTGGTCCTGCTTACCTTCCGGGCTaGCTCTTTGGAGAAGTAGCTGTAGGGCAGGAACTTCAGCTGGCA +
Preference number: 5 (lower is better)
Translates to: PLGCLEVAGPAYLPG*LFGEVAVGQELQLA
Trigger: TGCCAGCTGAAGTTCCTGCCCTACAGCTACTTCTCCAAAGAGGCAGCCCGGAAGGTAAGCAGGACCAGCCACCTCTAAGCACCCCAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433183.2
ENST00000496575.1
CDS CCA 90 bp CAGGGAAAGATTCTTCAGGGTGTGGTGCAGCTCGCTCTTGTCGGCTaGGGTGGTAGCCTCGTCGTCGTCCCCAGAGTCATCTCTCCCCTT +
Preference number: 5 (lower is better)
Translates to: QGKILQGVVQLALVG*GGSLVVVPRVISPL
Trigger: AAGGGGAGAGATGACTCTGGGGACGACGACGAGGCTACCACCCCAGCCGACAAGAGCGAGCTGCACCACACCCTGAAGAATCTTTCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000445781.5
ENST00000496367.1
CDS CCA 90 bp CAGGGAAAGATTCTTCAGGGTGTGGTGCAGCTCGCTCTTGTCGGCTaGGGTGGTAGCCTCGTCGTCGTCCCCAGAGTCATCTGTAAGCCC +
Preference number: 5 (lower is better)
Translates to: QGKILQGVVQLALVG*GGSLVVVPRVICKP
Trigger: GGGCTTACAGATGACTCTGGGGACGACGACGAGGCTACCACCCCAGCCGACAAGAGCGAGCTGCACCACACCCTGAAGAATCTTTCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477355.5
CDS-3UTR CAA 90 bp CCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGTGCCAGTCCCCGACATaGGAACCCCAAGAGGAGTCT +
Preference number: 5 (lower is better)
Translates to: PRSALPPSKVGVPRKCGECQSPT*EPQEES
Trigger: AGACTCCTCTTGGGGTTCCAATGTCGGGGACTGGCA...CTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332585.11
CDS-3UTR CAA 90 bp CCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGTGGTGCAGCTCGCTCTaGTCGGCTGGGGTGGTAGCC +
Preference number: 5 (lower is better)
Translates to: PQIHMGVTISTPSCICGWWCSSL*SAGVVA
Trigger: GGCTACCACCCCAGCCGACAAGAGCGAGCTGCACCA...CCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000437268.6
CDS-3UTR CAA 90 bp CCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGCTCTCAGATGGGATCTaGAGGCCGTCCAGCTCTGTC +
Preference number: 5 (lower is better)
Translates to: PRSALPPSKVGVPRKCGELSDGI*RPSSSV
Trigger: GACAGAGCTGGACGGCCTCAAGATCCCATCTGAGAG...CTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000437268.6
ENST00000438716.3
CDS-3UTR CAA 90 bp AGGAGGGATGCAAGGTCTCTGGTGCCCAGGTCACCAGCCCAGGCTGGGCCAAGGGCGTTGATCATAGCATaGGATGTGATGCGGAAGAGG +
Preference number: 5 (lower is better)
Translates to: RRDARSLVPRSPAQAGPRALIIA*DVMRKR
Trigger: CCTCTTCCGCATCACATCCAATGCTATGATCAACGC...CCTTGGCCCAGCCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCATCCCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000437268.6
CDS-3UTR CAA 90 bp CAGGTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCTGGGGGCTGGAGAGAAAGTCCCTGCAGGCGTaGATCATAGCATTGGATGTG +
Preference number: 5 (lower is better)
Translates to: QVHNEGARVTRRTWGLERKSLQA*IIALDV
Trigger: CACATCCAATGCTATGATCAACGCCTGCAGGGACTT...TCTCTCCAGCCCCCAGGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGACCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000437268.6
CDS-3UTR CAA 90 bp GTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAAAAGCCCGCTCGAGGCTGTaGTGCTGCTTCGCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: VSPSSFQGGSPKKVWGEKARSRL*CCFASC
Trigger: GCAGCTGGCGAAGCAGCACAACAGCCTCGAGCGGGC...TTTTTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp GGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAAACCCTCAATGAAGCTCTaGGAGGGGTTGGCCGGCCGG +
Preference number: 5 (lower is better)
Translates to: GQPFLLPRWESQESVGRKPSMKL*EGLAGR
Trigger: CCGGCCGGCCAACCCCTCCAAGAGCTTCATTGAGGG...TTTTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp CCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGCCCTCAATGAAGCTCTaGGAGGGGTTGGCCGGCCGG +
Preference number: 5 (lower is better)
Translates to: PQIHMGVTISTPSCICGWPSMKL*EGLAGR
Trigger: CCGGCCGGCCAACCCCTCCAAGAGCTTCATTGAGGG...CCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp GGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAATCACTGTCCTCTCCTTaGGGAGTCAAGAGGCTTCCC +
Preference number: 5 (lower is better)
Translates to: GAGENPGQPFLLPRWESQSLSSP*GVKRLP
Trigger: GGGAAGCCTCTTGACTCCCAAAGGAGAGGACAGTGA...TTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp TGGGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCGCACCATCTAGTACATaGTCTGCTGAGCTCCAGTCC +
Preference number: 5 (lower is better)
Translates to: WGLERTQVSPSSFQGGSPAPSST*SAELQS
Trigger: GGACTGGAGCTCAGCAGACAATGTACTAGATGGTGC...GGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp TGGGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCATGCGGACTCGCCTCTaGACTTTGGATGAACCCTTG +
Preference number: 5 (lower is better)
Translates to: WGLERTQVSPSSFQGGSPMRTRL*TLDEPL
Trigger: CAAGGGTTCATCCAAAGTCAAGAGGCGAGTCCGCAT...GGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp CCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGATGGACAGGGGCTCATaGAAGTTCACCGGCATGGGG +
Preference number: 5 (lower is better)
Translates to: PRSALPPSKVGVPRKCGEMDRGS*KFTGMG
Trigger: CCCCATGCCGGTGAACTTCAATGAGCCCCTGTCCAT...CTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp GGCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCATGGACAGGGGCTCATaGAAGTTCACCGGCATGGGG +
Preference number: 5 (lower is better)
Translates to: GQGLLPSNPHGGYHQYPLMDRGS*KFTGMG
Trigger: CCCCATGCCGGTGAACTTCAATGAGCCCCTGTCCAT...GAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp GCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAATGGGGTTGAAGGGCTaGGCGATGCGGTGCACTGTG +
Preference number: 5 (lower is better)
Translates to: AGENPGQPFLLPRWESQEMGLKG*AMRCTV
Trigger: CACAGTGCACCGCATCGCCAAGCCCTTCAACCCCAT...TTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp GGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAATTCTTCCACAGCAGCTaGGCTGACAGGGTCTGGTAC +
Preference number: 5 (lower is better)
Translates to: GAGENPGQPFLLPRWESQFFHSS*ADRVWY
Trigger: GTACCAGACCCTGTCAGCCAAGCTGCTGTGGAAGAA...TTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000535268.5
CDS-3UTR CAA 90 bp GGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAAACGCTGCTTCTCGGTATaGGCCTCGTCCCAACGGCCC +
Preference number: 5 (lower is better)
Translates to: GQPFLLPRWESQESVGRKRCFSV*ASSQRP
Trigger: GGGCCGTTGGGACGAGGCCAATACCGAGAAGCAGCG...TTTTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp GGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGCACATATGCCAGTCTaGCTTCTCCTTGGCCTCCCA +
Preference number: 5 (lower is better)
Translates to: GAGENPGQPFLLPRWESQAHMPV*LLLGLP
Trigger: TGGGAGGCCAAGGAGAAGCAAGACTGGCATATGTGC...TTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp GGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAAGGCGCCTGTATTTGTaGCAAGGGTGGCGCTCAGAA +
Preference number: 5 (lower is better)
Translates to: GAGENPGQPFLLPRWESQRRLYL*QGWRSE
Trigger: TTCTGAGCGCCACCCTTGCAACAAATACAGGCGCCT...TTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp GCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGCAGGCGCCTGTATTaGTTGCAAGGGTGGCGCTCA +
Preference number: 5 (lower is better)
Translates to: ARDCCPQIHMGVTISTPSCRRLY*LQGWRS
Trigger: TGAGCGCCACCCTTGCAACAAATACAGGCGCCTGCA...GGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp AGTTCCTCCCTGGGTTGGGGGCTGGTGATTTGCGCAGCCCATGGCCCGGGCCAGCTTGCCAGGACACTTTaGTGGCAAGAAAGCACACTT +
Preference number: 5 (lower is better)
Translates to: SSSLGWGLVICAAHGPGQLARTL*WQESTL
Trigger: AAGTGTGCTTTCTTGCCACAAAAGTGTCCTGGCAAG...CTGGCCCGGGCCATGGGCTGCGCAAATCACCAGCCCCCAACCCAGGGAGGAACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp AGTTCCTCCCTGGGTTGGGGGCTGGTGATTTGCGCAGCCCATGGCCCGGGCCAGAGGGTTTGTTCATTATaGCTGATTTGGGGCCTGGGT +
Preference number: 5 (lower is better)
Translates to: SSSLGWGLVICAAHGPGQRVCSL*LIWGLG
Trigger: ACCCAGGCCCCAAATCAGCAATAATGAACAAACCCT...CTGGCCCGGGCCATGGGCTGCGCAAATCACCAGCCCCCAACCCAGGGAGGAACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp CTGCCTTCACACTGGGATGTCGGCTGCATAATACTGTTCTCTGCCCATGTGTGGCTCCTTCCCTCTCCTTaGCCTGTGGCGGGGCCCCTG +
Preference number: 5 (lower is better)
Translates to: LPSHWDVGCIILFSAHVWLLPSP*PVAGPL
Trigger: CAGGGGCCCCGCCACAGGCAAAGGAGAGGGAAGGAG...CCACACATGGGCAGAGAACAGTATTATGCAGCCGACATCCCAGTGTGAAGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433183.2
CDS-3UTR CAA 90 bp TGGGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGTCCCTGCAGGCGTaGATCATAGCATTGGATGTG +
Preference number: 5 (lower is better)
Translates to: WGLERTQVSPSSFQGGSPKSLQA*IIALDV
Trigger: CACATCCAATGCTATGATCAACGCCTGCAGGGACTT...GGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000437268.6
ENST00000438716.3
CDS-3UTR CAA 90 bp TCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGAGCTCCTCCAGTCCACGGAACTaGTCCCGGTGCTACCTTCAG +
Preference number: 5 (lower is better)
Translates to: STWGLPSVPPPASVDGSSSSPRN*SRCYLQ
Trigger: CTGAAGGTAGCACCGGGACAAGTTCCGTGGACTGGA...GGAGCTCCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp CCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGATCCAGTCCACGGAACTaGTCCCGGTGCTACCTTCAG +
Preference number: 5 (lower is better)
Translates to: PGQPFLLPRWESQESVGRSSPRN*SRCYLQ
Trigger: CTGAAGGTAGCACCGGGACAAGTTCCGTGGACTGGA...TCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp GCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAACTTTGGATGAACCCTaGGGCACGAGCGAGGCACCA +
Preference number: 5 (lower is better)
Translates to: AGENPGQPFLLPRWESQETLDEP*GTSEAP
Trigger: TGGTGCCTCGCTCGTGCCCAAGGGTTCATCCAAAGT...TTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp TCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGAGCTCCACTTTGGATGAACCCTaGGGCACGAGCGAGGCACCA +
Preference number: 5 (lower is better)
Translates to: STWGLPSVPPPASVDGSSTLDEP*GTSEAP
Trigger: TGGTGCCTCGCTCGTGCCCAAGGGTTCATCCAAAGT...GGAGCTCCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp CCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGACTCGCCTCTTGACTTaGGATGAACCCTTGGGCACG +
Preference number: 5 (lower is better)
Translates to: PRSALPPSKVGVPRKCGETRLLT*DEPLGT
Trigger: CGTGCCCAAGGGTTCATCCAAAGTCAAGAGGCGAGT...CTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp GGCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCACTCGCCTCTTGACTTaGGATGAACCCTTGGGCACG +
Preference number: 5 (lower is better)
Translates to: GQGLLPSNPHGGYHQYPLTRLLT*DEPLGT
Trigger: CGTGCCCAAGGGTTCATCCAAAGTCAAGAGGCGAGT...GAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp GCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAATGGACAGGGGCTCATaGAAGTTCACCGGCATGGGG +
Preference number: 5 (lower is better)
Translates to: AGENPGQPFLLPRWESQEMDRGS*KFTGMG
Trigger: CCCCATGCCGGTGAACTTCAATGAGCCCCTGTCCAT...TTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp GGGCCAAGGGTTTGTTCATTATTGCTGATTTGGGGCCTGGGTCTCAGGGCGGGGATGGACAGGGGCTCATaGAAGTTCACCGGCATGGGG +
Preference number: 5 (lower is better)
Translates to: GPRVCSLLLIWGLGLRAGMDRGS*KFTGMG
Trigger: CCCCATGCCGGTGAACTTCAATGAGCCCCTGTCCAT...CCCCGCCCTGAGACCCAGGCCCCAAATCAGCAATAATGAACAAACCCTTGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp CCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAATGGACAGGGGCTCATaGAAGTTCACCGGCATGGGG +
Preference number: 5 (lower is better)
Translates to: PGQPFLLPRWESQESVGRMDRGS*KFTGMG
Trigger: CCCCATGCCGGTGAACTTCAATGAGCCCCTGTCCAT...TCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp CTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAATGGGGTTGAAGGGCTaGGCGATGCGGTGCACTGTG +
Preference number: 5 (lower is better)
Translates to: LERTQVSPSSFQGGSPKKMGLKG*AMRCTV
Trigger: CACAGTGCACCGCATCGCCAAGCCCTTCAACCCCAT...TTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp GTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAAAATCCCCCAGCATGGGGTaGAAGGGCTTGGCGATGCGG +
Preference number: 5 (lower is better)
Translates to: VSPSSFQGGSPKKVWGEKSPSMG*KGLAMR
Trigger: CCGCATCGCCAAGCCCTTCAACCCCATGCTGGGGGA...TTTTTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp GGGATGCAAGGTCTCTGGTGCCCAGGTCACCAGCCCAGGCTGGGCCAAGGGTTTAGCTGGCACCGGTCATaGGTCTTATGGTTCACAATC +
Preference number: 5 (lower is better)
Translates to: GMQGLWCPGHQPRLGQGFSWHRS*VLWFTI
Trigger: GATTGTGAACCATAAGACCAATGACCGGTGCCAGCT...AAACCCTTGGCCCAGCCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCATCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp CCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGCTTGGAGCACTCCATTaGTTCATCCCACGAGCCGGA +
Preference number: 5 (lower is better)
Translates to: PRSALPPSKVGVPRKCGELGALH*FIPRAG
Trigger: TCCGGCTCGTGGGATGAACAAATGGAGTGCTCCAAG...CTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000535268.5
CDS-3UTR CAA 90 bp CCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGTTCTTCCACAGCAGCTaGGCTGACAGGGTCTGGTAC +
Preference number: 5 (lower is better)
Translates to: PRSALPPSKVGVPRKCGEFFHSS*ADRVWY
Trigger: GTACCAGACCCTGTCAGCCAAGCTGCTGTGGAAGAA...CTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000535268.5
CDS-3UTR CAA 90 bp GTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAAAACCCTCCTCGTGCTCGTaGAGGGTCAGGGCCAGCTCT +
Preference number: 5 (lower is better)
Translates to: VSPSSFQGGSPKKVWGEKPSSCS*RVRASS
Trigger: AGAGCTGGCCCTGACCCTCAACGAGCACGAGGAGGG...TTTTTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp GTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAAAACGCTGCTTCTCGGTATaGGCCTCGTCCCAACGGCCC +
Preference number: 5 (lower is better)
Translates to: VSPSSFQGGSPKKVWGEKRCFSV*ASSQRP
Trigger: GGGCCGTTGGGACGAGGCCAATACCGAGAAGCAGCG...TTTTTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp GGCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCAGGCGCCTGTATTTGTaGCAAGGGTGGCGCTCAGAA +
Preference number: 5 (lower is better)
Translates to: GQGLLPSNPHGGYHQYPLRRLYL*QGWRSE
Trigger: TTCTGAGCGCCACCCTTGCAACAAATACAGGCGCCT...GAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp GTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCTGGGGGCTGGAGAGAACCCTTGCCAGGACACTTTaGTGGCAAGAAAGCACACTT +
Preference number: 5 (lower is better)
Translates to: VHNEGARVTRRTWGLERTLARTL*WQESTL
Trigger: AAGTGTGCTTTCTTGCCACAAAAGTGTCCTGGCAAG...GGTTCTCTCCAGCCCCCAGGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp GGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAAACAGCCCCCTTCTGTTTaGGGCTCTGTGGGGCCTTGG +
Preference number: 5 (lower is better)
Translates to: GQPFLLPRWESQESVGRKQPPSV*GSVGPW
Trigger: CCAAGGCCCCACAGAGCCCAAAACAGAAGGGGGCTG...TTTTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp GGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAATTCATTATTGCTGATTaGGGGCCTGGGTCTCAGGGC +
Preference number: 5 (lower is better)
Translates to: GAGENPGQPFLLPRWESQFIIAD*GPGSQG
Trigger: GCCCTGAGACCCAGGCCCCAAATCAGCAATAATGAA...TTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp AGGAGGGATGCAAGGTCTCTGGTGCCCAGGTCACCAGCCCAGGCTGGGCCAAGGGCTAACAAAACAGTGTaGGGGAGAGGTACATTCCAC +
Preference number: 5 (lower is better)
Translates to: RRDARSLVPRSPAQAGPRANKTV*GRGTFH
Trigger: GTGGAATGTACCTCTCCCCAACACTGTTTTGTTAGC...CCTTGGCCCAGCCTGGGCTGGTGACCTGGGCACCAGAGACCTTGCATCCCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000437268.6
ENST00000535268.5
CDS GCA 90 bp GTGCTGAGGTCATCTAACTTCAGGGAAAGATTCTTCAGGGTGTGGTaGAGCTCGCTCTTGTCGGCTGGGGTGGTAGCCTCGTCGTCGTCC +
Preference number: 5 (lower is better)
Translates to: VLRSSNFRERFFRVW*SSLLSAGVVASSSS
Trigger: GGACGACGACGAGGCTACCACCCCAGCCGACAAGAGCGAGCTGCACCACACCCTGAAGAATCTTTCCCTGAAGTTAGATGACCTCAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000424224.5
ENST00000437268.6
ENST00000438716.3
ENST00000445781.5
ENST00000446658.6
ENST00000477355.5
ENST00000496367.1
CDS CCA 90 bp CACGTGCTGAGGTCATCTAACTTCAGGGAAAGATTCTTCAGGGTGTaGTGCAGCTCGCTCTTGTCGGCTGGGGTGGTAGCCTCGTCGTCG +
Preference number: 5 (lower is better)
Translates to: HVLRSSNFRERFFRV*CSSLLSAGVVASSS
Trigger: CGACGACGAGGCTACCACCCCAGCCGACAAGAGCGAGCTGCACCACACCCTGAAGAATCTTTCCCTGAAGTTAGATGACCTCAGCACGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000424224.5
ENST00000437268.6
ENST00000438716.3
ENST00000445781.5
ENST00000446658.6
ENST00000477355.5
ENST00000496367.1
CDS-3UTR CAA 90 bp GCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTTGGCGATGAGGTCATaGCACGTGCTGAGGTCATCT +
Preference number: 5 (lower is better)
Translates to: ARDCCPQIHMGVTISTPSLAMRS*HVLRSS
Trigger: AGATGACCTCAGCACGTGCAATGACCTCATCGCCAA...GGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000437268.6
CDS-3UTR CAA 90 bp GGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAAAAGTGCAGCGCCGTGCTaGGCGATGAGGTCATTGCAC +
Preference number: 5 (lower is better)
Translates to: GQPFLLPRWESQESVGRKSAAPC*AMRSLH
Trigger: GTGCAATGACCTCATCGCCAAGCACGGCGCTGCACT...TTTTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000437268.6
ENST00000438716.3
CDS-3UTR CAA 90 bp CTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGAGTGCAGCGCCGTGCTaGGCGATGAGGTCATTGCAC +
Preference number: 5 (lower is better)
Translates to: LKSTWGLPSVPPPASVDGSAAPC*AMRSLH
Trigger: GTGCAATGACCTCATCGCCAAGCACGGCGCTGCACT...CCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000437268.6
CDS-3UTR CAA 90 bp GGAAGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCAGCCCGCTCGAGGCTGTaGTGCTGCTTCGCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: GRAGNGLGERPFSTKLSAARSRL*CCFASC
Trigger: GCAGCTGGCGAAGCAGCACAACAGCCTCGAGCGGGC...TGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp CAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAATCCAGTCCACGGAACTaGTCCCGGTGCTACCTTCAG +
Preference number: 5 (lower is better)
Translates to: QVSPSSFQGGSPKKVWGESSPRN*SRCYLQ
Trigger: CTGAAGGTAGCACCGGGACAAGTTCCGTGGACTGGA...TTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp CTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAATCCAGTCCACGGAACTaGTCCCGGTGCTACCTTCAG +
Preference number: 5 (lower is better)
Translates to: LERTQVSPSSFQGGSPKKSSPRN*SRCYLQ
Trigger: CTGAAGGTAGCACCGGGACAAGTTCCGTGGACTGGA...TTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp GCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCGCACCATCTAGTACATaGTCTGCTGAGCTCCAGTCC +
Preference number: 5 (lower is better)
Translates to: ARDCCPQIHMGVTISTPSAPSST*SAELQS
Trigger: GGACTGGAGCTCAGCAGACAATGTACTAGATGGTGC...GGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp GGGCCAAGGGTTTGTTCATTATTGCTGATTTGGGGCCTGGGTCTCAGGGCGGGGACTCGCCTCTTGACTTaGGATGAACCCTTGGGCACG +
Preference number: 5 (lower is better)
Translates to: GPRVCSLLLIWGLGLRAGTRLLT*DEPLGT
Trigger: CGTGCCCAAGGGTTCATCCAAAGTCAAGAGGCGAGT...CCCCGCCCTGAGACCCAGGCCCCAAATCAGCAATAATGAACAAACCCTTGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp CCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAACTCGCCTCTTGACTTaGGATGAACCCTTGGGCACG +
Preference number: 5 (lower is better)
Translates to: PGQPFLLPRWESQESVGRTRLLT*DEPLGT
Trigger: CGTGCCCAAGGGTTCATCCAAAGTCAAGAGGCGAGT...TCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp CAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAATGGACAGGGGCTCATaGAAGTTCACCGGCATGGGG +
Preference number: 5 (lower is better)
Translates to: QVSPSSFQGGSPKKVWGEMDRGS*KFTGMG
Trigger: CCCCATGCCGGTGAACTTCAATGAGCCCCTGTCCAT...TTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp CTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAATGGACAGGGGCTCATaGAAGTTCACCGGCATGGGG +
Preference number: 5 (lower is better)
Translates to: LERTQVSPSSFQGGSPKKMDRGS*KFTGMG
Trigger: CCCCATGCCGGTGAACTTCAATGAGCCCCTGTCCAT...TTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp CCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGATGGGGTTGAAGGGCTaGGCGATGCGGTGCACTGTG +
Preference number: 5 (lower is better)
Translates to: PQIHMGVTISTPSCICGWMGLKG*AMRCTV
Trigger: CACAGTGCACCGCATCGCCAAGCCCTTCAACCCCAT...CCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp GGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAAGCTGGCACCGGTCATaGGTCTTATGGTTCACAATC +
Preference number: 5 (lower is better)
Translates to: GAGENPGQPFLLPRWESQSWHRS*VLWFTI
Trigger: GATTGTGAACCATAAGACCAATGACCGGTGCCAGCT...TTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp CCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGTTCATTATTGCTGATTaGGGGCCTGGGTCTCAGGGC +
Preference number: 5 (lower is better)
Translates to: PRSALPPSKVGVPRKCGEFIIAD*GPGSQG
Trigger: GCCCTGAGACCCAGGCCCCAAATCAGCAATAATGAA...CTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp TGGGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAGGGTTTGTTCATTATaGCTGATTTGGGGCCTGGGT +
Preference number: 5 (lower is better)
Translates to: WGLERTQVSPSSFQGGSPRVCSL*LIWGLG
Trigger: ACCCAGGCCCCAAATCAGCAATAATGAACAAACCCT...GGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp TGGGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCGGCTGGGCCAAGGGTTaGTTCATTATTGCTGATTTG +
Preference number: 5 (lower is better)
Translates to: WGLERTQVSPSSFQGGSPGWAKG*FIIADL
Trigger: CAAATCAGCAATAATGAACAAACCCTTGGCCCAGCC...GGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp CTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACAGGTGGGCCCCGGGTCCCGGGGGCTaGCACGGACGCGTGCACAGC +
Preference number: 5 (lower is better)
Translates to: LGERPFSTKLSALMNRWAPGPGG*HGRVHS
Trigger: GCTGTGCACGCGTCCGTGCAAGCCCCCGGGACCCGG...GGCCCACCTGTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437268.6
CDS CCA 90 bp CAGGGAAAGATTCTTCAGGGTGTGGTGCAGCTCGCTCTTGTCGGCTaGGGTGGTAGCCTCGTCGTCGTCCCCAGAGTCATCCTTCTTAAA +
Preference number: 5 (lower is better)
Translates to: QGKILQGVVQLALVG*GGSLVVVPRVILLK
Trigger: TTTAAGAAGGATGACTCTGGGGACGACGACGAGGCTACCACCCCAGCCGACAAGAGCGAGCTGCACCACACCCTGAAGAATCTTTCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437268.6
CDS-3UTR CAA 90 bp GGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAAACTCTCAGATGGGATCTaGAGGCCGTCCAGCTCTGTC +
Preference number: 5 (lower is better)
Translates to: GQPFLLPRWESQESVGRKLSDGI*RPSSSV
Trigger: GACAGAGCTGGACGGCCTCAAGATCCCATCTGAGAG...TTTTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000437268.6
ENST00000438716.3
CDS-3UTR CAA 90 bp AGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAAAGCTCTTGGAGGGGTaGGCCGGCCGGCCAGGGGCA +
Preference number: 5 (lower is better)
Translates to: RAGNGLGERPFSTKLSALKLLEG*AGRPGA
Trigger: TGCCCCTGGCCGGCCGGCCAACCCCTCCAAGAGCTT...TAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp CAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAATCACTGTCCTCTCCTTaGGGAGTCAAGAGGCTTCCC +
Preference number: 5 (lower is better)
Translates to: QVSPSSFQGGSPKKVWGESLSSP*GVKRLP
Trigger: GGGAAGCCTCTTGACTCCCAAAGGAGAGGACAGTGA...TTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp CCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAGCACCATCTAGTACATaGTCTGCTGAGCTCCAGTCC +
Preference number: 5 (lower is better)
Translates to: PGQPFLLPRWESQESVGRAPSST*SAELQS
Trigger: GGACTGGAGCTCAGCAGACAATGTACTAGATGGTGC...TCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp GCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAGCACCATCTAGTACATaGTCTGCTGAGCTCCAGTCC +
Preference number: 5 (lower is better)
Translates to: AGENPGQPFLLPRWESQEAPSST*SAELQS
Trigger: GGACTGGAGCTCAGCAGACAATGTACTAGATGGTGC...TTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp TCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGAGCTCCGCACCATCTAGTACATaGTCTGCTGAGCTCCAGTCC +
Preference number: 5 (lower is better)
Translates to: STWGLPSVPPPASVDGSSAPSST*SAELQS
Trigger: GGACTGGAGCTCAGCAGACAATGTACTAGATGGTGC...GGAGCTCCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp TGTGCAGGCGCCTGTATTTGTTGCAAGGGTGGCGCTCAGAAGATGTTGGGGCACACTCGCCTCTTGACTTaGGATGAACCCTTGGGCACG +
Preference number: 5 (lower is better)
Translates to: CAGACICCKGGAQKMLGHTRLLT*DEPLGT
Trigger: CGTGCCCAAGGGTTCATCCAAAGTCAAGAGGCGAGT...GTGCCCCAACATCTTCTGAGCGCCACCCTTGCAACAAATACAGGCGCCTGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452656.5
CDS-3UTR CAA 90 bp CAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAACTCGCCTCTTGACTTaGGATGAACCCTTGGGCACG +
Preference number: 5 (lower is better)
Translates to: QVSPSSFQGGSPKKVWGETRLLT*DEPLGT
Trigger: CGTGCCCAAGGGTTCATCCAAAGTCAAGAGGCGAGT...TTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp GCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAATGCGGACTCGCCTCTaGACTTTGGATGAACCCTTG +
Preference number: 5 (lower is better)
Translates to: AGENPGQPFLLPRWESQEMRTRL*TLDEPL
Trigger: CAAGGGTTCATCCAAAGTCAAGAGGCGAGTCCGCAT...TTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp CATATGCCAGTCTTGCTTCTCCTTGGCCTCCCAGTAGCCGCCCTTGTACACACAATGGACAGGGGCTCATaGAAGTTCACCGGCATGGGG +
Preference number: 5 (lower is better)
Translates to: HMPVLLLLGLPVAALVHTMDRGS*KFTGMG
Trigger: CCCCATGCCGGTGAACTTCAATGAGCCCCTGTCCAT...TGTGTGTACAAGGGCGGCTACTGGGAGGCCAAGGAGAAGCAAGACTGGCATATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452656.5
CDS-3UTR CAA 90 bp GTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAAAAATGGGGTTGAAGGGCTaGGCGATGCGGTGCACTGTG +
Preference number: 5 (lower is better)
Translates to: VSPSSFQGGSPKKVWGEKMGLKG*AMRCTV
Trigger: CACAGTGCACCGCATCGCCAAGCCCTTCAACCCCAT...TTTTTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGAC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp GGAAGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATCCCCCAGCATGGGGTaGAAGGGCTTGGCGATGCGG +
Preference number: 5 (lower is better)
Translates to: GRAGNGLGERPFSTKLSASPSMG*KGLAMR
Trigger: CCGCATCGCCAAGCCCTTCAACCCCATGCTGGGGGA...TGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp GCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTATTTTCCCCGGAACTaGCTGGAGATGGTGATCTCC +
Preference number: 5 (lower is better)
Translates to: ARDCCPQIHMGVTISTPSYFPRN*LEMVIS
Trigger: GGAGATCACCATCTCCAGCAAGTTCCGGGGAAAATA...GGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp GCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCAGCTGGCACCGGTCATaGGTCTTATGGTTCACAATC +
Preference number: 5 (lower is better)
Translates to: ARDCCPQIHMGVTISTPSSWHRS*VLWFTI
Trigger: GATTGTGAACCATAAGACCAATGACCGGTGCCAGCT...GGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp GGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAACTGCTATGCATGACCTaGGAGCACTCCATTTGTTCA +
Preference number: 5 (lower is better)
Translates to: GAGENPGQPFLLPRWESQLLCMT*EHSICS
Trigger: TGAACAAATGGAGTGCTCCAAGGTCATGCATAGCAG...TTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000535268.5
CDS-3UTR CAA 90 bp TGGAGCACTCCATTTGTTCATCCCACGAGCCGGACAGCACGTAATGGGCCTTGCTTCTTCCACAGCAGCTaGGCTGACAGGGTCTGGTAC +
Preference number: 5 (lower is better)
Translates to: WSTPFVHPTSRTARNGPCFFHSS*ADRVWY
Trigger: GTACCAGACCCTGTCAGCCAAGCTGCTGTGGAAGAA...GCAAGGCCCATTACGTGCTGTCCGGCTCGTGGGATGAACAAATGGAGTGCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433183.2
CDS-3UTR CAA 90 bp AGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAGCAGGCGGCTGTCGGTaGGCGCTACGCCCTCCTCGT +
Preference number: 5 (lower is better)
Translates to: RAGNGLGERPFSTKLSALAGGCR*ALRPPR
Trigger: ACGAGGAGGGCGTAGCGCCAACCGACAGCCGCCTGC...TAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp CAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAGCACATATGCCAGTCTaGCTTCTCCTTGGCCTCCCA +
Preference number: 5 (lower is better)
Translates to: QVSPSSFQGGSPKKVWGEAHMPV*LLLGLP
Trigger: TGGGAGGCCAAGGAGAAGCAAGACTGGCATATGTGC...TTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp CTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAAGGCGCCTGTATTTGTaGCAAGGGTGGCGCTCAGAA +
Preference number: 5 (lower is better)
Translates to: LERTQVSPSSFQGGSPKKRRLYL*QGWRSE
Trigger: TTCTGAGCGCCACCCTTGCAACAAATACAGGCGCCT...TTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp TGTGCAGGCGCCTGTATTTGTTGCAAGGGTGGCGCTCAGAAGATGTTGGGGCACAGGCGCCTGTATTTGTaGCAAGGGTGGCGCTCAGAA +
Preference number: 5 (lower is better)
Translates to: CAGACICCKGGAQKMLGHRRLYL*QGWRSE
Trigger: TTCTGAGCGCCACCCTTGCAACAAATACAGGCGCCT...GTGCCCCAACATCTTCTGAGCGCCACCCTTGCAACAAATACAGGCGCCTGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452656.5
CDS-3UTR CAA 90 bp GGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAAATGCAGGCGCCTGTATTaGTTGCAAGGGTGGCGCTCA +
Preference number: 5 (lower is better)
Translates to: GQPFLLPRWESQESVGRKCRRLY*LQGWRS
Trigger: TGAGCGCCACCCTTGCAACAAATACAGGCGCCTGCA...TTTTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp GGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAACTTGCCAGGACACTTTaGTGGCAAGAAAGCACACTT +
Preference number: 5 (lower is better)
Translates to: GAGENPGQPFLLPRWESQLARTL*WQESTL
Trigger: AAGTGTGCTTTCTTGCCACAAAAGTGTCCTGGCAAG...TTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp GTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCTGGGGGCTGGAGAGAACCCGAGGACTTGATATGTaGAGCTACAAAATTCTCCCA +
Preference number: 5 (lower is better)
Translates to: VHNEGARVTRRTWGLERTRGLDM*SYKILP
Trigger: TGGGAGAATTTTGTAGCTCAACATATCAAGTCCTCG...GGTTCTCTCCAGCCCCCAGGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS GCA 90 bp TGCTCAATGGTTTCCTCCAAGTGCACGCGCTGCTCCTGCTCATACTaGAGTGCCCGCTGCCATTTCCGACTGTGTATCTCTGCTAGTTCC +
Preference number: 5 (lower is better)
Translates to: CSMVSSKCTRCSCSY*SARCHFRLCISASS
Trigger: GGAACTAGCAGAGATACACAGTCGGAAATGGCAGCGGGCACTGCAGTATGAGCAGGAGCAGCGCGTGCACTTGGAGGAAACCATTGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000424224.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000446658.6
ENST00000452656.5
ENST00000453621.5
ENST00000454145.5
ENST00000535268.5
CDS-3UTR CAA 90 bp GGAAGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATGCGCGGTGGACAGGTaGATGGTTCCACGGCACGTG +
Preference number: 5 (lower is better)
Translates to: GRAGNGLGERPFSTKLSACAVDR*MVPRHV
Trigger: CACGTGCCGTGGAACCATCAACCTGTCCACCGCGCA...TGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000438716.3
CDS-3UTR CAA 90 bp CTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAATTGGCGATGAGGTCATaGCACGTGCTGAGGTCATCT +
Preference number: 5 (lower is better)
Translates to: LERTQVSPSSFQGGSPKKLAMRS*HVLRSS
Trigger: AGATGACCTCAGCACGTGCAATGACCTCATCGCCAA...TTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000437268.6
ENST00000438716.3
CDS-3UTR CAA 90 bp GCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAGCGTTGATCATAGCATaGGATGTGATGCGGAAGAGG +
Preference number: 5 (lower is better)
Translates to: AGENPGQPFLLPRWESQEALIIA*DVMRKR
Trigger: CCTCTTCCGCATCACATCCAATGCTATGATCAACGC...TTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000437268.6
ENST00000438716.3
CDS-3UTR CAA 90 bp GCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAAGTCCCTGCAGGCGTaGATCATAGCATTGGATGTG +
Preference number: 5 (lower is better)
Translates to: AGENPGQPFLLPRWESQEKSLQA*IIALDV
Trigger: CACATCCAATGCTATGATCAACGCCTGCAGGGACTT...TTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000437268.6
ENST00000438716.3
CDS-3UTR CAA 90 bp CTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACAGGTGGGCCAAGCTCTTGGAGGGGTaGGCCGGCCGGCCAGGGGCA +
Preference number: 5 (lower is better)
Translates to: LGERPFSTKLSALMNRWAKLLEG*AGRPGA
Trigger: TGCCCCTGGCCGGCCGGCCAACCCCTCCAAGAGCTT...GGCCCACCTGTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp CTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGTCACTGTCCTCTCCTTaGGGAGTCAAGAGGCTTCCC +
Preference number: 5 (lower is better)
Translates to: LKSTWGLPSVPPPASVDGSLSSP*GVKRLP
Trigger: GGGAAGCCTCTTGACTCCCAAAGGAGAGGACAGTGA...CCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000332585.11
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp GGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAAATCACTGTCCTCTCCTTaGGGAGTCAAGAGGCTTCCC +
Preference number: 5 (lower is better)
Translates to: GQPFLLPRWESQESVGRKSLSSP*GVKRLP
Trigger: GGGAAGCCTCTTGACTCCCAAAGGAGAGGACAGTGA...TTTTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp GTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAAAATCCAGTCCACGGAACTaGTCCCGGTGCTACCTTCAG +
Preference number: 5 (lower is better)
Translates to: VSPSSFQGGSPKKVWGEKSSPRN*SRCYLQ
Trigger: CTGAAGGTAGCACCGGGACAAGTTCCGTGGACTGGA...TTTTTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp CAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAGCACCATCTAGTACATaGTCTGCTGAGCTCCAGTCC +
Preference number: 5 (lower is better)
Translates to: QVSPSSFQGGSPKKVWGEAPSST*SAELQS
Trigger: GGACTGGAGCTCAGCAGACAATGTACTAGATGGTGC...TTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp GGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAAAACTCGCCTCTTGACTTaGGATGAACCCTTGGGCACG +
Preference number: 5 (lower is better)
Translates to: GQPFLLPRWESQESVGRKTRLLT*DEPLGT
Trigger: CGTGCCCAAGGGTTCATCCAAAGTCAAGAGGCGAGT...TTTTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp CCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGATATTTTCCCCGGAACTaGCTGGAGATGGTGATCTCC +
Preference number: 5 (lower is better)
Translates to: PGQPFLLPRWESQESVGRYFPRN*LEMVIS
Trigger: GGAGATCACCATCTCCAGCAAGTTCCGGGGAAAATA...TCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp CTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGCTTGGAGCACTCCATTaGTTCATCCCACGAGCCGGA +
Preference number: 5 (lower is better)
Translates to: LKSTWGLPSVPPPASVDGLGALH*FIPRAG
Trigger: TCCGGCTCGTGGGATGAACAAATGGAGTGCTCCAAG...CCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000535268.5
CDS-3UTR CAA 90 bp GGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAAATTCTTCCACAGCAGCTaGGCTGACAGGGTCTGGTAC +
Preference number: 5 (lower is better)
Translates to: GQPFLLPRWESQESVGRKFFHSS*ADRVWY
Trigger: GTACCAGACCCTGTCAGCCAAGCTGCTGTGGAAGAA...TTTTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000535268.5
CDS-3UTR CAA 90 bp CTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACAGGTGGGCCGCAGGCGGCTGTCGGTaGGCGCTACGCCCTCCTCGT +
Preference number: 5 (lower is better)
Translates to: LGERPFSTKLSALMNRWAAGGCR*ALRPPR
Trigger: ACGAGGAGGGCGTAGCGCCAACCGACAGCCGCCTGC...GGCCCACCTGTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp GTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAAAATGCAGGCGCCTGTATTaGTTGCAAGGGTGGCGCTCA +
Preference number: 5 (lower is better)
Translates to: VSPSSFQGGSPKKVWGEKCRRLY*LQGWRS
Trigger: TGAGCGCCACCCTTGCAACAAATACAGGCGCCTGCA...TTTTTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp AGTTCCTCCCTGGGTTGGGGGCTGGTGATTTGCGCAGCCCATGGCCCGGGCCAGCCATTCAGTACTAAATaGAGTGCATTAATGAACAGG +
Preference number: 5 (lower is better)
Translates to: SSSLGWGLVICAAHGPGQPFSTK*SALMNR
Trigger: CCTGTTCATTAATGCACTCAATTTAGTACTGAATGG...CTGGCCCGGGCCATGGGCTGCGCAAATCACCAGCCCCCAACCCAGGGAGGAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp GCTTCTCCTTGGCCTCCCAGTAGCCGCCCTTGTACACACAGGCCATCTCCCCGGCGAGGACTTGATATGTaGAGCTACAAAATTCTCCCA +
Preference number: 5 (lower is better)
Translates to: ASPWPPSSRPCTHRPSPRRGLDM*SYKILP
Trigger: TGGGAGAATTTTGTAGCTCAACATATCAAGTCCTCG...CCGGGGAGATGGCCTGTGTGTACAAGGGCGGCTACTGGGAGGCCAAGGAGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452656.5
CDS-3UTR CAA 90 bp GGCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCGGCTGGGCCAAGGGTTaGTTCATTATTGCTGATTTG +
Preference number: 5 (lower is better)
Translates to: GQGLLPSNPHGGYHQYPLGWAKG*FIIADL
Trigger: CAAATCAGCAATAATGAACAAACCCTTGGCCCAGCC...GAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp GCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCGGCTGGGCCAAGGGTTaGTTCATTATTGCTGATTTG +
Preference number: 5 (lower is better)
Translates to: ARDCCPQIHMGVTISTPSGWAKG*FIIADL
Trigger: CAAATCAGCAATAATGAACAAACCCTTGGCCCAGCC...GGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp CCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGGGCTGGGCCAAGGGTTaGTTCATTATTGCTGATTTG +
Preference number: 5 (lower is better)
Translates to: PRSALPPSKVGVPRKCGEGWAKG*FIIADL
Trigger: CAAATCAGCAATAATGAACAAACCCTTGGCCCAGCC...CTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp CCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGGCTAACAAAACAGTGTaGGGGAGAGGTACATTCCAC +
Preference number: 5 (lower is better)
Translates to: PRSALPPSKVGVPRKCGEANKTV*GRGTFH
Trigger: GTGGAATGTACCTCTCCCCAACACTGTTTTGTTAGC...CTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000437268.6
ENST00000535268.5
CDS-3UTR CAA 90 bp GCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCGCTAACAAAACAGTGTaGGGGAGAGGTACATTCCAC +
Preference number: 5 (lower is better)
Translates to: ARDCCPQIHMGVTISTPSANKTV*GRGTFH
Trigger: GTGGAATGTACCTCTCCCCAACACTGTTTTGTTAGC...GGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000437268.6
ENST00000535268.5
CDS-3UTR CAA 90 bp GTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAAAAAGCGATTCTCCTGCCTaGGCCTCCCTAGTAGCTGGA +
Preference number: 5 (lower is better)
Translates to: VSPSSFQGGSPKKVWGEKSDSPA*ASLVAG
Trigger: TCCAGCTACTAGGGAGGCCAAGGCAGGAGAATCGCT...TTTTTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGAC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000438716.3
CDS TCA 90 bp AGATACCACAAGAGTCCTCCGTGTCAATGTGCGCGGTGGACAGGTTaGTGGTTCCACGGCACGTGTGGGCCATTTCACCCTGATTTCTGT +
Preference number: 5 (lower is better)
Translates to: RYHKSPPCQCARWTG*WFHGTCGPFHPDFC
Trigger: ACAGAAATCAGGGTGAAATGGCCCACACGTGCCGTGGAACCATCAACCTGTCCACCGCGCACATTGACACGGAGGACTCTTGTGGTATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000438716.3
ENST00000446658.6
CDS CCA 90 bp TGTGAACAGTTGAGGTGCTCTTCCTCCACACGTAGTGATTCCCACTaGCCTGGAATTCTAAGTGGATGGCACCTGCTCACAGAGGGAGCG +
Preference number: 5 (lower is better)
Translates to: CEQLRCSSSTRSDSH*PGILSGWHLLTEGA
Trigger: CGCTCCCTCTGTGAGCAGGTGCCATCCACTTAGAATTCCAGGCCAGTGGGAATCACTACGTGTGGAGGAAGAGCACCTCAACTGTTCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496575.1
CDS-3UTR CAA 90 bp CCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGTTGGCGATGAGGTCATaGCACGTGCTGAGGTCATCT +
Preference number: 5 (lower is better)
Translates to: PQIHMGVTISTPSCICGWLAMRS*HVLRSS
Trigger: AGATGACCTCAGCACGTGCAATGACCTCATCGCCAA...CCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000437268.6
CDS-3UTR CAA 90 bp AGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTACCCTCAATGAAGCTCTaGGAGGGGTTGGCCGGCCGG +
Preference number: 5 (lower is better)
Translates to: RAGNGLGERPFSTKLSALPSMKL*EGLAGR
Trigger: CCGGCCGGCCAACCCCTCCAAGAGCTTCATTGAGGG...TAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp CTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGATGCGGACTCGCCTCTaGACTTTGGATGAACCCTTG +
Preference number: 5 (lower is better)
Translates to: LKSTWGLPSVPPPASVDGMRTRL*TLDEPL
Trigger: CAAGGGTTCATCCAAAGTCAAGAGGCGAGTCCGCAT...CCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp GGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAAAATGCGGACTCGCCTCTaGACTTTGGATGAACCCTTG +
Preference number: 5 (lower is better)
Translates to: GQPFLLPRWESQESVGRKMRTRL*TLDEPL
Trigger: CAAGGGTTCATCCAAAGTCAAGAGGCGAGTCCGCAT...TTTTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp CAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAATATTTTCCCCGGAACTaGCTGGAGATGGTGATCTCC +
Preference number: 5 (lower is better)
Translates to: QVSPSSFQGGSPKKVWGEYFPRN*LEMVIS
Trigger: GGAGATCACCATCTCCAGCAAGTTCCGGGGAAAATA...TTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp CTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAAGCTGGCACCGGTCATaGGTCTTATGGTTCACAATC +
Preference number: 5 (lower is better)
Translates to: LERTQVSPSSFQGGSPKKSWHRS*VLWFTI
Trigger: GATTGTGAACCATAAGACCAATGACCGGTGCCAGCT...TTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp GTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAAAACTTGGAGCACTCCATTaGTTCATCCCACGAGCCGGA +
Preference number: 5 (lower is better)
Translates to: VSPSSFQGGSPKKVWGEKLGALH*FIPRAG
Trigger: TCCGGCTCGTGGGATGAACAAATGGAGTGCTCCAAG...TTTTTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000535268.5
CDS-3UTR CAA 90 bp CCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGACTGCTATGCATGACCTaGGAGCACTCCATTTGTTCA +
Preference number: 5 (lower is better)
Translates to: PGQPFLLPRWESQESVGRLLCMT*EHSICS
Trigger: TGAACAAATGGAGTGCTCCAAGGTCATGCATAGCAG...TCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000535268.5
CDS-3UTR CAA 90 bp GCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAACTGCTATGCATGACCTaGGAGCACTCCATTTGTTCA +
Preference number: 5 (lower is better)
Translates to: AGENPGQPFLLPRWESQELLCMT*EHSICS
Trigger: TGAACAAATGGAGTGCTCCAAGGTCATGCATAGCAG...TTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000535268.5
CDS-3UTR CAA 90 bp TGTGGCAAGAAAGCACACTTGGAAAGCTGTCTGCTAAGTGCGGTACTAAAAATAGCAGGCGGCTGTCGGTaGGCGCTACGCCCTCCTCGT +
Preference number: 5 (lower is better)
Translates to: CGKKAHLESCLLSAVLKIAGGCR*ALRPPR
Trigger: ACGAGGAGGGCGTAGCGCCAACCGACAGCCGCCTGC...TATTTTTAGTACCGCACTTAGCAGACAGCTTTCCAAGTGTGCTTTCTTGCCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp GTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAAAAAGGCGCCTGTATTTGTaGCAAGGGTGGCGCTCAGAA +
Preference number: 5 (lower is better)
Translates to: VSPSSFQGGSPKKVWGEKRRLYL*QGWRSE
Trigger: TTCTGAGCGCCACCCTTGCAACAAATACAGGCGCCT...TTTTTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGAC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp GTCCATAATGAAGGGGCACGGGTGACCCGGCGCACCTGGGGGCTGGAGAGAACCCCATTCAGTACTAAATaGAGTGCATTAATGAACAGG +
Preference number: 5 (lower is better)
Translates to: VHNEGARVTRRTWGLERTPFSTK*SALMNR
Trigger: CCTGTTCATTAATGCACTCAATTTAGTACTGAATGG...GGTTCTCTCCAGCCCCCAGGTGCGCCGGGTCACCCGTGCCCCTTCATTATGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp GCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAACTTGCCAGGACACTTTaGTGGCAAGAAAGCACACTT +
Preference number: 5 (lower is better)
Translates to: AGENPGQPFLLPRWESQELARTL*WQESTL
Trigger: AAGTGTGCTTTCTTGCCACAAAAGTGTCCTGGCAAG...TTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp GGGCCAAGGGTTTGTTCATTATTGCTGATTTGGGGCCTGGGTCTCAGGGCGGGGCTTGCCAGGACACTTTaGTGGCAAGAAAGCACACTT +
Preference number: 5 (lower is better)
Translates to: GPRVCSLLLIWGLGLRAGLARTL*WQESTL
Trigger: AAGTGTGCTTTCTTGCCACAAAAGTGTCCTGGCAAG...CCCCGCCCTGAGACCCAGGCCCCAAATCAGCAATAATGAACAAACCCTTGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp CCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAGGGTTTGTTCATTATaGCTGATTTGGGGCCTGGGT +
Preference number: 5 (lower is better)
Translates to: PGQPFLLPRWESQESVGRRVCSL*LIWGLG
Trigger: ACCCAGGCCCCAAATCAGCAATAATGAACAAACCCT...TCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp CCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGCGTTGATCATAGCATaGGATGTGATGCGGAAGAGG +
Preference number: 5 (lower is better)
Translates to: PQIHMGVTISTPSCICGWALIIA*DVMRKR
Trigger: CCTCTTCCGCATCACATCCAATGCTATGATCAACGC...CCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000437268.6
CDS-3UTR CAA 90 bp GGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACGCCCGCTCGAGGCTGTaGTGCTGCTTCGCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: GNGLGERPFSTKLSALMNARSRL*CCFASC
Trigger: GCAGCTGGCGAAGCAGCACAACAGCCTCGAGCGGGC...GTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp GGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAAATATTTTCCCCGGAACTaGCTGGAGATGGTGATCTCC +
Preference number: 5 (lower is better)
Translates to: GQPFLLPRWESQESVGRKYFPRN*LEMVIS
Trigger: GGAGATCACCATCTCCAGCAAGTTCCGGGGAAAATA...TTTTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp CCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGTATTTTCCCCGGAACTaGCTGGAGATGGTGATCTCC +
Preference number: 5 (lower is better)
Translates to: PQIHMGVTISTPSCICGWYFPRN*LEMVIS
Trigger: GGAGATCACCATCTCCAGCAAGTTCCGGGGAAAATA...CCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp CCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGAGCTGGCACCGGTCATaGGTCTTATGGTTCACAATC +
Preference number: 5 (lower is better)
Translates to: PQIHMGVTISTPSCICGWSWHRS*VLWFTI
Trigger: GATTGTGAACCATAAGACCAATGACCGGTGCCAGCT...CCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp CTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAACTGCTATGCATGACCTaGGAGCACTCCATTTGTTCA +
Preference number: 5 (lower is better)
Translates to: LERTQVSPSSFQGGSPKKLLCMT*EHSICS
Trigger: TGAACAAATGGAGTGCTCCAAGGTCATGCATAGCAG...TTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000535268.5
CDS-3UTR CAA 90 bp TGGAGCACTCCATTTGTTCATCCCACGAGCCGGACAGCACGTAATGGGCCTTGCCTGCTATGCATGACCTaGGAGCACTCCATTTGTTCA +
Preference number: 5 (lower is better)
Translates to: WSTPFVHPTSRTARNGPCLLCMT*EHSICS
Trigger: TGAACAAATGGAGTGCTCCAAGGTCATGCATAGCAG...GCAAGGCCCATTACGTGCTGTCCGGCTCGTGGGATGAACAAATGGAGTGCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433183.2
CDS-3UTR CAA 90 bp CTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACAGGTGGGCCCCCTCCTCGTGCTCGTaGAGGGTCAGGGCCAGCTCT +
Preference number: 5 (lower is better)
Translates to: LGERPFSTKLSALMNRWAPSSCS*RVRASS
Trigger: AGAGCTGGCCCTGACCCTCAACGAGCACGAGGAGGG...GGCCCACCTGTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp TGGGGGCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCCCATTCAGTACTAAATaGAGTGCATTAATGAACAGG +
Preference number: 5 (lower is better)
Translates to: WGLERTQVSPSSFQGGSPPFSTK*SALMNR
Trigger: CCTGTTCATTAATGCACTCAATTTAGTACTGAATGG...GGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGCCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp CTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAACTTGCCAGGACACTTTaGTGGCAAGAAAGCACACTT +
Preference number: 5 (lower is better)
Translates to: LERTQVSPSSFQGGSPKKLARTL*WQESTL
Trigger: AAGTGTGCTTTCTTGCCACAAAAGTGTCCTGGCAAG...TTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp CCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGCGAGGACTTGATATGTaGAGCTACAAAATTCTCCCA +
Preference number: 5 (lower is better)
Translates to: PRSALPPSKVGVPRKCGERGLDM*SYKILP
Trigger: TGGGAGAATTTTGTAGCTCAACATATCAAGTCCTCG...CTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp GCCAGGGACTGCTGCCCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCCGAGGACTTGATATGTaGAGCTACAAAATTCTCCCA +
Preference number: 5 (lower is better)
Translates to: ARDCCPQIHMGVTISTPSRGLDM*SYKILP
Trigger: TGGGAGAATTTTGTAGCTCAACATATCAAGTCCTCG...GGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGGGCAGCAGTCCCTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp CTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGGCTGGGCCAAGGGTTaGTTCATTATTGCTGATTTG +
Preference number: 5 (lower is better)
Translates to: LERTQVSPSSFQGGSPKKGWAKG*FIIADL
Trigger: CAAATCAGCAATAATGAACAAACCCTTGGCCCAGCC...TTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS TCA 90 bp CAATCTCGATGTCCCCTGACTGGTCGATCCAGAGCTTGCCCACGATaGTGTTGTGAACAGTTGAGGTGCTCTTCCTCCACACGTAGTGAT +
Preference number: 5 (lower is better)
Translates to: QSRCPLTGRSRACPR*CCEQLRCSSSTRSD
Trigger: ATCACTACGTGTGGAGGAAGAGCACCTCAACTGTTCACAACATCATCGTGGGCAAGCTCTGGATCGACCAGTCAGGGGACATCGAGATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000433183.2
ENST00000437268.6
ENST00000438716.3
ENST00000446658.6
ENST00000452656.5
ENST00000496575.1
ENST00000535268.5
CDS-3UTR CAA 90 bp TGTGGCAAGAAAGCACACTTGGAAAGCTGTCTGCTAAGTGCGGTACTAAAAATAATCACGCGGACAGCCTaGGCCTTGGCCAGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: CGKKAHLESCLLSAVLKIITRTA*ALASSR
Trigger: CCTGGAGCTGGCCAAGGCCAAGGCTGTCCGCGTGAT...TATTTTTAGTACCGCACTTAGCAGACAGCTTTCCAAGTGTGCTTTCTTGCCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
CDS-3UTR CAA 90 bp GGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACATCACGCGGACAGCCTaGGCCTTGGCCAGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: GNGLGERPFSTKLSALMNITRTA*ALASSR
Trigger: CCTGGAGCTGGCCAAGGCCAAGGCTGTCCGCGTGAT...GTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000438716.3
CDS-3UTR CAA 90 bp GGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACTGGTGCAGCTCGCTCTaGTCGGCTGGGGTGGTAGCC +
Preference number: 5 (lower is better)
Translates to: GNGLGERPFSTKLSALMNWCSSL*SAGVVA
Trigger: GGCTACCACCCCAGCCGACAAGAGCGAGCTGCACCA...GTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000437268.6
ENST00000438716.3
CDS-3UTR CAA 90 bp GGAAGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATCACTGTCCTCTCCTTaGGGAGTCAAGAGGCTTCCC +
Preference number: 5 (lower is better)
Translates to: GRAGNGLGERPFSTKLSASLSSP*GVKRLP
Trigger: GGGAAGCCTCTTGACTCCCAAAGGAGAGGACAGTGA...TGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp GTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAAAAAGCTGGCACCGGTCATaGGTCTTATGGTTCACAATC +
Preference number: 5 (lower is better)
Translates to: VSPSSFQGGSPKKVWGEKSWHRS*VLWFTI
Trigger: GATTGTGAACCATAAGACCAATGACCGGTGCCAGCT...TTTTTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGAC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp GGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACCCCTCCTCGTGCTCGTaGAGGGTCAGGGCCAGCTCT +
Preference number: 5 (lower is better)
Translates to: GNGLGERPFSTKLSALMNPSSCS*RVRASS
Trigger: AGAGCTGGCCCTGACCCTCAACGAGCACGAGGAGGG...GTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp TGTGGCAAGAAAGCACACTTGGAAAGCTGTCTGCTAAGTGCGGTACTAAAAATACGCTGCTTCTCGGTATaGGCCTCGTCCCAACGGCCC +
Preference number: 5 (lower is better)
Translates to: CGKKAHLESCLLSAVLKIRCFSV*ASSQRP
Trigger: GGGCCGTTGGGACGAGGCCAATACCGAGAAGCAGCG...TATTTTTAGTACCGCACTTAGCAGACAGCTTTCCAAGTGTGCTTTCTTGCCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp TACCATCGAGGACTTGATATGTTGAGCTACAAAATTCTCCCAACTCAAAGCGGTCGCTGCTTCTCGGTATaGGCCTCGTCCCAACGGCCC +
Preference number: 5 (lower is better)
Translates to: YHRGLDMLSYKILPTQSGRCFSV*ASSQRP
Trigger: GGGCCGTTGGGACGAGGCCAATACCGAGAAGCAGCG...ACCGCTTTGAGTTGGGAGAATTTTGTAGCTCAACATATCAAGTCCTCGATGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp GGAAGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCAAGGCGCCTGTATTTGTaGCAAGGGTGGCGCTCAGAA +
Preference number: 5 (lower is better)
Translates to: GRAGNGLGERPFSTKLSARRLYL*QGWRSE
Trigger: TTCTGAGCGCCACCCTTGCAACAAATACAGGCGCCT...TGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp CCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGCTTGCCAGGACACTTTaGTGGCAAGAAAGCACACTT +
Preference number: 5 (lower is better)
Translates to: PQIHMGVTISTPSCICGWLARTL*WQESTL
Trigger: AAGTGTGCTTTCTTGCCACAAAAGTGTCCTGGCAAG...CCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp GCTGGAGAGAACCCAGGTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAACGAGGACTTGATATGTaGAGCTACAAAATTCTCCCA +
Preference number: 5 (lower is better)
Translates to: AGENPGQPFLLPRWESQERGLDM*SYKILP
Trigger: TGGGAGAATTTTGTAGCTCAACATATCAAGTCCTCG...TTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGACCTGGGTTCTCTCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp CCTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGGCTGGGCCAAGGGTTaGTTCATTATTGCTGATTTG +
Preference number: 5 (lower is better)
Translates to: PQIHMGVTISTPSCICGWGWAKG*FIIADL
Trigger: CAAATCAGCAATAATGAACAAACCCTTGGCCCAGCC...CCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp CTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGGCTAACAAAACAGTGTaGGGGAGAGGTACATTCCAC +
Preference number: 5 (lower is better)
Translates to: LKSTWGLPSVPPPASVDGANKTV*GRGTFH
Trigger: GTGGAATGTACCTCTCCCCAACACTGTTTTGTTAGC...CCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 4 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000437268.6
ENST00000535268.5
CDS-3UTR CAA 90 bp GGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACTGCGCGGTGGACAGGTaGATGGTTCCACGGCACGTG +
Preference number: 5 (lower is better)
Translates to: GNGLGERPFSTKLSALMNCAVDR*MVPRHV
Trigger: CACGTGCCGTGGAACCATCAACCTGTCCACCGCGCA...GTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000438716.3
CDS-3UTR CAA 90 bp CTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACAGGTGGGCCAGTGCAGCGCCGTGCTaGGCGATGAGGTCATTGCAC +
Preference number: 5 (lower is better)
Translates to: LGERPFSTKLSALMNRWASAAPC*AMRSLH
Trigger: GTGCAATGACCTCATCGCCAAGCACGGCGCTGCACT...GGCCCACCTGTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000437268.6
ENST00000438716.3
CDS-3UTR CAA 90 bp AGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTATCCAGTCCACGGAACTaGTCCCGGTGCTACCTTCAG +
Preference number: 5 (lower is better)
Translates to: RAGNGLGERPFSTKLSALSSPRN*SRCYLQ
Trigger: CTGAAGGTAGCACCGGGACAAGTTCCGTGGACTGGA...TAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp AGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAACTTTGGATGAACCCTaGGGCACGAGCGAGGCACCA +
Preference number: 5 (lower is better)
Translates to: RAGNGLGERPFSTKLSALTLDEP*GTSEAP
Trigger: TGGTGCCTCGCTCGTGCCCAAGGGTTCATCCAAAGT...TAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp GTTTCACATTTATTTACTGTTCGGTGTCTGCCTTCACACTGGGATGTCGGCTGCCTTGGAGCACTCCATTaGTTCATCCCACGAGCCGGA +
Preference number: 5 (lower is better)
Translates to: VSHLFTVRCLPSHWDVGCLGALH*FIPRAG
Trigger: TCCGGCTCGTGGGATGAACAAATGGAGTGCTCCAAG...GCAGCCGACATCCCAGTGTGAAGGCAGACACCGAACAGTAAATAAATGTGAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433183.2
CDS-3UTR CAA 90 bp TGTGGCAAGAAAGCACACTTGGAAAGCTGTCTGCTAAGTGCGGTACTAAAAATACAGCCCCCTTCTGTTTaGGGCTCTGTGGGGCCTTGG +
Preference number: 5 (lower is better)
Translates to: CGKKAHLESCLLSAVLKIQPPSV*GSVGPW
Trigger: CCAAGGCCCCACAGAGCCCAAAACAGAAGGGGGCTG...TATTTTTAGTACCGCACTTAGCAGACAGCTTTCCAAGTGTGCTTTCTTGCCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp GTCAGCCCTTCCTCCTTCCAAGGTGGGAGTCCCAAGAAAGTGTGGGGAGAAAAAGGCTGGGCCAAGGGTTaGTTCATTATTGCTGATTTG +
Preference number: 5 (lower is better)
Translates to: VSPSSFQGGSPKKVWGEKGWAKG*FIIADL
Trigger: CAAATCAGCAATAATGAACAAACCCTTGGCCCAGCC...TTTTTCTCCCCACACTTTCTTGGGACTCCCACCTTGGAAGGAGGAAGGGCTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp AGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAAGTGGGATTCTGAACTaGGACCTCCCGGGATCCCTG +
Preference number: 5 (lower is better)
Translates to: RAGNGLGERPFSTKLSALSGILN*DLPGSL
Trigger: CAGGGATCCCGGGAGGTCCAAGTTCAGAATCCCACT...TAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407373.5
CDS-3UTR CAA 90 bp CTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACAGGTGGGCCCTCTCAGATGGGATCTaGAGGCCGTCCAGCTCTGTC +
Preference number: 5 (lower is better)
Translates to: LGERPFSTKLSALMNRWALSDGI*RPSSSV
Trigger: GACAGAGCTGGACGGCCTCAAGATCCCATCTGAGAG...GGCCCACCTGTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000437268.6
ENST00000438716.3
CDS-3UTR CAA 90 bp CTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACAGGTGGGCCTCCAGTCCACGGAACTaGTCCCGGTGCTACCTTCAG +
Preference number: 5 (lower is better)
Translates to: LGERPFSTKLSALMNRWASSPRN*SRCYLQ
Trigger: CTGAAGGTAGCACCGGGACAAGTTCCGTGGACTGGA...GGCCCACCTGTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp CTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACAGGTGGGCCACTTTGGATGAACCCTaGGGCACGAGCGAGGCACCA +
Preference number: 5 (lower is better)
Translates to: LGERPFSTKLSALMNRWATLDEP*GTSEAP
Trigger: TGGTGCCTCGCTCGTGCCCAAGGGTTCATCCAAAGT...GGCCCACCTGTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp GGAAGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCAAGCTGGCACCGGTCATaGGTCTTATGGTTCACAATC +
Preference number: 5 (lower is better)
Translates to: GRAGNGLGERPFSTKLSASWHRS*VLWFTI
Trigger: GATTGTGAACCATAAGACCAATGACCGGTGCCAGCT...TGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp AGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTACTTGGAGCACTCCATTaGTTCATCCCACGAGCCGGA +
Preference number: 5 (lower is better)
Translates to: RAGNGLGERPFSTKLSALLGALH*FIPRAG
Trigger: TCCGGCTCGTGGGATGAACAAATGGAGTGCTCCAAG...TAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000535268.5
CDS-3UTR CAA 90 bp AGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTATTCTTCCACAGCAGCTaGGCTGACAGGGTCTGGTAC +
Preference number: 5 (lower is better)
Translates to: RAGNGLGERPFSTKLSALFFHSS*ADRVWY
Trigger: GTACCAGACCCTGTCAGCCAAGCTGCTGTGGAAGAA...TAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000535268.5
CDS-3UTR CAA 90 bp CTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACAGGTGGGCCTGCAGGCGCCTGTATTaGTTGCAAGGGTGGCGCTCA +
Preference number: 5 (lower is better)
Translates to: LGERPFSTKLSALMNRWACRRLY*LQGWRS
Trigger: TGAGCGCCACCCTTGCAACAAATACAGGCGCCTGCA...GGCCCACCTGTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp TACCATCGAGGACTTGATATGTTGAGCTACAAAATTCTCCCAACTCAAAGCGGTCTCTCAGATGGGATCTaGAGGCCGTCCAGCTCTGTC +
Preference number: 5 (lower is better)
Translates to: YHRGLDMLSYKILPTQSGLSDGI*RPSSSV
Trigger: GACAGAGCTGGACGGCCTCAAGATCCCATCTGAGAG...ACCGCTTTGAGTTGGGAGAATTTTGTAGCTCAACATATCAAGTCCTCGATGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000437268.6
CDS-3UTR CAA 90 bp CTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACAGGTGGGCCTCACTGTCCTCTCCTTaGGGAGTCAAGAGGCTTCCC +
Preference number: 5 (lower is better)
Translates to: LGERPFSTKLSALMNRWASLSSP*GVKRLP
Trigger: GGGAAGCCTCTTGACTCCCAAAGGAGAGGACAGTGA...GGCCCACCTGTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp AGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAGCACCATCTAGTACATaGTCTGCTGAGCTCCAGTCC +
Preference number: 5 (lower is better)
Translates to: RAGNGLGERPFSTKLSALAPSST*SAELQS
Trigger: GGACTGGAGCTCAGCAGACAATGTACTAGATGGTGC...TAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp GGAAGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCACTGCTATGCATGACCTaGGAGCACTCCATTTGTTCA +
Preference number: 5 (lower is better)
Translates to: GRAGNGLGERPFSTKLSALLCMT*EHSICS
Trigger: TGAACAAATGGAGTGCTCCAAGGTCATGCATAGCAG...TGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000535268.5
CDS-3UTR CAA 90 bp TACCATCGAGGACTTGATATGTTGAGCTACAAAATTCTCCCAACTCAAAGCGGTTGCAGGCGCCTGTATTaGTTGCAAGGGTGGCGCTCA +
Preference number: 5 (lower is better)
Translates to: YHRGLDMLSYKILPTQSGCRRLY*LQGWRS
Trigger: TGAGCGCCACCCTTGCAACAAATACAGGCGCCTGCA...ACCGCTTTGAGTTGGGAGAATTTTGTAGCTCAACATATCAAGTCCTCGATGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp GGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACTGCAGGCGCCTGTATTaGTTGCAAGGGTGGCGCTCA +
Preference number: 5 (lower is better)
Translates to: GNGLGERPFSTKLSALMNCRRLY*LQGWRS
Trigger: TGAGCGCCACCCTTGCAACAAATACAGGCGCCTGCA...GTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp AGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTATTCATTATTGCTGATTaGGGGCCTGGGTCTCAGGGC +
Preference number: 5 (lower is better)
Translates to: RAGNGLGERPFSTKLSALFIIAD*GPGSQG
Trigger: GCCCTGAGACCCAGGCCCCAAATCAGCAATAATGAA...TAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp TGTGGCAAGAAAGCACACTTGGAAAGCTGTCTGCTAAGTGCGGTACTAAAAATAACTCGCCTCTTGACTTaGGATGAACCCTTGGGCACG +
Preference number: 5 (lower is better)
Translates to: CGKKAHLESCLLSAVLKITRLLT*DEPLGT
Trigger: CGTGCCCAAGGGTTCATCCAAAGTCAAGAGGCGAGT...TATTTTTAGTACCGCACTTAGCAGACAGCTTTCCAAGTGTGCTTTCTTGCCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp CTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACAGGTGGGCCATGCGGACTCGCCTCTaGACTTTGGATGAACCCTTG +
Preference number: 5 (lower is better)
Translates to: LGERPFSTKLSALMNRWAMRTRL*TLDEPL
Trigger: CAAGGGTTCATCCAAAGTCAAGAGGCGAGTCCGCAT...GGCCCACCTGTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp TGTGGCAAGAAAGCACACTTGGAAAGCTGTCTGCTAAGTGCGGTACTAAAAATACTTGGAGCACTCCATTaGTTCATCCCACGAGCCGGA +
Preference number: 5 (lower is better)
Translates to: CGKKAHLESCLLSAVLKILGALH*FIPRAG
Trigger: TCCGGCTCGTGGGATGAACAAATGGAGTGCTCCAAG...TATTTTTAGTACCGCACTTAGCAGACAGCTTTCCAAGTGTGCTTTCTTGCCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000535268.5
CDS-3UTR CAA 90 bp TACCATCGAGGACTTGATATGTTGAGCTACAAAATTCTCCCAACTCAAAGCGGTGCACATATGCCAGTCTaGCTTCTCCTTGGCCTCCCA +
Preference number: 5 (lower is better)
Translates to: YHRGLDMLSYKILPTQSGAHMPV*LLLGLP
Trigger: TGGGAGGCCAAGGAGAAGCAAGACTGGCATATGTGC...ACCGCTTTGAGTTGGGAGAATTTTGTAGCTCAACATATCAAGTCCTCGATGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp TACCATCGAGGACTTGATATGTTGAGCTACAAAATTCTCCCAACTCAAAGCGGTAGGCGCCTGTATTTGTaGCAAGGGTGGCGCTCAGAA +
Preference number: 5 (lower is better)
Translates to: YHRGLDMLSYKILPTQSGRRLYL*QGWRSE
Trigger: TTCTGAGCGCCACCCTTGCAACAAATACAGGCGCCT...ACCGCTTTGAGTTGGGAGAATTTTGTAGCTCAACATATCAAGTCCTCGATGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp CTCAAATCCACATGGGGGTTACCATCAGTACCCCCTCCTGCATCTGTGGATGGGCCATTCAGTACTAAATaGAGTGCATTAATGAACAGG +
Preference number: 5 (lower is better)
Translates to: LKSTWGLPSVPPPASVDGPFSTK*SALMNR
Trigger: CCTGTTCATTAATGCACTCAATTTAGTACTGAATGG...CCCATCCACAGATGCAGGAGGGGGTACTGATGGTAACCCCCATGTGGATTTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp CTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACAGGTGGGCCTTCATTATTGCTGATTaGGGGCCTGGGTCTCAGGGC +
Preference number: 5 (lower is better)
Translates to: LGERPFSTKLSALMNRWAFIIAD*GPGSQG
Trigger: GCCCTGAGACCCAGGCCCCAAATCAGCAATAATGAA...GGCCCACCTGTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp TGTGGCAAGAAAGCACACTTGGAAAGCTGTCTGCTAAGTGCGGTACTAAAAATATTGGCGATGAGGTCATaGCACGTGCTGAGGTCATCT +
Preference number: 5 (lower is better)
Translates to: CGKKAHLESCLLSAVLKILAMRS*HVLRSS
Trigger: AGATGACCTCAGCACGTGCAATGACCTCATCGCCAA...TATTTTTAGTACCGCACTTAGCAGACAGCTTTCCAAGTGTGCTTTCTTGCCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000437268.6
CDS-3UTR CAA 90 bp GGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACTTGGCGATGAGGTCATaGCACGTGCTGAGGTCATCT +
Preference number: 5 (lower is better)
Translates to: GNGLGERPFSTKLSALMNLAMRS*HVLRSS
Trigger: AGATGACCTCAGCACGTGCAATGACCTCATCGCCAA...GTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000437268.6
ENST00000438716.3
CDS-3UTR CAA 90 bp CTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACAGGTGGGCCGCGTTGATCATAGCATaGGATGTGATGCGGAAGAGG +
Preference number: 5 (lower is better)
Translates to: LGERPFSTKLSALMNRWAALIIA*DVMRKR
Trigger: CCTCTTCCGCATCACATCCAATGCTATGATCAACGC...GGCCCACCTGTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000437268.6
ENST00000438716.3
CDS-3UTR CAA 90 bp CTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACAGGTGGGCCAAGTCCCTGCAGGCGTaGATCATAGCATTGGATGTG +
Preference number: 5 (lower is better)
Translates to: LGERPFSTKLSALMNRWAKSLQA*IIALDV
Trigger: CACATCCAATGCTATGATCAACGCCTGCAGGGACTT...GGCCCACCTGTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000437268.6
ENST00000438716.3
CDS-3UTR CAA 90 bp CTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACAGGTGGGCCTATTTTCCCCGGAACTaGCTGGAGATGGTGATCTCC +
Preference number: 5 (lower is better)
Translates to: LGERPFSTKLSALMNRWAYFPRN*LEMVIS
Trigger: GGAGATCACCATCTCCAGCAAGTTCCGGGGAAAATA...GGCCCACCTGTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp AGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTACTGCTATGCATGACCTaGGAGCACTCCATTTGTTCA +
Preference number: 5 (lower is better)
Translates to: RAGNGLGERPFSTKLSALLLCMT*EHSICS
Trigger: TGAACAAATGGAGTGCTCCAAGGTCATGCATAGCAG...TAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000535268.5
CDS-3UTR CAA 90 bp GGAAGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCACGAGGACTTGATATGTaGAGCTACAAAATTCTCCCA +
Preference number: 5 (lower is better)
Translates to: GRAGNGLGERPFSTKLSARGLDM*SYKILP
Trigger: TGGGAGAATTTTGTAGCTCAACATATCAAGTCCTCG...TGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp AGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAAGGGTTTGTTCATTATaGCTGATTTGGGGCCTGGGT +
Preference number: 5 (lower is better)
Translates to: RAGNGLGERPFSTKLSALRVCSL*LIWGLG
Trigger: ACCCAGGCCCCAAATCAGCAATAATGAACAAACCCT...TAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp CTGCCTTCACACTGGGATGTCGGCTGCATAATACTGTTCTCTGCCCATGTGTGGTTCTATTTGTTCTCTTaGGACTTTCCTATGCCACAT +
Preference number: 5 (lower is better)
Translates to: LPSHWDVGCIILFSAHVWFYLFS*DFPMPH
Trigger: ATGTGGCATAGGAAAGTCCAAAGAGAACAAATAGAA...CCACACATGGGCAGAGAACAGTATTATGCAGCCGACATCCCAGTGTGAAGGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433183.2
CDS-3UTR CAA 90 bp GGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACGCGTTGATCATAGCATaGGATGTGATGCGGAAGAGG +
Preference number: 5 (lower is better)
Translates to: GNGLGERPFSTKLSALMNALIIA*DVMRKR
Trigger: CCTCTTCCGCATCACATCCAATGCTATGATCAACGC...GTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000437268.6
ENST00000438716.3
CDS-3UTR CAA 90 bp GGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACTATTTTCCCCGGAACTaGCTGGAGATGGTGATCTCC +
Preference number: 5 (lower is better)
Translates to: GNGLGERPFSTKLSALMNYFPRN*LEMVIS
Trigger: GGAGATCACCATCTCCAGCAAGTTCCGGGGAAAATA...GTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp TACCATCGAGGACTTGATATGTTGAGCTACAAAATTCTCCCAACTCAAAGCGGTTATTTTCCCCGGAACTaGCTGGAGATGGTGATCTCC +
Preference number: 5 (lower is better)
Translates to: YHRGLDMLSYKILPTQSGYFPRN*LEMVIS
Trigger: GGAGATCACCATCTCCAGCAAGTTCCGGGGAAAATA...ACCGCTTTGAGTTGGGAGAATTTTGTAGCTCAACATATCAAGTCCTCGATGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp CTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACAGGTGGGCCCTGCTATGCATGACCTaGGAGCACTCCATTTGTTCA +
Preference number: 5 (lower is better)
Translates to: LGERPFSTKLSALMNRWALLCMT*EHSICS
Trigger: TGAACAAATGGAGTGCTCCAAGGTCATGCATAGCAG...GGCCCACCTGTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000535268.5
CDS-3UTR CAA 90 bp CTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACAGGTGGGCCAGGGTTTGTTCATTATaGCTGATTTGGGGCCTGGGT +
Preference number: 5 (lower is better)
Translates to: LGERPFSTKLSALMNRWARVCSL*LIWGLG
Trigger: ACCCAGGCCCCAAATCAGCAATAATGAACAAACCCT...GGCCCACCTGTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp TACCATCGAGGACTTGATATGTTGAGCTACAAAATTCTCCCAACTCAAAGCGGTAGGGTTTGTTCATTATaGCTGATTTGGGGCCTGGGT +
Preference number: 5 (lower is better)
Translates to: YHRGLDMLSYKILPTQSGRVCSL*LIWGLG
Trigger: ACCCAGGCCCCAAATCAGCAATAATGAACAAACCCT...ACCGCTTTGAGTTGGGAGAATTTTGTAGCTCAACATATCAAGTCCTCGATGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp GGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACAGGGTTTGTTCATTATaGCTGATTTGGGGCCTGGGT +
Preference number: 5 (lower is better)
Translates to: GNGLGERPFSTKLSALMNRVCSL*LIWGLG
Trigger: ACCCAGGCCCCAAATCAGCAATAATGAACAAACCCT...GTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS TCA 90 bp GGTTGGTTCATGAGGTTTAAGGAAATAAGCCATCTCCATGACGGATaGGCAGAGTGGTTTCTTGAGATGAAATCTAATCCTGGTGAAGAT +
Preference number: 5 (lower is better)
Translates to: GWFMRFKEISHLHDG*AEWFLEMKSNPGED
Trigger: ATCTTCACCAGGATTAGATTTCATCTCAAGAAACCACTCTGCTCATCCGTCATGGAGATGGCTTATTTCCTTAAACCTCATGAACCAACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464341.1
CDS-3UTR CAA 90 bp AGGGCTGGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTACCATTCAGTACTAAATaGAGTGCATTAATGAACAGG +
Preference number: 5 (lower is better)
Translates to: RAGNGLGERPFSTKLSALPFSTK*SALMNR
Trigger: CCTGTTCATTAATGCACTCAATTTAGTACTGAATGG...TAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCCAGCCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp TGTGGCAAGAAAGCACACTTGGAAAGCTGTCTGCTAAGTGCGGTACTAAAAATACGAGGACTTGATATGTaGAGCTACAAAATTCTCCCA +
Preference number: 5 (lower is better)
Translates to: CGKKAHLESCLLSAVLKIRGLDM*SYKILP
Trigger: TGGGAGAATTTTGTAGCTCAACATATCAAGTCCTCG...TATTTTTAGTACCGCACTTAGCAGACAGCTTTCCAAGTGTGCTTTCTTGCCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000535268.5
CDS-3UTR CAA 90 bp GGGAATGGGCTGGGAGAAAGACCATTCAGTACTAAATTGAGTGCATTAATGAACCCATTCAGTACTAAATaGAGTGCATTAATGAACAGG +
Preference number: 5 (lower is better)
Translates to: GNGLGERPFSTKLSALMNPFSTK*SALMNR
Trigger: CCTGTTCATTAATGCACTCAATTTAGTACTGAATGG...GTTCATTAATGCACTCAATTTAGTACTGAATGGTCTTTCTCCCAGCCCATTCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000452656.5
ENST00000535268.5
CDS CAA 72 bp TCGGCGGGGCGCTACATGGCGCCGGGTCCCGGGGGCTaGCACGGACGCGTGCACAGCTCGGTGGGCCGCCCG +
Preference number: 6 (lower is better)
Translates to: SAGRYMAPGPGG*HGRVHSSVGRP
Trigger: CGGGCGGCCCACCGAGCTGTGCACGCGTCCGTGCAAGCCCCCGGGACCCGGCGCCATGTAGCGCCCCGCCGA
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437268.6
CDS CAA 90 bp AGCCTCCAATCGGCGGGGCGCTACATGGCGCCGGGTCCCGGGGGCTaGCACGGACGCGTGCACAGCTCGGTGGGCCGCCCGGCGGAGGCG +
Preference number: 6 (lower is better)
Translates to: SLQSAGRYMAPGPGG*HGRVHSSVGRPAEA
Trigger: CGCCTCCGCCGGGCGGCCCACCGAGCTGTGCACGCGTCCGTGCAAGCCCCCGGGACCCGGCGCCATGTAGCGCCCCGCCGATTGGAGGCT
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437268.6
CDS GCA 72 bp TGGGCTCCGGCCCGGAGCCGGACGTGGAAGCGCTCATaGCCGGCGCCGCCGTGTGGCACGACAGGCAGGGGA +
Preference number: 6 (lower is better)
Translates to: WAPARSRTWKRS*PAPPCGTTGRG
Trigger: TCCCCTGCCTGTCGTGCCACACGGCGGCGCCGGGCATGAGCGCTTCCACGTCCGGCTCCGGGCCGGAGCCCA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332585.11
ENST00000446658.6
CDS TCA 72 bp GCGCCGCCGTGTGGCACGACAGGCAGGGGACAACCGTaGACAGCGACGAGAGCCCGCGGGAGCGGCCGCCAC +
Preference number: 6 (lower is better)
Translates to: APPCGTTGRGQP*TATRARGSGRH
Trigger: GTGGCGGCCGCTCCCGCGGGCTCTCGTCGCTGTTCACGGTTGTCCCCTGCCTGTCGTGCCACACGGCGGCGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332585.11
ENST00000446658.6
CDS GCA 72 bp TCCCAGGGAGGGGCTCTCGGGTGTGGACGTGGGTCCTaGCCCGAGGCTGCGAGGGCTCTTGCAGCTGCTGCT +
Preference number: 6 (lower is better)
Translates to: SQGGALGCGRGS*PEAARALAAAA
Trigger: AGCAGCAGCTGCAAGAGCCCTCGCAGCCTCGGGGCAGGACCCACGTCCACACCCGAGAGCCCCTCCCTGGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424224.5
CDS CCA 72 bp CCGGACGTGGAAGCGCTCATGCCCGGCGCCGCCGTGTaGCACGACAGGCAGGGGACAACCGTGAACAGCGAC +
Preference number: 6 (lower is better)
Translates to: PDVEALMPGAAV*HDRQGTTVNSD
Trigger: GTCGCTGTTCACGGTTGTCCCCTGCCTGTCGTGCCACACGGCGGCGCCGGGCATGAGCGCTTCCACGTCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332585.11
ENST00000446658.6
CDS CCA 72 bp TTGGCCTCGTCCCAACGGCCCTTCTCCATCAGCCGCTaGTCGGGCCGCAGGCGGCTGTCGGTTGGCGCTACG +
Preference number: 6 (lower is better)
Translates to: LASSQRPFSISR*SGRRRLSVGAT
Trigger: CGTAGCGCCAACCGACAGCCGCCTGCGGCCCGACCAGCGGCTGATGGAGAAGGGCCGTTGGGACGAGGCCAA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000446658.6
ENST00000452656.5
ENST00000535268.5
CDS TCA 72 bp TGGCACTGCCTCCGAAACTGCCTCCGACACCTGTTCTaGCAGCGGTCCCCGCTCCGGTTCGGGCACGGGCTG +
Preference number: 6 (lower is better)
Translates to: WHCLRNCLRHLF*QRSPLRFGHGL
Trigger: CAGCCCGTGCCCGAACCGGAGCGGGGACCGCTGTCAGAACAGGTGTCGGAGGCAGTTTCGGAGGCAGTGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332585.11
ENST00000446658.6
CDS TCA 72 bp GGGGCTTTAACGCTGGCAGCGATCCTGACTCGGGTCTaGGAAAGGTCGCGCTCCCCACCGCCCGGGAGAGCG +
Preference number: 6 (lower is better)
Translates to: GALTLAAILTRV*ERSRSPPPGRA
Trigger: CGCTCTCCCGGGCGGTGGGGAGCGCGACCTTTCTCAGACCCGAGTCAGGATCGCTGCCAGCGTTAAAGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332585.11
ENST00000446658.6
CDS CCA 72 bp CGACCCCTGCAGCAGTTCCGATGGCTGCCCAGCCCCTaGCTCCGGCTCAGACGTCGTCTCGGACACAGGTTC +
Preference number: 6 (lower is better)
Translates to: RPLQQFRWLPSP*LRLRRRLGHRF
Trigger: GAACCTGTGTCCGAGACGACGTCTGAGCCGGAGCCAGGGGCTGGGCAGCCATCGGAACTGCTGCAGGGGTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332585.11
ENST00000446658.6
CDS GCA 72 bp AGCGTAGGTGCAGACTCTGCCCTGGGCCCCCTGGGGTaGTTAGAGGTGGCTGGTCCTGCTTACCTTCCGGGC +
Preference number: 6 (lower is better)
Translates to: SVGADSALGPLG*LEVAGPAYLPG
Trigger: GCCCGGAAGGTAAGCAGGACCAGCCACCTCTAAGCACCCCAGGGGGCCCAGGGCAGAGTCTGCACCTACGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433183.2
ENST00000496575.1
CDS CAA 72 bp GTCAAGAGGCTTCCCTCAATGAAGCTCTTGGAGGGGTaGGCCGGCCGGCCAGGGGCACTGTGGAAGGCCCGC +
Preference number: 6 (lower is better)
Translates to: VKRLPSMKLLEG*AGRPGALWKAR
Trigger: GCGGGCCTTCCACAGTGCCCCTGGCCGGCCGGCCAACCCCTCCAAGAGCTTCATTGAGGGAAGCCTCTTGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000407373.5
ENST00000424224.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000446658.6
ENST00000452656.5
ENST00000453621.5
ENST00000454145.5
ENST00000535268.5
CDS CAA 72 bp GTCAAGAGGTCACCCTCAATGAAGCTCTTGGAGGGGTaGGCCGGCCGGCCAGGGGCACTGTGGAAGGCCCGC +
Preference number: 6 (lower is better)
Translates to: VKRSPSMKLLEG*AGRPGALWKAR
Trigger: GCGGGCCTTCCACAGTGCCCCTGGCCGGCCGGCCAACCCCTCCAAGAGCTTCATTGAGGGTGACCTCTTGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403222.7
CDS CAA 90 bp CCTTTGGGAGTCAAGAGGCTTCCCTCAATGAAGCTCTTGGAGGGGTaGGCCGGCCGGCCAGGGGCACTGTGGAAGGCCCGCTCGAGGCTG +
Preference number: 6 (lower is better)
Translates to: PLGVKRLPSMKLLEG*AGRPGALWKARSRL
Trigger: CAGCCTCGAGCGGGCCTTCCACAGTGCCCCTGGCCGGCCGGCCAACCCCTCCAAGAGCTTCATTGAGGGAAGCCTCTTGACTCCCAAAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000407373.5
ENST00000424224.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000446658.6
ENST00000452656.5
ENST00000453621.5
ENST00000454145.5
ENST00000535268.5
CDS CAA 90 bp CCTTTGGGAGTCAAGAGGTCACCCTCAATGAAGCTCTTGGAGGGGTaGGCCGGCCGGCCAGGGGCACTGTGGAAGGCCCGCTCGAGGCTG +
Preference number: 6 (lower is better)
Translates to: PLGVKRSPSMKLLEG*AGRPGALWKARSRL
Trigger: CAGCCTCGAGCGGGCCTTCCACAGTGCCCCTGGCCGGCCGGCCAACCCCTCCAAGAGCTTCATTGAGGGTGACCTCTTGACTCCCAAAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403222.7
CDS GCA 72 bp TGTGGACATTGGCAGGACCAGCGTAGGTGCAGACTCTaGCCTGGGCCCCCTGGGGTGCTTAGAGGTGGCTGG +
Preference number: 6 (lower is better)
Translates to: CGHWQDQRRCRL*PGPPGVLRGGW
Trigger: CCAGCCACCTCTAAGCACCCCAGGGGGCCCAGGGCAGAGTCTGCACCTACGCTGGTCCTGCCAATGTCCACA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433183.2
ENST00000496575.1
CDS GCA 72 bp CGCCTCCACCTCCTGAGCCAGCTGGCCTACGGTTCATaGCAAGGCGCTTCGCTGCCAGTGACGACATCGTTC +
Preference number: 6 (lower is better)
Translates to: RLHLLSQLAYGS*QGASLPVTTSF
Trigger: GAACGATGTCGTCACTGGCAGCGAAGCGCCTTGGCATGAACCGTAGGCCAGCTGGCTCAGGAGGTGGAGGCG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000403222.7
ENST00000407373.5
ENST00000438716.3
CDS GCA 72 bp CCTGGGCCCCCTGGGGTGCTTAGAGGTGGCTGGTCCTaGTTACCTTCCGGGCTGCCTCTTTGGAGAAGTAGC +
Preference number: 6 (lower is better)
Translates to: PGPPGVLRGGWS*LPSGLPLWRSS
Trigger: GCTACTTCTCCAAAGAGGCAGCCCGGAAGGTAAGCAGGACCAGCCACCTCTAAGCACCCCAGGGGGCCCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433183.2
ENST00000496575.1
CDS CCA 72 bp GGGATCTTGAGGCCGTCCAGCTCTGTCAGGGAGCGCTaGAGTGCAGCGCCGTGCTTGGCGATGAGGTCATTG +
Preference number: 6 (lower is better)
Translates to: GILRPSSSVRER*SAAPCLAMRSL
Trigger: CAATGACCTCATCGCCAAGCACGGCGCTGCACTCCAGCGCTCCCTGACAGAGCTGGACGGCCTCAAGATCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000424224.5
ENST00000437268.6
ENST00000438716.3
ENST00000445781.5
ENST00000446658.6
ENST00000477355.5
ENST00000496367.1
CDS CAA 72 bp CCTTTGGGAGTCAAGAGGCTTCCCTCAATGAAGCTCTaGGAGGGGTTGGCCGGCCGGCCAGGGGCACTGTGG +
Preference number: 6 (lower is better)
Translates to: PLGVKRLPSMKL*EGLAGRPGALW
Trigger: CCACAGTGCCCCTGGCCGGCCGGCCAACCCCTCCAAGAGCTTCATTGAGGGAAGCCTCTTGACTCCCAAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000407373.5
ENST00000424224.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000446658.6
ENST00000452656.5
ENST00000453621.5
ENST00000454145.5
ENST00000535268.5
CDS CAA 90 bp GCCACCAGGCACATCTGCTCCACTGAGCTGGTGCAGTGCACTGCCTaGTCCAGCAGGTGGTGGTACTCCAGGTCCTCTGTCAGCCGCTGG +
Preference number: 6 (lower is better)
Translates to: ATRHICSTELVQCTA*SSRWWYSRSSVSRW
Trigger: CCAGCGGCTGACAGAGGACCTGGAGTACCACCACCTGCTGGACAAGGCAGTGCACTGCACCAGCTCAGTGGAGCAGATGTGCCTGGTGGC
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000446658.6
ENST00000452656.5
ENST00000453621.5
ENST00000535268.5
CDS CAA 90 bp CGCTCATTCACCACCTTCAGCTTCTCCCCACTCTCAGATGGGATCTaGAGGCCGTCCAGCTCTGTCAGGGAGCGCTGGAGTGCAGCGCCG +
Preference number: 6 (lower is better)
Translates to: RSFTTFSFSPLSDGI*RPSSSVRERWSAAP
Trigger: CGGCGCTGCACTCCAGCGCTCCCTGACAGAGCTGGACGGCCTCAAGATCCCATCTGAGAGTGGGGAGAAGCTGAAGGTGGTGAATGAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000424224.5
ENST00000437268.6
ENST00000438716.3
ENST00000445781.5
ENST00000446658.6
ENST00000496367.1
CDS GCA 72 bp GCCACCAGGCACATCTGCTCCACTGAGCTGGTGCAGTaGACTGCCTTGTCCAGCAGGTGGTGGTACTCCAGG +
Preference number: 6 (lower is better)
Translates to: ATRHICSTELVQ*TALSSRWWYSR
Trigger: CCTGGAGTACCACCACCTGCTGGACAAGGCAGTGCACTGCACCAGCTCAGTGGAGCAGATGTGCCTGGTGGC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000446658.6
ENST00000452656.5
ENST00000453621.5
ENST00000535268.5
CDS GCA 72 bp GTTCATCCCACGAGCCGGACAGCACGTAATGGGCCTTaGCCTGGCTGTCACTCACCACTCCTGTCACCTTCC +
Preference number: 6 (lower is better)
Translates to: VHPTSRTARNGP*PGCHSPLLSPS
Trigger: GGAAGGTGACAGGAGTGGTGAGTGACAGCCAGGGCAAGGCCCATTACGTGCTGTCCGGCTCGTGGGATGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000446658.6
ENST00000535268.5
CDS CCA 72 bp CGGCTCAGACGTCGTCTCGGACACAGGTTCCGATCTTaGCACTGCCTCCGAAACTGCCTCCGACACCTGTTC +
Preference number: 6 (lower is better)
Translates to: RLRRRLGHRFRS*HCLRNCLRHLF
Trigger: GAACAGGTGTCGGAGGCAGTTTCGGAGGCAGTGCCAAGATCGGAACCTGTGTCCGAGACGACGTCTGAGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332585.11
ENST00000446658.6
CDS CCA 72 bp ATTCTTCAGGGTGTGGTGCAGCTCGCTCTTGTCGGCTaGGGTGGTAGCCTCGTCGTCGTCCCCAGAGTCATC +
Preference number: 6 (lower is better)
Translates to: ILQGVVQLALVG*GGSLVVVPRVI
Trigger: GATGACTCTGGGGACGACGACGAGGCTACCACCCCAGCCGACAAGAGCGAGCTGCACCACACCCTGAAGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000424224.5
ENST00000437268.6
ENST00000438716.3
ENST00000445781.5
ENST00000446658.6
ENST00000477355.5
ENST00000496367.1
CDS CCA 72 bp AGCAGGTGGTGGTACTCCAGGTCCTCTGTCAGCCGCTaGAGCATGGACAGGGGCTCATTGAAGTTCACCGGC +
Preference number: 6 (lower is better)
Translates to: SRWWYSRSSVSR*SMDRGSLKFTG
Trigger: GCCGGTGAACTTCAATGAGCCCCTGTCCATGCTCCAGCGGCTGACAGAGGACCTGGAGTACCACCACCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000446658.6
ENST00000452656.5
ENST00000453621.5
ENST00000535268.5
CDS CCA 72 bp CCCGGTCAGCGGATCCAGCCTCTTCTCAAACCACAGTaGCGTGTAGGCATCCGCCTCCTTCTCTTCCTCCGA +
Preference number: 6 (lower is better)
Translates to: PGQRIQPLLKPQ*RVGIRLLLFLR
Trigger: TCGGAGGAAGAGAAGGAGGCGGATGCCTACACGCCACTGTGGTTTGAGAAGAGGCTGGATCCGCTGACCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000438716.3
ENST00000446658.6
ENST00000452656.5
ENST00000535268.5
CDS CCA 72 bp CCCGGTCAGCGGATCCAGCCTCTTCTCAAACCACAGTaGCGTGTAGGCATCCGCCTCCTTCTCTGCTTCCTC +
Preference number: 6 (lower is better)
Translates to: PGQRIQPLLKPQ*RVGIRLLLCFL
Trigger: GAGGAAGCAGAGAAGGAGGCGGATGCCTACACGCCACTGTGGTTTGAGAAGAGGCTGGATCCGCTGACCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437268.6
CDS CAA 72 bp AGGGAAAGATTCTTCAGGGTGTGGTGCAGCTCGCTCTaGTCGGCTGGGGTGGTAGCCTCGTCGTCGTCCCCA +
Preference number: 6 (lower is better)
Translates to: RERFFRVWCSSL*SAGVVASSSSP
Trigger: TGGGGACGACGACGAGGCTACCACCCCAGCCGACAAGAGCGAGCTGCACCACACCCTGAAGAATCTTTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000424224.5
ENST00000437268.6
ENST00000438716.3
ENST00000445781.5
ENST00000446658.6
ENST00000477355.5
ENST00000496367.1
CDS TCA 72 bp CTCCGGCAGCGGGTACTTCTTCCACAGCAGCTTGGCTaGCAGGGTCTGGTACACTGTCTTCTGCTTCCCGTC +
Preference number: 6 (lower is better)
Translates to: LRQRVLLPQQLG*QGLVHCLLLPV
Trigger: GACGGGAAGCAGAAGACAGTGTACCAGACCCTGTCAGCCAAGCTGCTGTGGAAGAAGTACCCGCTGCCGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000446658.6
ENST00000535268.5
CDS CAA 72 bp CAAGAGTCCTCCGTGTCAATGTGCGCGGTGGACAGGTaGATGGTTCCACGGCACGTGTGGGCCATTTCACCC +
Preference number: 6 (lower is better)
Translates to: QESSVSMCAVDR*MVPRHVWAISP
Trigger: GGGTGAAATGGCCCACACGTGCCGTGGAACCATCAACCTGTCCACCGCGCACATTGACACGGAGGACTCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000438716.3
ENST00000446658.6
CDS CAA 90 bp TCTAACTTCAGGGAAAGATTCTTCAGGGTGTGGTGCAGCTCGCTCTaGTCGGCTGGGGTGGTAGCCTCGTCGTCGTCCCCAGAGTCATCC +
Preference number: 6 (lower is better)
Translates to: SNFRERFFRVWCSSL*SAGVVASSSSPESS
Trigger: GGATGACTCTGGGGACGACGACGAGGCTACCACCCCAGCCGACAAGAGCGAGCTGCACCACACCCTGAAGAATCTTTCCCTGAAGTTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424224.5
ENST00000437268.6
CDS TCA 72 bp AAGAGTCCTCCGTGTCAATGTGCGCGGTGGACAGGTTaGTGGTTCCACGGCACGTGTGGGCCATTTCACCCT +
Preference number: 6 (lower is better)
Translates to: KSPPCQCARWTG*WFHGTCGPFHP
Trigger: AGGGTGAAATGGCCCACACGTGCCGTGGAACCATCAACCTGTCCACCGCGCACATTGACACGGAGGACTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332585.11
ENST00000403222.7
ENST00000407373.5
ENST00000438716.3
ENST00000446658.6
CDS CAA 90 bp TCTAACTTCAGGGAAAGATTCTTCAGGGTGTGGTGCAGCTCGCTCTaGTCGGCTGGGGTGGTAGCCTCGTCGTCGTCCCCAGAGTCATCT +
Preference number: 6 (lower is better)
Translates to: SNFRERFFRVWCSSL*SAGVVASSSSPESS
Trigger: AGATGACTCTGGGGACGACGACGAGGCTACCACCCCAGCCGACAAGAGCGAGCTGCACCACACCCTGAAGAATCTTTCCCTGAAGTTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000438716.3
ENST00000445781.5
ENST00000446658.6
ENST00000477355.5
ENST00000496367.1
CDS TCA 72 bp TGTAGTTGGGCTTGTTGGGAATGCGGACTCGCCTCTTaGCTTTGGATGAACCCTTGGGCACGAGCGAGGCAC +
Preference number: 6 (lower is better)
Translates to: CSWACWECGLAS*LWMNPWARARH
Trigger: GTGCCTCGCTCGTGCCCAAGGGTTCATCCAAAGTCAAGAGGCGAGTCCGCATTCCCAACAAGCCCAACTACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000424224.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000446658.6
ENST00000452656.5
ENST00000453621.5
ENST00000535268.5
CDS GCA 72 bp GTTTCCTCCAAGTGCACGCGCTGCTCCTGCTCATACTaGAGTGCCCGCTGCCATTTCCGACTGTGTATCTCT +
Preference number: 6 (lower is better)
Translates to: VSSKCTRCSCSY*SARCHFRLCIS
Trigger: AGAGATACACAGTCGGAAATGGCAGCGGGCACTGCAGTATGAGCAGGAGCAGCGCGTGCACTTGGAGGAAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000424224.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000446658.6
ENST00000452656.5
ENST00000453621.5
ENST00000454145.5
ENST00000535268.5
CDS CAA 72 bp TTGGGCTTGTTGGGAATGCGGACTCGCCTCTTGACTTaGGATGAACCCTTGGGCACGAGCGAGGCACCATCT +
Preference number: 6 (lower is better)
Translates to: LGLLGMRTRLLT*DEPLGTSEAPS
Trigger: AGATGGTGCCTCGCTCGTGCCCAAGGGTTCATCCAAAGTCAAGAGGCGAGTCCGCATTCCCAACAAGCCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000424224.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000446658.6
ENST00000452656.5
ENST00000453621.5
ENST00000535268.5
CDS CAA 90 bp GGCTTGTTGGGAATGCGGACTCGCCTCTTGACTTTGGATGAACCCTaGGGCACGAGCGAGGCACCATCTAGTACATTGTCTGCTGAGCTC +
Preference number: 6 (lower is better)
Translates to: GLLGMRTRLLTLDEP*GTSEAPSSTLSAEL
Trigger: GAGCTCAGCAGACAATGTACTAGATGGTGCCTCGCTCGTGCCCAAGGGTTCATCCAAAGTCAAGAGGCGAGTCCGCATTCCCAACAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000424224.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000446658.6
ENST00000452656.5
ENST00000453621.5
ENST00000535268.5
CDS CAA 90 bp TGGATGGCACCTAGCGGCATGATGGAGATGTATTTTCCCCGGAACTaGCTGGAGATGGTGATCTCCTGCCAGAGGCTCCAGCCATGCTTG +
Preference number: 6 (lower is better)
Translates to: WMAPSGMMEMYFPRN*LEMVISCQRLQPCL
Trigger: CAAGCATGGCTGGAGCCTCTGGCAGGAGATCACCATCTCCAGCAAGTTCCGGGGAAAATACATCTCCATCATGCCGCTAGGTGCCATCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000446658.6
ENST00000452656.5
ENST00000535268.5
CDS TCA 72 bp TGGCCTACGGTTCATGCCAAGGCGCTTCGCTGCCAGTaGCGACATCGTTCGGGTTCTCTGTCTGTGCATTTT +
Preference number: 6 (lower is better)
Translates to: WPTVHAKALRCQ*RHRSGSLSVHF
Trigger: AAAATGCACAGACAGAGAACCCGAACGATGTCGTCACTGGCAGCGAAGCGCCTTGGCATGAACCGTAGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438716.3
CDS GCA 72 bp TCATCTAACTTCAGGGAAAGATTCTTCAGGGTGTGGTaGAGCTCGCTCTTGTCGGCTGGGGTGGTAGCCTCG +
Preference number: 6 (lower is better)
Translates to: SSNFRERFFRVW*SSLLSAGVVAS
Trigger: CGAGGCTACCACCCCAGCCGACAAGAGCGAGCTGCACCACACCCTGAAGAATCTTTCCCTGAAGTTAGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000424224.5
ENST00000437268.6
ENST00000438716.3
ENST00000445781.5
ENST00000446658.6
ENST00000477355.5
ENST00000496367.1
CDS GCA 72 bp TGTCTGCTGAGCTCCAGTCCACGGAACTTGTCCCGGTaGTACCTTCAGCTTTTCTGCTGTCTTCCTTGGCCT +
Preference number: 6 (lower is better)
Translates to: CLLSSSPRNLSR*YLQLFCCLPWP
Trigger: AGGCCAAGGAAGACAGCAGAAAAGCTGAAGGTAGCACCGGGACAAGTTCCGTGGACTGGAGCTCAGCAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332585.11
ENST00000407373.5
ENST00000424224.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
ENST00000454145.5
CDS CCA 72 bp AGGTCATCTAACTTCAGGGAAAGATTCTTCAGGGTGTaGTGCAGCTCGCTCTTGTCGGCTGGGGTGGTAGCC +
Preference number: 6 (lower is better)
Translates to: RSSNFRERFFRV*CSSLLSAGVVA
Trigger: GGCTACCACCCCAGCCGACAAGAGCGAGCTGCACCACACCCTGAAGAATCTTTCCCTGAAGTTAGATGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000424224.5
ENST00000437268.6
ENST00000438716.3
ENST00000445781.5
ENST00000446658.6
ENST00000477355.5
ENST00000496367.1
CDS CAA 72 bp CCTAGCGGCATGATGGAGATGTATTTTCCCCGGAACTaGCTGGAGATGGTGATCTCCTGCCAGAGGCTCCAG +
Preference number: 6 (lower is better)
Translates to: PSGMMEMYFPRN*LEMVISCQRLQ
Trigger: CTGGAGCCTCTGGCAGGAGATCACCATCTCCAGCAAGTTCCGGGGAAAATACATCTCCATCATGCCGCTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000446658.6
ENST00000452656.5
ENST00000535268.5
CDS CAA 90 bp AGGCACCATCTAGTACATTGTCTGCTGAGCTCCAGTCCACGGAACTaGTCCCGGTGCTACCTTCAGCTTTTCTGTCTTCCTTGGCCTCGG +
Preference number: 6 (lower is better)
Translates to: RHHLVHCLLSSSPRN*SRCYLQLFCLPWPR
Trigger: CCGAGGCCAAGGAAGACAGAAAAGCTGAAGGTAGCACCGGGACAAGTTCCGTGGACTGGAGCTCAGCAGACAATGTACTAGATGGTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000401475.5
ENST00000403222.7
ENST00000438716.3
ENST00000446658.6
ENST00000453621.5
ENST00000535268.5
CDS TCA 72 bp TGGAGATGTATTTTCCCCGGAACTTGCTGGAGATGGTaGTCTCCTGCCAGAGGCTCCAGCCATGCTTGGAGA +
Preference number: 6 (lower is better)
Translates to: WRCIFPGTCWRW*SPARGSSHAWR
Trigger: TCTCCAAGCATGGCTGGAGCCTCTGGCAGGAGATCACCATCTCCAGCAAGTTCCGGGGAAAATACATCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000446658.6
ENST00000452656.5
ENST00000535268.5
CDS TCA 72 bp TGTCCCCTGACTGGTCGATCCAGAGCTTGCCCACGATaGTGTTGTGAACAGTTGAGGTGCTCTTCCTCCACA +
Preference number: 6 (lower is better)
Translates to: CPLTGRSRACPR*CCEQLRCSSST
Trigger: TGTGGAGGAAGAGCACCTCAACTGTTCACAACATCATCGTGGGCAAGCTCTGGATCGACCAGTCAGGGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000433183.2
ENST00000437268.6
ENST00000438716.3
ENST00000446658.6
ENST00000452656.5
ENST00000496575.1
ENST00000535268.5
CDS CCA 72 bp TTGAGGTGCTCTTCCTCCACACGTAGTGATTCCCACTaGCCTGGAATTCTAAGTGGATGGCACCTAGCGGCA +
Preference number: 6 (lower is better)
Translates to: LRCSSSTRSDSH*PGILSGWHLAA
Trigger: TGCCGCTAGGTGCCATCCACTTAGAATTCCAGGCCAGTGGGAATCACTACGTGTGGAGGAAGAGCACCTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000446658.6
ENST00000452656.5
ENST00000535268.5
CDS CCA 72 bp GGCAGGAACTTCAGCTGGCACCGGTCATTGGTCTTATaGTTCACAATCTCGATGTCCCCTGACTGGTCGATC +
Preference number: 6 (lower is better)
Translates to: GRNFSWHRSLVL*FTISMSPDWSI
Trigger: GATCGACCAGTCAGGGGACATCGAGATTGTGAACCATAAGACCAATGACCGGTGCCAGCTGAAGTTCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000433183.2
ENST00000437268.6
ENST00000438716.3
ENST00000446658.6
ENST00000452656.5
ENST00000496575.1
ENST00000535268.5
CDS CAA 72 bp AGTTCCAAGAAGTCCCTGCAGGCGTTGATCATAGCATaGGATGTGATGCGGAAGAGGGTGGCCCGCTCATTC +
Preference number: 6 (lower is better)
Translates to: SSKKSLQALIIA*DVMRKRVARSF
Trigger: GAATGAGCGGGCCACCCTCTTCCGCATCACATCCAATGCTATGATCAACGCCTGCAGGGACTTCTTGGAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000424224.5
ENST00000437268.6
ENST00000438716.3
ENST00000445781.5
ENST00000446658.6
CDS CAA 72 bp GGAATGCGGACTCGCCTCTTGACTTTGGATGAACCCTaGGGCACGAGCGAGGCACCATCTAGTACATTGTCT +
Preference number: 6 (lower is better)
Translates to: GMRTRLLTLDEP*GTSEAPSSTLS
Trigger: AGACAATGTACTAGATGGTGCCTCGCTCGTGCCCAAGGGTTCATCCAAAGTCAAGAGGCGAGTCCGCATTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000424224.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000446658.6
ENST00000452656.5
ENST00000453621.5
ENST00000535268.5
CDS CAA 90 bp AGGCACCATCTAGTACATTGTCTGCTGAGCTCCAGTCCACGGAACTaGTCCCGGTGCTACCTTCAGCTTTTCTGCTGTCTTCCTTGGCCT +
Preference number: 6 (lower is better)
Translates to: RHHLVHCLLSSSPRN*SRCYLQLFCCLPWP
Trigger: AGGCCAAGGAAGACAGCAGAAAAGCTGAAGGTAGCACCGGGACAAGTTCCGTGGACTGGAGCTCAGCAGACAATGTACTAGATGGTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000332585.11
ENST00000407373.5
ENST00000424224.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
CDS CCA 72 bp AGCTGTAGGGCAGGAACTTCAGCTGGCACCGGTCATTaGTCTTATGGTTCACAATCTCGATGTCCCCTGACT +
Preference number: 6 (lower is better)
Translates to: SCRAGTSAGTGH*SYGSQSRCPLT
Trigger: AGTCAGGGGACATCGAGATTGTGAACCATAAGACCAATGACCGGTGCCAGCTGAAGTTCCTGCCCTACAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000433183.2
ENST00000437268.6
ENST00000438716.3
ENST00000446658.6
ENST00000452656.5
ENST00000496575.1
ENST00000535268.5
CDS CCA 72 bp TTGAGGTGCTCTTCCTCCACACGTAGTGATTCCCACTaGCCTGGAATTCTAAGTGGATGGCACCTGCTCACA +
Preference number: 6 (lower is better)
Translates to: LRCSSSTRSDSH*PGILSGWHLLT
Trigger: TGTGAGCAGGTGCCATCCACTTAGAATTCCAGGCCAGTGGGAATCACTACGTGTGGAGGAAGAGCACCTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496575.1
CDS CAA 90 bp CCAAGCGTTTTAGTACAAGAAACATCTCAAAGTGGGATTCTGAACTaGGACCTCCCGGGATCCCTGGGTAGGCTGGCAGTCTGTGAGGCT +
Preference number: 6 (lower is better)
Translates to: PSVLVQETSQSGILN*DLPGSLGRLAVCEA
Trigger: AGCCTCACAGACTGCCAGCCTACCCAGGGATCCCGGGAGGTCCAAGTTCAGAATCCCACTTTGAGATGTTTCTTGTACTAAAACGCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407373.5
CDS CAA 90 bp ATTATCTCGGAAAAGCCAAAACTGCTTATTCAAGACAAAGCAGTTTaGGTCTCGGGTAGGGAGGCAGTGCCTGGGAAGCCTCCGGCAGTG +
Preference number: 6 (lower is better)
Translates to: IISEKPKLLIQDKAV*VSGREAVPGKPPAV
Trigger: CACTGCCGGAGGCTTCCCAGGCACTGCCTCCCTACCCGAGACCAAAACTGCTTTGTCTTGAATAAGCAGTTTTGGCTTTTCCGAGATAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496367.1
CDS TCA 72 bp GATCCAGAGCTTGCCCACGATGATGTTGTGAACAGTTaGGGTGCTCTTCCTCCACACGTAGTGATTCCCACT +
Preference number: 6 (lower is better)
Translates to: DPELAHDDVVNS*GALPPHVVIPT
Trigger: AGTGGGAATCACTACGTGTGGAGGAAGAGCACCTCAACTGTTCACAACATCATCGTGGGCAAGCTCTGGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000403222.7
ENST00000407373.5
ENST00000431368.5
ENST00000433183.2
ENST00000437268.6
ENST00000438716.3
ENST00000446658.6
ENST00000452656.5
ENST00000496575.1
ENST00000535268.5
CDS TCA 72 bp TGTAGTTGGGCTTGTTGGGAATGCGGACTCGCCTCTTaGCTTTGGATGAACCATTGTCTGCTGAGCTCCAGT +
Preference number: 6 (lower is better)
Translates to: CSWACWECGLAS*LWMNHCLLSSS
Trigger: ACTGGAGCTCAGCAGACAATGGTTCATCCAAAGTCAAGAGGCGAGTCCGCATTCCCAACAAGCCCAACTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454145.5
CDS CAA 72 bp CTAGTACATTGTCTGCTGAGCTCCAGTCCACGGAACTaGTCCCGGTGCTACCTTCAGCTTTTCTGCTGTCTT +
Preference number: 6 (lower is better)
Translates to: LVHCLLSSSPRN*SRCYLQLFCCL
Trigger: AAGACAGCAGAAAAGCTGAAGGTAGCACCGGGACAAGTTCCGTGGACTGGAGCTCAGCAGACAATGTACTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000332585.11
ENST00000407373.5
ENST00000424224.5
ENST00000431368.5
ENST00000437268.6
ENST00000452656.5
CDS CAA 72 bp TTAGTACAAGAAACATCTCAAAGTGGGATTCTGAACTaGGACCTCCCGGGATCCCTGGGTAGGCTGGCAGTC +
Preference number: 6 (lower is better)
Translates to: LVQETSQSGILN*DLPGSLGRLAV
Trigger: GACTGCCAGCCTACCCAGGGATCCCGGGAGGTCCAAGTTCAGAATCCCACTTTGAGATGTTTCTTGTACTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407373.5
CDS CAA 72 bp CTAGTACATTGTCTGCTGAGCTCCAGTCCACGGAACTaGTCCCGGTGCTACCTTCAGCTTTTCTGTCTTCCT +
Preference number: 6 (lower is better)
Translates to: LVHCLLSSSPRN*SRCYLQLFCLP
Trigger: AGGAAGACAGAAAAGCTGAAGGTAGCACCGGGACAAGTTCCGTGGACTGGAGCTCAGCAGACAATGTACTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000401475.5
ENST00000403222.7
ENST00000438716.3
ENST00000446658.6
ENST00000453621.5
ENST00000535268.5
CDS CAA 72 bp ATGAACCATTGTCTGCTGAGCTCCAGTCCACGGAACTaGTCCCGGTGCTACCTTCAGCTTTTCTGCTGTCTT +
Preference number: 6 (lower is better)
Translates to: MNHCLLSSSPRN*SRCYLQLFCCL
Trigger: AAGACAGCAGAAAAGCTGAAGGTAGCACCGGGACAAGTTCCGTGGACTGGAGCTCAGCAGACAATGGTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454145.5
CDS CCA 72 bp ACCCTGTTAGAGGATTTTCATTTTGGAGCAATAGGGTaGCAGGCTGTCCAGGTATTCTTTAGGGCCAGCCTC +
Preference number: 6 (lower is better)
Translates to: TLLEDFHFGAIG*QAVQVFFRASL
Trigger: GAGGCTGGCCCTAAAGAATACCTGGACAGCCTGCCACCCTATTGCTCCAAAATGAAAATCCTCTAACAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000445781.5
ENST00000477355.5
CDS CAA 72 bp GAAAAGCCAAAACTGCTTATTCAAGACAAAGCAGTTTaGGTCTCGGGTAGGGAGGCAGTGCCTGGGAAGCCT +
Preference number: 6 (lower is better)
Translates to: EKPKLLIQDKAV*VSGREAVPGKP
Trigger: AGGCTTCCCAGGCACTGCCTCCCTACCCGAGACCAAAACTGCTTTGTCTTGAATAAGCAGTTTTGGCTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496367.1
CDS CCA 72 bp CTGCCACCAGTTGACCCTGTTAGAGGATTTTCATTTTaGAGCAATAGGGTGGCAGGCTGTCCAGGTATTCTT +
Preference number: 6 (lower is better)
Translates to: LPPVDPVRGFSF*SNRVAGCPGIL
Trigger: AAGAATACCTGGACAGCCTGCCACCCTATTGCTCCAAAATGAAAATCCTCTAACAGGGTCAACTGGTGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000445781.5
ENST00000464341.1
ENST00000477355.5
CDS CAA 72 bp TACTCGGTATCTTCATCTTCCTCACTGTCCTCTCCTTaGGGAGTCAAGAGGCTTCCCTCAATGAAGCTCTTG +
Preference number: 6 (lower is better)
Translates to: YSVSSSSSLSSP*GVKRLPSMKLL
Trigger: CAAGAGCTTCATTGAGGGAAGCCTCTTGACTCCCAAAGGAGAGGACAGTGAGGAAGATGAAGATACCGAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000332585.11
ENST00000401475.5
ENST00000407373.5
ENST00000424224.5
ENST00000431368.5
ENST00000437268.6
ENST00000438716.3
ENST00000446658.6
ENST00000452656.5
ENST00000453621.5
ENST00000454145.5
ENST00000535268.5
CDS CAA 72 bp TACTCGGTATCTTCATCTTCCTCACTGTCCTCTCCTTaGGGAGTCAAGAGGTCACCCTCAATGAAGCTCTTG +
Preference number: 6 (lower is better)
Translates to: YSVSSSSSLSSP*GVKRSPSMKLL
Trigger: CAAGAGCTTCATTGAGGGTGACCTCTTGACTCCCAAAGGAGAGGACAGTGAGGAAGATGAAGATACCGAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403222.7
CDS CCA 72 bp GAAACTGCAGAAGAAAAATCTGAAGCTAGTAGAGGTTaGTTCATGAGGTTTAAGGAAATAAGCCATCTCCAT +
Preference number: 6 (lower is better)
Translates to: ETAEEKSEASRG*FMRFKEISHLH
Trigger: ATGGAGATGGCTTATTTCCTTAAACCTCATGAACCAACCTCTACTAGCTTCAGATTTTTCTTCTGCAGTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464341.1