RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OS9 (Homo sapiens)

Ensembl gene IDs: ENSG00000135506

Ensembl transcript IDs: ENST00000257966.12, ENST00000315970.12, ENST00000389142.9, ENST00000389146.10, ENST00000413095.6, ENST00000435406.6, ENST00000439210.6, ENST00000546916.1, ENST00000547079.5, ENST00000549307.5, ENST00000549897.1, ENST00000550202.1, ENST00000550372.5, ENST00000550438.5, ENST00000550699.5, ENST00000550793.1, ENST00000550848.5, ENST00000551035.5, ENST00000551285.5, ENST00000552285.5, ENST00000552423.1, ENST00000552787.5, ENST00000553208.5

Found 729 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGCAGGGGCAGCAGCATTCACCCAGGGCCCCCACACCCACAGAGTTaGCCGAGAGGTCCACAGCTCAGCTCCACTCTGCTGTTTGGCCCT +
Preference number: 1 (lower is better)
Translates to: SRGSSIHPGPPHPQS*PRGPQLSSTLLFGP
Trigger: AGGGCCAAACAGCAGAGTGGAGCTGAGCTGTGGACCTCTCGGGCAACTCTGTGGGTGTGGGGGCCCTGGGTGAATGCTGCTGCCCCTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
3UTR GCA 90 bp GGACAAGGGCTCGTCCACGCGATCGATGTAGTCCCCAGAGATACCTaGACCCTCGTCACAGAGGAACCGAACCTCGGCCTCCCGGGGCCT +
Preference number: 1 (lower is better)
Translates to: GQGLVHAIDVVPRDT*TLVTEEPNLGLPGP
Trigger: AGGCCCCGGGAGGCCGAGGTTCGGTTCCTCTGTGACGAGGGTGCAGGTATCTCTGGGGACTACATCGATCGCGTGGACGAGCCCTTGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552787.5
3UTR GCA 90 bp TTCAGGAGAGCAAATATCACAGGCCCGGTGAGGTCTCAAGGTGGCTaGCAGCAGGGGCAGCAGCATTCACCCAGGGCCCCCACACCCACA +
Preference number: 1 (lower is better)
Translates to: FRRANITGPVRSQGG*QQGQQHSPRAPTPT
Trigger: TGTGGGTGTGGGGGCCCTGGGTGAATGCTGCTGCCCCTGCTGGCAGCCACCTTGAGACCTCACCGGGCCTGTGATATTTGCTCTCCTGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
3UTR CCA 90 bp TGTCCACCAGTCCTTTGTCTTCAGCAAGCAGGGAGCATCTCTCATTaGGCTCAACAACTCAGGGATCCCAGGCCCTTGGTAAGCAGGTGT +
Preference number: 1 (lower is better)
Translates to: CPPVLCLQQAGSISH*AQQLRDPRPLVSRC
Trigger: ACACCTGCTTACCAAGGGCCTGGGATCCCTGAGTTGTTGAGCCCAATGAGAGATGCTCCCTGCTTGCTGAAGACAAAGGACTGGTGGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000550848.5
ENST00000551285.5
3UTR CCA 90 bp TCAATAGAAGAGGGTAAAACGACTCCAAACATCACTAAGGGCAGGTaGGGGCCTGCTTGCTCAGTGCCTGCTAAGTGTCCTGCCCTCCTT +
Preference number: 1 (lower is better)
Translates to: SIEEGKTTPNITKGR*GPACSVPAKCPALL
Trigger: AAGGAGGGCAGGACACTTAGCAGGCACTGAGCAAGCAGGCCCCCACCTGCCCTTAGTGATGTTTGGAGTCGTTTTACCCTCTTCTATTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
ENST00000551035.5
3UTR TCA 90 bp CTGGAGGTGATAGGCAGCATTCTACCATTTCCTCAGCAACAGAGGTaGAGGCTCCTCAACTCAGAAGCACAAATTGTAGGGGACAGGGTG +
Preference number: 1 (lower is better)
Translates to: LEVIGSILPFPQQQR*RLLNSEAQIVGDRV
Trigger: CACCCTGTCCCCTACAATTTGTGCTTCTGAGTTGAGGAGCCTTCACCTCTGTTGCTGAGGAAATGGTAGAATGCTGCCTATCACCTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
3UTR TCA 90 bp GGGACAATAACAGGAAAAGCCACAGAGGAGAGGAAGAGGATTGAGTaGGAGTTCAGGAGAGCAAATATCACAGGCCCGGTGAGGTCTCAA +
Preference number: 1 (lower is better)
Translates to: GTITGKATEERKRIE*EFRRANITGPVRSQ
Trigger: TTGAGACCTCACCGGGCCTGTGATATTTGCTCTCCTGAACTCTCACTCAATCCTCTTCCTCTCCTCTGTGGCTTTTCCTGTTATTGTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
3UTR CAA 90 bp CAGCAGGGGCAGCAGCATTCACCCAGGGCCCCCACACCCACAGAGTaGCCCGAGAGGTCCACAGCTCAGCTCCACTCTGCTGTTTGGCCC +
Preference number: 2 (lower is better)
Translates to: QQGQQHSPRAPTPTE*PERSTAQLHSAVWP
Trigger: GGGCCAAACAGCAGAGTGGAGCTGAGCTGTGGACCTCTCGGGCAACTCTGTGGGTGTGGGGGCCCTGGGTGAATGCTGCTGCCCCTGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
3UTR-3UTR CCA 90 bp GGCAGGTGGGGGCCTGCTTGCTCAGTGCCTGCTAAGTGTCCTGCCCTCCTTGCTCTCCACTCTGCTGTTTaGCCCTCAGGGGTTCCAGGG +
Preference number: 2 (lower is better)
Translates to: GRWGPACSVPAKCPALLALHSAV*PSGVPG
Trigger: CCCTGGAACCCCTGAGGGCCAAACAGCAGAGTGGAG...AGCAAGGAGGGCAGGACACTTAGCAGGCACTGAGCAAGCAGGCCCCCACCTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
3UTR-3UTR CCA 90 bp CCCCAGACTTGGTCTCACTCCACACTTGGGGGCCTAGATCTTGCAGCTCCTCTACCTGCGGTGCAGCACTaGGTGGGGGCCGGAGGAGAG +
Preference number: 2 (lower is better)
Translates to: PQTWSHSTLGGLDLAAPLPAVQH*VGAGGE
Trigger: CTCTCCTCCGGCCCCCACCCAGTGCTGCACCGCAGG...TAGAGGAGCTGCAAGATCTAGGCCCCCAAGTGTGGAGTGAGACCAAGTCTGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000552787.5
3UTR-3UTR GCA 90 bp ATCACTAAGGGCAGGTGGGGGCCTGCTTGCTCAGTGCCTGCTAAGTGTCCTGCCCCACACCCACAGAGTTaGCCGAGAGGTCCACAGCTC +
Preference number: 2 (lower is better)
Translates to: ITKGRWGPACSVPAKCPAPHPQS*PRGPQL
Trigger: GAGCTGTGGACCTCTCGGGCAACTCTGTGGGTGTGG...GGCAGGACACTTAGCAGGCACTGAGCAAGCAGGCCCCCACCTGCCCTTAGTGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
3UTR-3UTR CCA 90 bp ATCACTAAGGGCAGGTGGGGGCCTGCTTGCTCAGTGCCTGCTAAGTGTCCTGCCCTCCACTCTGCTGTTTaGCCCTCAGGGGTTCCAGGG +
Preference number: 2 (lower is better)
Translates to: ITKGRWGPACSVPAKCPALHSAV*PSGVPG
Trigger: CCCTGGAACCCCTGAGGGCCAAACAGCAGAGTGGAG...GGCAGGACACTTAGCAGGCACTGAGCAAGCAGGCCCCCACCTGCCCTTAGTGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
3UTR-3UTR TCA 90 bp GGCAGGTGGGGGCCTGCTTGCTCAGTGCCTGCTAAGTGTCCTGCCCTCCTTGCTAGAGTCTGGATTCCGTaGAGGGTCAAGTGTAGTGTT +
Preference number: 2 (lower is better)
Translates to: GRWGPACSVPAKCPALLARVWIP*RVKCSV
Trigger: AACACTACACTTGACCCTTCACGGAATCCAGACTCT...AGCAAGGAGGGCAGGACACTTAGCAGGCACTGAGCAAGCAGGCCCCCACCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
3UTR-3UTR TCA 90 bp ACAGAGGTGAAGGCTCCTCAACTCAGAAGCACAAATTGTAGGGGACAGGGTGGGATATCACAGGCCCGGTaGGGTCTCAAGGTGGCTGCC +
Preference number: 2 (lower is better)
Translates to: TEVKAPQLRSTNCRGQGGISQAR*GLKVAA
Trigger: GGCAGCCACCTTGAGACCTCACCGGGCCTGTGATAT...CCCACCCTGTCCCCTACAATTTGTGCTTCTGAGTTGAGGAGCCTTCACCTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
3UTR-3UTR GCA 90 bp CCCCAGACTTGGTCTCACTCCACACTTGGGGGCCTAGATCTTGCAGCTCCTCTAGTCCCCAGAGATACCTaGACCCTCGTCACAGAGGAA +
Preference number: 2 (lower is better)
Translates to: PQTWSHSTLGGLDLAAPLVPRDT*TLVTEE
Trigger: TTCCTCTGTGACGAGGGTGCAGGTATCTCTGGGGAC...TAGAGGAGCTGCAAGATCTAGGCCCCCAAGTGTGGAGTGAGACCAAGTCTGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000552787.5
3UTR-3UTR CCA 90 bp ACAGAGGTGAAGGCTCCTCAACTCAGAAGCACAAATTGTAGGGGACAGGGTGGGCTCCACTCTGCTGTTTaGCCCTCAGGGGTTCCAGGG +
Preference number: 2 (lower is better)
Translates to: TEVKAPQLRSTNCRGQGGLHSAV*PSGVPG
Trigger: CCCTGGAACCCCTGAGGGCCAAACAGCAGAGTGGAG...CCCACCCTGTCCCCTACAATTTGTGCTTCTGAGTTGAGGAGCCTTCACCTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
3UTR CAA 90 bp GGGAGCATCTCTCATTGGGCTCAACAACTCAGGGATCCCAGGCCCTaGGTAAGCAGGTGTTTCCTCCTCCCTTTCACGCTGGAAGTGAAT +
Preference number: 2 (lower is better)
Translates to: GSISHWAQQLRDPRP*VSRCFLLPFTLEVN
Trigger: ATTCACTTCCAGCGTGAAAGGGAGGAGGAAACACCTGCTTACCAAGGGCCTGGGATCCCTGAGTTGTTGAGCCCAATGAGAGATGCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000550848.5
ENST00000551285.5
3UTR CAA 90 bp ATGTCCACCAGTCCTTTGTCTTCAGCAAGCAGGGAGCATCTCTCATaGGGCTCAACAACTCAGGGATCCCAGGCCCTTGGTAAGCAGGTG +
Preference number: 2 (lower is better)
Translates to: MSTSPLSSASREHLS*GSTTQGSQALGKQV
Trigger: CACCTGCTTACCAAGGGCCTGGGATCCCTGAGTTGTTGAGCCCAATGAGAGATGCTCCCTGCTTGCTGAAGACAAAGGACTGGTGGACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000550848.5
ENST00000551285.5
3UTR-3UTR TCA 90 bp GTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGGAGGATATCACAGGCCCGGTaGGGTCTCAAGGTGGCTGCC +
Preference number: 2 (lower is better)
Translates to: VQEHGGCFTPFSLGLCWRISQAR*GLKVAA
Trigger: GGCAGCCACCTTGAGACCTCACCGGGCCTGTGATAT...CCTCCAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
3UTR-3UTR TCA 90 bp ATCACTAAGGGCAGGTGGGGGCCTGCTTGCTCAGTGCCTGCTAAGTGTCCTGCCAGGAAGAGGATTGAGTaGGAGTTCAGGAGAGCAAAT +
Preference number: 2 (lower is better)
Translates to: ITKGRWGPACSVPAKCPARKRIE*EFRRAN
Trigger: ATTTGCTCTCCTGAACTCTCACTCAATCCTCTTCCT...GGCAGGACACTTAGCAGGCACTGAGCAAGCAGGCCCCCACCTGCCCTTAGTGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
3UTR-3UTR GCA 90 bp TCAATAGAAGAGGGTAAAACGACTCCAAACATCACTAAGGGCAGGTGGGGGCCTCCACACCCACAGAGTTaGCCGAGAGGTCCACAGCTC +
Preference number: 2 (lower is better)
Translates to: SIEEGKTTPNITKGRWGPPHPQS*PRGPQL
Trigger: GAGCTGTGGACCTCTCGGGCAACTCTGTGGGTGTGG...AGGCCCCCACCTGCCCTTAGTGATGTTTGGAGTCGTTTTACCCTCTTCTATTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
ENST00000551035.5
3UTR-3UTR GCA 90 bp GTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGGAGGGGCCTGCTTGCTCAGTaGCTGCTAAGTGTCCTGCCC +
Preference number: 2 (lower is better)
Translates to: VQEHGGCFTPFSLGLCWRGLLAQ*LLSVLP
Trigger: GGGCAGGACACTTAGCAGGCACTGAGCAAGCAGGCC...CCTCCAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
3UTR-3UTR GCA 90 bp GGTGATAGGCAGCATTCTACCATTTCCTCAGCAACAGAGGTGAAGGCTCCTCAAGGCCTGCTTGCTCAGTaGCTGCTAAGTGTCCTGCCC +
Preference number: 2 (lower is better)
Translates to: GDRQHSTISSATEVKAPQGLLAQ*LLSVLP
Trigger: GGGCAGGACACTTAGCAGGCACTGAGCAAGCAGGCC...TTGAGGAGCCTTCACCTCTGTTGCTGAGGAAATGGTAGAATGCTGCCTATCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
3UTR-3UTR GCA 90 bp TGTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGGAGGGCCTGCTTGCTCAGTaGCTGCTAAGTGTCCTGCCC +
Preference number: 2 (lower is better)
Translates to: CSRTWWVLHTFFTGIVLEGLLAQ*LLSVLP
Trigger: GGGCAGGACACTTAGCAGGCACTGAGCAAGCAGGCC...CTCCAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
3UTR-3UTR GCA 90 bp CTGATTGTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCGGCCTGCTTGCTCAGTaGCTGCTAAGTGTCCTGCCC +
Preference number: 2 (lower is better)
Translates to: LIVQEHGGCFTPFSLGLCGLLAQ*LLSVLP
Trigger: GGGCAGGACACTTAGCAGGCACTGAGCAAGCAGGCC...GCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACAATCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
3UTR-3UTR GCA 90 bp AGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGGAGGTGATAAGGTGGGGGCCTGCTTaGTCAGTGCCTGCTAAGTGT +
Preference number: 2 (lower is better)
Translates to: RTWWVLHTFFTGIVLEVIRWGPA*SVPAKC
Trigger: ACACTTAGCAGGCACTGAGCAAGCAGGCCCCCACCT...TATCACCTCCAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
3UTR-3UTR TCA 90 bp ACAGAGGTGAAGGCTCCTCAACTCAGAAGCACAAATTGTAGGGGACAGGGTGGGAGAGTCTGGATTCCGTaGAGGGTCAAGTGTAGTGTT +
Preference number: 2 (lower is better)
Translates to: TEVKAPQLRSTNCRGQGGRVWIP*RVKCSV
Trigger: AACACTACACTTGACCCTTCACGGAATCCAGACTCT...CCCACCCTGTCCCCTACAATTTGTGCTTCTGAGTTGAGGAGCCTTCACCTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
3UTR-3UTR GCA 90 bp TCCCAAGGCAATTCAATAGAAGAGGGTAAAACGACTCCAAACATCACTAAGGGCCCACACCCACAGAGTTaGCCGAGAGGTCCACAGCTC +
Preference number: 2 (lower is better)
Translates to: SQGNSIEEGKTTPNITKGPHPQS*PRGPQL
Trigger: GAGCTGTGGACCTCTCGGGCAACTCTGTGGGTGTGG...GCCCTTAGTGATGTTTGGAGTCGTTTTACCCTCTTCTATTGAATTGCCTTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
ENST00000551035.5
3UTR-3UTR GCA 90 bp GATTGTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGGTGTCCTGCCCTCCTTaGTCTCTCTACCCACCTCCA +
Preference number: 2 (lower is better)
Translates to: DCSRTWWVLHTFFTGIVLVSCPP*SLYPPP
Trigger: TGGAGGTGGGTAGAGAGAGCAAGGAGGGCAGGACAC...CAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
3UTR-3UTR GCA 90 bp GATTGTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGAGGTGGGGGCCTGCTTaGTCAGTGCCTGCTAAGTGT +
Preference number: 2 (lower is better)
Translates to: DCSRTWWVLHTFFTGIVLRWGPA*SVPAKC
Trigger: ACACTTAGCAGGCACTGAGCAAGCAGGCCCCCACCT...CAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
3UTR-3UTR GCA 90 bp TACCATTTCCTCAGCAACAGAGGTGAAGGCTCCTCAACTCAGAAGCACAAATTGAGGTGGGGGCCTGCTTaGTCAGTGCCTGCTAAGTGT +
Preference number: 2 (lower is better)
Translates to: YHFLSNRGEGSSTQKHKLRWGPA*SVPAKC
Trigger: ACACTTAGCAGGCACTGAGCAAGCAGGCCCCCACCT...CAATTTGTGCTTCTGAGTTGAGGAGCCTTCACCTCTGTTGCTGAGGAAATGGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
3UTR-3UTR GCA 90 bp TTGGTCTCACTCCACACTTGGGGGCCTAGATCTTGCAGCTCCTCTATGATTTTACGCACTTGGACCCATTaGCATAGGTCTGGCTGTGGT +
Preference number: 2 (lower is better)
Translates to: LVSLHTWGPRSCSSSMILRTWTH*HRSGCG
Trigger: ACCACAGCCAGACCTATGGCAATGGGTCCAAGTGCG...TAAAATCATAGAGGAGCTGCAAGATCTAGGCCCCCAAGTGTGGAGTGAGACCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552787.5
3UTR-3UTR CCA 90 bp TCCCAAGGCAATTCAATAGAAGAGGGTAAAACGACTCCAAACATCACTAAGGGCCTCCACTCTGCTGTTTaGCCCTCAGGGGTTCCAGGG +
Preference number: 2 (lower is better)
Translates to: SQGNSIEEGKTTPNITKGLHSAV*PSGVPG
Trigger: CCCTGGAACCCCTGAGGGCCAAACAGCAGAGTGGAG...GCCCTTAGTGATGTTTGGAGTCGTTTTACCCTCTTCTATTGAATTGCCTTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
ENST00000551035.5
3UTR-3UTR TCA 90 bp AAGGCTCCTCAACTCAGAAGCACAAATTGTAGGGGACAGGGTGGGCAGGGAAAGAGGAAGAGGATTGAGTaGGAGTTCAGGAGAGCAAAT +
Preference number: 2 (lower is better)
Translates to: KAPQLRSTNCRGQGGQGKRKRIE*EFRRAN
Trigger: ATTTGCTCTCCTGAACTCTCACTCAATCCTCTTCCT...CTTTCCCTGCCCACCCTGTCCCCTACAATTTGTGCTTCTGAGTTGAGGAGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
3UTR-3UTR TCA 90 bp AGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGGAGGTGATAGGAGAGGAAGAGGATTaGGTGAGAGTTCAGGAGAGC +
Preference number: 2 (lower is better)
Translates to: RTWWVLHTFFTGIVLEVIGEEED*VRVQES
Trigger: GCTCTCCTGAACTCTCACTCAATCCTCTTCCTCTCC...TATCACCTCCAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
3UTR-3UTR TCA 90 bp AGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGGAGGTGATACCTCAGCAACAGAGGTaGAGGCTCCTCAACTCAGAA +
Preference number: 2 (lower is better)
Translates to: RTWWVLHTFFTGIVLEVIPQQQR*RLLNSE
Trigger: TTCTGAGTTGAGGAGCCTTCACCTCTGTTGCTGAGG...TATCACCTCCAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
3UTR-3UTR TCA 90 bp GTCCATAACAGAATTCATATGTCCACCAGTCCTTTGTCTTCAGCAAGCAGGGAGCTTTCACGCTGGAAGTaGATAGCTCCAGCTGGCAGG +
Preference number: 2 (lower is better)
Translates to: VHNRIHMSTSPLSSASRELSRWK*IAPAGR
Trigger: CCTGCCAGCTGGAGCTATTCACTTCCAGCGTGAAAG...CTCCCTGCTTGCTGAAGACAAAGGACTGGTGGACATATGAATTCTGTTATGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000550848.5
ENST00000551285.5
3UTR-3UTR TCA 90 bp GACTTGGTCTCACTCCACACTTGGGGGCCTAGATCTTGCAGCTCCTCTATGATTCAGCTATTCAATACTTaGTCTTTTGCCACCCCCTGC +
Preference number: 2 (lower is better)
Translates to: DLVSLHTWGPRSCSSSMIQLFNT*SFATPC
Trigger: GCAGGGGGTGGCAAAAGATCAAGTATTGAATAGCTG...AATCATAGAGGAGCTGCAAGATCTAGGCCCCCAAGTGTGGAGTGAGACCAAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000552787.5
3UTR-3UTR GCA 90 bp TCCCAAGGCAATTCAATAGAAGAGGGTAAAACGACTCCAAACATCACTAAGGGCGTGTCCTGCCCTCCTTaGTCTCTCTACCCACCTCCA +
Preference number: 2 (lower is better)
Translates to: SQGNSIEEGKTTPNITKGVSCPP*SLYPPP
Trigger: TGGAGGTGGGTAGAGAGAGCAAGGAGGGCAGGACAC...GCCCTTAGTGATGTTTGGAGTCGTTTTACCCTCTTCTATTGAATTGCCTTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
ENST00000551035.5
3UTR-3UTR TCA 90 bp GATTGTGCTGGAGGTGATAGGCAGCATTCTACCATTTCCTCAGCAACAGAGGTGAGAGTCTGGATTCCGTaGAGGGTCAAGTGTAGTGTT +
Preference number: 2 (lower is better)
Translates to: DCAGGDRQHSTISSATEVRVWIP*RVKCSV
Trigger: AACACTACACTTGACCCTTCACGGAATCCAGACTCT...CACCTCTGTTGCTGAGGAAATGGTAGAATGCTGCCTATCACCTCCAGCACAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
3UTR-3UTR TCA 90 bp CTGATTGTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCGGAGAGGAAGAGGATTaGGTGAGAGTTCAGGAGAGC +
Preference number: 2 (lower is better)
Translates to: LIVQEHGGCFTPFSLGLCGEEED*VRVQES
Trigger: GCTCTCCTGAACTCTCACTCAATCCTCTTCCTCTCC...GCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACAATCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
3UTR-3UTR TCA 90 bp TTGTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGGAGGAGAGGAAGAGGATTaGGTGAGAGTTCAGGAGAGC +
Preference number: 2 (lower is better)
Translates to: LFKNMVGASHLFHWDCAGGEEED*VRVQES
Trigger: GCTCTCCTGAACTCTCACTCAATCCTCTTCCTCTCC...TCCAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
3UTR-3UTR TCA 90 bp GATTGTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGCCTCAGCAACAGAGGTaGAGGCTCCTCAACTCAGAA +
Preference number: 2 (lower is better)
Translates to: DCSRTWWVLHTFFTGIVLPQQQR*RLLNSE
Trigger: TTCTGAGTTGAGGAGCCTTCACCTCTGTTGCTGAGG...CAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
3UTR-3UTR CCA 90 bp CATAACAGAATTCATATGTCCACCAGTCCTTTGTCTTCAGCAAGCAGGGAGCATGTGAATAGCTCCAGCTaGCAGGCGACACTCATAGCG +
Preference number: 2 (lower is better)
Translates to: HNRIHMSTSPLSSASREHVNSSS*QATLIA
Trigger: CGCTATGAGTGTCGCCTGCCAGCTGGAGCTATTCAC...ATGCTCCCTGCTTGCTGAAGACAAAGGACTGGTGGACATATGAATTCTGTTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000550848.5
ENST00000551285.5
3UTR-3UTR TCA 90 bp GTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGGAGGAGGAAGAGGATTGAGTaGGAGTTCAGGAGAGCAAAT +
Preference number: 2 (lower is better)
Translates to: VQEHGGCFTPFSLGLCWRRKRIE*EFRRAN
Trigger: ATTTGCTCTCCTGAACTCTCACTCAATCCTCTTCCT...CCTCCAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
3UTR-3UTR TCA 90 bp TCCCAAGGCAATTCAATAGAAGAGGGTAAAACGACTCCAAACATCACTAAGGGCGGAGAGGAAGAGGATTaGGTGAGAGTTCAGGAGAGC +
Preference number: 2 (lower is better)
Translates to: SQGNSIEEGKTTPNITKGGEEED*VRVQES
Trigger: GCTCTCCTGAACTCTCACTCAATCCTCTTCCTCTCC...GCCCTTAGTGATGTTTGGAGTCGTTTTACCCTCTTCTATTGAATTGCCTTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
ENST00000551035.5
3UTR-3UTR CCA 90 bp ACTTCACCTTTGATCTCTGAATCTTCCATGTGGTATTGCTGGATGTGGCGTCCAGGGAGCATCTCTCATTaGGCTCAACAACTCAGGGAT +
Preference number: 2 (lower is better)
Translates to: TSPLISESSMWYCWMWRPGSISH*AQQLRD
Trigger: ATCCCTGAGTTGTTGAGCCCAATGAGAGATGCTCCC...TGGACGCCACATCCAGCAATACCACATGGAAGATTCAGAGATCAAAGGTGAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000550848.5
ENST00000551285.5
3UTR-3UTR GCA 90 bp TCTCTGAATCTTCCATGTGGTATTGCTGGATGTGGCGTCCATAACAGAATTCATGTAAGGAGGGAGGGCTaGTTTCCTTCTGTGACTTGG +
Preference number: 2 (lower is better)
Translates to: SLNLPCGIAGCGVHNRIHVRREG*FPSVTW
Trigger: CCAAGTCACAGAAGGAAAGCAGCCCTCCCTCCTTAC...ATGAATTCTGTTATGGACGCCACATCCAGCAATACCACATGGAAGATTCAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552423.1
3UTR-3UTR TCA 90 bp TCCCAAGGCAATTCAATAGAAGAGGGTAAAACGACTCCAAACATCACTAAGGGCAGGAAGAGGATTGAGTaGGAGTTCAGGAGAGCAAAT +
Preference number: 2 (lower is better)
Translates to: SQGNSIEEGKTTPNITKGRKRIE*EFRRAN
Trigger: ATTTGCTCTCCTGAACTCTCACTCAATCCTCTTCCT...GCCCTTAGTGATGTTTGGAGTCGTTTTACCCTCTTCTATTGAATTGCCTTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
ENST00000551035.5
3UTR-3UTR TCA 90 bp ACTTCACCTTTGATCTCTGAATCTTCCATGTGGTATTGCTGGATGTGGCGTCCAAGAGGACTTCACCTTTaGTCTCTGAATCTTCCATGT +
Preference number: 2 (lower is better)
Translates to: TSPLISESSMWYCWMWRPRGLHL*SLNLPC
Trigger: ACATGGAAGATTCAGAGATCAAAGGTGAAGTCCTCT...TGGACGCCACATCCAGCAATACCACATGGAAGATTCAGAGATCAAAGGTGAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000550848.5
ENST00000551285.5
ENST00000552423.1
3UTR-3UTR TCA 90 bp ACTTCACCTTTGATCTCTGAATCTTCCATGTGGTATTGCTGGATGTGGCGTCCATTCACCTTTGATCTCTaGATCTTCCATGTGGTATTG +
Preference number: 2 (lower is better)
Translates to: TSPLISESSMWYCWMWRPFTFDL*IFHVVL
Trigger: CAATACCACATGGAAGATTCAGAGATCAAAGGTGAA...TGGACGCCACATCCAGCAATACCACATGGAAGATTCAGAGATCAAAGGTGAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000550848.5
ENST00000551285.5
ENST00000552423.1
3UTR GCA 72 bp CTCGTCCACGCGATCGATGTAGTCCCCAGAGATACCTaGACCCTCGTCACAGAGGAACCGAACCTCGGCCTC +
Preference number: 3 (lower is better)
Translates to: LVHAIDVVPRDT*TLVTEEPNLGL
Trigger: GAGGCCGAGGTTCGGTTCCTCTGTGACGAGGGTGCAGGTATCTCTGGGGACTACATCGATCGCGTGGACGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552787.5
3UTR GCA 72 bp ACATCACTAAGGGCAGGTGGGGGCCTGCTTGCTCAGTaGCTGCTAAGTGTCCTGCCCTCCTTGCTCTCTCTA +
Preference number: 3 (lower is better)
Translates to: TSLRAGGGLLAQ*LLSVLPSLLSL
Trigger: TAGAGAGAGCAAGGAGGGCAGGACACTTAGCAGGCACTGAGCAAGCAGGCCCCCACCTGCCCTTAGTGATGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
3UTR-3UTR CAA 90 bp ACAGAGGTGAAGGCTCCTCAACTCAGAAGCACAAATTGTAGGGGACAGGGTGGGAGTGTCCTGCCCTCCTaGCTCTCTCTACCCACCTCC +
Preference number: 3 (lower is better)
Translates to: TEVKAPQLRSTNCRGQGGSVLPS*LSLPTS
Trigger: GGAGGTGGGTAGAGAGAGCAAGGAGGGCAGGACACT...CCCACCCTGTCCCCTACAATTTGTGCTTCTGAGTTGAGGAGCCTTCACCTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
3UTR CCA 72 bp GAGGGTAAAACGACTCCAAACATCACTAAGGGCAGGTaGGGGCCTGCTTGCTCAGTGCCTGCTAAGTGTCCT +
Preference number: 3 (lower is better)
Translates to: EGKTTPNITKGR*GPACSVPAKCP
Trigger: AGGACACTTAGCAGGCACTGAGCAAGCAGGCCCCCACCTGCCCTTAGTGATGTTTGGAGTCGTTTTACCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
ENST00000551035.5
3UTR-3UTR CAA 90 bp GTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGGAGGAGTGTCCTGCCCTCCTaGCTCTCTCTACCCACCTCC +
Preference number: 3 (lower is better)
Translates to: VQEHGGCFTPFSLGLCWRSVLPS*LSLPTS
Trigger: GGAGGTGGGTAGAGAGAGCAAGGAGGGCAGGACACT...CCTCCAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
3UTR CCA 72 bp GTCCTTTGTCTTCAGCAAGCAGGGAGCATCTCTCATTaGGCTCAACAACTCAGGGATCCCAGGCCCTTGGTA +
Preference number: 3 (lower is better)
Translates to: VLCLQQAGSISH*AQQLRDPRPLV
Trigger: TACCAAGGGCCTGGGATCCCTGAGTTGTTGAGCCCAATGAGAGATGCTCCCTGCTTGCTGAAGACAAAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000550848.5
ENST00000551285.5
3UTR-3UTR CAA 90 bp TGTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGGAGAGTGTCCTGCCCTCCTaGCTCTCTCTACCCACCTCC +
Preference number: 3 (lower is better)
Translates to: CSRTWWVLHTFFTGIVLESVLPS*LSLPTS
Trigger: GGAGGTGGGTAGAGAGAGCAAGGAGGGCAGGACACT...CTCCAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
3UTR-3UTR CAA 90 bp AGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGGAGGTGATAAGTGTCCTGCCCTCCTaGCTCTCTCTACCCACCTCC +
Preference number: 3 (lower is better)
Translates to: RTWWVLHTFFTGIVLEVISVLPS*LSLPTS
Trigger: GGAGGTGGGTAGAGAGAGCAAGGAGGGCAGGACACT...TATCACCTCCAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
3UTR-3UTR CAA 90 bp ACTTCACCTTTGATCTCTGAATCTTCCATGTGGTATTGCTGGATGTGGCGTCCAAGGGATCCCAGGCCCTaGGTAAGCAGGTGTTTCCTC +
Preference number: 3 (lower is better)
Translates to: TSPLISESSMWYCWMWRPRDPRP*VSRCFL
Trigger: GAGGAAACACCTGCTTACCAAGGGCCTGGGATCCCT...TGGACGCCACATCCAGCAATACCACATGGAAGATTCAGAGATCAAAGGTGAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000550848.5
ENST00000551285.5
3UTR TCA 72 bp TGCCACCTTGGCTGTTTCATCATCCCAGTCGAAGGCTaGTTGGTAGTAGCCGAGATAGAGGACTTCACCTTT +
Preference number: 3 (lower is better)
Translates to: CHLGCFIIPVEG*LVVAEIEDFTF
Trigger: AAAGGTGAAGTCCTCTATCTCGGCTACTACCAATCAGCCTTCGACTGGGATGATGAAACAGCCAAGGTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551285.5
3UTR-3UTR CAA 90 bp ACTTCACCTTTGATCTCTGAATCTTCCATGTGGTATTGCTGGATGTGGCGTCCAAGGGAGCATCTCTCATaGGGCTCAACAACTCAGGGA +
Preference number: 3 (lower is better)
Translates to: TSPLISESSMWYCWMWRPREHLS*GSTTQG
Trigger: TCCCTGAGTTGTTGAGCCCAATGAGAGATGCTCCCT...TGGACGCCACATCCAGCAATACCACATGGAAGATTCAGAGATCAAAGGTGAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000550848.5
ENST00000551285.5
3UTR-3UTR CAA 90 bp ACTTCACCTTTGATCTCTGAATCTTCCATGTGGTATTGCTGGATGTGGCGTCCAATGTCCACCAGTCCTTaGTCTTCAGCAAGCAGGGAG +
Preference number: 3 (lower is better)
Translates to: TSPLISESSMWYCWMWRPMSTSP*SSASRE
Trigger: CTCCCTGCTTGCTGAAGACAAAGGACTGGTGGACAT...TGGACGCCACATCCAGCAATACCACATGGAAGATTCAGAGATCAAAGGTGAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000550848.5
ENST00000551285.5
3UTR GCA 72 bp GACTTGGTCTCACTCCACACTTGGGGGCCTAGATCTTaGAGCTCCTCTATGATTTTATCTCCATACTGCTTT +
Preference number: 3 (lower is better)
Translates to: DLVSLHTWGPRS*SSSMILSPYCF
Trigger: AAAGCAGTATGGAGATAAAATCATAGAGGAGCTGCAAGATCTAGGCCCCCAAGTGTGGAGTGAGACCAAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552787.5
3UTR TCA 72 bp CTGATTGGTAGTAGCCGAGATAGAGGACTTCACCTTTaGTCTCTGAATCTTCCATGTGGTATTGCTGGATGT +
Preference number: 3 (lower is better)
Translates to: LIGSSRDRGLHL*SLNLPCGIAGC
Trigger: ACATCCAGCAATACCACATGGAAGATTCAGAGATCAAAGGTGAAGTCCTCTATCTCGGCTACTACCAATCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000550848.5
ENST00000551285.5
ENST00000552423.1
3UTR GCA 72 bp TTATTTAGAAACCTGATTGTTCAAGAACATGGTGGGTaGTTCACACCTTTTTCACTGGGATTGTGCTGGAGG +
Preference number: 3 (lower is better)
Translates to: LFRNLIVQEHGG*FTPFSLGLCWR
Trigger: CCTCCAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACAATCAGGTTTCTAAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR GCA 90 bp GGCAGGTGGGGGCCTGCTTGCTCAGTGCCTGCTAAGTGTCCTGCCCTCCTTGCTCGTCCAGGTCCCCTGTaGCCTCCCCACCTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: GRWGPACSVPAKCPALLARPGPL*PPHLES
Trigger: GCTCTCCAGGTGGGGAGGGCACAGGGGACCTGGACG...AGCAAGGAGGGCAGGACACTTAGCAGGCACTGAGCAAGCAGGCCCCCACCTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
CDS-3UTR GCA 90 bp GGAGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTGAGGATGGCCTGCGGTaGAGCACTGGGTGGGGGCCG +
Preference number: 4 (lower is better)
Translates to: GGGEEASQSRKSLDSVKGEDGLR*STGWGP
Trigger: CGGCCCCCACCCAGTGCTGCACCGCAGGCCATCCTC...ACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR CCA 90 bp GGAGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCCTGCGGTGCAGCACTaGGTGGGGGCCGGAGGAGAG +
Preference number: 4 (lower is better)
Translates to: GGGEEASQSRKSLDSVKGPAVQH*VGAGGE
Trigger: CTCTCCTCCGGCCCCCACCCAGTGCTGCACCGCAGG...ACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR CCA 90 bp ATCACTAAGGGCAGGTGGGGGCCTGCTTGCTCAGTGCCTGCTAAGTGTCCTGCCCCTGCGGTGCAGCACTaGGTGGGGGCCGGAGGAGAG +
Preference number: 4 (lower is better)
Translates to: ITKGRWGPACSVPAKCPAPAVQH*VGAGGE
Trigger: CTCTCCTCCGGCCCCCACCCAGTGCTGCACCGCAGG...GGCAGGACACTTAGCAGGCACTGAGCAAGCAGGCCCCCACCTGCCCTTAGTGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
ENST00000551035.5
CDS-3UTR CCA 90 bp GGGGCAGAGCCGAGGAGTGCGAATGGTCAGCACATAAGAGCAGGACAAGGGCTCCCTGCGGTGCAGCACTaGGTGGGGGCCGGAGGAGAG +
Preference number: 4 (lower is better)
Translates to: GAEPRSANGQHIRAGQGLPAVQH*VGAGGE
Trigger: CTCTCCTCCGGCCCCCACCCAGTGCTGCACCGCAGG...GAGCCCTTGTCCTGCTCTTATGTGCTGACCATTCGCACTCCTCGGCTCTGCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552787.5
CDS-3UTR CCA 90 bp GGAGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTTGTGCCCTCCCCACCTaGAGAGCCCCACACCCGGCG +
Preference number: 4 (lower is better)
Translates to: GGGEEASQSRKSLDSVKGCALPT*RAPHPA
Trigger: CGCCGGGTGTGGGGCTCTCCAGGTGGGGAGGGCACA...ACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR CCA 90 bp ATCACTAAGGGCAGGTGGGGGCCTGCTTGCTCAGTGCCTGCTAAGTGTCCTGCCTGTGCCCTCCCCACCTaGAGAGCCCCACACCCGGCG +
Preference number: 4 (lower is better)
Translates to: ITKGRWGPACSVPAKCPACALPT*RAPHPA
Trigger: CGCCGGGTGTGGGGCTCTCCAGGTGGGGAGGGCACA...GGCAGGACACTTAGCAGGCACTGAGCAAGCAGGCCCCCACCTGCCCTTAGTGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
CDS-3UTR GCA 90 bp AGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCAGAGGATGGCCTGCGGTaGAGCACTGGGTGGGGGCCG +
Preference number: 4 (lower is better)
Translates to: RWGGGKPVQEESGFREGSEDGLR*STGWGP
Trigger: CGGCCCCCACCCAGTGCTGCACCGCAGGCCATCCTC...TGACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR GCA 90 bp GGAGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCGTCCAGGTCCCCTGTaGCCTCCCCACCTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: GGGEEASQSRKSLDSVKGRPGPL*PPHLES
Trigger: GCTCTCCAGGTGGGGAGGGCACAGGGGACCTGGACG...ACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR GCA 90 bp ATCACTAAGGGCAGGTGGGGGCCTGCTTGCTCAGTGCCTGCTAAGTGTCCTGCCCGTCCAGGTCCCCTGTaGCCTCCCCACCTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: ITKGRWGPACSVPAKCPARPGPL*PPHLES
Trigger: GCTCTCCAGGTGGGGAGGGCACAGGGGACCTGGACG...GGCAGGACACTTAGCAGGCACTGAGCAAGCAGGCCCCCACCTGCCCTTAGTGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
CDS-3UTR CCA 90 bp AGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCACCTGCGGTGCAGCACTaGGTGGGGGCCGGAGGAGAG +
Preference number: 4 (lower is better)
Translates to: RWGGGKPVQEESGFREGSPAVQH*VGAGGE
Trigger: CTCTCCTCCGGCCCCCACCCAGTGCTGCACCGCAGG...TGACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR CCA 90 bp CAGAGATACCTGCACCCTCGTCACAGAGGAACCGAACCTCGGCCTCCCGGGGCCAAGGGTGACAGAGGATaGCCTGCGGTGCAGCACTGG +
Preference number: 4 (lower is better)
Translates to: QRYLHPRHRGTEPRPPGAKGDRG*PAVQHW
Trigger: CCAGTGCTGCACCGCAGGCCATCCTCTGTCACCCTT...GGCCCCGGGAGGCCGAGGTTCGGTTCCTCTGTGACGAGGGTGCAGGTATCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552787.5
CDS-3UTR TCA 90 bp GGCAGGTGGGGGCCTGCTTGCTCAGTGCCTGCTAAGTGTCCTGCCCTCCTTGCTATATCACAGGCCCGGTaGGGTCTCAAGGTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: GRWGPACSVPAKCPALLAISQAR*GLKVAA
Trigger: GGCAGCCACCTTGAGACCTCACCGGGCCTGTGATAT...AGCAAGGAGGGCAGGACACTTAGCAGGCACTGAGCAAGCAGGCCCCCACCTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
CDS-3UTR TCA 90 bp GGAGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCGAGACGGAGCTTGGTaGCCCGGACCCGGACTCTGT +
Preference number: 4 (lower is better)
Translates to: GGGEEASQSRKSLDSVKGRDGAW*PGPGLC
Trigger: ACAGAGTCCGGGTCCGGGTCACCAAGCTCCGTCTCG...ACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315970.12
ENST00000389146.10
CDS-3UTR GCA 90 bp GTTCAGGAGAGCAAATATCACAGGCCCGGTGAGGTCTCAAGGTGGCTGCCAGCAGAGGATGGCCTGCGGTaGAGCACTGGGTGGGGGCCG +
Preference number: 4 (lower is better)
Translates to: VQESKYHRPGEVSRWLPAEDGLR*STGWGP
Trigger: CGGCCCCCACCCAGTGCTGCACCGCAGGCCATCCTC...TGCTGGCAGCCACCTTGAGACCTCACCGGGCCTGTGATATTTGCTCTCCTGAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
CDS-3UTR GCA 90 bp CCTCCCATTAAGGTCGCACTTGGACCCATTGCCATAGGTCTGGCTGTGGTAGCGGAGGATGGCCTGCGGTaGAGCACTGGGTGGGGGCCG +
Preference number: 4 (lower is better)
Translates to: PPIKVALGPIAIGLAVVAEDGLR*STGWGP
Trigger: CGGCCCCCACCCAGTGCTGCACCGCAGGCCATCCTC...CGCTACCACAGCCAGACCTATGGCAATGGGTCCAAGTGCGACCTTAATGGGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552787.5
CDS-3UTR GCA 90 bp GGCAGGTGGGGGCCTGCTTGCTCAGTGCCTGCTAAGTGTCCTGCCCTCCTTGCTCCAGTTCCCGCTCCATaGCAGCCTTCACCTCCGAAC +
Preference number: 4 (lower is better)
Translates to: GRWGPACSVPAKCPALLAPVPAP*QPSPPN
Trigger: GTTCGGAGGTGAAGGCTGGCATGGAGCGGGAACTGG...AGCAAGGAGGGCAGGACACTTAGCAGGCACTGAGCAAGCAGGCCCCCACCTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
CDS-3UTR CCA 90 bp ATCACTAAGGGCAGGTGGGGGCCTGCTTGCTCAGTGCCTGCTAAGTGTCCTGCCCGCTGGCGTTCCTTCTaGGCCTCTTCAGCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: ITKGRWGPACSVPAKCPARWRSF*ASSAPG
Trigger: GCCGGGAGCTGAAGAGGCCCAGAAGGAACGCCAGCG...GGCAGGACACTTAGCAGGCACTGAGCAAGCAGGCCCCCACCTGCCCTTAGTGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
CDS-3UTR CCA 90 bp GGAGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCGCTGGCGTTCCTTCTaGGCCTCTTCAGCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: GGGEEASQSRKSLDSVKGRWRSF*ASSAPG
Trigger: GCCGGGAGCTGAAGAGGCCCAGAAGGAACGCCAGCG...ACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR CCA 90 bp GTTCAGGAGAGCAAATATCACAGGCCCGGTGAGGTCTCAAGGTGGCTGCCAGCATGTGCCCTCCCCACCTaGAGAGCCCCACACCCGGCG +
Preference number: 4 (lower is better)
Translates to: VQESKYHRPGEVSRWLPACALPT*RAPHPA
Trigger: CGCCGGGTGTGGGGCTCTCCAGGTGGGGAGGGCACA...TGCTGGCAGCCACCTTGAGACCTCACCGGGCCTGTGATATTTGCTCTCCTGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
CDS-3UTR TCA 90 bp GGAGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTGGCTCTGCCCTCCCATaGCAGGCAACGGCAGGATCT +
Preference number: 4 (lower is better)
Translates to: GGGEEASQSRKSLDSVKGGSALP*QATAGS
Trigger: AGATCCTGCCGTTGCCTGTCATGGGAGGGCAGAGCC...ACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR GCA 90 bp ATCACTAAGGGCAGGTGGGGGCCTGCTTGCTCAGTGCCTGCTAAGTGTCCTGCCGGTCGGGCTCGCACCTaGCATCTTTTGGGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: ITKGRWGPACSVPAKCPAGRART*HLLGCH
Trigger: GTGGCACCCCAAAAGATGGCAGGTGCGAGCCCGACC...GGCAGGACACTTAGCAGGCACTGAGCAAGCAGGCCCCCACCTGCCCTTAGTGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
ENST00000551035.5
CDS-3UTR GCA 90 bp GGAGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTGGTCGGGCTCGCACCTaGCATCTTTTGGGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: GGGEEASQSRKSLDSVKGGRART*HLLGCH
Trigger: GTGGCACCCCAAAAGATGGCAGGTGCGAGCCCGACC...ACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR GCA 90 bp GGCAGGTGGGGGCCTGCTTGCTCAGTGCCTGCTAAGTGTCCTGCCCTCCTTGCTCTCTCCAGCTCTTTCTaGCGCTGGCGTTCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: GRWGPACSVPAKCPALLALSSSF*RWRSFW
Trigger: CCAGAAGGAACGCCAGCGGCAGAAAGAGCTGGAGAG...AGCAAGGAGGGCAGGACACTTAGCAGGCACTGAGCAAGCAGGCCCCCACCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
CDS-3UTR GCA 90 bp GTTCAGGAGAGCAAATATCACAGGCCCGGTGAGGTCTCAAGGTGGCTGCCAGCACGTCCAGGTCCCCTGTaGCCTCCCCACCTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: VQESKYHRPGEVSRWLPARPGPL*PPHLES
Trigger: GCTCTCCAGGTGGGGAGGGCACAGGGGACCTGGACG...TGCTGGCAGCCACCTTGAGACCTCACCGGGCCTGTGATATTTGCTCTCCTGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
CDS-3UTR CCA 90 bp AGAGATACCTGCACCCTCGTCACAGAGGAACCGAACCTCGGCCTCCCGGGGCCTGTGCCACCCCAGACTTaGTCTCACTCCACACTTGGG +
Preference number: 4 (lower is better)
Translates to: RDTCTLVTEEPNLGLPGPVPPQT*SHSTLG
Trigger: CCCAAGTGTGGAGTGAGACCAAGTCTGGGGTGGCAC...AGGCCCCGGGAGGCCGAGGTTCGGTTCCTCTGTGACGAGGGTGCAGGTATCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552787.5
CDS-3UTR CCA 90 bp AGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCACGCTGGCGTTCCTTCTaGGCCTCTTCAGCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: RWGGGKPVQEESGFREGSRWRSF*ASSAPG
Trigger: GCCGGGAGCTGAAGAGGCCCAGAAGGAACGCCAGCG...TGACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR CCA 90 bp GGCAGGTGGGGGCCTGCTTGCTCAGTGCCTGCTAAGTGTCCTGCCCTCCTTGCTATCACTAAGGGCAGGTaGGGGCCTGCTTGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: GRWGPACSVPAKCPALLAITKGR*GPACSV
Trigger: CACTGAGCAAGCAGGCCCCCACCTGCCCTTAGTGAT...AGCAAGGAGGGCAGGACACTTAGCAGGCACTGAGCAAGCAGGCCCCCACCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
CDS-3UTR TCA 90 bp GGCAGGTGGGGGCCTGCTTGCTCAGTGCCTGCTAAGTGTCCTGCCCTCCTTGCTCTTTCACGCTGGAAGTaGATAGCTCCAGCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: GRWGPACSVPAKCPALLALSRWK*IAPAGR
Trigger: CCTGCCAGCTGGAGCTATTCACTTCCAGCGTGAAAG...AGCAAGGAGGGCAGGACACTTAGCAGGCACTGAGCAAGCAGGCCCCCACCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
CDS-3UTR TCA 90 bp AGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCAGAGCCGGTCTCGGTCTaGCGGAAGCAGGATCCCTTC +
Preference number: 4 (lower is better)
Translates to: RWGGGKPVQEESGFREGSEPVSV*RKQDPF
Trigger: GAAGGGATCCTGCTTCCGTCAGACCGAGACCGGCTC...TGACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR TCA 90 bp GGAGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTTGCCCGATCCCGCTCTaGCTCCTTCTTCAGCCCATC +
Preference number: 4 (lower is better)
Translates to: GGGEEASQSRKSLDSVKGCPIPL*LLLQPI
Trigger: GATGGGCTGAAGAAGGAGTCAGAGCGGGATCGGGCA...ACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR TCA 90 bp ATCACTAAGGGCAGGTGGGGGCCTGCTTGCTCAGTGCCTGCTAAGTGTCCTGCCTGCCCGATCCCGCTCTaGCTCCTTCTTCAGCCCATC +
Preference number: 4 (lower is better)
Translates to: ITKGRWGPACSVPAKCPACPIPL*LLLQPI
Trigger: GATGGGCTGAAGAAGGAGTCAGAGCGGGATCGGGCA...GGCAGGACACTTAGCAGGCACTGAGCAAGCAGGCCCCCACCTGCCCTTAGTGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
CDS-3UTR GCA 90 bp GGCAGGTGGGGGCCTGCTTGCTCAGTGCCTGCTAAGTGTCCTGCCCTCCTTGCTGTCCCCAGAGATACCTaGACCCTCGTCACAGAGGAA +
Preference number: 4 (lower is better)
Translates to: GRWGPACSVPAKCPALLAVPRDT*TLVTEE
Trigger: TTCCTCTGTGACGAGGGTGCAGGTATCTCTGGGGAC...AGCAAGGAGGGCAGGACACTTAGCAGGCACTGAGCAAGCAGGCCCCCACCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
ENST00000551035.5
CDS-3UTR GCA 90 bp GGCAGGTGGGGGCCTGCTTGCTCAGTGCCTGCTAAGTGTCCTGCCCTCCTTGCTGGCAGAGCCGAGGAGTaGGAATGGTCAGCACATAAG +
Preference number: 4 (lower is better)
Translates to: GRWGPACSVPAKCPALLAGRAEE*EWSAHK
Trigger: CTTATGTGCTGACCATTCGCACTCCTCGGCTCTGCC...AGCAAGGAGGGCAGGACACTTAGCAGGCACTGAGCAAGCAGGCCCCCACCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
ENST00000551035.5
CDS-3UTR GCA 90 bp AGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCAGGTCGGGCTCGCACCTaGCATCTTTTGGGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: RWGGGKPVQEESGFREGSGRART*HLLGCH
Trigger: GTGGCACCCCAAAAGATGGCAGGTGCGAGCCCGACC...TGACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR GCA 90 bp GGAGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCCAGTTCCCGCTCCATaGCAGCCTTCACCTCCGAAC +
Preference number: 4 (lower is better)
Translates to: GGGEEASQSRKSLDSVKGPVPAP*QPSPPN
Trigger: GTTCGGAGGTGAAGGCTGGCATGGAGCGGGAACTGG...ACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR GCA 90 bp GGAGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCCACACCCACAGAGTTaGCCGAGAGGTCCACAGCTC +
Preference number: 4 (lower is better)
Translates to: GGGEEASQSRKSLDSVKGPHPQS*PRGPQL
Trigger: GAGCTGTGGACCTCTCGGGCAACTCTGTGGGTGTGG...ACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
CDS-3UTR GCA 90 bp GGAGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTGGCCTGCTTGCTCAGTaGCTGCTAAGTGTCCTGCCC +
Preference number: 4 (lower is better)
Translates to: GGGEEASQSRKSLDSVKGGLLAQ*LLSVLP
Trigger: GGGCAGGACACTTAGCAGGCACTGAGCAAGCAGGCC...ACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
CDS-3UTR GCA 90 bp ATCACTAAGGGCAGGTGGGGGCCTGCTTGCTCAGTGCCTGCTAAGTGTCCTGCCGGCCTGCTTGCTCAGTaGCTGCTAAGTGTCCTGCCC +
Preference number: 4 (lower is better)
Translates to: ITKGRWGPACSVPAKCPAGLLAQ*LLSVLP
Trigger: GGGCAGGACACTTAGCAGGCACTGAGCAAGCAGGCC...GGCAGGACACTTAGCAGGCACTGAGCAAGCAGGCCCCCACCTGCCCTTAGTGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
CDS-3UTR CCA 90 bp GGCAGGTGGGGGCCTGCTTGCTCAGTGCCTGCTAAGTGTCCTGCCCTCCTTGCTGCAGTCCTAACAAACTaGACAGCAGCGTTTCCGCCG +
Preference number: 4 (lower is better)
Translates to: GRWGPACSVPAKCPALLAAVLTN*TAAFPP
Trigger: CGGCGGAAACGCTGCTGTCCAGTTTGTTAGGACTGC...AGCAAGGAGGGCAGGACACTTAGCAGGCACTGAGCAAGCAGGCCCCCACCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
CDS-3UTR CCA 90 bp GTCCCCAGAGATACCTGCACCCTCGTCACAGAGGAACCGAACCTCGGCCTCCCGACCACGTCCGAAGATTaGCTCTGCCCTCCCATGACA +
Preference number: 4 (lower is better)
Translates to: VPRDTCTLVTEEPNLGLPTTSED*LCPPMT
Trigger: TGTCATGGGAGGGCAGAGCCAATCTTCGGACGTGGT...CGGGAGGCCGAGGTTCGGTTCCTCTGTGACGAGGGTGCAGGTATCTCTGGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552787.5
CDS-3UTR CCA 90 bp AAGGCTCCTCAACTCAGAAGCACAAATTGTAGGGGACAGGGTGGGCAGGGAAAGCCTGCGGTGCAGCACTaGGTGGGGGCCGGAGGAGAG +
Preference number: 4 (lower is better)
Translates to: KAPQLRSTNCRGQGGQGKPAVQH*VGAGGE
Trigger: CTCTCCTCCGGCCCCCACCCAGTGCTGCACCGCAGG...CTTTCCCTGCCCACCCTGTCCCCTACAATTTGTGCTTCTGAGTTGAGGAGCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CCA 90 bp GGAGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTAAGGGTGACAGAGGATaGCCTGCGGTGCAGCACTGG +
Preference number: 4 (lower is better)
Translates to: GGGEEASQSRKSLDSVKGKGDRG*PAVQHW
Trigger: CCAGTGCTGCACCGCAGGCCATCCTCTGTCACCCTT...ACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR CCA 90 bp GTTCAGGAGAGCAAATATCACAGGCCCGGTGAGGTCTCAAGGTGGCTGCCAGCACGCTGGCGTTCCTTCTaGGCCTCTTCAGCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: VQESKYHRPGEVSRWLPARWRSF*ASSAPG
Trigger: GCCGGGAGCTGAAGAGGCCCAGAAGGAACGCCAGCG...TGCTGGCAGCCACCTTGAGACCTCACCGGGCCTGTGATATTTGCTCTCCTGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
CDS-3UTR CCA 90 bp ACAGAGGTGAAGGCTCCTCAACTCAGAAGCACAAATTGTAGGGGACAGGGTGGGTGTGCCCTCCCCACCTaGAGAGCCCCACACCCGGCG +
Preference number: 4 (lower is better)
Translates to: TEVKAPQLRSTNCRGQGGCALPT*RAPHPA
Trigger: CGCCGGGTGTGGGGCTCTCCAGGTGGGGAGGGCACA...CCCACCCTGTCCCCTACAATTTGTGCTTCTGAGTTGAGGAGCCTTCACCTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CCA 90 bp GGAGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCTCCACTCTGCTGTTTaGCCCTCAGGGGTTCCAGGG +
Preference number: 4 (lower is better)
Translates to: GGGEEASQSRKSLDSVKGLHSAV*PSGVPG
Trigger: CCCTGGAACCCCTGAGGGCCAAACAGCAGAGTGGAG...ACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
CDS-3UTR CCA 90 bp GGAGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTGTGGCTCCAAGGTCCTaGGGAGGTGGATCACGACGA +
Preference number: 4 (lower is better)
Translates to: GGGEEASQSRKSLDSVKGVAPRS*GGGSRR
Trigger: TCGTCGTGATCCACCTCCCCAGGACCTTGGAGCCAC...ACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552285.5
CDS-3UTR TCA 90 bp GTTCAGGAGAGCAAATATCACAGGCCCGGTGAGGTCTCAAGGTGGCTGCCAGCAGGCTCTGCCCTCCCATaGCAGGCAACGGCAGGATCT +
Preference number: 4 (lower is better)
Translates to: VQESKYHRPGEVSRWLPAGSALP*QATAGS
Trigger: AGATCCTGCCGTTGCCTGTCATGGGAGGGCAGAGCC...TGCTGGCAGCCACCTTGAGACCTCACCGGGCCTGTGATATTTGCTCTCCTGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
CDS-3UTR TCA 90 bp AGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCAGGGAGCACCAGAAGCTaGATCTGCTGCCTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: RWGGGKPVQEESGFREGSGSTRS*ICCLRA
Trigger: AGCCCTGAGGCAGCAGATTCAGCTTCTGGTGCTCCC...TGACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR TCA 90 bp GTTCAGGAGAGCAAATATCACAGGCCCGGTGAGGTCTCAAGGTGGCTGCCAGCAGAGCCGGTCTCGGTCTaGCGGAAGCAGGATCCCTTC +
Preference number: 4 (lower is better)
Translates to: VQESKYHRPGEVSRWLPAEPVSV*RKQDPF
Trigger: GAAGGGATCCTGCTTCCGTCAGACCGAGACCGGCTC...TGCTGGCAGCCACCTTGAGACCTCACCGGGCCTGTGATATTTGCTCTCCTGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
CDS-3UTR TCA 90 bp AGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCATGCCCGATCCCGCTCTaGCTCCTTCTTCAGCCCATC +
Preference number: 4 (lower is better)
Translates to: RWGGGKPVQEESGFREGSCPIPL*LLLQPI
Trigger: GATGGGCTGAAGAAGGAGTCAGAGCGGGATCGGGCA...TGACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR TCA 90 bp AGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCAATATCACAGGCCCGGTaGGGTCTCAAGGTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: RWGGGKPVQEESGFREGSISQAR*GLKVAA
Trigger: GGCAGCCACCTTGAGACCTCACCGGGCCTGTGATAT...TGACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
CDS-3UTR TCA 90 bp GGAGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTTTGTCTGCCCTCCCATaGCAGGCAACGGCAGGATCT +
Preference number: 4 (lower is better)
Translates to: GGGEEASQSRKSLDSVKGLSALP*QATAGS
Trigger: AGATCCTGCCGTTGCCTGTCATGGGAGGGCAGACAA...ACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439210.6
CDS-3UTR GCA 90 bp GTCACAGAGGAACCGAACCTCGGCCTCCCGGGGCCTCCCATTAAGGTCGCACTTCGCACTTGGACCCATTaGCATAGGTCTGGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: VTEEPNLGLPGPPIKVALRTWTH*HRSGCG
Trigger: ACCACAGCCAGACCTATGGCAATGGGTCCAAGTGCG...AAGTGCGACCTTAATGGGAGGCCCCGGGAGGCCGAGGTTCGGTTCCTCTGTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552787.5
CDS-3UTR GCA 90 bp GGCAGGTGGGGGCCTGCTTGCTCAGTGCCTGCTAAGTGTCCTGCCCTCCTTGCTATCAGTCAGCCAACGTaGACCCTCTTCAGTCCCTTC +
Preference number: 4 (lower is better)
Translates to: GRWGPACSVPAKCPALLAISQPT*TLFSPF
Trigger: GAAGGGACTGAAGAGGGTGCACGTTGGCTGACTGAT...AGCAAGGAGGGCAGGACACTTAGCAGGCACTGAGCAAGCAGGCCCCCACCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
CDS-3UTR GCA 90 bp GGAGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCTCTCCAGCTCTTTCTaGCGCTGGCGTTCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: GGGEEASQSRKSLDSVKGLSSSF*RWRSFW
Trigger: CCAGAAGGAACGCCAGCGGCAGAAAGAGCTGGAGAG...ACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR GCA 90 bp ATCACTAAGGGCAGGTGGGGGCCTGCTTGCTCAGTGCCTGCTAAGTGTCCTGCCCTCTCCAGCTCTTTCTaGCGCTGGCGTTCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: ITKGRWGPACSVPAKCPALSSSF*RWRSFW
Trigger: CCAGAAGGAACGCCAGCGGCAGAAAGAGCTGGAGAG...GGCAGGACACTTAGCAGGCACTGAGCAAGCAGGCCCCCACCTGCCCTTAGTGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
CDS-3UTR GCA 90 bp ATCACTAAGGGCAGGTGGGGGCCTGCTTGCTCAGTGCCTGCTAAGTGTCCTGCCGTGTCCTGCCCTCCTTaGTCTCTCTACCCACCTCCA +
Preference number: 4 (lower is better)
Translates to: ITKGRWGPACSVPAKCPAVSCPP*SLYPPP
Trigger: TGGAGGTGGGTAGAGAGAGCAAGGAGGGCAGGACAC...GGCAGGACACTTAGCAGGCACTGAGCAAGCAGGCCCCCACCTGCCCTTAGTGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
CDS-3UTR GCA 90 bp GGAGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTGTGTCCTGCCCTCCTTaGTCTCTCTACCCACCTCCA +
Preference number: 4 (lower is better)
Translates to: GGGEEASQSRKSLDSVKGVSCPP*SLYPPP
Trigger: TGGAGGTGGGTAGAGAGAGCAAGGAGGGCAGGACAC...ACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
CDS-3UTR GCA 90 bp AGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCAGGCCTGCTTGCTCAGTaGCTGCTAAGTGTCCTGCCC +
Preference number: 4 (lower is better)
Translates to: RWGGGKPVQEESGFREGSGLLAQ*LLSVLP
Trigger: GGGCAGGACACTTAGCAGGCACTGAGCAAGCAGGCC...TGACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
CDS-3UTR GCA 90 bp ATCACTAAGGGCAGGTGGGGGCCTGCTTGCTCAGTGCCTGCTAAGTGTCCTGCCAGGTGGGGGCCTGCTTaGTCAGTGCCTGCTAAGTGT +
Preference number: 4 (lower is better)
Translates to: ITKGRWGPACSVPAKCPARWGPA*SVPAKC
Trigger: ACACTTAGCAGGCACTGAGCAAGCAGGCCCCCACCT...GGCAGGACACTTAGCAGGCACTGAGCAAGCAGGCCCCCACCTGCCCTTAGTGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
CDS-3UTR GCA 90 bp GGAGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCGGACCCGGACTCTGTaGTCAGGATCCTCCTCTGTA +
Preference number: 4 (lower is better)
Translates to: GGGEEASQSRKSLDSVKGRTRTL*SGSSSV
Trigger: TACAGAGGAGGATCCTGAGCACAGAGTCCGGGTCCG...ACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315970.12
ENST00000389146.10
CDS-3UTR CCA 90 bp AGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCAAAGGGTGACAGAGGATaGCCTGCGGTGCAGCACTGG +
Preference number: 4 (lower is better)
Translates to: RWGGGKPVQEESGFREGSKGDRG*PAVQHW
Trigger: CCAGTGCTGCACCGCAGGCCATCCTCTGTCACCCTT...TGACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR CCA 90 bp GGAGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTGTGCCACCCCAGACTTaGTCTCACTCCACACTTGGG +
Preference number: 4 (lower is better)
Translates to: GGGEEASQSRKSLDSVKGVPPQT*SHSTLG
Trigger: CCCAAGTGTGGAGTGAGACCAAGTCTGGGGTGGCAC...ACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR CCA 90 bp ATCACTAAGGGCAGGTGGGGGCCTGCTTGCTCAGTGCCTGCTAAGTGTCCTGCCGTGCCACCCCAGACTTaGTCTCACTCCACACTTGGG +
Preference number: 4 (lower is better)
Translates to: ITKGRWGPACSVPAKCPAVPPQT*SHSTLG
Trigger: CCCAAGTGTGGAGTGAGACCAAGTCTGGGGTGGCAC...GGCAGGACACTTAGCAGGCACTGAGCAAGCAGGCCCCCACCTGCCCTTAGTGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
ENST00000551035.5
CDS-3UTR CCA 90 bp ATCACTAAGGGCAGGTGGGGGCCTGCTTGCTCAGTGCCTGCTAAGTGTCCTGCCGCACCTGCCATCTTTTaGGGTGCCACCCCAGACTTG +
Preference number: 4 (lower is better)
Translates to: ITKGRWGPACSVPAKCPAAPAIF*GATPDL
Trigger: CAAGTCTGGGGTGGCACCCCAAAAGATGGCAGGTGC...GGCAGGACACTTAGCAGGCACTGAGCAAGCAGGCCCCCACCTGCCCTTAGTGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
ENST00000551035.5
CDS-3UTR CCA 90 bp GGAGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTGCACCTGCCATCTTTTaGGGTGCCACCCCAGACTTG +
Preference number: 4 (lower is better)
Translates to: GGGEEASQSRKSLDSVKGAPAIF*GATPDL
Trigger: CAAGTCTGGGGTGGCACCCCAAAAGATGGCAGGTGC...ACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR CCA 90 bp ATCACTAAGGGCAGGTGGGGGCCTGCTTGCTCAGTGCCTGCTAAGTGTCCTGCCCCTTACTGTCATCCTTaGTCGGGCTCGCACCTGCCA +
Preference number: 4 (lower is better)
Translates to: ITKGRWGPACSVPAKCPAPYCHP*SGSHLP
Trigger: TGGCAGGTGCGAGCCCGACCAAGGATGACAGTAAGG...GGCAGGACACTTAGCAGGCACTGAGCAAGCAGGCCCCCACCTGCCCTTAGTGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
ENST00000551035.5
CDS-3UTR CCA 90 bp GGCAGGTGGGGGCCTGCTTGCTCAGTGCCTGCTAAGTGTCCTGCCCTCCTTGCTTCCACAGGCTGCTCTTaGCCTATATTTGGCTTCCCC +
Preference number: 4 (lower is better)
Translates to: GRWGPACSVPAKCPALLASTGCS*PIFGFP
Trigger: GGGGAAGCCAAATATAGGCCAAGAGCAGCCTGTGGA...AGCAAGGAGGGCAGGACACTTAGCAGGCACTGAGCAAGCAGGCCCCCACCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
CDS-3UTR CCA 90 bp GGCAGGTGGGGGCCTGCTTGCTCAGTGCCTGCTAAGTGTCCTGCCCTCCTTGCTCTCTCTCTGCCGTTCTaGATCACCCCTTTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: GRWGPACSVPAKCPALLALSLPF*ITPFLL
Trigger: GAGAAGGAAAGGGGTGATCCAGAACGGCAGAGAGAG...AGCAAGGAGGGCAGGACACTTAGCAGGCACTGAGCAAGCAGGCCCCCACCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
CDS-3UTR CCA 90 bp AGGGTAAAACGACTCCAAACATCACTAAGGGCAGGTGGGGGCCTGCTTGCTCAGCGCTGGCGTTCCTTCTaGGCCTCTTCAGCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: RVKRLQTSLRAGGGLLAQRWRSF*ASSAPG
Trigger: GCCGGGAGCTGAAGAGGCCCAGAAGGAACGCCAGCG...CTGAGCAAGCAGGCCCCCACCTGCCCTTAGTGATGTTTGGAGTCGTTTTACCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
ENST00000551035.5
CDS-3UTR CCA 90 bp GGAGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTAGCTCTTTCTGCCGCTaGCGTTCCTTCTGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: GGGEEASQSRKSLDSVKGSSFCR*RSFWAS
Trigger: AGAGGCCCAGAAGGAACGCCAGCGGCAGAAAGAGCT...ACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR CCA 90 bp ATCACTAAGGGCAGGTGGGGGCCTGCTTGCTCAGTGCCTGCTAAGTGTCCTGCCAGCTCTTTCTGCCGCTaGCGTTCCTTCTGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: ITKGRWGPACSVPAKCPASSFCR*RSFWAS
Trigger: AGAGGCCCAGAAGGAACGCCAGCGGCAGAAAGAGCT...GGCAGGACACTTAGCAGGCACTGAGCAAGCAGGCCCCCACCTGCCCTTAGTGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
CDS-3UTR TCA 90 bp GGAGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCTTTCACGCTGGAAGTaGATAGCTCCAGCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: GGGEEASQSRKSLDSVKGLSRWK*IAPAGR
Trigger: CCTGCCAGCTGGAGCTATTCACTTCCAGCGTGAAAG...ACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR TCA 90 bp GGCAGGTGGGGGCCTGCTTGCTCAGTGCCTGCTAAGTGTCCTGCCCTCCTTGCTATCCCAGTCGAAGGCTaGTTGGTAGTAGCCGAGATA +
Preference number: 4 (lower is better)
Translates to: GRWGPACSVPAKCPALLAIPVEG*LVVAEI
Trigger: TATCTCGGCTACTACCAATCAGCCTTCGACTGGGAT...AGCAAGGAGGGCAGGACACTTAGCAGGCACTGAGCAAGCAGGCCCCCACCTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000551035.5
CDS-3UTR TCA 90 bp GTTCAGGAGAGCAAATATCACAGGCCCGGTGAGGTCTCAAGGTGGCTGCCAGCAGGGAGCACCAGAAGCTaGATCTGCTGCCTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: VQESKYHRPGEVSRWLPAGSTRS*ICCLRA
Trigger: AGCCCTGAGGCAGCAGATTCAGCTTCTGGTGCTCCC...TGCTGGCAGCCACCTTGAGACCTCACCGGGCCTGTGATATTTGCTCTCCTGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
CDS-3UTR TCA 90 bp AGGGTAAAACGACTCCAAACATCACTAAGGGCAGGTGGGGGCCTGCTTGCTCAGGAGCCGGTCTCGGTCTaGCGGAAGCAGGATCCCTTC +
Preference number: 4 (lower is better)
Translates to: RVKRLQTSLRAGGGLLAQEPVSV*RKQDPF
Trigger: GAAGGGATCCTGCTTCCGTCAGACCGAGACCGGCTC...CTGAGCAAGCAGGCCCCCACCTGCCCTTAGTGATGTTTGGAGTCGTTTTACCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
ENST00000551035.5
CDS-3UTR TCA 90 bp GTTCAGGAGAGCAAATATCACAGGCCCGGTGAGGTCTCAAGGTGGCTGCCAGCAATATCACAGGCCCGGTaGGGTCTCAAGGTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: VQESKYHRPGEVSRWLPAISQAR*GLKVAA
Trigger: GGCAGCCACCTTGAGACCTCACCGGGCCTGTGATAT...TGCTGGCAGCCACCTTGAGACCTCACCGGGCCTGTGATATTTGCTCTCCTGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
CDS-3UTR TCA 90 bp AAGGCTCCTCAACTCAGAAGCACAAATTGTAGGGGACAGGGTGGGCAGGGAAAGCGAGACGGAGCTTGGTaGCCCGGACCCGGACTCTGT +
Preference number: 4 (lower is better)
Translates to: KAPQLRSTNCRGQGGQGKRDGAW*PGPGLC
Trigger: ACAGAGTCCGGGTCCGGGTCACCAAGCTCCGTCTCG...CTTTCCCTGCCCACCCTGTCCCCTACAATTTGTGCTTCTGAGTTGAGGAGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315970.12
CDS-3UTR TCA 90 bp AGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCAAGGACAGTCAGATCCTaGTTAGGGCCTCCGAGACGG +
Preference number: 4 (lower is better)
Translates to: RWGGGKPVQEESGFREGSRTVRS*LGPPRR
Trigger: CCGTCTCGGAGGCCCTAATCAGGATCTGACTGTCCT...TGACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315970.12
ENST00000389146.10
CDS-3UTR GCA 90 bp GGAGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCGCACTTGGACCCATTaGCATAGGTCTGGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: GGGEEASQSRKSLDSVKGRTWTH*HRSGCG
Trigger: ACCACAGCCAGACCTATGGCAATGGGTCCAAGTGCG...ACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000439210.6
ENST00000552285.5
CDS-3UTR GCA 90 bp ATCACTAAGGGCAGGTGGGGGCCTGCTTGCTCAGTGCCTGCTAAGTGTCCTGCCCGCACTTGGACCCATTaGCATAGGTCTGGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: ITKGRWGPACSVPAKCPARTWTH*HRSGCG
Trigger: ACCACAGCCAGACCTATGGCAATGGGTCCAAGTGCG...GGCAGGACACTTAGCAGGCACTGAGCAAGCAGGCCCCCACCTGCCCTTAGTGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
CDS-3UTR GCA 90 bp GGAGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTGTCCCCAGAGATACCTaGACCCTCGTCACAGAGGAA +
Preference number: 4 (lower is better)
Translates to: GGGEEASQSRKSLDSVKGVPRDT*TLVTEE
Trigger: TTCCTCTGTGACGAGGGTGCAGGTATCTCTGGGGAC...ACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR GCA 90 bp GGACAAGGGCTCGTCCACGCGATCGATGTAGTCCCCAGAGATACCTGCACCCTCGTCCCCAGAGATACCTaGACCCTCGTCACAGAGGAA +
Preference number: 4 (lower is better)
Translates to: GQGLVHAIDVVPRDTCTLVPRDT*TLVTEE
Trigger: TTCCTCTGTGACGAGGGTGCAGGTATCTCTGGGGAC...GAGGGTGCAGGTATCTCTGGGGACTACATCGATCGCGTGGACGAGCCCTTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552787.5
CDS-3UTR GCA 90 bp GTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGGAGGGAGGATGGCCTGCGGTaGAGCACTGGGTGGGGGCCG +
Preference number: 4 (lower is better)
Translates to: VQEHGGCFTPFSLGLCWREDGLR*STGWGP
Trigger: CGGCCCCCACCCAGTGCTGCACCGCAGGCCATCCTC...CCTCCAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR GCA 90 bp GGTGATAGGCAGCATTCTACCATTTCCTCAGCAACAGAGGTGAAGGCTCCTCAAGAGGATGGCCTGCGGTaGAGCACTGGGTGGGGGCCG +
Preference number: 4 (lower is better)
Translates to: GDRQHSTISSATEVKAPQEDGLR*STGWGP
Trigger: CGGCCCCCACCCAGTGCTGCACCGCAGGCCATCCTC...TTGAGGAGCCTTCACCTCTGTTGCTGAGGAAATGGTAGAATGCTGCCTATCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR GCA 90 bp GGCAGGTGGGGGCCTGCTTGCTCAGTGCCTGCTAAGTGTCCTGCCCTCCTTGCTGCATCATCCACAGGCTaGTCTTGGCCTATATTTGGC +
Preference number: 4 (lower is better)
Translates to: GRWGPACSVPAKCPALLAASSTG*SWPIFG
Trigger: GCCAAATATAGGCCAAGAGCAGCCTGTGGATGATGC...AGCAAGGAGGGCAGGACACTTAGCAGGCACTGAGCAAGCAGGCCCCCACCTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
CDS-3UTR GCA 90 bp GGAGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCCTCTGAGGGACTTCTaGAGCATCATCCACAGGCTG +
Preference number: 4 (lower is better)
Translates to: GGGEEASQSRKSLDSVKGPLRDF*SIIHRL
Trigger: CAGCCTGTGGATGATGCTGCAGAAGTCCCTCAGAGG...ACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR GCA 90 bp GTTCAGGAGAGCAAATATCACAGGCCCGGTGAGGTCTCAAGGTGGCTGCCAGCACCAGTTCCCGCTCCATaGCAGCCTTCACCTCCGAAC +
Preference number: 4 (lower is better)
Translates to: VQESKYHRPGEVSRWLPAPVPAP*QPSPPN
Trigger: GTTCGGAGGTGAAGGCTGGCATGGAGCGGGAACTGG...TGCTGGCAGCCACCTTGAGACCTCACCGGGCCTGTGATATTTGCTCTCCTGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
CDS-3UTR GCA 90 bp AGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCACTCTCCAGCTCTTTCTaGCGCTGGCGTTCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: RWGGGKPVQEESGFREGSLSSSF*RWRSFW
Trigger: CCAGAAGGAACGCCAGCGGCAGAAAGAGCTGGAGAG...TGACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR GCA 90 bp GTTCAGGAGAGCAAATATCACAGGCCCGGTGAGGTCTCAAGGTGGCTGCCAGCACCACACCCACAGAGTTaGCCGAGAGGTCCACAGCTC +
Preference number: 4 (lower is better)
Translates to: VQESKYHRPGEVSRWLPAPHPQS*PRGPQL
Trigger: GAGCTGTGGACCTCTCGGGCAACTCTGTGGGTGTGG...TGCTGGCAGCCACCTTGAGACCTCACCGGGCCTGTGATATTTGCTCTCCTGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
CDS-3UTR GCA 90 bp AGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCAGTGTCCTGCCCTCCTTaGTCTCTCTACCCACCTCCA +
Preference number: 4 (lower is better)
Translates to: RWGGGKPVQEESGFREGSVSCPP*SLYPPP
Trigger: TGGAGGTGGGTAGAGAGAGCAAGGAGGGCAGGACAC...TGACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
CDS-3UTR GCA 90 bp GTTCAGGAGAGCAAATATCACAGGCCCGGTGAGGTCTCAAGGTGGCTGCCAGCAGGCCTGCTTGCTCAGTaGCTGCTAAGTGTCCTGCCC +
Preference number: 4 (lower is better)
Translates to: VQESKYHRPGEVSRWLPAGLLAQ*LLSVLP
Trigger: GGGCAGGACACTTAGCAGGCACTGAGCAAGCAGGCC...TGCTGGCAGCCACCTTGAGACCTCACCGGGCCTGTGATATTTGCTCTCCTGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
CDS-3UTR GCA 90 bp AGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCAAGGTGGGGGCCTGCTTaGTCAGTGCCTGCTAAGTGT +
Preference number: 4 (lower is better)
Translates to: RWGGGKPVQEESGFREGSRWGPA*SVPAKC
Trigger: ACACTTAGCAGGCACTGAGCAAGCAGGCCCCCACCT...TGACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
CDS-3UTR GCA 90 bp GGCAGGTGGGGGCCTGCTTGCTCAGTGCCTGCTAAGTGTCCTGCCCTCCTTGCTGATCTCAATTTTCCCTaGAGCTGTGAGTCCCTCCCT +
Preference number: 4 (lower is better)
Translates to: GRWGPACSVPAKCPALLADLNFP*SCESLP
Trigger: AGGGAGGGACTCACAGCTGCAGGGAAAATTGAGATC...AGCAAGGAGGGCAGGACACTTAGCAGGCACTGAGCAAGCAGGCCCCCACCTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315970.12
CDS-3UTR CCA 90 bp GGAGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTACCACGTCCGAAGATTaGCTCTGCCCTCCCATGACA +
Preference number: 4 (lower is better)
Translates to: GGGEEASQSRKSLDSVKGTTSED*LCPPMT
Trigger: TGTCATGGGAGGGCAGAGCCAATCTTCGGACGTGGT...ACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR CCA 90 bp ATCACTAAGGGCAGGTGGGGGCCTGCTTGCTCAGTGCCTGCTAAGTGTCCTGCCGTGAATAGCTCCAGCTaGCAGGCGACACTCATAGCG +
Preference number: 4 (lower is better)
Translates to: ITKGRWGPACSVPAKCPAVNSSS*QATLIA
Trigger: CGCTATGAGTGTCGCCTGCCAGCTGGAGCTATTCAC...GGCAGGACACTTAGCAGGCACTGAGCAAGCAGGCCCCCACCTGCCCTTAGTGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
CDS-3UTR CCA 90 bp GGAGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTGTGAATAGCTCCAGCTaGCAGGCGACACTCATAGCG +
Preference number: 4 (lower is better)
Translates to: GGGEEASQSRKSLDSVKGVNSSS*QATLIA
Trigger: CGCTATGAGTGTCGCCTGCCAGCTGGAGCTATTCAC...ACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR CCA 90 bp GGAGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTGCCGAGGAGTGCGAATaGTCAGCACATAAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: GGGEEASQSRKSLDSVKGAEECE*SAHKSR
Trigger: CCTGCTCTTATGTGCTGACCATTCGCACTCCTCGGC...ACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR CCA 90 bp GTTCAGGAGAGCAAATATCACAGGCCCGGTGAGGTCTCAAGGTGGCTGCCAGCAAAGGGTGACAGAGGATaGCCTGCGGTGCAGCACTGG +
Preference number: 4 (lower is better)
Translates to: VQESKYHRPGEVSRWLPAKGDRG*PAVQHW
Trigger: CCAGTGCTGCACCGCAGGCCATCCTCTGTCACCCTT...TGCTGGCAGCCACCTTGAGACCTCACCGGGCCTGTGATATTTGCTCTCCTGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
CDS-3UTR CCA 90 bp GGAGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTGTCTCACTCCACACTTaGGGGCCTAGATCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: GGGEEASQSRKSLDSVKGVSLHT*GPRSCS
Trigger: GCTGCAAGATCTAGGCCCCCAAGTGTGGAGTGAGAC...ACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR CCA 90 bp AGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCAGTGCCACCCCAGACTTaGTCTCACTCCACACTTGGG +
Preference number: 4 (lower is better)
Translates to: RWGGGKPVQEESGFREGSVPPQT*SHSTLG
Trigger: CCCAAGTGTGGAGTGAGACCAAGTCTGGGGTGGCAC...TGACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR CCA 90 bp AGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCAGCACCTGCCATCTTTTaGGGTGCCACCCCAGACTTG +
Preference number: 4 (lower is better)
Translates to: RWGGGKPVQEESGFREGSAPAIF*GATPDL
Trigger: CAAGTCTGGGGTGGCACCCCAAAAGATGGCAGGTGC...TGACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR CCA 90 bp AGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCACCTTACTGTCATCCTTaGTCGGGCTCGCACCTGCCA +
Preference number: 4 (lower is better)
Translates to: RWGGGKPVQEESGFREGSPYCHP*SGSHLP
Trigger: TGGCAGGTGCGAGCCCGACCAAGGATGACAGTAAGG...TGACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR CCA 90 bp GTTCAGGAGAGCAAATATCACAGGCCCGGTGAGGTCTCAAGGTGGCTGCCAGCACTCCACTCTGCTGTTTaGCCCTCAGGGGTTCCAGGG +
Preference number: 4 (lower is better)
Translates to: VQESKYHRPGEVSRWLPALHSAV*PSGVPG
Trigger: CCCTGGAACCCCTGAGGGCCAAACAGCAGAGTGGAG...TGCTGGCAGCCACCTTGAGACCTCACCGGGCCTGTGATATTTGCTCTCCTGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
CDS-3UTR TCA 90 bp ATCACTAAGGGCAGGTGGGGGCCTGCTTGCTCAGTGCCTGCTAAGTGTCCTGCCTTCTCTGGTTCCCTCTaGGGGACTTCTGCAGCATCA +
Preference number: 4 (lower is better)
Translates to: ITKGRWGPACSVPAKCPAFSGSL*GTSAAS
Trigger: TGATGCTGCAGAAGTCCCTCAGAGGGAACCAGAGAA...GGCAGGACACTTAGCAGGCACTGAGCAAGCAGGCCCCCACCTGCCCTTAGTGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
CDS-3UTR TCA 90 bp GGAGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTTTCTCTGGTTCCCTCTaGGGGACTTCTGCAGCATCA +
Preference number: 4 (lower is better)
Translates to: GGGEEASQSRKSLDSVKGFSGSL*GTSAAS
Trigger: TGATGCTGCAGAAGTCCCTCAGAGGGAACCAGAGAA...ACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR TCA 90 bp AGGGTAAAACGACTCCAAACATCACTAAGGGCAGGTGGGGGCCTGCTTGCTCAGATATCACAGGCCCGGTaGGGTCTCAAGGTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: RVKRLQTSLRAGGGLLAQISQAR*GLKVAA
Trigger: GGCAGCCACCTTGAGACCTCACCGGGCCTGTGATAT...CTGAGCAAGCAGGCCCCCACCTGCCCTTAGTGATGTTTGGAGTCGTTTTACCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
ENST00000551035.5
CDS-3UTR TCA 90 bp GGAGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTGGAGAGGAAGAGGATTaGGTGAGAGTTCAGGAGAGC +
Preference number: 4 (lower is better)
Translates to: GGGEEASQSRKSLDSVKGGEEED*VRVQES
Trigger: GCTCTCCTGAACTCTCACTCAATCCTCTTCCTCTCC...ACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
CDS-3UTR TCA 90 bp ATCACTAAGGGCAGGTGGGGGCCTGCTTGCTCAGTGCCTGCTAAGTGTCCTGCCGGAGAGGAAGAGGATTaGGTGAGAGTTCAGGAGAGC +
Preference number: 4 (lower is better)
Translates to: ITKGRWGPACSVPAKCPAGEEED*VRVQES
Trigger: GCTCTCCTGAACTCTCACTCAATCCTCTTCCTCTCC...GGCAGGACACTTAGCAGGCACTGAGCAAGCAGGCCCCCACCTGCCCTTAGTGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
CDS-3UTR GCA 90 bp AGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCACGCACTTGGACCCATTaGCATAGGTCTGGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: RWGGGKPVQEESGFREGSRTWTH*HRSGCG
Trigger: ACCACAGCCAGACCTATGGCAATGGGTCCAAGTGCG...TGACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000439210.6
ENST00000552285.5
CDS-3UTR GCA 90 bp AGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCAGTCCCCAGAGATACCTaGACCCTCGTCACAGAGGAA +
Preference number: 4 (lower is better)
Translates to: RWGGGKPVQEESGFREGSVPRDT*TLVTEE
Trigger: TTCCTCTGTGACGAGGGTGCAGGTATCTCTGGGGAC...TGACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR GCA 90 bp AGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCAGGCAGAGCCGAGGAGTaGGAATGGTCAGCACATAAG +
Preference number: 4 (lower is better)
Translates to: RWGGGKPVQEESGFREGSGRAEE*EWSAHK
Trigger: CTTATGTGCTGACCATTCGCACTCCTCGGCTCTGCC...TGACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR GCA 90 bp AGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCACCTCTGAGGGACTTCTaGAGCATCATCCACAGGCTG +
Preference number: 4 (lower is better)
Translates to: RWGGGKPVQEESGFREGSPLRDF*SIIHRL
Trigger: CAGCCTGTGGATGATGCTGCAGAAGTCCCTCAGAGG...TGACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR GCA 90 bp GGAGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTATCAGTCAGCCAACGTaGACCCTCTTCAGTCCCTTC +
Preference number: 4 (lower is better)
Translates to: GGGEEASQSRKSLDSVKGISQPT*TLFSPF
Trigger: GAAGGGACTGAAGAGGGTGCACGTTGGCTGACTGAT...ACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR CCA 90 bp AGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCAGCAGTCCTAACAAACTaGACAGCAGCGTTTCCGCCG +
Preference number: 4 (lower is better)
Translates to: RWGGGKPVQEESGFREGSAVLTN*TAAFPP
Trigger: CGGCGGAAACGCTGCTGTCCAGTTTGTTAGGACTGC...TGACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR CCA 90 bp AGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCAACCACGTCCGAAGATTaGCTCTGCCCTCCCATGACA +
Preference number: 4 (lower is better)
Translates to: RWGGGKPVQEESGFREGSTTSED*LCPPMT
Trigger: TGTCATGGGAGGGCAGAGCCAATCTTCGGACGTGGT...TGACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR CCA 90 bp AGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCAGTGAATAGCTCCAGCTaGCAGGCGACACTCATAGCG +
Preference number: 4 (lower is better)
Translates to: RWGGGKPVQEESGFREGSVNSSS*QATLIA
Trigger: CGCTATGAGTGTCGCCTGCCAGCTGGAGCTATTCAC...TGACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR CCA 90 bp CCAGAGATACCTGCACCCTCGTCACAGAGGAACCGAACCTCGGCCTCCCGGGGCTCTGAATCTTCCATGTaGTATTGCTGGATGTGGCGT +
Preference number: 4 (lower is better)
Translates to: PEIPAPSSQRNRTSASRGSESSM*YCWMWR
Trigger: ACGCCACATCCAGCAATACCACATGGAAGATTCAGA...GCCCCGGGAGGCCGAGGTTCGGTTCCTCTGTGACGAGGGTGCAGGTATCTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552787.5
CDS-3UTR CCA 90 bp GGAGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTGCTGCTTGGAGGCCTTaGCTGTTTCATCATCCCAGT +
Preference number: 4 (lower is better)
Translates to: GGGEEASQSRKSLDSVKGAAWRP*LFHHPS
Trigger: ACTGGGATGATGAAACAGCCAAGGCCTCCAAGCAGC...ACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000439210.6
ENST00000552285.5
CDS-3UTR CCA 90 bp AGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCAGCCGAGGAGTGCGAATaGTCAGCACATAAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: RWGGGKPVQEESGFREGSAEECE*SAHKSR
Trigger: CCTGCTCTTATGTGCTGACCATTCGCACTCCTCGGC...TGACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR CCA 90 bp AGGGTAAAACGACTCCAAACATCACTAAGGGCAGGTGGGGGCCTGCTTGCTCAGAAGGGTGACAGAGGATaGCCTGCGGTGCAGCACTGG +
Preference number: 4 (lower is better)
Translates to: RVKRLQTSLRAGGGLLAQKGDRG*PAVQHW
Trigger: CCAGTGCTGCACCGCAGGCCATCCTCTGTCACCCTT...CTGAGCAAGCAGGCCCCCACCTGCCCTTAGTGATGTTTGGAGTCGTTTTACCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
ENST00000551035.5
CDS-3UTR CCA 90 bp AGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCAGTCTCACTCCACACTTaGGGGCCTAGATCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: RWGGGKPVQEESGFREGSVSLHT*GPRSCS
Trigger: GCTGCAAGATCTAGGCCCCCAAGTGTGGAGTGAGAC...TGACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR CCA 90 bp GTTCAGGAGAGCAAATATCACAGGCCCGGTGAGGTCTCAAGGTGGCTGCCAGCAGCACCTGCCATCTTTTaGGGTGCCACCCCAGACTTG +
Preference number: 4 (lower is better)
Translates to: VQESKYHRPGEVSRWLPAAPAIF*GATPDL
Trigger: CAAGTCTGGGGTGGCACCCCAAAAGATGGCAGGTGC...TGCTGGCAGCCACCTTGAGACCTCACCGGGCCTGTGATATTTGCTCTCCTGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
CDS-3UTR CCA 90 bp GTTCAGGAGAGCAAATATCACAGGCCCGGTGAGGTCTCAAGGTGGCTGCCAGCACCTTACTGTCATCCTTaGTCGGGCTCGCACCTGCCA +
Preference number: 4 (lower is better)
Translates to: VQESKYHRPGEVSRWLPAPYCHP*SGSHLP
Trigger: TGGCAGGTGCGAGCCCGACCAAGGATGACAGTAAGG...TGCTGGCAGCCACCTTGAGACCTCACCGGGCCTGTGATATTTGCTCTCCTGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
CDS-3UTR CCA 90 bp ATCACTAAGGGCAGGTGGGGGCCTGCTTGCTCAGTGCCTGCTAAGTGTCCTGCCTGGGGCCTGGTCCTCTaGCTCATTAAGCATCTTCCA +
Preference number: 4 (lower is better)
Translates to: ITKGRWGPACSVPAKCPAWGLVL*LIKHLP
Trigger: TGGAAGATGCTTAATGAGCCAGAGGACCAGGCCCCA...GGCAGGACACTTAGCAGGCACTGAGCAAGCAGGCCCCCACCTGCCCTTAGTGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
ENST00000551035.5
CDS-3UTR CCA 90 bp GGAGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTTGGGGCCTGGTCCTCTaGCTCATTAAGCATCTTCCA +
Preference number: 4 (lower is better)
Translates to: GGGEEASQSRKSLDSVKGWGLVL*LIKHLP
Trigger: TGGAAGATGCTTAATGAGCCAGAGGACCAGGCCCCA...ACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR CCA 90 bp GGAGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTTCCACAGGCTGCTCTTaGCCTATATTTGGCTTCCCC +
Preference number: 4 (lower is better)
Translates to: GGGEEASQSRKSLDSVKGSTGCS*PIFGFP
Trigger: GGGGAAGCCAAATATAGGCCAAGAGCAGCCTGTGGA...ACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR CCA 90 bp GGAGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCTCTCTCTGCCGTTCTaGATCACCCCTTTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: GGGEEASQSRKSLDSVKGLSLPF*ITPFLL
Trigger: GAGAAGGAAAGGGGTGATCCAGAACGGCAGAGAGAG...ACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR CCA 90 bp GTTCAGGAGAGCAAATATCACAGGCCCGGTGAGGTCTCAAGGTGGCTGCCAGCAAGCTCTTTCTGCCGCTaGCGTTCCTTCTGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: VQESKYHRPGEVSRWLPASSFCR*RSFWAS
Trigger: AGAGGCCCAGAAGGAACGCCAGCGGCAGAAAGAGCT...TGCTGGCAGCCACCTTGAGACCTCACCGGGCCTGTGATATTTGCTCTCCTGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
CDS-3UTR CCA 90 bp TGTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGGAGTGTGCCCTCCCCACCTaGAGAGCCCCACACCCGGCG +
Preference number: 4 (lower is better)
Translates to: CSRTWWVLHTFFTGIVLECALPT*RAPHPA
Trigger: CGCCGGGTGTGGGGCTCTCCAGGTGGGGAGGGCACA...CTCCAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CCA 90 bp AGGGTAAAACGACTCCAAACATCACTAAGGGCAGGTGGGGGCCTGCTTGCTCAGCTCCACTCTGCTGTTTaGCCCTCAGGGGTTCCAGGG +
Preference number: 4 (lower is better)
Translates to: RVKRLQTSLRAGGGLLAQLHSAV*PSGVPG
Trigger: CCCTGGAACCCCTGAGGGCCAAACAGCAGAGTGGAG...CTGAGCAAGCAGGCCCCCACCTGCCCTTAGTGATGTTTGGAGTCGTTTTACCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
ENST00000551035.5
CDS-3UTR CCA 90 bp CAGCAAGCAGGGAGCATCTCTCATTGGGCTCAACAACTCAGGGATCCCAGGCCCTCCGAAGATTGGCTCTaGGAAAGAAGGGAGGGTCGG +
Preference number: 4 (lower is better)
Translates to: QQAGSISHWAQQLRDPRPSEDWL*ERREGR
Trigger: CCGACCCTCCCTTCTTTCCCAGAGCCAATCTTCGGA...GGGCCTGGGATCCCTGAGTTGTTGAGCCCAATGAGAGATGCTCCCTGCTTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000550848.5
ENST00000551285.5
CDS-3UTR TCA 90 bp GTTCAGGAGAGCAAATATCACAGGCCCGGTGAGGTCTCAAGGTGGCTGCCAGCACTTTCACGCTGGAAGTaGATAGCTCCAGCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: VQESKYHRPGEVSRWLPALSRWK*IAPAGR
Trigger: CCTGCCAGCTGGAGCTATTCACTTCCAGCGTGAAAG...TGCTGGCAGCCACCTTGAGACCTCACCGGGCCTGTGATATTTGCTCTCCTGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
CDS-3UTR TCA 90 bp GGCAGGTGGGGGCCTGCTTGCTCAGTGCCTGCTAAGTGTCCTGCCCTCCTTGCTCTTTCAGCTCCTCTATaGATCGAATCAAATCCGCAG +
Preference number: 4 (lower is better)
Translates to: GRWGPACSVPAKCPALLALSAPL*IESNPQ
Trigger: CTGCGGATTTGATTCGATTCATAGAGGAGCTGAAAG...AGCAAGGAGGGCAGGACACTTAGCAGGCACTGAGCAAGCAGGCCCCCACCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
CDS-3UTR TCA 90 bp AGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCATTCTCTGGTTCCCTCTaGGGGACTTCTGCAGCATCA +
Preference number: 4 (lower is better)
Translates to: RWGGGKPVQEESGFREGSFSGSL*GTSAAS
Trigger: TGATGCTGCAGAAGTCCCTCAGAGGGAACCAGAGAA...TGACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR TCA 90 bp AGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCAGGAGAGGAAGAGGATTaGGTGAGAGTTCAGGAGAGC +
Preference number: 4 (lower is better)
Translates to: RWGGGKPVQEESGFREGSGEEED*VRVQES
Trigger: GCTCTCCTGAACTCTCACTCAATCCTCTTCCTCTCC...TGACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
CDS-3UTR TCA 90 bp ATCACTAAGGGCAGGTGGGGGCCTGCTTGCTCAGTGCCTGCTAAGTGTCCTGCCGGGAGCACCAGAAGCTaGATCTTCCATGTGGTATTG +
Preference number: 4 (lower is better)
Translates to: ITKGRWGPACSVPAKCPAGSTRS*IFHVVL
Trigger: CAATACCACATGGAAGATTCAGCTTCTGGTGCTCCC...GGCAGGACACTTAGCAGGCACTGAGCAAGCAGGCCCCCACCTGCCCTTAGTGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413095.6
CDS-3UTR TCA 90 bp GGCCTCCCGGGGCCTCCCATTAAGGTCGCACTTGGACCCATTGCCATAGGTCTGCAGCTATTCAATACTTaGTCTTTTGCCACCCCCTGC +
Preference number: 4 (lower is better)
Translates to: GLPGPPIKVALGPIAIGLQLFNT*SFATPC
Trigger: GCAGGGGGTGGCAAAAGATCAAGTATTGAATAGCTG...CAGACCTATGGCAATGGGTCCAAGTGCGACCTTAATGGGAGGCCCCGGGAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000552787.5
CDS-3UTR TCA 90 bp GGAGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCCCATCGGCGCCACATaGTTTTATTGGCTGTACGTT +
Preference number: 4 (lower is better)
Translates to: GGGEEASQSRKSLDSVKGPIGAT*FYWLYV
Trigger: AACGTACAGCCAATAAAATCATGTGGCGCCGATGGG...ACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552285.5
CDS-3UTR GCA 90 bp GGAGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCGTTTAAGACGATGCTaGTTGGAGGCCTTGGCTGTT +
Preference number: 4 (lower is better)
Translates to: GGGEEASQSRKSLDSVKGRLRRC*LEALAV
Trigger: AACAGCCAAGGCCTCCAAGCAGCATCGTCTTAAACG...ACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000439210.6
ENST00000552285.5
CDS-3UTR GCA 90 bp GTTCAGGAGAGCAAATATCACAGGCCCGGTGAGGTCTCAAGGTGGCTGCCAGCAGGCAGAGCCGAGGAGTaGGAATGGTCAGCACATAAG +
Preference number: 4 (lower is better)
Translates to: VQESKYHRPGEVSRWLPAGRAEE*EWSAHK
Trigger: CTTATGTGCTGACCATTCGCACTCCTCGGCTCTGCC...TGCTGGCAGCCACCTTGAGACCTCACCGGGCCTGTGATATTTGCTCTCCTGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
CDS-3UTR GCA 90 bp TTGTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGGAGAGGATGGCCTGCGGTaGAGCACTGGGTGGGGGCCG +
Preference number: 4 (lower is better)
Translates to: LFKNMVGASHLFHWDCAGEDGLR*STGWGP
Trigger: CGGCCCCCACCCAGTGCTGCACCGCAGGCCATCCTC...TCCAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR GCA 90 bp CGAACCTCGGCCTCCCGGGGCCTCCCATTAAGGTCGCACTTGGACCCATTGCCATGGGGGCCTAGATCTTaGAGCTCCTCTATGATTTTA +
Preference number: 4 (lower is better)
Translates to: RTSASRGLPLRSHLDPLPWGPRS*SSSMIL
Trigger: TAAAATCATAGAGGAGCTGCAAGATCTAGGCCCCCA...TGGCAATGGGTCCAAGTGCGACCTTAATGGGAGGCCCCGGGAGGCCGAGGTTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000552787.5
CDS-3UTR GCA 90 bp ATCACTAAGGGCAGGTGGGGGCCTGCTTGCTCAGTGCCTGCTAAGTGTCCTGCCGCATCATCCACAGGCTaGTCTTGGCCTATATTTGGC +
Preference number: 4 (lower is better)
Translates to: ITKGRWGPACSVPAKCPAASSTG*SWPIFG
Trigger: GCCAAATATAGGCCAAGAGCAGCCTGTGGATGATGC...GGCAGGACACTTAGCAGGCACTGAGCAAGCAGGCCCCCACCTGCCCTTAGTGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
CDS-3UTR GCA 90 bp GGAGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTGCATCATCCACAGGCTaGTCTTGGCCTATATTTGGC +
Preference number: 4 (lower is better)
Translates to: GGGEEASQSRKSLDSVKGASSTG*SWPIFG
Trigger: GCCAAATATAGGCCAAGAGCAGCCTGTGGATGATGC...ACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR GCA 90 bp GTTCAGGAGAGCAAATATCACAGGCCCGGTGAGGTCTCAAGGTGGCTGCCAGCACCTCTGAGGGACTTCTaGAGCATCATCCACAGGCTG +
Preference number: 4 (lower is better)
Translates to: VQESKYHRPGEVSRWLPAPLRDF*SIIHRL
Trigger: CAGCCTGTGGATGATGCTGCAGAAGTCCCTCAGAGG...TGCTGGCAGCCACCTTGAGACCTCACCGGGCCTGTGATATTTGCTCTCCTGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
CDS-3UTR GCA 90 bp GGAGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTTCTTCCATCTCTCTCTaGCGTTCTGGATCACCCCTT +
Preference number: 4 (lower is better)
Translates to: GGGEEASQSRKSLDSVKGSSISL*RSGSPL
Trigger: AAGGGGTGATCCAGAACGGCAGAGAGAGATGGAAGA...ACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR GCA 90 bp ATCACTAAGGGCAGGTGGGGGCCTGCTTGCTCAGTGCCTGCTAAGTGTCCTGCCTCTTCCATCTCTCTCTaGCGTTCTGGATCACCCCTT +
Preference number: 4 (lower is better)
Translates to: ITKGRWGPACSVPAKCPASSISL*RSGSPL
Trigger: AAGGGGTGATCCAGAACGGCAGAGAGAGATGGAAGA...GGCAGGACACTTAGCAGGCACTGAGCAAGCAGGCCCCCACCTGCCCTTAGTGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
CDS-3UTR GCA 90 bp AGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCAATCAGTCAGCCAACGTaGACCCTCTTCAGTCCCTTC +
Preference number: 4 (lower is better)
Translates to: RWGGGKPVQEESGFREGSISQPT*TLFSPF
Trigger: GAAGGGACTGAAGAGGGTGCACGTTGGCTGACTGAT...TGACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR CCA 90 bp GTTCAGGAGAGCAAATATCACAGGCCCGGTGAGGTCTCAAGGTGGCTGCCAGCAGCAGTCCTAACAAACTaGACAGCAGCGTTTCCGCCG +
Preference number: 4 (lower is better)
Translates to: VQESKYHRPGEVSRWLPAAVLTN*TAAFPP
Trigger: CGGCGGAAACGCTGCTGTCCAGTTTGTTAGGACTGC...TGCTGGCAGCCACCTTGAGACCTCACCGGGCCTGTGATATTTGCTCTCCTGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
CDS-3UTR CCA 90 bp GTTCAGGAGAGCAAATATCACAGGCCCGGTGAGGTCTCAAGGTGGCTGCCAGCAACCACGTCCGAAGATTaGCTCTGCCCTCCCATGACA +
Preference number: 4 (lower is better)
Translates to: VQESKYHRPGEVSRWLPATTSED*LCPPMT
Trigger: TGTCATGGGAGGGCAGAGCCAATCTTCGGACGTGGT...TGCTGGCAGCCACCTTGAGACCTCACCGGGCCTGTGATATTTGCTCTCCTGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
CDS-3UTR CCA 90 bp GTTCAGGAGAGCAAATATCACAGGCCCGGTGAGGTCTCAAGGTGGCTGCCAGCAGTGAATAGCTCCAGCTaGCAGGCGACACTCATAGCG +
Preference number: 4 (lower is better)
Translates to: VQESKYHRPGEVSRWLPAVNSSS*QATLIA
Trigger: CGCTATGAGTGTCGCCTGCCAGCTGGAGCTATTCAC...TGCTGGCAGCCACCTTGAGACCTCACCGGGCCTGTGATATTTGCTCTCCTGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
CDS-3UTR CCA 90 bp CCTCCCATTAAGGTCGCACTTGGACCCATTGCCATAGGTCTGGCTGTGGTAGCGGTGAATAGCTCCAGCTaGCAGGCGACACTCATAGCG +
Preference number: 4 (lower is better)
Translates to: PPIKVALGPIAIGLAVVAVNSSS*QATLIA
Trigger: CGCTATGAGTGTCGCCTGCCAGCTGGAGCTATTCAC...CGCTACCACAGCCAGACCTATGGCAATGGGTCCAAGTGCGACCTTAATGGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552787.5
CDS-3UTR CCA 90 bp GGAGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTGGGAGCATCTCTCATTaGGCTCAACAACTCAGGGAT +
Preference number: 4 (lower is better)
Translates to: GGGEEASQSRKSLDSVKGGSISH*AQQLRD
Trigger: ATCCCTGAGTTGTTGAGCCCAATGAGAGATGCTCCC...ACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR CCA 90 bp ATCACTAAGGGCAGGTGGGGGCCTGCTTGCTCAGTGCCTGCTAAGTGTCCTGCCGGGAGCATCTCTCATTaGGCTCAACAACTCAGGGAT +
Preference number: 4 (lower is better)
Translates to: ITKGRWGPACSVPAKCPAGSISH*AQQLRD
Trigger: ATCCCTGAGTTGTTGAGCCCAATGAGAGATGCTCCC...GGCAGGACACTTAGCAGGCACTGAGCAAGCAGGCCCCCACCTGCCCTTAGTGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
CDS-3UTR CCA 90 bp AGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCAGCTGCTTGGAGGCCTTaGCTGTTTCATCATCCCAGT +
Preference number: 4 (lower is better)
Translates to: RWGGGKPVQEESGFREGSAAWRP*LFHHPS
Trigger: ACTGGGATGATGAAACAGCCAAGGCCTCCAAGCAGC...TGACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000439210.6
ENST00000552285.5
CDS-3UTR CCA 90 bp GTTCAGGAGAGCAAATATCACAGGCCCGGTGAGGTCTCAAGGTGGCTGCCAGCAGCCGAGGAGTGCGAATaGTCAGCACATAAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: VQESKYHRPGEVSRWLPAAEECE*SAHKSR
Trigger: CCTGCTCTTATGTGCTGACCATTCGCACTCCTCGGC...TGCTGGCAGCCACCTTGAGACCTCACCGGGCCTGTGATATTTGCTCTCCTGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
CDS-3UTR CCA 90 bp CGCGATCGATGTAGTCCCCAGAGATACCTGCACCCTCGTCACAGAGGAACCGAAGTCTCACTCCACACTTaGGGGCCTAGATCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: RDRCSPQRYLHPRHRGTEVSLHT*GPRSCS
Trigger: GCTGCAAGATCTAGGCCCCCAAGTGTGGAGTGAGAC...TTCGGTTCCTCTGTGACGAGGGTGCAGGTATCTCTGGGGACTACATCGATCGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552787.5
CDS-3UTR CCA 90 bp AGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCATGGGGCCTGGTCCTCTaGCTCATTAAGCATCTTCCA +
Preference number: 4 (lower is better)
Translates to: RWGGGKPVQEESGFREGSWGLVL*LIKHLP
Trigger: TGGAAGATGCTTAATGAGCCAGAGGACCAGGCCCCA...TGACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR CCA 90 bp AGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCATCCACAGGCTGCTCTTaGCCTATATTTGGCTTCCCC +
Preference number: 4 (lower is better)
Translates to: RWGGGKPVQEESGFREGSSTGCS*PIFGFP
Trigger: GGGGAAGCCAAATATAGGCCAAGAGCAGCCTGTGGA...TGACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR CCA 90 bp AGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCACTCTCTCTGCCGTTCTaGATCACCCCTTTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: RWGGGKPVQEESGFREGSLSLPF*ITPFLL
Trigger: GAGAAGGAAAGGGGTGATCCAGAACGGCAGAGAGAG...TGACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR CCA 90 bp GGAGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTATTTTCCCTGTAGGTTaGGGTGATGGGGGAGGCTTT +
Preference number: 4 (lower is better)
Translates to: GGGEEASQSRKSLDSVKGIFPVG*GDGGGF
Trigger: AAAGCCTCCCCCATCACCCCAACCTACAGGGAAAAT...ACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000257966.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR CCA 90 bp ATCACTAAGGGCAGGTGGGGGCCTGCTTGCTCAGTGCCTGCTAAGTGTCCTGCCAGTCCCTTCAGCCCATaGGCGGACAATTTTGATCTC +
Preference number: 4 (lower is better)
Translates to: ITKGRWGPACSVPAKCPASPFSP*ADNFDL
Trigger: GAGATCAAAATTGTCCGCCCATGGGCTGAAGGGACT...GGCAGGACACTTAGCAGGCACTGAGCAAGCAGGCCCCCACCTGCCCTTAGTGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
CDS-3UTR CCA 90 bp GGAGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTAGTCCCTTCAGCCCATaGGCGGACAATTTTGATCTC +
Preference number: 4 (lower is better)
Translates to: GGGEEASQSRKSLDSVKGSPFSP*ADNFDL
Trigger: GAGATCAAAATTGTCCGCCCATGGGCTGAAGGGACT...ACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR CCA 90 bp GTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGGAGGCGCTGGCGTTCCTTCTaGGCCTCTTCAGCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: VQEHGGCFTPFSLGLCWRRWRSF*ASSAPG
Trigger: GCCGGGAGCTGAAGAGGCCCAGAAGGAACGCCAGCG...CCTCCAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CCA 90 bp GGTGATAGGCAGCATTCTACCATTTCCTCAGCAACAGAGGTGAAGGCTCCTCAACGCTGGCGTTCCTTCTaGGCCTCTTCAGCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: GDRQHSTISSATEVKAPQRWRSF*ASSAPG
Trigger: GCCGGGAGCTGAAGAGGCCCAGAAGGAACGCCAGCG...TTGAGGAGCCTTCACCTCTGTTGCTGAGGAAATGGTAGAATGCTGCCTATCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CCA 90 bp GATTGTGCTGGAGGTGATAGGCAGCATTCTACCATTTCCTCAGCAACAGAGGTGCGCTGGCGTTCCTTCTaGGCCTCTTCAGCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: DCAGGDRQHSTISSATEVRWRSF*ASSAPG
Trigger: GCCGGGAGCTGAAGAGGCCCAGAAGGAACGCCAGCG...CACCTCTGTTGCTGAGGAAATGGTAGAATGCTGCCTATCACCTCCAGCACAATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CCA 90 bp AGGGTAAAACGACTCCAAACATCACTAAGGGCAGGTGGGGGCCTGCTTGCTCAGAGCTCTTTCTGCCGCTaGCGTTCCTTCTGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: RVKRLQTSLRAGGGLLAQSSFCR*RSFWAS
Trigger: AGAGGCCCAGAAGGAACGCCAGCGGCAGAAAGAGCT...CTGAGCAAGCAGGCCCCCACCTGCCCTTAGTGATGTTTGGAGTCGTTTTACCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
ENST00000551035.5
CDS-3UTR CCA 90 bp TACCATTTCCTCAGCAACAGAGGTGAAGGCTCCTCAACTCAGAAGCACAAATTGTGTGCCCTCCCCACCTaGAGAGCCCCACACCCGGCG +
Preference number: 4 (lower is better)
Translates to: YHFLSNRGEGSSTQKHKLCALPT*RAPHPA
Trigger: CGCCGGGTGTGGGGCTCTCCAGGTGGGGAGGGCACA...CAATTTGTGCTTCTGAGTTGAGGAGCCTTCACCTCTGTTGCTGAGGAAATGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR TCA 90 bp AGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCAATCCCAGTCGAAGGCTaGTTGGTAGTAGCCGAGATA +
Preference number: 4 (lower is better)
Translates to: RWGGGKPVQEESGFREGSIPVEG*LVVAEI
Trigger: TATCTCGGCTACTACCAATCAGCCTTCGACTGGGAT...TGACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR TCA 90 bp GTTCAGGAGAGCAAATATCACAGGCCCGGTGAGGTCTCAAGGTGGCTGCCAGCATTCTCTGGTTCCCTCTaGGGGACTTCTGCAGCATCA +
Preference number: 4 (lower is better)
Translates to: VQESKYHRPGEVSRWLPAFSGSL*GTSAAS
Trigger: TGATGCTGCAGAAGTCCCTCAGAGGGAACCAGAGAA...TGCTGGCAGCCACCTTGAGACCTCACCGGGCCTGTGATATTTGCTCTCCTGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
CDS-3UTR TCA 90 bp GATTGTGCTGGAGGTGATAGGCAGCATTCTACCATTTCCTCAGCAACAGAGGTGGAGCCGGTCTCGGTCTaGCGGAAGCAGGATCCCTTC +
Preference number: 4 (lower is better)
Translates to: DCAGGDRQHSTISSATEVEPVSV*RKQDPF
Trigger: GAAGGGATCCTGCTTCCGTCAGACCGAGACCGGCTC...CACCTCTGTTGCTGAGGAAATGGTAGAATGCTGCCTATCACCTCCAGCACAATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR TCA 90 bp AGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCATCTCTGTCTCCTGGATaGTGTTTTCCAGTTCCCGCT +
Preference number: 4 (lower is better)
Translates to: RWGGGKPVQEESGFREGSSLSPG*CFPVPA
Trigger: AGCGGGAACTGGAAAACATCATCCAGGAGACAGAGA...TGACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR TCA 90 bp ATCACTAAGGGCAGGTGGGGGCCTGCTTGCTCAGTGCCTGCTAAGTGTCCTGCCAGAGTCTGGATTCCGTaGAGGGTCAAGTGTAGTGTT +
Preference number: 4 (lower is better)
Translates to: ITKGRWGPACSVPAKCPARVWIP*RVKCSV
Trigger: AACACTACACTTGACCCTTCACGGAATCCAGACTCT...GGCAGGACACTTAGCAGGCACTGAGCAAGCAGGCCCCCACCTGCCCTTAGTGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
CDS-3UTR TCA 90 bp GGAGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTAGAGTCTGGATTCCGTaGAGGGTCAAGTGTAGTGTT +
Preference number: 4 (lower is better)
Translates to: GGGEEASQSRKSLDSVKGRVWIP*RVKCSV
Trigger: AACACTACACTTGACCCTTCACGGAATCCAGACTCT...ACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR TCA 90 bp GCAGGACAAGGGCTCGTCCACGCGATCGATGTAGTCCCCAGAGATACCTGCACCCTGCTTGGAGGCCTTTaGTCTCTGAATCTTCCATGT +
Preference number: 4 (lower is better)
Translates to: AGQGLVHAIDVVPRDTCTLLGGL*SLNLPC
Trigger: ACATGGAAGATTCAGAGATCAAAGGCCTCCAAGCAG...GGTGCAGGTATCTCTGGGGACTACATCGATCGCGTGGACGAGCCCTTGTCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552787.5
CDS-3UTR GCA 90 bp AGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCACGTTTAAGACGATGCTaGTTGGAGGCCTTGGCTGTT +
Preference number: 4 (lower is better)
Translates to: RWGGGKPVQEESGFREGSRLRRC*LEALAV
Trigger: AACAGCCAAGGCCTCCAAGCAGCATCGTCTTAAACG...TGACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000439210.6
ENST00000552285.5
CDS-3UTR GCA 90 bp AGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCAGCATCATCCACAGGCTaGTCTTGGCCTATATTTGGC +
Preference number: 4 (lower is better)
Translates to: RWGGGKPVQEESGFREGSASSTG*SWPIFG
Trigger: GCCAAATATAGGCCAAGAGCAGCCTGTGGATGATGC...TGACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR GCA 90 bp AGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCATCTTCCATCTCTCTCTaGCGTTCTGGATCACCCCTT +
Preference number: 4 (lower is better)
Translates to: RWGGGKPVQEESGFREGSSSISL*RSGSPL
Trigger: AAGGGGTGATCCAGAACGGCAGAGAGAGATGGAAGA...TGACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR GCA 90 bp GTTCAGGAGAGCAAATATCACAGGCCCGGTGAGGTCTCAAGGTGGCTGCCAGCAATCAGTCAGCCAACGTaGACCCTCTTCAGTCCCTTC +
Preference number: 4 (lower is better)
Translates to: VQESKYHRPGEVSRWLPAISQPT*TLFSPF
Trigger: GAAGGGACTGAAGAGGGTGCACGTTGGCTGACTGAT...TGCTGGCAGCCACCTTGAGACCTCACCGGGCCTGTGATATTTGCTCTCCTGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
CDS-3UTR GCA 90 bp CTGATTGTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCCGTCCAGGTCCCCTGTaGCCTCCCCACCTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: LIVQEHGGCFTPFSLGLCRPGPL*PPHLES
Trigger: GCTCTCCAGGTGGGGAGGGCACAGGGGACCTGGACG...GCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACAATCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR GCA 90 bp AAGGCTCCTCAACTCAGAAGCACAAATTGTAGGGGACAGGGTGGGCAGGGAAAGGTGTCCTGCCCTCCTTaGTCTCTCTACCCACCTCCA +
Preference number: 4 (lower is better)
Translates to: KAPQLRSTNCRGQGGQGKVSCPP*SLYPPP
Trigger: TGGAGGTGGGTAGAGAGAGCAAGGAGGGCAGGACAC...CTTTCCCTGCCCACCCTGTCCCCTACAATTTGTGCTTCTGAGTTGAGGAGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR GCA 90 bp AGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCAGATCTCAATTTTCCCTaGAGCTGTGAGTCCCTCCCT +
Preference number: 4 (lower is better)
Translates to: RWGGGKPVQEESGFREGSDLNFP*SCESLP
Trigger: AGGGAGGGACTCACAGCTGCAGGGAAAATTGAGATC...TGACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315970.12
ENST00000389146.10
CDS-3UTR CCA 90 bp AGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCAGGGAGCATCTCTCATTaGGCTCAACAACTCAGGGAT +
Preference number: 4 (lower is better)
Translates to: RWGGGKPVQEESGFREGSGSISH*AQQLRD
Trigger: ATCCCTGAGTTGTTGAGCCCAATGAGAGATGCTCCC...TGACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR CCA 90 bp CAGCAAGCAGGGAGCATCTCTCATTGGGCTCAACAACTCAGGGATCCCAGGCCCGGGAGCATCTCTCATTaGGCTCAACAACTCAGGGAT +
Preference number: 4 (lower is better)
Translates to: QQAGSISHWAQQLRDPRPGSISH*AQQLRD
Trigger: ATCCCTGAGTTGTTGAGCCCAATGAGAGATGCTCCC...GGGCCTGGGATCCCTGAGTTGTTGAGCCCAATGAGAGATGCTCCCTGCTTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000550848.5
ENST00000551285.5
CDS-3UTR CCA 90 bp GTTCAGGAGAGCAAATATCACAGGCCCGGTGAGGTCTCAAGGTGGCTGCCAGCAGCTGCTTGGAGGCCTTaGCTGTTTCATCATCCCAGT +
Preference number: 4 (lower is better)
Translates to: VQESKYHRPGEVSRWLPAAAWRP*LFHHPS
Trigger: ACTGGGATGATGAAACAGCCAAGGCCTCCAAGCAGC...TGCTGGCAGCCACCTTGAGACCTCACCGGGCCTGTGATATTTGCTCTCCTGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000439210.6
CDS-3UTR CCA 90 bp AGGGTAAAACGACTCCAAACATCACTAAGGGCAGGTGGGGGCCTGCTTGCTCAGGCCGAGGAGTGCGAATaGTCAGCACATAAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: RVKRLQTSLRAGGGLLAQAEECE*SAHKSR
Trigger: CCTGCTCTTATGTGCTGACCATTCGCACTCCTCGGC...CTGAGCAAGCAGGCCCCCACCTGCCCTTAGTGATGTTTGGAGTCGTTTTACCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
ENST00000551035.5
CDS-3UTR CCA 90 bp AGGGTAAAACGACTCCAAACATCACTAAGGGCAGGTGGGGGCCTGCTTGCTCAGGTCTCACTCCACACTTaGGGGCCTAGATCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: RVKRLQTSLRAGGGLLAQVSLHT*GPRSCS
Trigger: GCTGCAAGATCTAGGCCCCCAAGTGTGGAGTGAGAC...CTGAGCAAGCAGGCCCCCACCTGCCCTTAGTGATGTTTGGAGTCGTTTTACCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
ENST00000551035.5
CDS-3UTR CCA 90 bp AAGGCTCCTCAACTCAGAAGCACAAATTGTAGGGGACAGGGTGGGCAGGGAAAGGCACCTGCCATCTTTTaGGGTGCCACCCCAGACTTG +
Preference number: 4 (lower is better)
Translates to: KAPQLRSTNCRGQGGQGKAPAIF*GATPDL
Trigger: CAAGTCTGGGGTGGCACCCCAAAAGATGGCAGGTGC...CTTTCCCTGCCCACCCTGTCCCCTACAATTTGTGCTTCTGAGTTGAGGAGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CCA 90 bp ACAGAGGTGAAGGCTCCTCAACTCAGAAGCACAAATTGTAGGGGACAGGGTGGGCCTTACTGTCATCCTTaGTCGGGCTCGCACCTGCCA +
Preference number: 4 (lower is better)
Translates to: TEVKAPQLRSTNCRGQGGPYCHP*SGSHLP
Trigger: TGGCAGGTGCGAGCCCGACCAAGGATGACAGTAAGG...CCCACCCTGTCCCCTACAATTTGTGCTTCTGAGTTGAGGAGCCTTCACCTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CCA 90 bp GGCAGGTGGGGGCCTGCTTGCTCAGTGCCTGCTAAGTGTCCTGCCCTCCTTGCTTCTTTCTCTGTCTCCTaGATGATGTTTTCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: GRWGPACSVPAKCPALLASFSVS*MMFSSS
Trigger: GGAACTGGAAAACATCATCCAGGAGACAGAGAAAGA...AGCAAGGAGGGCAGGACACTTAGCAGGCACTGAGCAAGCAGGCCCCCACCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
CDS-3UTR CCA 90 bp AGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCAAGTCCCTTCAGCCCATaGGCGGACAATTTTGATCTC +
Preference number: 4 (lower is better)
Translates to: RWGGGKPVQEESGFREGSSPFSP*ADNFDL
Trigger: GAGATCAAAATTGTCCGCCCATGGGCTGAAGGGACT...TGACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR CCA 90 bp AAGGCTCCTCAACTCAGAAGCACAAATTGTAGGGGACAGGGTGGGCAGGGAAAGATCACTAAGGGCAGGTaGGGGCCTGCTTGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: KAPQLRSTNCRGQGGQGKITKGR*GPACSV
Trigger: CACTGAGCAAGCAGGCCCCCACCTGCCCTTAGTGAT...CTTTCCCTGCCCACCCTGTCCCCTACAATTTGTGCTTCTGAGTTGAGGAGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CCA 90 bp GGCAGGTGGGGGCCTGCTTGCTCAGTGCCTGCTAAGTGTCCTGCCCTCCTTGCTGATTGTTCAAGAACATaGTGGGTGCTTCACACCTTT +
Preference number: 4 (lower is better)
Translates to: GRWGPACSVPAKCPALLADCSRT*WVLHTF
Trigger: AAAGGTGTGAAGCACCCACCATGTTCTTGAACAATC...AGCAAGGAGGGCAGGACACTTAGCAGGCACTGAGCAAGCAGGCCCCCACCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CCA 90 bp ATCACTAAGGGCAGGTGGGGGCCTGCTTGCTCAGTGCCTGCTAAGTGTCCTGCCGCTGAATCTTCCATGTaGTATTGCTGGATGTGGCGT +
Preference number: 4 (lower is better)
Translates to: ITKGRWGPACSVPAKCPAAESSM*YCWMWR
Trigger: ACGCCACATCCAGCAATACCACATGGAAGATTCAGC...GGCAGGACACTTAGCAGGCACTGAGCAAGCAGGCCCCCACCTGCCCTTAGTGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413095.6
CDS-3UTR CCA 90 bp GGAGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTAAGGTCCTGGGGAGGTaGATCACGACGATTAGAAAT +
Preference number: 4 (lower is better)
Translates to: GGGEEASQSRKSLDSVKGKVLGR*ITTIRN
Trigger: ATTTCTAATCGTCGTGATCCACCTCCCCAGGACCTT...ACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552285.5
3UTR CAA 72 bp TCTCATTGGGCTCAACAACTCAGGGATCCCAGGCCCTaGGTAAGCAGGTGTTTCCTCCTCCCTTTCACGCTG +
Preference number: 4 (lower is better)
Translates to: SHWAQQLRDPRP*VSRCFLLPFTL
Trigger: CAGCGTGAAAGGGAGGAGGAAACACCTGCTTACCAAGGGCCTGGGATCCCTGAGTTGTTGAGCCCAATGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000550848.5
ENST00000551285.5
CDS-3UTR TCA 90 bp AAGGCTCCTCAACTCAGAAGCACAAATTGTAGGGGACAGGGTGGGCAGGGAAAGCTTTCACGCTGGAAGTaGATAGCTCCAGCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: KAPQLRSTNCRGQGGQGKLSRWK*IAPAGR
Trigger: CCTGCCAGCTGGAGCTATTCACTTCCAGCGTGAAAG...CTTTCCCTGCCCACCCTGTCCCCTACAATTTGTGCTTCTGAGTTGAGGAGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR TCA 90 bp TCTTCAGCAAGCAGGGAGCATCTCTCATTGGGCTCAACAACTCAGGGATCCCAGCTTTCACGCTGGAAGTaGATAGCTCCAGCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: SSASREHLSLGSTTQGSQLSRWK*IAPAGR
Trigger: CCTGCCAGCTGGAGCTATTCACTTCCAGCGTGAAAG...CTGGGATCCCTGAGTTGTTGAGCCCAATGAGAGATGCTCCCTGCTTGCTGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000550848.5
ENST00000551285.5
CDS-3UTR TCA 90 bp GGCAGGTGGGGGCCTGCTTGCTCAGTGCCTGCTAAGTGTCCTGCCCTCCTTGCTTTCACCTTTGATCTCTaGATCTTCCATGTGGTATTG +
Preference number: 4 (lower is better)
Translates to: GRWGPACSVPAKCPALLAFTFDL*IFHVVL
Trigger: CAATACCACATGGAAGATTCAGAGATCAAAGGTGAA...AGCAAGGAGGGCAGGACACTTAGCAGGCACTGAGCAAGCAGGCCCCCACCTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
ENST00000551035.5
CDS-3UTR TCA 90 bp GGAGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCTTTCAGCTCCTCTATaGATCGAATCAAATCCGCAG +
Preference number: 4 (lower is better)
Translates to: GGGEEASQSRKSLDSVKGLSAPL*IESNPQ
Trigger: CTGCGGATTTGATTCGATTCATAGAGGAGCTGAAAG...ACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR TCA 90 bp ATCACTAAGGGCAGGTGGGGGCCTGCTTGCTCAGTGCCTGCTAAGTGTCCTGCCCTTTCAGCTCCTCTATaGATCGAATCAAATCCGCAG +
Preference number: 4 (lower is better)
Translates to: ITKGRWGPACSVPAKCPALSAPL*IESNPQ
Trigger: CTGCGGATTTGATTCGATTCATAGAGGAGCTGAAAG...GGCAGGACACTTAGCAGGCACTGAGCAAGCAGGCCCCCACCTGCCCTTAGTGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
CDS-3UTR TCA 90 bp GTTCAGGAGAGCAAATATCACAGGCCCGGTGAGGTCTCAAGGTGGCTGCCAGCATCTCTGTCTCCTGGATaGTGTTTTCCAGTTCCCGCT +
Preference number: 4 (lower is better)
Translates to: VQESKYHRPGEVSRWLPASLSPG*CFPVPA
Trigger: AGCGGGAACTGGAAAACATCATCCAGGAGACAGAGA...TGCTGGCAGCCACCTTGAGACCTCACCGGGCCTGTGATATTTGCTCTCCTGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
CDS-3UTR TCA 90 bp AGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCAAGAGTCTGGATTCCGTaGAGGGTCAAGTGTAGTGTT +
Preference number: 4 (lower is better)
Translates to: RWGGGKPVQEESGFREGSRVWIP*RVKCSV
Trigger: AACACTACACTTGACCCTTCACGGAATCCAGACTCT...TGACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR TCA 90 bp GATTGTGCTGGAGGTGATAGGCAGCATTCTACCATTTCCTCAGCAACAGAGGTGATATCACAGGCCCGGTaGGGTCTCAAGGTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: DCAGGDRQHSTISSATEVISQAR*GLKVAA
Trigger: GGCAGCCACCTTGAGACCTCACCGGGCCTGTGATAT...CACCTCTGTTGCTGAGGAAATGGTAGAATGCTGCCTATCACCTCCAGCACAATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR TCA 90 bp AGGGTAAAACGACTCCAAACATCACTAAGGGCAGGTGGGGGCCTGCTTGCTCAGCCTCAGCAACAGAGGTaGAGGCTCCTCAACTCAGAA +
Preference number: 4 (lower is better)
Translates to: RVKRLQTSLRAGGGLLAQPQQQR*RLLNSE
Trigger: TTCTGAGTTGAGGAGCCTTCACCTCTGTTGCTGAGG...CTGAGCAAGCAGGCCCCCACCTGCCCTTAGTGATGTTTGGAGTCGTTTTACCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR TCA 90 bp TTTGTCTTCAGCAAGCAGGGAGCATCTCTCATTGGGCTCAACAACTCAGGGATCAAGGCTGCCCTCCCATaGCAGGCAACGGCAGGATCT +
Preference number: 4 (lower is better)
Translates to: FVFSKQGASLIGLNNSGIKAALP*QATAGS
Trigger: AGATCCTGCCGTTGCCTGTCATGGGAGGGCAGCCTT...GATCCCTGAGTTGTTGAGCCCAATGAGAGATGCTCCCTGCTTGCTGAAGACAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000550848.5
ENST00000551285.5
CDS-3UTR TCA 90 bp GGGGCAGAGCCGAGGAGTGCGAATGGTCAGCACATAAGAGCAGGACAAGGGCTCGAGGCCTTTGATCTCTaGATCTTCCATGTGGTATTG +
Preference number: 4 (lower is better)
Translates to: GAEPRSANGQHIRAGQGLEAFDL*IFHVVL
Trigger: CAATACCACATGGAAGATTCAGAGATCAAAGGCCTC...GAGCCCTTGTCCTGCTCTTATGTGCTGACCATTCGCACTCCTCGGCTCTGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552787.5
CDS-3UTR GCA 90 bp AAGGCTCCTCAACTCAGAAGCACAAATTGTAGGGGACAGGGTGGGCAGGGAAAGGTCCCCAGAGATACCTaGACCCTCGTCACAGAGGAA +
Preference number: 4 (lower is better)
Translates to: KAPQLRSTNCRGQGGQGKVPRDT*TLVTEE
Trigger: TTCCTCTGTGACGAGGGTGCAGGTATCTCTGGGGAC...CTTTCCCTGCCCACCCTGTCCCCTACAATTTGTGCTTCTGAGTTGAGGAGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR GCA 90 bp GGAGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTTGGGGGCCTAGATCTTaGAGCTCCTCTATGATTTTA +
Preference number: 4 (lower is better)
Translates to: GGGEEASQSRKSLDSVKGWGPRS*SSSMIL
Trigger: TAAAATCATAGAGGAGCTGCAAGATCTAGGCCCCCA...ACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR GCA 90 bp AGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGGAGGTGATAGGTCGGGCTCGCACCTaGCATCTTTTGGGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: RTWWVLHTFFTGIVLEVIGRART*HLLGCH
Trigger: GTGGCACCCCAAAAGATGGCAGGTGCGAGCCCGACC...TATCACCTCCAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR GCA 90 bp GTTCAGGAGAGCAAATATCACAGGCCCGGTGAGGTCTCAAGGTGGCTGCCAGCAGCATCATCCACAGGCTaGTCTTGGCCTATATTTGGC +
Preference number: 4 (lower is better)
Translates to: VQESKYHRPGEVSRWLPAASSTG*SWPIFG
Trigger: GCCAAATATAGGCCAAGAGCAGCCTGTGGATGATGC...TGCTGGCAGCCACCTTGAGACCTCACCGGGCCTGTGATATTTGCTCTCCTGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
CDS-3UTR GCA 90 bp TCAATAGAAGAGGGTAAAACGACTCCAAACATCACTAAGGGCAGGTGGGGGCCTCCAGTTCCCGCTCCATaGCAGCCTTCACCTCCGAAC +
Preference number: 4 (lower is better)
Translates to: SIEEGKTTPNITKGRWGPPVPAP*QPSPPN
Trigger: GTTCGGAGGTGAAGGCTGGCATGGAGCGGGAACTGG...AGGCCCCCACCTGCCCTTAGTGATGTTTGGAGTCGTTTTACCCTCTTCTATTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000435406.6
ENST00000551035.5
CDS-3UTR GCA 90 bp TCCCAAGGCAATTCAATAGAAGAGGGTAAAACGACTCCAAACATCACTAAGGGCCGTCCAGGTCCCCTGTaGCCTCCCCACCTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: SQGNSIEEGKTTPNITKGRPGPL*PPHLES
Trigger: GCTCTCCAGGTGGGGAGGGCACAGGGGACCTGGACG...GCCCTTAGTGATGTTTGGAGTCGTTTTACCCTCTTCTATTGAATTGCCTTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
ENST00000551035.5
CDS-3UTR GCA 90 bp GTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGGAGGCCACACCCACAGAGTTaGCCGAGAGGTCCACAGCTC +
Preference number: 4 (lower is better)
Translates to: VQEHGGCFTPFSLGLCWRPHPQS*PRGPQL
Trigger: GAGCTGTGGACCTCTCGGGCAACTCTGTGGGTGTGG...CCTCCAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR GCA 90 bp AGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCATCGTTCCCCTTCTTATaGAGAGAATCTGTTTCCGCC +
Preference number: 4 (lower is better)
Translates to: RWGGGKPVQEESGFREGSSFPFL*RESVSA
Trigger: GGCGGAAACAGATTCTCTGCATAAGAAGGGGAACGA...TGACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552285.5
CDS-3UTR CCA 90 bp TCTCATTGGGCTCAACAACTCAGGGATCCCAGGCCCTTGGTAAGCAGGTGTTTCGTGAATAGCTCCAGCTaGCAGGCGACACTCATAGCG +
Preference number: 4 (lower is better)
Translates to: SHWAQQLRDPRPLVSRCFVNSSS*QATLIA
Trigger: CGCTATGAGTGTCGCCTGCCAGCTGGAGCTATTCAC...GAAACACCTGCTTACCAAGGGCCTGGGATCCCTGAGTTGTTGAGCCCAATGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000550848.5
ENST00000551285.5
CDS-3UTR CCA 90 bp AGGCCCTTGGTAAGCAGGTGTTTCCTCCTCCCTTTCACGCTGGAAGTGAATAGCGTGAATAGCTCCAGCTaGCAGGCGACACTCATAGCG +
Preference number: 4 (lower is better)
Translates to: RPLVSRCFLLPFTLEVNSVNSSS*QATLIA
Trigger: CGCTATGAGTGTCGCCTGCCAGCTGGAGCTATTCAC...GCTATTCACTTCCAGCGTGAAAGGGAGGAGGAAACACCTGCTTACCAAGGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000550848.5
ENST00000551285.5
CDS-3UTR CCA 90 bp GTTCAGGAGAGCAAATATCACAGGCCCGGTGAGGTCTCAAGGTGGCTGCCAGCAGGGAGCATCTCTCATTaGGCTCAACAACTCAGGGAT +
Preference number: 4 (lower is better)
Translates to: VQESKYHRPGEVSRWLPAGSISH*AQQLRD
Trigger: ATCCCTGAGTTGTTGAGCCCAATGAGAGATGCTCCC...TGCTGGCAGCCACCTTGAGACCTCACCGGGCCTGTGATATTTGCTCTCCTGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
CDS-3UTR CCA 90 bp GGAGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTTCTGAATCTTCCATGTaGTATTGCTGGATGTGGCGT +
Preference number: 4 (lower is better)
Translates to: GGGEEASQSRKSLDSVKGSESSM*YCWMWR
Trigger: ACGCCACATCCAGCAATACCACATGGAAGATTCAGA...ACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR CCA 90 bp ATCACTAAGGGCAGGTGGGGGCCTGCTTGCTCAGTGCCTGCTAAGTGTCCTGCCTCTGAATCTTCCATGTaGTATTGCTGGATGTGGCGT +
Preference number: 4 (lower is better)
Translates to: ITKGRWGPACSVPAKCPASESSM*YCWMWR
Trigger: ACGCCACATCCAGCAATACCACATGGAAGATTCAGA...GGCAGGACACTTAGCAGGCACTGAGCAAGCAGGCCCCCACCTGCCCTTAGTGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
ENST00000551035.5
CDS-3UTR CCA 90 bp TCAATAGAAGAGGGTAAAACGACTCCAAACATCACTAAGGGCAGGTGGGGGCCTAAGGGTGACAGAGGATaGCCTGCGGTGCAGCACTGG +
Preference number: 4 (lower is better)
Translates to: SIEEGKTTPNITKGRWGPKGDRG*PAVQHW
Trigger: CCAGTGCTGCACCGCAGGCCATCCTCTGTCACCCTT...AGGCCCCCACCTGCCCTTAGTGATGTTTGGAGTCGTTTTACCCTCTTCTATTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
ENST00000551035.5
CDS-3UTR CCA 90 bp GGCAGGTGGGGGCCTGCTTGCTCAGTGCCTGCTAAGTGTCCTGCCCTCCTTGCTTGTTCTGAAAATCATTaGGAGCACCAGAAGCTGAAT +
Preference number: 4 (lower is better)
Translates to: GRWGPACSVPAKCPALLACSENH*EHQKLN
Trigger: ATTCAGCTTCTGGTGCTCCCAATGATTTTCAGAACA...AGCAAGGAGGGCAGGACACTTAGCAGGCACTGAGCAAGCAGGCCCCCACCTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
CDS-3UTR CCA 90 bp GTTCAGGAGAGCAAATATCACAGGCCCGGTGAGGTCTCAAGGTGGCTGCCAGCAATTTTCCCTGTAGGTTaGGGTGATGGGGGAGGCTTT +
Preference number: 4 (lower is better)
Translates to: VQESKYHRPGEVSRWLPAIFPVG*GDGGGF
Trigger: AAAGCCTCCCCCATCACCCCAACCTACAGGGAAAAT...TGCTGGCAGCCACCTTGAGACCTCACCGGGCCTGTGATATTTGCTCTCCTGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
CDS-3UTR CCA 90 bp GTTCAGGAGAGCAAATATCACAGGCCCGGTGAGGTCTCAAGGTGGCTGCCAGCAAGTCCCTTCAGCCCATaGGCGGACAATTTTGATCTC +
Preference number: 4 (lower is better)
Translates to: VQESKYHRPGEVSRWLPASPFSP*ADNFDL
Trigger: GAGATCAAAATTGTCCGCCCATGGGCTGAAGGGACT...TGCTGGCAGCCACCTTGAGACCTCACCGGGCCTGTGATATTTGCTCTCCTGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
CDS-3UTR CCA 90 bp GAGCATCTCTCATTGGGCTCAACAACTCAGGGATCCCAGGCCCTTGGTAAGCAGACCACGTCCGAAGATTaGCTCTGGGAAAGAAGGGAG +
Preference number: 4 (lower is better)
Translates to: EHLSLGSTTQGSQALGKQTTSED*LWERRE
Trigger: CTCCCTTCTTTCCCAGAGCCAATCTTCGGACGTGGT...CTGCTTACCAAGGGCCTGGGATCCCTGAGTTGTTGAGCCCAATGAGAGATGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000550848.5
ENST00000551285.5
3UTR CAA 72 bp AGTCCTTTGTCTTCAGCAAGCAGGGAGCATCTCTCATaGGGCTCAACAACTCAGGGATCCCAGGCCCTTGGT +
Preference number: 4 (lower is better)
Translates to: SPLSSASREHLS*GSTTQGSQALG
Trigger: ACCAAGGGCCTGGGATCCCTGAGTTGTTGAGCCCAATGAGAGATGCTCCCTGCTTGCTGAAGACAAAGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000550848.5
ENST00000551285.5
CDS-3UTR TCA 90 bp GATTGTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGGGCTCTGCCCTCCCATaGCAGGCAACGGCAGGATCT +
Preference number: 4 (lower is better)
Translates to: DCSRTWWVLHTFFTGIVLGSALP*QATAGS
Trigger: AGATCCTGCCGTTGCCTGTCATGGGAGGGCAGAGCC...CAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR TCA 90 bp TTGTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGGAGGCTCTGCCCTCCCATaGCAGGCAACGGCAGGATCT +
Preference number: 4 (lower is better)
Translates to: LFKNMVGASHLFHWDCAGGSALP*QATAGS
Trigger: AGATCCTGCCGTTGCCTGTCATGGGAGGGCAGAGCC...TCCAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR TCA 90 bp GGAGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTAGAGGACTTCACCTTTaGTCTCTGAATCTTCCATGT +
Preference number: 4 (lower is better)
Translates to: GGGEEASQSRKSLDSVKGRGLHL*SLNLPC
Trigger: ACATGGAAGATTCAGAGATCAAAGGTGAAGTCCTCT...ACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR TCA 90 bp CCCAGGCCCTTGGTAAGCAGGTGTTTCCTCCTCCCTTTCACGCTGGAAGTGAATATCCCAGTCGAAGGCTaGTTGGTAGTAGCCGAGATA +
Preference number: 4 (lower is better)
Translates to: PRPLVSRCFLLPFTLEVNIPVEG*LVVAEI
Trigger: TATCTCGGCTACTACCAATCAGCCTTCGACTGGGAT...ATTCACTTCCAGCGTGAAAGGGAGGAGGAAACACCTGCTTACCAAGGGCCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000550848.5
ENST00000551285.5
CDS-3UTR TCA 90 bp GAGCATCTCTCATTGGGCTCAACAACTCAGGGATCCCAGGCCCTTGGTAAGCAGATCCCAGTCGAAGGCTaGTTGGTAGTAGCCGAGATA +
Preference number: 4 (lower is better)
Translates to: EHLSLGSTTQGSQALGKQIPVEG*LVVAEI
Trigger: TATCTCGGCTACTACCAATCAGCCTTCGACTGGGAT...CTGCTTACCAAGGGCCTGGGATCCCTGAGTTGTTGAGCCCAATGAGAGATGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000550848.5
ENST00000551285.5
CDS-3UTR TCA 90 bp GGAGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCTTGCAGCTCCTCTATaGTTTTATCTCCATACTGCT +
Preference number: 4 (lower is better)
Translates to: GGGEEASQSRKSLDSVKGLAAPL*FYLHTA
Trigger: AGCAGTATGGAGATAAAATCATAGAGGAGCTGCAAG...ACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR TCA 90 bp AGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGGAGGTGATAGGGAGCACCAGAAGCTaGATCTGCTGCCTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: RTWWVLHTFFTGIVLEVIGSTRS*ICCLRA
Trigger: AGCCCTGAGGCAGCAGATTCAGCTTCTGGTGCTCCC...TATCACCTCCAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR TCA 90 bp AAGGCTCCTCAACTCAGAAGCACAAATTGTAGGGGACAGGGTGGGCAGGGAAAGTTCTCTGGTTCCCTCTaGGGGACTTCTGCAGCATCA +
Preference number: 4 (lower is better)
Translates to: KAPQLRSTNCRGQGGQGKFSGSL*GTSAAS
Trigger: TGATGCTGCAGAAGTCCCTCAGAGGGAACCAGAGAA...CTTTCCCTGCCCACCCTGTCCCCTACAATTTGTGCTTCTGAGTTGAGGAGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR TCA 90 bp CTGATTGTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCGAGCCGGTCTCGGTCTaGCGGAAGCAGGATCCCTTC +
Preference number: 4 (lower is better)
Translates to: LIVQEHGGCFTPFSLGLCEPVSV*RKQDPF
Trigger: GAAGGGATCCTGCTTCCGTCAGACCGAGACCGGCTC...GCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACAATCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR TCA 90 bp AGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCAAGGAAGAGGATTGAGTaGGAGTTCAGGAGAGCAAAT +
Preference number: 4 (lower is better)
Translates to: RWGGGKPVQEESGFREGSRKRIE*EFRRAN
Trigger: ATTTGCTCTCCTGAACTCTCACTCAATCCTCTTCCT...TGACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
CDS-3UTR TCA 90 bp ACAGAGGTGAAGGCTCCTCAACTCAGAAGCACAAATTGTAGGGGACAGGGTGGGGGAGAGGAAGAGGATTaGGTGAGAGTTCAGGAGAGC +
Preference number: 4 (lower is better)
Translates to: TEVKAPQLRSTNCRGQGGGEEED*VRVQES
Trigger: GCTCTCCTGAACTCTCACTCAATCCTCTTCCTCTCC...CCCACCCTGTCCCCTACAATTTGTGCTTCTGAGTTGAGGAGCCTTCACCTCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR TCA 90 bp AAGGCTCCTCAACTCAGAAGCACAAATTGTAGGGGACAGGGTGGGCAGGGAAAGGGAGAGGAAGAGGATTaGGTGAGAGTTCAGGAGAGC +
Preference number: 4 (lower is better)
Translates to: KAPQLRSTNCRGQGGQGKGEEED*VRVQES
Trigger: GCTCTCCTGAACTCTCACTCAATCCTCTTCCTCTCC...CTTTCCCTGCCCACCCTGTCCCCTACAATTTGTGCTTCTGAGTTGAGGAGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR TCA 90 bp GGTGATAGGCAGCATTCTACCATTTCCTCAGCAACAGAGGTGAAGGCTCCTCAAAGGACAGTCAGATCCTaGTTAGGGCCTCCGAGACGG +
Preference number: 4 (lower is better)
Translates to: GDRQHSTISSATEVKAPQRTVRS*LGPPRR
Trigger: CCGTCTCGGAGGCCCTAATCAGGATCTGACTGTCCT...TTGAGGAGCCTTCACCTCTGTTGCTGAGGAAATGGTAGAATGCTGCCTATCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315970.12
CDS-3UTR GCA 90 bp AGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCATGGGGGCCTAGATCTTaGAGCTCCTCTATGATTTTA +
Preference number: 4 (lower is better)
Translates to: RWGGGKPVQEESGFREGSWGPRS*SSSMIL
Trigger: TAAAATCATAGAGGAGCTGCAAGATCTAGGCCCCCA...TGACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR GCA 90 bp GATTGTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGGGTCGGGCTCGCACCTaGCATCTTTTGGGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: DCSRTWWVLHTFFTGIVLGRART*HLLGCH
Trigger: GTGGCACCCCAAAAGATGGCAGGTGCGAGCCCGACC...CAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR GCA 90 bp TTGTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGGAGGTCGGGCTCGCACCTaGCATCTTTTGGGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: LFKNMVGASHLFHWDCAGGRART*HLLGCH
Trigger: GTGGCACCCCAAAAGATGGCAGGTGCGAGCCCGACC...TCCAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR GCA 90 bp AGGGTAAAACGACTCCAAACATCACTAAGGGCAGGTGGGGGCCTGCTTGCTCAGTCTTCCATCTCTCTCTaGCGTTCTGGATCACCCCTT +
Preference number: 4 (lower is better)
Translates to: RVKRLQTSLRAGGGLLAQSSISL*RSGSPL
Trigger: AAGGGGTGATCCAGAACGGCAGAGAGAGATGGAAGA...CTGAGCAAGCAGGCCCCCACCTGCCCTTAGTGATGTTTGGAGTCGTTTTACCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
ENST00000551035.5
CDS-3UTR GCA 90 bp GGAGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTAATTCTCCCAGTAACTaGCGTTCATCCTCATCTTCA +
Preference number: 4 (lower is better)
Translates to: GGGEEASQSRKSLDSVKGNSPSN*RSSSSS
Trigger: TGAAGATGAGGATGAACGGCAGTTACTGGGAGAATT...ACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR GCA 90 bp TGTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGGAGCCACACCCACAGAGTTaGCCGAGAGGTCCACAGCTC +
Preference number: 4 (lower is better)
Translates to: CSRTWWVLHTFFTGIVLEPHPQS*PRGPQL
Trigger: GAGCTGTGGACCTCTCGGGCAACTCTGTGGGTGTGG...CTCCAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR GCA 90 bp GATTGTGCTGGAGGTGATAGGCAGCATTCTACCATTTCCTCAGCAACAGAGGTGAGGTGGGGGCCTGCTTaGTCAGTGCCTGCTAAGTGT +
Preference number: 4 (lower is better)
Translates to: DCAGGDRQHSTISSATEVRWGPA*SVPAKC
Trigger: ACACTTAGCAGGCACTGAGCAAGCAGGCCCCCACCT...CACCTCTGTTGCTGAGGAAATGGTAGAATGCTGCCTATCACCTCCAGCACAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR GCA 90 bp AGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCACAAGAACATGGTGGGTaGTTCACACCTTTTTCACTG +
Preference number: 4 (lower is better)
Translates to: RWGGGKPVQEESGFREGSQEHGG*FTPFSL
Trigger: CAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTG...TGACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR GCA 90 bp GGAGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTATTTTATCTCCATACTaGTTTGAGTCGGCTTGCCTC +
Preference number: 4 (lower is better)
Translates to: GGGEEASQSRKSLDSVKGILSPY*FESACL
Trigger: GAGGCAAGCCGACTCAAAGCAGTATGGAGATAAAAT...ACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000435406.6
ENST00000439210.6
ENST00000552285.5
CDS-3UTR GCA 90 bp GATTGTGCTGGAGGTGATAGGCAGCATTCTACCATTTCCTCAGCAACAGAGGTGCGGACCCGGACTCTGTaGTCAGGATCCTCCTCTGTA +
Preference number: 4 (lower is better)
Translates to: DCAGGDRQHSTISSATEVRTRTL*SGSSSV
Trigger: TACAGAGGAGGATCCTGAGCACAGAGTCCGGGTCCG...CACCTCTGTTGCTGAGGAAATGGTAGAATGCTGCCTATCACCTCCAGCACAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315970.12
CDS-3UTR CCA 90 bp GGTGATAGGCAGCATTCTACCATTTCCTCAGCAACAGAGGTGAAGGCTCCTCAAGTGCCACCCCAGACTTaGTCTCACTCCACACTTGGG +
Preference number: 4 (lower is better)
Translates to: GDRQHSTISSATEVKAPQVPPQT*SHSTLG
Trigger: CCCAAGTGTGGAGTGAGACCAAGTCTGGGGTGGCAC...TTGAGGAGCCTTCACCTCTGTTGCTGAGGAAATGGTAGAATGCTGCCTATCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CCA 90 bp TCCTCAGCAACAGAGGTGAAGGCTCCTCAACTCAGAAGCACAAATTGTAGGGGAGCACCTGCCATCTTTTaGGGTGCCACCCCAGACTTG +
Preference number: 4 (lower is better)
Translates to: SSATEVKAPQLRSTNCRGAPAIF*GATPDL
Trigger: CAAGTCTGGGGTGGCACCCCAAAAGATGGCAGGTGC...TCCCCTACAATTTGTGCTTCTGAGTTGAGGAGCCTTCACCTCTGTTGCTGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CCA 90 bp ACAGAGGTGAAGGCTCCTCAACTCAGAAGCACAAATTGTAGGGGACAGGGTGGGTCCACAGGCTGCTCTTaGCCTATATTTGGCTTCCCC +
Preference number: 4 (lower is better)
Translates to: TEVKAPQLRSTNCRGQGGSTGCS*PIFGFP
Trigger: GGGGAAGCCAAATATAGGCCAAGAGCAGCCTGTGGA...CCCACCCTGTCCCCTACAATTTGTGCTTCTGAGTTGAGGAGCCTTCACCTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CCA 90 bp ACAGAGGTGAAGGCTCCTCAACTCAGAAGCACAAATTGTAGGGGACAGGGTGGGCTCTCTCTGCCGTTCTaGATCACCCCTTTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: TEVKAPQLRSTNCRGQGGLSLPF*ITPFLL
Trigger: GAGAAGGAAAGGGGTGATCCAGAACGGCAGAGAGAG...CCCACCCTGTCCCCTACAATTTGTGCTTCTGAGTTGAGGAGCCTTCACCTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CCA 90 bp GGAGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTTCTTTCTCTGTCTCCTaGATGATGTTTTCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: GGGEEASQSRKSLDSVKGSFSVS*MMFSSS
Trigger: GGAACTGGAAAACATCATCCAGGAGACAGAGAAAGA...ACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR CCA 90 bp AGGGTAAAACGACTCCAAACATCACTAAGGGCAGGTGGGGGCCTGCTTGCTCAGATTTTCCCTGTAGGTTaGGGTGATGGGGGAGGCTTT +
Preference number: 4 (lower is better)
Translates to: RVKRLQTSLRAGGGLLAQIFPVG*GDGGGF
Trigger: AAAGCCTCCCCCATCACCCCAACCTACAGGGAAAAT...CTGAGCAAGCAGGCCCCCACCTGCCCTTAGTGATGTTTGGAGTCGTTTTACCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000389142.9
ENST00000435406.6
ENST00000551035.5
CDS-3UTR CCA 90 bp TCCTCAGCAACAGAGGTGAAGGCTCCTCAACTCAGAAGCACAAATTGTAGGGGAAGCTCTTTCTGCCGCTaGCGTTCCTTCTGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: SSATEVKAPQLRSTNCRGSSFCR*RSFWAS
Trigger: AGAGGCCCAGAAGGAACGCCAGCGGCAGAAAGAGCT...TCCCCTACAATTTGTGCTTCTGAGTTGAGGAGCCTTCACCTCTGTTGCTGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CCA 90 bp AGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGGAGGTGATACTCCACTCTGCTGTTTaGCCCTCAGGGGTTCCAGGG +
Preference number: 4 (lower is better)
Translates to: RTWWVLHTFFTGIVLEVILHSAV*PSGVPG
Trigger: CCCTGGAACCCCTGAGGGCCAAACAGCAGAGTGGAG...TATCACCTCCAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CCA 90 bp GATTGTGCTGGAGGTGATAGGCAGCATTCTACCATTTCCTCAGCAACAGAGGTGATCACTAAGGGCAGGTaGGGGCCTGCTTGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: DCAGGDRQHSTISSATEVITKGR*GPACSV
Trigger: CACTGAGCAAGCAGGCCCCCACCTGCCCTTAGTGAT...CACCTCTGTTGCTGAGGAAATGGTAGAATGCTGCCTATCACCTCCAGCACAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CCA 90 bp GGAGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTTGTTCAAGAACATGGTaGGTGCTTCACACCTTTTTC +
Preference number: 4 (lower is better)
Translates to: GGGEEASQSRKSLDSVKGCSRTW*VLHTFF
Trigger: GAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACA...ACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CCA 90 bp AGGCCCTTGGTAAGCAGGTGTTTCCTCCTCCCTTTCACGCTGGAAGTGAATAGCACCACGTCCGAAGATTaGCTCTGGGAAAGAAGGGAG +
Preference number: 4 (lower is better)
Translates to: RPLVSRCFLLPFTLEVNSTTSED*LWERRE
Trigger: CTCCCTTCTTTCCCAGAGCCAATCTTCGGACGTGGT...GCTATTCACTTCCAGCGTGAAAGGGAGGAGGAAACACCTGCTTACCAAGGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000550848.5
ENST00000551285.5
CDS-3UTR CCA 90 bp GCTCAACAACTCAGGGATCCCAGGCCCTTGGTAAGCAGGTGTTTCCTCCTCCCTACACTCTTGCCACCTTaGCTGTTTCATCATCCCAGT +
Preference number: 4 (lower is better)
Translates to: AQQLRDPRPLVSRCFLLPTLLPP*LFHHPS
Trigger: ACTGGGATGATGAAACAGCCAAGGTGGCAAGAGTGT...AGGGAGGAGGAAACACCTGCTTACCAAGGGCCTGGGATCCCTGAGTTGTTGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551285.5
CDS-3UTR TCA 90 bp TCCCAAGGCAATTCAATAGAAGAGGGTAAAACGACTCCAAACATCACTAAGGGCGGCTCTGCCCTCCCATaGCAGGCAACGGCAGGATCT +
Preference number: 4 (lower is better)
Translates to: SQGNSIEEGKTTPNITKGGSALP*QATAGS
Trigger: AGATCCTGCCGTTGCCTGTCATGGGAGGGCAGAGCC...GCCCTTAGTGATGTTTGGAGTCGTTTTACCCTCTTCTATTGAATTGCCTTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
ENST00000551035.5
CDS-3UTR TCA 90 bp GGTGATAGGCAGCATTCTACCATTTCCTCAGCAACAGAGGTGAAGGCTCCTCAACTTTCACGCTGGAAGTaGATAGCTCCAGCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: GDRQHSTISSATEVKAPQLSRWK*IAPAGR
Trigger: CCTGCCAGCTGGAGCTATTCACTTCCAGCGTGAAAG...TTGAGGAGCCTTCACCTCTGTTGCTGAGGAAATGGTAGAATGCTGCCTATCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR TCA 90 bp ATTCTCCAGACTTTCAGTAAGGAGGGAGGGCTGCTTTCCTTCTGTGACTTGGAGCTTTCACGCTGGAAGTaGATAGCTCCAGCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: ILQTFSKEGGLLSFCDLELSRWK*IAPAGR
Trigger: CCTGCCAGCTGGAGCTATTCACTTCCAGCGTGAAAG...CTCCAAGTCACAGAAGGAAAGCAGCCCTCCCTCCTTACTGAAAGTCTGGAGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552423.1
CDS-3UTR TCA 90 bp GCTTTGAGTCTACTGAGAAACAGCATGCAAGCAGGCCAGGAACACATTCCTCCACTTTCACGCTGGAAGTaGATAGCTCCAGCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: ALSLLRNSMQAGQEHIPPLSRWK*IAPAGR
Trigger: CCTGCCAGCTGGAGCTATTCACTTCCAGCGTGAAAG...TGGAGGAATGTGTTCCTGGCCTGCTTGCATGCTGTTTCTCAGTAGACTCAAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552787.5
CDS-3UTR TCA 90 bp AGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCAAGAGGACTTCACCTTTaGTCTCTGAATCTTCCATGT +
Preference number: 4 (lower is better)
Translates to: RWGGGKPVQEESGFREGSRGLHL*SLNLPC
Trigger: ACATGGAAGATTCAGAGATCAAAGGTGAAGTCCTCT...TGACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR TCA 90 bp AGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCACTTGCAGCTCCTCTATaGTTTTATCTCCATACTGCT +
Preference number: 4 (lower is better)
Translates to: RWGGGKPVQEESGFREGSLAAPL*FYLHTA
Trigger: AGCAGTATGGAGATAAAATCATAGAGGAGCTGCAAG...TGACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR TCA 90 bp TACCATTTCCTCAGCAACAGAGGTGAAGGCTCCTCAACTCAGAAGCACAAATTGGGGAGCACCAGAAGCTaGATCTGCTGCCTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: YHFLSNRGEGSSTQKHKLGSTRS*ICCLRA
Trigger: AGCCCTGAGGCAGCAGATTCAGCTTCTGGTGCTCCC...CAATTTGTGCTTCTGAGTTGAGGAGCCTTCACCTCTGTTGCTGAGGAAATGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR TCA 90 bp GATTGTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGTGCCCGATCCCGCTCTaGCTCCTTCTTCAGCCCATC +
Preference number: 4 (lower is better)
Translates to: DCSRTWWVLHTFFTGIVLCPIPL*LLLQPI
Trigger: GATGGGCTGAAGAAGGAGTCAGAGCGGGATCGGGCA...CAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACAATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR TCA 90 bp TTGTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGGATGCCCGATCCCGCTCTaGCTCCTTCTTCAGCCCATC +
Preference number: 4 (lower is better)
Translates to: LFKNMVGASHLFHWDCAGCPIPL*LLLQPI
Trigger: GATGGGCTGAAGAAGGAGTCAGAGCGGGATCGGGCA...TCCAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR TCA 90 bp AGGGTAAAACGACTCCAAACATCACTAAGGGCAGGTGGGGGCCTGCTTGCTCAGAGAGTCTGGATTCCGTaGAGGGTCAAGTGTAGTGTT +
Preference number: 4 (lower is better)
Translates to: RVKRLQTSLRAGGGLLAQRVWIP*RVKCSV
Trigger: AACACTACACTTGACCCTTCACGGAATCCAGACTCT...CTGAGCAAGCAGGCCCCCACCTGCCCTTAGTGATGTTTGGAGTCGTTTTACCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
ENST00000551035.5
CDS-3UTR TCA 90 bp GTTCAGGAGAGCAAATATCACAGGCCCGGTGAGGTCTCAAGGTGGCTGCCAGCAAGGAAGAGGATTGAGTaGGAGTTCAGGAGAGCAAAT +
Preference number: 4 (lower is better)
Translates to: VQESKYHRPGEVSRWLPARKRIE*EFRRAN
Trigger: ATTTGCTCTCCTGAACTCTCACTCAATCCTCTTCCT...TGCTGGCAGCCACCTTGAGACCTCACCGGGCCTGTGATATTTGCTCTCCTGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
CDS-3UTR TCA 90 bp ACTTCACCTTTGATCTCTGAATCTTCCATGTGGTATTGCTGGATGTGGCGTCCAAAGGCTGCCCTCCCATaGCAGGCAACGGCAGGATCT +
Preference number: 4 (lower is better)
Translates to: TSPLISESSMWYCWMWRPKAALP*QATAGS
Trigger: AGATCCTGCCGTTGCCTGTCATGGGAGGGCAGCCTT...TGGACGCCACATCCAGCAATACCACATGGAAGATTCAGAGATCAAAGGTGAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000550848.5
ENST00000551285.5
CDS-3UTR GCA 90 bp AAGGCTCCTCAACTCAGAAGCACAAATTGTAGGGGACAGGGTGGGCAGGGAAAGCGTTTAAGACGATGCTaGTTGGAGGCCTTGGCTGTT +
Preference number: 4 (lower is better)
Translates to: KAPQLRSTNCRGQGGQGKRLRRC*LEALAV
Trigger: AACAGCCAAGGCCTCCAAGCAGCATCGTCTTAAACG...CTTTCCCTGCCCACCCTGTCCCCTACAATTTGTGCTTCTGAGTTGAGGAGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
CDS-3UTR GCA 90 bp TCCTCAGCAACAGAGGTGAAGGCTCCTCAACTCAGAAGCACAAATTGTAGGGGAGGCAGAGCCGAGGAGTaGGAATGGTCAGCACATAAG +
Preference number: 4 (lower is better)
Translates to: SSATEVKAPQLRSTNCRGGRAEE*EWSAHK
Trigger: CTTATGTGCTGACCATTCGCACTCCTCGGCTCTGCC...TCCCCTACAATTTGTGCTTCTGAGTTGAGGAGCCTTCACCTCTGTTGCTGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR GCA 90 bp TCAATAGAAGAGGGTAAAACGACTCCAAACATCACTAAGGGCAGGTGGGGGCCTGGCAGAGCCGAGGAGTaGGAATGGTCAGCACATAAG +
Preference number: 4 (lower is better)
Translates to: SIEEGKTTPNITKGRWGPGRAEE*EWSAHK
Trigger: CTTATGTGCTGACCATTCGCACTCCTCGGCTCTGCC...AGGCCCCCACCTGCCCTTAGTGATGTTTGGAGTCGTTTTACCCTCTTCTATTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
ENST00000551035.5
CDS-3UTR GCA 90 bp GCTTTGAGTCTACTGAGAAACAGCATGCAAGCAGGCCAGGAACACATTCCTCCAGGCAGAGCCGAGGAGTaGGAATGGTCAGCACATAAG +
Preference number: 4 (lower is better)
Translates to: ALSLLRNSMQAGQEHIPPGRAEE*EWSAHK
Trigger: CTTATGTGCTGACCATTCGCACTCCTCGGCTCTGCC...TGGAGGAATGTGTTCCTGGCCTGCTTGCATGCTGTTTCTCAGTAGACTCAAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552787.5
CDS-3UTR GCA 90 bp ACAGAGGTGAAGGCTCCTCAACTCAGAAGCACAAATTGTAGGGGACAGGGTGGGGCATCATCCACAGGCTaGTCTTGGCCTATATTTGGC +
Preference number: 4 (lower is better)
Translates to: TEVKAPQLRSTNCRGQGGASSTG*SWPIFG
Trigger: GCCAAATATAGGCCAAGAGCAGCCTGTGGATGATGC...CCCACCCTGTCCCCTACAATTTGTGCTTCTGAGTTGAGGAGCCTTCACCTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR GCA 90 bp GTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGGAGGCCTCTGAGGGACTTCTaGAGCATCATCCACAGGCTG +
Preference number: 4 (lower is better)
Translates to: VQEHGGCFTPFSLGLCWRPLRDF*SIIHRL
Trigger: CAGCCTGTGGATGATGCTGCAGAAGTCCCTCAGAGG...CCTCCAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR GCA 90 bp TCCTCAGCAACAGAGGTGAAGGCTCCTCAACTCAGAAGCACAAATTGTAGGGGACCTCTGAGGGACTTCTaGAGCATCATCCACAGGCTG +
Preference number: 4 (lower is better)
Translates to: SSATEVKAPQLRSTNCRGPLRDF*SIIHRL
Trigger: CAGCCTGTGGATGATGCTGCAGAAGTCCCTCAGAGG...TCCCCTACAATTTGTGCTTCTGAGTTGAGGAGCCTTCACCTCTGTTGCTGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR GCA 90 bp GGTGATAGGCAGCATTCTACCATTTCCTCAGCAACAGAGGTGAAGGCTCCTCAACCTCTGAGGGACTTCTaGAGCATCATCCACAGGCTG +
Preference number: 4 (lower is better)
Translates to: GDRQHSTISSATEVKAPQPLRDF*SIIHRL
Trigger: CAGCCTGTGGATGATGCTGCAGAAGTCCCTCAGAGG...TTGAGGAGCCTTCACCTCTGTTGCTGAGGAAATGGTAGAATGCTGCCTATCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR GCA 90 bp TCAATAGAAGAGGGTAAAACGACTCCAAACATCACTAAGGGCAGGTGGGGGCCTCCTCTGAGGGACTTCTaGAGCATCATCCACAGGCTG +
Preference number: 4 (lower is better)
Translates to: SIEEGKTTPNITKGRWGPPLRDF*SIIHRL
Trigger: CAGCCTGTGGATGATGCTGCAGAAGTCCCTCAGAGG...AGGCCCCCACCTGCCCTTAGTGATGTTTGGAGTCGTTTTACCCTCTTCTATTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
ENST00000551035.5
CDS-3UTR GCA 90 bp AGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCAAATTCTCCCAGTAACTaGCGTTCATCCTCATCTTCA +
Preference number: 4 (lower is better)
Translates to: RWGGGKPVQEESGFREGSNSPSN*RSSSSS
Trigger: TGAAGATGAGGATGAACGGCAGTTACTGGGAGAATT...TGACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR GCA 90 bp TTGTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGGACCAGTTCCCGCTCCATaGCAGCCTTCACCTCCGAAC +
Preference number: 4 (lower is better)
Translates to: LFKNMVGASHLFHWDCAGPVPAP*QPSPPN
Trigger: GTTCGGAGGTGAAGGCTGGCATGGAGCGGGAACTGG...TCCAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000435406.6
CDS-3UTR GCA 90 bp TTGTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGGACCACACCCACAGAGTTaGCCGAGAGGTCCACAGCTC +
Preference number: 4 (lower is better)
Translates to: LFKNMVGASHLFHWDCAGPHPQS*PRGPQL
Trigger: GAGCTGTGGACCTCTCGGGCAACTCTGTGGGTGTGG...TCCAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR GCA 90 bp GTTCAGGAGAGCAAATATCACAGGCCCGGTGAGGTCTCAAGGTGGCTGCCAGCACAAGAACATGGTGGGTaGTTCACACCTTTTTCACTG +
Preference number: 4 (lower is better)
Translates to: VQESKYHRPGEVSRWLPAQEHGG*FTPFSL
Trigger: CAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTG...TGCTGGCAGCCACCTTGAGACCTCACCGGGCCTGTGATATTTGCTCTCCTGAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CCA 90 bp GTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGGAGGGCAGTCCTAACAAACTaGACAGCAGCGTTTCCGCCG +
Preference number: 4 (lower is better)
Translates to: VQEHGGCFTPFSLGLCWRAVLTN*TAAFPP
Trigger: CGGCGGAAACGCTGCTGTCCAGTTTGTTAGGACTGC...CCTCCAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CCA 90 bp TCCTCAGCAACAGAGGTGAAGGCTCCTCAACTCAGAAGCACAAATTGTAGGGGAGTGAATAGCTCCAGCTaGCAGGCGACACTCATAGCG +
Preference number: 4 (lower is better)
Translates to: SSATEVKAPQLRSTNCRGVNSSS*QATLIA
Trigger: CGCTATGAGTGTCGCCTGCCAGCTGGAGCTATTCAC...TCCCCTACAATTTGTGCTTCTGAGTTGAGGAGCCTTCACCTCTGTTGCTGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CCA 90 bp GTTCAGGAGAGCAAATATCACAGGCCCGGTGAGGTCTCAAGGTGGCTGCCAGCATCTGAATCTTCCATGTaGTATTGCTGGATGTGGCGT +
Preference number: 4 (lower is better)
Translates to: VQESKYHRPGEVSRWLPASESSM*YCWMWR
Trigger: ACGCCACATCCAGCAATACCACATGGAAGATTCAGA...TGCTGGCAGCCACCTTGAGACCTCACCGGGCCTGTGATATTTGCTCTCCTGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
CDS-3UTR CCA 90 bp GCTCAACAACTCAGGGATCCCAGGCCCTTGGTAAGCAGGTGTTTCCTCCTCCCTTCTGAATCTTCCATGTaGTATTGCTGGATGTGGCGT +
Preference number: 4 (lower is better)
Translates to: AQQLRDPRPLVSRCFLLPSESSM*YCWMWR
Trigger: ACGCCACATCCAGCAATACCACATGGAAGATTCAGA...AGGGAGGAGGAAACACCTGCTTACCAAGGGCCTGGGATCCCTGAGTTGTTGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000550848.5
ENST00000551285.5
CDS-3UTR CCA 90 bp TCAGCAAGCAGGGAGCATCTCTCATTGGGCTCAACAACTCAGGGATCCCAGGCCTCTGAATCTTCCATGTaGTATTGCTGGATGTGGCGT +
Preference number: 4 (lower is better)
Translates to: SASREHLSLGSTTQGSQASESSM*YCWMWR
Trigger: ACGCCACATCCAGCAATACCACATGGAAGATTCAGA...GGCCTGGGATCCCTGAGTTGTTGAGCCCAATGAGAGATGCTCCCTGCTTGCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000550848.5
ENST00000551285.5
CDS-3UTR CCA 90 bp GGTGATAGGCAGCATTCTACCATTTCCTCAGCAACAGAGGTGAAGGCTCCTCAAGCCGAGGAGTGCGAATaGTCAGCACATAAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: GDRQHSTISSATEVKAPQAEECE*SAHKSR
Trigger: CCTGCTCTTATGTGCTGACCATTCGCACTCCTCGGC...TTGAGGAGCCTTCACCTCTGTTGCTGAGGAAATGGTAGAATGCTGCCTATCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CCA 90 bp GTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGGAGGGTCTCACTCCACACTTaGGGGCCTAGATCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: VQEHGGCFTPFSLGLCWRVSLHT*GPRSCS
Trigger: GCTGCAAGATCTAGGCCCCCAAGTGTGGAGTGAGAC...CCTCCAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CCA 90 bp TCCTCAGCAACAGAGGTGAAGGCTCCTCAACTCAGAAGCACAAATTGTAGGGGAGTCTCACTCCACACTTaGGGGCCTAGATCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: SSATEVKAPQLRSTNCRGVSLHT*GPRSCS
Trigger: GCTGCAAGATCTAGGCCCCCAAGTGTGGAGTGAGAC...TCCCCTACAATTTGTGCTTCTGAGTTGAGGAGCCTTCACCTCTGTTGCTGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CCA 90 bp GGAGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTTGTTCTGAAAATCATTaGGAGCACCAGAAGCTGAAT +
Preference number: 4 (lower is better)
Translates to: GGGEEASQSRKSLDSVKGCSENH*EHQKLN
Trigger: ATTCAGCTTCTGGTGCTCCCAATGATTTTCAGAACA...ACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR CCA 90 bp AGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCATCTTTCTCTGTCTCCTaGATGATGTTTTCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: RWGGGKPVQEESGFREGSSFSVS*MMFSSS
Trigger: GGAACTGGAAAACATCATCCAGGAGACAGAGAAAGA...TGACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR CCA 90 bp GATTGTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGCTCCACTCTGCTGTTTaGCCCTCAGGGGTTCCAGGG +
Preference number: 4 (lower is better)
Translates to: DCSRTWWVLHTFFTGIVLLHSAV*PSGVPG
Trigger: CCCTGGAACCCCTGAGGGCCAAACAGCAGAGTGGAG...CAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACAATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CCA 90 bp TGTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGGAGATCACTAAGGGCAGGTaGGGGCCTGCTTGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: CSRTWWVLHTFFTGIVLEITKGR*GPACSV
Trigger: CACTGAGCAAGCAGGCCCCCACCTGCCCTTAGTGAT...CTCCAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CCA 90 bp AGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGGAGGTGATAATCACTAAGGGCAGGTaGGGGCCTGCTTGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: RTWWVLHTFFTGIVLEVIITKGR*GPACSV
Trigger: CACTGAGCAAGCAGGCCCCCACCTGCCCTTAGTGAT...TATCACCTCCAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CCA 90 bp AGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCAGATTTGTTTCAGCTGTaGGTTTTCCCGTTTCATCTC +
Preference number: 4 (lower is better)
Translates to: RWGGGKPVQEESGFREGSDLFQL*VFPFHL
Trigger: GAGATGAAACGGGAAAACCCACAGCTGAAACAAATC...TGACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315970.12
ENST00000389146.10
CDS-3UTR CCA 90 bp GAAGTGAATAGCTCCAGCTGGCAGGCGACACTCATAGCGCTGTTTGTACTTAGATCCGAAGATTGGCTCTaGGAAAGAAGGGAGGGTCGG +
Preference number: 4 (lower is better)
Translates to: EVNSSSWQATLIALFVLRSEDWL*ERREGR
Trigger: CCGACCCTCCCTTCTTTCCCAGAGCCAATCTTCGGA...TCTAAGTACAAACAGCGCTATGAGTGTCGCCTGCCAGCTGGAGCTATTCACTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000550848.5
ENST00000551285.5
CDS-3UTR TCA 90 bp TGTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGGAGCTTTCACGCTGGAAGTaGATAGCTCCAGCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: CSRTWWVLHTFFTGIVLELSRWK*IAPAGR
Trigger: CCTGCCAGCTGGAGCTATTCACTTCCAGCGTGAAAG...CTCCAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR TCA 90 bp AGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCATTCACCTTTGATCTCTaGATCTTCCATGTGGTATTG +
Preference number: 4 (lower is better)
Translates to: RWGGGKPVQEESGFREGSFTFDL*IFHVVL
Trigger: CAATACCACATGGAAGATTCAGAGATCAAAGGTGAA...TGACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR TCA 90 bp GTTCAGGAGAGCAAATATCACAGGCCCGGTGAGGTCTCAAGGTGGCTGCCAGCAAGAGGACTTCACCTTTaGTCTCTGAATCTTCCATGT +
Preference number: 4 (lower is better)
Translates to: VQESKYHRPGEVSRWLPARGLHL*SLNLPC
Trigger: ACATGGAAGATTCAGAGATCAAAGGTGAAGTCCTCT...TGCTGGCAGCCACCTTGAGACCTCACCGGGCCTGTGATATTTGCTCTCCTGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000439210.6
ENST00000551035.5
CDS-3UTR TCA 90 bp GCTCAACAACTCAGGGATCCCAGGCCCTTGGTAAGCAGGTGTTTCCTCCTCCCTAGAGGACTTCACCTTTaGTCTCTGAATCTTCCATGT +
Preference number: 4 (lower is better)
Translates to: AQQLRDPRPLVSRCFLLPRGLHL*SLNLPC
Trigger: ACATGGAAGATTCAGAGATCAAAGGTGAAGTCCTCT...AGGGAGGAGGAAACACCTGCTTACCAAGGGCCTGGGATCCCTGAGTTGTTGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000550848.5
ENST00000551285.5
CDS-3UTR TCA 90 bp GTTCAGGAGAGCAAATATCACAGGCCCGGTGAGGTCTCAAGGTGGCTGCCAGCACTTGCAGCTCCTCTATaGTTTTATCTCCATACTGCT +
Preference number: 4 (lower is better)
Translates to: VQESKYHRPGEVSRWLPALAAPL*FYLHTA
Trigger: AGCAGTATGGAGATAAAATCATAGAGGAGCTGCAAG...TGCTGGCAGCCACCTTGAGACCTCACCGGGCCTGTGATATTTGCTCTCCTGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
CDS-3UTR TCA 90 bp TCCCAAGGCAATTCAATAGAAGAGGGTAAAACGACTCCAAACATCACTAAGGGCGGGAGCACCAGAAGCTaGATCTGCTGCCTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: SQGNSIEEGKTTPNITKGGSTRS*ICCLRA
Trigger: AGCCCTGAGGCAGCAGATTCAGCTTCTGGTGCTCCC...GCCCTTAGTGATGTTTGGAGTCGTTTTACCCTCTTCTATTGAATTGCCTTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
ENST00000551035.5
CDS-3UTR TCA 90 bp TCCTCAGCAACAGAGGTGAAGGCTCCTCAACTCAGAAGCACAAATTGTAGGGGATTCTCTGGTTCCCTCTaGGGGACTTCTGCAGCATCA +
Preference number: 4 (lower is better)
Translates to: SSATEVKAPQLRSTNCRGFSGSL*GTSAAS
Trigger: TGATGCTGCAGAAGTCCCTCAGAGGGAACCAGAGAA...TCCCCTACAATTTGTGCTTCTGAGTTGAGGAGCCTTCACCTCTGTTGCTGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR TCA 90 bp GTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGGAGGTTCTCTGGTTCCCTCTaGGGGACTTCTGCAGCATCA +
Preference number: 4 (lower is better)
Translates to: VQEHGGCFTPFSLGLCWRFSGSL*GTSAAS
Trigger: TGATGCTGCAGAAGTCCCTCAGAGGGAACCAGAGAA...CCTCCAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR TCA 90 bp TCAATAGAAGAGGGTAAAACGACTCCAAACATCACTAAGGGCAGGTGGGGGCCTTTCTCTGGTTCCCTCTaGGGGACTTCTGCAGCATCA +
Preference number: 4 (lower is better)
Translates to: SIEEGKTTPNITKGRWGPFSGSL*GTSAAS
Trigger: TGATGCTGCAGAAGTCCCTCAGAGGGAACCAGAGAA...AGGCCCCCACCTGCCCTTAGTGATGTTTGGAGTCGTTTTACCCTCTTCTATTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
ENST00000551035.5
CDS-3UTR TCA 90 bp TCCCAAGGCAATTCAATAGAAGAGGGTAAAACGACTCCAAACATCACTAAGGGCTGCCCGATCCCGCTCTaGCTCCTTCTTCAGCCCATC +
Preference number: 4 (lower is better)
Translates to: SQGNSIEEGKTTPNITKGCPIPL*LLLQPI
Trigger: GATGGGCTGAAGAAGGAGTCAGAGCGGGATCGGGCA...GCCCTTAGTGATGTTTGGAGTCGTTTTACCCTCTTCTATTGAATTGCCTTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
ENST00000551035.5
CDS-3UTR TCA 90 bp TCAATAGAAGAGGGTAAAACGACTCCAAACATCACTAAGGGCAGGTGGGGGCCTGGAGAGGAAGAGGATTaGGTGAGAGTTCAGGAGAGC +
Preference number: 4 (lower is better)
Translates to: SIEEGKTTPNITKGRWGPGEEED*VRVQES
Trigger: GCTCTCCTGAACTCTCACTCAATCCTCTTCCTCTCC...AGGCCCCCACCTGCCCTTAGTGATGTTTGGAGTCGTTTTACCCTCTTCTATTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
ENST00000551035.5
CDS-3UTR TCA 90 bp GTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGGAGGCCTCAGCAACAGAGGTaGAGGCTCCTCAACTCAGAA +
Preference number: 4 (lower is better)
Translates to: VQEHGGCFTPFSLGLCWRPQQQR*RLLNSE
Trigger: TTCTGAGTTGAGGAGCCTTCACCTCTGTTGCTGAGG...CCTCCAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR TCA 90 bp TCAATAGAAGAGGGTAAAACGACTCCAAACATCACTAAGGGCAGGTGGGGGCCTCCTCAGCAACAGAGGTaGAGGCTCCTCAACTCAGAA +
Preference number: 4 (lower is better)
Translates to: SIEEGKTTPNITKGRWGPPQQQR*RLLNSE
Trigger: TTCTGAGTTGAGGAGCCTTCACCTCTGTTGCTGAGG...AGGCCCCCACCTGCCCTTAGTGATGTTTGGAGTCGTTTTACCCTCTTCTATTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR GCA 90 bp GTTCAGGAGAGCAAATATCACAGGCCCGGTGAGGTCTCAAGGTGGCTGCCAGCAAATTCTCCCAGTAACTaGCGTTCATCCTCATCTTCA +
Preference number: 4 (lower is better)
Translates to: VQESKYHRPGEVSRWLPANSPSN*RSSSSS
Trigger: TGAAGATGAGGATGAACGGCAGTTACTGGGAGAATT...TGCTGGCAGCCACCTTGAGACCTCACCGGGCCTGTGATATTTGCTCTCCTGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
CDS-3UTR GCA 90 bp TCCCAAGGCAATTCAATAGAAGAGGGTAAAACGACTCCAAACATCACTAAGGGCCCAGTTCCCGCTCCATaGCAGCCTTCACCTCCGAAC +
Preference number: 4 (lower is better)
Translates to: SQGNSIEEGKTTPNITKGPVPAP*QPSPPN
Trigger: GTTCGGAGGTGAAGGCTGGCATGGAGCGGGAACTGG...GCCCTTAGTGATGTTTGGAGTCGTTTTACCCTCTTCTATTGAATTGCCTTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000435406.6
ENST00000551035.5
CDS-3UTR GCA 90 bp GATTGTGCTGGAGGTGATAGGCAGCATTCTACCATTTCCTCAGCAACAGAGGTGATCAGTCAGCCAACGTaGACCCTCTTCAGTCCCTTC +
Preference number: 4 (lower is better)
Translates to: DCAGGDRQHSTISSATEVISQPT*TLFSPF
Trigger: GAAGGGACTGAAGAGGGTGCACGTTGGCTGACTGAT...CACCTCTGTTGCTGAGGAAATGGTAGAATGCTGCCTATCACCTCCAGCACAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR GCA 90 bp TCCTCAGCAACAGAGGTGAAGGCTCCTCAACTCAGAAGCACAAATTGTAGGGGAATCAGTCAGCCAACGTaGACCCTCTTCAGTCCCTTC +
Preference number: 4 (lower is better)
Translates to: SSATEVKAPQLRSTNCRGISQPT*TLFSPF
Trigger: GAAGGGACTGAAGAGGGTGCACGTTGGCTGACTGAT...TCCCCTACAATTTGTGCTTCTGAGTTGAGGAGCCTTCACCTCTGTTGCTGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR GCA 90 bp TCAATAGAAGAGGGTAAAACGACTCCAAACATCACTAAGGGCAGGTGGGGGCCTATCAGTCAGCCAACGTaGACCCTCTTCAGTCCCTTC +
Preference number: 4 (lower is better)
Translates to: SIEEGKTTPNITKGRWGPISQPT*TLFSPF
Trigger: GAAGGGACTGAAGAGGGTGCACGTTGGCTGACTGAT...AGGCCCCCACCTGCCCTTAGTGATGTTTGGAGTCGTTTTACCCTCTTCTATTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
ENST00000551035.5
CDS-3UTR GCA 90 bp CTGATTGTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCCTCTCCAGCTCTTTCTaGCGCTGGCGTTCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: LIVQEHGGCFTPFSLGLCLSSSF*RWRSFW
Trigger: CCAGAAGGAACGCCAGCGGCAGAAAGAGCTGGAGAG...GCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACAATCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR GCA 90 bp CTGATTGTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCGTGTCCTGCCCTCCTTaGTCTCTCTACCCACCTCCA +
Preference number: 4 (lower is better)
Translates to: LIVQEHGGCFTPFSLGLCVSCPP*SLYPPP
Trigger: TGGAGGTGGGTAGAGAGAGCAAGGAGGGCAGGACAC...GCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACAATCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR GCA 90 bp GTTCAGGAGAGCAAATATCACAGGCCCGGTGAGGTCTCAAGGTGGCTGCCAGCAATTTTATCTCCATACTaGTTTGAGTCGGCTTGCCTC +
Preference number: 4 (lower is better)
Translates to: VQESKYHRPGEVSRWLPAILSPY*FESACL
Trigger: GAGGCAAGCCGACTCAAAGCAGTATGGAGATAAAAT...TGCTGGCAGCCACCTTGAGACCTCACCGGGCCTGTGATATTTGCTCTCCTGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
ENST00000439210.6
CDS-3UTR CCA 90 bp TGTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGGAGACCACGTCCGAAGATTaGCTCTGCCCTCCCATGACA +
Preference number: 4 (lower is better)
Translates to: CSRTWWVLHTFFTGIVLETTSED*LCPPMT
Trigger: TGTCATGGGAGGGCAGAGCCAATCTTCGGACGTGGT...CTCCAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CCA 90 bp AGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGGAGGTGATAACCACGTCCGAAGATTaGCTCTGCCCTCCCATGACA +
Preference number: 4 (lower is better)
Translates to: RTWWVLHTFFTGIVLEVITTSED*LCPPMT
Trigger: TGTCATGGGAGGGCAGAGCCAATCTTCGGACGTGGT...TATCACCTCCAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CCA 90 bp TTGTCTTCAGCAAGCAGGGAGCATCTCTCATTGGGCTCAACAACTCAGGGATCCGGGAGCATCTCTCATTaGGCTCAACAACTCAGGGAT +
Preference number: 4 (lower is better)
Translates to: LSSASREHLSLGSTTQGSGSISH*AQQLRD
Trigger: ATCCCTGAGTTGTTGAGCCCAATGAGAGATGCTCCC...GGATCCCTGAGTTGTTGAGCCCAATGAGAGATGCTCCCTGCTTGCTGAAGACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000550848.5
ENST00000551285.5
CDS-3UTR CCA 90 bp GATTGTGCTGGAGGTGATAGGCAGCATTCTACCATTTCCTCAGCAACAGAGGTGGCTGCTTGGAGGCCTTaGCTGTTTCATCATCCCAGT +
Preference number: 4 (lower is better)
Translates to: DCAGGDRQHSTISSATEVAAWRP*LFHHPS
Trigger: ACTGGGATGATGAAACAGCCAAGGCCTCCAAGCAGC...CACCTCTGTTGCTGAGGAAATGGTAGAATGCTGCCTATCACCTCCAGCACAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
CDS-3UTR CCA 90 bp TTGGTCTCACTCCACACTTGGGGGCCTAGATCTTGCAGCTCCTCTATGATTTTAGCCGAGGAGTGCGAATaGTCAGCACATAAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: LVSLHTWGPRSCSSSMILAEECE*SAHKSR
Trigger: CCTGCTCTTATGTGCTGACCATTCGCACTCCTCGGC...TAAAATCATAGAGGAGCTGCAAGATCTAGGCCCCCAAGTGTGGAGTGAGACCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552787.5
CDS-3UTR CCA 90 bp TCCCAAGGCAATTCAATAGAAGAGGGTAAAACGACTCCAAACATCACTAAGGGCAAGGGTGACAGAGGATaGCCTGCGGTGCAGCACTGG +
Preference number: 4 (lower is better)
Translates to: SQGNSIEEGKTTPNITKGKGDRG*PAVQHW
Trigger: CCAGTGCTGCACCGCAGGCCATCCTCTGTCACCCTT...GCCCTTAGTGATGTTTGGAGTCGTTTTACCCTCTTCTATTGAATTGCCTTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
ENST00000551035.5
CDS-3UTR CCA 90 bp CTGATTGTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCGTGCCACCCCAGACTTaGTCTCACTCCACACTTGGG +
Preference number: 4 (lower is better)
Translates to: LIVQEHGGCFTPFSLGLCVPPQT*SHSTLG
Trigger: CCCAAGTGTGGAGTGAGACCAAGTCTGGGGTGGCAC...GCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACAATCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CCA 90 bp CTGATTGTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCGCACCTGCCATCTTTTaGGGTGCCACCCCAGACTTG +
Preference number: 4 (lower is better)
Translates to: LIVQEHGGCFTPFSLGLCAPAIF*GATPDL
Trigger: CAAGTCTGGGGTGGCACCCCAAAAGATGGCAGGTGC...GCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACAATCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CCA 90 bp CTGATTGTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCCCTTACTGTCATCCTTaGTCGGGCTCGCACCTGCCA +
Preference number: 4 (lower is better)
Translates to: LIVQEHGGCFTPFSLGLCPYCHP*SGSHLP
Trigger: TGGCAGGTGCGAGCCCGACCAAGGATGACAGTAAGG...GCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACAATCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CCA 90 bp GATTGTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGCCTTACTGTCATCCTTaGTCGGGCTCGCACCTGCCA +
Preference number: 4 (lower is better)
Translates to: DCSRTWWVLHTFFTGIVLPYCHP*SGSHLP
Trigger: TGGCAGGTGCGAGCCCGACCAAGGATGACAGTAAGG...CAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CCA 90 bp GATTGTGCTGGAGGTGATAGGCAGCATTCTACCATTTCCTCAGCAACAGAGGTGTGGGGCCTGGTCCTCTaGCTCATTAAGCATCTTCCA +
Preference number: 4 (lower is better)
Translates to: DCAGGDRQHSTISSATEVWGLVL*LIKHLP
Trigger: TGGAAGATGCTTAATGAGCCAGAGGACCAGGCCCCA...CACCTCTGTTGCTGAGGAAATGGTAGAATGCTGCCTATCACCTCCAGCACAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CCA 90 bp GATTGTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGAGCTCTTTCTGCCGCTaGCGTTCCTTCTGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: DCSRTWWVLHTFFTGIVLSSFCR*RSFWAS
Trigger: AGAGGCCCAGAAGGAACGCCAGCGGCAGAAAGAGCT...CAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CCA 90 bp TACCATTTCCTCAGCAACAGAGGTGAAGGCTCCTCAACTCAGAAGCACAAATTGAGCTCTTTCTGCCGCTaGCGTTCCTTCTGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: YHFLSNRGEGSSTQKHKLSSFCR*RSFWAS
Trigger: AGAGGCCCAGAAGGAACGCCAGCGGCAGAAAGAGCT...CAATTTGTGCTTCTGAGTTGAGGAGCCTTCACCTCTGTTGCTGAGGAAATGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CCA 90 bp AGGGTAAAACGACTCCAAACATCACTAAGGGCAGGTGGGGGCCTGCTTGCTCAGTCACACCTTTTTCACTaGGATTGTGCTGGAGGTGAT +
Preference number: 4 (lower is better)
Translates to: RVKRLQTSLRAGGGLLAQSHLFH*DCAGGD
Trigger: ATCACCTCCAGCACAATCCCAGTGAAAAAGGTGTGA...CTGAGCAAGCAGGCCCCCACCTGCCCTTAGTGATGTTTGGAGTCGTTTTACCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR TCA 90 bp GTTCAGGAGAGCAAATATCACAGGCCCGGTGAGGTCTCAAGGTGGCTGCCAGCATTCACCTTTGATCTCTaGATCTTCCATGTGGTATTG +
Preference number: 4 (lower is better)
Translates to: VQESKYHRPGEVSRWLPAFTFDL*IFHVVL
Trigger: CAATACCACATGGAAGATTCAGAGATCAAAGGTGAA...TGCTGGCAGCCACCTTGAGACCTCACCGGGCCTGTGATATTTGCTCTCCTGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
CDS-3UTR TCA 90 bp GCTCAACAACTCAGGGATCCCAGGCCCTTGGTAAGCAGGTGTTTCCTCCTCCCTTTCACCTTTGATCTCTaGATCTTCCATGTGGTATTG +
Preference number: 4 (lower is better)
Translates to: AQQLRDPRPLVSRCFLLPFTFDL*IFHVVL
Trigger: CAATACCACATGGAAGATTCAGAGATCAAAGGTGAA...AGGGAGGAGGAAACACCTGCTTACCAAGGGCCTGGGATCCCTGAGTTGTTGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000550848.5
ENST00000551285.5
CDS-3UTR TCA 90 bp TTCTCCAGACTTTCAGTAAGGAGGGAGGGCTGCTTTCCTTCTGTGACTTGGAGAATCCCAGTCGAAGGCTaGTTGGTAGTAGCCGAGATA +
Preference number: 4 (lower is better)
Translates to: FSRLSVRREGCFPSVTWRIPVEG*LVVAEI
Trigger: TATCTCGGCTACTACCAATCAGCCTTCGACTGGGAT...TCTCCAAGTCACAGAAGGAAAGCAGCCCTCCCTCCTTACTGAAAGTCTGGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552423.1
CDS-3UTR TCA 90 bp TCAATAGAAGAGGGTAAAACGACTCCAAACATCACTAAGGGCAGGTGGGGGCCTATCTCCATACTGCTTTaGGTCTACGGCTTGCCTCTG +
Preference number: 4 (lower is better)
Translates to: SIEEGKTTPNITKGRWGPISILL*VYGLPL
Trigger: CAGAGGCAAGCCGTAGACTCAAAGCAGTATGGAGAT...AGGCCCCCACCTGCCCTTAGTGATGTTTGGAGTCGTTTTACCCTCTTCTATTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257966.12
ENST00000551035.5
CDS-3UTR TCA 90 bp TCAATAGAAGAGGGTAAAACGACTCCAAACATCACTAAGGGCAGGTGGGGGCCTTCTCTGTCTCCTGGATaGTGTTTTCCAGTTCCCGCT +
Preference number: 4 (lower is better)
Translates to: SIEEGKTTPNITKGRWGPSLSPG*CFPVPA
Trigger: AGCGGGAACTGGAAAACATCATCCAGGAGACAGAGA...AGGCCCCCACCTGCCCTTAGTGATGTTTGGAGTCGTTTTACCCTCTTCTATTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000435406.6
ENST00000551035.5
CDS-3UTR TCA 90 bp TGTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGGAGCCTCAGCAACAGAGGTaGAGGCTCCTCAACTCAGAA +
Preference number: 4 (lower is better)
Translates to: CSRTWWVLHTFFTGIVLEPQQQR*RLLNSE
Trigger: TTCTGAGTTGAGGAGCCTTCACCTCTGTTGCTGAGG...CTCCAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR GCA 90 bp TTGTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGGACGCACTTGGACCCATTaGCATAGGTCTGGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: LFKNMVGASHLFHWDCAGRTWTH*HRSGCG
Trigger: ACCACAGCCAGACCTATGGCAATGGGTCCAAGTGCG...TCCAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
CDS-3UTR GCA 90 bp CTGATTGTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCGGCAGAGCCGAGGAGTaGGAATGGTCAGCACATAAG +
Preference number: 4 (lower is better)
Translates to: LIVQEHGGCFTPFSLGLCGRAEE*EWSAHK
Trigger: CTTATGTGCTGACCATTCGCACTCCTCGGCTCTGCC...GCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACAATCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR GCA 90 bp TTGTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGGAGGCAGAGCCGAGGAGTaGGAATGGTCAGCACATAAG +
Preference number: 4 (lower is better)
Translates to: LFKNMVGASHLFHWDCAGGRAEE*EWSAHK
Trigger: CTTATGTGCTGACCATTCGCACTCCTCGGCTCTGCC...TCCAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR GCA 90 bp TCAATAGAAGAGGGTAAAACGACTCCAAACATCACTAAGGGCAGGTGGGGGCCTTCTTCCATCTCTCTCTaGCGTTCTGGATCACCCCTT +
Preference number: 4 (lower is better)
Translates to: SIEEGKTTPNITKGRWGPSSISL*RSGSPL
Trigger: AAGGGGTGATCCAGAACGGCAGAGAGAGATGGAAGA...AGGCCCCCACCTGCCCTTAGTGATGTTTGGAGTCGTTTTACCCTCTTCTATTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
ENST00000551035.5
CDS-3UTR GCA 90 bp AGGGTAAAACGACTCCAAACATCACTAAGGGCAGGTGGGGGCCTGCTTGCTCAGAATTCTCCCAGTAACTaGCGTTCATCCTCATCTTCA +
Preference number: 4 (lower is better)
Translates to: RVKRLQTSLRAGGGLLAQNSPSN*RSSSSS
Trigger: TGAAGATGAGGATGAACGGCAGTTACTGGGAGAATT...CTGAGCAAGCAGGCCCCCACCTGCCCTTAGTGATGTTTGGAGTCGTTTTACCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
ENST00000551035.5
CDS-3UTR GCA 90 bp AGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGGAGGTGATAATCAGTCAGCCAACGTaGACCCTCTTCAGTCCCTTC +
Preference number: 4 (lower is better)
Translates to: RTWWVLHTFFTGIVLEVIISQPT*TLFSPF
Trigger: GAAGGGACTGAAGAGGGTGCACGTTGGCTGACTGAT...TATCACCTCCAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR GCA 90 bp TCCCAAGGCAATTCAATAGAAGAGGGTAAAACGACTCCAAACATCACTAAGGGCCTCTCCAGCTCTTTCTaGCGCTGGCGTTCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: SQGNSIEEGKTTPNITKGLSSSF*RWRSFW
Trigger: CCAGAAGGAACGCCAGCGGCAGAAAGAGCTGGAGAG...GCCCTTAGTGATGTTTGGAGTCGTTTTACCCTCTTCTATTGAATTGCCTTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
ENST00000551035.5
CDS-3UTR CCA 90 bp CTGATTGTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCGCAGTCCTAACAAACTaGACAGCAGCGTTTCCGCCG +
Preference number: 4 (lower is better)
Translates to: LIVQEHGGCFTPFSLGLCAVLTN*TAAFPP
Trigger: CGGCGGAAACGCTGCTGTCCAGTTTGTTAGGACTGC...GCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACAATCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CCA 90 bp CTGATTGTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCACCACGTCCGAAGATTaGCTCTGCCCTCCCATGACA +
Preference number: 4 (lower is better)
Translates to: LIVQEHGGCFTPFSLGLCTTSED*LCPPMT
Trigger: TGTCATGGGAGGGCAGAGCCAATCTTCGGACGTGGT...GCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACAATCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CCA 90 bp TCCTCAGCAACAGAGGTGAAGGCTCCTCAACTCAGAAGCACAAATTGTAGGGGAGGGAGCATCTCTCATTaGGCTCAACAACTCAGGGAT +
Preference number: 4 (lower is better)
Translates to: SSATEVKAPQLRSTNCRGGSISH*AQQLRD
Trigger: ATCCCTGAGTTGTTGAGCCCAATGAGAGATGCTCCC...TCCCCTACAATTTGTGCTTCTGAGTTGAGGAGCCTTCACCTCTGTTGCTGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CCA 90 bp CCACTCTCAATTCTCCAGACTTTCAGTAAGGAGGGAGGGCTGCTTTCCTTCTGTGGGAGCATCTCTCATTaGGCTCAACAACTCAGGGAT +
Preference number: 4 (lower is better)
Translates to: PLSILQTFSKEGGLLSFCGSISH*AQQLRD
Trigger: ATCCCTGAGTTGTTGAGCCCAATGAGAGATGCTCCC...ACAGAAGGAAAGCAGCCCTCCCTCCTTACTGAAAGTCTGGAGAATTGAGAGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552423.1
CDS-3UTR CCA 90 bp TCTCCTCCTTCTCTAATTACTCACCGGCTTGCCTCTGAACGTAGGCCATGTACTGGGAGCATCTCTCATTaGGCTCAACAACTCAGGGAT +
Preference number: 4 (lower is better)
Translates to: SPPSLITHRLASERRPCTGSISH*AQQLRD
Trigger: ATCCCTGAGTTGTTGAGCCCAATGAGAGATGCTCCC...AGTACATGGCCTACGTTCAGAGGCAAGCCGGTGAGTAATTAGAGAAGGAGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552787.5
CDS-3UTR CCA 90 bp CTGATTGTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCGTCTCACTCCACACTTaGGGGCCTAGATCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: LIVQEHGGCFTPFSLGLCVSLHT*GPRSCS
Trigger: GCTGCAAGATCTAGGCCCCCAAGTGTGGAGTGAGAC...GCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACAATCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CCA 90 bp TCCCAAGGCAATTCAATAGAAGAGGGTAAAACGACTCCAAACATCACTAAGGGCGTGCCACCCCAGACTTaGTCTCACTCCACACTTGGG +
Preference number: 4 (lower is better)
Translates to: SQGNSIEEGKTTPNITKGVPPQT*SHSTLG
Trigger: CCCAAGTGTGGAGTGAGACCAAGTCTGGGGTGGCAC...GCCCTTAGTGATGTTTGGAGTCGTTTTACCCTCTTCTATTGAATTGCCTTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
ENST00000551035.5
CDS-3UTR CCA 90 bp AGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGGAGGTGATATCCACAGGCTGCTCTTaGCCTATATTTGGCTTCCCC +
Preference number: 4 (lower is better)
Translates to: RTWWVLHTFFTGIVLEVISTGCS*PIFGFP
Trigger: GGGGAAGCCAAATATAGGCCAAGAGCAGCCTGTGGA...TATCACCTCCAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CCA 90 bp AGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGGAGGTGATACTCTCTCTGCCGTTCTaGATCACCCCTTTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: RTWWVLHTFFTGIVLEVILSLPF*ITPFLL
Trigger: GAGAAGGAAAGGGGTGATCCAGAACGGCAGAGAGAG...TATCACCTCCAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CCA 90 bp GTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGGAGGAGTCCCTTCAGCCCATaGGCGGACAATTTTGATCTC +
Preference number: 4 (lower is better)
Translates to: VQEHGGCFTPFSLGLCWRSPFSP*ADNFDL
Trigger: GAGATCAAAATTGTCCGCCCATGGGCTGAAGGGACT...CCTCCAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CCA 90 bp ACAGAGGTGAAGGCTCCTCAACTCAGAAGCACAAATTGTAGGGGACAGGGTGGGTCACACCTTTTTCACTaGGATTGTGCTGGAGGTGAT +
Preference number: 4 (lower is better)
Translates to: TEVKAPQLRSTNCRGQGGSHLFH*DCAGGD
Trigger: ATCACCTCCAGCACAATCCCAGTGAAAAAGGTGTGA...CCCACCCTGTCCCCTACAATTTGTGCTTCTGAGTTGAGGAGCCTTCACCTCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CCA 90 bp AAGGCTCCTCAACTCAGAAGCACAAATTGTAGGGGACAGGGTGGGCAGGGAAAGTCACACCTTTTTCACTaGGATTGTGCTGGAGGTGAT +
Preference number: 4 (lower is better)
Translates to: KAPQLRSTNCRGQGGQGKSHLFH*DCAGGD
Trigger: ATCACCTCCAGCACAATCCCAGTGAAAAAGGTGTGA...CTTTCCCTGCCCACCCTGTCCCCTACAATTTGTGCTTCTGAGTTGAGGAGCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CCA 90 bp AGGGTAAAACGACTCCAAACATCACTAAGGGCAGGTGGGGGCCTGCTTGCTCAGTGTTCAAGAACATGGTaGGTGCTTCACACCTTTTTC +
Preference number: 4 (lower is better)
Translates to: RVKRLQTSLRAGGGLLAQCSRTW*VLHTFF
Trigger: GAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACA...CTGAGCAAGCAGGCCCCCACCTGCCCTTAGTGATGTTTGGAGTCGTTTTACCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CCA 90 bp AGGGTAAAACGACTCCAAACATCACTAAGGGCAGGTGGGGGCCTGCTTGCTCAGGATTGTTCAAGAACATaGTGGGTGCTTCACACCTTT +
Preference number: 4 (lower is better)
Translates to: RVKRLQTSLRAGGGLLAQDCSRT*WVLHTF
Trigger: AAAGGTGTGAAGCACCCACCATGTTCTTGAACAATC...CTGAGCAAGCAGGCCCCCACCTGCCCTTAGTGATGTTTGGAGTCGTTTTACCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CCA 90 bp AGGGTAAAACGACTCCAAACATCACTAAGGGCAGGTGGGGGCCTGCTTGCTCAGGATTTGTTTCAGCTGTaGGTTTTCCCGTTTCATCTC +
Preference number: 4 (lower is better)
Translates to: RVKRLQTSLRAGGGLLAQDLFQL*VFPFHL
Trigger: GAGATGAAACGGGAAAACCCACAGCTGAAACAAATC...CTGAGCAAGCAGGCCCCCACCTGCCCTTAGTGATGTTTGGAGTCGTTTTACCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000315970.12
CDS-3UTR TCA 90 bp ACAGAGGTGAAGGCTCCTCAACTCAGAAGCACAAATTGTAGGGGACAGGGTGGGCTTGCAGCTCCTCTATaGTTTTATCTCCATACTGCT +
Preference number: 4 (lower is better)
Translates to: TEVKAPQLRSTNCRGQGGLAAPL*FYLHTA
Trigger: AGCAGTATGGAGATAAAATCATAGAGGAGCTGCAAG...CCCACCCTGTCCCCTACAATTTGTGCTTCTGAGTTGAGGAGCCTTCACCTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR TCA 90 bp TACCATTTCCTCAGCAACAGAGGTGAAGGCTCCTCAACTCAGAAGCACAAATTGTTCTCTGGTTCCCTCTaGGGGACTTCTGCAGCATCA +
Preference number: 4 (lower is better)
Translates to: YHFLSNRGEGSSTQKHKLFSGSL*GTSAAS
Trigger: TGATGCTGCAGAAGTCCCTCAGAGGGAACCAGAGAA...CAATTTGTGCTTCTGAGTTGAGGAGCCTTCACCTCTGTTGCTGAGGAAATGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR TCA 90 bp TGTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGGAGTCTCTGTCTCCTGGATaGTGTTTTCCAGTTCCCGCT +
Preference number: 4 (lower is better)
Translates to: CSRTWWVLHTFFTGIVLESLSPG*CFPVPA
Trigger: AGCGGGAACTGGAAAACATCATCCAGGAGACAGAGA...CTCCAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000435406.6
CDS-3UTR GCA 90 bp TCCCAAGGCAATTCAATAGAAGAGGGTAAAACGACTCCAAACATCACTAAGGGCGTCCCCAGAGATACCTaGACCCTCGTCACAGAGGAA +
Preference number: 4 (lower is better)
Translates to: SQGNSIEEGKTTPNITKGVPRDT*TLVTEE
Trigger: TTCCTCTGTGACGAGGGTGCAGGTATCTCTGGGGAC...GCCCTTAGTGATGTTTGGAGTCGTTTTACCCTCTTCTATTGAATTGCCTTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
ENST00000551035.5
CDS-3UTR GCA 90 bp AGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGGAGGTGATAGCATCATCCACAGGCTaGTCTTGGCCTATATTTGGC +
Preference number: 4 (lower is better)
Translates to: RTWWVLHTFFTGIVLEVIASSTG*SWPIFG
Trigger: GCCAAATATAGGCCAAGAGCAGCCTGTGGATGATGC...TATCACCTCCAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR GCA 90 bp ACAGAGGTGAAGGCTCCTCAACTCAGAAGCACAAATTGTAGGGGACAGGGTGGGATTTTATCTCCATACTaGTTTGAGTCGGCTTGCCTC +
Preference number: 4 (lower is better)
Translates to: TEVKAPQLRSTNCRGQGGILSPY*FESACL
Trigger: GAGGCAAGCCGACTCAAAGCAGTATGGAGATAAAAT...CCCACCCTGTCCCCTACAATTTGTGCTTCTGAGTTGAGGAGCCTTCACCTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CCA 90 bp TCCCAAGGCAATTCAATAGAAGAGGGTAAAACGACTCCAAACATCACTAAGGGCGTGAATAGCTCCAGCTaGCAGGCGACACTCATAGCG +
Preference number: 4 (lower is better)
Translates to: SQGNSIEEGKTTPNITKGVNSSS*QATLIA
Trigger: CGCTATGAGTGTCGCCTGCCAGCTGGAGCTATTCAC...GCCCTTAGTGATGTTTGGAGTCGTTTTACCCTCTTCTATTGAATTGCCTTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
ENST00000551035.5
CDS-3UTR CCA 90 bp CTGATTGTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGGGGCCTGGTCCTCTaGCTCATTAAGCATCTTCCA +
Preference number: 4 (lower is better)
Translates to: LIVQEHGGCFTPFSLGLCWGLVL*LIKHLP
Trigger: TGGAAGATGCTTAATGAGCCAGAGGACCAGGCCCCA...GCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACAATCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CCA 90 bp TACCATTTCCTCAGCAACAGAGGTGAAGGCTCCTCAACTCAGAAGCACAAATTGCTCTCTCTGCCGTTCTaGATCACCCCTTTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: YHFLSNRGEGSSTQKHKLLSLPF*ITPFLL
Trigger: GAGAAGGAAAGGGGTGATCCAGAACGGCAGAGAGAG...CAATTTGTGCTTCTGAGTTGAGGAGCCTTCACCTCTGTTGCTGAGGAAATGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CCA 90 bp TCAATAGAAGAGGGTAAAACGACTCCAAACATCACTAAGGGCAGGTGGGGGCCTCGTCACAGAGGAACTTaGCTGTTTCATCATCCCAGT +
Preference number: 4 (lower is better)
Translates to: SIEEGKTTPNITKGRWGPRHRGT*LFHHPS
Trigger: ACTGGGATGATGAAACAGCCAAGTTCCTCTGTGACG...AGGCCCCCACCTGCCCTTAGTGATGTTTGGAGTCGTTTTACCCTCTTCTATTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551035.5
CDS-3UTR TCA 90 bp CTGATTGTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCATCCCAGTCGAAGGCTaGTTGGTAGTAGCCGAGATA +
Preference number: 4 (lower is better)
Translates to: LIVQEHGGCFTPFSLGLCIPVEG*LVVAEI
Trigger: TATCTCGGCTACTACCAATCAGCCTTCGACTGGGAT...GCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACAATCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
CDS-3UTR TCA 90 bp GATTGTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGATCCCAGTCGAAGGCTaGTTGGTAGTAGCCGAGATA +
Preference number: 4 (lower is better)
Translates to: DCSRTWWVLHTFFTGIVLIPVEG*LVVAEI
Trigger: TATCTCGGCTACTACCAATCAGCCTTCGACTGGGAT...CAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
CDS-3UTR TCA 90 bp TTGTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGGAATCCCAGTCGAAGGCTaGTTGGTAGTAGCCGAGATA +
Preference number: 4 (lower is better)
Translates to: LFKNMVGASHLFHWDCAGIPVEG*LVVAEI
Trigger: TATCTCGGCTACTACCAATCAGCCTTCGACTGGGAT...TCCAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
CDS-3UTR TCA 90 bp GATTGTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGATCTCCATACTGCTTTaGGTCTACGGCTTGCCTCTG +
Preference number: 4 (lower is better)
Translates to: DCSRTWWVLHTFFTGIVLISILL*VYGLPL
Trigger: CAGAGGCAAGCCGTAGACTCAAAGCAGTATGGAGAT...CAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257966.12
CDS-3UTR TCA 90 bp TTGTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGGATCTCTGTCTCCTGGATaGTGTTTTCCAGTTCCCGCT +
Preference number: 4 (lower is better)
Translates to: LFKNMVGASHLFHWDCAGSLSPG*CFPVPA
Trigger: AGCGGGAACTGGAAAACATCATCCAGGAGACAGAGA...TCCAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000435406.6
CDS-3UTR GCA 90 bp TTGTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGGACGTTTAAGACGATGCTaGTTGGAGGCCTTGGCTGTT +
Preference number: 4 (lower is better)
Translates to: LFKNMVGASHLFHWDCAGRLRRC*LEALAV
Trigger: AACAGCCAAGGCCTCCAAGCAGCATCGTCTTAAACG...TCCAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
CDS-3UTR GCA 90 bp GTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGGAGGTGGGGGCCTAGATCTTaGAGCTCCTCTATGATTTTA +
Preference number: 4 (lower is better)
Translates to: VQEHGGCFTPFSLGLCWRWGPRS*SSSMIL
Trigger: TAAAATCATAGAGGAGCTGCAAGATCTAGGCCCCCA...CCTCCAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR GCA 90 bp TTGTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGGATCTTCCATCTCTCTCTaGCGTTCTGGATCACCCCTT +
Preference number: 4 (lower is better)
Translates to: LFKNMVGASHLFHWDCAGSSISL*RSGSPL
Trigger: AAGGGGTGATCCAGAACGGCAGAGAGAGATGGAAGA...TCCAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR GCA 90 bp GATTGTGCTGGAGGTGATAGGCAGCATTCTACCATTTCCTCAGCAACAGAGGTGCAAGAACATGGTGGGTaGTTCACACCTTTTTCACTG +
Preference number: 4 (lower is better)
Translates to: DCAGGDRQHSTISSATEVQEHGG*FTPFSL
Trigger: CAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTG...CACCTCTGTTGCTGAGGAAATGGTAGAATGCTGCCTATCACCTCCAGCACAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR GCA 90 bp ACTGCTTTGAGTCTACTGAGAAACAGCATGCAAGCAGGCCAGGAACACATTCCTCGTTTAAGACGATGCTaGTTGGAGGCCTTTGATCTC +
Preference number: 4 (lower is better)
Translates to: TALSLLRNSMQAGQEHIPRLRRC*LEAFDL
Trigger: GAGATCAAAGGCCTCCAAGCAGCATCGTCTTAAACG...AGGAATGTGTTCCTGGCCTGCTTGCATGCTGTTTCTCAGTAGACTCAAAGCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552787.5
CDS-3UTR CCA 90 bp GATGTGGCGTCCATAACAGAATTCATATGTCCACCAGTCCTTTGTACACTCAATACCACGTCCGAAGATTaGCTCTGCCCTCCCATGACA +
Preference number: 4 (lower is better)
Translates to: DVASITEFICPPVLCTLNTTSED*LCPPMT
Trigger: TGTCATGGGAGGGCAGAGCCAATCTTCGGACGTGGT...ATTGAGTGTACAAAGGACTGGTGGACATATGAATTCTGTTATGGACGCCACATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552423.1
CDS-3UTR CCA 90 bp TCTCTGAATCTTCCATGTGGTATTGCTGGATGTGGCGTCCATAACAGAATTCATGTGAATAGCTCCAGCTaGCAGGCGACACTCATAGCG +
Preference number: 4 (lower is better)
Translates to: SLNLPCGIAGCGVHNRIHVNSSS*QATLIA
Trigger: CGCTATGAGTGTCGCCTGCCAGCTGGAGCTATTCAC...ATGAATTCTGTTATGGACGCCACATCCAGCAATACCACATGGAAGATTCAGAGA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000550848.5
ENST00000551285.5
ENST00000552423.1
CDS-3UTR CCA 90 bp TACCATTTCCTCAGCAACAGAGGTGAAGGCTCCTCAACTCAGAAGCACAAATTGGGGAGCATCTCTCATTaGGCTCAACAACTCAGGGAT +
Preference number: 4 (lower is better)
Translates to: YHFLSNRGEGSSTQKHKLGSISH*AQQLRD
Trigger: ATCCCTGAGTTGTTGAGCCCAATGAGAGATGCTCCC...CAATTTGTGCTTCTGAGTTGAGGAGCCTTCACCTCTGTTGCTGAGGAAATGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CCA 90 bp GATTGTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGGGGAGCATCTCTCATTaGGCTCAACAACTCAGGGAT +
Preference number: 4 (lower is better)
Translates to: DCSRTWWVLHTFFTGIVLGSISH*AQQLRD
Trigger: ATCCCTGAGTTGTTGAGCCCAATGAGAGATGCTCCC...CAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CCA 90 bp TCCCAAGGCAATTCAATAGAAGAGGGTAAAACGACTCCAAACATCACTAAGGGCCTCTCTCTGCCGTTCTaGATCACCCCTTTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: SQGNSIEEGKTTPNITKGLSLPF*ITPFLL
Trigger: GAGAAGGAAAGGGGTGATCCAGAACGGCAGAGAGAG...GCCCTTAGTGATGTTTGGAGTCGTTTTACCCTCTTCTATTGAATTGCCTTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
ENST00000551035.5
CDS-3UTR CCA 90 bp TTGTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGGAATTTTCCCTGTAGGTTaGGGTGATGGGGGAGGCTTT +
Preference number: 4 (lower is better)
Translates to: LFKNMVGASHLFHWDCAGIFPVG*GDGGGF
Trigger: AAAGCCTCCCCCATCACCCCAACCTACAGGGAAAAT...TCCAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000257966.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR TCA 90 bp TATGTCCACCAGTCCTTTGTCTTCAGCAAGCAGGGAGCATCTCTCATTGGGCTCTTCACCTTTGATCTCTaGATCTTCCATGTGGTATTG +
Preference number: 4 (lower is better)
Translates to: YVHQSFVFSKQGASLIGLFTFDL*IFHVVL
Trigger: CAATACCACATGGAAGATTCAGAGATCAAAGGTGAA...GAGCCCAATGAGAGATGCTCCCTGCTTGCTGAAGACAAAGGACTGGTGGACATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000550848.5
ENST00000551285.5
CDS-3UTR TCA 90 bp TTTGTCTTCAGCAAGCAGGGAGCATCTCTCATTGGGCTCAACAACTCAGGGATCAGAGGACTTCACCTTTaGTCTCTGAATCTTCCATGT +
Preference number: 4 (lower is better)
Translates to: FVFSKQGASLIGLNNSGIRGLHL*SLNLPC
Trigger: ACATGGAAGATTCAGAGATCAAAGGTGAAGTCCTCT...GATCCCTGAGTTGTTGAGCCCAATGAGAGATGCTCCCTGCTTGCTGAAGACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000550848.5
ENST00000551285.5
CDS-3UTR TCA 90 bp TCAATAGAAGAGGGTAAAACGACTCCAAACATCACTAAGGGCAGGTGGGGGCCTAGAGGACTTCACCTTTaGTCTCTGAATCTTCCATGT +
Preference number: 4 (lower is better)
Translates to: SIEEGKTTPNITKGRWGPRGLHL*SLNLPC
Trigger: ACATGGAAGATTCAGAGATCAAAGGTGAAGTCCTCT...AGGCCCCCACCTGCCCTTAGTGATGTTTGGAGTCGTTTTACCCTCTTCTATTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000551035.5
CDS-3UTR TCA 90 bp CCACTCTCAATTCTCCAGACTTTCAGTAAGGAGGGAGGGCTGCTTTCCTTCTGTAGAGGACTTCACCTTTaGTCTCTGAATCTTCCATGT +
Preference number: 4 (lower is better)
Translates to: PLSILQTFSKEGGLLSFCRGLHL*SLNLPC
Trigger: ACATGGAAGATTCAGAGATCAAAGGTGAAGTCCTCT...ACAGAAGGAAAGCAGCCCTCCCTCCTTACTGAAAGTCTGGAGAATTGAGAGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552423.1
CDS-3UTR TCA 90 bp TGTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGGAGCTTTCAGCTCCTCTATaGATCGAATCAAATCCGCAG +
Preference number: 4 (lower is better)
Translates to: CSRTWWVLHTFFTGIVLELSAPL*IESNPQ
Trigger: CTGCGGATTTGATTCGATTCATAGAGGAGCTGAAAG...CTCCAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR TCA 90 bp TTGTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGGAAGAGTCTGGATTCCGTaGAGGGTCAAGTGTAGTGTT +
Preference number: 4 (lower is better)
Translates to: LFKNMVGASHLFHWDCAGRVWIP*RVKCSV
Trigger: AACACTACACTTGACCCTTCACGGAATCCAGACTCT...TCCAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR TCA 90 bp AGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGGAGGTGATAAGGAAGAGGATTGAGTaGGAGTTCAGGAGAGCAAAT +
Preference number: 4 (lower is better)
Translates to: RTWWVLHTFFTGIVLEVIRKRIE*EFRRAN
Trigger: ATTTGCTCTCCTGAACTCTCACTCAATCCTCTTCCT...TATCACCTCCAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR GCA 90 bp TCCCAAGGCAATTCAATAGAAGAGGGTAAAACGACTCCAAACATCACTAAGGGCCGTTTAAGACGATGCTaGTTGGAGGCCTTGGCTGTT +
Preference number: 4 (lower is better)
Translates to: SQGNSIEEGKTTPNITKGRLRRC*LEALAV
Trigger: AACAGCCAAGGCCTCCAAGCAGCATCGTCTTAAACG...GCCCTTAGTGATGTTTGGAGTCGTTTTACCCTCTTCTATTGAATTGCCTTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
CDS-3UTR GCA 90 bp TCCCAAGGCAATTCAATAGAAGAGGGTAAAACGACTCCAAACATCACTAAGGGCTCTTCCATCTCTCTCTaGCGTTCTGGATCACCCCTT +
Preference number: 4 (lower is better)
Translates to: SQGNSIEEGKTTPNITKGSSISL*RSGSPL
Trigger: AAGGGGTGATCCAGAACGGCAGAGAGAGATGGAAGA...GCCCTTAGTGATGTTTGGAGTCGTTTTACCCTCTTCTATTGAATTGCCTTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
ENST00000551035.5
CDS-3UTR GCA 90 bp GTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGGAGGAATTCTCCCAGTAACTaGCGTTCATCCTCATCTTCA +
Preference number: 4 (lower is better)
Translates to: VQEHGGCFTPFSLGLCWRNSPSN*RSSSSS
Trigger: TGAAGATGAGGATGAACGGCAGTTACTGGGAGAATT...CCTCCAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR GCA 90 bp AGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGGAGGTGATACAAGAACATGGTGGGTaGTTCACACCTTTTTCACTG +
Preference number: 4 (lower is better)
Translates to: RTWWVLHTFFTGIVLEVIQEHGG*FTPFSL
Trigger: CAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTG...TATCACCTCCAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR GCA 90 bp GTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGGAGGATTTTATCTCCATACTaGTTTGAGTCGGCTTGCCTC +
Preference number: 4 (lower is better)
Translates to: VQEHGGCFTPFSLGLCWRILSPY*FESACL
Trigger: GAGGCAAGCCGACTCAAAGCAGTATGGAGATAAAAT...CCTCCAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR GCA 90 bp CTGAATCTTCCATGTGGTATTGCTGGATGTGGCGTCCATAACAGAATTCATATGGTAAGGAGGGAGGGCTaGTTTCCTTCTGTGACTTGG +
Preference number: 4 (lower is better)
Translates to: LNLPCGIAGCGVHNRIHMVRREG*FPSVTW
Trigger: CCAAGTCACAGAAGGAAAGCAGCCCTCCCTCCTTAC...CATATGAATTCTGTTATGGACGCCACATCCAGCAATACCACATGGAAGATTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552423.1
CDS-3UTR CCA 90 bp AGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGGAGGTGATATCTGAATCTTCCATGTaGTATTGCTGGATGTGGCGT +
Preference number: 4 (lower is better)
Translates to: RTWWVLHTFFTGIVLEVISESSM*YCWMWR
Trigger: ACGCCACATCCAGCAATACCACATGGAAGATTCAGA...TATCACCTCCAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CCA 90 bp AGACTTTCAGTAAGGAGGGAGGGCTGCTTTCCTTCTGTGACTTGGAGAGATATCTCTGAATCTTCCATGTaGTATTGCTGGATGTGGCGT +
Preference number: 4 (lower is better)
Translates to: RLSVRREGCFPSVTWRDISESSM*YCWMWR
Trigger: ACGCCACATCCAGCAATACCACATGGAAGATTCAGA...GATATCTCTCCAAGTCACAGAAGGAAAGCAGCCCTCCCTCCTTACTGAAAGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552423.1
CDS-3UTR CCA 90 bp GGTGATAGGCAGCATTCTACCATTTCCTCAGCAACAGAGGTGAAGGCTCCTCAATCTTTCTCTGTCTCCTaGATGATGTTTTCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: GDRQHSTISSATEVKAPQSFSVS*MMFSSS
Trigger: GGAACTGGAAAACATCATCCAGGAGACAGAGAAAGA...TTGAGGAGCCTTCACCTCTGTTGCTGAGGAAATGGTAGAATGCTGCCTATCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000435406.6
CDS-3UTR CCA 90 bp TCAATAGAAGAGGGTAAAACGACTCCAAACATCACTAAGGGCAGGTGGGGGCCTTCTTTCTCTGTCTCCTaGATGATGTTTTCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: SIEEGKTTPNITKGRWGPSFSVS*MMFSSS
Trigger: GGAACTGGAAAACATCATCCAGGAGACAGAGAAAGA...AGGCCCCCACCTGCCCTTAGTGATGTTTGGAGTCGTTTTACCCTCTTCTATTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000435406.6
ENST00000551035.5
CDS-3UTR CCA 90 bp TCCCAAGGCAATTCAATAGAAGAGGGTAAAACGACTCCAAACATCACTAAGGGCATTTTCCCTGTAGGTTaGGGTGATGGGGGAGGCTTT +
Preference number: 4 (lower is better)
Translates to: SQGNSIEEGKTTPNITKGIFPVG*GDGGGF
Trigger: AAAGCCTCCCCCATCACCCCAACCTACAGGGAAAAT...GCCCTTAGTGATGTTTGGAGTCGTTTTACCCTCTTCTATTGAATTGCCTTGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000389142.9
ENST00000435406.6
ENST00000551035.5
CDS-3UTR CCA 90 bp TCCCAAGGCAATTCAATAGAAGAGGGTAAAACGACTCCAAACATCACTAAGGGCAGTCCCTTCAGCCCATaGGCGGACAATTTTGATCTC +
Preference number: 4 (lower is better)
Translates to: SQGNSIEEGKTTPNITKGSPFSP*ADNFDL
Trigger: GAGATCAAAATTGTCCGCCCATGGGCTGAAGGGACT...GCCCTTAGTGATGTTTGGAGTCGTTTTACCCTCTTCTATTGAATTGCCTTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
ENST00000551035.5
CDS-3UTR CCA 90 bp GATTGTGCTGGAGGTGATAGGCAGCATTCTACCATTTCCTCAGCAACAGAGGTGTGTTCAAGAACATGGTaGGTGCTTCACACCTTTTTC +
Preference number: 4 (lower is better)
Translates to: DCAGGDRQHSTISSATEVCSRTW*VLHTFF
Trigger: GAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACA...CACCTCTGTTGCTGAGGAAATGGTAGAATGCTGCCTATCACCTCCAGCACAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR TCA 90 bp GTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGGAGGTTCACCTTTGATCTCTaGATCTTCCATGTGGTATTG +
Preference number: 4 (lower is better)
Translates to: VQEHGGCFTPFSLGLCWRFTFDL*IFHVVL
Trigger: CAATACCACATGGAAGATTCAGAGATCAAAGGTGAA...CCTCCAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR TCA 90 bp CTTCCACTCTCAATTCTCCAGACTTTCAGTAAGGAGGGAGGGCTGCTTTCCTTCTTCACCTTTGATCTCTaGATCTTCCATGTGGTATTG +
Preference number: 4 (lower is better)
Translates to: LPLSILQTFSKEGGLLSFFTFDL*IFHVVL
Trigger: CAATACCACATGGAAGATTCAGAGATCAAAGGTGAA...GAAGGAAAGCAGCCCTCCCTCCTTACTGAAAGTCTGGAGAATTGAGAGTGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552423.1
CDS-3UTR TCA 90 bp AGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGGAGGTGATAAGAGGACTTCACCTTTaGTCTCTGAATCTTCCATGT +
Preference number: 4 (lower is better)
Translates to: RTWWVLHTFFTGIVLEVIRGLHL*SLNLPC
Trigger: ACATGGAAGATTCAGAGATCAAAGGTGAAGTCCTCT...TATCACCTCCAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
CDS-3UTR TCA 90 bp TTGGTCTCACTCCACACTTGGGGGCCTAGATCTTGCAGCTCCTCTATGATTTTACTTGCAGCTCCTCTATaGTTTTATCTCCATACTGCT +
Preference number: 4 (lower is better)
Translates to: LVSLHTWGPRSCSSSMILLAAPL*FYLHTA
Trigger: AGCAGTATGGAGATAAAATCATAGAGGAGCTGCAAG...TAAAATCATAGAGGAGCTGCAAGATCTAGGCCCCCAAGTGTGGAGTGAGACCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000552787.5
CDS-3UTR TCA 90 bp GATTGTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGCTTTCAGCTCCTCTATaGATCGAATCAAATCCGCAG +
Preference number: 4 (lower is better)
Translates to: DCSRTWWVLHTFFTGIVLLSAPL*IESNPQ
Trigger: CTGCGGATTTGATTCGATTCATAGAGGAGCTGAAAG...CAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR TCA 90 bp TTGTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGGAAGGAAGAGGATTGAGTaGGAGTTCAGGAGAGCAAAT +
Preference number: 4 (lower is better)
Translates to: LFKNMVGASHLFHWDCAGRKRIE*EFRRAN
Trigger: ATTTGCTCTCCTGAACTCTCACTCAATCCTCTTCCT...TCCAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR TCA 90 bp CTGATTGTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCAGGAAGAGGATTGAGTaGGAGTTCAGGAGAGCAAAT +
Preference number: 4 (lower is better)
Translates to: LIVQEHGGCFTPFSLGLCRKRIE*EFRRAN
Trigger: ATTTGCTCTCCTGAACTCTCACTCAATCCTCTTCCT...GCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACAATCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR GCA 90 bp GATTGTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGTGGGGGCCTAGATCTTaGAGCTCCTCTATGATTTTA +
Preference number: 4 (lower is better)
Translates to: DCSRTWWVLHTFFTGIVLWGPRS*SSSMIL
Trigger: TAAAATCATAGAGGAGCTGCAAGATCTAGGCCCCCA...CAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR GCA 90 bp TTGTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGGATGGGGGCCTAGATCTTaGAGCTCCTCTATGATTTTA +
Preference number: 4 (lower is better)
Translates to: LFKNMVGASHLFHWDCAGWGPRS*SSSMIL
Trigger: TAAAATCATAGAGGAGCTGCAAGATCTAGGCCCCCA...TCCAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CCA 90 bp TTGTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGGATCTGAATCTTCCATGTaGTATTGCTGGATGTGGCGT +
Preference number: 4 (lower is better)
Translates to: LFKNMVGASHLFHWDCAGSESSM*YCWMWR
Trigger: ACGCCACATCCAGCAATACCACATGGAAGATTCAGA...TCCAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CCA 90 bp GGTGATAGGCAGCATTCTACCATTTCCTCAGCAACAGAGGTGAAGGCTCCTCAATGTTCTGAAAATCATTaGGAGCACCAGAAGCTGAAT +
Preference number: 4 (lower is better)
Translates to: GDRQHSTISSATEVKAPQCSENH*EHQKLN
Trigger: ATTCAGCTTCTGGTGCTCCCAATGATTTTCAGAACA...TTGAGGAGCCTTCACCTCTGTTGCTGAGGAAATGGTAGAATGCTGCCTATCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CCA 90 bp TCCTCAGCAACAGAGGTGAAGGCTCCTCAACTCAGAAGCACAAATTGTAGGGGATGTTCTGAAAATCATTaGGAGCACCAGAAGCTGAAT +
Preference number: 4 (lower is better)
Translates to: SSATEVKAPQLRSTNCRGCSENH*EHQKLN
Trigger: ATTCAGCTTCTGGTGCTCCCAATGATTTTCAGAACA...TCCCCTACAATTTGTGCTTCTGAGTTGAGGAGCCTTCACCTCTGTTGCTGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CCA 90 bp TGTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGGAGTCTTTCTCTGTCTCCTaGATGATGTTTTCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: CSRTWWVLHTFFTGIVLESFSVS*MMFSSS
Trigger: GGAACTGGAAAACATCATCCAGGAGACAGAGAAAGA...CTCCAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000435406.6
CDS-3UTR CCA 90 bp GATTGTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGTCACACCTTTTTCACTaGGATTGTGCTGGAGGTGAT +
Preference number: 4 (lower is better)
Translates to: DCSRTWWVLHTFFTGIVLSHLFH*DCAGGD
Trigger: ATCACCTCCAGCACAATCCCAGTGAAAAAGGTGTGA...CAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR TCA 90 bp CTGATTGTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCCTTGCAGCTCCTCTATaGTTTTATCTCCATACTGCT +
Preference number: 4 (lower is better)
Translates to: LIVQEHGGCFTPFSLGLCLAAPL*FYLHTA
Trigger: AGCAGTATGGAGATAAAATCATAGAGGAGCTGCAAG...GCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACAATCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR GCA 90 bp TCCCAAGGCAATTCAATAGAAGAGGGTAAAACGACTCCAAACATCACTAAGGGCTGGGGGCCTAGATCTTaGAGCTCCTCTATGATTTTA +
Preference number: 4 (lower is better)
Translates to: SQGNSIEEGKTTPNITKGWGPRS*SSSMIL
Trigger: TAAAATCATAGAGGAGCTGCAAGATCTAGGCCCCCA...GCCCTTAGTGATGTTTGGAGTCGTTTTACCCTCTTCTATTGAATTGCCTTGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
ENST00000551035.5
CDS-3UTR GCA 90 bp TTGTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGGAAATTCTCCCAGTAACTaGCGTTCATCCTCATCTTCA +
Preference number: 4 (lower is better)
Translates to: LFKNMVGASHLFHWDCAGNSPSN*RSSSSS
Trigger: TGAAGATGAGGATGAACGGCAGTTACTGGGAGAATT...TCCAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CCA 90 bp TCCCAAGGCAATTCAATAGAAGAGGGTAAAACGACTCCAAACATCACTAAGGGCTCTGAATCTTCCATGTaGTATTGCTGGATGTGGCGT +
Preference number: 4 (lower is better)
Translates to: SQGNSIEEGKTTPNITKGSESSM*YCWMWR
Trigger: ACGCCACATCCAGCAATACCACATGGAAGATTCAGA...GCCCTTAGTGATGTTTGGAGTCGTTTTACCCTCTTCTATTGAATTGCCTTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
ENST00000551035.5
CDS-3UTR CCA 90 bp TACCATTTCCTCAGCAACAGAGGTGAAGGCTCCTCAACTCAGAAGCACAAATTGTGTTCAAGAACATGGTaGGTGCTTCACACCTTTTTC +
Preference number: 4 (lower is better)
Translates to: YHFLSNRGEGSSTQKHKLCSRTW*VLHTFF
Trigger: GAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACA...CAATTTGTGCTTCTGAGTTGAGGAGCCTTCACCTCTGTTGCTGAGGAAATGGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CCA 90 bp TACCATTTCCTCAGCAACAGAGGTGAAGGCTCCTCAACTCAGAAGCACAAATTGGATTGTTCAAGAACATaGTGGGTGCTTCACACCTTT +
Preference number: 4 (lower is better)
Translates to: YHFLSNRGEGSSTQKHKLDCSRT*WVLHTF
Trigger: AAAGGTGTGAAGCACCCACCATGTTCTTGAACAATC...CAATTTGTGCTTCTGAGTTGAGGAGCCTTCACCTCTGTTGCTGAGGAAATGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CCA 90 bp TTGTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGGAGATTGTTCAAGAACATaGTGGGTGCTTCACACCTTT +
Preference number: 4 (lower is better)
Translates to: LFKNMVGASHLFHWDCAGDCSRT*WVLHTF
Trigger: AAAGGTGTGAAGCACCCACCATGTTCTTGAACAATC...TCCAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR TCA 90 bp TTGTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGGATTCACCTTTGATCTCTaGATCTTCCATGTGGTATTG +
Preference number: 4 (lower is better)
Translates to: LFKNMVGASHLFHWDCAGFTFDL*IFHVVL
Trigger: CAATACCACATGGAAGATTCAGAGATCAAAGGTGAA...TCCAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR TCA 90 bp TACCATTTCCTCAGCAACAGAGGTGAAGGCTCCTCAACTCAGAAGCACAAATTGAGAGGAATTCACCTTTaGTCTCTGAATCTTCCATGT +
Preference number: 4 (lower is better)
Translates to: YHFLSNRGEGSSTQKHKLRGIHL*SLNLPC
Trigger: ACATGGAAGATTCAGAGATCAAAGGTGAATTCCTCT...CAATTTGTGCTTCTGAGTTGAGGAGCCTTCACCTCTGTTGCTGAGGAAATGGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435406.6
CDS-3UTR CCA 90 bp GATTGTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGTGTTCTGAAAATCATTaGGAGCACCAGAAGCTGAAT +
Preference number: 4 (lower is better)
Translates to: DCSRTWWVLHTFFTGIVLCSENH*EHQKLN
Trigger: ATTCAGCTTCTGGTGCTCCCAATGATTTTCAGAACA...CAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR TCA 90 bp TCCCAAGGCAATTCAATAGAAGAGGGTAAAACGACTCCAAACATCACTAAGGGCTTCACCTTTGATCTCTaGATCTTCCATGTGGTATTG +
Preference number: 4 (lower is better)
Translates to: SQGNSIEEGKTTPNITKGFTFDL*IFHVVL
Trigger: CAATACCACATGGAAGATTCAGAGATCAAAGGTGAA...GCCCTTAGTGATGTTTGGAGTCGTTTTACCCTCTTCTATTGAATTGCCTTGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
ENST00000551035.5
CDS-3UTR CCA 90 bp TCCCAAGGCAATTCAATAGAAGAGGGTAAAACGACTCCAAACATCACTAAGGGCTGTTCTGAAAATCATTaGGAGCACCAGAAGCTGAAT +
Preference number: 4 (lower is better)
Translates to: SQGNSIEEGKTTPNITKGCSENH*EHQKLN
Trigger: ATTCAGCTTCTGGTGCTCCCAATGATTTTCAGAACA...GCCCTTAGTGATGTTTGGAGTCGTTTTACCCTCTTCTATTGAATTGCCTTGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
ENST00000551035.5
CDS-3UTR CCA 90 bp CTGAATCTTCCATGTGGTATTGCTGGATGTGGCGTCCATAACAGAATTCATATGTTTCCTTCTGTGACTTaGAGAGATATCTCTAAAGTC +
Preference number: 4 (lower is better)
Translates to: LNLPCGIAGCGVHNRIHMFPSVT*RDISKV
Trigger: GACTTTAGAGATATCTCTCCAAGTCACAGAAGGAAA...CATATGAATTCTGTTATGGACGCCACATCCAGCAATACCACATGGAAGATTCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552423.1
CDS-3UTR CAA 90 bp GGAGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCCTCCGAGACGGAGCTaGGTGACCCGGACCCGGACT +
Preference number: 5 (lower is better)
Translates to: GGGEEASQSRKSLDSVKGPPRRS*VTRTRT
Trigger: AGTCCGGGTCCGGGTCACCAAGCTCCGTCTCGGAGG...ACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315970.12
ENST00000389146.10
CDS-3UTR CAA 90 bp GGCAGGTGGGGGCCTGCTTGCTCAGTGCCTGCTAAGTGTCCTGCCCTCCTTGCTCACCACGTCCGAAGATaGGCTCTGCCCTCCCATGAC +
Preference number: 5 (lower is better)
Translates to: GRWGPACSVPAKCPALLAHHVRR*ALPSHD
Trigger: GTCATGGGAGGGCAGAGCCAATCTTCGGACGTGGTG...AGCAAGGAGGGCAGGACACTTAGCAGGCACTGAGCAAGCAGGCCCCCACCTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
CDS-3UTR CAA 90 bp GGAGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCACCGCCGGTCAGACTaGCGGGTAACAGGAGTCCCA +
Preference number: 5 (lower is better)
Translates to: GGGEEASQSRKSLDSVKGHRRSD*RVTGVP
Trigger: TGGGACTCCTGTTACCCGCAAGTCTGACCGGCGGTG...ACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR CAA 90 bp GGCCTCCCGGGGCCTCCCATTAAGGTCGCACTTGGACCCATTGCCATAGGTCTGGGTGCCACCCCAGACTaGGTCTCACTCCACACTTGG +
Preference number: 5 (lower is better)
Translates to: GLPGPPIKVALGPIAIGLGATPD*VSLHTW
Trigger: CCAAGTGTGGAGTGAGACCAAGTCTGGGGTGGCACC...CAGACCTATGGCAATGGGTCCAAGTGCGACCTTAATGGGAGGCCCCGGGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552787.5
CDS-3UTR CAA 90 bp AGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCACACCGCCGGTCAGACTaGCGGGTAACAGGAGTCCCA +
Preference number: 5 (lower is better)
Translates to: RWGGGKPVQEESGFREGSHRRSD*RVTGVP
Trigger: TGGGACTCCTGTTACCCGCAAGTCTGACCGGCGGTG...TGACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR CAA 90 bp GGAGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCACCACGTCCGAAGATaGGCTCTGCCCTCCCATGAC +
Preference number: 5 (lower is better)
Translates to: GGGEEASQSRKSLDSVKGHHVRR*ALPSHD
Trigger: GTCATGGGAGGGCAGAGCCAATCTTCGGACGTGGTG...ACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR CAA 90 bp GCAGGACAAGGGCTCGTCCACGCGATCGATGTAGTCCCCAGAGATACCTGCACCCACCACGTCCGAAGATaGGCTCTGCCCTCCCATGAC +
Preference number: 5 (lower is better)
Translates to: AGQGLVHAIDVVPRDTCTHHVRR*ALPSHD
Trigger: GTCATGGGAGGGCAGAGCCAATCTTCGGACGTGGTG...GGTGCAGGTATCTCTGGGGACTACATCGATCGCGTGGACGAGCCCTTGTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552787.5
CDS-3UTR CAA 90 bp GGAGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTGGTGCCACCCCAGACTaGGTCTCACTCCACACTTGG +
Preference number: 5 (lower is better)
Translates to: GGGEEASQSRKSLDSVKGGATPD*VSLHTW
Trigger: CCAAGTGTGGAGTGAGACCAAGTCTGGGGTGGCACC...ACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR CAA 90 bp GGAGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCGCACCTGCCATCTTTaGGGGTGCCACCCCAGACTT +
Preference number: 5 (lower is better)
Translates to: GGGEEASQSRKSLDSVKGRTCHL*GCHPRL
Trigger: AAGTCTGGGGTGGCACCCCAAAAGATGGCAGGTGCG...ACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR CAA 90 bp ATCACTAAGGGCAGGTGGGGGCCTGCTTGCTCAGTGCCTGCTAAGTGTCCTGCCTCCTTACTGTCATCCTaGGTCGGGCTCGCACCTGCC +
Preference number: 5 (lower is better)
Translates to: ITKGRWGPACSVPAKCPASLLSS*VGLAPA
Trigger: GGCAGGTGCGAGCCCGACCAAGGATGACAGTAAGGA...GGCAGGACACTTAGCAGGCACTGAGCAAGCAGGCCCCCACCTGCCCTTAGTGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
ENST00000551035.5
CDS-3UTR CAA 90 bp GGAGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTTCCTTACTGTCATCCTaGGTCGGGCTCGCACCTGCC +
Preference number: 5 (lower is better)
Translates to: GGGEEASQSRKSLDSVKGSLLSS*VGLAPA
Trigger: GGCAGGTGCGAGCCCGACCAAGGATGACAGTAAGGA...ACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR CAA 90 bp ATCACTAAGGGCAGGTGGGGGCCTGCTTGCTCAGTGCCTGCTAAGTGTCCTGCCAGTGTCCTGCCCTCCTaGCTCTCTCTACCCACCTCC +
Preference number: 5 (lower is better)
Translates to: ITKGRWGPACSVPAKCPASVLPS*LSLPTS
Trigger: GGAGGTGGGTAGAGAGAGCAAGGAGGGCAGGACACT...GGCAGGACACTTAGCAGGCACTGAGCAAGCAGGCCCCCACCTGCCCTTAGTGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
CDS TCA 90 bp CCGCTCCATGCCAGCCTTCACCTCCGAACGGAGCCGGTCTCGGTCTaGCGGAAGCAGGATCCCTTCCAGTTCCTTCTCAAATTCTCCCAG +
Preference number: 5 (lower is better)
Translates to: PLHASLHLRTEPVSV*RKQDPFQFLLKFSQ
Trigger: CTGGGAGAATTTGAGAAGGAACTGGAAGGGATCCTGCTTCCGTCAGACCGAGACCGGCTCCGTTCGGAGGTGAAGGCTGGCATGGAGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000413095.6
ENST00000435406.6
ENST00000549307.5
ENST00000550202.1
ENST00000551035.5
ENST00000552285.5
CDS-3UTR CAA 90 bp AGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCACACCACGTCCGAAGATaGGCTCTGCCCTCCCATGAC +
Preference number: 5 (lower is better)
Translates to: RWGGGKPVQEESGFREGSHHVRR*ALPSHD
Trigger: GTCATGGGAGGGCAGAGCCAATCTTCGGACGTGGTG...TGACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR CAA 90 bp GGAGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTAGGGATCCCAGGCCCTaGGTAAGCAGGTGTTTCCTC +
Preference number: 5 (lower is better)
Translates to: GGGEEASQSRKSLDSVKGRDPRP*VSRCFL
Trigger: GAGGAAACACCTGCTTACCAAGGGCCTGGGATCCCT...ACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR CAA 90 bp GGCAGGTGGGGGCCTGCTTGCTCAGTGCCTGCTAAGTGTCCTGCCCTCCTTGCTAGGGAGCATCTCTCATaGGGCTCAACAACTCAGGGA +
Preference number: 5 (lower is better)
Translates to: GRWGPACSVPAKCPALLAREHLS*GSTTQG
Trigger: TCCCTGAGTTGTTGAGCCCAATGAGAGATGCTCCCT...AGCAAGGAGGGCAGGACACTTAGCAGGCACTGAGCAAGCAGGCCCCCACCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
CDS-3UTR CAA 90 bp AGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCAGGTGCCACCCCAGACTaGGTCTCACTCCACACTTGG +
Preference number: 5 (lower is better)
Translates to: RWGGGKPVQEESGFREGSGATPD*VSLHTW
Trigger: CCAAGTGTGGAGTGAGACCAAGTCTGGGGTGGCACC...TGACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR CAA 90 bp AGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCACGCACCTGCCATCTTTaGGGGTGCCACCCCAGACTT +
Preference number: 5 (lower is better)
Translates to: RWGGGKPVQEESGFREGSRTCHL*GCHPRL
Trigger: AAGTCTGGGGTGGCACCCCAAAAGATGGCAGGTGCG...TGACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR CAA 90 bp GGCAGGTGGGGGCCTGCTTGCTCAGTGCCTGCTAAGTGTCCTGCCCTCCTTGCTATCCACAGGCTGCTCTaGGCCTATATTTGGCTTCCC +
Preference number: 5 (lower is better)
Translates to: GRWGPACSVPAKCPALLAIHRLL*AYIWLP
Trigger: GGGAAGCCAAATATAGGCCAAGAGCAGCCTGTGGAT...AGCAAGGAGGGCAGGACACTTAGCAGGCACTGAGCAAGCAGGCCCCCACCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
CDS-3UTR CAA 90 bp AGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCAAGTGTCCTGCCCTCCTaGCTCTCTCTACCCACCTCC +
Preference number: 5 (lower is better)
Translates to: RWGGGKPVQEESGFREGSSVLPS*LSLPTS
Trigger: GGAGGTGGGTAGAGAGAGCAAGGAGGGCAGGACACT...TGACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
CDS-3UTR CAA 90 bp GTTCAGGAGAGCAAATATCACAGGCCCGGTGAGGTCTCAAGGTGGCTGCCAGCACACCACGTCCGAAGATaGGCTCTGCCCTCCCATGAC +
Preference number: 5 (lower is better)
Translates to: VQESKYHRPGEVSRWLPAHHVRR*ALPSHD
Trigger: GTCATGGGAGGGCAGAGCCAATCTTCGGACGTGGTG...TGCTGGCAGCCACCTTGAGACCTCACCGGGCCTGTGATATTTGCTCTCCTGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
CDS-3UTR CAA 90 bp AGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCAAGGGATCCCAGGCCCTaGGTAAGCAGGTGTTTCCTC +
Preference number: 5 (lower is better)
Translates to: RWGGGKPVQEESGFREGSRDPRP*VSRCFL
Trigger: GAGGAAACACCTGCTTACCAAGGGCCTGGGATCCCT...TGACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR CAA 90 bp GGAGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTTGCTGCTTGGAGGCCTaGGCTGTTTCATCATCCCAG +
Preference number: 5 (lower is better)
Translates to: GGGEEASQSRKSLDSVKGCCLEA*AVSSSQ
Trigger: CTGGGATGATGAAACAGCCAAGGCCTCCAAGCAGCA...ACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000439210.6
ENST00000552285.5
CDS-3UTR CAA 90 bp GTTCAGGAGAGCAAATATCACAGGCCCGGTGAGGTCTCAAGGTGGCTGCCAGCACGCACCTGCCATCTTTaGGGGTGCCACCCCAGACTT +
Preference number: 5 (lower is better)
Translates to: VQESKYHRPGEVSRWLPARTCHL*GCHPRL
Trigger: AAGTCTGGGGTGGCACCCCAAAAGATGGCAGGTGCG...TGCTGGCAGCCACCTTGAGACCTCACCGGGCCTGTGATATTTGCTCTCCTGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
CDS-3UTR CAA 90 bp GTTCAGGAGAGCAAATATCACAGGCCCGGTGAGGTCTCAAGGTGGCTGCCAGCAAGTGTCCTGCCCTCCTaGCTCTCTCTACCCACCTCC +
Preference number: 5 (lower is better)
Translates to: VQESKYHRPGEVSRWLPASVLPS*LSLPTS
Trigger: GGAGGTGGGTAGAGAGAGCAAGGAGGGCAGGACACT...TGCTGGCAGCCACCTTGAGACCTCACCGGGCCTGTGATATTTGCTCTCCTGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
CDS-3UTR CAA 90 bp GTCCCCAGAGATACCTGCACCCTCGTCACAGAGGAACCGAACCTCGGCCTCCCGGCTGCTTGGAGGCCTTaGATCTCTGAATCTTCCATG +
Preference number: 5 (lower is better)
Translates to: VPRDTCTLVTEEPNLGLPAAWRP*ISESSM
Trigger: CATGGAAGATTCAGAGATCAAAGGCCTCCAAGCAGC...CGGGAGGCCGAGGTTCGGTTCCTCTGTGACGAGGGTGCAGGTATCTCTGGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552787.5
CDS TCA 90 bp TTCAGCTGTGGGTTTTCCCGTTTCATCTCGAGGACAGTCAGATCCTaGTTAGGGCCTCCGAGACGGAGCTTGGTGACCCGGACCCGGACT +
Preference number: 5 (lower is better)
Translates to: FSCGFSRFISRTVRS*LGPPRRSLVTRTRT
Trigger: AGTCCGGGTCCGGGTCACCAAGCTCCGTCTCGGAGGCCCTAATCAGGATCTGACTGTCCTCGAGATGAAACGGGAAAACCCACAGCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315970.12
ENST00000389146.10
ENST00000549307.5
CDS TCA 90 bp CGCCCTAAGCCAGGCAGCGGCCTCAACACGCCCATCGGCGCCACATaGTTTTATTGGCTGTACGTTCTATCCCTCCCACGTACCCTATTC +
Preference number: 5 (lower is better)
Translates to: RPKPGSGLNTPIGAT*FYWLYVLSLPRTLF
Trigger: GAATAGGGTACGTGGGAGGGATAGAACGTACAGCCAATAAAATCATGTGGCGCCGATGGGCGTGTTGAGGCCGCTGCCTGGCTTAGGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549897.1
ENST00000552285.5
CDS-3UTR CAA 90 bp GTTCAGGAGAGCAAATATCACAGGCCCGGTGAGGTCTCAAGGTGGCTGCCAGCAAGGGATCCCAGGCCCTaGGTAAGCAGGTGTTTCCTC +
Preference number: 5 (lower is better)
Translates to: VQESKYHRPGEVSRWLPARDPRP*VSRCFL
Trigger: GAGGAAACACCTGCTTACCAAGGGCCTGGGATCCCT...TGCTGGCAGCCACCTTGAGACCTCACCGGGCCTGTGATATTTGCTCTCCTGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
CDS-3UTR CAA 90 bp GGAGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTAGGGAGCATCTCTCATaGGGCTCAACAACTCAGGGA +
Preference number: 5 (lower is better)
Translates to: GGGEEASQSRKSLDSVKGREHLS*GSTTQG
Trigger: TCCCTGAGTTGTTGAGCCCAATGAGAGATGCTCCCT...ACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR CAA 90 bp ATCACTAAGGGCAGGTGGGGGCCTGCTTGCTCAGTGCCTGCTAAGTGTCCTGCCATGTCCACCAGTCCTTaGTCTTCAGCAAGCAGGGAG +
Preference number: 5 (lower is better)
Translates to: ITKGRWGPACSVPAKCPAMSTSP*SSASRE
Trigger: CTCCCTGCTTGCTGAAGACAAAGGACTGGTGGACAT...GGCAGGACACTTAGCAGGCACTGAGCAAGCAGGCCCCCACCTGCCCTTAGTGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
CDS-3UTR CAA 90 bp GGAGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTATGTCCACCAGTCCTTaGTCTTCAGCAAGCAGGGAG +
Preference number: 5 (lower is better)
Translates to: GGGEEASQSRKSLDSVKGMSTSP*SSASRE
Trigger: CTCCCTGCTTGCTGAAGACAAAGGACTGGTGGACAT...ACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR CAA 90 bp GGCAGGTGGGGGCCTGCTTGCTCAGTGCCTGCTAAGTGTCCTGCCCTCCTTGCTATCTTCCATGTGGTATaGCTGGATGTGGCGTCCATA +
Preference number: 5 (lower is better)
Translates to: GRWGPACSVPAKCPALLAIFHVV*LDVASI
Trigger: TATGGACGCCACATCCAGCAATACCACATGGAAGAT...AGCAAGGAGGGCAGGACACTTAGCAGGCACTGAGCAAGCAGGCCCCCACCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
CDS-3UTR CAA 90 bp AGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCATGCTGCTTGGAGGCCTaGGCTGTTTCATCATCCCAG +
Preference number: 5 (lower is better)
Translates to: RWGGGKPVQEESGFREGSCCLEA*AVSSSQ
Trigger: CTGGGATGATGAAACAGCCAAGGCCTCCAAGCAGCA...TGACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000439210.6
ENST00000552285.5
CDS-3UTR CAA 90 bp GGCAGGTGGGGGCCTGCTTGCTCAGTGCCTGCTAAGTGTCCTGCCCTCCTTGCTTATCTCCATACTGCTTaGAGTCTACGGCTTGCCTCT +
Preference number: 5 (lower is better)
Translates to: GRWGPACSVPAKCPALLAYLHTA*SLRLAS
Trigger: AGAGGCAAGCCGTAGACTCAAAGCAGTATGGAGATA...AGCAAGGAGGGCAGGACACTTAGCAGGCACTGAGCAAGCAGGCCCCCACCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257966.12
ENST00000551035.5
CDS-3UTR CAA 90 bp ATCACTAAGGGCAGGTGGGGGCCTGCTTGCTCAGTGCCTGCTAAGTGTCCTGCCATCCACAGGCTGCTCTaGGCCTATATTTGGCTTCCC +
Preference number: 5 (lower is better)
Translates to: ITKGRWGPACSVPAKCPAIHRLL*AYIWLP
Trigger: GGGAAGCCAAATATAGGCCAAGAGCAGCCTGTGGAT...GGCAGGACACTTAGCAGGCACTGAGCAAGCAGGCCCCCACCTGCCCTTAGTGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
CDS-3UTR CAA 90 bp GGAGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTATCCACAGGCTGCTCTaGGCCTATATTTGGCTTCCC +
Preference number: 5 (lower is better)
Translates to: GGGEEASQSRKSLDSVKGIHRLL*AYIWLP
Trigger: GGGAAGCCAAATATAGGCCAAGAGCAGCCTGTGGAT...ACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR CAA 90 bp GTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGGAGGCCTCCGAGACGGAGCTaGGTGACCCGGACCCGGACT +
Preference number: 5 (lower is better)
Translates to: VQEHGGCFTPFSLGLCWRPPRRS*VTRTRT
Trigger: AGTCCGGGTCCGGGTCACCAAGCTCCGTCTCGGAGG...CCTCCAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315970.12
CDS-3UTR CAA 90 bp GGAGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCACCAGCCCCTCGATTaGTTTCAGCTGTGGGTTTTC +
Preference number: 5 (lower is better)
Translates to: GGGEEASQSRKSLDSVKGHQPLD*FQLWVF
Trigger: GAAAACCCACAGCTGAAACAAATCGAGGGGCTGGTG...ACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315970.12
ENST00000389146.10
CDS-3UTR CAA 90 bp GGGGCAGAGCCGAGGAGTGCGAATGGTCAGCACATAAGAGCAGGACAAGGGCTCTCAATACTTGATCTTTaGCCACCCCCTGCCCCCGTA +
Preference number: 5 (lower is better)
Translates to: GAEPRSANGQHIRAGQGLSILDL*PPPAPV
Trigger: TACGGGGGCAGGGGGTGGCAAAAGATCAAGTATTGA...GAGCCCTTGTCCTGCTCTTATGTGCTGACCATTCGCACTCCTCGGCTCTGCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000552787.5
CDS TCA 90 bp TGGGTCCAGCTCTTTCTCTGTCTCCGAACGGAGCCGGTCTCGGTCTaGCGGAAGCAGGATCCCTTCCAGTTCCTTCTCAAATTCTCCCAG +
Preference number: 5 (lower is better)
Translates to: WVQLFLCLRTEPVSV*RKQDPFQFLLKFSQ
Trigger: CTGGGAGAATTTGAGAAGGAACTGGAAGGGATCCTGCTTCCGTCAGACCGAGACCGGCTCCGTTCGGAGACAGAGAAAGAGCTGGACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389142.9
ENST00000389146.10
ENST00000439210.6
CDS GCA 90 bp ACTGGACAGCAGCGTTTCCGCCGCCATCTTTCGTTCCCCTTCTTATaGAGAGAATCTGTTTCCGCCCTAAGCCAGGCAGCGGCCTCAACA +
Preference number: 5 (lower is better)
Translates to: TGQQRFRRHLSFPFL*RESVSALSQAAAST
Trigger: TGTTGAGGCCGCTGCCTGGCTTAGGGCGGAAACAGATTCTCTGCATAAGAAGGGGAACGAAAGATGGCGGCGGAAACGCTGCTGTCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549897.1
ENST00000552285.5
CDS GCA 90 bp GGACAAGGGCTCGTCCACGCGATCGATGTAGTCCCCAGAGATACCTaGACCCTCGTCACAGAGGAACTTGGCTGTTTCATCATCCCAGTC +
Preference number: 5 (lower is better)
Translates to: GQGLVHAIDVVPRDT*TLVTEELGCFIIPV
Trigger: GACTGGGATGATGAAACAGCCAAGTTCCTCTGTGACGAGGGTGCAGGTATCTCTGGGGACTACATCGATCGCGTGGACGAGCCCTTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551035.5
CDS-3UTR CAA 90 bp AGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCAAGGGAGCATCTCTCATaGGGCTCAACAACTCAGGGA +
Preference number: 5 (lower is better)
Translates to: RWGGGKPVQEESGFREGSREHLS*GSTTQG
Trigger: TCCCTGAGTTGTTGAGCCCAATGAGAGATGCTCCCT...TGACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR CAA 90 bp GGTCAGCACATAAGAGCAGGACAAGGGCTCGTCCACGCGATCGATGTAGTCCCCAGGGAGCATCTCTCATaGGGCTCAACAACTCAGGGA +
Preference number: 5 (lower is better)
Translates to: GQHIRAGQGLVHAIDVVPREHLS*GSTTQG
Trigger: TCCCTGAGTTGTTGAGCCCAATGAGAGATGCTCCCT...GGGGACTACATCGATCGCGTGGACGAGCCCTTGTCCTGCTCTTATGTGCTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552787.5
CDS-3UTR CAA 90 bp AGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCAATGTCCACCAGTCCTTaGTCTTCAGCAAGCAGGGAG +
Preference number: 5 (lower is better)
Translates to: RWGGGKPVQEESGFREGSMSTSP*SSASRE
Trigger: CTCCCTGCTTGCTGAAGACAAAGGACTGGTGGACAT...TGACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR CAA 90 bp CTCAGGGATCCCAGGCCCTTGGTAAGCAGGTGTTTCCTCCTCCCTTTCACGCTGATGTCCACCAGTCCTTaGTCTTCAGCAAGCAGGGAG +
Preference number: 5 (lower is better)
Translates to: LRDPRPLVSRCFLLPFTLMSTSP*SSASRE
Trigger: CTCCCTGCTTGCTGAAGACAAAGGACTGGTGGACAT...CAGCGTGAAAGGGAGGAGGAAACACCTGCTTACCAAGGGCCTGGGATCCCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000550848.5
ENST00000551285.5
CDS-3UTR CAA 90 bp GTTCAGGAGAGCAAATATCACAGGCCCGGTGAGGTCTCAAGGTGGCTGCCAGCATGCTGCTTGGAGGCCTaGGCTGTTTCATCATCCCAG +
Preference number: 5 (lower is better)
Translates to: VQESKYHRPGEVSRWLPACCLEA*AVSSSQ
Trigger: CTGGGATGATGAAACAGCCAAGGCCTCCAAGCAGCA...TGCTGGCAGCCACCTTGAGACCTCACCGGGCCTGTGATATTTGCTCTCCTGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000439210.6
CDS-3UTR CAA 90 bp GGAGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTTTAAGACGATGCTGCTaGGAGGCCTTGGCTGTTTCA +
Preference number: 5 (lower is better)
Translates to: GGGEEASQSRKSLDSVKGLRRCC*EALAVS
Trigger: TGAAACAGCCAAGGCCTCCAAGCAGCATCGTCTTAA...ACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000439210.6
ENST00000552285.5
CDS-3UTR CAA 90 bp AAGGCTCCTCAACTCAGAAGCACAAATTGTAGGGGACAGGGTGGGCAGGGAAAGGGTGCCACCCCAGACTaGGTCTCACTCCACACTTGG +
Preference number: 5 (lower is better)
Translates to: KAPQLRSTNCRGQGGQGKGATPD*VSLHTW
Trigger: CCAAGTGTGGAGTGAGACCAAGTCTGGGGTGGCACC...CTTTCCCTGCCCACCCTGTCCCCTACAATTTGTGCTTCTGAGTTGAGGAGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CAA 90 bp AAGGCTCCTCAACTCAGAAGCACAAATTGTAGGGGACAGGGTGGGCAGGGAAAGCGCACCTGCCATCTTTaGGGGTGCCACCCCAGACTT +
Preference number: 5 (lower is better)
Translates to: KAPQLRSTNCRGQGGQGKRTCHL*GCHPRL
Trigger: AAGTCTGGGGTGGCACCCCAAAAGATGGCAGGTGCG...CTTTCCCTGCCCACCCTGTCCCCTACAATTTGTGCTTCTGAGTTGAGGAGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CAA 90 bp AGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCAATCCACAGGCTGCTCTaGGCCTATATTTGGCTTCCC +
Preference number: 5 (lower is better)
Translates to: RWGGGKPVQEESGFREGSIHRLL*AYIWLP
Trigger: GGGAAGCCAAATATAGGCCAAGAGCAGCCTGTGGAT...TGACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR CAA 90 bp GGCAGGTGGGGGCCTGCTTGCTCAGTGCCTGCTAAGTGTCCTGCCCTCCTTGCTTTGAAGAAGATCTCCTaGAGGTTTCTCGTGTCCTCA +
Preference number: 5 (lower is better)
Translates to: GRWGPACSVPAKCPALLALKKIS*RFLVSS
Trigger: TGAGGACACGAGAAACCTCAAGGAGATCTTCTTCAA...AGCAAGGAGGGCAGGACACTTAGCAGGCACTGAGCAAGCAGGCCCCCACCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
CDS-3UTR CAA 90 bp ATCACTAAGGGCAGGTGGGGGCCTGCTTGCTCAGTGCCTGCTAAGTGTCCTGCCCCCGGCACCAAGATATaGAAGAAGATCTCCTTGAGG +
Preference number: 5 (lower is better)
Translates to: ITKGRWGPACSVPAKCPAPGTKI*KKISLR
Trigger: CCTCAAGGAGATCTTCTTCAATATCTTGGTGCCGGG...GGCAGGACACTTAGCAGGCACTGAGCAAGCAGGCCCCCACCTGCCCTTAGTGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
CDS-3UTR CAA 90 bp GGAGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCCCGGCACCAAGATATaGAAGAAGATCTCCTTGAGG +
Preference number: 5 (lower is better)
Translates to: GGGEEASQSRKSLDSVKGPGTKI*KKISLR
Trigger: CCTCAAGGAGATCTTCTTCAATATCTTGGTGCCGGG...ACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR CAA 90 bp GGCAGGTGGGGGCCTGCTTGCTCAGTGCCTGCTAAGTGTCCTGCCCTCCTTGCTGGGTCAAGTGTAGTGTaGGTCTCAGAAGTCAAATTC +
Preference number: 5 (lower is better)
Translates to: GRWGPACSVPAKCPALLAGSSVV*VSEVKF
Trigger: GAATTTGACTTCTGAGACCAACACTACACTTGACCC...AGCAAGGAGGGCAGGACACTTAGCAGGCACTGAGCAAGCAGGCCCCCACCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
CDS CCA 90 bp GGACCCATTGCCATAGGTCTTCAGCAAGCAGGGAGCATCTCTCATTaGGCTCAACAACTCAGGGATCCCAGGCCCTTGGTAAGCAGGTGT +
Preference number: 5 (lower is better)
Translates to: GPIAIGLQQAGSISH*AQQLRDPRPLVSRC
Trigger: ACACCTGCTTACCAAGGGCCTGGGATCCCTGAGTTGTTGAGCCCAATGAGAGATGCTCCCTGCTTGCTGAAGACCTATGGCAATGGGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550372.5
CDS-3UTR CAA 90 bp TCCTCAGCAACAGAGGTGAAGGCTCCTCAACTCAGAAGCACAAATTGTAGGGGACACCGCCGGTCAGACTaGCGGGTAACAGGAGTCCCA +
Preference number: 5 (lower is better)
Translates to: SSATEVKAPQLRSTNCRGHRRSD*RVTGVP
Trigger: TGGGACTCCTGTTACCCGCAAGTCTGACCGGCGGTG...TCCCCTACAATTTGTGCTTCTGAGTTGAGGAGCCTTCACCTCTGTTGCTGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CAA 90 bp AGGCCCTTGGTAAGCAGGTGTTTCCTCCTCCCTTTCACGCTGGAAGTGAATAGCAGGGATCCCAGGCCCTaGGTAAGCAGGTGTTTCCTC +
Preference number: 5 (lower is better)
Translates to: RPLVSRCFLLPFTLEVNSRDPRP*VSRCFL
Trigger: GAGGAAACACCTGCTTACCAAGGGCCTGGGATCCCT...GCTATTCACTTCCAGCGTGAAAGGGAGGAGGAAACACCTGCTTACCAAGGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000550848.5
ENST00000551285.5
CDS-3UTR CAA 90 bp GTTCAGGAGAGCAAATATCACAGGCCCGGTGAGGTCTCAAGGTGGCTGCCAGCAAGGGAGCATCTCTCATaGGGCTCAACAACTCAGGGA +
Preference number: 5 (lower is better)
Translates to: VQESKYHRPGEVSRWLPAREHLS*GSTTQG
Trigger: TCCCTGAGTTGTTGAGCCCAATGAGAGATGCTCCCT...TGCTGGCAGCCACCTTGAGACCTCACCGGGCCTGTGATATTTGCTCTCCTGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
CDS-3UTR CAA 90 bp CCTCCCATTAAGGTCGCACTTGGACCCATTGCCATAGGTCTGGCTGTGGTAGCGATGTCCACCAGTCCTTaGTCTTCAGCAAGCAGGGAG +
Preference number: 5 (lower is better)
Translates to: PPIKVALGPIAIGLAVVAMSTSP*SSASRE
Trigger: CTCCCTGCTTGCTGAAGACAAAGGACTGGTGGACAT...CGCTACCACAGCCAGACCTATGGCAATGGGTCCAAGTGCGACCTTAATGGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552787.5
CDS-3UTR CAA 90 bp ATCACTAAGGGCAGGTGGGGGCCTGCTTGCTCAGTGCCTGCTAAGTGTCCTGCCATCTTCCATGTGGTATaGCTGGATGTGGCGTCCATA +
Preference number: 5 (lower is better)
Translates to: ITKGRWGPACSVPAKCPAIFHVV*LDVASI
Trigger: TATGGACGCCACATCCAGCAATACCACATGGAAGAT...GGCAGGACACTTAGCAGGCACTGAGCAAGCAGGCCCCCACCTGCCCTTAGTGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
CDS-3UTR CAA 90 bp GGAGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTATCTTCCATGTGGTATaGCTGGATGTGGCGTCCATA +
Preference number: 5 (lower is better)
Translates to: GGGEEASQSRKSLDSVKGIFHVV*LDVASI
Trigger: TATGGACGCCACATCCAGCAATACCACATGGAAGAT...ACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR CAA 90 bp GGAGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTTTGGCTTCCCCTTTTTaGTTCCACCTTTCAGCTCCT +
Preference number: 5 (lower is better)
Translates to: GGGEEASQSRKSLDSVKGLASPF*FHLSAP
Trigger: AGGAGCTGAAAGGTGGAACAAAAAAGGGGAAGCCAA...ACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR CAA 90 bp GTTCAGGAGAGCAAATATCACAGGCCCGGTGAGGTCTCAAGGTGGCTGCCAGCAATCCACAGGCTGCTCTaGGCCTATATTTGGCTTCCC +
Preference number: 5 (lower is better)
Translates to: VQESKYHRPGEVSRWLPAIHRLL*AYIWLP
Trigger: GGGAAGCCAAATATAGGCCAAGAGCAGCCTGTGGAT...TGCTGGCAGCCACCTTGAGACCTCACCGGGCCTGTGATATTTGCTCTCCTGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
CDS-3UTR CAA 90 bp AGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCACCCGGCACCAAGATATaGAAGAAGATCTCCTTGAGG +
Preference number: 5 (lower is better)
Translates to: RWGGGKPVQEESGFREGSPGTKI*KKISLR
Trigger: CCTCAAGGAGATCTTCTTCAATATCTTGGTGCCGGG...TGACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR CAA 90 bp GAGCATCTCTCATTGGGCTCAACAACTCAGGGATCCCAGGCCCTTGGTAAGCAGCACCACGTCCGAAGATaGGCTCTGGGAAAGAAGGGA +
Preference number: 5 (lower is better)
Translates to: EHLSLGSTTQGSQALGKQHHVRR*ALGKKG
Trigger: TCCCTTCTTTCCCAGAGCCAATCTTCGGACGTGGTG...CTGCTTACCAAGGGCCTGGGATCCCTGAGTTGTTGAGCCCAATGAGAGATGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000550848.5
ENST00000551285.5
CDS TCA 90 bp TTTGTTGAGAGTGGATGTGAGAGCCAGCATTGCCCGATCCCGCTCTaGCTCCTTCTTCAGCCCATCTGGGTCCAGCTCTTTCTCTGTCTC +
Preference number: 5 (lower is better)
Translates to: FVESGCESQHCPIPL*LLLQPIWVQLFLCL
Trigger: GAGACAGAGAAAGAGCTGGACCCAGATGGGCTGAAGAAGGAGTCAGAGCGGGATCGGGCAATGCTGGCTCTCACATCCACTCTCAACAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000549307.5
ENST00000550202.1
ENST00000551035.5
ENST00000552285.5
CDS CCA 90 bp GACTTGCGGGTAACAGGAGTCCCAGAAGCAGCAGTCCTAACAAACTaGACAGCAGCGTTTCCGCCGCCATCTTTCGTTCCCCTTCTTATG +
Preference number: 5 (lower is better)
Translates to: DLRVTGVPEAAVLTN*TAAFPPPSFVPLLM
Trigger: CATAAGAAGGGGAACGAAAGATGGCGGCGGAAACGCTGCTGTCCAGTTTGTTAGGACTGCTGCTTCTGGGACTCCTGTTACCCGCAAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315970.12
ENST00000547079.5
ENST00000549897.1
ENST00000550848.5
ENST00000552285.5
ENST00000552787.5
CDS-3UTR CAA 90 bp AGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGGAGGTGATACACCGCCGGTCAGACTaGCGGGTAACAGGAGTCCCA +
Preference number: 5 (lower is better)
Translates to: RTWWVLHTFFTGIVLEVIHRRSD*RVTGVP
Trigger: TGGGACTCCTGTTACCCGCAAGTCTGACCGGCGGTG...TATCACCTCCAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CAA 90 bp AGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCAATCTTCCATGTGGTATaGCTGGATGTGGCGTCCATA +
Preference number: 5 (lower is better)
Translates to: RWGGGKPVQEESGFREGSIFHVV*LDVASI
Trigger: TATGGACGCCACATCCAGCAATACCACATGGAAGAT...TGACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR CAA 90 bp CTCAGGGATCCCAGGCCCTTGGTAAGCAGGTGTTTCCTCCTCCCTTTCACGCTGATCTTCCATGTGGTATaGCTGGATGTGGCGTCCATA +
Preference number: 5 (lower is better)
Translates to: LRDPRPLVSRCFLLPFTLIFHVV*LDVASI
Trigger: TATGGACGCCACATCCAGCAATACCACATGGAAGAT...CAGCGTGAAAGGGAGGAGGAAACACCTGCTTACCAAGGGCCTGGGATCCCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000550848.5
ENST00000551285.5
CDS-3UTR CAA 90 bp AAGGCTCCTCAACTCAGAAGCACAAATTGTAGGGGACAGGGTGGGCAGGGAAAGTGCTGCTTGGAGGCCTaGGCTGTTTCATCATCCCAG +
Preference number: 5 (lower is better)
Translates to: KAPQLRSTNCRGQGGQGKCCLEA*AVSSSQ
Trigger: CTGGGATGATGAAACAGCCAAGGCCTCCAAGCAGCA...CTTTCCCTGCCCACCCTGTCCCCTACAATTTGTGCTTCTGAGTTGAGGAGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
CDS-3UTR CAA 90 bp GGTGATAGGCAGCATTCTACCATTTCCTCAGCAACAGAGGTGAAGGCTCCTCAAGGTGCCACCCCAGACTaGGTCTCACTCCACACTTGG +
Preference number: 5 (lower is better)
Translates to: GDRQHSTISSATEVKAPQGATPD*VSLHTW
Trigger: CCAAGTGTGGAGTGAGACCAAGTCTGGGGTGGCACC...TTGAGGAGCCTTCACCTCTGTTGCTGAGGAAATGGTAGAATGCTGCCTATCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CAA 90 bp GATTGTGCTGGAGGTGATAGGCAGCATTCTACCATTTCCTCAGCAACAGAGGTGGGTGCCACCCCAGACTaGGTCTCACTCCACACTTGG +
Preference number: 5 (lower is better)
Translates to: DCAGGDRQHSTISSATEVGATPD*VSLHTW
Trigger: CCAAGTGTGGAGTGAGACCAAGTCTGGGGTGGCACC...CACCTCTGTTGCTGAGGAAATGGTAGAATGCTGCCTATCACCTCCAGCACAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CAA 90 bp TCCTCAGCAACAGAGGTGAAGGCTCCTCAACTCAGAAGCACAAATTGTAGGGGATCCTTACTGTCATCCTaGGTCGGGCTCGCACCTGCC +
Preference number: 5 (lower is better)
Translates to: SSATEVKAPQLRSTNCRGSLLSS*VGLAPA
Trigger: GGCAGGTGCGAGCCCGACCAAGGATGACAGTAAGGA...TCCCCTACAATTTGTGCTTCTGAGTTGAGGAGCCTTCACCTCTGTTGCTGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CAA 90 bp TCAATAGAAGAGGGTAAAACGACTCCAAACATCACTAAGGGCAGGTGGGGGCCTTCCTTACTGTCATCCTaGGTCGGGCTCGCACCTGCC +
Preference number: 5 (lower is better)
Translates to: SIEEGKTTPNITKGRWGPSLLSS*VGLAPA
Trigger: GGCAGGTGCGAGCCCGACCAAGGATGACAGTAAGGA...AGGCCCCCACCTGCCCTTAGTGATGTTTGGAGTCGTTTTACCCTCTTCTATTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
ENST00000551035.5
CDS-3UTR CAA 90 bp AGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCATTGGCTTCCCCTTTTTaGTTCCACCTTTCAGCTCCT +
Preference number: 5 (lower is better)
Translates to: RWGGGKPVQEESGFREGSLASPF*FHLSAP
Trigger: AGGAGCTGAAAGGTGGAACAAAAAAGGGGAAGCCAA...TGACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR CAA 90 bp GGCAGGTGGGGGCCTGCTTGCTCAGTGCCTGCTAAGTGTCCTGCCCTCCTTGCTAGTCTTTTGATGAGTTaGTTGAGAGTGGATGTGAGA +
Preference number: 5 (lower is better)
Translates to: GRWGPACSVPAKCPALLASLLMS*LRVDVR
Trigger: TCTCACATCCACTCTCAACAAACTCATCAAAAGACT...AGCAAGGAGGGCAGGACACTTAGCAGGCACTGAGCAAGCAGGCCCCCACCTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
CDS-3UTR CAA 90 bp GGCAGGTGGGGGCCTGCTTGCTCAGTGCCTGCTAAGTGTCCTGCCCTCCTTGCTTTTTCCTCCAGTCTTTaGATGAGTTTGTTGAGAGTG +
Preference number: 5 (lower is better)
Translates to: GRWGPACSVPAKCPALLAFSSSL*MSLLRV
Trigger: CACTCTCAACAAACTCATCAAAAGACTGGAGGAAAA...AGCAAGGAGGGCAGGACACTTAGCAGGCACTGAGCAAGCAGGCCCCCACCTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000551035.5
CDS-3UTR CAA 90 bp GGAGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTTTGAAGAAGATCTCCTaGAGGTTTCTCGTGTCCTCA +
Preference number: 5 (lower is better)
Translates to: GGGEEASQSRKSLDSVKGLKKIS*RFLVSS
Trigger: TGAGGACACGAGAAACCTCAAGGAGATCTTCTTCAA...ACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR CAA 90 bp GGAGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTGGGTCAAGTGTAGTGTaGGTCTCAGAAGTCAAATTC +
Preference number: 5 (lower is better)
Translates to: GGGEEASQSRKSLDSVKGGSSVV*VSEVKF
Trigger: GAATTTGACTTCTGAGACCAACACTACACTTGACCC...ACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR CAA 90 bp GGTGATAGGCAGCATTCTACCATTTCCTCAGCAACAGAGGTGAAGGCTCCTCAAAGTGTCCTGCCCTCCTaGCTCTCTCTACCCACCTCC +
Preference number: 5 (lower is better)
Translates to: GDRQHSTISSATEVKAPQSVLPS*LSLPTS
Trigger: GGAGGTGGGTAGAGAGAGCAAGGAGGGCAGGACACT...TTGAGGAGCCTTCACCTCTGTTGCTGAGGAAATGGTAGAATGCTGCCTATCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CAA 90 bp AGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCATATCTCCATACTGCTTaGAGTCGGCTTGCCTCTGAA +
Preference number: 5 (lower is better)
Translates to: RWGGGKPVQEESGFREGSYLHTA*SRLASE
Trigger: TTCAGAGGCAAGCCGACTCAAAGCAGTATGGAGATA...TGACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000435406.6
ENST00000439210.6
ENST00000552285.5
CDS-3UTR CAA 90 bp GGAGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCGCCACATGATTTTATaGGCTGTACGTTCTATCCCT +
Preference number: 5 (lower is better)
Translates to: GGGEEASQSRKSLDSVKGRHMIL*AVRSIP
Trigger: AGGGATAGAACGTACAGCCAATAAAATCATGTGGCG...ACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552285.5
CDS GCA 90 bp TCTATCCAAGCTATTGGCTCATGTGCAGCTGGGCTCTCCTATTCATaGCCTGACAGCTGGGGCCTCTCTTGGTGCAAAGTCCTAAAGTGG +
Preference number: 5 (lower is better)
Translates to: SIQAIGSCAAGLSYS*PDSWGLSWCKVLKW
Trigger: CCACTTTAGGACTTTGCACCAAGAGAGGCCCCAGCTGTCAGGGCATGAATAGGAGAGCCCAGCTGCACATGAGCCAATAGCTTGGATAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549307.5
CDS CCA 90 bp CTCATCAGTCAGCCAACGTGCACCCTCTTCAGTCCCTTCAGCCCATaGGCGGACAATTTTGATCTCAATTTTCCCTGCAGCTGTGAGTCC +
Preference number: 5 (lower is better)
Translates to: LISQPTCTLFSPFSP*ADNFDLNFPCSCES
Trigger: GGACTCACAGCTGCAGGGAAAATTGAGATCAAAATTGTCCGCCCATGGGCTGAAGGGACTGAAGAGGGTGCACGTTGGCTGACTGATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315970.12
ENST00000389146.10
ENST00000549307.5
CDS-3UTR CAA 90 bp CTGATTGTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCCACCGCCGGTCAGACTaGCGGGTAACAGGAGTCCCA +
Preference number: 5 (lower is better)
Translates to: LIVQEHGGCFTPFSLGLCHRRSD*RVTGVP
Trigger: TGGGACTCCTGTTACCCGCAAGTCTGACCGGCGGTG...GCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACAATCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CAA 90 bp TCCTCAGCAACAGAGGTGAAGGCTCCTCAACTCAGAAGCACAAATTGTAGGGGAAGGGATCCCAGGCCCTaGGTAAGCAGGTGTTTCCTC +
Preference number: 5 (lower is better)
Translates to: SSATEVKAPQLRSTNCRGRDPRP*VSRCFL
Trigger: GAGGAAACACCTGCTTACCAAGGGCCTGGGATCCCT...TCCCCTACAATTTGTGCTTCTGAGTTGAGGAGCCTTCACCTCTGTTGCTGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CAA 90 bp GGTGATAGGCAGCATTCTACCATTTCCTCAGCAACAGAGGTGAAGGCTCCTCAAAGGGATCCCAGGCCCTaGGTAAGCAGGTGTTTCCTC +
Preference number: 5 (lower is better)
Translates to: GDRQHSTISSATEVKAPQRDPRP*VSRCFL
Trigger: GAGGAAACACCTGCTTACCAAGGGCCTGGGATCCCT...TTGAGGAGCCTTCACCTCTGTTGCTGAGGAAATGGTAGAATGCTGCCTATCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CAA 90 bp GATTGTGCTGGAGGTGATAGGCAGCATTCTACCATTTCCTCAGCAACAGAGGTGAGGGATCCCAGGCCCTaGGTAAGCAGGTGTTTCCTC +
Preference number: 5 (lower is better)
Translates to: DCAGGDRQHSTISSATEVRDPRP*VSRCFL
Trigger: GAGGAAACACCTGCTTACCAAGGGCCTGGGATCCCT...CACCTCTGTTGCTGAGGAAATGGTAGAATGCTGCCTATCACCTCCAGCACAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CAA 90 bp TCTCATTGGGCTCAACAACTCAGGGATCCCAGGCCCTTGGTAAGCAGGTGTTTCAGGGAGCATCTCTCATaGGGCTCAACAACTCAGGGA +
Preference number: 5 (lower is better)
Translates to: SHWAQQLRDPRPLVSRCFREHLS*GSTTQG
Trigger: TCCCTGAGTTGTTGAGCCCAATGAGAGATGCTCCCT...GAAACACCTGCTTACCAAGGGCCTGGGATCCCTGAGTTGTTGAGCCCAATGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000550848.5
ENST00000551285.5
CDS-3UTR CAA 90 bp GTTCAGGAGAGCAAATATCACAGGCCCGGTGAGGTCTCAAGGTGGCTGCCAGCAATCTTCCATGTGGTATaGCTGGATGTGGCGTCCATA +
Preference number: 5 (lower is better)
Translates to: VQESKYHRPGEVSRWLPAIFHVV*LDVASI
Trigger: TATGGACGCCACATCCAGCAATACCACATGGAAGAT...TGCTGGCAGCCACCTTGAGACCTCACCGGGCCTGTGATATTTGCTCTCCTGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
CDS-3UTR CAA 90 bp TGTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGGAGCGCACCTGCCATCTTTaGGGGTGCCACCCCAGACTT +
Preference number: 5 (lower is better)
Translates to: CSRTWWVLHTFFTGIVLERTCHL*GCHPRL
Trigger: AAGTCTGGGGTGGCACCCCAAAAGATGGCAGGTGCG...CTCCAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CAA 90 bp GTTCAGGAGAGCAAATATCACAGGCCCGGTGAGGTCTCAAGGTGGCTGCCAGCATTGGCTTCCCCTTTTTaGTTCCACCTTTCAGCTCCT +
Preference number: 5 (lower is better)
Translates to: VQESKYHRPGEVSRWLPALASPF*FHLSAP
Trigger: AGGAGCTGAAAGGTGGAACAAAAAAGGGGAAGCCAA...TGCTGGCAGCCACCTTGAGACCTCACCGGGCCTGTGATATTTGCTCTCCTGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
CDS-3UTR CAA 90 bp AGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCATTGAAGAAGATCTCCTaGAGGTTTCTCGTGTCCTCA +
Preference number: 5 (lower is better)
Translates to: RWGGGKPVQEESGFREGSLKKIS*RFLVSS
Trigger: TGAGGACACGAGAAACCTCAAGGAGATCTTCTTCAA...TGACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR CAA 90 bp AGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCAGGGTCAAGTGTAGTGTaGGTCTCAGAAGTCAAATTC +
Preference number: 5 (lower is better)
Translates to: RWGGGKPVQEESGFREGSGSSVV*VSEVKF
Trigger: GAATTTGACTTCTGAGACCAACACTACACTTGACCC...TGACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR CAA 90 bp CCCCAGACTTGGTCTCACTCCACACTTGGGGGCCTAGATCTTGCAGCTCCTCTACCAGCTATTCAATACTaGATCTTTTGCCACCCCCTG +
Preference number: 5 (lower is better)
Translates to: PQTWSHSTLGGLDLAAPLPAIQY*IFCHPL
Trigger: CAGGGGGTGGCAAAAGATCAAGTATTGAATAGCTGG...TAGAGGAGCTGCAAGATCTAGGCCCCCAAGTGTGGAGTGAGACCAAGTCTGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000552787.5
CDS GCA 90 bp GAAGATCTCCTTGAGGTTTCTCGTGTCCTCATCAGTCAGCCAACGTaGACCCTCTTCAGTCCCTTCAGCCCATGGGCGGACAATTTTGAT +
Preference number: 5 (lower is better)
Translates to: EDLLEVSRVLISQPT*TLFSPFSPWADNFD
Trigger: ATCAAAATTGTCCGCCCATGGGCTGAAGGGACTGAAGAGGGTGCACGTTGGCTGACTGATGAGGACACGAGAAACCTCAAGGAGATCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000546916.1
ENST00000549307.5
ENST00000551035.5
ENST00000552285.5
CDS-3UTR CAA 90 bp TACCATTTCCTCAGCAACAGAGGTGAAGGCTCCTCAACTCAGAAGCACAAATTGCACCACGTCCGAAGATaGGCTCTGCCCTCCCATGAC +
Preference number: 5 (lower is better)
Translates to: YHFLSNRGEGSSTQKHKLHHVRR*ALPSHD
Trigger: GTCATGGGAGGGCAGAGCCAATCTTCGGACGTGGTG...CAATTTGTGCTTCTGAGTTGAGGAGCCTTCACCTCTGTTGCTGAGGAAATGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CAA 90 bp TTGTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGGACACCACGTCCGAAGATaGGCTCTGCCCTCCCATGAC +
Preference number: 5 (lower is better)
Translates to: LFKNMVGASHLFHWDCAGHHVRR*ALPSHD
Trigger: GTCATGGGAGGGCAGAGCCAATCTTCGGACGTGGTG...TCCAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CAA 90 bp ACTTCACCTTTGATCTCTGAATCTTCCATGTGGTATTGCTGGATGTGGCGTCCACACCACGTCCGAAGATaGGCTCTGCCCTCCCATGAC +
Preference number: 5 (lower is better)
Translates to: TSPLISESSMWYCWMWRPHHVRR*ALPSHD
Trigger: GTCATGGGAGGGCAGAGCCAATCTTCGGACGTGGTG...TGGACGCCACATCCAGCAATACCACATGGAAGATTCAGAGATCAAAGGTGAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552423.1
CDS-3UTR CAA 90 bp ACTGCTTTGAGTCTACTGAGAAACAGCATGCAAGCAGGCCAGGAACACATTCCTAGGGATCCCAGGCCCTaGGTAAGCAGGTGTTTCCTC +
Preference number: 5 (lower is better)
Translates to: TALSLLRNSMQAGQEHIPRDPRP*VSRCFL
Trigger: GAGGAAACACCTGCTTACCAAGGGCCTGGGATCCCT...AGGAATGTGTTCCTGGCCTGCTTGCATGCTGTTTCTCAGTAGACTCAAAGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552787.5
CDS-3UTR CAA 90 bp GGTGATAGGCAGCATTCTACCATTTCCTCAGCAACAGAGGTGAAGGCTCCTCAATGCTGCTTGGAGGCCTaGGCTGTTTCATCATCCCAG +
Preference number: 5 (lower is better)
Translates to: GDRQHSTISSATEVKAPQCCLEA*AVSSSQ
Trigger: CTGGGATGATGAAACAGCCAAGGCCTCCAAGCAGCA...TTGAGGAGCCTTCACCTCTGTTGCTGAGGAAATGGTAGAATGCTGCCTATCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
CDS-3UTR CAA 90 bp TTGTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGGATCCTTACTGTCATCCTaGGTCGGGCTCGCACCTGCC +
Preference number: 5 (lower is better)
Translates to: LFKNMVGASHLFHWDCAGSLLSS*VGLAPA
Trigger: GGCAGGTGCGAGCCCGACCAAGGATGACAGTAAGGA...TCCAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CAA 90 bp GGAGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTTTTTCCTCCAGTCTTTaGATGAGTTTGTTGAGAGTG +
Preference number: 5 (lower is better)
Translates to: GGGEEASQSRKSLDSVKGFSSSL*MSLLRV
Trigger: CACTCTCAACAAACTCATCAAAAGACTGGAGGAAAA...ACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR CAA 90 bp GTTCAGGAGAGCAAATATCACAGGCCCGGTGAGGTCTCAAGGTGGCTGCCAGCATTGAAGAAGATCTCCTaGAGGTTTCTCGTGTCCTCA +
Preference number: 5 (lower is better)
Translates to: VQESKYHRPGEVSRWLPALKKIS*RFLVSS
Trigger: TGAGGACACGAGAAACCTCAAGGAGATCTTCTTCAA...TGCTGGCAGCCACCTTGAGACCTCACCGGGCCTGTGATATTTGCTCTCCTGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
CDS-3UTR CAA 90 bp GATTGTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGAGTGTCCTGCCCTCCTaGCTCTCTCTACCCACCTCC +
Preference number: 5 (lower is better)
Translates to: DCSRTWWVLHTFFTGIVLSVLPS*LSLPTS
Trigger: GGAGGTGGGTAGAGAGAGCAAGGAGGGCAGGACACT...CAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACAATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS TCA 90 bp GTGGTAGCGTTTAAGACGATGCTGCTTGGAGGCCTGGAGAAGACATaGGGCAGGAATGGGGGACATGAGAAAGATAGCAAAGAGGAAGGA +
Preference number: 5 (lower is better)
Translates to: VVAFKTMLLGGLEKT*GRNGGHEKDSKEEG
Trigger: TCCTTCCTCTTTGCTATCTTTCTCATGTCCCCCATTCCTGCCTCATGTCTTCTCCAGGCCTCCAAGCAGCATCGTCTTAAACGCTACCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000549307.5
ENST00000553208.5
CDS CCA 90 bp ATTGGCTCATGTGCAGCTGGGCTCTCCTATTCATGCCCTGACAGCTaGGGCCTCTCTTGGTGCAAAGTCCTAAAGTGGTTTTCAGCATAT +
Preference number: 5 (lower is better)
Translates to: IGSCAAGLSYSCPDS*GLSWCKVLKWFSAY
Trigger: ATATGCTGAAAACCACTTTAGGACTTTGCACCAAGAGAGGCCCCAGCTGTCAGGGCATGAATAGGAGAGCCCAGCTGCACATGAGCCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549307.5
CDS CCA 90 bp CTCATCAGTCAGCCAACGTGCACCCTCTTCAGTCCCTTCAGCCCATaGGCGGACAATTTTGATCTCAATTTTCCCTGGAAAGGAGCAGTA +
Preference number: 5 (lower is better)
Translates to: LISQPTCTLFSPFSP*ADNFDLNFPWKGAV
Trigger: TACTGCTCCTTTCCAGGGAAAATTGAGATCAAAATTGTCCGCCCATGGGCTGAAGGGACTGAAGAGGGTGCACGTTGGCTGACTGATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546916.1
CDS-3UTR CAA 90 bp GATTGTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGAGGGATCCCAGGCCCTaGGTAAGCAGGTGTTTCCTC +
Preference number: 5 (lower is better)
Translates to: DCSRTWWVLHTFFTGIVLRDPRP*VSRCFL
Trigger: GAGGAAACACCTGCTTACCAAGGGCCTGGGATCCCT...CAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CAA 90 bp GATTGTGCTGGAGGTGATAGGCAGCATTCTACCATTTCCTCAGCAACAGAGGTGAGGGAGCATCTCTCATaGGGCTCAACAACTCAGGGA +
Preference number: 5 (lower is better)
Translates to: DCAGGDRQHSTISSATEVREHLS*GSTTQG
Trigger: TCCCTGAGTTGTTGAGCCCAATGAGAGATGCTCCCT...CACCTCTGTTGCTGAGGAAATGGTAGAATGCTGCCTATCACCTCCAGCACAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CAA 90 bp TCCTCAGCAACAGAGGTGAAGGCTCCTCAACTCAGAAGCACAAATTGTAGGGGAAGGGAGCATCTCTCATaGGGCTCAACAACTCAGGGA +
Preference number: 5 (lower is better)
Translates to: SSATEVKAPQLRSTNCRGREHLS*GSTTQG
Trigger: TCCCTGAGTTGTTGAGCCCAATGAGAGATGCTCCCT...TCCCCTACAATTTGTGCTTCTGAGTTGAGGAGCCTTCACCTCTGTTGCTGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CAA 90 bp GGTGATAGGCAGCATTCTACCATTTCCTCAGCAACAGAGGTGAAGGCTCCTCAAATGTCCACCAGTCCTTaGTCTTCAGCAAGCAGGGAG +
Preference number: 5 (lower is better)
Translates to: GDRQHSTISSATEVKAPQMSTSP*SSASRE
Trigger: CTCCCTGCTTGCTGAAGACAAAGGACTGGTGGACAT...TTGAGGAGCCTTCACCTCTGTTGCTGAGGAAATGGTAGAATGCTGCCTATCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CAA 90 bp TTTGTCTTCAGCAAGCAGGGAGCATCTCTCATTGGGCTCAACAACTCAGGGATCATGTCCACCAGTCCTTaGTCTTCAGCAAGCAGGGAG +
Preference number: 5 (lower is better)
Translates to: FVFSKQGASLIGLNNSGIMSTSP*SSASRE
Trigger: CTCCCTGCTTGCTGAAGACAAAGGACTGGTGGACAT...GATCCCTGAGTTGTTGAGCCCAATGAGAGATGCTCCCTGCTTGCTGAAGACAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000550848.5
ENST00000551285.5
CDS-3UTR CAA 90 bp TCCCAAGGCAATTCAATAGAAGAGGGTAAAACGACTCCAAACATCACTAAGGGCGGTGCCACCCCAGACTaGGTCTCACTCCACACTTGG +
Preference number: 5 (lower is better)
Translates to: SQGNSIEEGKTTPNITKGGATPD*VSLHTW
Trigger: CCAAGTGTGGAGTGAGACCAAGTCTGGGGTGGCACC...GCCCTTAGTGATGTTTGGAGTCGTTTTACCCTCTTCTATTGAATTGCCTTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
ENST00000551035.5
CDS-3UTR CAA 90 bp ACAGAGGTGAAGGCTCCTCAACTCAGAAGCACAAATTGTAGGGGACAGGGTGGGTTGGCTTCCCCTTTTTaGTTCCACCTTTCAGCTCCT +
Preference number: 5 (lower is better)
Translates to: TEVKAPQLRSTNCRGQGGLASPF*FHLSAP
Trigger: AGGAGCTGAAAGGTGGAACAAAAAAGGGGAAGCCAA...CCCACCCTGTCCCCTACAATTTGTGCTTCTGAGTTGAGGAGCCTTCACCTCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CAA 90 bp TCCTCAGCAACAGAGGTGAAGGCTCCTCAACTCAGAAGCACAAATTGTAGGGGAATCCACAGGCTGCTCTaGGCCTATATTTGGCTTCCC +
Preference number: 5 (lower is better)
Translates to: SSATEVKAPQLRSTNCRGIHRLL*AYIWLP
Trigger: GGGAAGCCAAATATAGGCCAAGAGCAGCCTGTGGAT...TCCCCTACAATTTGTGCTTCTGAGTTGAGGAGCCTTCACCTCTGTTGCTGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CAA 90 bp TCAATAGAAGAGGGTAAAACGACTCCAAACATCACTAAGGGCAGGTGGGGGCCTATCCACAGGCTGCTCTaGGCCTATATTTGGCTTCCC +
Preference number: 5 (lower is better)
Translates to: SIEEGKTTPNITKGRWGPIHRLL*AYIWLP
Trigger: GGGAAGCCAAATATAGGCCAAGAGCAGCCTGTGGAT...AGGCCCCCACCTGCCCTTAGTGATGTTTGGAGTCGTTTTACCCTCTTCTATTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
ENST00000551035.5
CDS-3UTR CAA 90 bp AGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCAAGTCTTTTGATGAGTTaGTTGAGAGTGGATGTGAGA +
Preference number: 5 (lower is better)
Translates to: RWGGGKPVQEESGFREGSSLLMS*LRVDVR
Trigger: TCTCACATCCACTCTCAACAAACTCATCAAAAGACT...TGACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR CAA 90 bp AGGTGGGGAGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTGAAGGGTCATTTTCCTCCAGTCTTTaGATGAGTTTGTTGAGAGTG +
Preference number: 5 (lower is better)
Translates to: RWGGGKPVQEESGFREGSFSSSL*MSLLRV
Trigger: CACTCTCAACAAACTCATCAAAAGACTGGAGGAAAA...TGACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCTCCCCACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS-3UTR CAA 90 bp AGGGTAAAACGACTCCAAACATCACTAAGGGCAGGTGGGGGCCTGCTTGCTCAGTTGAAGAAGATCTCCTaGAGGTTTCTCGTGTCCTCA +
Preference number: 5 (lower is better)
Translates to: RVKRLQTSLRAGGGLLAQLKKIS*RFLVSS
Trigger: TGAGGACACGAGAAACCTCAAGGAGATCTTCTTCAA...CTGAGCAAGCAGGCCCCCACCTGCCCTTAGTGATGTTTGGAGTCGTTTTACCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
ENST00000551035.5
CDS TCA 90 bp AGGTCCCCTAGATCCTGCCTCATTCAGTGGACTCCAGTTCTTGGATaGACTGCTAGTTTCCAAGCCCTCATTCTATCTAACCCAGTCCCT +
Preference number: 5 (lower is better)
Translates to: RSPRSCLIQWTPVLG*TASFQALILSNPVP
Trigger: AGGGACTGGGTTAGATAGAATGAGGGCTTGGAAACTAGCAGTTCATCCAAGAACTGGAGTCCACTGAATGAGGCAGGATCTAGGGGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549897.1
CDS GCA 90 bp GGAAGCAGGATCCCTTCCAGTTCCTTCTCAAATTCTCCCAGTAACTaGCGTTCATCCTCATCTTCATCCTCATCCTCATCCTCATCCTCC +
Preference number: 5 (lower is better)
Translates to: GSRIPSSSFSNSPSN*RSSSSSSSSSSSSS
Trigger: GGAGGATGAGGATGAGGATGAGGATGAAGATGAGGATGAACGGCAGTTACTGGGAGAATTTGAGAAGGAACTGGAAGGGATCCTGCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000549307.5
ENST00000550202.1
ENST00000551035.5
ENST00000552285.5
CDS-3UTR CAA 90 bp TCCTCAGCAACAGAGGTGAAGGCTCCTCAACTCAGAAGCACAAATTGTAGGGGATTAAGACGATGCTGCTaGGAGGCCTTGGCTGTTTCA +
Preference number: 5 (lower is better)
Translates to: SSATEVKAPQLRSTNCRGLRRCC*EALAVS
Trigger: TGAAACAGCCAAGGCCTCCAAGCAGCATCGTCTTAA...TCCCCTACAATTTGTGCTTCTGAGTTGAGGAGCCTTCACCTCTGTTGCTGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
CDS-3UTR CAA 90 bp TGTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGGAGATCCACAGGCTGCTCTaGGCCTATATTTGGCTTCCC +
Preference number: 5 (lower is better)
Translates to: CSRTWWVLHTFFTGIVLEIHRLL*AYIWLP
Trigger: GGGAAGCCAAATATAGGCCAAGAGCAGCCTGTGGAT...CTCCAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CAA 90 bp GTTCAGGAGAGCAAATATCACAGGCCCGGTGAGGTCTCAAGGTGGCTGCCAGCAAGTCTTTTGATGAGTTaGTTGAGAGTGGATGTGAGA +
Preference number: 5 (lower is better)
Translates to: VQESKYHRPGEVSRWLPASLLMS*LRVDVR
Trigger: TCTCACATCCACTCTCAACAAACTCATCAAAAGACT...TGCTGGCAGCCACCTTGAGACCTCACCGGGCCTGTGATATTTGCTCTCCTGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
CDS-3UTR CAA 90 bp GTTCAGGAGAGCAAATATCACAGGCCCGGTGAGGTCTCAAGGTGGCTGCCAGCATTTTCCTCCAGTCTTTaGATGAGTTTGTTGAGAGTG +
Preference number: 5 (lower is better)
Translates to: VQESKYHRPGEVSRWLPAFSSSL*MSLLRV
Trigger: CACTCTCAACAAACTCATCAAAAGACTGGAGGAAAA...TGCTGGCAGCCACCTTGAGACCTCACCGGGCCTGTGATATTTGCTCTCCTGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
CDS CCA 90 bp CTAGCTACTGATCATCCATTGTGTGCCAGGCAGAGTGCTAGGCACTaGGTGTACAGGAGCAAACCAGAAAACCAGCAGATATGCTCTAAA +
Preference number: 5 (lower is better)
Translates to: LATDHPLCARQSARH*VYRSKPENQQICSK
Trigger: TTTAGAGCATATCTGCTGGTTTTCTGGTTTGCTCCTGTACACCCAGTGCCTAGCACTCTGCCTGGCACACAATGGATGATCAGTAGCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549307.5
CDS-3UTR CAA 90 bp CTGAATCTTCCATGTGGTATTGCTGGATGTGGCGTCCATAACAGAATTCATATGAGGGATCCCAGGCCCTaGGTAAGCAGGTGTTTCCTC +
Preference number: 5 (lower is better)
Translates to: LNLPCGIAGCGVHNRIHMRDPRP*VSRCFL
Trigger: GAGGAAACACCTGCTTACCAAGGGCCTGGGATCCCT...CATATGAATTCTGTTATGGACGCCACATCCAGCAATACCACATGGAAGATTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000550848.5
ENST00000551285.5
ENST00000552423.1
CDS-3UTR CAA 90 bp GATTGTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGATGTCCACCAGTCCTTaGTCTTCAGCAAGCAGGGAG +
Preference number: 5 (lower is better)
Translates to: DCSRTWWVLHTFFTGIVLMSTSP*SSASRE
Trigger: CTCCCTGCTTGCTGAAGACAAAGGACTGGTGGACAT...CAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CAA 90 bp GCTTTGAGTCTACTGAGAAACAGCATGCAAGCAGGCCAGGAACACATTCCTCCAATCTTCCATGTGGTATaGCTGGATGTGGCGTCCATA +
Preference number: 5 (lower is better)
Translates to: ALSLLRNSMQAGQEHIPPIFHVV*LDVASI
Trigger: TATGGACGCCACATCCAGCAATACCACATGGAAGAT...TGGAGGAATGTGTTCCTGGCCTGCTTGCATGCTGTTTCTCAGTAGACTCAAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552787.5
CDS-3UTR CAA 90 bp TGTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGGAGTTAAGACGATGCTGCTaGGAGGCCTTGGCTGTTTCA +
Preference number: 5 (lower is better)
Translates to: CSRTWWVLHTFFTGIVLELRRCC*EALAVS
Trigger: TGAAACAGCCAAGGCCTCCAAGCAGCATCGTCTTAA...CTCCAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
CDS-3UTR CAA 90 bp TCAATAGAAGAGGGTAAAACGACTCCAAACATCACTAAGGGCAGGTGGGGGCCTTATCTCCATACTGCTTaGAGTCTACGGCTTGCCTCT +
Preference number: 5 (lower is better)
Translates to: SIEEGKTTPNITKGRWGPYLHTA*SLRLAS
Trigger: AGAGGCAAGCCGTAGACTCAAAGCAGTATGGAGATA...AGGCCCCCACCTGCCCTTAGTGATGTTTGGAGTCGTTTTACCCTCTTCTATTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257966.12
ENST00000551035.5
CDS-3UTR CAA 90 bp TCCTCAGCAACAGAGGTGAAGGCTCCTCAACTCAGAAGCACAAATTGTAGGGGATTGGCTTCCCCTTTTTaGTTCCACCTTTCAGCTCCT +
Preference number: 5 (lower is better)
Translates to: SSATEVKAPQLRSTNCRGLASPF*FHLSAP
Trigger: AGGAGCTGAAAGGTGGAACAAAAAAGGGGAAGCCAA...TCCCCTACAATTTGTGCTTCTGAGTTGAGGAGCCTTCACCTCTGTTGCTGAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CAA 90 bp TGTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGGAGCCCGGCACCAAGATATaGAAGAAGATCTCCTTGAGG +
Preference number: 5 (lower is better)
Translates to: CSRTWWVLHTFFTGIVLEPGTKI*KKISLR
Trigger: CCTCAAGGAGATCTTCTTCAATATCTTGGTGCCGGG...CTCCAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CAA 90 bp GGTGATAGGCAGCATTCTACCATTTCCTCAGCAACAGAGGTGAAGGCTCCTCAATATCTCCATACTGCTTaGAGTCGGCTTGCCTCTGAA +
Preference number: 5 (lower is better)
Translates to: GDRQHSTISSATEVKAPQYLHTA*SRLASE
Trigger: TTCAGAGGCAAGCCGACTCAAAGCAGTATGGAGATA...TTGAGGAGCCTTCACCTCTGTTGCTGAGGAAATGGTAGAATGCTGCCTATCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CAA 90 bp CTGATTGTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCCACCAGCCCCTCGATTaGTTTCAGCTGTGGGTTTTC +
Preference number: 5 (lower is better)
Translates to: LIVQEHGGCFTPFSLGLCHQPLD*FQLWVF
Trigger: GAAAACCCACAGCTGAAACAAATCGAGGGGCTGGTG...GCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACAATCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000315970.12
CDS-3UTR CAA 90 bp TCCCAAGGCAATTCAATAGAAGAGGGTAAAACGACTCCAAACATCACTAAGGGCATGTCCACCAGTCCTTaGTCTTCAGCAAGCAGGGAG +
Preference number: 5 (lower is better)
Translates to: SQGNSIEEGKTTPNITKGMSTSP*SSASRE
Trigger: CTCCCTGCTTGCTGAAGACAAAGGACTGGTGGACAT...GCCCTTAGTGATGTTTGGAGTCGTTTTACCCTCTTCTATTGAATTGCCTTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
ENST00000551035.5
CDS-3UTR CAA 90 bp CTGATTGTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTTAAGACGATGCTGCTaGGAGGCCTTGGCTGTTTCA +
Preference number: 5 (lower is better)
Translates to: LIVQEHGGCFTPFSLGLCLRRCC*EALAVS
Trigger: TGAAACAGCCAAGGCCTCCAAGCAGCATCGTCTTAA...GCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACAATCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
CDS-3UTR CAA 90 bp AGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGGAGGTGATATTGGCTTCCCCTTTTTaGTTCCACCTTTCAGCTCCT +
Preference number: 5 (lower is better)
Translates to: RTWWVLHTFFTGIVLEVILASPF*FHLSAP
Trigger: AGGAGCTGAAAGGTGGAACAAAAAAGGGGAAGCCAA...TATCACCTCCAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CAA 90 bp TCCCAAGGCAATTCAATAGAAGAGGGTAAAACGACTCCAAACATCACTAAGGGCATCCACAGGCTGCTCTaGGCCTATATTTGGCTTCCC +
Preference number: 5 (lower is better)
Translates to: SQGNSIEEGKTTPNITKGIHRLL*AYIWLP
Trigger: GGGAAGCCAAATATAGGCCAAGAGCAGCCTGTGGAT...GCCCTTAGTGATGTTTGGAGTCGTTTTACCCTCTTCTATTGAATTGCCTTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
ENST00000551035.5
CDS-3UTR CAA 90 bp ACAGAGGTGAAGGCTCCTCAACTCAGAAGCACAAATTGTAGGGGACAGGGTGGGTTTTCCTCCAGTCTTTaGATGAGTTTGTTGAGAGTG +
Preference number: 5 (lower is better)
Translates to: TEVKAPQLRSTNCRGQGGFSSSL*MSLLRV
Trigger: CACTCTCAACAAACTCATCAAAAGACTGGAGGAAAA...CCCACCCTGTCCCCTACAATTTGTGCTTCTGAGTTGAGGAGCCTTCACCTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CAA 90 bp GGTGATAGGCAGCATTCTACCATTTCCTCAGCAACAGAGGTGAAGGCTCCTCAATTGAAGAAGATCTCCTaGAGGTTTCTCGTGTCCTCA +
Preference number: 5 (lower is better)
Translates to: GDRQHSTISSATEVKAPQLKKIS*RFLVSS
Trigger: TGAGGACACGAGAAACCTCAAGGAGATCTTCTTCAA...TTGAGGAGCCTTCACCTCTGTTGCTGAGGAAATGGTAGAATGCTGCCTATCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CAA 90 bp GATTGTGCTGGAGGTGATAGGCAGCATTCTACCATTTCCTCAGCAACAGAGGTGTTGAAGAAGATCTCCTaGAGGTTTCTCGTGTCCTCA +
Preference number: 5 (lower is better)
Translates to: DCAGGDRQHSTISSATEVLKKIS*RFLVSS
Trigger: TGAGGACACGAGAAACCTCAAGGAGATCTTCTTCAA...CACCTCTGTTGCTGAGGAAATGGTAGAATGCTGCCTATCACCTCCAGCACAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CAA 90 bp GATTGTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGCCCGGCACCAAGATATaGAAGAAGATCTCCTTGAGG +
Preference number: 5 (lower is better)
Translates to: DCSRTWWVLHTFFTGIVLPGTKI*KKISLR
Trigger: CCTCAAGGAGATCTTCTTCAATATCTTGGTGCCGGG...CAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CAA 90 bp TACCATTTCCTCAGCAACAGAGGTGAAGGCTCCTCAACTCAGAAGCACAAATTGCCCGGCACCAAGATATaGAAGAAGATCTCCTTGAGG +
Preference number: 5 (lower is better)
Translates to: YHFLSNRGEGSSTQKHKLPGTKI*KKISLR
Trigger: CCTCAAGGAGATCTTCTTCAATATCTTGGTGCCGGG...CAATTTGTGCTTCTGAGTTGAGGAGCCTTCACCTCTGTTGCTGAGGAAATGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CAA 90 bp GATGTGGCGTCCATAACAGAATTCATATGTCCACCAGTCCTTTGTACACTCAATAGGGAGCATCTCTCATaGGGCTCAACAACTCAGGGA +
Preference number: 5 (lower is better)
Translates to: DVASITEFICPPVLCTLNREHLS*GSTTQG
Trigger: TCCCTGAGTTGTTGAGCCCAATGAGAGATGCTCCCT...ATTGAGTGTACAAAGGACTGGTGGACATATGAATTCTGTTATGGACGCCACATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552423.1
CDS-3UTR CAA 90 bp GATTGTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGATCTTCCATGTGGTATaGCTGGATGTGGCGTCCATA +
Preference number: 5 (lower is better)
Translates to: DCSRTWWVLHTFFTGIVLIFHVV*LDVASI
Trigger: TATGGACGCCACATCCAGCAATACCACATGGAAGAT...CAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CAA 90 bp CTGATTGTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCATCTTCCATGTGGTATaGCTGGATGTGGCGTCCATA +
Preference number: 5 (lower is better)
Translates to: LIVQEHGGCFTPFSLGLCIFHVV*LDVASI
Trigger: TATGGACGCCACATCCAGCAATACCACATGGAAGAT...GCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACAATCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CAA 90 bp TCCCAAGGCAATTCAATAGAAGAGGGTAAAACGACTCCAAACATCACTAAGGGCCCCGGCACCAAGATATaGAAGAAGATCTCCTTGAGG +
Preference number: 5 (lower is better)
Translates to: SQGNSIEEGKTTPNITKGPGTKI*KKISLR
Trigger: CCTCAAGGAGATCTTCTTCAATATCTTGGTGCCGGG...GCCCTTAGTGATGTTTGGAGTCGTTTTACCCTCTTCTATTGAATTGCCTTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
ENST00000551035.5
CDS-3UTR CAA 90 bp TGTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGGAGGGGTCAAGTGTAGTGTaGGTCTCAGAAGTCAAATTC +
Preference number: 5 (lower is better)
Translates to: CSRTWWVLHTFFTGIVLEGSSVV*VSEVKF
Trigger: GAATTTGACTTCTGAGACCAACACTACACTTGACCC...CTCCAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CAA 90 bp AGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGGAGGTGATAGGGTCAAGTGTAGTGTaGGTCTCAGAAGTCAAATTC +
Preference number: 5 (lower is better)
Translates to: RTWWVLHTFFTGIVLEVIGSSVV*VSEVKF
Trigger: GAATTTGACTTCTGAGACCAACACTACACTTGACCC...TATCACCTCCAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CAA 90 bp GATTGTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGTATCTCCATACTGCTTaGAGTCGGCTTGCCTCTGAA +
Preference number: 5 (lower is better)
Translates to: DCSRTWWVLHTFFTGIVLYLHTA*SRLASE
Trigger: TTCAGAGGCAAGCCGACTCAAAGCAGTATGGAGATA...CAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CAA 90 bp TCCCAAGGCAATTCAATAGAAGAGGGTAAAACGACTCCAAACATCACTAAGGGCTCGTCACAGAGGAACTaGGCTGTTTCATCATCCCAG +
Preference number: 5 (lower is better)
Translates to: SQGNSIEEGKTTPNITKGSSQRN*AVSSSQ
Trigger: CTGGGATGATGAAACAGCCAAGTTCCTCTGTGACGA...GCCCTTAGTGATGTTTGGAGTCGTTTTACCCTCTTCTATTGAATTGCCTTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551035.5
CDS GCA 90 bp TCTATCCTAACCTGCTCCTACGTTCAGCAAAGTGTCATCAGTGGTTaGAGGATTCTTTGCTTCTTTCCTGTCCGTGTAATCTGTCTACTC +
Preference number: 5 (lower is better)
Translates to: SILTCSYVQQSVISG*RILCFFPVRVICLL
Trigger: GAGTAGACAGATTACACGGACAGGAAAGAAGCAAAGAATCCTGCAACCACTGATGACACTTTGCTGAACGTAGGAGCAGGTTAGGATAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549897.1
CDS CCA 90 bp TCCAGACTTTCAGTAAGGAGGGAGGGCTGCTTTCCTTCTGTGACTTaGAGAGATATCTCTAAAGTCTGTTTTCCACTTGTGGTCTTTCCA +
Preference number: 5 (lower is better)
Translates to: SRLSVRREGCFPSVT*RDISKVCFPLVVFP
Trigger: TGGAAAGACCACAAGTGGAAAACAGACTTTAGAGATATCTCTCCAAGTCACAGAAGGAAAGCAGCCCTCCCTCCTTACTGAAAGTCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549307.5
ENST00000552423.1
CDS-3UTR CAA 90 bp TCCTCAGCAACAGAGGTGAAGGCTCCTCAACTCAGAAGCACAAATTGTAGGGGAAGTCTTTTGATGAGTTaGTTGAGAGTGGATGTGAGA +
Preference number: 5 (lower is better)
Translates to: SSATEVKAPQLRSTNCRGSLLMS*LRVDVR
Trigger: TCTCACATCCACTCTCAACAAACTCATCAAAAGACT...TCCCCTACAATTTGTGCTTCTGAGTTGAGGAGCCTTCACCTCTGTTGCTGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CAA 90 bp GATTGTGCTGGAGGTGATAGGCAGCATTCTACCATTTCCTCAGCAACAGAGGTGTTTTCCTCCAGTCTTTaGATGAGTTTGTTGAGAGTG +
Preference number: 5 (lower is better)
Translates to: DCAGGDRQHSTISSATEVFSSSL*MSLLRV
Trigger: CACTCTCAACAAACTCATCAAAAGACTGGAGGAAAA...CACCTCTGTTGCTGAGGAAATGGTAGAATGCTGCCTATCACCTCCAGCACAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CAA 90 bp CTGATTGTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCGGGTCAAGTGTAGTGTaGGTCTCAGAAGTCAAATTC +
Preference number: 5 (lower is better)
Translates to: LIVQEHGGCFTPFSLGLCGSSVV*VSEVKF
Trigger: GAATTTGACTTCTGAGACCAACACTACACTTGACCC...GCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACAATCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CAA 90 bp TCCCAAGGCAATTCAATAGAAGAGGGTAAAACGACTCCAAACATCACTAAGGGCTATCTCCATACTGCTTaGAGTCGGCTTGCCTCTGAA +
Preference number: 5 (lower is better)
Translates to: SQGNSIEEGKTTPNITKGYLHTA*SRLASE
Trigger: TTCAGAGGCAAGCCGACTCAAAGCAGTATGGAGATA...GCCCTTAGTGATGTTTGGAGTCGTTTTACCCTCTTCTATTGAATTGCCTTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS TCA 90 bp TTTCTAAAGCCAAAATCAGGCCACCTGCACCAACAAAGTTCTGTTTaGAGAAGCAGGTTGGAAAAGTGTGGTCTCCTCCTCCATATGTTG +
Preference number: 5 (lower is better)
Translates to: FLKPKSGHLHQQSSV*RSRLEKCGLLLHML
Trigger: CAACATATGGAGGAGGAGACCACACTTTTCCAACCTGCTTCTTCAAACAGAACTTTGTTGGTGCAGGTGGCCTGATTTTGGCTTTAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549307.5
CDS GCA 90 bp CACTTCCACTCTCAATTCTCCAGACTTTCAGTAAGGAGGGAGGGCTaGTTTCCTTCTGTGACTTGGAGAGATATCTCTAAAGTCTGTTTT +
Preference number: 5 (lower is better)
Translates to: HFHSQFSRLSVRREG*FPSVTWRDISKVCF
Trigger: AAAACAGACTTTAGAGATATCTCTCCAAGTCACAGAAGGAAAGCAGCCCTCCCTCCTTACTGAAAGTCTGGAGAATTGAGAGTGGAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549307.5
ENST00000552423.1
CDS-3UTR CAA 90 bp TCTCTGAATCTTCCATGTGGTATTGCTGGATGTGGCGTCCATAACAGAATTCATATCTTCCATGTGGTATaGCTGGATGTGGCGTCCATA +
Preference number: 5 (lower is better)
Translates to: SLNLPCGIAGCGVHNRIHIFHVV*LDVASI
Trigger: TATGGACGCCACATCCAGCAATACCACATGGAAGAT...ATGAATTCTGTTATGGACGCCACATCCAGCAATACCACATGGAAGATTCAGAGA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000550848.5
ENST00000551285.5
ENST00000552423.1
CDS-3UTR CAA 90 bp AGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGGAGGTGATAAGTCTTTTGATGAGTTaGTTGAGAGTGGATGTGAGA +
Preference number: 5 (lower is better)
Translates to: RTWWVLHTFFTGIVLEVISLLMS*LRVDVR
Trigger: TCTCACATCCACTCTCAACAAACTCATCAAAAGACT...TATCACCTCCAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CAA 90 bp TGTTCAAGAACATGGTGGGTGCTTCACACCTTTTTCACTGGGATTGTGCTGGAGTTTTCCTCCAGTCTTTaGATGAGTTTGTTGAGAGTG +
Preference number: 5 (lower is better)
Translates to: CSRTWWVLHTFFTGIVLEFSSSL*MSLLRV
Trigger: CACTCTCAACAAACTCATCAAAAGACTGGAGGAAAA...CTCCAGCACAATCCCAGTGAAAAAGGTGTGAAGCACCCACCATGTTCTTGAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000435406.6
CDS-3UTR CAA 90 bp GGATGTGGCGTCCATAACAGAATTCATATGTCCACCAGTCCTTTGTACACTCAAAAGTCTGTTTTCCACTaGTGGTCTTTCCATTCCTCC +
Preference number: 5 (lower is better)
Translates to: GCGVHNRIHMSTSPLYTQKSVFH*WSFHSS
Trigger: GGAGGAATGGAAAGACCACAAGTGGAAAACAGACTT...TTGAGTGTACAAAGGACTGGTGGACATATGAATTCTGTTATGGACGCCACATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552423.1
CDS CCA 90 bp CCTGCACCAACAAAGTTCTGTTTGAAGAAGCAGGTTGGAAAAGTGTaGTCTCCTCCTCCATATGTTGGGACTTTAAAGACATTTCAATGT +
Preference number: 5 (lower is better)
Translates to: PAPTKFCLKKQVGKV*SPPPYVGTLKTFQC
Trigger: ACATTGAAATGTCTTTAAAGTCCCAACATATGGAGGAGGAGACCACACTTTTCCAACCTGCTTCTTCAAACAGAACTTTGTTGGTGCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549307.5
CDS CCA 90 bp TTTGAAGAAGCAGGTTGGAAAAGTGTGGTCTCCTCCTCCATATGTTaGGACTTTAAAGACATTTCAATGTTTATAGAGAGAGTGGGAATG +
Preference number: 5 (lower is better)
Translates to: FEEAGWKSVVSSSIC*DFKDISMFIERVGM
Trigger: CATTCCCACTCTCTCTATAAACATTGAAATGTCTTTAAAGTCCCAACATATGGAGGAGGAGACCACACTTTTCCAACCTGCTTCTTCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549307.5
CDS GCA 72 bp GCCCCACTGGTCCCAGCCCCTCCACTTCCGGCAGCTTaGCCTTCCGACAGCACTGGGTCCAGCCGCCCTCCA +
Preference number: 6 (lower is better)
Translates to: APLVPAPPLPAA*PSDSTGSSRPP
Trigger: TGGAGGGCGGCTGGACCCAGTGCTGTCGGAAGGGCAAGCTGCCGGAAGTGGAGGGGCTGGGACCAGTGGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546916.1
CDS CAA 72 bp TGCCCCACTGGTCCCAGCCCCTCCACTTCCGGCAGCTaGCCCTTCCGACAGCACTGGGTCCAGCCGCCCTCC +
Preference number: 6 (lower is better)
Translates to: CPTGPSPSTSGS*PFRQHWVQPPS
Trigger: GGAGGGCGGCTGGACCCAGTGCTGTCGGAAGGGCAAGCTGCCGGAAGTGGAGGGGCTGGGACCAGTGGGGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546916.1
CDS GCA 72 bp CCGAGACGGAGCTTGGTGACCCGGACCCGGACTCTGTaGTCAGGATCCTCCTCTGTAGGTTGGGGTGATGGG +
Preference number: 6 (lower is better)
Translates to: PRRSLVTRTRTL*SGSSSVGWGDG
Trigger: CCCATCACCCCAACCTACAGAGGAGGATCCTGAGCACAGAGTCCGGGTCCGGGTCACCAAGCTCCGTCTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315970.12
ENST00000389146.10
CDS TCA 72 bp GCCAGCCTTCACCTCCGAACGGAGCCGGTCTCGGTCTaGCGGAAGCAGGATCCCTTCCATGTGGTATTGCTG +
Preference number: 6 (lower is better)
Translates to: ASLHLRTEPVSV*RKQDPFHVVLL
Trigger: CAGCAATACCACATGGAAGGGATCCTGCTTCCGTCAGACCGAGACCGGCTCCGTTCGGAGGTGAAGGCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547079.5
CDS CAA 90 bp CACTCAGCTCCTCCAGGTTCAGGCTCCCGACACCGCCGGTCAGACTaGCGGGTAACAGGAGTCCCAGAAGCAGCAGTCCTAACAAACTGG +
Preference number: 6 (lower is better)
Translates to: HSAPPGSGSRHRRSD*RVTGVPEAAVLTNW
Trigger: CCAGTTTGTTAGGACTGCTGCTTCTGGGACTCCTGTTACCCGCAAGTCTGACCGGCGGTGTCGGGAGCCTGAACCTGGAGGAGCTGAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000547079.5
ENST00000549897.1
ENST00000550372.5
ENST00000550793.1
ENST00000550848.5
ENST00000551035.5
ENST00000551285.5
ENST00000552285.5
ENST00000552423.1
ENST00000552787.5
ENST00000553208.5
CDS TCA 72 bp GCCAGCCTTCACCTCCGAACGGAGCCGGTCTCGGTCTaGCGGAAGCAGGATCCCTTCCAGTTCCTTCTCAAA +
Preference number: 6 (lower is better)
Translates to: ASLHLRTEPVSV*RKQDPFQFLLK
Trigger: TTTGAGAAGGAACTGGAAGGGATCCTGCTTCCGTCAGACCGAGACCGGCTCCGTTCGGAGGTGAAGGCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000413095.6
ENST00000435406.6
ENST00000549307.5
ENST00000550202.1
ENST00000551035.5
ENST00000552285.5
CDS TCA 72 bp GGGTTTTCCCGTTTCATCTCGAGGACAGTCAGATCCTaGTTAGGGCCTCCGAGACGGAGCTTGGTGACCCGG +
Preference number: 6 (lower is better)
Translates to: GFSRFISRTVRS*LGPPRRSLVTR
Trigger: CCGGGTCACCAAGCTCCGTCTCGGAGGCCCTAATCAGGATCTGACTGTCCTCGAGATGAAACGGGAAAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315970.12
ENST00000389146.10
ENST00000549307.5
CDS TCA 72 bp CCAGGCAGCGGCCTCAACACGCCCATCGGCGCCACATaGTTTTATTGGCTGTACGTTCTATCCCTCCCACGT +
Preference number: 6 (lower is better)
Translates to: PGSGLNTPIGAT*FYWLYVLSLPR
Trigger: ACGTGGGAGGGATAGAACGTACAGCCAATAAAATCATGTGGCGCCGATGGGCGTGTTGAGGCCGCTGCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549897.1
ENST00000552285.5
CDS GCA 72 bp CTTGAGGTTTCTCGTGTCCTCATCAGTCAGCCAACGTaGACCCTCTTCAGTCCCTTCAGCCCATGGGCGGAC +
Preference number: 6 (lower is better)
Translates to: LEVSRVLISQPT*TLFSPFSPWAD
Trigger: GTCCGCCCATGGGCTGAAGGGACTGAAGAGGGTGCACGTTGGCTGACTGATGAGGACACGAGAAACCTCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000546916.1
ENST00000549307.5
ENST00000551035.5
ENST00000552285.5
CDS TCA 72 bp AGTGGATGTGAGAGCCAGCATTGCCCGATCCCGCTCTaGCTCCTTCTTCAGCCCATCTGGGTCCAGCTCTTT +
Preference number: 6 (lower is better)
Translates to: SGCESQHCPIPL*LLLQPIWVQLF
Trigger: AAAGAGCTGGACCCAGATGGGCTGAAGAAGGAGTCAGAGCGGGATCGGGCAATGCTGGCTCTCACATCCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000549307.5
ENST00000550202.1
ENST00000551035.5
ENST00000552285.5
CDS GCA 72 bp CTCGTCCACGCGATCGATGTAGTCCCCAGAGATACCTaGACCCTCGTCACAGAGGAACTGCCAGGACAGAAA +
Preference number: 6 (lower is better)
Translates to: LVHAIDVVPRDT*TLVTEELPGQK
Trigger: TTTCTGTCCTGGCAGTTCCTCTGTGACGAGGGTGCAGGTATCTCTGGGGACTACATCGATCGCGTGGACGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550438.5
CDS GCA 72 bp CAGCGTTTCCGCCGCCATCTTTCGTTCCCCTTCTTATaGAGAGAATCTGTTTCCGCCCTAAGCCAGGCAGCG +
Preference number: 6 (lower is better)
Translates to: QRFRRHLSFPFL*RESVSALSQAA
Trigger: CGCTGCCTGGCTTAGGGCGGAAACAGATTCTCTGCATAAGAAGGGGAACGAAAGATGGCGGCGGAAACGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549897.1
ENST00000552285.5
CDS CCA 72 bp TTGCTCTCCAGCTCTTTCTGCCGCTGGCGTTCCTTCTaGGCCTCTTCAGCTCCCGGCACCAAGATATTGAAG +
Preference number: 6 (lower is better)
Translates to: LLSSSFCRWRSF*ASSAPGTKILK
Trigger: CTTCAATATCTTGGTGCCGGGAGCTGAAGAGGCCCAGAAGGAACGCCAGCGGCAGAAAGAGCTGGAGAGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000546916.1
ENST00000549307.5
ENST00000551035.5
ENST00000552285.5
CDS CAA 90 bp TGGACCCATTGCCATAGGTCTTCAGCAAGCAGGGAGCATCTCTCATaGGGCTCAACAACTCAGGGATCCCAGGCCCTTGGTAAGCAGGTG +
Preference number: 6 (lower is better)
Translates to: WTHCHRSSASREHLS*GSTTQGSQALGKQV
Trigger: CACCTGCTTACCAAGGGCCTGGGATCCCTGAGTTGTTGAGCCCAATGAGAGATGCTCCCTGCTTGCTGAAGACCTATGGCAATGGGTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550372.5
CDS TCA 72 bp CTCTTTCTCTGTCTCCGAACGGAGCCGGTCTCGGTCTaGCGGAAGCAGGATCCCTTCCAGTTCCTTCTCAAA +
Preference number: 6 (lower is better)
Translates to: LFLCLRTEPVSV*RKQDPFQFLLK
Trigger: TTTGAGAAGGAACTGGAAGGGATCCTGCTTCCGTCAGACCGAGACCGGCTCCGTTCGGAGACAGAGAAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389142.9
ENST00000389146.10
ENST00000439210.6
CDS GCA 72 bp CTCGTCCACGCGATCGATGTAGTCCCCAGAGATACCTaGACCCTCGTCACAGAGGAACTTGGCTGTTTCATC +
Preference number: 6 (lower is better)
Translates to: LVHAIDVVPRDT*TLVTEELGCFI
Trigger: GATGAAACAGCCAAGTTCCTCTGTGACGAGGGTGCAGGTATCTCTGGGGACTACATCGATCGCGTGGACGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551035.5
CDS CCA 72 bp GCCATAGGTCTTCAGCAAGCAGGGAGCATCTCTCATTaGGCTCAACAACTCAGGGATCCCAGGCCCTTGGTA +
Preference number: 6 (lower is better)
Translates to: AIGLQQAGSISH*AQQLRDPRPLV
Trigger: TACCAAGGGCCTGGGATCCCTGAGTTGTTGAGCCCAATGAGAGATGCTCCCTGCTTGCTGAAGACCTATGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550372.5
CDS CAA 72 bp TGCCATAGGTCTTCAGCAAGCAGGGAGCATCTCTCATaGGGCTCAACAACTCAGGGATCCCAGGCCCTTGGT +
Preference number: 6 (lower is better)
Translates to: CHRSSASREHLS*GSTTQGSQALG
Trigger: ACCAAGGGCCTGGGATCCCTGAGTTGTTGAGCCCAATGAGAGATGCTCCCTGCTTGCTGAAGACCTATGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550372.5
CDS CAA 90 bp CTCTCAGCCGGTGGCCAGAACCCTTTCTTCCTGAATCCCACACTCTaGCCACCTTGGCTGTTTCATCATCCCAGTCGAAGGCTGATTGGT +
Preference number: 6 (lower is better)
Translates to: LSAGGQNPFFLNPTL*PPWLFHHPSRRLIG
Trigger: ACCAATCAGCCTTCGACTGGGATGATGAAACAGCCAAGGTGGCAAGAGTGTGGGATTCAGGAAGAAAGGGTTCTGGCCACCGGCTGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549307.5
ENST00000553208.5
CDS CAA 90 bp GCCAGGCAGCGGCCTCAACACGCCCATCGGCGCCACATGATTTTATaGGCTGTACGTTCTATCCCTCCCACGTACCCTATTCCTATTTGT +
Preference number: 6 (lower is better)
Translates to: ARQRPQHAHRRHMIL*AVRSIPPTYPIPIC
Trigger: ACAAATAGGAATAGGGTACGTGGGAGGGATAGAACGTACAGCCAATAAAATCATGTGGCGCCGATGGGCGTGTTGAGGCCGCTGCCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549897.1
ENST00000552285.5
CDS TCA 72 bp CACGTTGTTCTGAAAATCATTGGGAGCACCAGAAGCTaGATCTGCTGCCTCAGGGCTTGGGTCCTGCTCCTC +
Preference number: 6 (lower is better)
Translates to: HVVLKIIGSTRS*ICCLRAWVLLL
Trigger: GAGGAGCAGGACCCAAGCCCTGAGGCAGCAGATTCAGCTTCTGGTGCTCCCAATGATTTTCAGAACAACGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000435406.6
ENST00000439210.6
ENST00000549307.5
ENST00000550202.1
ENST00000550438.5
ENST00000550699.5
ENST00000551035.5
ENST00000552285.5
CDS GCA 72 bp CTCGTCCACGCGATCGATGTAGTCCCCAGAGATACCTaGACCCTCGTCACAGAGGAATTCACCTTTGATCTC +
Preference number: 6 (lower is better)
Translates to: LVHAIDVVPRDT*TLVTEEFTFDL
Trigger: GAGATCAAAGGTGAATTCCTCTGTGACGAGGGTGCAGGTATCTCTGGGGACTACATCGATCGCGTGGACGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435406.6
CDS CCA 72 bp GCATCTTCCAGAAATCTGAGTCCTTACTGTCATCCTTaGTCGGGCTCGCACCTGCCATCTTTTGGGGTGCCA +
Preference number: 6 (lower is better)
Translates to: ASSRNLSPYCHP*SGSHLPSFGVP
Trigger: TGGCACCCCAAAAGATGGCAGGTGCGAGCCCGACCAAGGATGACAGTAAGGACTCAGATTTCTGGAAGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000435406.6
ENST00000439210.6
ENST00000549307.5
ENST00000550438.5
ENST00000550699.5
ENST00000551035.5
ENST00000552285.5
CDS CCA 72 bp CAGCCAACGTGCACCCTCTTCAGTCCCTTCAGCCCATaGGCGGACAATTTTGATCTCAATTTTCCCTGCAGC +
Preference number: 6 (lower is better)
Translates to: QPTCTLFSPFSP*ADNFDLNFPCS
Trigger: GCTGCAGGGAAAATTGAGATCAAAATTGTCCGCCCATGGGCTGAAGGGACTGAAGAGGGTGCACGTTGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315970.12
ENST00000389146.10
ENST00000549307.5
CDS CCA 72 bp TGTGCAGCTGGGCTCTCCTATTCATGCCCTGACAGCTaGGGCCTCTCTTGGTGCAAAGTCCTAAAGTGGTTT +
Preference number: 6 (lower is better)
Translates to: CAAGLSYSCPDS*GLSWCKVLKWF
Trigger: AAACCACTTTAGGACTTTGCACCAAGAGAGGCCCCAGCTGTCAGGGCATGAATAGGAGAGCCCAGCTGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549307.5
CDS CAA 72 bp AGCATCTTCCAGAAATCTGAGTCCTTACTGTCATCCTaGGTCGGGCTCGCACCTGCCATCTTTTGGGGTGCC +
Preference number: 6 (lower is better)
Translates to: SIFQKSESLLSS*VGLAPAIFWGA
Trigger: GGCACCCCAAAAGATGGCAGGTGCGAGCCCGACCAAGGATGACAGTAAGGACTCAGATTTCTGGAAGATGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000435406.6
ENST00000439210.6
ENST00000549307.5
ENST00000550438.5
ENST00000550699.5
ENST00000551035.5
ENST00000552285.5
CDS CAA 72 bp CGGCCTCAACACGCCCATCGGCGCCACATGATTTTATaGGCTGTACGTTCTATCCCTCCCACGTACCCTATT +
Preference number: 6 (lower is better)
Translates to: RPQHAHRRHMIL*AVRSIPPTYPI
Trigger: AATAGGGTACGTGGGAGGGATAGAACGTACAGCCAATAAAATCATGTGGCGCCGATGGGCGTGTTGAGGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549897.1
ENST00000552285.5
CDS CAA 90 bp ACCAAGCCCCAAGAAACAGATCAGCTAATCTTGACCCTCCCCTTCTaGTCAGGGCTCTCAGCCGGTGGCCAGAACCCTTTCTTCCTGAAT +
Preference number: 6 (lower is better)
Translates to: TKPQETDQLILTLPF*SGLSAGGQNPFFLN
Trigger: ATTCAGGAAGAAAGGGTTCTGGCCACCGGCTGAGAGCCCTGACAAGAAGGGGAGGGTCAAGATTAGCTGATCTGTTTCTTGGGGCTTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549307.5
ENST00000553208.5
CDS CCA 72 bp CAGCCAACGTGCACCCTCTTCAGTCCCTTCAGCCCATaGGCGGACAATTTTGATCTCAATTTTCCCTGTAGG +
Preference number: 6 (lower is better)
Translates to: QPTCTLFSPFSP*ADNFDLNFPCR
Trigger: CCTACAGGGAAAATTGAGATCAAAATTGTCCGCCCATGGGCTGAAGGGACTGAAGAGGGTGCACGTTGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257966.12
ENST00000389142.9
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000551035.5
ENST00000552285.5
CDS CCA 72 bp CAGCTCCTTCACCAGCCCCTCGATTTGTTTCAGCTGTaGGTTTTCCCGTTTCATCTCGAGGACAGTCAGATC +
Preference number: 6 (lower is better)
Translates to: QLLHQPLDLFQL*VFPFHLEDSQI
Trigger: GATCTGACTGTCCTCGAGATGAAACGGGAAAACCCACAGCTGAAACAAATCGAGGGGCTGGTGAAGGAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315970.12
ENST00000389146.10
ENST00000549307.5
CDS CCA 72 bp GCATCTTCCAGAAATCTGAGTCCTTACTGTCATCCTTaGTCGGGCTCGCACCTAGGGTACAGAGAACAGGGA +
Preference number: 6 (lower is better)
Translates to: ASSRNLSPYCHP*SGSHLGYREQG
Trigger: TCCCTGTTCTCTGTACCCTAGGTGCGAGCCCGACCAAGGATGACAGTAAGGACTCAGATTTCTGGAAGATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550202.1
CDS CAA 72 bp AGCATCTTCCAGAAATCTGAGTCCTTACTGTCATCCTaGGTCGGGCTCGCACCTAGGGTACAGAGAACAGGG +
Preference number: 6 (lower is better)
Translates to: SIFQKSESLLSS*VGLAPRVQRTG
Trigger: CCCTGTTCTCTGTACCCTAGGTGCGAGCCCGACCAAGGATGACAGTAAGGACTCAGATTTCTGGAAGATGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550202.1
CDS TCA 72 bp GGAGGCCTTGGCTGTTTCATCATCCCAGTCGAAGGCTaGTTGGTAGTAGCCGAGATAGAGGACTTCACCTTT +
Preference number: 6 (lower is better)
Translates to: GGLGCFIIPVEG*LVVAEIEDFTF
Trigger: AAAGGTGAAGTCCTCTATCTCGGCTACTACCAATCAGCCTTCGACTGGGATGATGAAACAGCCAAGGCCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000439210.6
ENST00000552285.5
CDS TCA 72 bp AGGAGGCAAGCCAGTCCAGGAAGAGTCTGGATTCCGTaGAGGGTCAAGTGTAGTGTTGGTCTCAGAAGTCAA +
Preference number: 6 (lower is better)
Translates to: RRQASPGRVWIP*RVKCSVGLRSQ
Trigger: TTGACTTCTGAGACCAACACTACACTTGACCCTTCACGGAATCCAGACTCTTCCTGGACTGGCTTGCCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000546916.1
ENST00000549307.5
ENST00000551035.5
ENST00000552285.5
CDS CCA 72 bp CAGCCAACGTGCACCCTCTTCAGTCCCTTCAGCCCATaGGCGGACAATTTTGATCTCAATTTTCCCTGGAAA +
Preference number: 6 (lower is better)
Translates to: QPTCTLFSPFSP*ADNFDLNFPWK
Trigger: TTTCCAGGGAAAATTGAGATCAAAATTGTCCGCCCATGGGCTGAAGGGACTGAAGAGGGTGCACGTTGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546916.1
CDS CAA 90 bp TTCACCAGCTCTGGACTCTGTTTTTCCTCCAGTCTTTTGATGAGTTaGTTGAGAGTGGATGTGAGAGCCAGCATTGCCCGATCCCGCTCT +
Preference number: 6 (lower is better)
Translates to: FTSSGLCFSSSLLMS*LRVDVRASIARSRS
Trigger: AGAGCGGGATCGGGCAATGCTGGCTCTCACATCCACTCTCAACAAACTCATCAAAAGACTGGAGGAAAAACAGAGTCCAGAGCTGGTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000549307.5
ENST00000550202.1
ENST00000551035.5
ENST00000552285.5
CDS TCA 72 bp CCTCTTCAGTCCCTTCAGCCCATGGGCGGACAATTTTaGTCTCAATTTTCCCTGGAAAGGAGCAGTATGCAG +
Preference number: 6 (lower is better)
Translates to: PLQSLQPMGGQF*SQFSLERSSMQ
Trigger: CTGCATACTGCTCCTTTCCAGGGAAAATTGAGATCAAAATTGTCCGCCCATGGGCTGAAGGGACTGAAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546916.1
CDS CAA 90 bp ACTACAGGTCCCCTAGATCCTGCCTCATTCAGTGGACTCCAGTTCTaGGATGAACTGCTAGTTTCCAAGCCCTCATTCTATCTAACCCAG +
Preference number: 6 (lower is better)
Translates to: TTGPLDPASFSGLQF*DELLVSKPSFYLTQ
Trigger: CTGGGTTAGATAGAATGAGGGCTTGGAAACTAGCAGTTCATCCAAGAACTGGAGTCCACTGAATGAGGCAGGATCTAGGGGACCTGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549897.1
CDS CAA 90 bp CTGCTCCTACGTTCAGCAAAGTGTCATCAGTGGTTGCAGGATTCTTaGCTTCTTTCCTGTCCGTGTAATCTGTCTACTCCTCCAGTGGTC +
Preference number: 6 (lower is better)
Translates to: LLLRSAKCHQWLQDS*LLSCPCNLSTPPVV
Trigger: GACCACTGGAGGAGTAGACAGATTACACGGACAGGAAAGAAGCAAAGAATCCTGCAACCACTGATGACACTTTGCTGAACGTAGGAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549897.1
CDS TCA 72 bp CACGTTGTTCTGAAAATCATTGGGAGCACCAGAAGCTaGATCTTCCATGTGGTATTGCTGGATGTGGCGTCC +
Preference number: 6 (lower is better)
Translates to: HVVLKIIGSTRS*IFHVVLLDVAS
Trigger: GGACGCCACATCCAGCAATACCACATGGAAGATTCAGCTTCTGGTGCTCCCAATGATTTTCAGAACAACGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413095.6
CDS TCA 72 bp CCAAAATCAGGCCACCTGCACCAACAAAGTTCTGTTTaGAGAAGCAGGTTGGAAAAGTGTGGTCTCCTCCTC +
Preference number: 6 (lower is better)
Translates to: PKSGHLHQQSSV*RSRLEKCGLLL
Trigger: GAGGAGGAGACCACACTTTTCCAACCTGCTTCTTCAAACAGAACTTTGTTGGTGCAGGTGGCCTGATTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549307.5
CDS TCA 72 bp GAGGAACTTGGCTGTTTCATCATCCCAGTCGAAGGCTaGTTGGTAGTAGCCGAGATAGAGGACTTCACCTTT +
Preference number: 6 (lower is better)
Translates to: EELGCFIIPVEG*LVVAEIEDFTF
Trigger: AAAGGTGAAGTCCTCTATCTCGGCTACTACCAATCAGCCTTCGACTGGGATGATGAAACAGCCAAGTTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551035.5
CDS CAA 72 bp GCCAAAATCAGGCCACCTGCACCAACAAAGTTCTGTTaGAAGAAGCAGGTTGGAAAAGTGTGGTCTCCTCCT +
Preference number: 6 (lower is better)
Translates to: AKIRPPAPTKFC*KKQVGKVWSPP
Trigger: AGGAGGAGACCACACTTTTCCAACCTGCTTCTTCAAACAGAACTTTGTTGGTGCAGGTGGCCTGATTTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549307.5
CDS CAA 72 bp CCCCTAGATCCTGCCTCATTCAGTGGACTCCAGTTCTaGGATGAACTGCTAGTTTCCAAGCCCTCATTCTAT +
Preference number: 6 (lower is better)
Translates to: PLDPASFSGLQF*DELLVSKPSFY
Trigger: ATAGAATGAGGGCTTGGAAACTAGCAGTTCATCCAAGAACTGGAGTCCACTGAATGAGGCAGGATCTAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549897.1
CDS TCA 72 bp GTGGTAGCGTTTAAGACGATGCTGCTTGGAGGCCTTTaGTCTCTGAATCTTCCATGTGGTATTGCTGGATGT +
Preference number: 6 (lower is better)
Translates to: VVAFKTMLLGGL*SLNLPCGIAGC
Trigger: ACATCCAGCAATACCACATGGAAGATTCAGAGATCAAAGGCCTCCAAGCAGCATCGTCTTAAACGCTACCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552787.5
CDS GCA 72 bp ACCTGCTCCTACGTTCAGCAAAGTGTCATCAGTGGTTaGAGGATTCTTTGCTTCTTTCCTGTCCGTGTAATC +
Preference number: 6 (lower is better)
Translates to: TCSYVQQSVISG*RILCFFPVRVI
Trigger: GATTACACGGACAGGAAAGAAGCAAAGAATCCTGCAACCACTGATGACACTTTGCTGAACGTAGGAGCAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549897.1
CDS CAA 72 bp TCTGGACTCTGTTTTTCCTCCAGTCTTTTGATGAGTTaGTTGAGAGTGGATGTGAGAGCCAGCATTGCCCGA +
Preference number: 6 (lower is better)
Translates to: SGLCFSSSLLMS*LRVDVRASIAR
Trigger: TCGGGCAATGCTGGCTCTCACATCCACTCTCAACAAACTCATCAAAAGACTGGAGGAAAAACAGAGTCCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000257966.12
ENST00000315970.12
ENST00000389142.9
ENST00000389146.10
ENST00000413095.6
ENST00000435406.6
ENST00000439210.6
ENST00000549307.5
ENST00000550202.1
ENST00000551035.5
ENST00000552285.5
CDS TCA 72 bp AGATCCTGCCTCATTCAGTGGACTCCAGTTCTTGGATaGACTGCTAGTTTCCAAGCCCTCATTCTATCTAAC +
Preference number: 6 (lower is better)
Translates to: RSCLIQWTPVLG*TASFQALILSN
Trigger: GTTAGATAGAATGAGGGCTTGGAAACTAGCAGTTCATCCAAGAACTGGAGTCCACTGAATGAGGCAGGATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549897.1
CDS CCA 72 bp TCAGTAAGGAGGGAGGGCTGCTTTCCTTCTGTGACTTaGAGAGATATCTCTAAAGTCTGTTTTCCACTTGTG +
Preference number: 6 (lower is better)
Translates to: SVRREGCFPSVT*RDISKVCFPLV
Trigger: CACAAGTGGAAAACAGACTTTAGAGATATCTCTCCAAGTCACAGAAGGAAAGCAGCCCTCCCTCCTTACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549307.5
ENST00000552423.1
CDS CCA 72 bp ACCCTATTCCTATTTGTAAACGTGGCTCCAAGGTCCTaGGGAGGTGGATCACGACGATTAGAAATATCAATC +
Preference number: 6 (lower is better)
Translates to: TLFLFVNVAPRS*GGGSRRLEISI
Trigger: GATTGATATTTCTAATCGTCGTGATCCACCTCCCCAGGACCTTGGAGCCACGTTTACAAATAGGAATAGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552285.5
CDS CAA 72 bp CGTTCAGCAAAGTGTCATCAGTGGTTGCAGGATTCTTaGCTTCTTTCCTGTCCGTGTAATCTGTCTACTCCT +
Preference number: 6 (lower is better)
Translates to: RSAKCHQWLQDS*LLSCPCNLSTP
Trigger: AGGAGTAGACAGATTACACGGACAGGAAAGAAGCAAAGAATCCTGCAACCACTGATGACACTTTGCTGAACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549897.1
CDS GCA 72 bp TCTCAATTCTCCAGACTTTCAGTAAGGAGGGAGGGCTaGTTTCCTTCTGTGACTTGGAGAGATATCTCTAAA +
Preference number: 6 (lower is better)
Translates to: SQFSRLSVRREG*FPSVTWRDISK
Trigger: TTTAGAGATATCTCTCCAAGTCACAGAAGGAAAGCAGCCCTCCCTCCTTACTGAAAGTCTGGAGAATTGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549307.5
ENST00000552423.1
CDS CCA 72 bp ACAAAGTTCTGTTTGAAGAAGCAGGTTGGAAAAGTGTaGTCTCCTCCTCCATATGTTGGGACTTTAAAGACA +
Preference number: 6 (lower is better)
Translates to: TKFCLKKQVGKV*SPPPYVGTLKT
Trigger: TGTCTTTAAAGTCCCAACATATGGAGGAGGAGACCACACTTTTCCAACCTGCTTCTTCAAACAGAACTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549307.5
CDS TCA 72 bp TTTAGAATATCTGATGTCCACACCCATAGGACACTATaGAATGGACACAAGGGGATACAAGAAGAAGAAATA +
Preference number: 6 (lower is better)
Translates to: FRISDVHTHRTL*NGHKGIQEEEI
Trigger: TATTTCTTCTTCTTGTATCCCCTTGTGTCCATTTCATAGTGTCCTATGGGTGTGGACATCAGATATTCTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549307.5