RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ORC1 (Homo sapiens)

Ensembl gene IDs: ENSG00000085840

Ensembl transcript IDs: ENST00000371566.1, ENST00000371568.8

Found 279 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR CCA 90 bp CAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCCTGTCTCTACTCCAGCACACTGGCTaGCTCCTGGGCAGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: QNQMLCRLAWQHGEALSLLQHTG*LLGSQA
Trigger: AGCCTGGCTGCCCAGGAGCCAGCCAGTGTGCTGGAG...TAGAGACAGGGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR TCA 90 bp CAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCCTGTCTCTAAGGACGGTGGTTTCCTaGGGTGACCCTCGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: QNQMLCRLAWQHGEALSLRTVVS*GDPRVQ
Trigger: CTGCACCCGAGGGTCACCTCAGGAAACCACCGTCCT...TAGAGACAGGGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR TCA 90 bp CAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCCTGTCTCTACACGGCCATGGTCTCTaGCATGGTGGGGTACGGCAG +
Preference number: 4 (lower is better)
Translates to: QNQMLCRLAWQHGEALSLHGHGL*HGGVRQ
Trigger: CTGCCGTACCCCACCATGTCAGAGACCATGGCCGTG...TAGAGACAGGGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CCA 90 bp ATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCCTCCAGCACACTGGCTaGCTCCTGGGCAGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: MYFQNQMLCRLAWQHGEALQHTG*LLGSQA
Trigger: AGCCTGGCTGCCCAGGAGCCAGCCAGTGTGCTGGAG...GGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR TCA 90 bp CAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCCTGTCTCTACTTCGACTACGGATCTaGGGAGCGGCACAACGTGGC +
Preference number: 4 (lower is better)
Translates to: QNQMLCRLAWQHGEALSLLRLRI*GAAQRG
Trigger: GCCACGTTGTGCCGCTCCTCAGATCCGTAGTCGAAG...TAGAGACAGGGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR TCA 90 bp CAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCCTGTCTCTATTGAGTGGGCTATGGTaGCCAGGCCAGGGGAGTCAG +
Preference number: 4 (lower is better)
Translates to: QNQMLCRLAWQHGEALSLLSGLW*PGQGSQ
Trigger: CTGACTCCCCTGGCCTGGTCACCATAGCCCACTCAA...TAGAGACAGGGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR TCA 90 bp ATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCCACGGCCATGGTCTCTaGCATGGTGGGGTACGGCAG +
Preference number: 4 (lower is better)
Translates to: MYFQNQMLCRLAWQHGEAHGHGL*HGGVRQ
Trigger: CTGCCGTACCCCACCATGTCAGAGACCATGGCCGTG...GGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR GCA 90 bp CAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCCTGTCTCTACCTTGTGGGGTAGTGTaGCATGGCCGGCTCCAAAGC +
Preference number: 4 (lower is better)
Translates to: QNQMLCRLAWQHGEALSLPCGVV*HGRLQS
Trigger: GCTTTGGAGCCGGCCATGGCACACTACCCCACAAGG...TAGAGACAGGGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371566.1
CDS-3UTR GCA 90 bp CAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCCTGTCTCTATCTCTGTGGCACGCCTaGAGATGTCCAGGCACCGTC +
Preference number: 4 (lower is better)
Translates to: QNQMLCRLAWQHGEALSLSLWHA*RCPGTV
Trigger: GACGGTGCCTGGACATCTGCAGGCGTGCCACAGAGA...TAGAGACAGGGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR TCA 90 bp CAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCCTGTCTCTACACGGATGGCACCACTaGAGATCTCTGTCCCCCACT +
Preference number: 4 (lower is better)
Translates to: QNQMLCRLAWQHGEALSLHGWHH*RSLSPT
Trigger: AGTGGGGGACAGAGATCTTCAGTGGTGCCATCCGTG...TAGAGACAGGGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR TCA 90 bp ATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCCTTCGACTACGGATCTaGGGAGCGGCACAACGTGGC +
Preference number: 4 (lower is better)
Translates to: MYFQNQMLCRLAWQHGEALRLRI*GAAQRG
Trigger: GCCACGTTGTGCCGCTCCTCAGATCCGTAGTCGAAG...GGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR TCA 90 bp CAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCCTGTCTCTAGGTGGTTTCCTGAGGTaGCCCTCGGGTGCAGAATTG +
Preference number: 4 (lower is better)
Translates to: QNQMLCRLAWQHGEALSLGGFLR*PSGAEL
Trigger: CAATTCTGCACCCGAGGGTCACCTCAGGAAACCACC...TAGAGACAGGGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR TCA 90 bp TCCATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAAGGACGGTGGTTTCCTaGGGTGACCCTCGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: SMYFQNQMLCRLAWQHGERTVVS*GDPRVQ
Trigger: CTGCACCCGAGGGTCACCTCAGGAAACCACCGTCCT...TTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR TCA 90 bp ATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCTTGAGTGGGCTATGGTaGCCAGGCCAGGGGAGTCAG +
Preference number: 4 (lower is better)
Translates to: MYFQNQMLCRLAWQHGEALSGLW*PGQGSQ
Trigger: CTGACTCCCCTGGCCTGGTCACCATAGCCCACTCAA...GGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR TCA 90 bp ATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCGGCTTCCTCCAGTCCTaGTCGACGGAACTCTGCGAG +
Preference number: 4 (lower is better)
Translates to: MYFQNQMLCRLAWQHGEAGFLQS*STELCE
Trigger: CTCGCAGAGTTCCGTCGATCAGGACTGGAGGAAGCC...GGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR GCA 90 bp CAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCCTGTCTCTAGCTTGGGCTGCCTGCTaGAGGCAGCGTATCACTTCA +
Preference number: 4 (lower is better)
Translates to: QNQMLCRLAWQHGEALSLAWAAC*RQRITS
Trigger: TGAAGTGATACGCTGCCTGCAGCAGGCAGCCCAAGC...TAGAGACAGGGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR GCA 90 bp CAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCCTGTCTCTATTGGCTTGGGCTGCCTaGTGCAGGCAGCGTATCACT +
Preference number: 4 (lower is better)
Translates to: QNQMLCRLAWQHGEALSLLAWAA*CRQRIT
Trigger: AGTGATACGCTGCCTGCAGCAGGCAGCCCAAGCCAA...TAGAGACAGGGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR GCA 90 bp ATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCGTCCAGGCACCGTCGTaGATCTCCAGACAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: MYFQNQMLCRLAWQHGEAVQAPS*ISRQCC
Trigger: GCAGCACTGTCTGGAGATGCACGACGGTGCCTGGAC...GGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR GCA 90 bp ATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCTCTCTGTGGCACGCCTaGAGATGTCCAGGCACCGTC +
Preference number: 4 (lower is better)
Translates to: MYFQNQMLCRLAWQHGEASLWHA*RCPGTV
Trigger: GACGGTGCCTGGACATCTGCAGGCGTGCCACAGAGA...GGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CCA 90 bp CAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCCTGTCTCTAGGCCACATGTTCTGCTaGGGTCCAAGAAGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: QNQMLCRLAWQHGEALSLGHMFC*GPRRAL
Trigger: GAGAGCCCTTCTTGGACCCCAGCAGAACATGTGGCC...TAGAGACAGGGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CCA 90 bp ATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCGCAGATCGTTCCTGCTaGGCTCCACAAGCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: MYFQNQMLCRLAWQHGEAADRSC*APQAGG
Trigger: GCCTCCTGCTTGTGGAGCCCAGCAGGAACGATCTGC...GGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR TCA 90 bp ATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCAGCCGGGCCTCCTTATaGGTGGGCCAGTCAAAGAGA +
Preference number: 4 (lower is better)
Translates to: MYFQNQMLCRLAWQHGEASRASL*VGQSKR
Trigger: TCTCTTTGACTGGCCCACTCATAAGGAGGCCCGGCT...GGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR TCA 90 bp CAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCCTGTCTCTAACACCCGGTTCATCATaGTTCGCTCTGGCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: QNQMLCRLAWQHGEALSLTPGSS*FALAGP
Trigger: TGGACCTGCCAGAGCGAATCATGATGAACCGGGTGT...TAGAGACAGGGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR TCA 90 bp TCCATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGGCTTCCTCCAGTCCTaGTCGACGGAACTCTGCGAG +
Preference number: 4 (lower is better)
Translates to: SMYFQNQMLCRLAWQHGEGFLQS*STELCE
Trigger: CTCGCAGAGTTCCGTCGATCAGGACTGGAGGAAGCC...TTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR GCA 90 bp ATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCTTGGCTTGGGCTGCCTaGTGCAGGCAGCGTATCACT +
Preference number: 4 (lower is better)
Translates to: MYFQNQMLCRLAWQHGEALAWAA*CRQRIT
Trigger: AGTGATACGCTGCCTGCAGCAGGCAGCCCAAGCCAA...GGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR GCA 90 bp CAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCCTGTCTCTACTTTGCCAGCAGTTCTaGCGCATGGTTGGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: QNQMLCRLAWQHGEALSLLCQQF*RMVGCC
Trigger: GCAACAGCCAACCATGCGGCAGAACTGCTGGCAAAG...TAGAGACAGGGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR GCA 90 bp CAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCCTGTCTCTAGAGGTGACCCTCGGGTaGAGAATTGCTTTGCCAGCA +
Preference number: 4 (lower is better)
Translates to: QNQMLCRLAWQHGEALSLEVTLG*RIALPA
Trigger: TGCTGGCAAAGCAATTCTGCACCCGAGGGTCACCTC...TAGAGACAGGGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR GCA 90 bp CAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCCTGTCTCTACATTGTGTTGGCAATTaGCAGGACCACAAGCCGGGC +
Preference number: 4 (lower is better)
Translates to: QNQMLCRLAWQHGEALSLHCVGN*QDHKPG
Trigger: GCCCGGCTTGTGGTCCTGGCAATTGCCAACACAATG...TAGAGACAGGGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR GCA 90 bp TCCATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGTCCAGGCACCGTCGTaGATCTCCAGACAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: SMYFQNQMLCRLAWQHGEVQAPS*ISRQCC
Trigger: GCAGCACTGTCTGGAGATGCACGACGGTGCCTGGAC...TTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR GCA 90 bp ATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCCCTTGTGGGGTAGTGTaGCATGGCTTCCGGCTCCAA +
Preference number: 4 (lower is better)
Translates to: MYFQNQMLCRLAWQHGEAPCGVV*HGFRLQ
Trigger: TTGGAGCCGGAAGCCATGGCACACTACCCCACAAGG...GGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371568.8
CDS-3UTR CCA 90 bp ATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCGGCCACATGTTCTGCTaGGGTCCAAGAAGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: MYFQNQMLCRLAWQHGEAGHMFC*GPRRAL
Trigger: GAGAGCCCTTCTTGGACCCCAGCAGAACATGTGGCC...GGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CCA 90 bp CAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCCTGTCTCTATTGGAAGGGGCGGTGTaGAAGCCTCTTCTTCGTCAC +
Preference number: 4 (lower is better)
Translates to: QNQMLCRLAWQHGEALSLLEGAV*KPLLRH
Trigger: GTGACGAAGAAGAGGCTTCCACACCGCCCCTTCCAA...TAGAGACAGGGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CCA 90 bp TCCATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAATCTGGGTGCTCTCCTTaGAAGGGGCGGTGTGGAAGC +
Preference number: 4 (lower is better)
Translates to: SMYFQNQMLCRLAWQHGESGCSP*KGRCGS
Trigger: GCTTCCACACCGCCCCTTCCAAGGAGAGCACCCAGA...TTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CCA 90 bp CAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCCTGTCTCTAAGGAGCGGCACAACGTaGCGTTCTAGGCTTGAGACT +
Preference number: 4 (lower is better)
Translates to: QNQMLCRLAWQHGEALSLRSGTT*RSRLET
Trigger: AGTCTCAAGCCTAGAACGCCACGTTGTGCCGCTCCT...TAGAGACAGGGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CCA 90 bp ATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCGGAACATCATTGGCTTaGGCTGCCTGCTGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: MYFQNQMLCRLAWQHGEAGTSLA*AACCRQ
Trigger: CTGCCTGCAGCAGGCAGCCCAAGCCAATGATGTTCC...GGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CCA 90 bp TCCATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCAGATCGTTCCTGCTaGGCTCCACAAGCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: SMYFQNQMLCRLAWQHGEADRSC*APQAGG
Trigger: GCCTCCTGCTTGTGGAGCCCAGCAGGAACGATCTGC...TTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CCA 90 bp CAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCCTGTCTCTATACAGCACATCATCCTaGCTGACGTTGAGCCGCACC +
Preference number: 4 (lower is better)
Translates to: QNQMLCRLAWQHGEALSLYSTSS*LTLSRT
Trigger: GGTGCGGCTCAACGTCAGCCAGGATGATGTGCTGTA...TAGAGACAGGGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR TCA 90 bp CAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCCTGTCTCTAGTCTGCTGGGACATCTaGGGGTTACCTAAGTTGCCA +
Preference number: 4 (lower is better)
Translates to: QNQMLCRLAWQHGEALSLVCWDI*GLPKLP
Trigger: TGGCAACTTAGGTAACCCTCAGATGTCCCAGCAGAC...TAGAGACAGGGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR TCA 90 bp CAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCCTGTCTCTAATCCAAGGAGGCACATaGAGTCTGCTGGGACATCTG +
Preference number: 4 (lower is better)
Translates to: QNQMLCRLAWQHGEALSLIQGGT*SLLGHL
Trigger: CAGATGTCCCAGCAGACTTCATGTGCCTCCTTGGAT...TAGAGACAGGGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR TCA 90 bp CAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCCTGTCTCTAGTCACTGCTAGAGTCTaGAATCTCTGCTGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: QNQMLCRLAWQHGEALSLVTARV*NLCCWQ
Trigger: CTGCCAGCAGCAGAGATTTCAGACTCTAGCAGTGAC...TAGAGACAGGGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR TCA 90 bp TCCATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGGTGGTTTCCTGAGGTaGCCCTCGGGTGCAGAATTG +
Preference number: 4 (lower is better)
Translates to: SMYFQNQMLCRLAWQHGEGGFLR*PSGAEL
Trigger: CAATTCTGCACCCGAGGGTCACCTCAGGAAACCACC...TTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR GCA 90 bp CAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCCTGTCTCTATTCCGGCCCAACAAATaGCGTTTACAGGCAGGGACT +
Preference number: 4 (lower is better)
Translates to: QNQMLCRLAWQHGEALSLFRPNK*RLQAGT
Trigger: AGTCCCTGCCTGTAAACGGCATTTGTTGGGCCGGAA...TAGAGACAGGGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR GCA 90 bp CAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCCTGTCTCTACCAGAATATTTCCTGTaGACCAGGCTTCCGGCCCAA +
Preference number: 4 (lower is better)
Translates to: QNQMLCRLAWQHGEALSLPEYFL*TRLPAQ
Trigger: TTGGGCCGGAAGCCTGGTGCACAGGAAATATTCTGG...TAGAGACAGGGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR GCA 90 bp TCCATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCTTGGGCTGCCTGCTaGAGGCAGCGTATCACTTCA +
Preference number: 4 (lower is better)
Translates to: SMYFQNQMLCRLAWQHGEAWAAC*RQRITS
Trigger: TGAAGTGATACGCTGCCTGCAGCAGGCAGCCCAAGC...TTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR GCA 90 bp ATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCCCTCGGGTGCAGAATTaGTTTGCCAGCAGTTCTGCC +
Preference number: 4 (lower is better)
Translates to: MYFQNQMLCRLAWQHGEAPRVQN*FASSSA
Trigger: GGCAGAACTGCTGGCAAAGCAATTCTGCACCCGAGG...GGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR GCA 90 bp ATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCCATTGTGTTGGCAATTaGCAGGACCACAAGCCGGGC +
Preference number: 4 (lower is better)
Translates to: MYFQNQMLCRLAWQHGEAHCVGN*QDHKPG
Trigger: GCCCGGCTTGTGGTCCTGGCAATTGCCAACACAATG...GGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR GCA 90 bp CAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCCTGTCTCTAATCTCCAGACAGTGCTaGTACCTTCCTGGCTACCAG +
Preference number: 4 (lower is better)
Translates to: QNQMLCRLAWQHGEALSLISRQC*YLPGYQ
Trigger: CTGGTAGCCAGGAAGGTAGCAGCACTGTCTGGAGAT...TAGAGACAGGGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR GCA 90 bp ATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCGGGGAGTCAGGCTTCTaGTGGGAGAACTCACAGATC +
Preference number: 4 (lower is better)
Translates to: MYFQNQMLCRLAWQHGEAGESGF*WENSQI
Trigger: GATCTGTGAGTTCTCCCAGCAGAAGCCTGACTCCCC...GGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR GCA 90 bp CAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCCTGTCTCTAGCAGTCCCTCCATTCTaGACAGTGCCACATGTTGAC +
Preference number: 4 (lower is better)
Translates to: QNQMLCRLAWQHGEALSLAVPPF*TVPHVD
Trigger: GTCAACATGTGGCACTGTGCAGAATGGAGGGACTGC...TAGAGACAGGGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR GCA 90 bp TCCATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGGAGCAGATCGTTCCTaGTGGGCTCCACAAGCAGGA +
Preference number: 4 (lower is better)
Translates to: SMYFQNQMLCRLAWQHGEGADRS*WAPQAG
Trigger: TCCTGCTTGTGGAGCCCAGCAGGAACGATCTGCTCC...TTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CCA 90 bp CAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCCTGTCTCTACGGGTTTCTGGCACTTaGCTGCACTCTCTTGTGGTT +
Preference number: 4 (lower is better)
Translates to: QNQMLCRLAWQHGEALSLRVSGT*LHSLVV
Trigger: AACCACAAGAGAGTGCAGCCAAGTGCCAGAAACCCG...TAGAGACAGGGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CCA 90 bp CAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCCTGTCTCTACTGCACTCTTACTCTTaGCTCTCACGGGTTTCTGGC +
Preference number: 4 (lower is better)
Translates to: QNQMLCRLAWQHGEALSLLHSYS*LSRVSG
Trigger: GCCAGAAACCCGTGAGAGCCAAGAGTAAGAGTGCAG...TAGAGACAGGGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CCA 90 bp ATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCGGATGGGTAGGAGTTTaGCGAGATTTGGAGGCGGAG +
Preference number: 4 (lower is better)
Translates to: MYFQNQMLCRLAWQHGEAGWVGV*RDLEAE
Trigger: CTCCGCCTCCAAATCTCGCCAAACTCCTACCCATCC...GGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CCA 90 bp CAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCCTGTCTCTAAAGATCGCAGGTTCCTaGACACAGTTCTGGGTGCTC +
Preference number: 4 (lower is better)
Translates to: QNQMLCRLAWQHGEALSLKIAGS*TQFWVL
Trigger: GAGCACCCAGAACTGTGTCCAGGAACCTGCGATCTT...TAGAGACAGGGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CCA 90 bp CAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCCTGTCTCTAGTTCTGCCGCATGGTTaGCTGTTGCTTTTTGGCCTG +
Preference number: 4 (lower is better)
Translates to: QNQMLCRLAWQHGEALSLVLPHG*LLLFGL
Trigger: CAGGCCAAAAAGCAACAGCCAACCATGCGGCAGAAC...TAGAGACAGGGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CCA 90 bp CAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCCTGTCTCTAACTCACAGATCTCTGTaGCACGCCTGCAGATGTCCA +
Preference number: 4 (lower is better)
Translates to: QNQMLCRLAWQHGEALSLTHRSL*HACRCP
Trigger: TGGACATCTGCAGGCGTGCCACAGAGATCTGTGAGT...TAGAGACAGGGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CCA 90 bp CAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCCTGTCTCTAGGAACTCTGCGAGGATaGCTCTCAGGAAGCTCTGTT +
Preference number: 4 (lower is better)
Translates to: QNQMLCRLAWQHGEALSLGTLRG*LSGSSV
Trigger: AACAGAGCTTCCTGAGAGCCATCCTCGCAGAGTTCC...TAGAGACAGGGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR TCA 90 bp TCCATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGGAGGCGGAGTGCCTTaGTTCAATCCTTTTGGCCAC +
Preference number: 4 (lower is better)
Translates to: SMYFQNQMLCRLAWQHGEGGGVP*FNPFGH
Trigger: GTGGCCAAAAGGATTGAATCAAGGCACTCCGCCTCC...TTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR TCA 90 bp ATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCATCCAAGGAGGCACATaGAGTCTGCTGGGACATCTG +
Preference number: 4 (lower is better)
Translates to: MYFQNQMLCRLAWQHGEAIQGGT*SLLGHL
Trigger: CAGATGTCCCAGCAGACTTCATGTGCCTCCTTGGAT...GGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR TCA 90 bp CAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCCTGTCTCTAAGATCTCTTAGAAGGTaGGGTGATCTCCGAGAAGGC +
Preference number: 4 (lower is better)
Translates to: QNQMLCRLAWQHGEALSLRSLRR*GDLREG
Trigger: GCCTTCTCGGAGATCACCTCACCTTCTAAGAGATCT...TAGAGACAGGGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR TCA 90 bp ATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCAGGCCTTTAGATGCTTaGGCCGGGACCTTAGGATCT +
Preference number: 4 (lower is better)
Translates to: MYFQNQMLCRLAWQHGEARPLDA*AGTLGS
Trigger: AGATCCTAAGGTCCCGGCTCAAGCATCTAAAGGCCT...GGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR TCA 90 bp ATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCATCCACAGCTTCCATTaGGTGGGCTATGGTGACCAG +
Preference number: 4 (lower is better)
Translates to: MYFQNQMLCRLAWQHGEAIHSFH*VGYGDQ
Trigger: CTGGTCACCATAGCCCACTCAATGGAAGCTGTGGAT...GGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR GCA 90 bp ATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCTTCCGGCCCAACAAATaGCGTTTACAGGCAGGGACT +
Preference number: 4 (lower is better)
Translates to: MYFQNQMLCRLAWQHGEAFRPNK*RLQAGT
Trigger: AGTCCCTGCCTGTAAACGGCATTTGTTGGGCCGGAA...GGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR GCA 90 bp ATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCTTTGGCCACATGTTCTaGTGGGGTCCAAGAAGGGCT +
Preference number: 4 (lower is better)
Translates to: MYFQNQMLCRLAWQHGEAFGHMF*WGPRRA
Trigger: AGCCCTTCTTGGACCCCAGCAGAACATGTGGCCAAA...GGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR GCA 90 bp TCCATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAACTTTGCCAGCAGTTCTaGCGCATGGTTGGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: SMYFQNQMLCRLAWQHGELCQQF*RMVGCC
Trigger: GCAACAGCCAACCATGCGGCAGAACTGCTGGCAAAG...TTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR GCA 90 bp ATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCGGTGCAGAATTGCTTTaGCAGCAGTTCTGCCGCATG +
Preference number: 4 (lower is better)
Translates to: MYFQNQMLCRLAWQHGEAGAELL*QQFCRM
Trigger: CATGCGGCAGAACTGCTGGCAAAGCAATTCTGCACC...GGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR GCA 90 bp TCCATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAACCTCGGGTGCAGAATTaGTTTGCCAGCAGTTCTGCC +
Preference number: 4 (lower is better)
Translates to: SMYFQNQMLCRLAWQHGEPRVQN*FASSSA
Trigger: GGCAGAACTGCTGGCAAAGCAATTCTGCACCCGAGG...TTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR GCA 90 bp TCCATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGAGGTGACCCTCGGGTaGAGAATTGCTTTGCCAGCA +
Preference number: 4 (lower is better)
Translates to: SMYFQNQMLCRLAWQHGEEVTLG*RIALPA
Trigger: TGCTGGCAAAGCAATTCTGCACCCGAGGGTCACCTC...TTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR GCA 90 bp CAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCCTGTCTCTACGGGACCTTAGGATCTaGTGCAGCTGGCTATATGTA +
Preference number: 4 (lower is better)
Translates to: QNQMLCRLAWQHGEALSLRDLRI*CSWLYV
Trigger: TACATATAGCCAGCTGCAGCAGATCCTAAGGTCCCG...TAGAGACAGGGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR GCA 90 bp CAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCCTGTCTCTATCAAAGGCCTTTAGATaGTTGAGCCGGGACCTTAGG +
Preference number: 4 (lower is better)
Translates to: QNQMLCRLAWQHGEALSLSKAFR*LSRDLR
Trigger: CCTAAGGTCCCGGCTCAAGCATCTAAAGGCCTTTGA...TAGAGACAGGGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR GCA 90 bp ATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCTGCATCTCCAGACAGTaGTGCTACCTTCCTGGCTAC +
Preference number: 4 (lower is better)
Translates to: MYFQNQMLCRLAWQHGEACISRQ*CYLPGY
Trigger: GTAGCCAGGAAGGTAGCAGCACTGTCTGGAGATGCA...GGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR GCA 90 bp TCCATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGGGGAGTCAGGCTTCTaGTGGGAGAACTCACAGATC +
Preference number: 4 (lower is better)
Translates to: SMYFQNQMLCRLAWQHGEGESGF*WENSQI
Trigger: GATCTGTGAGTTCTCCCAGCAGAAGCCTGACTCCCC...TTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CCA 90 bp ATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCCGGGTTTCTGGCACTTaGCTGCACTCTCTTGTGGTT +
Preference number: 4 (lower is better)
Translates to: MYFQNQMLCRLAWQHGEARVSGT*LHSLVV
Trigger: AACCACAAGAGAGTGCAGCCAAGTGCCAGAAACCCG...GGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CCA 90 bp ATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCCTGCACTCTTACTCTTaGCTCTCACGGGTTTCTGGC +
Preference number: 4 (lower is better)
Translates to: MYFQNQMLCRLAWQHGEALHSYS*LSRVSG
Trigger: GCCAGAAACCCGTGAGAGCCAAGAGTAAGAGTGCAG...GGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CCA 90 bp ATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCCCTCTTTCTGGCTCTTaGGGTAAGAGGATGGGTAGG +
Preference number: 4 (lower is better)
Translates to: MYFQNQMLCRLAWQHGEAPLSGS*GKRMGR
Trigger: CCTACCCATCCTCTTACCCCAAGAGCCAGAAAGAGG...GGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CCA 90 bp CAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCCTGTCTCTACTCTCTGGTTTTCTCTaGGGCTTTCAGAGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: QNQMLCRLAWQHGEALSLLSGFL*GFQSWR
Trigger: TCTCCAGCTCTGAAAGCCCCAGAGAAAACCAGAGAG...TAGAGACAGGGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CCA 90 bp TCCATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAATTGGAAGGGGCGGTGTaGAAGCCTCTTCTTCGTCAC +
Preference number: 4 (lower is better)
Translates to: SMYFQNQMLCRLAWQHGELEGAV*KPLLRH
Trigger: GTGACGAAGAAGAGGCTTCCACACCGCCCCTTCCAA...TTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CCA 90 bp TCCATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAATCCTGGACACAGTTCTaGGTGCTCTCCTTGGAAGGG +
Preference number: 4 (lower is better)
Translates to: SMYFQNQMLCRLAWQHGESWTQF*VLSLEG
Trigger: CCCTTCCAAGGAGAGCACCCAGAACTGTGTCCAGGA...TTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CCA 90 bp ATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCAAGATCGCAGGTTCCTaGACACAGTTCTGGGTGCTC +
Preference number: 4 (lower is better)
Translates to: MYFQNQMLCRLAWQHGEAKIAGS*TQFWVL
Trigger: GAGCACCCAGAACTGTGTCCAGGAACCTGCGATCTT...GGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CCA 90 bp TCCATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAAGGAGCGGCACAACGTaGCGTTCTAGGCTTGAGACT +
Preference number: 4 (lower is better)
Translates to: SMYFQNQMLCRLAWQHGERSGTT*RSRLET
Trigger: AGTCTCAAGCCTAGAACGCCACGTTGTGCCGCTCCT...TTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CCA 90 bp CAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCCTGTCTCTATCACTTCATGAACAGTaGCAGTCTTCCCTGTCCCAG +
Preference number: 4 (lower is better)
Translates to: QNQMLCRLAWQHGEALSLSLHEQ*QSSLSQ
Trigger: CTGGGACAGGGAAGACTGCCACTGTTCATGAAGTGA...TAGAGACAGGGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CCA 90 bp TCCATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAAGGGAGGAACATCATTaGCTTGGGCTGCCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: SMYFQNQMLCRLAWQHGEREEHH*LGLPAA
Trigger: TGCAGCAGGCAGCCCAAGCCAATGATGTTCCTCCCT...TTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CCA 90 bp ATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCGTTCTGCCGCATGGTTaGCTGTTGCTTTTTGGCCTG +
Preference number: 4 (lower is better)
Translates to: MYFQNQMLCRLAWQHGEAVLPHG*LLLFGL
Trigger: CAGGCCAAAAAGCAACAGCCAACCATGCGGCAGAAC...GGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CCA 90 bp CAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCCTGTCTCTACATCATGATTCGCTCTaGCAGGTCCATTGTGTTGGC +
Preference number: 4 (lower is better)
Translates to: QNQMLCRLAWQHGEALSLHHDSL*QVHCVG
Trigger: GCCAACACAATGGACCTGCCAGAGCGAATCATGATG...TAGAGACAGGGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CCA 90 bp ATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCACAGCTTCCATTGAGTaGGCTATGGTGACCAGGCCA +
Preference number: 4 (lower is better)
Translates to: MYFQNQMLCRLAWQHGEATASIE*AMVTRP
Trigger: TGGCCTGGTCACCATAGCCCACTCAATGGAAGCTGT...GGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CCA 90 bp ATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCGGAACTCTGCGAGGATaGCTCTCAGGAAGCTCTGTT +
Preference number: 4 (lower is better)
Translates to: MYFQNQMLCRLAWQHGEAGTLRG*LSGSSV
Trigger: AACAGAGCTTCCTGAGAGCCATCCTCGCAGAGTTCC...GGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CCA 90 bp TCCATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAATGGGGTAGTGTGCCATaGCTTCCGGCTCCAAAGCTT +
Preference number: 4 (lower is better)
Translates to: SMYFQNQMLCRLAWQHGEWGSVP*LPAPKL
Trigger: AAGCTTTGGAGCCGGAAGCCATGGCACACTACCCCA...TTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371568.8
CDS-3UTR TCA 90 bp ATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCAGATCTCTTAGAAGGTaGGGTGATCTCCGAGAAGGC +
Preference number: 4 (lower is better)
Translates to: MYFQNQMLCRLAWQHGEARSLRR*GDLREG
Trigger: GCCTTCTCGGAGATCACCTCACCTTCTAAGAGATCT...GGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR TCA 90 bp TCCATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGTCACTGCTAGAGTCTaGAATCTCTGCTGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: SMYFQNQMLCRLAWQHGEVTARV*NLCCWQ
Trigger: CTGCCAGCAGCAGAGATTTCAGACTCTAGCAGTGAC...TTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR TCA 90 bp ATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCCAGCGTATCACTTCATaGACAGTGGCAGTCTTCCCT +
Preference number: 4 (lower is better)
Translates to: MYFQNQMLCRLAWQHGEAQRITS*TVAVFP
Trigger: AGGGAAGACTGCCACTGTTCATGAAGTGATACGCTG...GGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR TCA 90 bp TCCATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAAGGCCTTTAGATGCTTaGGCCGGGACCTTAGGATCT +
Preference number: 4 (lower is better)
Translates to: SMYFQNQMLCRLAWQHGERPLDA*AGTLGS
Trigger: AGATCCTAAGGTCCCGGCTCAAGCATCTAAAGGCCT...TTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR TCA 90 bp TCCATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAATCCACAGCTTCCATTaGGTGGGCTATGGTGACCAG +
Preference number: 4 (lower is better)
Translates to: SMYFQNQMLCRLAWQHGEIHSFH*VGYGDQ
Trigger: CTGGTCACCATAGCCCACTCAATGGAAGCTGTGGAT...TTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR GCA 90 bp TCCATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAATTTGGCCACATGTTCTaGTGGGGTCCAAGAAGGGCT +
Preference number: 4 (lower is better)
Translates to: SMYFQNQMLCRLAWQHGEFGHMF*WGPRRA
Trigger: AGCCCTTCTTGGACCCCAGCAGAACATGTGGCCAAA...TTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR GCA 90 bp CAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCCTGTCTCTAGGGTTCTCAGGATTATaGGATGTTCAGGTGAAGCCT +
Preference number: 4 (lower is better)
Translates to: QNQMLCRLAWQHGEALSLGFSGL*DVQVKP
Trigger: AGGCTTCACCTGAACATCGCATAATCCTGAGAACCC...TAGAGACAGGGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR GCA 90 bp ATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCCGGGACCTTAGGATCTaGTGCAGCTGGCTATATGTA +
Preference number: 4 (lower is better)
Translates to: MYFQNQMLCRLAWQHGEARDLRI*CSWLYV
Trigger: TACATATAGCCAGCTGCAGCAGATCCTAAGGTCCCG...GGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR GCA 90 bp TCCATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAATGCATCTCCAGACAGTaGTGCTACCTTCCTGGCTAC +
Preference number: 4 (lower is better)
Translates to: SMYFQNQMLCRLAWQHGECISRQ*CYLPGY
Trigger: GTAGCCAGGAAGGTAGCAGCACTGTCTGGAGATGCA...TTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR GCA 90 bp TCCATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCAGTCCCTCCATTCTaGACAGTGCCACATGTTGAC +
Preference number: 4 (lower is better)
Translates to: SMYFQNQMLCRLAWQHGEAVPPF*TVPHVD
Trigger: GTCAACATGTGGCACTGTGCAGAATGGAGGGACTGC...TTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CCA 90 bp ATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCGAGTTTGGCGAGATTTaGAGGCGGAGTGCCTTGATT +
Preference number: 4 (lower is better)
Translates to: MYFQNQMLCRLAWQHGEAEFGEI*RRSALI
Trigger: AATCAAGGCACTCCGCCTCCAAATCTCGCCAAACTC...GGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CCA 90 bp ATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCTCACTTCATGAACAGTaGCAGTCTTCCCTGTCCCAG +
Preference number: 4 (lower is better)
Translates to: MYFQNQMLCRLAWQHGEASLHEQ*QSSLSQ
Trigger: CTGGGACAGGGAAGACTGCCACTGTTCATGAAGTGA...GGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CCA 90 bp ATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCAGCAGTTCTGCCGCATaGTTGGCTGTTGCTTTTTGG +
Preference number: 4 (lower is better)
Translates to: MYFQNQMLCRLAWQHGEASSSAA*LAVAFW
Trigger: CCAAAAAGCAACAGCCAACCATGCGGCAGAACTGCT...GGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CCA 90 bp ATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCGCAGGTCCATTGTGTTaGCAATTGCCAGGACCACAA +
Preference number: 4 (lower is better)
Translates to: MYFQNQMLCRLAWQHGEAAGPLC*QLPGPQ
Trigger: TTGTGGTCCTGGCAATTGCCAACACAATGGACCTGC...GGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CCA 90 bp CAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCCTGTCTCTATTCCTGGCTACCAGCTaGATGGCATCATCTTCAAAG +
Preference number: 4 (lower is better)
Translates to: QNQMLCRLAWQHGEALSLFLATS*MASSSK
Trigger: CTTTGAAGATGATGCCATCCAGCTGGTAGCCAGGAA...TAGAGACAGGGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR TCA 90 bp ATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCGGGCCTGCCAACCCATaGATAAGTTTTTCTGGTCTT +
Preference number: 4 (lower is better)
Translates to: MYFQNQMLCRLAWQHGEAGPANP*ISFSGL
Trigger: AAGACCAGAAAAACTTATTCATGGGTTGGCAGGCCC...GGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR TCA 90 bp ATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCTGTCCAATCTGGATGTaGATCTCGGTGGAACAACCT +
Preference number: 4 (lower is better)
Translates to: MYFQNQMLCRLAWQHGEACPIWM*ISVEQP
Trigger: AGGTTGTTCCACCGAGATTCACATCCAGATTGGACA...GGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR TCA 90 bp ATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCTATGCGATGTTCAGGTaGAGCCTTCTTGTCATCCTC +
Preference number: 4 (lower is better)
Translates to: MYFQNQMLCRLAWQHGEAYAMFR*SLLVIL
Trigger: GAGGATGACAAGAAGGCTTCACCTGAACATCGCATA...GGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR TCA 90 bp ATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCTCTTTGGCACCTTCGTaGGGGTATGTAAGGATGACT +
Preference number: 4 (lower is better)
Translates to: MYFQNQMLCRLAWQHGEASLAPS*GYVRMT
Trigger: AGTCATCCTTACATACCCTCACGAAGGTGCCAAAGA...GGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR TCA 90 bp TCCATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAACAGCGTATCACTTCATaGACAGTGGCAGTCTTCCCT +
Preference number: 4 (lower is better)
Translates to: SMYFQNQMLCRLAWQHGEQRITS*TVAVFP
Trigger: AGGGAAGACTGCCACTGTTCATGAAGTGATACGCTG...TTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR GCA 90 bp CAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCCTGTCTCTAGATCCAACAAGGGCCTaGCAACCCATGAATAAGTTT +
Preference number: 4 (lower is better)
Translates to: QNQMLCRLAWQHGEALSLDPTRA*QPMNKF
Trigger: AAACTTATTCATGGGTTGGCAGGCCCTTGTTGGATC...TAGAGACAGGGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR GCA 90 bp CAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCCTGTCTCTAGATTTGGAGGCGGAGTaGCTTGATTCAATCCTTTTG +
Preference number: 4 (lower is better)
Translates to: QNQMLCRLAWQHGEALSLDLEAE*LDSILL
Trigger: CAAAAGGATTGAATCAAGGCACTCCGCCTCCAAATC...TAGAGACAGGGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR GCA 90 bp TCCATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGAGGGTTACCTAAGTTaGCAAGCTCCAGCCTCTTTC +
Preference number: 4 (lower is better)
Translates to: SMYFQNQMLCRLAWQHGEEGYLS*QAPASF
Trigger: GAAAGAGGCTGGAGCTTGGCAACTTAGGTAACCCTC...TTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR GCA 90 bp ATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCGGGTTCTCAGGATTATaGGATGTTCAGGTGAAGCCT +
Preference number: 4 (lower is better)
Translates to: MYFQNQMLCRLAWQHGEAGFSGL*DVQVKP
Trigger: AGGCTTCACCTGAACATCGCATAATCCTGAGAACCC...GGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR GCA 90 bp TCCATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAATCAAAGGCCTTTAGATaGTTGAGCCGGGACCTTAGG +
Preference number: 4 (lower is better)
Translates to: SMYFQNQMLCRLAWQHGESKAFR*LSRDLR
Trigger: CCTAAGGTCCCGGCTCAAGCATCTAAAGGCCTTTGA...TTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CCA 90 bp CAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCCTGTCTCTAGGCTGCACTCTCTTGTaGTTTATTCAACTCCGCAAA +
Preference number: 4 (lower is better)
Translates to: QNQMLCRLAWQHGEALSLGCTLL*FIQLRK
Trigger: TTTGCGGAGTTGAATAAACCACAAGAGAGTGCAGCC...TAGAGACAGGGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CCA 90 bp CAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCCTGTCTCTATGGGGCTTTCAGAGCTaGAGACAAGGTTTGAAGTTT +
Preference number: 4 (lower is better)
Translates to: QNQMLCRLAWQHGEALSLWGFQS*RQGLKF
Trigger: AAACTTCAAACCTTGTCTCCAGCTCTGAAAGCCCCA...TAGAGACAGGGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CCA 90 bp TCCATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAACTCTCTGGTTTTCTCTaGGGCTTTCAGAGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: SMYFQNQMLCRLAWQHGELSGFL*GFQSWR
Trigger: TCTCCAGCTCTGAAAGCCCCAGAGAAAACCAGAGAG...TTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CCA 90 bp TCCATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAATTTCTGCGGATACGATaGGGAGTAGAGGTCGCTTCA +
Preference number: 4 (lower is better)
Translates to: SMYFQNQMLCRLAWQHGEFLRIR*GVEVAS
Trigger: TGAAGCGACCTCTACTCCCCATCGTATCCGCAGAAA...TTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CCA 90 bp ATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCCTTGAGACTCTTCTTTaGCACCTTCGTGAGGGTATG +
Preference number: 4 (lower is better)
Translates to: MYFQNQMLCRLAWQHGEALETLL*HLREGM
Trigger: CATACCCTCACGAAGGTGCCAAAGAAGAGTCTCAAG...GGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CCA 90 bp TCCATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAATGCACCCTCCGGTATaGTCAAGGAGTTTGCTTTCC +
Preference number: 4 (lower is better)
Translates to: SMYFQNQMLCRLAWQHGEMHPPV*SRSLLS
Trigger: GGAAAGCAAACTCCTTGACCATACCGGAGGGTGCAT...TTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CCA 90 bp CAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCCTGTCTCTATTGGCTGTTGCTTTTTaGCCTGTTAGCTTCTGCAAG +
Preference number: 4 (lower is better)
Translates to: QNQMLCRLAWQHGEALSLLAVAF*PVSFCK
Trigger: CTTGCAGAAGCTAACAGGCCAAAAAGCAACAGCCAA...TAGAGACAGGGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CCA 90 bp TCCATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCAGGTCCATTGTGTTaGCAATTGCCAGGACCACAA +
Preference number: 4 (lower is better)
Translates to: SMYFQNQMLCRLAWQHGEAGPLC*QLPGPQ
Trigger: TTGTGGTCCTGGCAATTGCCAACACAATGGACCTGC...TTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CCA 90 bp TCCATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAACATCATGATTCGCTCTaGCAGGTCCATTGTGTTGGC +
Preference number: 4 (lower is better)
Translates to: SMYFQNQMLCRLAWQHGEHHDSL*QVHCVG
Trigger: GCCAACACAATGGACCTGCCAGAGCGAATCATGATG...TTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR TCA 90 bp TCCATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGGGCCTGCCAACCCATaGATAAGTTTTTCTGGTCTT +
Preference number: 4 (lower is better)
Translates to: SMYFQNQMLCRLAWQHGEGPANP*ISFSGL
Trigger: AAGACCAGAAAAACTTATTCATGGGTTGGCAGGCCC...TTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACATGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR TCA 90 bp TCCATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAATGTCCAATCTGGATGTaGATCTCGGTGGAACAACCT +
Preference number: 4 (lower is better)
Translates to: SMYFQNQMLCRLAWQHGECPIWM*ISVEQP
Trigger: AGGTTGTTCCACCGAGATTCACATCCAGATTGGACA...TTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR TCA 90 bp TCCATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAATCTTTGGCACCTTCGTaGGGGTATGTAAGGATGACT +
Preference number: 4 (lower is better)
Translates to: SMYFQNQMLCRLAWQHGESLAPS*GYVRMT
Trigger: AGTCATCCTTACATACCCTCACGAAGGTGCCAAAGA...TTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR TCA 90 bp CAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCCTGTCTCTATCAGCTTCATGCCATTaGCCTCAATGTATTGAAAGG +
Preference number: 4 (lower is better)
Translates to: QNQMLCRLAWQHGEALSLSASCH*PQCIER
Trigger: CCTTTCAATACATTGAGGTCAATGGCATGAAGCTGA...TAGAGACAGGGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR TCA 90 bp ATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCATTATGTCTTGTTTGTaGGTCCACAGAAGGTCGAGC +
Preference number: 4 (lower is better)
Translates to: MYFQNQMLCRLAWQHGEAIMSCL*VHRRSS
Trigger: GCTCGACCTTCTGTGGACTCACAAACAAGACATAAT...GGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR GCA 90 bp ATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCGATTTGGAGGCGGAGTaGCTTGATTCAATCCTTTTG +
Preference number: 4 (lower is better)
Translates to: MYFQNQMLCRLAWQHGEADLEAE*LDSILL
Trigger: CAAAAGGATTGAATCAAGGCACTCCGCCTCCAAATC...GGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR GCA 90 bp CAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCCTGTCTCTATATGGTTTTCGAAGCTaGAATTCGGGTTCTCAGGAT +
Preference number: 4 (lower is better)
Translates to: QNQMLCRLAWQHGEALSLYGFRS*NSGSQD
Trigger: ATCCTGAGAACCCGAATTGCAGCTTCGAAAACCATA...TAGAGACAGGGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR GCA 90 bp ATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCAGAAACCGAAGCTGCTaGCTAATCCGATTCATAGTC +
Preference number: 4 (lower is better)
Translates to: MYFQNQMLCRLAWQHGEARNRSC*LIRFIV
Trigger: GACTATGAATCGGATTAGGCAGCAGCTTCGGTTTCT...GGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR GCA 90 bp ATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCCCTAGAAACCGAAGCTaGTGCCTAATCCGATTCATA +
Preference number: 4 (lower is better)
Translates to: MYFQNQMLCRLAWQHGEAPRNRS*CLIRFI
Trigger: TATGAATCGGATTAGGCAGCAGCTTCGGTTTCTAGG...GGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CCA 90 bp ATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCGAGGTCGCTTCATTCTaGGCTTTTGCTTCTTTTGCA +
Preference number: 4 (lower is better)
Translates to: MYFQNQMLCRLAWQHGEAEVASF*AFASFA
Trigger: TGCAAAAGAAGCAAAAGCCCAGAATGAAGCGACCTC...GGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CCA 90 bp ATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCTTGGCTGTTGCTTTTTaGCCTGTTAGCTTCTGCAAG +
Preference number: 4 (lower is better)
Translates to: MYFQNQMLCRLAWQHGEALAVAF*PVSFCK
Trigger: CTTGCAGAAGCTAACAGGCCAAAAAGCAACAGCCAA...GGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR GCA 90 bp CAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCCTGTCTCTATTCATTCTGGGCTTTTaGTTCTTTTGCATCCCTCTT +
Preference number: 4 (lower is better)
Translates to: QNQMLCRLAWQHGEALSLFILGF*FFCIPL
Trigger: AAGAGGGATGCAAAAGAAGCAAAAGCCCAGAATGAA...TAGAGACAGGGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR GCA 90 bp TCCATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAACCTAGAAACCGAAGCTaGTGCCTAATCCGATTCATA +
Preference number: 4 (lower is better)
Translates to: SMYFQNQMLCRLAWQHGEPRNRS*CLIRFI
Trigger: TATGAATCGGATTAGGCAGCAGCTTCGGTTTCTAGG...TTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR GCA 90 bp CAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCCTGTCTCTACTCCATTCTGCACAGTaGCACATGTTGACTATATAT +
Preference number: 4 (lower is better)
Translates to: QNQMLCRLAWQHGEALSLLHSAQ*HMLTIY
Trigger: ATATATAGTCAACATGTGGCACTGTGCAGAATGGAG...TAGAGACAGGGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CCA 90 bp TCCATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGGCTGCACTCTCTTGTaGTTTATTCAACTCCGCAAA +
Preference number: 4 (lower is better)
Translates to: SMYFQNQMLCRLAWQHGEGCTLL*FIQLRK
Trigger: TTTGCGGAGTTGAATAAACCACAAGAGAGTGCAGCC...TTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CCA 90 bp TCCATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAATTGATTCAATCCTTTTaGCCACATGTTCTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: SMYFQNQMLCRLAWQHGELIQSF*PHVLLG
Trigger: CCCCAGCAGAACATGTGGCCAAAAGGATTGAATCAA...TTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CCA 90 bp TCCATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAATGGGGCTTTCAGAGCTaGAGACAAGGTTTGAAGTTT +
Preference number: 4 (lower is better)
Translates to: SMYFQNQMLCRLAWQHGEWGFQS*RQGLKF
Trigger: AAACTTCAAACCTTGTCTCCAGCTCTGAAAGCCCCA...TTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CCA 90 bp TCCATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGAGGTCGCTTCATTCTaGGCTTTTGCTTCTTTTGCA +
Preference number: 4 (lower is better)
Translates to: SMYFQNQMLCRLAWQHGEEVASF*AFASFA
Trigger: TGCAAAAGAAGCAAAAGCCCAGAATGAAGCGACCTC...TTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR TCA 90 bp ATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCTTGACCTCAATGTATTaGAAGGGAGGAACATCATTG +
Preference number: 4 (lower is better)
Translates to: MYFQNQMLCRLAWQHGEALTSMY*KGGTSL
Trigger: CAATGATGTTCCTCCCTTTCAATACATTGAGGTCAA...GGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR TCA 90 bp TCCATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAATCAGCTTCATGCCATTaGCCTCAATGTATTGAAAGG +
Preference number: 4 (lower is better)
Translates to: SMYFQNQMLCRLAWQHGESASCH*PQCIER
Trigger: CCTTTCAATACATTGAGGTCAATGGCATGAAGCTGA...TTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR GCA 90 bp TCCATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAATATGGTTTTCGAAGCTaGAATTCGGGTTCTCAGGAT +
Preference number: 4 (lower is better)
Translates to: SMYFQNQMLCRLAWQHGEYGFRS*NSGSQD
Trigger: ATCCTGAGAACCCGAATTGCAGCTTCGAAAACCATA...TTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR GCA 90 bp ATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCTTCATTCTGGGCTTTTaGTTCTTTTGCATCCCTCTT +
Preference number: 4 (lower is better)
Translates to: MYFQNQMLCRLAWQHGEAFILGF*FFCIPL
Trigger: AAGAGGGATGCAAAAGAAGCAAAAGCCCAGAATGAA...GGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR GCA 90 bp ATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCCTCCATTCTGCACAGTaGCACATGTTGACTATATAT +
Preference number: 4 (lower is better)
Translates to: MYFQNQMLCRLAWQHGEALHSAQ*HMLTIY
Trigger: ATATATAGTCAACATGTGGCACTGTGCAGAATGGAG...GGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CCA 90 bp ATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCATGAATAAGTTTTTCTaGTCTTCAGCCTTGTGGGGT +
Preference number: 4 (lower is better)
Translates to: MYFQNQMLCRLAWQHGEAMNKFF*SSALWG
Trigger: ACCCCACAAGGCTGAAGACCAGAAAAACTTATTCAT...GGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS GCA 90 bp ACCGCCTCCACTTCGAGAGCTCCGGGGGATGCGGCACCTCTAACCTaGACCAGCAGGGCTCCTTCTACAACTACGGGCCGAAAGCCAGGA +
Preference number: 5 (lower is better)
Translates to: TASTSRAPGDAAPLT*TSRAPSTTTGRKPG
Trigger: TCCTGGCTTTCGGCCCGTAGTTGTAGAAGGAGCCCTGCTGGTGCAGGTTAGAGGTGCCGCATCCCCCGGAGCTCTCGAAGTGGAGGCGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS CCA 90 bp AGCAGAAACATGCAGCCTCAGTCGGGCTTCCTCCAGCACACTGGCTaGCTCCTGGGCAGCCAGGCTTCGACTACGGATCTGAGGAGCGGC +
Preference number: 5 (lower is better)
Translates to: SRNMQPQSGFLQHTG*LLGSQASTTDLRSG
Trigger: GCCGCTCCTCAGATCCGTAGTCGAAGCCTGGCTGCCCAGGAGCCAGCCAGTGTGCTGGAGGAAGCCCGACTGAGGCTGCATGTTTCTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS TCA 90 bp CAGGAGGCGACAGGAGCCCAGGTGAGAACACACGGCCATGGTCTCTaGCATGGTGGGGTACGGCAGTCCCTCCATTCTGCACAGTGCCAC +
Preference number: 5 (lower is better)
Translates to: QEATGAQVRTHGHGL*HGGVRQSLHSAQCH
Trigger: GTGGCACTGTGCAGAATGGAGGGACTGCCGTACCCCACCATGTCAGAGACCATGGCCGTGTGTTCTCACCTGGGCTCCTGTCGCCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS GCA 90 bp AAGCCCTCCGTTTCCTACCGCCTCCACTTCGAGAGCTCCGGGGGATaGGGCACCTCTAACCTGCACCAGCAGGGCTCCTTCTACAACTAC +
Preference number: 5 (lower is better)
Translates to: KPSVSYRLHFESSGG*GTSNLHQQGSFYNY
Trigger: GTAGTTGTAGAAGGAGCCCTGCTGGTGCAGGTTAGAGGTGCCGCATCCCCCGGAGCTCTCGAAGTGGAGGCGGTAGGAAACGGAGGGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS TCA 90 bp AGCACACTGGCTGGCTCCTGGGCAGCCAGGCTTCGACTACGGATCTaGGGAGCGGCACAACGTGGCGTTCTAGGCTTGAGACTCTTCTTT +
Preference number: 5 (lower is better)
Translates to: STLAGSWAARLRLRI*GAAQRGVLGLRLFF
Trigger: AAAGAAGAGTCTCAAGCCTAGAACGCCACGTTGTGCCGCTCCTCAGATCCGTAGTCGAAGCCTGGCTGCCCAGGAGCCAGCCAGTGTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS CCA 90 bp TGGCTTGGGCTGCCTGCTGCAGGCAGCGTATCACTTCATGAACAGTaGCAGTCTTCCCTGTCCCAGGGACACCGGAGATGTACATGCACC +
Preference number: 5 (lower is better)
Translates to: WLGLPAAGSVSLHEQ*QSSLSQGHRRCTCT
Trigger: GGTGCATGTACATCTCCGGTGTCCCTGGGACAGGGAAGACTGCCACTGTTCATGAAGTGATACGCTGCCTGCAGCAGGCAGCCCAAGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS TCA 90 bp CAGAAGGTCGAGCTCATCCACAAGCAGGACGGTGGTTTCCTGAGGTaGCCCTCGGGTGCAGAATTGCTTTGCCAGCAGTTCTGCCGCATG +
Preference number: 5 (lower is better)
Translates to: QKVELIHKQDGGFLR*PSGAELLCQQFCRM
Trigger: CATGCGGCAGAACTGCTGGCAAAGCAATTCTGCACCCGAGGGTCACCTCAGGAAACCACCGTCCTGCTTGTGGATGAGCTCGACCTTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS TCA 90 bp GTCCACAGAAGGTCGAGCTCATCCACAAGCAGGACGGTGGTTTCCTaGGGTGACCCTCGGGTGCAGAATTGCTTTGCCAGCAGTTCTGCC +
Preference number: 5 (lower is better)
Translates to: VHRRSSSSTSRTVVS*GDPRVQNCFASSSA
Trigger: GGCAGAACTGCTGGCAAAGCAATTCTGCACCCGAGGGTCACCTCAGGAAACCACCGTCCTGCTTGTGGATGAGCTCGACCTTCTGTGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS GCA 90 bp GCTCATCCACAAGCAGGACGGTGGTTTCCTGAGGTGACCCTCGGGTaGAGAATTGCTTTGCCAGCAGTTCTGCCGCATGGTTGGCTGTTG +
Preference number: 5 (lower is better)
Translates to: AHPQAGRWFPEVTLG*RIALPAVLPHGWLL
Trigger: CAACAGCCAACCATGCGGCAGAACTGCTGGCAAAGCAATTCTGCACCCGAGGGTCACCTCAGGAAACCACCGTCCTGCTTGTGGATGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS TCA 90 bp ACATCATTGGCTTGGGCTGCCTGCTGCAGGCAGCGTATCACTTCATaGACAGTGGCAGTCTTCCCTGTCCCAGGGACACCGGAGATGTAC +
Preference number: 5 (lower is better)
Translates to: TSLAWAACCRQRITS*TVAVFPVPGTPEMY
Trigger: GTACATCTCCGGTGTCCCTGGGACAGGGAAGACTGCCACTGTTCATGAAGTGATACGCTGCCTGCAGCAGGCAGCCCAAGCCAATGATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS CCA 90 bp GTGAAGCCCCTTTACTCGTCTTTCAGCGCATACAGCACATCATCCTaGCTGACGTTGAGCCGCACCCGAAGGAGCAGATCGTTCCTGCTG +
Preference number: 5 (lower is better)
Translates to: VKPLYSSFSAYSTSS*LTLSRTRRSRSFLL
Trigger: CAGCAGGAACGATCTGCTCCTTCGGGTGCGGCTCAACGTCAGCCAGGATGATGTGCTGTATGCGCTGAAAGACGAGTAAAGGGGCTTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS GCA 90 bp CCGGTTCATCATGATTCGCTCTGGCAGGTCCATTGTGTTGGCAATTaGCAGGACCACAAGCCGGGCCTCCTTATGAGTGGGCCAGTCAAA +
Preference number: 5 (lower is better)
Translates to: PVHHDSLWQVHCVGN*QDHKPGLLMSGPVK
Trigger: TTTGACTGGCCCACTCATAAGGAGGCCCGGCTTGTGGTCCTGGCAATTGCCAACACAATGGACCTGCCAGAGCGAATCATGATGAACCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS CCA 90 bp AGGGCCTGCCAACCCATGAATAAGTTTTTCTGGTCTTCAGCCTTGTaGGGTAGTGTGCCATGGCTTCCGGCTCCAAAGCTTCCTCCGGCT +
Preference number: 5 (lower is better)
Translates to: RACQPMNKFFWSSAL*GSVPWLPAPKLPPA
Trigger: AGCCGGAGGAAGCTTTGGAGCCGGAAGCCATGGCACACTACCCCACAAGGCTGAAGACCAGAAAAACTTATTCATGGGTTGGCAGGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371568.8
CDS TCA 90 bp ACTTGGTGGGGCTCCGTCAGCTTCATGCCATTGACCTCAATGTATTaGAAGGGAGGAACATCATTGGCTTGGGCTGCCTGCTGCAGGCAG +
Preference number: 5 (lower is better)
Translates to: TWWGSVSFMPLTSMY*KGGTSLAWAACCRQ
Trigger: CTGCCTGCAGCAGGCAGCCCAAGCCAATGATGTTCCTCCCTTTCAATACATTGAGGTCAATGGCATGAAGCTGACGGAGCCCCACCAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS CCA 90 bp CATGTTCTGCTGGGGTCCAAGAAGGGCTCTCTGCACTCTTACTCTTaGCTCTCACGGGTTTCTGGCACTTGGCTGCACTCTCTTGTGGTT +
Preference number: 5 (lower is better)
Translates to: HVLLGSKKGSLHSYS*LSRVSGTWLHSLVV
Trigger: AACCACAAGAGAGTGCAGCCAAGTGCCAGAAACCCGTGAGAGCCAAGAGTAAGAGTGCAGAGAGCCCTTCTTGGACCCCAGCAGAACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS CCA 90 bp GTAAGGATGACTTCAAGGAAGATCGCAGGTTCCTGGACACAGTTCTaGGTGCTCTCCTTGGAAGGGGCGGTGTGGAAGCCTCTTCTTCGT +
Preference number: 5 (lower is better)
Translates to: VRMTSRKIAGSWTQF*VLSLEGAVWKPLLR
Trigger: ACGAAGAAGAGGCTTCCACACCGCCCCTTCCAAGGAGAGCACCCAGAACTGTGTCCAGGAACCTGCGATCTTCCTTGAAGTCATCCTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS CCA 90 bp GAGTTTGGCGAGATTTGGAGGCGGAGTGCCTTGATTCAATCCTTTTaGCCACATGTTCTGCTGGGGTCCAAGAAGGGCTCTCTGCACTCT +
Preference number: 5 (lower is better)
Translates to: EFGEIWRRSALIQSF*PHVLLGSKKGSLHS
Trigger: AGAGTGCAGAGAGCCCTTCTTGGACCCCAGCAGAACATGTGGCCAAAAGGATTGAATCAAGGCACTCCGCCTCCAAATCTCGCCAAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS CCA 90 bp TCCAGCCTCTTTCTGGCTCTTGGGGTAAGAGGATGGGTAGGAGTTTaGCGAGATTTGGAGGCGGAGTGCCTTGATTCAATCCTTTTGGCC +
Preference number: 5 (lower is better)
Translates to: SSLFLALGVRGWVGV*RDLEAECLDSILLA
Trigger: GGCCAAAAGGATTGAATCAAGGCACTCCGCCTCCAAATCTCGCCAAACTCCTACCCATCCTCTTACCCCAAGAGCCAGAAAGAGGCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS CCA 90 bp AAGTTGCCAAGCTCCAGCCTCTTTCTGGCTCTTGGGGTAAGAGGATaGGTAGGAGTTTGGCGAGATTTGGAGGCGGAGTGCCTTGATTCA +
Preference number: 5 (lower is better)
Translates to: KLPSSSLFLALGVRG*VGVWRDLEAECLDS
Trigger: TGAATCAAGGCACTCCGCCTCCAAATCTCGCCAAACTCCTACCCATCCTCTTACCCCAAGAGCCAGAAAGAGGCTGGAGCTTGGCAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS TCA 90 bp AAGAGGATGGGTAGGAGTTTGGCGAGATTTGGAGGCGGAGTGCCTTaGTTCAATCCTTTTGGCCACATGTTCTGCTGGGGTCCAAGAAGG +
Preference number: 5 (lower is better)
Translates to: KRMGRSLARFGGGVP*FNPFGHMFCWGPRR
Trigger: CCTTCTTGGACCCCAGCAGAACATGTGGCCAAAAGGATTGAATCAAGGCACTCCGCCTCCAAATCTCGCCAAACTCCTACCCATCCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS GCA 90 bp AATGTTGCTGTCACAGGCCGGGTAATCATACCAGAATATTTCCTGTaGACCAGGCTTCCGGCCCAACAAATGCCGTTTACAGGCAGGGAC +
Preference number: 5 (lower is better)
Translates to: NVAVTGRVIIPEYFL*TRLPAQQMPFTGRD
Trigger: GTCCCTGCCTGTAAACGGCATTTGTTGGGCCGGAAGCCTGGTGCACAGGAAATATTCTGGTATGATTACCCGGCCTGTGACAGCAACATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CAA 90 bp CAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCCTGTCTCTATCATCCTGGCTGACGTaGAGCCGCACCCGAAGGAGC +
Preference number: 5 (lower is better)
Translates to: QNQMLCRLAWQHGEALSLSSWLT*SRTRRS
Trigger: GCTCCTTCGGGTGCGGCTCAACGTCAGCCAGGATGA...TAGAGACAGGGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS CCA 90 bp ACCCTCGGGTGCAGAATTGCTTTGCCAGCAGTTCTGCCGCATGGTTaGCTGTTGCTTTTTGGCCTGTTAGCTTCTGCAAGATTTGCACAT +
Preference number: 5 (lower is better)
Translates to: TLGCRIALPAVLPHG*LLLFGLLASARFAH
Trigger: ATGTGCAAATCTTGCAGAAGCTAACAGGCCAAAAAGCAACAGCCAACCATGCGGCAGAACTGCTGGCAAAGCAATTCTGCACCCGAGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CAA 90 bp ATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCTCATCCTGGCTGACGTaGAGCCGCACCCGAAGGAGC +
Preference number: 5 (lower is better)
Translates to: MYFQNQMLCRLAWQHGEASSWLT*SRTRRS
Trigger: GCTCCTTCGGGTGCGGCTCAACGTCAGCCAGGATGA...GGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS TCA 90 bp CACATGTTGACTATATATCTGTTGAAACGTGGCTTCCTCCAGTCCTaGTCGACGGAACTCTGCGAGGATGGCTCTCAGGAAGCTCTGTTC +
Preference number: 5 (lower is better)
Translates to: HMLTIYLLKRGFLQS*STELCEDGSQEALF
Trigger: GAACAGAGCTTCCTGAGAGCCATCCTCGCAGAGTTCCGTCGATCAGGACTGGAGGAAGCCACGTTTCAACAGATATATAGTCAACATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS GCA 90 bp TCATACCAGAATATTTCCTGTGCACCAGGCTTCCGGCCCAACAAATaGCGTTTACAGGCAGGGACTTCACAGAATCGGACAAACCACTGT +
Preference number: 5 (lower is better)
Translates to: SYQNISCAPGFRPNK*RLQAGTSQNRTNHC
Trigger: ACAGTGGTTTGTCCGATTCTGTGAAGTCCCTGCCTGTAAACGGCATTTGTTGGGCCGGAAGCCTGGTGCACAGGAAATATTCTGGTATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS CCA 90 bp CAAGAAGGGCTCTCTGCACTCTTACTCTTGGCTCTCACGGGTTTCTaGCACTTGGCTGCACTCTCTTGTGGTTTATTCAACTCCGCAAAT +
Preference number: 5 (lower is better)
Translates to: QEGLSALLLLALTGF*HLAALSCGLFNSAN
Trigger: ATTTGCGGAGTTGAATAAACCACAAGAGAGTGCAGCCAAGTGCCAGAAACCCGTGAGAGCCAAGAGTAAGAGTGCAGAGAGCCCTTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CAA 90 bp CAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCCTGTCTCTACCCTCGGGTGCAGAATaGCTTTGCCAGCAGTTCTGC +
Preference number: 5 (lower is better)
Translates to: QNQMLCRLAWQHGEALSLPSGAE*LCQQFC
Trigger: GCAGAACTGCTGGCAAAGCAATTCTGCACCCGAGGG...TAGAGACAGGGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS TCA 90 bp AGATTTGCACATAGACTTGGTGGGGCTCCGTCAGCTTCATGCCATTaGCCTCAATGTATTGAAAGGGAGGAACATCATTGGCTTGGGCTG +
Preference number: 5 (lower is better)
Translates to: RFAHRLGGAPSASCH*PQCIEREEHHWLGL
Trigger: CAGCCCAAGCCAATGATGTTCCTCCCTTTCAATACATTGAGGTCAATGGCATGAAGCTGACGGAGCCCCACCAAGTCTATGTGCAAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS GCA 90 bp GGACACCGGAGATGTACATGCACCCTCCGGTATGGTCAAGGAGTTTaGTTTCCACAAAATTGTAGATGTCTTGGAATTCCTGTTCCCGAC +
Preference number: 5 (lower is better)
Translates to: GHRRCTCTLRYGQGV*FPQNCRCLGIPVPD
Trigger: GTCGGGAACAGGAATTCCAAGACATCTACAATTTTGTGGAAAGCAAACTCCTTGACCATACCGGAGGGTGCATGTACATCTCCGGTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS GCA 90 bp ATTGACCTCAATGTATTGAAAGGGAGGAACATCATTGGCTTGGGCTaGCTGCTGCAGGCAGCGTATCACTTCATGAACAGTGGCAGTCTT +
Preference number: 5 (lower is better)
Translates to: IDLNVLKGRNIIGLG*LLQAAYHFMNSGSL
Trigger: AAGACTGCCACTGTTCATGAAGTGATACGCTGCCTGCAGCAGGCAGCCCAAGCCAATGATGTTCCTCCCTTTCAATACATTGAGGTCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CAA 90 bp CAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCCTGTCTCTAAGGATGGGTAGGAGTTaGGCGAGATTTGGAGGCGGA +
Preference number: 5 (lower is better)
Translates to: QNQMLCRLAWQHGEALSLRMGRS*ARFGGG
Trigger: TCCGCCTCCAAATCTCGCCAAACTCCTACCCATCCT...TAGAGACAGGGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CAA 90 bp CAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCCTGTCTCTACGTGGCGTTCTAGGCTaGAGACTCTTCTTTGGCACC +
Preference number: 5 (lower is better)
Translates to: QNQMLCRLAWQHGEALSLRGVLG*RLFFGT
Trigger: GGTGCCAAAGAAGAGTCTCAAGCCTAGAACGCCACG...TAGAGACAGGGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CAA 90 bp CAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCCTGTCTCTAGGGTGCAGAATTGCTTaGCCAGCAGTTCTGCCGCAT +
Preference number: 5 (lower is better)
Translates to: QNQMLCRLAWQHGEALSLGCRIA*PAVLPH
Trigger: ATGCGGCAGAACTGCTGGCAAAGCAATTCTGCACCC...TAGAGACAGGGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CAA 90 bp ATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCCCCTCGGGTGCAGAATaGCTTTGCCAGCAGTTCTGC +
Preference number: 5 (lower is better)
Translates to: MYFQNQMLCRLAWQHGEAPSGAE*LCQQFC
Trigger: GCAGAACTGCTGGCAAAGCAATTCTGCACCCGAGGG...GGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CAA 90 bp ATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCTTCTGGTCTTCAGCCTaGTGGGGTAGTGTGCCATGG +
Preference number: 5 (lower is better)
Translates to: MYFQNQMLCRLAWQHGEAFWSSA*WGSVPW
Trigger: CCATGGCACACTACCCCACAAGGCTGAAGACCAGAA...GGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CAA 90 bp ATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCACGGGTTTCTGGCACTaGGCTGCACTCTCTTGTGGT +
Preference number: 5 (lower is better)
Translates to: MYFQNQMLCRLAWQHGEATGFWH*AALSCG
Trigger: ACCACAAGAGAGTGCAGCCAAGTGCCAGAAACCCGT...GGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CAA 90 bp CAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCCTGTCTCTATCTGCACTCTTACTCTaGGCTCTCACGGGTTTCTGG +
Preference number: 5 (lower is better)
Translates to: QNQMLCRLAWQHGEALSLSALLL*ALTGFW
Trigger: CCAGAAACCCGTGAGAGCCAAGAGTAAGAGTGCAGA...TAGAGACAGGGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CAA 90 bp ATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCGGAGTTTGGCGAGATTaGGAGGCGGAGTGCCTTGAT +
Preference number: 5 (lower is better)
Translates to: MYFQNQMLCRLAWQHGEAGVWRD*EAECLD
Trigger: ATCAAGGCACTCCGCCTCCAAATCTCGCCAAACTCC...GGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CAA 90 bp TCCATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAAGGAACATCATTGGCTaGGGCTGCCTGCTGCAGGCA +
Preference number: 5 (lower is better)
Translates to: SMYFQNQMLCRLAWQHGERNIIG*GCLLQA
Trigger: TGCCTGCAGCAGGCAGCCCAAGCCAATGATGTTCCT...TTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CAA 90 bp TCCATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAAAGGGAGGAACATCATaGGCTTGGGCTGCCTGCTGC +
Preference number: 5 (lower is better)
Translates to: SMYFQNQMLCRLAWQHGEKGGTS*AWAACC
Trigger: GCAGCAGGCAGCCCAAGCCAATGATGTTCCTCCCTT...TTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CAA 90 bp CAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCCTGTCTCTACCGCATGGTTGGCTGTaGCTTTTTGGCCTGTTAGCT +
Preference number: 5 (lower is better)
Translates to: QNQMLCRLAWQHGEALSLPHGWL*LFGLLA
Trigger: AGCTAACAGGCCAAAAAGCAACAGCCAACCATGCGG...TAGAGACAGGGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CAA 90 bp TCCATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAACCATTGTGTTGGCAATaGCCAGGACCACAAGCCGGG +
Preference number: 5 (lower is better)
Translates to: SMYFQNQMLCRLAWQHGEPLCWQ*PGPQAG
Trigger: CCCGGCTTGTGGTCCTGGCAATTGCCAACACAATGG...TTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CAA 90 bp ATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCGCTCTGGCAGGTCCATaGTGTTGGCAATTGCCAGGA +
Preference number: 5 (lower is better)
Translates to: MYFQNQMLCRLAWQHGEAALAGP*CWQLPG
Trigger: TCCTGGCAATTGCCAACACAATGGACCTGCCAGAGC...GGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CAA 90 bp CAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCCTGTCTCTAAAGGCCTTTAGATGCTaGAGCCGGGACCTTAGGATC +
Preference number: 5 (lower is better)
Translates to: QNQMLCRLAWQHGEALSLKAFRC*SRDLRI
Trigger: GATCCTAAGGTCCCGGCTCAAGCATCTAAAGGCCTT...TAGAGACAGGGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS CCA 90 bp GTGAAGCCTTCTTGTCATCCTCAGTATAAGAGAGTCCAGTCTCTCTaGTTTTCTCTGGGGCTTTCAGAGCTGGAGACAAGGTTTGAAGTT +
Preference number: 5 (lower is better)
Translates to: VKPSCHPQYKRVQSL*FSLGLSELETRFEV
Trigger: AACTTCAAACCTTGTCTCCAGCTCTGAAAGCCCCAGAGAAAACCAGAGAGACTGGACTCTCTTATACTGAGGATGACAAGAAGGCTTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CAA 90 bp TCCATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAATTCTGGTCTTCAGCCTaGTGGGGTAGTGTGCCATGG +
Preference number: 5 (lower is better)
Translates to: SMYFQNQMLCRLAWQHGEFWSSA*WGSVPW
Trigger: CCATGGCACACTACCCCACAAGGCTGAAGACCAGAA...TTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CAA 90 bp CAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCCTGTCTCTACTTGGCTGCACTCTCTaGTGGTTTATTCAACTCCGC +
Preference number: 5 (lower is better)
Translates to: QNQMLCRLAWQHGEALSLLGCTL*WFIQLR
Trigger: GCGGAGTTGAATAAACCACAAGAGAGTGCAGCCAAG...TAGAGACAGGGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CAA 90 bp ATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCTGGAGGCGGAGTGCCTaGATTCAATCCTTTTGGCCA +
Preference number: 5 (lower is better)
Translates to: MYFQNQMLCRLAWQHGEAWRRSA*IQSFWP
Trigger: TGGCCAAAAGGATTGAATCAAGGCACTCCGCCTCCA...GGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CAA 90 bp TCCATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAACGTGGCGTTCTAGGCTaGAGACTCTTCTTTGGCACC +
Preference number: 5 (lower is better)
Translates to: SMYFQNQMLCRLAWQHGERGVLG*RLFFGT
Trigger: GGTGCCAAAGAAGAGTCTCAAGCCTAGAACGCCACG...TTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CAA 90 bp ATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCGATTTGCACATAGACTaGGTGGGGCTCCGTCAGCTT +
Preference number: 5 (lower is better)
Translates to: MYFQNQMLCRLAWQHGEADLHID*VGLRQL
Trigger: AAGCTGACGGAGCCCCACCAAGTCTATGTGCAAATC...GGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CAA 90 bp TCCATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGGGTGCAGAATTGCTTaGCCAGCAGTTCTGCCGCAT +
Preference number: 5 (lower is better)
Translates to: SMYFQNQMLCRLAWQHGEGCRIA*PAVLPH
Trigger: ATGCGGCAGAACTGCTGGCAAAGCAATTCTGCACCC...TTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CAA 90 bp TCCATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCTCTGGCAGGTCCATaGTGTTGGCAATTGCCAGGA +
Preference number: 5 (lower is better)
Translates to: SMYFQNQMLCRLAWQHGEALAGP*CWQLPG
Trigger: TCCTGGCAATTGCCAACACAATGGACCTGCCAGAGC...TTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS TCA 90 bp TGGAGACAAGGTTTGAAGTTTATCAGGCTGAGATCTCTTAGAAGGTaGGGTGATCTCCGAGAAGGCCACTTTCCGTTTTATTCTTCCTGG +
Preference number: 5 (lower is better)
Translates to: WRQGLKFIRLRSLRR*GDLREGHFPFYSSW
Trigger: CCAGGAAGAATAAAACGGAAAGTGGCCTTCTCGGAGATCACCTCACCTTCTAAGAGATCTCAGCCTGATAAACTTCAAACCTTGTCTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS TCA 90 bp TTTCGAAGCTGCAATTCGGGTTCTCAGGATTATGCGATGTTCAGGTaGAGCCTTCTTGTCATCCTCAGTATAAGAGAGTCCAGTCTCTCT +
Preference number: 5 (lower is better)
Translates to: FRSCNSGSQDYAMFR*SLLVILSIRESSLS
Trigger: AGAGAGACTGGACTCTCTTATACTGAGGATGACAAGAAGGCTTCACCTGAACATCGCATAATCCTGAGAACCCGAATTGCAGCTTCGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS CCA 90 bp CTAATCCGATTCATAGTCAAGACAGAACTCTTTCTGCGGATACGATaGGGAGTAGAGGTCGCTTCATTCTGGGCTTTTGCTTCTTTTGCA +
Preference number: 5 (lower is better)
Translates to: LIRFIVKTELFLRIR*GVEVASFWAFASFA
Trigger: TGCAAAAGAAGCAAAAGCCCAGAATGAAGCGACCTCTACTCCCCATCGTATCCGCAGAAAGAGTTCTGTCTTGACTATGAATCGGATTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CAA 90 bp TCCATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAATCGGTACCACATCCTTaGGGGCTAAAGGTATCACCC +
Preference number: 5 (lower is better)
Translates to: SMYFQNQMLCRLAWQHGESVPHP*GLKVSP
Trigger: GGGTGATACCTTTAGCCCCAAAGGATGTGGTACCGA...TTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CAA 90 bp CAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCCTGTCTCTACTTGATTCAATCCTTTaGGCCACATGTTCTGCTGGG +
Preference number: 5 (lower is better)
Translates to: QNQMLCRLAWQHGEALSLLDSIL*ATCSAG
Trigger: CCCAGCAGAACATGTGGCCAAAAGGATTGAATCAAG...TAGAGACAGGGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CAA 90 bp TCCATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAATGGAGGCGGAGTGCCTaGATTCAATCCTTTTGGCCA +
Preference number: 5 (lower is better)
Translates to: SMYFQNQMLCRLAWQHGEWRRSA*IQSFWP
Trigger: TGGCCAAAAGGATTGAATCAAGGCACTCCGCCTCCA...TTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CAA 90 bp TCCATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGATTTGCACATAGACTaGGTGGGGCTCCGTCAGCTT +
Preference number: 5 (lower is better)
Translates to: SMYFQNQMLCRLAWQHGEDLHID*VGLRQL
Trigger: AAGCTGACGGAGCCCCACCAAGTCTATGTGCAAATC...TTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CAA 90 bp TCCATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAACCGCATGGTTGGCTGTaGCTTTTTGGCCTGTTAGCT +
Preference number: 5 (lower is better)
Translates to: SMYFQNQMLCRLAWQHGEPHGWL*LFGLLA
Trigger: AGCTAACAGGCCAAAAAGCAACAGCCAACCATGCGG...TTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACATGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CAA 90 bp TCCATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAAGTTCTGCCGCATGGTaGGCTGTTGCTTTTTGGCCT +
Preference number: 5 (lower is better)
Translates to: SMYFQNQMLCRLAWQHGESSAAW*AVAFWP
Trigger: AGGCCAAAAAGCAACAGCCAACCATGCGGCAGAACT...TTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACATGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CAA 90 bp TCCATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAAAGGCCTTTAGATGCTaGAGCCGGGACCTTAGGATC +
Preference number: 5 (lower is better)
Translates to: SMYFQNQMLCRLAWQHGEKAFRC*SRDLRI
Trigger: GATCCTAAGGTCCCGGCTCAAGCATCTAAAGGCCTT...TTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CAA 90 bp CAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCCTGTCTCTACTTCATTCTGGGCTTTaGCTTCTTTTGCATCCCTCT +
Preference number: 5 (lower is better)
Translates to: QNQMLCRLAWQHGEALSLLHSGL*LLLHPS
Trigger: AGAGGGATGCAAAAGAAGCAAAAGCCCAGAATGAAG...TAGAGACAGGGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CAA 90 bp TCCATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAACTTGATTCAATCCTTTaGGCCACATGTTCTGCTGGG +
Preference number: 5 (lower is better)
Translates to: SMYFQNQMLCRLAWQHGELDSIL*ATCSAG
Trigger: CCCAGCAGAACATGTGGCCAAAAGGATTGAATCAAG...TTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CAA 90 bp ATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCCTTCATTCTGGGCTTTaGCTTCTTTTGCATCCCTCT +
Preference number: 5 (lower is better)
Translates to: MYFQNQMLCRLAWQHGEALHSGL*LLLHPS
Trigger: AGAGGGATGCAAAAGAAGCAAAAGCCCAGAATGAAG...GGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CAA 90 bp CAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCCTGTCTCTATTGACTATATATCTGTaGAAACGTGGCTTCCTCCAG +
Preference number: 5 (lower is better)
Translates to: QNQMLCRLAWQHGEALSLLTIYL*KRGFLQ
Trigger: CTGGAGGAAGCCACGTTTCAACAGATATATAGTCAA...TAGAGACAGGGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CAA 90 bp CAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCCTGTCTCTAAAAATTGTAGATGTCTaGGAATTCCTGTTCCCGACA +
Preference number: 5 (lower is better)
Translates to: QNQMLCRLAWQHGEALSLKIVDV*EFLFPT
Trigger: TGTCGGGAACAGGAATTCCAAGACATCTACAATTTT...TAGAGACAGGGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CAA 90 bp CAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCCTGTCTCTAAGAACAGAGGAATTTTaGATGGCCGTGATGTATGAT +
Preference number: 5 (lower is better)
Translates to: QNQMLCRLAWQHGEALSLRTEEF*MAVMYD
Trigger: ATCATACATCACGGCCATCAAAAATTCCTCTGTTCT...TAGAGACAGGGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS TCA 90 bp TCATCATCATCCCCTTCAATCAACACAAACTGTCCAATCTGGATGTaGATCTCGGTGGAACAACCTTCTGTTTTCACACACATTTCTCTA +
Preference number: 5 (lower is better)
Translates to: SSSSPSINTNCPIWM*ISVEQPSVFTHISL
Trigger: TAGAGAAATGTGTGTGAAAACAGAAGGTTGTTCCACCGAGATTCACATCCAGATTGGACAGTTTGTGTTGATTGAAGGGGATGATGATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CAA 90 bp ATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCCATTTCTCTATAGGTTaGGTAGTGCAGTTTTCGATC +
Preference number: 5 (lower is better)
Translates to: MYFQNQMLCRLAWQHGEAHFSIG*VVQFSI
Trigger: GATCGAAAACTGCACTACCAAACCTATAGAGAAATG...GGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CAA 90 bp CAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCCTGTCTCTATTTGCATCCCTCTTTTaGATGTTTTCTGGTTTCAGA +
Preference number: 5 (lower is better)
Translates to: QNQMLCRLAWQHGEALSLFASLF*MFSGFR
Trigger: TCTGAAACCAGAAAACATCAAAAAGAGGGATGCAAA...TAGAGACAGGGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CAA 90 bp CAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCCTGTCTCTAATTGACCTCAATGTATaGAAAGGGAGGAACATCATT +
Preference number: 5 (lower is better)
Translates to: QNQMLCRLAWQHGEALSLIDLNV*KGRNII
Trigger: AATGATGTTCCTCCCTTTCAATACATTGAGGTCAAT...TAGAGACAGGGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CAA 90 bp ATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCAGAACAGAGGAATTTTaGATGGCCGTGATGTATGAT +
Preference number: 5 (lower is better)
Translates to: MYFQNQMLCRLAWQHGEARTEEF*MAVMYD
Trigger: ATCATACATCACGGCCATCAAAAATTCCTCTGTTCT...GGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CAA 90 bp TCCATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAATTGACTATATATCTGTaGAAACGTGGCTTCCTCCAG +
Preference number: 5 (lower is better)
Translates to: SMYFQNQMLCRLAWQHGELTIYL*KRGFLQ
Trigger: CTGGAGGAAGCCACGTTTCAACAGATATATAGTCAA...TTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CAA 90 bp ATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCCGCACAGTGCCACATGTaGACTATATATCTGTTGAAA +
Preference number: 5 (lower is better)
Translates to: MYFQNQMLCRLAWQHGEAAQCHM*TIYLLK
Trigger: TTTCAACAGATATATAGTCAACATGTGGCACTGTGC...GGCTTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS TCA 90 bp CTTGTGGTTTATTCAACTCCGCAAATAGTTCTGAGGAAAGTGGCCTaGATTTCTTCTCATTCCAGGATAGTTTCACAAAGAGTGTCTTCT +
Preference number: 5 (lower is better)
Translates to: LVVYSTPQIVLRKVA*ISSHSRIVSQRVSS
Trigger: AGAAGACACTCTTTGTGAAACTATCCTGGAATGAGAAGAAATTCAGGCCACTTTCCTCAGAACTATTTGCGGAGTTGAATAAACCACAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS-3UTR CAA 90 bp TCCATGTACTTCCAAAATCAGATGCTTTGTAGACTAGCTTGGCAACATGGTGAAGCACAGTGCCACATGTaGACTATATATCTGTTGAAA +
Preference number: 5 (lower is better)
Translates to: SMYFQNQMLCRLAWQHGEAQCHM*TIYLLK
Trigger: TTTCAACAGATATATAGTCAACATGTGGCACTGTGC...TTCACCATGTTGCCAAGCTAGTCTACAAAGCATCTGATTTTGGAAGTACATGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS TCA 72 bp GCTGGCTCCTGGGCAGCCAGGCTTCGACTACGGATCTaGGGAGCGGCACAACGTGGCGTTCTAGGCTTGAGA +
Preference number: 6 (lower is better)
Translates to: AGSWAARLRLRI*GAAQRGVLGLR
Trigger: TCTCAAGCCTAGAACGCCACGTTGTGCCGCTCCTCAGATCCGTAGTCGAAGCCTGGCTGCCCAGGAGCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS GCA 72 bp ACTTCGAGAGCTCCGGGGGATGCGGCACCTCTAACCTaGACCAGCAGGGCTCCTTCTACAACTACGGGCCGA +
Preference number: 6 (lower is better)
Translates to: TSRAPGDAAPLT*TSRAPSTTTGR
Trigger: TCGGCCCGTAGTTGTAGAAGGAGCCCTGCTGGTGCAGGTTAGAGGTGCCGCATCCCCCGGAGCTCTCGAAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS TCA 72 bp GCTTGGGCTGCCTGCTGCAGGCAGCGTATCACTTCATaGACAGTGGCAGTCTTCCCTGTCCCAGGGACACCG +
Preference number: 6 (lower is better)
Translates to: AWAACCRQRITS*TVAVFPVPGTP
Trigger: CGGTGTCCCTGGGACAGGGAAGACTGCCACTGTTCATGAAGTGATACGCTGCCTGCAGCAGGCAGCCCAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS GCA 72 bp CTCTGTGGCACGCCTGCAGATGTCCAGGCACCGTCGTaGATCTCCAGACAGTGCTGCTACCTTCCTGGCTAC +
Preference number: 6 (lower is better)
Translates to: LCGTPADVQAPS*ISRQCCYLPGY
Trigger: GTAGCCAGGAAGGTAGCAGCACTGTCTGGAGATGCACGACGGTGCCTGGACATCTGCAGGCGTGCCACAGAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS GCA 72 bp CAAGCAGGACGGTGGTTTCCTGAGGTGACCCTCGGGTaGAGAATTGCTTTGCCAGCAGTTCTGCCGCATGGT +
Preference number: 6 (lower is better)
Translates to: QAGRWFPEVTLG*RIALPAVLPHG
Trigger: ACCATGCGGCAGAACTGCTGGCAAAGCAATTCTGCACCCGAGGGTCACCTCAGGAAACCACCGTCCTGCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS CCA 72 bp CTGCCTGCTGCAGGCAGCGTATCACTTCATGAACAGTaGCAGTCTTCCCTGTCCCAGGGACACCGGAGATGT +
Preference number: 6 (lower is better)
Translates to: LPAAGSVSLHEQ*QSSLSQGHRRC
Trigger: ACATCTCCGGTGTCCCTGGGACAGGGAAGACTGCCACTGTTCATGAAGTGATACGCTGCCTGCAGCAGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS CAA 72 bp GCTGGGGTCCAAGAAGGGCTCTCTGCACTCTTACTCTaGGCTCTCACGGGTTTCTGGCACTTGGCTGCACTC +
Preference number: 6 (lower is better)
Translates to: AGVQEGLSALLL*ALTGFWHLAAL
Trigger: GAGTGCAGCCAAGTGCCAGAAACCCGTGAGAGCCAAGAGTAAGAGTGCAGAGAGCCCTTCTTGGACCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS CAA 90 bp CTTTACTCGTCTTTCAGCGCATACAGCACATCATCCTGGCTGACGTaGAGCCGCACCCGAAGGAGCAGATCGTTCCTGCTGGGCTCCACA +
Preference number: 6 (lower is better)
Translates to: LYSSFSAYSTSSWLT*SRTRRSRSFLLGST
Trigger: TGTGGAGCCCAGCAGGAACGATCTGCTCCTTCGGGTGCGGCTCAACGTCAGCCAGGATGATGTGCTGTATGCGCTGAAAGACGAGTAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS CCA 72 bp CTGGGGTCCAAGAAGGGCTCTCTGCACTCTTACTCTTaGCTCTCACGGGTTTCTGGCACTTGGCTGCACTCT +
Preference number: 6 (lower is better)
Translates to: LGSKKGSLHSYS*LSRVSGTWLHS
Trigger: AGAGTGCAGCCAAGTGCCAGAAACCCGTGAGAGCCAAGAGTAAGAGTGCAGAGAGCCCTTCTTGGACCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS CCA 72 bp AGCTCCAGCCTCTTTCTGGCTCTTGGGGTAAGAGGATaGGTAGGAGTTTGGCGAGATTTGGAGGCGGAGTGC +
Preference number: 6 (lower is better)
Translates to: SSSLFLALGVRG*VGVWRDLEAEC
Trigger: GCACTCCGCCTCCAAATCTCGCCAAACTCCTACCCATCCTCTTACCCCAAGAGCCAGAAAGAGGCTGGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS CCA 72 bp ACTTCAAGGAAGATCGCAGGTTCCTGGACACAGTTCTaGGTGCTCTCCTTGGAAGGGGCGGTGTGGAAGCCT +
Preference number: 6 (lower is better)
Translates to: TSRKIAGSWTQF*VLSLEGAVWKP
Trigger: AGGCTTCCACACCGCCCCTTCCAAGGAGAGCACCCAGAACTGTGTCCAGGAACCTGCGATCTTCCTTGAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS CCA 72 bp CAGTCGGCTGGACACCCGGTTCATCATGATTCGCTCTaGCAGGTCCATTGTGTTGGCAATTGCCAGGACCAC +
Preference number: 6 (lower is better)
Translates to: QSAGHPVHHDSL*QVHCVGNCQDH
Trigger: GTGGTCCTGGCAATTGCCAACACAATGGACCTGCCAGAGCGAATCATGATGAACCGGGTGTCCAGCCGACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS CAA 72 bp TCTTTCAGCGCATACAGCACATCATCCTGGCTGACGTaGAGCCGCACCCGAAGGAGCAGATCGTTCCTGCTG +
Preference number: 6 (lower is better)
Translates to: SFSAYSTSSWLT*SRTRRSRSFLL
Trigger: CAGCAGGAACGATCTGCTCCTTCGGGTGCGGCTCAACGTCAGCCAGGATGATGTGCTGTATGCGCTGAAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS CAA 90 bp ACAAGGGCCTGCCAACCCATGAATAAGTTTTTCTGGTCTTCAGCCTaGTGGGGTAGTGTGCCATGGCCGGCTCCAAAGCTTCCTCCGGCT +
Preference number: 6 (lower is better)
Translates to: TRACQPMNKFFWSSA*WGSVPWPAPKLPPA
Trigger: AGCCGGAGGAAGCTTTGGAGCCGGCCATGGCACACTACCCCACAAGGCTGAAGACCAGAAAAACTTATTCATGGGTTGGCAGGCCCTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371566.1
CDS CCA 72 bp CAGGCTTCGACTACGGATCTGAGGAGCGGCACAACGTaGCGTTCTAGGCTTGAGACTCTTCTTTGGCACCTT +
Preference number: 6 (lower is better)
Translates to: QASTTDLRSGTT*RSRLETLLWHL
Trigger: AAGGTGCCAAAGAAGAGTCTCAAGCCTAGAACGCCACGTTGTGCCGCTCCTCAGATCCGTAGTCGAAGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS CCA 72 bp CTTTACTCGTCTTTCAGCGCATACAGCACATCATCCTaGCTGACGTTGAGCCGCACCCGAAGGAGCAGATCG +
Preference number: 6 (lower is better)
Translates to: LYSSFSAYSTSS*LTLSRTRRSRS
Trigger: CGATCTGCTCCTTCGGGTGCGGCTCAACGTCAGCCAGGATGATGTGCTGTATGCGCTGAAAGACGAGTAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS CAA 72 bp TGGTTTCCTGAGGTGACCCTCGGGTGCAGAATTGCTTaGCCAGCAGTTCTGCCGCATGGTTGGCTGTTGCTT +
Preference number: 6 (lower is better)
Translates to: WFPEVTLGCRIA*PAVLPHGWLLL
Trigger: AAGCAACAGCCAACCATGCGGCAGAACTGCTGGCAAAGCAATTCTGCACCCGAGGGTCACCTCAGGAAACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS CAA 90 bp ACATGTTCTGCTGGGGTCCAAGAAGGGCTCTCTGCACTCTTACTCTaGGCTCTCACGGGTTTCTGGCACTTGGCTGCACTCTCTTGTGGT +
Preference number: 6 (lower is better)
Translates to: TCSAGVQEGLSALLL*ALTGFWHLAALSCG
Trigger: ACCACAAGAGAGTGCAGCCAAGTGCCAGAAACCCGTGAGAGCCAAGAGTAAGAGTGCAGAGAGCCCTTCTTGGACCCCAGCAGAACATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS CAA 90 bp GGAGTTTGGCGAGATTTGGAGGCGGAGTGCCTTGATTCAATCCTTTaGGCCACATGTTCTGCTGGGGTCCAAGAAGGGCTCTCTGCACTC +
Preference number: 6 (lower is better)
Translates to: GVWRDLEAECLDSIL*ATCSAGVQEGLSAL
Trigger: GAGTGCAGAGAGCCCTTCTTGGACCCCAGCAGAACATGTGGCCAAAAGGATTGAATCAAGGCACTCCGCCTCCAAATCTCGCCAAACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS CAA 90 bp GACTTGGTGGGGCTCCGTCAGCTTCATGCCATTGACCTCAATGTATaGAAAGGGAGGAACATCATTGGCTTGGGCTGCCTGCTGCAGGCA +
Preference number: 6 (lower is better)
Translates to: DLVGLRQLHAIDLNV*KGRNIIGLGCLLQA
Trigger: TGCCTGCAGCAGGCAGCCCAAGCCAATGATGTTCCTCCCTTTCAATACATTGAGGTCAATGGCATGAAGCTGACGGAGCCCCACCAAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS CAA 90 bp ACAAGGGCCTGCCAACCCATGAATAAGTTTTTCTGGTCTTCAGCCTaGTGGGGTAGTGTGCCATGGCTTCCGGCTCCAAAGCTTCCTCCG +
Preference number: 6 (lower is better)
Translates to: TRACQPMNKFFWSSA*WGSVPWLPAPKLPP
Trigger: CGGAGGAAGCTTTGGAGCCGGAAGCCATGGCACACTACCCCACAAGGCTGAAGACCAGAAAAACTTATTCATGGGTTGGCAGGCCCTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371568.8
CDS CCA 72 bp CCAACAAGGGCCTGCCAACCCATGAATAAGTTTTTCTaGTCTTCAGCCTTGTGGGGTAGTGTGCCATGGCCG +
Preference number: 6 (lower is better)
Translates to: PTRACQPMNKFF*SSALWGSVPWP
Trigger: CGGCCATGGCACACTACCCCACAAGGCTGAAGACCAGAAAAACTTATTCATGGGTTGGCAGGCCCTTGTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371566.1
CDS CAA 72 bp CGAGATTTGGAGGCGGAGTGCCTTGATTCAATCCTTTaGGCCACATGTTCTGCTGGGGTCCAAGAAGGGCTC +
Preference number: 6 (lower is better)
Translates to: RDLEAECLDSIL*ATCSAGVQEGL
Trigger: GAGCCCTTCTTGGACCCCAGCAGAACATGTGGCCAAAAGGATTGAATCAAGGCACTCCGCCTCCAAATCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS TCA 72 bp GGTAGGAGTTTGGCGAGATTTGGAGGCGGAGTGCCTTaGTTCAATCCTTTTGGCCACATGTTCTGCTGGGGT +
Preference number: 6 (lower is better)
Translates to: GRSLARFGGGVP*FNPFGHMFCWG
Trigger: ACCCCAGCAGAACATGTGGCCAAAAGGATTGAATCAAGGCACTCCGCCTCCAAATCTCGCCAAACTCCTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS TCA 72 bp GGCTCCGTCAGCTTCATGCCATTGACCTCAATGTATTaGAAGGGAGGAACATCATTGGCTTGGGCTGCCTGC +
Preference number: 6 (lower is better)
Translates to: GSVSFMPLTSMY*KGGTSLAWAAC
Trigger: GCAGGCAGCCCAAGCCAATGATGTTCCTCCCTTTCAATACATTGAGGTCAATGGCATGAAGCTGACGGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS TCA 72 bp GCTGGATGGCATCATCTTCAAAGGCCTTTAGATGCTTaGGCCGGGACCTTAGGATCTGCTGCAGCTGGCTAT +
Preference number: 6 (lower is better)
Translates to: AGWHHLQRPLDA*AGTLGSAAAGY
Trigger: ATAGCCAGCTGCAGCAGATCCTAAGGTCCCGGCTCAAGCATCTAAAGGCCTTTGAAGATGATGCCATCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS CCA 72 bp GAGATTTGGAGGCGGAGTGCCTTGATTCAATCCTTTTaGCCACATGTTCTGCTGGGGTCCAAGAAGGGCTCT +
Preference number: 6 (lower is better)
Translates to: EIWRRSALIQSF*PHVLLGSKKGS
Trigger: AGAGCCCTTCTTGGACCCCAGCAGAACATGTGGCCAAAAGGATTGAATCAAGGCACTCCGCCTCCAAATCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS CCA 72 bp TATGTAAGGATGACTTCAAGGAAGATCGCAGGTTCCTaGACACAGTTCTGGGTGCTCTCCTTGGAAGGGGCG +
Preference number: 6 (lower is better)
Translates to: YVRMTSRKIAGS*TQFWVLSLEGA
Trigger: CGCCCCTTCCAAGGAGAGCACCCAGAACTGTGTCCAGGAACCTGCGATCTTCCTTGAAGTCATCCTTACATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS CAA 72 bp CTTGGGGTAAGAGGATGGGTAGGAGTTTGGCGAGATTaGGAGGCGGAGTGCCTTGATTCAATCCTTTTGGCC +
Preference number: 6 (lower is better)
Translates to: LGVRGWVGVWRD*EAECLDSILLA
Trigger: GGCCAAAAGGATTGAATCAAGGCACTCCGCCTCCAAATCTCGCCAAACTCCTACCCATCCTCTTACCCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS CAA 72 bp AGCTGGATGGCATCATCTTCAAAGGCCTTTAGATGCTaGAGCCGGGACCTTAGGATCTGCTGCAGCTGGCTA +
Preference number: 6 (lower is better)
Translates to: SWMASSSKAFRC*SRDLRICCSWL
Trigger: TAGCCAGCTGCAGCAGATCCTAAGGTCCCGGCTCAAGCATCTAAAGGCCTTTGAAGATGATGCCATCCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS CAA 90 bp GACCCTCGGGTGCAGAATTGCTTTGCCAGCAGTTCTGCCGCATGGTaGGCTGTTGCTTTTTGGCCTGTTAGCTTCTGCAAGATTTGCACA +
Preference number: 6 (lower is better)
Translates to: DPRVQNCFASSSAAW*AVAFWPVSFCKICT
Trigger: TGTGCAAATCTTGCAGAAGCTAACAGGCCAAAAAGCAACAGCCAACCATGCGGCAGAACTGCTGGCAAAGCAATTCTGCACCCGAGGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS CAA 90 bp CATGCCATTGACCTCAATGTATTGAAAGGGAGGAACATCATTGGCTaGGGCTGCCTGCTGCAGGCAGCGTATCACTTCATGAACAGTGGC +
Preference number: 6 (lower is better)
Translates to: HAIDLNVLKGRNIIG*GCLLQAAYHFMNSG
Trigger: GCCACTGTTCATGAAGTGATACGCTGCCTGCAGCAGGCAGCCCAAGCCAATGATGTTCCTCCCTTTCAATACATTGAGGTCAATGGCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS TCA 72 bp GAATCCAAGGAGGCACATGAAGTCTGCTGGGACATCTaGGGGTTACCTAAGTTGCCAAGCTCCAGCCTCTTT +
Preference number: 6 (lower is better)
Translates to: ESKEAHEVCWDI*GLPKLPSSSLF
Trigger: AAAGAGGCTGGAGCTTGGCAACTTAGGTAACCCTCAGATGTCCCAGCAGACTTCATGTGCCTCCTTGGATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS GCA 72 bp AATATTTCCTGTGCACCAGGCTTCCGGCCCAACAAATaGCGTTTACAGGCAGGGACTTCACAGAATCGGACA +
Preference number: 6 (lower is better)
Translates to: NISCAPGFRPNK*RLQAGTSQNRT
Trigger: TGTCCGATTCTGTGAAGTCCCTGCCTGTAAACGGCATTTGTTGGGCCGGAAGCCTGGTGCACAGGAAATATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS GCA 72 bp GTCACAGGCCGGGTAATCATACCAGAATATTTCCTGTaGACCAGGCTTCCGGCCCAACAAATGCCGTTTACA +
Preference number: 6 (lower is better)
Translates to: VTGRVIIPEYFL*TRLPAQQMPFT
Trigger: TGTAAACGGCATTTGTTGGGCCGGAAGCCTGGTGCACAGGAAATATTCTGGTATGATTACCCGGCCTGTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS GCA 72 bp GGATGGGTAGGAGTTTGGCGAGATTTGGAGGCGGAGTaGCTTGATTCAATCCTTTTGGCCACATGTTCTGCT +
Preference number: 6 (lower is better)
Translates to: GWVGVWRDLEAE*LDSILLATCSA
Trigger: AGCAGAACATGTGGCCAAAAGGATTGAATCAAGGCACTCCGCCTCCAAATCTCGCCAAACTCCTACCCATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS GCA 72 bp CATGGTGGGGTACGGCAGTCCCTCCATTCTGCACAGTaGCACATGTTGACTATATATCTGTTGAAACGTGGC +
Preference number: 6 (lower is better)
Translates to: HGGVRQSLHSAQ*HMLTIYLLKRG
Trigger: GCCACGTTTCAACAGATATATAGTCAACATGTGGCACTGTGCAGAATGGAGGGACTGCCGTACCCCACCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS CCA 72 bp TCTCCAGACAGTGCTGCTACCTTCCTGGCTACCAGCTaGATGGCATCATCTTCAAAGGCCTTTAGATGCTTG +
Preference number: 6 (lower is better)
Translates to: SPDSAATFLATS*MASSSKAFRCL
Trigger: CAAGCATCTAAAGGCCTTTGAAGATGATGCCATCCAGCTGGTAGCCAGGAAGGTAGCAGCACTGTCTGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS CCA 72 bp CCAACAAGGGCCTGCCAACCCATGAATAAGTTTTTCTaGTCTTCAGCCTTGTGGGGTAGTGTGCCATGGCTT +
Preference number: 6 (lower is better)
Translates to: PTRACQPMNKFF*SSALWGSVPWL
Trigger: AAGCCATGGCACACTACCCCACAAGGCTGAAGACCAGAAAAACTTATTCATGGGTTGGCAGGCCCTTGTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371568.8
CDS CAA 72 bp TGCCAACCCATGAATAAGTTTTTCTGGTCTTCAGCCTaGTGGGGTAGTGTGCCATGGCCGGCTCCAAAGCTT +
Preference number: 6 (lower is better)
Translates to: CQPMNKFFWSSA*WGSVPWPAPKL
Trigger: AAGCTTTGGAGCCGGCCATGGCACACTACCCCACAAGGCTGAAGACCAGAAAAACTTATTCATGGGTTGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371566.1
CDS CAA 72 bp GTGCAGAATTGCTTTGCCAGCAGTTCTGCCGCATGGTaGGCTGTTGCTTTTTGGCCTGTTAGCTTCTGCAAG +
Preference number: 6 (lower is better)
Translates to: VQNCFASSSAAW*AVAFWPVSFCK
Trigger: CTTGCAGAAGCTAACAGGCCAAAAAGCAACAGCCAACCATGCGGCAGAACTGCTGGCAAAGCAATTCTGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS CAA 72 bp TGCCAACCCATGAATAAGTTTTTCTGGTCTTCAGCCTaGTGGGGTAGTGTGCCATGGCTTCCGGCTCCAAAG +
Preference number: 6 (lower is better)
Translates to: CQPMNKFFWSSA*WGSVPWLPAPK
Trigger: CTTTGGAGCCGGAAGCCATGGCACACTACCCCACAAGGCTGAAGACCAGAAAAACTTATTCATGGGTTGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371568.8
CDS CAA 90 bp GGGCTCTCTGCACTCTTACTCTTGGCTCTCACGGGTTTCTGGCACTaGGCTGCACTCTCTTGTGGTTTATTCAACTCCGCAAATAGTTCT +
Preference number: 6 (lower is better)
Translates to: GLSALLLLALTGFWH*AALSCGLFNSANSS
Trigger: AGAACTATTTGCGGAGTTGAATAAACCACAAGAGAGTGCAGCCAAGTGCCAGAAACCCGTGAGAGCCAAGAGTAAGAGTGCAGAGAGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS CAA 90 bp TTTCTGGCTCTTGGGGTAAGAGGATGGGTAGGAGTTTGGCGAGATTaGGAGGCGGAGTGCCTTGATTCAATCCTTTTGGCCACATGTTCT +
Preference number: 6 (lower is better)
Translates to: FLALGVRGWVGVWRD*EAECLDSILLATCS
Trigger: AGAACATGTGGCCAAAAGGATTGAATCAAGGCACTCCGCCTCCAAATCTCGCCAAACTCCTACCCATCCTCTTACCCCAAGAGCCAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS TCA 72 bp ACTATATATCTGTTGAAACGTGGCTTCCTCCAGTCCTaGTCGACGGAACTCTGCGAGGATGGCTCTCAGGAA +
Preference number: 6 (lower is better)
Translates to: TIYLLKRGFLQS*STELCEDGSQE
Trigger: TTCCTGAGAGCCATCCTCGCAGAGTTCCGTCGATCAGGACTGGAGGAAGCCACGTTTCAACAGATATATAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS CCA 72 bp CTCTCTGCACTCTTACTCTTGGCTCTCACGGGTTTCTaGCACTTGGCTGCACTCTCTTGTGGTTTATTCAAC +
Preference number: 6 (lower is better)
Translates to: LSALLLLALTGF*HLAALSCGLFN
Trigger: GTTGAATAAACCACAAGAGAGTGCAGCCAAGTGCCAGAAACCCGTGAGAGCCAAGAGTAAGAGTGCAGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS CAA 72 bp GTACGGCAGTCCCTCCATTCTGCACAGTGCCACATGTaGACTATATATCTGTTGAAACGTGGCTTCCTCCAG +
Preference number: 6 (lower is better)
Translates to: VRQSLHSAQCHM*TIYLLKRGFLQ
Trigger: CTGGAGGAAGCCACGTTTCAACAGATATATAGTCAACATGTGGCACTGTGCAGAATGGAGGGACTGCCGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS TCA 72 bp CATAGACTTGGTGGGGCTCCGTCAGCTTCATGCCATTaGCCTCAATGTATTGAAAGGGAGGAACATCATTGG +
Preference number: 6 (lower is better)
Translates to: HRLGGAPSASCH*PQCIEREEHHW
Trigger: CCAATGATGTTCCTCCCTTTCAATACATTGAGGTCAATGGCATGAAGCTGACGGAGCCCCACCAAGTCTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS CAA 90 bp TCCGGTATGGTCAAGGAGTTTGCTTTCCACAAAATTGTAGATGTCTaGGAATTCCTGTTCCCGACAGGGAAGAGACTCAGGTACAGCAGA +
Preference number: 6 (lower is better)
Translates to: SGMVKEFAFHKIVDV*EFLFPTGKRLRYSR
Trigger: TCTGCTGTACCTGAGTCTCTTCCCTGTCGGGAACAGGAATTCCAAGACATCTACAATTTTGTGGAAAGCAAACTCCTTGACCATACCGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS GCA 72 bp AGGTTTGGTAGTGCAGTTTTCGATCCAACAAGGGCCTaGCAACCCATGAATAAGTTTTTCTGGTCTTCAGCC +
Preference number: 6 (lower is better)
Translates to: RFGSAVFDPTRA*QPMNKFFWSSA
Trigger: GGCTGAAGACCAGAAAAACTTATTCATGGGTTGGCAGGCCCTTGTTGGATCGAAAACTGCACTACCAAACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS CCA 72 bp TTCATAGTCAAGACAGAACTCTTTCTGCGGATACGATaGGGAGTAGAGGTCGCTTCATTCTGGGCTTTTGCT +
Preference number: 6 (lower is better)
Translates to: FIVKTELFLRIR*GVEVASFWAFA
Trigger: AGCAAAAGCCCAGAATGAAGCGACCTCTACTCCCCATCGTATCCGCAGAAAGAGTTCTGTCTTGACTATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS TCA 72 bp TGCAATTCGGGTTCTCAGGATTATGCGATGTTCAGGTaGAGCCTTCTTGTCATCCTCAGTATAAGAGAGTCC +
Preference number: 6 (lower is better)
Translates to: CNSGSQDYAMFR*SLLVILSIRES
Trigger: GGACTCTCTTATACTGAGGATGACAAGAAGGCTTCACCTGAACATCGCATAATCCTGAGAACCCGAATTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS TCA 72 bp TCCCCTTCAATCAACACAAACTGTCCAATCTGGATGTaGATCTCGGTGGAACAACCTTCTGTTTTCACACAC +
Preference number: 6 (lower is better)
Translates to: SPSINTNCPIWM*ISVEQPSVFTH
Trigger: GTGTGTGAAAACAGAAGGTTGTTCCACCGAGATTCACATCCAGATTGGACAGTTTGTGTTGATTGAAGGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS TCA 72 bp GGTTTGAAGTTTATCAGGCTGAGATCTCTTAGAAGGTaGGGTGATCTCCGAGAAGGCCACTTTCCGTTTTAT +
Preference number: 6 (lower is better)
Translates to: GLKFIRLRSLRR*GDLREGHFPFY
Trigger: ATAAAACGGAAAGTGGCCTTCTCGGAGATCACCTCACCTTCTAAGAGATCTCAGCCTGATAAACTTCAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS GCA 72 bp TGTTCTCTCCTCTCTAATGTCTATGGTTTTCGAAGCTaGAATTCGGGTTCTCAGGATTATGCGATGTTCAGG +
Preference number: 6 (lower is better)
Translates to: CSLLSNVYGFRS*NSGSQDYAMFR
Trigger: CCTGAACATCGCATAATCCTGAGAACCCGAATTGCAGCTTCGAAAACCATAGACATTAGAGAGGAGAGAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8
CDS GCA 72 bp AGATGTACATGCACCCTCCGGTATGGTCAAGGAGTTTaGTTTCCACAAAATTGTAGATGTCTTGGAATTCCT +
Preference number: 6 (lower is better)
Translates to: RCTCTLRYGQGV*FPQNCRCLGIP
Trigger: AGGAATTCCAAGACATCTACAATTTTGTGGAAAGCAAACTCCTTGACCATACCGGAGGGTGCATGTACATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371566.1
ENST00000371568.8