RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ORAI2 (Homo sapiens)

Ensembl gene IDs: ENSG00000160991

Ensembl transcript IDs: ENST00000356387.6, ENST00000403646.7, ENST00000403646.8, ENST00000473939.1, ENST00000473939.2, ENST00000478730.6, ENST00000478730.7, ENST00000482237.5, ENST00000488996.1, ENST00000495936.6, ENST00000495936.7, ENST00000498661.6, ENST00000611770.4, ENST00000611770.5

Found 806 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCACAGGGCCGCTCCCAGCCCCGGCCCTCGGCCCCTCACAAGACCTaGAGGCTGCGCTCATGCCCGTCCAGCTGGACCTTGAGCTTGTGG +
Preference number: 1 (lower is better)
Translates to: AQGRSQPRPSAPHKT*RLRSCPSSWTLSLW
Trigger: CCACAAGCTCAAGGTCCAGCTGGACGGGCATGAGCGCAGCCTGCAGGTCTTGTGAGGGGCCGAGGGCCGGGGCTGGGAGCGGCCCTGTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495936.6
3UTR CCA 90 bp CTAGAGATGTCCACGCCCCCTTGCCGGGGCAGCCTGGGAGGACACTaGCCAGTGACCAGCGACAGGAGGCCAGAGGGCGCTCCAGGAGTT +
Preference number: 1 (lower is better)
Translates to: LEMSTPPCRGSLGGH*PVTSDRRPEGAPGV
Trigger: AACTCCTGGAGCGCCCTCTGGCCTCCTGTCGCTGGTCACTGGCCAGTGTCCTCCCAGGCTGCCCCGGCAAGGGGGCGTGGACATCTCTAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR GCA 90 bp CCCAGCTCCCTCCAGGGCCAGGCAGGGAAGCACCAAGCCCTGGCGTaGACCTGCACCCACTCAAACGCCGAAGCCTTCGTGTCATCACTG +
Preference number: 1 (lower is better)
Translates to: PSSLQGQAGKHQALA*TCTHSNAEAFVSSL
Trigger: CAGTGATGACACGAAGGCTTCGGCGTTTGAGTGGGTGCAGGTGCACGCCAGGGCTTGGTGCTTCCCTGCCTGGCCCTGGAGGGAGCTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR TCA 90 bp CCCAGTATCACGGCCCCAACGGGCCCCTCACTGCGCATCCAGATGTaGGTCAGGTCGGAGCTCCAGCTGATCCTCACTGCACTGGAGCAG +
Preference number: 1 (lower is better)
Translates to: PSITAPTGPSLRIQM*VRSELQLILTALEQ
Trigger: CTGCTCCAGTGCAGTGAGGATCAGCTGGAGCTCCGACCTGACTCACATCTGGATGCGCAGTGAGGGGCCCGTTGGGGCCGTGATACTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR GCA 90 bp TCCCTCCAGGGCCAGGCAGGGAAGCACCAAGCCCTGGCGTGCACCTaGACCCACTCAAACGCCGAAGCCTTCGTGTCATCACTGTCACAC +
Preference number: 1 (lower is better)
Translates to: SLQGQAGKHQALACT*THSNAEAFVSSLSH
Trigger: GTGTGACAGTGATGACACGAAGGCTTCGGCGTTTGAGTGGGTGCAGGTGCACGCCAGGGCTTGGTGCTTCCCTGCCTGGCCCTGGAGGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR GCA 90 bp TGGTTGTACAAGCAGCTCAGGGCAGCTGGTGCTGCGGCGTGCATGTaGGGCCCGAGAGCGTGGCTTCGGGTCTACCAGATGCCTTCAAGG +
Preference number: 1 (lower is better)
Translates to: WLYKQLRAAGAAACM*GPRAWLRVYQMPSR
Trigger: CCTTGAAGGCATCTGGTAGACCCGAAGCCACGCTCTCGGGCCGCACATGCACGCCGCAGCACCAGCTGCCCTGAGCTGCTTGTACAACCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR GCA 90 bp GGTGTTTGGTTGTACAAGCAGCTCAGGGCAGCTGGTGCTGCGGCGTaGATGTGCGGCCCGAGAGCGTGGCTTCGGGTCTACCAGATGCCT +
Preference number: 1 (lower is better)
Translates to: GVWLYKQLRAAGAAA*MCGPRAWLRVYQMP
Trigger: AGGCATCTGGTAGACCCGAAGCCACGCTCTCGGGCCGCACATGCACGCCGCAGCACCAGCTGCCCTGAGCTGCTTGTACAACCAAACACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR GCA 90 bp GGGGAAAGGTGTTTGGTTGTACAAGCAGCTCAGGGCAGCTGGTGCTaGGGCGTGCATGTGCGGCCCGAGAGCGTGGCTTCGGGTCTACCA +
Preference number: 1 (lower is better)
Translates to: GERCLVVQAAQGSWC*GVHVRPESVASGLP
Trigger: TGGTAGACCCGAAGCCACGCTCTCGGGCCGCACATGCACGCCGCAGCACCAGCTGCCCTGAGCTGCTTGTACAACCAAACACCTTTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR CCA 90 bp CTCAGGGCAGCTGGTGCTGCGGCGTGCATGTGCGGCCCGAGAGCGTaGCTTCGGGTCTACCAGATGCCTTCAAGGAAAAGGCCAGAACCT +
Preference number: 1 (lower is better)
Translates to: LRAAGAAACMCGPRA*LRVYQMPSRKRPEP
Trigger: AGGTTCTGGCCTTTTCCTTGAAGGCATCTGGTAGACCCGAAGCCACGCTCTCGGGCCGCACATGCACGCCGCAGCACCAGCTGCCCTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR GCA 90 bp CGGCGTGCATGTGCGGCCCGAGAGCGTGGCTTCGGGTCTACCAGATaGCTTCAAGGAAAAGGCCAGAACCTGCACTGCACGGCACAGTCA +
Preference number: 1 (lower is better)
Translates to: RRACAARERGFGSTR*LQGKGQNLHCTAQS
Trigger: TGACTGTGCCGTGCAGTGCAGGTTCTGGCCTTTTCCTTGAAGGCATCTGGTAGACCCGAAGCCACGCTCTCGGGCCGCACATGCACGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR GCA 90 bp AGAGGGGAAAGGTGTTTGGTTGTACAAGCAGCTCAGGGCAGCTGGTaGTGCGGCGTGCATGTGCGGCCCGAGAGCGTGGCTTCGGGTCTA +
Preference number: 1 (lower is better)
Translates to: RGERCLVVQAAQGSW*CGVHVRPESVASGL
Trigger: TAGACCCGAAGCCACGCTCTCGGGCCGCACATGCACGCCGCAGCACCAGCTGCCCTGAGCTGCTTGTACAACCAAACACCTTTCCCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR GCA 90 bp GCGCATCCAGATGTGAGTCAGGTCGGAGCTCCAGCTGATCCTCACTaGACTGGAGCAGATAAGCCAGCCCAGGGGTCCACTCTCGAGGGG +
Preference number: 1 (lower is better)
Translates to: AHPDVSQVGAPADPH*TGADKPAQGSTLEG
Trigger: CCCCTCGAGAGTGGACCCCTGGGCTGGCTTATCTGCTCCAGTGCAGTGAGGATCAGCTGGAGCTCCGACCTGACTCACATCTGGATGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR CCA 90 bp CTTGTAGTCACTTGGTGTCATAACAAGGAGGGCACTCATTTGGCCTaGGCCGGCCCCTGGCCCCACTATCCACAGGCCAGGCCCGGCCAA +
Preference number: 1 (lower is better)
Translates to: LVVTWCHNKEGTHLA*AGPWPHYPQARPGQ
Trigger: TTGGCCGGGCCTGGCCTGTGGATAGTGGGGCCAGGGGCCGGCCCAGGCCAAATGAGTGCCCTCCTTGTTATGACACCAAGTGACTACAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR CCA 90 bp AGAAGAGGGGAAAGGTGTTTGGTTGTACAAGCAGCTCAGGGCAGCTaGTGCTGCGGCGTGCATGTGCGGCCCGAGAGCGTGGCTTCGGGT +
Preference number: 1 (lower is better)
Translates to: RRGERCLVVQAAQGS*CCGVHVRPESVASG
Trigger: ACCCGAAGCCACGCTCTCGGGCCGCACATGCACGCCGCAGCACCAGCTGCCCTGAGCTGCTTGTACAACCAAACACCTTTCCCCTCTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR TCA 90 bp CACTGCACGGCACAGTCACTGTGTGTGGTGGGACCCAGTGTCGGCTaGGAGGCCTGGAGGGGTCTTGCCTCCCTTGTAGTCACTTGGTGT +
Preference number: 1 (lower is better)
Translates to: HCTAQSLCVVGPSVG*EAWRGLASLVVTWC
Trigger: ACACCAAGTGACTACAAGGGAGGCAAGACCCCTCCAGGCCTCTCAGCCGACACTGGGTCCCACCACACACAGTGACTGTGCCGTGCAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR CCA 90 bp AAGGAAAAGGCCAGAACCTGCACTGCACGGCACAGTCACTGTGTGTaGTGGGACCCAGTGTCGGCTGAGAGGCCTGGAGGGGTCTTGCCT +
Preference number: 1 (lower is better)
Translates to: KEKARTCTARHSHCV*WDPVSAERPGGVLP
Trigger: AGGCAAGACCCCTCCAGGCCTCTCAGCCGACACTGGGTCCCACCACACACAGTGACTGTGCCGTGCAGTGCAGGTTCTGGCCTTTTCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR CCA 90 bp ACAGTAACTGGCCCCCAGATGGCACTGGAGATGCGTTCCACAGTCTaGGGAGTGTGGTACTGCGTGGGCAGGGGCACAGATGGTCCAGGA +
Preference number: 1 (lower is better)
Translates to: TVTGPQMALEMRSTV*GVWYCVGRGTDGPG
Trigger: TCCTGGACCATCTGTGCCCCTGCCCACGCAGTACCACACTCCCCAGACTGTGGAACGCATCTCCAGTGCCATCTGGGGGCCAGTTACTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR CCA 90 bp GGGTTTCTAGTGGCTGTGAGAGCCCAGCCGCTAGGTGGGAGGACGTaGCTCCCAGGCCACCTTAACTTCGGCTCCCTGGTCAACTCACTT +
Preference number: 1 (lower is better)
Translates to: GFLVAVRAQPLGGRT*LPGHLNFGSLVNSL
Trigger: AAGTGAGTTGACCAGGGAGCCGAAGTTAAGGTGGCCTGGGAGCCACGTCCTCCCACCTAGCGGCTGGGCTCTCACAGCCACTAGAAACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR TCA 90 bp ACTTTGGTCTTGAACTACCCGGCAGCCTTGCAAAATGTCTGCATCTaGCAAATCCCCGCCTCTGCGGACTCCCGGGCACAGGGCCGCTCC +
Preference number: 1 (lower is better)
Translates to: TLVLNYPAALQNVCI*QIPASADSRAQGRS
Trigger: GGAGCGGCCCTGTGCCCGGGAGTCCGCAGAGGCGGGGATTTGTCAGATGCAGACATTTTGCAAGGCTGCCGGGTAGTTCAAGACCAAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR TCA 90 bp AGGCTGCCCACTCTCATGCTCTTGGAGCTTCAAGCAAGGGGATGGTaGGGCATGGGACTGGGACACGCCCAAATAGGGAAGTGCCCGCTC +
Preference number: 1 (lower is better)
Translates to: RLPTLMLLELQARGW*GMGLGHAQIGKCPL
Trigger: GAGCGGGCACTTCCCTATTTGGGCGTGTCCCAGTCCCATGCCTCACCATCCCCTTGCTTGAAGCTCCAAGAGCATGAGAGTGGGCAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR GCA 90 bp ACTGGGCACTTAATACCTGCCTGGATGCTGCCAGGCCAAGAGCTCTaGCTGGGGACCAGGTACAGTAACTGGCCCCCAGATGGCACTGGA +
Preference number: 1 (lower is better)
Translates to: TGHLIPAWMLPGQEL*LGTRYSNWPPDGTG
Trigger: TCCAGTGCCATCTGGGGGCCAGTTACTGTACCTGGTCCCCAGGCAGAGCTCTTGGCCTGGCAGCATCCAGGCAGGTATTAAGTGCCCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR GCA 90 bp CCCAAGGGGCAGCCTGGCTTCTCAGGATTGGCAGAACCAAGGCACTaGCCTAGACGCTTTCCATGGAGTGGTGCCAGTTGCTTGGCACAC +
Preference number: 1 (lower is better)
Translates to: PKGQPGFSGLAEPRH*PRRFPWSGASCLAH
Trigger: GTGTGCCAAGCAACTGGCACCACTCCATGGAAAGCGTCTAGGGCAGTGCCTTGGTTCTGCCAATCCTGAGAAGCCAGGCTGCCCCTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR GCA 90 bp CTAAAGAGCTGGGAACAGCTTCAGAGTCAGGCTCAGCCTGACTCATaGTTGACACCCCCACGCCCAGGGAGGGTTGGGGGATGTGAGGAG +
Preference number: 1 (lower is better)
Translates to: LKSWEQLQSQAQPDS*LTPPRPGRVGGCEE
Trigger: CTCCTCACATCCCCCAACCCTCCCTGGGCGTGGGGGTGTCAAGCATGAGTCAGGCTGAGCCTGACTCTGAAGCTGTTCCCAGCTCTTTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR TCA 90 bp TTCTGGAGACATCCCGCTCCAGAGCAGGCCCAGCGGGGGCTCAGCTaGCATCCCTCAGCCGCTTCAGAAAGATGTTCAGGAAACACCGTT +
Preference number: 1 (lower is better)
Translates to: FWRHPAPEQAQRGLS*HPSAASERCSGNTV
Trigger: AACGGTGTTTCCTGAACATCTTTCTGAAGCGGCTGAGGGATGTCAGCTGAGCCCCCGCTGGGCCTGCTCTGGAGCGGGATGTCTCCAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR CCA 90 bp CTAGACTTGGATGTGGCTCCGTCCCCACCCATGTGCCACCATCACTaGGCACTTAATACCTGCCTGGATGCTGCCAGGCCAAGAGCTCTG +
Preference number: 1 (lower is better)
Translates to: LDLDVAPSPPMCHHH*ALNTCLDAARPRAL
Trigger: CAGAGCTCTTGGCCTGGCAGCATCCAGGCAGGTATTAAGTGCCCAGTGATGGTGGCACATGGGTGGGGACGGAGCCACATCCAAGTCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR CCA 90 bp GGAGCCACCGCCTGCAGGGTAACATCTGCTTACCGGTGTTTGGGGTaGCCATTTCCGCATCCATCAGACACTTTCCTCAGCAGACCAGGC +
Preference number: 1 (lower is better)
Translates to: GATACRVTSAYRCLG*PFPHPSDTFLSRPG
Trigger: GCCTGGTCTGCTGAGGAAAGTGTCTGATGGATGCGGAAATGGCCACCCCAAACACCGGTAAGCAGATGTTACCCTGCAGGCGGTGGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR TCA 90 bp ACTGTCTGTAAAGCAGCATCCCAGCCACTGAGCTCCCAGGAGGGCTaGAGAGCCCCGCATAGACCCAGGGGAAAGGCTGATGGGTTTCTA +
Preference number: 1 (lower is better)
Translates to: TVCKAASQPLSSQEG*RAPHRPRGKADGFL
Trigger: TAGAAACCCATCAGCCTTTCCCCTGGGTCTATGCGGGGCTCTTCAGCCCTCCTGGGAGCTCAGTGGCTGGGATGCTGCTTTACAGACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR GCA 90 bp CTAATCAGAGGGCTAGACTTGGATGTGGCTCCGTCCCCACCCATGTaGCACCATCACTGGGCACTTAATACCTGCCTGGATGCTGCCAGG +
Preference number: 1 (lower is better)
Translates to: LIRGLDLDVAPSPPM*HHHWALNTCLDAAR
Trigger: CCTGGCAGCATCCAGGCAGGTATTAAGTGCCCAGTGATGGTGGCACATGGGTGGGGACGGAGCCACATCCAAGTCTAGCCCTCTGATTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR TCA 90 bp CCAGCCGTGGGGAGCCGTTTGTTTAGGAGAGCCAGCCTGTCTTCTTaGCCCAAAGCCACTCCTTGGAGGAACGCTGACATGCTGACATTC +
Preference number: 1 (lower is better)
Translates to: PAVGSRLFRRASLSS*PKATPWRNADMLTF
Trigger: GAATGTCAGCATGTCAGCGTTCCTCCAAGGAGTGGCTTTGGGTCAAGAAGACAGGCTGGCTCTCCTAAACAAACGGCTCCCCACGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR TCA 90 bp ATCTGGAGAACGATGCACATAGAGACTTGGAGGGGAGAGGCCTCGTaGGGCTTGGGGATGCTGTGGAGCAAAGAAATCTCCCTCCCTGGG +
Preference number: 1 (lower is better)
Translates to: IWRTMHIETWRGEAS*GLGMLWSKEISLPG
Trigger: CCCAGGGAGGGAGATTTCTTTGCTCCACAGCATCCCCAAGCCTCACGAGGCCTCTCCCCTCCAAGTCTCTATGTGCATCGTTCTCCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR GCA 90 bp CATCCATCAGACACTTTCCTCAGCAGACCAGGCTGCCCACTCTCATaGTCTTGGAGCTTCAAGCAAGGGGATGGTGAGGCATGGGACTGG +
Preference number: 1 (lower is better)
Translates to: HPSDTFLSRPGCPLS*SWSFKQGDGEAWDW
Trigger: CCAGTCCCATGCCTCACCATCCCCTTGCTTGAAGCTCCAAGAGCATGAGAGTGGGCAGCCTGGTCTGCTGAGGAAAGTGTCTGATGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR GCA 90 bp GGGATGCTGTGGAGCAAAGAAATCTCCCTCCCTGGGGTCCTTCCATaGTGGCCCTTCCAGCACTCCTGCAGAGCACACTTTAGGAAACTC +
Preference number: 1 (lower is better)
Translates to: GMLWSKEISLPGVLP*WPFQHSCRAHFRKL
Trigger: GAGTTTCCTAAAGTGTGCTCTGCAGGAGTGCTGGAAGGGCCAGCATGGAAGGACCCCAGGGAGGGAGATTTCTTTGCTCCACAGCATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR GCA 90 bp TGGCCATTTCCGCATCCATCAGACACTTTCCTCAGCAGACCAGGCTaGCCACTCTCATGCTCTTGGAGCTTCAAGCAAGGGGATGGTGAG +
Preference number: 1 (lower is better)
Translates to: WPFPHPSDTFLSRPG*PLSCSWSFKQGDGE
Trigger: CTCACCATCCCCTTGCTTGAAGCTCCAAGAGCATGAGAGTGGGCAGCCTGGTCTGCTGAGGAAAGTGTCTGATGGATGCGGAAATGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR CCA 90 bp CGGCCACCATGGCCCTACCAATGGTCACTGCTATTCCCACAGCAATaGTTTGCCTCATGCCTCGAAACTAGAAAGGCTGGAGCTGGGAGA +
Preference number: 1 (lower is better)
Translates to: RPPWPYQWSLLFPQQ*FASCLETRKAGAGR
Trigger: TCTCCCAGCTCCAGCCTTTCTAGTTTCGAGGCATGAGGCAAACCATTGCTGTGGGAATAGCAGTGACCATTGGTAGGGCCATGGTGGCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR CCA 90 bp TTCTCAGGATTGGCAGAACCAAGGCACTGCCCTAGACGCTTTCCATaGAGTGGTGCCAGTTGCTTGGCACACCTGATTCCTAGCAGCCTC +
Preference number: 1 (lower is better)
Translates to: FSGLAEPRHCPRRFP*SGASCLAHLIPSSL
Trigger: GAGGCTGCTAGGAATCAGGTGTGCCAAGCAACTGGCACCACTCCATGGAAAGCGTCTAGGGCAGTGCCTTGGTTCTGCCAATCCTGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR TCA 90 bp CCTGTTAAGTTTGTGATACCAGAGTTGGGTCTGTCCTTGAAGCTGTaGCACGAAGACCCACGGCGACACCTTACCCAACCAGGATGGGGC +
Preference number: 1 (lower is better)
Translates to: PVKFVIPELGLSLKL*HEDPRRHLTQPGWG
Trigger: GCCCCATCCTGGTTGGGTAAGGTGTCGCCGTGGGTCTTCGTGTCACAGCTTCAAGGACAGACCCAACTCTGGTATCACAAACTTAACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR GCA 90 bp CCTGAGGTTTCCTCTCCCGGCCACCATGGCCCTACCAATGGTCACTaGTATTCCCACAGCAATGGTTTGCCTCATGCCTCGAAACTAGAA +
Preference number: 1 (lower is better)
Translates to: PEVSSPGHHGPTNGH*YSHSNGLPHASKLE
Trigger: TTCTAGTTTCGAGGCATGAGGCAAACCATTGCTGTGGGAATAGCAGTGACCATTGGTAGGGCCATGGTGGCCGGGAGAGGAAACCTCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR GCA 90 bp GAAACCGAATTTCTAGGCTGCAATGGCATTCCTCATCGCCCATGCTaGCCTTCAAGGCGTTTCTGCAGCTCCAACAACAGCTCACCCTCC +
Preference number: 1 (lower is better)
Translates to: ETEFLGCNGIPHRPC*PSRRFCSSNNSSPS
Trigger: GGAGGGTGAGCTGTTGTTGGAGCTGCAGAAACGCCTTGAAGGGCAGCATGGGCGATGAGGAATGCCATTGCAGCCTAGAAATTCGGTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR GCA 90 bp CCAGAAACCGAATTTCTAGGCTGCAATGGCATTCCTCATCGCCCATaGTGCCCTTCAAGGCGTTTCTGCAGCTCCAACAACAGCTCACCC +
Preference number: 1 (lower is better)
Translates to: PETEFLGCNGIPHRP*CPSRRFCSSNNSSP
Trigger: GGGTGAGCTGTTGTTGGAGCTGCAGAAACGCCTTGAAGGGCAGCATGGGCGATGAGGAATGCCATTGCAGCCTAGAAATTCGGTTTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR CCA 90 bp ATGCTGTGGAGCAAAGAAATCTCCCTCCCTGGGGTCCTTCCATGCTaGCCCTTCCAGCACTCCTGCAGAGCACACTTTAGGAAACTCCAT +
Preference number: 1 (lower is better)
Translates to: MLWSKEISLPGVLPC*PFQHSCRAHFRKLH
Trigger: ATGGAGTTTCCTAAAGTGTGCTCTGCAGGAGTGCTGGAAGGGCCAGCATGGAAGGACCCCAGGGAGGGAGATTTCTTTGCTCCACAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR GCA 90 bp CCCTACCAATGGTCACTGCTATTCCCACAGCAATGGTTTGCCTCATaGCTCGAAACTAGAAAGGCTGGAGCTGGGAGAACGAGAACCCTA +
Preference number: 1 (lower is better)
Translates to: PYQWSLLFPQQWFAS*LETRKAGAGRTRTL
Trigger: TAGGGTTCTCGTTCTCCCAGCTCCAGCCTTTCTAGTTTCGAGGCATGAGGCAAACCATTGCTGTGGGAATAGCAGTGACCATTGGTAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR CCA 90 bp ACCGTAAGAGGCGTTTCTACAGGCTGCAGGAAAGTACATACATGCTaGAGGGCAAAGGTCGCAGACAAATGTCTGCAGGGGACACAAAGG +
Preference number: 1 (lower is better)
Translates to: TVRGVSTGCRKVHTC*RAKVADKCLQGTQR
Trigger: CCTTTGTGTCCCCTGCAGACATTTGTCTGCGACCTTTGCCCTCCAGCATGTATGTACTTTCCTGCAGCCTGTAGAAACGCCTCTTACGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR TCA 90 bp CAGCCTGGCTTTGCCCCCAACGCTCTTAGCAACACAGTCCCTCATTaGACCAAACGGTTCTATCTCAGGAGAAGTCATCCAGTCCTTATG +
Preference number: 1 (lower is better)
Translates to: QPGFAPNALSNTVPH*TKRFYLRRSHPVLM
Trigger: CATAAGGACTGGATGACTTCTCCTGAGATAGAACCGTTTGGTTCAATGAGGGACTGTGTTGCTAAGAGCGTTGGGGGCAAAGCCAGGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR CCA 90 bp CGTTTCATCCAGGGCAGCTGTTTTAAAAACCCGCACACAGGACAGTaGCTGTCTCTGCCGCACGTGATCTACATAACGCCATGCATAGAT +
Preference number: 1 (lower is better)
Translates to: RFIQGSCFKNPHTGQ*LSLPHVIYITPCID
Trigger: ATCTATGCATGGCGTTATGTAGATCACGTGCGGCAGAGACAGCCACTGTCCTGTGTGCGGGTTTTTAAAACAGCTGCCCTGGATGAAACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR TCA 90 bp ACACATTCCGCCTTCCAAGTTTCTAAACCAGAAACACCTGCGTTTTaGAACAGGTGGTCAGGTACTAAACGGAGAGGGTGTACCACGTGG +
Preference number: 1 (lower is better)
Translates to: THSAFQVSKPETPAF*NRWSGTKRRGCTTW
Trigger: CCACGTGGTACACCCTCTCCGTTTAGTACCTGACCACCTGTTTCAAAACGCAGGTGTTTCTGGTTTAGAAACTTGGAAGGCGGAATGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR CCA 90 bp GGATTAGGGAACAGGGTTGAAGATTTGAAGTTTAGACTAAAGAGCTaGGAACAGCTTCAGAGTCAGGCTCAGCCTGACTCATGCTTGACA +
Preference number: 1 (lower is better)
Translates to: GLGNRVEDLKFRLKS*EQLQSQAQPDSCLT
Trigger: TGTCAAGCATGAGTCAGGCTGAGCCTGACTCTGAAGCTGTTCCCAGCTCTTTAGTCTAAACTTCAAATCTTCAACCCTGTTCCCTAATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR TCA 90 bp TCATCCAGTCCTTATGGTATTAAGACAAGAGGAAAACTTTGGTCTTaGACTACCCGGCAGCCTTGCAAAATGTCTGCATCTGACAAATCC +
Preference number: 1 (lower is better)
Translates to: SSSPYGIKTRGKLWS*TTRQPCKMSASDKS
Trigger: GGATTTGTCAGATGCAGACATTTTGCAAGGCTGCCGGGTAGTTCAAGACCAAAGTTTTCCTCTTGTCTTAATACCATAAGGACTGGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp AGCGCCAGGCAGAGGCACCCTGCGCTCTCGGGGCGGAGCCCCATGGCGGCGTGTGGCACTCATTTGGCCTaGGCCGGCCCCTGGCCCCAC +
Preference number: 2 (lower is better)
Translates to: SARQRHPALSGRSPMAACGTHLA*AGPWPH
Trigger: GTGGGGCCAGGGGCCGGCCCAGGCCAAATGAGTGCC...ACACGCCGCCATGGGGCTCCGCCCCGAGAGCGCAGGGTGCCTCTGCCTGGCGCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR TCA 90 bp AGCGCCAGGCAGAGGCACCCTGCGCTCTCGGGGCGGAGCCCCATGGCGGCGTGTGCTCCTGTCTTCCCCTaGAGCCAGGCCACCCAGCTC +
Preference number: 2 (lower is better)
Translates to: SARQRHPALSGRSPMAACAPVFP*SQATQL
Trigger: GAGCTGGGTGGCCTGGCTTCAGGGGAAGACAGGAGC...ACACGCCGCCATGGGGCTCCGCCCCGAGAGCGCAGGGTGCCTCTGCCTGGCGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR TCA 90 bp CTGGTGCTGCGGCGTGCATGTGCGGCCCGAGAGCGTGGCTTCGGGTCTACCAGACACGCATGCCGGGTCTaGGACTCCCCCGGACCGCTG +
Preference number: 2 (lower is better)
Translates to: LVLRRACAARERGFGSTRHACRV*DSPGPL
Trigger: CAGCGGTCCGGGGGAGTCTCAGACCCGGCATGCGTG...TCTGGTAGACCCGAAGCCACGCTCTCGGGCCGCACATGCACGCCGCAGCACCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR TCA 90 bp AGCGCCAGGCAGAGGCACCCTGCGCTCTCGGGGCGGAGCCCCATGGCGGCGTGTCGTCCAGCTGGACCTTaGGCTTGTGGAGCTCCTCGA +
Preference number: 2 (lower is better)
Translates to: SARQRHPALSGRSPMAACRPAGP*ACGAPR
Trigger: TCGAGGAGCTCCACAAGCTCAAGGTCCAGCTGGACG...ACACGCCGCCATGGGGCTCCGCCCCGAGAGCGCAGGGTGCCTCTGCCTGGCGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495936.6
3UTR-3UTR CCA 90 bp AGCGCCAGGCAGAGGCACCCTGCGCTCTCGGGGCGGAGCCCCATGGCGGCGTGTATGTCTTCTCCGGCCTaGCCAGGCTGCCCACCATTG +
Preference number: 2 (lower is better)
Translates to: SARQRHPALSGRSPMAACMSSPA*PGCPPL
Trigger: CAATGGTGGGCAGCCTGGCCAGGCCGGAGAAGACAT...ACACGCCGCCATGGGGCTCCGCCCCGAGAGCGCAGGGTGCCTCTGCCTGGCGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR TCA 90 bp GCACGGCACAGTCACTGTGTGTGGTGGGACCCAGTGTCGGCTGAGAGGCCTGGACACGCATGCCGGGTCTaGGACTCCCCCGGACCGCTG +
Preference number: 2 (lower is better)
Translates to: ARHSHCVWWDPVSAERPGHACRV*DSPGPL
Trigger: CAGCGGTCCGGGGGAGTCTCAGACCCGGCATGCGTG...TCCAGGCCTCTCAGCCGACACTGGGTCCCACCACACACAGTGACTGTGCCGTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR TCA 90 bp CTGGTGCTGCGGCGTGCATGTGCGGCCCGAGAGCGTGGCTTCGGGTCTACCAGAGCCAGGCCCGGCCAATaGCCTTGCCTAGGCAGGAAG +
Preference number: 2 (lower is better)
Translates to: LVLRRACAARERGFGSTRARPGQ*PCLGRK
Trigger: CTTCCTGCCTAGGCAAGGTCATTGGCCGGGCCTGGC...TCTGGTAGACCCGAAGCCACGCTCTCGGGCCGCACATGCACGCCGCAGCACCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp CACGGCACAGTCACTGTGTGTGGTGGGACCCAGTGTCGGCTGAGAGGCCTGGAGCGGACCGCTGGGTGCTaGTTGGAGCCCCTCCTGGCC +
Preference number: 2 (lower is better)
Translates to: HGTVTVCGGTQCRLRGLERTAGC*LEPLLA
Trigger: GGCCAGGAGGGGCTCCAAGCAGCACCCAGCGGTCCG...CTCCAGGCCTCTCAGCCGACACTGGGTCCCACCACACACAGTGACTGTGCCGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp CTGGCCAGTGACCAGCGACAGGAGGCCAGAGGGCGCTCCAGGAGTTTTTCAGGCCCCCGGACCGCTGGGTaGTGCTTGGAGCCCCTCCTG +
Preference number: 2 (lower is better)
Translates to: LASDQRQEARGRSRSFSGPRTAG*CLEPLL
Trigger: CAGGAGGGGCTCCAAGCAGCACCCAGCGGTCCGGGG...GCCTGAAAAACTCCTGGAGCGCCCTCTGGCCTCCTGTCGCTGGTCACTGGCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp CACGGCACAGTCACTGTGTGTGGTGGGACCCAGTGTCGGCTGAGAGGCCTGGAGCCCCGGACCGCTGGGTaGTGCTTGGAGCCCCTCCTG +
Preference number: 2 (lower is better)
Translates to: HGTVTVCGGTQCRLRGLEPRTAG*CLEPLL
Trigger: CAGGAGGGGCTCCAAGCAGCACCCAGCGGTCCGGGG...CTCCAGGCCTCTCAGCCGACACTGGGTCCCACCACACACAGTGACTGTGCCGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp GGCCCCACCAGGGCTCTGCAGCATCTGAGGCAAAAAGTCTTGGGCCGGACGAGGCAGGGCAGCTGGTGCTaGGGCGTGCATGTGCGGCCC +
Preference number: 2 (lower is better)
Translates to: GPTRALQHLRQKVLGRTRQGSWC*GVHVRP
Trigger: GGGCCGCACATGCACGCCGCAGCACCAGCTGCCCTG...CCTCGTCCGGCCCAAGACTTTTTGCCTCAGATGCTGCAGAGCCCTGGTGGGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp CTGGTGCTGCGGCGTGCATGTGCGGCCCGAGAGCGTGGCTTCGGGTCTACCAGAGCTTGGAGCCCCTCCTaGCCCAGGACTGATGGGCAG +
Preference number: 2 (lower is better)
Translates to: LVLRRACAARERGFGSTRAWSPS*PRTDGQ
Trigger: CTGCCCATCAGTCCTGGGCCAGGAGGGGCTCCAAGC...TCTGGTAGACCCGAAGCCACGCTCTCGGGCCGCACATGCACGCCGCAGCACCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp GGCACAGTCACTGTGTGTGGTGGGACCCAGTGTCGGCTGAGAGGCCTGGAGGGGTCTGTGGCCGAGAGCTaGAGGCCAGTGGCTGCGGGG +
Preference number: 2 (lower is better)
Translates to: GTVTVCGGTQCRLRGLEGSVAES*RPVAAG
Trigger: CCCCGCAGCCACTGGCCTCCAGCTCTCGGCCACAGA...CCCCTCCAGGCCTCTCAGCCGACACTGGGTCCCACCACACACAGTGACTGTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp GCACGGCACAGTCACTGTGTGTGGTGGGACCCAGTGTCGGCTGAGAGGCCTGGAGGCACTCATTTGGCCTaGGCCGGCCCCTGGCCCCAC +
Preference number: 2 (lower is better)
Translates to: ARHSHCVWWDPVSAERPGGTHLA*AGPWPH
Trigger: GTGGGGCCAGGGGCCGGCCCAGGCCAAATGAGTGCC...TCCAGGCCTCTCAGCCGACACTGGGTCCCACCACACACAGTGACTGTGCCGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp AGCGCCAGGCAGAGGCACCCTGCGCTCTCGGGGCGGAGCCCCATGGCGGCGTGTATGCGTTCCACAGTCTaGGGAGTGTGGTACTGCGTG +
Preference number: 2 (lower is better)
Translates to: SARQRHPALSGRSPMAACMRSTV*GVWYCV
Trigger: CACGCAGTACCACACTCCCCAGACTGTGGAACGCAT...ACACGCCGCCATGGGGCTCCGCCCCGAGAGCGCAGGGTGCCTCTGCCTGGCGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR TCA 90 bp AGAGACCCCAGCCAGGCCACCCAGAATTCCACGGCACGGCCAACCCGGACCCCGGCCACTCAGCACCCATaGAGTCCACCACGGGTCTCT +
Preference number: 2 (lower is better)
Translates to: RDPSQATQNSTARPTRTPATQHP*SPPRVS
Trigger: AGAGACCCGTGGTGGACTTCATGGGTGCTGAGTGGC...CGGGGTCCGGGTTGGCCGTGCCGTGGAATTCTGGGTGGCCTGGCTGGGGTCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR TCA 90 bp AGAGACCCCAGCCAGGCCACCCAGAATTCCACGGCACGGCCAACCCGGACCCCGGCCCAAGGGAGTGGCTaGGTCAGCCTTAGAGGCCAT +
Preference number: 2 (lower is better)
Translates to: RDPSQATQNSTARPTRTPAQGSG*VSLRGH
Trigger: ATGGCCTCTAAGGCTGACTCAGCCACTCCCTTGGGC...CGGGGTCCGGGTTGGCCGTGCCGTGGAATTCTGGGTGGCCTGGCTGGGGTCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR TCA 90 bp AGCGCCAGGCAGAGGCACCCTGCGCTCTCGGGGCGGAGCCCCATGGCGGCGTGTTGTAGTGCAATGGCGTaGTCTCAGCTCACTGCAACC +
Preference number: 2 (lower is better)
Translates to: SARQRHPALSGRSPMAACCSAMA*SQLTAT
Trigger: GGTTGCAGTGAGCTGAGATCACGCCATTGCACTACA...ACACGCCGCCATGGGGCTCCGCCCCGAGAGCGCAGGGTGCCTCTGCCTGGCGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp AGGGCTAGACTTGGATGTGGCTCCGTCCCCACCCATGTGCCACCATCACTGGGCCCCCGGACCGCTGGGTaGTGCTTGGAGCCCCTCCTG +
Preference number: 2 (lower is better)
Translates to: RARLGCGSVPTHVPPSLGPRTAG*CLEPLL
Trigger: CAGGAGGGGCTCCAAGCAGCACCCAGCGGTCCGGGG...GCCCAGTGATGGTGGCACATGGGTGGGGACGGAGCCACATCCAAGTCTAGCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp GCACGGCACAGTCACTGTGTGTGGTGGGACCCAGTGTCGGCTGAGAGGCCTGGAAGAGCCCCCGCCTCCTaGTGCCACAGCCCAAGGGAG +
Preference number: 2 (lower is better)
Translates to: ARHSHCVWWDPVSAERPGRAPAS*CHSPRE
Trigger: CTCCCTTGGGCTGTGGCAGCAGGAGGCGGGGGCTCT...TCCAGGCCTCTCAGCCGACACTGGGTCCCACCACACACAGTGACTGTGCCGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp AAGACCCACGGCGACACCTTACCCAACCAGGATGGGGCTGGAGAAGGCCACGCCGCTGCGGCGTGCATGTaGGGCCCGAGAGCGTGGCTT +
Preference number: 2 (lower is better)
Translates to: KTHGDTLPNQDGAGEGHAAAACM*GPRAWL
Trigger: AAGCCACGCTCTCGGGCCGCACATGCACGCCGCAGC...GGCGTGGCCTTCTCCAGCCCCATCCTGGTTGGGTAAGGTGTCGCCGTGGGTCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp CTGGCCAGTGACCAGCGACAGGAGGCCAGAGGGCGCTCCAGGAGTTTTTCAGGCGCTCAGGGCAGCTGGTaGTGCGGCGTGCATGTGCGG +
Preference number: 2 (lower is better)
Translates to: LASDQRQEARGRSRSFSGAQGSW*CGVHVR
Trigger: CCGCACATGCACGCCGCAGCACCAGCTGCCCTGAGC...GCCTGAAAAACTCCTGGAGCGCCCTCTGGCCTCCTGTCGCTGGTCACTGGCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp AGAGACCCCAGCCAGGCCACCCAGAATTCCACGGCACGGCCAACCCGGACCCCGGCCAAGGAACCAGCCTaGCTTTGCCCCCAACGCTCT +
Preference number: 2 (lower is better)
Translates to: RDPSQATQNSTARPTRTPAKEPA*LCPQRS
Trigger: AGAGCGTTGGGGGCAAAGCCAGGCTGGTTCCTTGGC...CGGGGTCCGGGTTGGCCGTGCCGTGGAATTCTGGGTGGCCTGGCTGGGGTCTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp CACGGCACAGTCACTGTGTGTGGTGGGACCCAGTGTCGGCTGAGAGGCCTGGAGTCTGTGGCCGAGAGCTaGAGGCCAGTGGCTGCGGGG +
Preference number: 2 (lower is better)
Translates to: HGTVTVCGGTQCRLRGLESVAES*RPVAAG
Trigger: CCCCGCAGCCACTGGCCTCCAGCTCTCGGCCACAGA...CTCCAGGCCTCTCAGCCGACACTGGGTCCCACCACACACAGTGACTGTGCCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR CAA 90 bp CTGCAGCCTCCACCGGAAGTGCAGTCTTTCTCGAGGCTTGTGGGCTaGCTGGCCTGGGGCTCGGTACTGAGGCCACTGCCCAGCCCAAGG +
Preference number: 2 (lower is better)
Translates to: LQPPPEVQSFSRLVG*LAWGSVLRPLPSPR
Trigger: CCTTGGGCTGGGCAGTGGCCTCAGTACCGAGCCCCAGGCCAGCAAGCCCACAAGCCTCGAGAAAGACTGCACTTCCGGTGGAGGCTGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR TCA 90 bp CTGCTGCCACAGCCCAAGGGAGTGGCTGAGTCAGCCTTAGAGGCCATTCTGTGGCACGCATGCCGGGTCTaGGACTCCCCCGGACCGCTG +
Preference number: 2 (lower is better)
Translates to: LLPQPKGVAESALEAILWHACRV*DSPGPL
Trigger: CAGCGGTCCGGGGGAGTCTCAGACCCGGCATGCGTG...CCACAGAATGGCCTCTAAGGCTGACTCAGCCACTCCCTTGGGCTGTGGCAGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR TCA 90 bp CTGCTGCCACAGCCCAAGGGAGTGGCTGAGTCAGCCTTAGAGGCCATTCTGTGGACATCCCCCAGGGCCTaGCCCCACTGCCGAGGGCTG +
Preference number: 2 (lower is better)
Translates to: LLPQPKGVAESALEAILWTSPRA*PHCRGL
Trigger: CAGCCCTCGGCAGTGGGGTCAGGCCCTGGGGGATGT...CCACAGAATGGCCTCTAAGGCTGACTCAGCCACTCCCTTGGGCTGTGGCAGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR TCA 90 bp GGCCCCACCAGGGCTCTGCAGCATCTGAGGCAAAAAGTCTTGGGCCGGACGAGGGCCAGGCCCGGCCAATaGCCTTGCCTAGGCAGGAAG +
Preference number: 2 (lower is better)
Translates to: GPTRALQHLRQKVLGRTRARPGQ*PCLGRK
Trigger: CTTCCTGCCTAGGCAAGGTCATTGGCCGGGCCTGGC...CCTCGTCCGGCCCAAGACTTTTTGCCTCAGATGCTGCAGAGCCCTGGTGGGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp CTGCTGCCACAGCCCAAGGGAGTGGCTGAGTCAGCCTTAGAGGCCATTCTGTGGCGGACCGCTGGGTGCTaGTTGGAGCCCCTCCTGGCC +
Preference number: 2 (lower is better)
Translates to: LLPQPKGVAESALEAILWRTAGC*LEPLLA
Trigger: GGCCAGGAGGGGCTCCAAGCAGCACCCAGCGGTCCG...CCACAGAATGGCCTCTAAGGCTGACTCAGCCACTCCCTTGGGCTGTGGCAGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp AAGGGAGTGGCTGAGTCAGCCTTAGAGGCCATTCTGTGGCCGAGAGCTGGAGGCCCCCGGACCGCTGGGTaGTGCTTGGAGCCCCTCCTG +
Preference number: 2 (lower is better)
Translates to: KGVAESALEAILWPRAGGPRTAG*CLEPLL
Trigger: CAGGAGGGGCTCCAAGCAGCACCCAGCGGTCCGGGG...GCCTCCAGCTCTCGGCCACAGAATGGCCTCTAAGGCTGACTCAGCCACTCCCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp ACAGTCACTGTGTGTGGTGGGACCCAGTGTCGGCTGAGAGGCCTGGAGGGGTCTAGAGCCCCCGCCTCCTaGTGCCACAGCCCAAGGGAG +
Preference number: 2 (lower is better)
Translates to: TVTVCGGTQCRLRGLEGSRAPAS*CHSPRE
Trigger: CTCCCTTGGGCTGTGGCAGCAGGAGGCGGGGGCTCT...AGACCCCTCCAGGCCTCTCAGCCGACACTGGGTCCCACCACACACAGTGACTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp GGCCCCACCAGGGCTCTGCAGCATCTGAGGCAAAAAGTCTTGGGCCGGACGAGGCCCACCTGTTCCTGCTaGCCCACAGGGACTTGGGGC +
Preference number: 2 (lower is better)
Translates to: GPTRALQHLRQKVLGRTRPTCSC*PTGTWG
Trigger: GCCCCAAGTCCCTGTGGGGCAGCAGGAACAGGTGGG...CCTCGTCCGGCCCAAGACTTTTTGCCTCAGATGCTGCAGAGCCCTGGTGGGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp ACAGTCACTGTGTGTGGTGGGACCCAGTGTCGGCTGAGAGGCCTGGAGGGGTCTACTCCCCCGGACCGCTaGGTGCTGCTTGGAGCCCCT +
Preference number: 2 (lower is better)
Translates to: TVTVCGGTQCRLRGLEGSTPPDR*VLLGAP
Trigger: AGGGGCTCCAAGCAGCACCCAGCGGTCCGGGGGAGT...AGACCCCTCCAGGCCTCTCAGCCGACACTGGGTCCCACCACACACAGTGACTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp GCACGGCACAGTCACTGTGTGTGGTGGGACCCAGTGTCGGCTGAGAGGCCTGGACCCTCTGAGTCCGTGTaGCCAGGGCTCTGGCTGGGA +
Preference number: 2 (lower is better)
Translates to: ARHSHCVWWDPVSAERPGPSESV*PGLWLG
Trigger: TCCCAGCCAGAGCCCTGGCCACACGGACTCAGAGGG...TCCAGGCCTCTCAGCCGACACTGGGTCCCACCACACACAGTGACTGTGCCGTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp ACAGTCACTGTGTGTGGTGGGACCCAGTGTCGGCTGAGAGGCCTGGAGGGGTCTAGGAGGGCACTCATTTaGCCTGGGCCGGCCCCTGGC +
Preference number: 2 (lower is better)
Translates to: TVTVCGGTQCRLRGLEGSRRALI*PGPAPG
Trigger: GCCAGGGGCCGGCCCAGGCCAAATGAGTGCCCTCCT...AGACCCCTCCAGGCCTCTCAGCCGACACTGGGTCCCACCACACACAGTGACTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp AGCGCCAGGCAGAGGCACCCTGCGCTCTCGGGGCGGAGCCCCATGGCGGCGTGTATGTGCCACCATCACTaGGCACTTAATACCTGCCTG +
Preference number: 2 (lower is better)
Translates to: SARQRHPALSGRSPMAACMCHHH*ALNTCL
Trigger: CAGGCAGGTATTAAGTGCCCAGTGATGGTGGCACAT...ACACGCCGCCATGGGGCTCCGCCCCGAGAGCGCAGGGTGCCTCTGCCTGGCGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR TCA 90 bp CGTCCCCACCCATGTGCCACCATCACTGGGCACTTAATACCTGCCTGGATGCTGACATCCCCCAGGGCCTaGCCCCACTGCCGAGGGCTG +
Preference number: 2 (lower is better)
Translates to: RPHPCATITGHLIPAWMLTSPRA*PHCRGL
Trigger: CAGCCCTCGGCAGTGGGGTCAGGCCCTGGGGGATGT...CAGCATCCAGGCAGGTATTAAGTGCCCAGTGATGGTGGCACATGGGTGGGGACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR TCA 90 bp AGGGCTAGACTTGGATGTGGCTCCGTCCCCACCCATGTGCCACCATCACTGGGCGCCAGGCCCGGCCAATaGCCTTGCCTAGGCAGGAAG +
Preference number: 2 (lower is better)
Translates to: RARLGCGSVPTHVPPSLGARPGQ*PCLGRK
Trigger: CTTCCTGCCTAGGCAAGGTCATTGGCCGGGCCTGGC...GCCCAGTGATGGTGGCACATGGGTGGGGACGGAGCCACATCCAAGTCTAGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp CCCGAGAGCGTGGCTTCGGGTCTACCAGATGCCTTCAAGGAAAAGGCCAGAACCCGGACCGCTGGGTGCTaGTTGGAGCCCCTCCTGGCC +
Preference number: 2 (lower is better)
Translates to: PESVASGLPDAFKEKARTRTAGC*LEPLLA
Trigger: GGCCAGGAGGGGCTCCAAGCAGCACCCAGCGGTCCG...GGTTCTGGCCTTTTCCTTGAAGGCATCTGGTAGACCCGAAGCCACGCTCTCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp GGCACAGTCACTGTGTGTGGTGGGACCCAGTGTCGGCTGAGAGGCCTGGAGGGGCACCAAGCCCTGGCGTaGACCTGCACCCACTCAAAC +
Preference number: 2 (lower is better)
Translates to: GTVTVCGGTQCRLRGLEGHQALA*TCTHSN
Trigger: GTTTGAGTGGGTGCAGGTGCACGCCAGGGCTTGGTG...CCCCTCCAGGCCTCTCAGCCGACACTGGGTCCCACCACACACAGTGACTGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp GCACGGCACAGTCACTGTGTGTGGTGGGACCCAGTGTCGGCTGAGAGGCCTGGACCGGCCTGGCCAGGCTaGCCACCATTGGAAACATCC +
Preference number: 2 (lower is better)
Translates to: ARHSHCVWWDPVSAERPGPAWPG*PPLETS
Trigger: GGATGTTTCCAATGGTGGGCAGCCTGGCCAGGCCGG...TCCAGGCCTCTCAGCCGACACTGGGTCCCACCACACACAGTGACTGTGCCGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp CTGGTGCTGCGGCGTGCATGTGCGGCCCGAGAGCGTGGCTTCGGGTCTACCAGAGGCCTGGAGGGGTCTTaGCTCCCTTGTAGTCACTTG +
Preference number: 2 (lower is better)
Translates to: LVLRRACAARERGFGSTRGLEGS*LPCSHL
Trigger: CAAGTGACTACAAGGGAGGCAAGACCCCTCCAGGCC...TCTGGTAGACCCGAAGCCACGCTCTCGGGCCGCACATGCACGCCGCAGCACCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp AGGGCTAGACTTGGATGTGGCTCCGTCCCCACCCATGTGCCACCATCACTGGGCGCCCCTCACAAGACCTaGAGGCTGCGCTCATGCCCG +
Preference number: 2 (lower is better)
Translates to: RARLGCGSVPTHVPPSLGAPHKT*RLRSCP
Trigger: CGGGCATGAGCGCAGCCTGCAGGTCTTGTGAGGGGC...GCCCAGTGATGGTGGCACATGGGTGGGGACGGAGCCACATCCAAGTCTAGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495936.6
3UTR-3UTR CCA 90 bp GCACGGCACAGTCACTGTGTGTGGTGGGACCCAGTGTCGGCTGAGAGGCCTGGAATGGGCAGGTCCCGCTaGAGCCTCTTCACCGTGTCC +
Preference number: 2 (lower is better)
Translates to: ARHSHCVWWDPVSAERPGMGRSR*SLFTVS
Trigger: GGACACGGTGAAGAGGCTCCAGCGGGACCTGCCCAT...TCCAGGCCTCTCAGCCGACACTGGGTCCCACCACACACAGTGACTGTGCCGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp GCCCTGGCGTGCACCTGCACCCACTCAAACGCCGAAGCCTTCGTGTCATCACTGGCTTGGAGCCCCTCCTaGCCCAGGACTGATGGGCAG +
Preference number: 2 (lower is better)
Translates to: ALACTCTHSNAEAFVSSLAWSPS*PRTDGQ
Trigger: CTGCCCATCAGTCCTGGGCCAGGAGGGGCTCCAAGC...CAGTGATGACACGAAGGCTTCGGCGTTTGAGTGGGTGCAGGTGCACGCCAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp ACAGTCACTGTGTGTGGTGGGACCCAGTGTCGGCTGAGAGGCCTGGAGGGGTCTGCTTGGAGCCCCTCCTaGCCCAGGACTGATGGGCAG +
Preference number: 2 (lower is better)
Translates to: TVTVCGGTQCRLRGLEGSAWSPS*PRTDGQ
Trigger: CTGCCCATCAGTCCTGGGCCAGGAGGGGCTCCAAGC...AGACCCCTCCAGGCCTCTCAGCCGACACTGGGTCCCACCACACACAGTGACTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp GCACGGCACAGTCACTGTGTGTGGTGGGACCCAGTGTCGGCTGAGAGGCCTGGAGGAAGCACCAAGCCCTaGCGTGCACCTGCACCCACT +
Preference number: 2 (lower is better)
Translates to: ARHSHCVWWDPVSAERPGGSTKP*RAPAPT
Trigger: AGTGGGTGCAGGTGCACGCCAGGGCTTGGTGCTTCC...TCCAGGCCTCTCAGCCGACACTGGGTCCCACCACACACAGTGACTGTGCCGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp ACAGTCACTGTGTGTGGTGGGACCCAGTGTCGGCTGAGAGGCCTGGAGGGGTCTCCCTCTGAGTCCGTGTaGCCAGGGCTCTGGCTGGGA +
Preference number: 2 (lower is better)
Translates to: TVTVCGGTQCRLRGLEGSPSESV*PGLWLG
Trigger: TCCCAGCCAGAGCCCTGGCCACACGGACTCAGAGGG...AGACCCCTCCAGGCCTCTCAGCCGACACTGGGTCCCACCACACACAGTGACTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR CAA 90 bp GCCTCCCTTGTAGTCACTTGGTGTCATAACAAGGAGGGCACTCATTaGGCCTGGGCCGGCCCCTGGCCCCACTATCCACAGGCCAGGCCC +
Preference number: 2 (lower is better)
Translates to: ASLVVTWCHNKEGTH*AWAGPWPHYPQARP
Trigger: GGGCCTGGCCTGTGGATAGTGGGGCCAGGGGCCGGCCCAGGCCAAATGAGTGCCCTCCTTGTTATGACACCAAGTGACTACAAGGGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR TCA 90 bp GGCACAGTCACTGTGTGTGGTGGGACCCAGTGTCGGCTGAGAGGCCTGGAGGGGGGGGCAATCCTTCTCTaGACGCAAAACCCTGCCCTG +
Preference number: 2 (lower is better)
Translates to: GTVTVCGGTQCRLRGLEGGAILL*TQNPAL
Trigger: CAGGGCAGGGTTTTGCGTTCAGAGAAGGATTGCCCC...CCCCTCCAGGCCTCTCAGCCGACACTGGGTCCCACCACACACAGTGACTGTGCC
63% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR TCA 90 bp AAGGAAAAGGCCAGAACCTGCACTGCACGGCACAGTCACTGTGTGTGGTGGGACACATCCCCCAGGGCCTaGCCCCACTGCCGAGGGCTG +
Preference number: 2 (lower is better)
Translates to: KEKARTCTARHSHCVWWDTSPRA*PHCRGL
Trigger: CAGCCCTCGGCAGTGGGGTCAGGCCCTGGGGGATGT...GTCCCACCACACACAGTGACTGTGCCGTGCAGTGCAGGTTCTGGCCTTTTCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR TCA 90 bp CACGGCACAGTCACTGTGTGTGGTGGGACCCAGTGTCGGCTGAGAGGCCTGGAGGCCCAAGGGAGTGGCTaGGTCAGCCTTAGAGGCCAT +
Preference number: 2 (lower is better)
Translates to: HGTVTVCGGTQCRLRGLEAQGSG*VSLRGH
Trigger: ATGGCCTCTAAGGCTGACTCAGCCACTCCCTTGGGC...CTCCAGGCCTCTCAGCCGACACTGGGTCCCACCACACACAGTGACTGTGCCGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp AAGACCCACGGCGACACCTTACCCAACCAGGATGGGGCTGGAGAAGGCCACGCCGCCATCTCAGCTCACTaGAAGCTCTGCCTCCCGGGT +
Preference number: 2 (lower is better)
Translates to: KTHGDTLPNQDGAGEGHAAISAH*KLCLPG
Trigger: ACCCGGGAGGCAGAGCTTGCAGTGAGCTGAGATGGC...GGCGTGGCCTTCTCCAGCCCCATCCTGGTTGGGTAAGGTGTCGCCGTGGGTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp CTCAGCACCCATGAAGTCCACCACGGGTCTCTGGGGCAATCCTTCTCTGAACGCACTCCCCCGGACCGCTaGGTGCTGCTTGGAGCCCCT +
Preference number: 2 (lower is better)
Translates to: LSTHEVHHGSLGQSFSERTPPDR*VLLGAP
Trigger: AGGGGCTCCAAGCAGCACCCAGCGGTCCGGGGGAGT...GCGTTCAGAGAAGGATTGCCCCAGAGACCCGTGGTGGACTTCATGGGTGCTGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp GGCCCCACCAGGGCTCTGCAGCATCTGAGGCAAAAAGTCTTGGGCCGGACGAGGCGCTCAGCCACCCTCTaGGGCTGCCCCTTCTTTTGT +
Preference number: 2 (lower is better)
Translates to: GPTRALQHLRQKVLGRTRRSATL*GCPFFC
Trigger: ACAAAAGAAGGGGCAGCCCCAGAGGGTGGCTGAGCG...CCTCGTCCGGCCCAAGACTTTTTGCCTCAGATGCTGCAGAGCCCTGGTGGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR TCA 90 bp GCACGGCACAGTCACTGTGTGTGGTGGGACCCAGTGTCGGCTGAGAGGCCTGGAGGGGCAATCCTTCTCTaGACGCAAAACCCTGCCCTG +
Preference number: 2 (lower is better)
Translates to: ARHSHCVWWDPVSAERPGGAILL*TQNPAL
Trigger: CAGGGCAGGGTTTTGCGTTCAGAGAAGGATTGCCCC...TCCAGGCCTCTCAGCCGACACTGGGTCCCACCACACACAGTGACTGTGCCGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR TCA 90 bp GCTACAGGTTGGCAGGTTCTACATGGGTTTCGGCTCCTGTGTGGGCCTTGCCCTGCTCCTGTCTTCCCCTaGAGCCAGGCCACCCAGCTC +
Preference number: 2 (lower is better)
Translates to: ATGWQVLHGFRLLCGPCPAPVFP*SQATQL
Trigger: GAGCTGGGTGGCCTGGCTTCAGGGGAAGACAGGAGC...AGGGCAAGGCCCACACAGGAGCCGAAACCCATGTAGAACCTGCCAACCTGTAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR TCA 90 bp ATCCAGGGCAGCTGTTTTAAAAACCCGCACACAGGACAGTGGCTGTCTCTGCCGACATCCCCCAGGGCCTaGCCCCACTGCCGAGGGCTG +
Preference number: 2 (lower is better)
Translates to: IQGSCFKNPHTGQWLSLPTSPRA*PHCRGL
Trigger: CAGCCCTCGGCAGTGGGGTCAGGCCCTGGGGGATGT...CGGCAGAGACAGCCACTGTCCTGTGTGCGGGTTTTTAAAACAGCTGCCCTGGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR TCA 90 bp GGGCAGCCTGGCTTCTCAGGATTGGCAGAACCAAGGCACTGCCCTAGACGCTTTGAGGACACTGGCCAGTaGCCAGCGACAGGAGGCCAG +
Preference number: 2 (lower is better)
Translates to: GQPGFSGLAEPRHCPRRFEDTGQ*PATGGQ
Trigger: CTGGCCTCCTGTCGCTGGTCACTGGCCAGTGTCCTC...AAAGCGTCTAGGGCAGTGCCTTGGTTCTGCCAATCCTGAGAAGCCAGGCTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp AGCGTGGCTTCGGGTCTACCAGATGCCTTCAAGGAAAAGGCCAGAACCTGCACTCGGACCGCTGGGTGCTaGTTGGAGCCCCTCCTGGCC +
Preference number: 2 (lower is better)
Translates to: SVASGLPDAFKEKARTCTRTAGC*LEPLLA
Trigger: GGCCAGGAGGGGCTCCAAGCAGCACCCAGCGGTCCG...AGTGCAGGTTCTGGCCTTTTCCTTGAAGGCATCTGGTAGACCCGAAGCCACGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp GCACCCATGAAGTCCACCACGGGTCTCTGGGGCAATCCTTCTCTGAACGCAAAACGGACCGCTGGGTGCTaGTTGGAGCCCCTCCTGGCC +
Preference number: 2 (lower is better)
Translates to: APMKSTTGLWGNPSLNAKRTAGC*LEPLLA
Trigger: GGCCAGGAGGGGCTCCAAGCAGCACCCAGCGGTCCG...TTTTGCGTTCAGAGAAGGATTGCCCCAGAGACCCGTGGTGGACTTCATGGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp GCACGGCACAGTCACTGTGTGTGGTGGGACCCAGTGTCGGCTGAGAGGCCTGGACTGAACGCAAAACCCTaGCCTGGCTCTCCCAGGTCT +
Preference number: 2 (lower is better)
Translates to: ARHSHCVWWDPVSAERPGLNAKP*PGSPRS
Trigger: AGACCTGGGAGAGCCAGGGCAGGGTTTTGCGTTCAG...TCCAGGCCTCTCAGCCGACACTGGGTCCCACCACACACAGTGACTGTGCCGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp AAGGGAGTGGCTGAGTCAGCCTTAGAGGCCATTCTGTGGCCGAGAGCTGGAGGCGCCCTGGCGTGCACCTaGACCCACTCAAACGCCGAA +
Preference number: 2 (lower is better)
Translates to: KGVAESALEAILWPRAGGALACT*THSNAE
Trigger: TTCGGCGTTTGAGTGGGTGCAGGTGCACGCCAGGGC...GCCTCCAGCTCTCGGCCACAGAATGGCCTCTAAGGCTGACTCAGCCACTCCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp AGGGCTAGACTTGGATGTGGCTCCGTCCCCACCCATGTGCCACCATCACTGGGCCACCAAGCCCTGGCGTaGACCTGCACCCACTCAAAC +
Preference number: 2 (lower is better)
Translates to: RARLGCGSVPTHVPPSLGHQALA*TCTHSN
Trigger: GTTTGAGTGGGTGCAGGTGCACGCCAGGGCTTGGTG...GCCCAGTGATGGTGGCACATGGGTGGGGACGGAGCCACATCCAAGTCTAGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp ACAGTCACTGTGTGTGGTGGGACCCAGTGTCGGCTGAGAGGCCTGGAGGGGTCTCACCAAGCCCTGGCGTaGACCTGCACCCACTCAAAC +
Preference number: 2 (lower is better)
Translates to: TVTVCGGTQCRLRGLEGSHQALA*TCTHSN
Trigger: GTTTGAGTGGGTGCAGGTGCACGCCAGGGCTTGGTG...AGACCCCTCCAGGCCTCTCAGCCGACACTGGGTCCCACCACACACAGTGACTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp AAGACCCACGGCGACACCTTACCCAACCAGGATGGGGCTGGAGAAGGCCACGCCCTCAGCAGACCAGGCTaGCCACTCTCATGCTCTTGG +
Preference number: 2 (lower is better)
Translates to: KTHGDTLPNQDGAGEGHALSRPG*PLSCSW
Trigger: CCAAGAGCATGAGAGTGGGCAGCCTGGTCTGCTGAG...GGCGTGGCCTTCTCCAGCCCCATCCTGGTTGGGTAAGGTGTCGCCGTGGGTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp AGGTTTCCTCTCCCGGCCACCATGGCCCTACCAATGGTCACTGCTATTCCCACAAGGAGGGCACTCATTTaGCCTGGGCCGGCCCCTGGC +
Preference number: 2 (lower is better)
Translates to: RFPLPATMALPMVTAIPTRRALI*PGPAPG
Trigger: GCCAGGGGCCGGCCCAGGCCAAATGAGTGCCCTCCT...TGTGGGAATAGCAGTGACCATTGGTAGGGCCATGGTGGCCGGGAGAGGAAACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp CTGGCCAGTGACCAGCGACAGGAGGCCAGAGGGCGCTCCAGGAGTTTTTCAGGCGTGAGCCACCACACCTaGTCTGGAGCCCTCTGTTCT +
Preference number: 2 (lower is better)
Translates to: LASDQRQEARGRSRSFSGVSHHT*SGALCS
Trigger: AGAACAGAGGGCTCCAGACCAGGTGTGGTGGCTCAC...GCCTGAAAAACTCCTGGAGCGCCCTCTGGCCTCCTGTCGCTGGTCACTGGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp GGCCCCACCAGGGCTCTGCAGCATCTGAGGCAAAAAGTCTTGGGCCGGACGAGGGTGAGCCACCACACCTaGTCTGGAGCCCTCTGTTCT +
Preference number: 2 (lower is better)
Translates to: GPTRALQHLRQKVLGRTRVSHHT*SGALCS
Trigger: AGAACAGAGGGCTCCAGACCAGGTGTGGTGGCTCAC...CCTCGTCCGGCCCAAGACTTTTTGCCTCAGATGCTGCAGAGCCCTGGTGGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp AAGACCCACGGCGACACCTTACCCAACCAGGATGGGGCTGGAGAAGGCCACGCCTGCCTCCCGAGCAGCTaGGATTACAGGCGTGTGTCA +
Preference number: 2 (lower is better)
Translates to: KTHGDTLPNQDGAGEGHACLPSS*DYRRVS
Trigger: TGACACACGCCTGTAATCCCAGCTGCTCGGGAGGCA...GGCGTGGCCTTCTCCAGCCCCATCCTGGTTGGGTAAGGTGTCGCCGTGGGTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp AAGACCCACGGCGACACCTTACCCAACCAGGATGGGGCTGGAGAAGGCCACGCCGCGTCGATGATCTGCTaGGTGTGGAGTGGGTCCTTC +
Preference number: 2 (lower is better)
Translates to: KTHGDTLPNQDGAGEGHAASMIC*VWSGSF
Trigger: GAAGGACCCACTCCACACCCAGCAGATCATCGACGC...GGCGTGGCCTTCTCCAGCCCCATCCTGGTTGGGTAAGGTGTCGCCGTGGGTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp AAGACCCACGGCGACACCTTACCCAACCAGGATGGGGCTGGAGAAGGCCACGCCAGCCTCCCCAGTAGCTaGAACTACAGGCGTGTGCCA +
Preference number: 2 (lower is better)
Translates to: KTHGDTLPNQDGAGEGHASLPSS*NYRRVP
Trigger: TGGCACACGCCTGTAGTTCCAGCTACTGGGGAGGCT...GGCGTGGCCTTCTCCAGCCCCATCCTGGTTGGGTAAGGTGTCGCCGTGGGTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR TCA 90 bp GGCACAGTCACTGTGTGTGGTGGGACCCAGTGTCGGCTGAGAGGCCTGGAGGGGCAAAATGTCTGCATCTaGCAAATCCCCGCCTCTGCG +
Preference number: 2 (lower is better)
Translates to: GTVTVCGGTQCRLRGLEGQNVCI*QIPASA
Trigger: CGCAGAGGCGGGGATTTGTCAGATGCAGACATTTTG...CCCCTCCAGGCCTCTCAGCCGACACTGGGTCCCACCACACACAGTGACTGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR TCA 90 bp GACAAGGCATGGCTGACTCTCCAGGTTACAGCTGGAGAAGAGGGGAAAGGTGTTCACGCATGCCGGGTCTaGGACTCCCCCGGACCGCTG +
Preference number: 2 (lower is better)
Translates to: DKAWLTLQVTAGEEGKGVHACRV*DSPGPL
Trigger: CAGCGGTCCGGGGGAGTCTCAGACCCGGCATGCGTG...AACACCTTTCCCCTCTTCTCCAGCTGTAACCTGGAGAGTCAGCCATGCCTTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR TCA 90 bp AGGTTTCCTCTCCCGGCCACCATGGCCCTACCAATGGTCACTGCTATTCCCACAGGACCCAGTGTCGGCTaGGAGGCCTGGAGGGGTCTT +
Preference number: 2 (lower is better)
Translates to: RFPLPATMALPMVTAIPTGPSVG*EAWRGL
Trigger: AAGACCCCTCCAGGCCTCTCAGCCGACACTGGGTCC...TGTGGGAATAGCAGTGACCATTGGTAGGGCCATGGTGGCCGGGAGAGGAAACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp GTTCCACAGTCTGGGGAGTGTGGTACTGCGTGGGCAGGGGCACAGATGGTCCAGCTGAACGCAAAACCCTaGCCTGGCTCTCCCAGGTCT +
Preference number: 2 (lower is better)
Translates to: VPQSGECGTAWAGAQMVQLNAKP*PGSPRS
Trigger: AGACCTGGGAGAGCCAGGGCAGGGTTTTGCGTTCAG...CTGGACCATCTGTGCCCCTGCCCACGCAGTACCACACTCCCCAGACTGTGGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp CGTCCCCACCCATGTGCCACCATCACTGGGCACTTAATACCTGCCTGGATGCTGGCCCTGGCGTGCACCTaGACCCACTCAAACGCCGAA +
Preference number: 2 (lower is better)
Translates to: RPHPCATITGHLIPAWMLALACT*THSNAE
Trigger: TTCGGCGTTTGAGTGGGTGCAGGTGCACGCCAGGGC...CAGCATCCAGGCAGGTATTAAGTGCCCAGTGATGGTGGCACATGGGTGGGGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp GCTACAGGTTGGCAGGTTCTACATGGGTTTCGGCTCCTGTGTGGGCCTTGCCCTCCGGCCTGGCCAGGCTaGCCACCATTGGAAACATCC +
Preference number: 2 (lower is better)
Translates to: ATGWQVLHGFRLLCGPCPPAWPG*PPLETS
Trigger: GGATGTTTCCAATGGTGGGCAGCCTGGCCAGGCCGG...AGGGCAAGGCCCACACAGGAGCCGAAACCCATGTAGAACCTGCCAACCTGTAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp GACAAGGCATGGCTGACTCTCCAGGTTACAGCTGGAGAAGAGGGGAAAGGTGTTCAGGGCAGCTGGTGCTaGGGCGTGCATGTGCGGCCC +
Preference number: 2 (lower is better)
Translates to: DKAWLTLQVTAGEEGKGVQGSWC*GVHVRP
Trigger: GGGCCGCACATGCACGCCGCAGCACCAGCTGCCCTG...AACACCTTTCCCCTCTTCTCCAGCTGTAACCTGGAGAGTCAGCCATGCCTTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp CTGGCCAGTGACCAGCGACAGGAGGCCAGAGGGCGCTCCAGGAGTTTTTCAGGCACGATCTCAGCTCACTaGAACCTCTGCCTCCTGCGT +
Preference number: 2 (lower is better)
Translates to: LASDQRQEARGRSRSFSGTISAH*NLCLLR
Trigger: ACGCAGGAGGCAGAGGTTGCAGTGAGCTGAGATCGT...GCCTGAAAAACTCCTGGAGCGCCCTCTGGCCTCCTGTCGCTGGTCACTGGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp CTGGCCAGTGACCAGCGACAGGAGGCCAGAGGGCGCTCCAGGAGTTTTTCAGGCAGATGGCACTGGAGATaGGTTCCACAGTCTGGGGAG +
Preference number: 2 (lower is better)
Translates to: LASDQRQEARGRSRSFSGRWHWR*VPQSGE
Trigger: CTCCCCAGACTGTGGAACGCATCTCCAGTGCCATCT...GCCTGAAAAACTCCTGGAGCGCCCTCTGGCCTCCTGTCGCTGGTCACTGGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp AAGGGAGTGGCTGAGTCAGCCTTAGAGGCCATTCTGTGGCCGAGAGCTGGAGGCGCCAAGGAACCAGCCTaGCTTTGCCCCCAACGCTCT +
Preference number: 2 (lower is better)
Translates to: KGVAESALEAILWPRAGGAKEPA*LCPQRS
Trigger: AGAGCGTTGGGGGCAAAGCCAGGCTGGTTCCTTGGC...GCCTCCAGCTCTCGGCCACAGAATGGCCTCTAAGGCTGACTCAGCCACTCCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp CTCAGCACCCATGAAGTCCACCACGGGTCTCTGGGGCAATCCTTCTCTGAACGCATGGGCAGGTCCCGCTaGAGCCTCTTCACCGTGTCC +
Preference number: 2 (lower is better)
Translates to: LSTHEVHHGSLGQSFSERMGRSR*SLFTVS
Trigger: GGACACGGTGAAGAGGCTCCAGCGGGACCTGCCCAT...GCGTTCAGAGAAGGATTGCCCCAGAGACCCGTGGTGGACTTCATGGGTGCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp CTTAACTTCGGCTCCCTGGTCAACTCACTTGGAGCAAGAGCACAGAGCCCGGCTGCTTGGAGCCCCTCCTaGCCCAGGACTGATGGGCAG +
Preference number: 2 (lower is better)
Translates to: LNFGSLVNSLGARAQSPAAWSPS*PRTDGQ
Trigger: CTGCCCATCAGTCCTGGGCCAGGAGGGGCTCCAAGC...AGCCGGGCTCTGTGCTCTTGCTCCAAGTGAGTTGACCAGGGAGCCGAAGTTAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp CACGGCACAGTCACTGTGTGTGGTGGGACCCAGTGTCGGCTGAGAGGCCTGGAGTCCACCACGGGTCTCTaGGGCAATCCTTCTCTGAAC +
Preference number: 2 (lower is better)
Translates to: HGTVTVCGGTQCRLRGLESTTGL*GNPSLN
Trigger: GTTCAGAGAAGGATTGCCCCAGAGACCCGTGGTGGA...CTCCAGGCCTCTCAGCCGACACTGGGTCCCACCACACACAGTGACTGTGCCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp AAGGAAAAGGCCAGAACCTGCACTGCACGGCACAGTCACTGTGTGTGGTGGGACCCCTCTGAGTCCGTGTaGCCAGGGCTCTGGCTGGGA +
Preference number: 2 (lower is better)
Translates to: KEKARTCTARHSHCVWWDPSESV*PGLWLG
Trigger: TCCCAGCCAGAGCCCTGGCCACACGGACTCAGAGGG...GTCCCACCACACACAGTGACTGTGCCGTGCAGTGCAGGTTCTGGCCTTTTCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp CGTCCCCACCCATGTGCCACCATCACTGGGCACTTAATACCTGCCTGGATGCTGTGCGGCCCGAGAGCGTaGCTTCGGGTCTACCAGATG +
Preference number: 2 (lower is better)
Translates to: RPHPCATITGHLIPAWMLCGPRA*LRVYQM
Trigger: CATCTGGTAGACCCGAAGCCACGCTCTCGGGCCGCA...CAGCATCCAGGCAGGTATTAAGTGCCCAGTGATGGTGGCACATGGGTGGGGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR TCA 90 bp CACGGCACAGTCACTGTGTGTGGTGGGACCCAGTGTCGGCTGAGAGGCCTGGAGCAAAATGTCTGCATCTaGCAAATCCCCGCCTCTGCG +
Preference number: 2 (lower is better)
Translates to: HGTVTVCGGTQCRLRGLEQNVCI*QIPASA
Trigger: CGCAGAGGCGGGGATTTGTCAGATGCAGACATTTTG...CTCCAGGCCTCTCAGCCGACACTGGGTCCCACCACACACAGTGACTGTGCCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR TCA 90 bp ATCCAGGGCAGCTGTTTTAAAAACCCGCACACAGGACAGTGGCTGTCTCTGCCGCCCAAAGTGCTGGGATaGCAGGCGTGCCCCACCTCG +
Preference number: 2 (lower is better)
Translates to: IQGSCFKNPHTGQWLSLPPKVLG*QACPTS
Trigger: CGAGGTGGGGCACGCCTGTCATCCCAGCACTTTGGG...CGGCAGAGACAGCCACTGTCCTGTGTGCGGGTTTTTAAAACAGCTGCCCTGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp CACCGTGTCCCCGACCCAGGAAACCCCGAGGCCAAGGAACCAGCCTGGCTTTGCACTACCCGGCAGCCTTaGAAAATGTCTGCATCTGAC +
Preference number: 2 (lower is better)
Translates to: HRVPDPGNPEAKEPAWLCTTRQP*KMSASD
Trigger: GTCAGATGCAGACATTTTGCAAGGCTGCCGGGTAGT...GCAAAGCCAGGCTGGTTCCTTGGCCTCGGGGTTTCCTGGGTCGGGGACACGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp GAGTCACTGCGCCCGGCCCCAGTGACTATTTATGAGAACAAAAGACAAGGCATGCCCCGGACCGCTGGGTaGTGCTTGGAGCCCCTCCTG +
Preference number: 2 (lower is better)
Translates to: ESLRPAPVTIYENKRQGMPRTAG*CLEPLL
Trigger: CAGGAGGGGCTCCAAGCAGCACCCAGCGGTCCGGGG...CATGCCTTGTCTTTTGTTCTCATAAATAGTCACTGGGGCCGGGCGCAGTGACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp CTAAAGAGCTGGGAACAGCTTCAGAGTCAGGCTCAGCCTGACTCATGCTTGACACCCCGGACCGCTGGGTaGTGCTTGGAGCCCCTCCTG +
Preference number: 2 (lower is better)
Translates to: LKSWEQLQSQAQPDSCLTPRTAG*CLEPLL
Trigger: CAGGAGGGGCTCCAAGCAGCACCCAGCGGTCCGGGG...TGTCAAGCATGAGTCAGGCTGAGCCTGACTCTGAAGCTGTTCCCAGCTCTTTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp AGGGCAGCTGTTTTAAAAACCCGCACACAGGACAGTGGCTGTCTCTGCCGCACGGCCCTGGCGTGCACCTaGACCCACTCAAACGCCGAA +
Preference number: 2 (lower is better)
Translates to: RAAVLKTRTQDSGCLCRTALACT*THSNAE
Trigger: TTCGGCGTTTGAGTGGGTGCAGGTGCACGCCAGGGC...CGTGCGGCAGAGACAGCCACTGTCCTGTGTGCGGGTTTTTAAAACAGCTGCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp GGGCAGCCTGGCTTCTCAGGATTGGCAGAACCAAGGCACTGCCCTAGACGCTTTCACCAAGCCCTGGCGTaGACCTGCACCCACTCAAAC +
Preference number: 2 (lower is better)
Translates to: GQPGFSGLAEPRHCPRRFHQALA*TCTHSN
Trigger: GTTTGAGTGGGTGCAGGTGCACGCCAGGGCTTGGTG...AAAGCGTCTAGGGCAGTGCCTTGGTTCTGCCAATCCTGAGAAGCCAGGCTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp CTCAGCACGGAAAACTGCATGTCAGGGTCTCTGTTCTCTGCTGCAGCCACATTTGCTGGTGCTGCGGCGTaGATGTGCGGCCCGAGAGCG +
Preference number: 2 (lower is better)
Translates to: LSTENCMSGSLFSAAATFAGAAA*MCGPRA
Trigger: CGCTCTCGGGCCGCACATGCACGCCGCAGCACCAGC...AAATGTGGCTGCAGCAGAGAACAGAGACCCTGACATGCAGTTTTCCGTGCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp AAAGACAAGGCATGGCTGACTCTCCAGGTTACAGCTGGAGAAGAGGGGAAAGGTCAGGGCAGCTGGTGCTaGGGCGTGCATGTGCGGCCC +
Preference number: 2 (lower is better)
Translates to: KDKAWLTLQVTAGEEGKGQGSWC*GVHVRP
Trigger: GGGCCGCACATGCACGCCGCAGCACCAGCTGCCCTG...ACCTTTCCCCTCTTCTCCAGCTGTAACCTGGAGAGTCAGCCATGCCTTGTCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp AGGGCAGCTGTTTTAAAAACCCGCACACAGGACAGTGGCTGTCTCTGCCGCACGATAGGCGTGAGCCACTaGGCCCGGCCACTAGCACAG +
Preference number: 2 (lower is better)
Translates to: RAAVLKTRTQDSGCLCRTIGVSH*ARPLAQ
Trigger: CTGTGCTAGTGGCCGGGCGCAGTGGCTCACGCCTAT...CGTGCGGCAGAGACAGCCACTGTCCTGTGTGCGGGTTTTTAAAACAGCTGCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp ATCCAGGGCAGCTGTTTTAAAAACCCGCACACAGGACAGTGGCTGTCTCTGCCGGCCAGAGTAAGGGCCTaGTGCCTCTCCCAGCCGTGG +
Preference number: 2 (lower is better)
Translates to: IQGSCFKNPHTGQWLSLPARVRA*CLSQPW
Trigger: CCACGGCTGGGAGAGGCAGCAGGCCCTTACTCTGGC...CGGCAGAGACAGCCACTGTCCTGTGTGCGGGTTTTTAAAACAGCTGCCCTGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp AAGACCCACGGCGACACCTTACCCAACCAGGATGGGGCTGGAGAAGGCCACGCCGCACCAGGAAGACTGTaGTCCAAATTAGGATGGGCC +
Preference number: 2 (lower is better)
Translates to: KTHGDTLPNQDGAGEGHAAPGRL*SKLGWA
Trigger: GGCCCATCCTAATTTGGAGCACAGTCTTCCTGGTGC...GGCGTGGCCTTCTCCAGCCCCATCCTGGTTGGGTAAGGTGTCGCCGTGGGTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp CTTAACTTCGGCTCCCTGGTCAACTCACTTGGAGCAAGAGCACAGAGCCCGGCTGGCTGGGCTGGCCCCTaGAGGATGCTCCAACATCTG +
Preference number: 2 (lower is better)
Translates to: LNFGSLVNSLGARAQSPAGWAGP*RMLQHL
Trigger: CAGATGTTGGAGCATCCTGCAGGGGCCAGCCCAGCC...AGCCGGGCTCTGTGCTCTTGCTCCAAGTGAGTTGACCAGGGAGCCGAAGTTAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp GCCCTGGCGTGCACCTGCACCCACTCAAACGCCGAAGCCTTCGTGTCATCACTGTCCACCACGGGTCTCTaGGGCAATCCTTCTCTGAAC +
Preference number: 2 (lower is better)
Translates to: ALACTCTHSNAEAFVSSLSTTGL*GNPSLN
Trigger: GTTCAGAGAAGGATTGCCCCAGAGACCCGTGGTGGA...CAGTGATGACACGAAGGCTTCGGCGTTTGAGTGGGTGCAGGTGCACGCCAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp AGGGCAGCTGTTTTAAAAACCCGCACACAGGACAGTGGCTGTCTCTGCCGCACGGGAAGCACCAAGCCCTaGCGTGCACCTGCACCCACT +
Preference number: 2 (lower is better)
Translates to: RAAVLKTRTQDSGCLCRTGSTKP*RAPAPT
Trigger: AGTGGGTGCAGGTGCACGCCAGGGCTTGGTGCTTCC...CGTGCGGCAGAGACAGCCACTGTCCTGTGTGCGGGTTTTTAAAACAGCTGCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp AAAGACAAGGCATGGCTGACTCTCCAGGTTACAGCTGGAGAAGAGGGGAAAGGTGGCACTCATTTGGCCTaGGCCGGCCCCTGGCCCCAC +
Preference number: 2 (lower is better)
Translates to: KDKAWLTLQVTAGEEGKGGTHLA*AGPWPH
Trigger: GTGGGGCCAGGGGCCGGCCCAGGCCAAATGAGTGCC...ACCTTTCCCCTCTTCTCCAGCTGTAACCTGGAGAGTCAGCCATGCCTTGTCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp AGGTTTCCTCTCCCGGCCACCATGGCCCTACCAATGGTCACTGCTATTCCCACATGCGGCCCGAGAGCGTaGCTTCGGGTCTACCAGATG +
Preference number: 2 (lower is better)
Translates to: RFPLPATMALPMVTAIPTCGPRA*LRVYQM
Trigger: CATCTGGTAGACCCGAAGCCACGCTCTCGGGCCGCA...TGTGGGAATAGCAGTGACCATTGGTAGGGCCATGGTGGCCGGGAGAGGAAACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp AAGACCCACGGCGACACCTTACCCAACCAGGATGGGGCTGGAGAAGGCCACGCCACGCTTTCCATGGAGTaGTGCCAGTTGCTTGGCACA +
Preference number: 2 (lower is better)
Translates to: KTHGDTLPNQDGAGEGHATLSME*CQLLGT
Trigger: TGTGCCAAGCAACTGGCACCACTCCATGGAAAGCGT...GGCGTGGCCTTCTCCAGCCCCATCCTGGTTGGGTAAGGTGTCGCCGTGGGTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR CAA 90 bp GCCCCAGGAGCCACCGCCTGCAGGGTAACATCTGCTTACCGGTGTTaGGGGTGGCCATTTCCGCATCCATCAGACACTTTCCTCAGCAGA +
Preference number: 2 (lower is better)
Translates to: APGATACRVTSAYRC*GWPFPHPSDTFLSR
Trigger: TCTGCTGAGGAAAGTGTCTGATGGATGCGGAAATGGCCACCCCAAACACCGGTAAGCAGATGTTACCCTGCAGGCGGTGGCTCCTGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR TCA 90 bp CTGCGCCCGGCCACTAGCACAGTTATAGTTCACTGCAGCCTCTACTTCCCAGGCGGGGCAATCCTTCTCTaGACGCAAAACCCTGCCCTG +
Preference number: 2 (lower is better)
Translates to: LRPATSTVIVHCSLYFPGGAILL*TQNPAL
Trigger: CAGGGCAGGGTTTTGCGTTCAGAGAAGGATTGCCCC...GCCTGGGAAGTAGAGGCTGCAGTGAACTATAACTGTGCTAGTGGCCGGGCGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR TCA 90 bp AGGGCAGCTGTTTTAAAAACCCGCACACAGGACAGTGGCTGTCTCTGCCGCACGGCCACTCAGCACCCATaGAGTCCACCACGGGTCTCT +
Preference number: 2 (lower is better)
Translates to: RAAVLKTRTQDSGCLCRTATQHP*SPPRVS
Trigger: AGAGACCCGTGGTGGACTTCATGGGTGCTGAGTGGC...CGTGCGGCAGAGACAGCCACTGTCCTGTGTGCGGGTTTTTAAAACAGCTGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR TCA 90 bp CTTAACTTCGGCTCCCTGGTCAACTCACTTGGAGCAAGAGCACAGAGCCCGGCTGCCACTCAGCACCCATaGAGTCCACCACGGGTCTCT +
Preference number: 2 (lower is better)
Translates to: LNFGSLVNSLGARAQSPAATQHP*SPPRVS
Trigger: AGAGACCCGTGGTGGACTTCATGGGTGCTGAGTGGC...AGCCGGGCTCTGTGCTCTTGCTCCAAGTGAGTTGACCAGGGAGCCGAAGTTAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR TCA 90 bp GGCCCCACCAGGGCTCTGCAGCATCTGAGGCAAAAAGTCTTGGGCCGGACGAGGTGCGCCCGGCCCCAGTaGCTATTTATGAGAACAAAA +
Preference number: 2 (lower is better)
Translates to: GPTRALQHLRQKVLGRTRCARPQ*LFMRTK
Trigger: TTTTGTTCTCATAAATAGTCACTGGGGCCGGGCGCA...CCTCGTCCGGCCCAAGACTTTTTGCCTCAGATGCTGCAGAGCCCTGGTGGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR TCA 90 bp GGGCAGCCTGGCTTCTCAGGATTGGCAGAACCAAGGCACTGCCCTAGACGCTTTCGGCGTGTCTGGACATaGGTACCCTGCCTCCATTCT +
Preference number: 2 (lower is better)
Translates to: GQPGFSGLAEPRHCPRRFRRVWT*VPCLHS
Trigger: AGAATGGAGGCAGGGTACTCATGTCCAGACACGCCG...AAAGCGTCTAGGGCAGTGCCTTGGTTCTGCCAATCCTGAGAAGCCAGGCTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR TCA 90 bp AAGACCCACGGCGACACCTTACCCAACCAGGATGGGGCTGGAGAAGGCCACGCCGGCAGAAGAATTGCTTaGACCTGGGAAGTGGAGGTT +
Preference number: 2 (lower is better)
Translates to: KTHGDTLPNQDGAGEGHAGRRIA*TWEVEV
Trigger: AACCTCCACTTCCCAGGTTCAAGCAATTCTTCTGCC...GGCGTGGCCTTCTCCAGCCCCATCCTGGTTGGGTAAGGTGTCGCCGTGGGTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp GCACGGCACAGTCACTGTGTGTGGTGGGACCCAGTGTCGGCTGAGAGGCCTGGAACTACCCGGCAGCCTTaGAAAATGTCTGCATCTGAC +
Preference number: 2 (lower is better)
Translates to: ARHSHCVWWDPVSAERPGTTRQP*KMSASD
Trigger: GTCAGATGCAGACATTTTGCAAGGCTGCCGGGTAGT...TCCAGGCCTCTCAGCCGACACTGGGTCCCACCACACACAGTGACTGTGCCGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp TCAGGCTTACGTGGTCTGGTCCTCAGCAGACCCTTCCTAGAAGACACGAAAACAAGAGCCCCCGCCTCCTaGTGCCACAGCCCAAGGGAG +
Preference number: 2 (lower is better)
Translates to: SGLRGLVLSRPFLEDTKTRAPAS*CHSPRE
Trigger: CTCCCTTGGGCTGTGGCAGCAGGAGGCGGGGGCTCT...TGTTTTCGTGTCTTCTAGGAAGGGTCTGCTGAGGACCAGACCACGTAAGCCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp GAGTCACTGCGCCCGGCCCCAGTGACTATTTATGAGAACAAAAGACAAGGCATGAGAGCCCCCGCCTCCTaGTGCCACAGCCCAAGGGAG +
Preference number: 2 (lower is better)
Translates to: ESLRPAPVTIYENKRQGMRAPAS*CHSPRE
Trigger: CTCCCTTGGGCTGTGGCAGCAGGAGGCGGGGGCTCT...CATGCCTTGTCTTTTGTTCTCATAAATAGTCACTGGGGCCGGGCGCAGTGACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp CCCGAGAGCGTGGCTTCGGGTCTACCAGATGCCTTCAAGGAAAAGGCCAGAACCGGCCTGGAGGGGTCTTaGCTCCCTTGTAGTCACTTG +
Preference number: 2 (lower is better)
Translates to: PESVASGLPDAFKEKARTGLEGS*LPCSHL
Trigger: CAAGTGACTACAAGGGAGGCAAGACCCCTCCAGGCC...GGTTCTGGCCTTTTCCTTGAAGGCATCTGGTAGACCCGAAGCCACGCTCTCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp CTCAGCACGGAAAACTGCATGTCAGGGTCTCTGTTCTCTGCTGCAGCCACATTTGCTGCGGCGTGCATGTaGGGCCCGAGAGCGTGGCTT +
Preference number: 2 (lower is better)
Translates to: LSTENCMSGSLFSAAATFAAACM*GPRAWL
Trigger: AAGCCACGCTCTCGGGCCGCACATGCACGCCGCAGC...AAATGTGGCTGCAGCAGAGAACAGAGACCCTGACATGCAGTTTTCCGTGCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp AGGGCAGCTGTTTTAAAAACCCGCACACAGGACAGTGGCTGTCTCTGCCGCACGCCAGGCCAAGAGCTCTaGCTGGGGACCAGGTACAGT +
Preference number: 2 (lower is better)
Translates to: RAAVLKTRTQDSGCLCRTPGQEL*LGTRYS
Trigger: ACTGTACCTGGTCCCCAGGCAGAGCTCTTGGCCTGG...CGTGCGGCAGAGACAGCCACTGTCCTGTGTGCGGGTTTTTAAAACAGCTGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp GGGCAGCCTGGCTTCTCAGGATTGGCAGAACCAAGGCACTGCCCTAGACGCTTTCCTCATCGCCCATGCTaGCCTTCAAGGCGTTTCTGC +
Preference number: 2 (lower is better)
Translates to: GQPGFSGLAEPRHCPRRFPHRPC*PSRRFC
Trigger: GCAGAAACGCCTTGAAGGGCAGCATGGGCGATGAGG...AAAGCGTCTAGGGCAGTGCCTTGGTTCTGCCAATCCTGAGAAGCCAGGCTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp GATTGGCAGAACCAAGGCACTGCCCTAGACGCTTTCCATGGAGTGGTGCCAGTTGGACCCACCTGTTCCTaGTGCCCCACAGGGACTTGG +
Preference number: 2 (lower is better)
Translates to: DWQNQGTALDAFHGVVPVGPTCS*CPTGTW
Trigger: CCAAGTCCCTGTGGGGCAGCAGGAACAGGTGGGTCC...AACTGGCACCACTCCATGGAAAGCGTCTAGGGCAGTGCCTTGGTTCTGCCAATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp GCACCCATGAAGTCCACCACGGGTCTCTGGGGCAATCCTTCTCTGAACGCAAAAATGGGCAGGTCCCGCTaGAGCCTCTTCACCGTGTCC +
Preference number: 2 (lower is better)
Translates to: APMKSTTGLWGNPSLNAKMGRSR*SLFTVS
Trigger: GGACACGGTGAAGAGGCTCCAGCGGGACCTGCCCAT...TTTTGCGTTCAGAGAAGGATTGCCCCAGAGACCCGTGGTGGACTTCATGGGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp AGCGTGGCTTCGGGTCTACCAGATGCCTTCAAGGAAAAGGCCAGAACCTGCACTATGGGCAGGTCCCGCTaGAGCCTCTTCACCGTGTCC +
Preference number: 2 (lower is better)
Translates to: SVASGLPDAFKEKARTCTMGRSR*SLFTVS
Trigger: GGACACGGTGAAGAGGCTCCAGCGGGACCTGCCCAT...AGTGCAGGTTCTGGCCTTTTCCTTGAAGGCATCTGGTAGACCCGAAGCCACGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp CTCAGCACGGAAAACTGCATGTCAGGGTCTCTGTTCTCTGCTGCAGCCACATTTTCTGTGGCCGAGAGCTaGAGGCCAGTGGCTGCGGGG +
Preference number: 2 (lower is better)
Translates to: LSTENCMSGSLFSAAATFSVAES*RPVAAG
Trigger: CCCCGCAGCCACTGGCCTCCAGCTCTCGGCCACAGA...AAATGTGGCTGCAGCAGAGAACAGAGACCCTGACATGCAGTTTTCCGTGCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp CCCGAGAGCGTGGCTTCGGGTCTACCAGATGCCTTCAAGGAAAAGGCCAGAACCCACAGTCACTGTGTGTaGTGGGACCCAGTGTCGGCT +
Preference number: 2 (lower is better)
Translates to: PESVASGLPDAFKEKARTHSHCV*WDPVSA
Trigger: AGCCGACACTGGGTCCCACCACACACAGTGACTGTG...GGTTCTGGCCTTTTCCTTGAAGGCATCTGGTAGACCCGAAGCCACGCTCTCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp AGGGCAGCTGTTTTAAAAACCCGCACACAGGACAGTGGCTGTCTCTGCCGCACGCTCTCCCGGCCACCATaGCCCTACCAATGGTCACTG +
Preference number: 2 (lower is better)
Translates to: RAAVLKTRTQDSGCLCRTLSRPP*PYQWSL
Trigger: CAGTGACCATTGGTAGGGCCATGGTGGCCGGGAGAG...CGTGCGGCAGAGACAGCCACTGTCCTGTGTGCGGGTTTTTAAAACAGCTGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp CTTAACTTCGGCTCCCTGGTCAACTCACTTGGAGCAAGAGCACAGAGCCCGGCTTCTCCCCACAGGCTCTaGGGTGACCCTGAGGTTTCC +
Preference number: 2 (lower is better)
Translates to: LNFGSLVNSLGARAQSPASPHRL*GDPEVS
Trigger: GGAAACCTCAGGGTCACCCCAGAGCCTGTGGGGAGA...AGCCGGGCTCTGTGCTCTTGCTCCAAGTGAGTTGACCAGGGAGCCGAAGTTAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp GGGCAGCCTGGCTTCTCAGGATTGGCAGAACCAAGGCACTGCCCTAGACGCTTTACTCCAGCTCTGGCCTaGGCAATAGAGCCCAACCCT +
Preference number: 2 (lower is better)
Translates to: GQPGFSGLAEPRHCPRRFTPALA*AIEPNP
Trigger: AGGGTTGGGCTCTATTGCCCAGGCCAGAGCTGGAGT...AAAGCGTCTAGGGCAGTGCCTTGGTTCTGCCAATCCTGAGAAGCCAGGCTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp CTTAACTTCGGCTCCCTGGTCAACTCACTTGGAGCAAGAGCACAGAGCCCGGCTCTTTCTCGAGGCTTGTaGGCTTGCTGGCCTGGGGCT +
Preference number: 2 (lower is better)
Translates to: LNFGSLVNSLGARAQSPALSRGL*ACWPGA
Trigger: AGCCCCAGGCCAGCAAGCCCACAAGCCTCGAGAAAG...AGCCGGGCTCTGTGCTCTTGCTCCAAGTGAGTTGACCAGGGAGCCGAAGTTAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR TCA 90 bp CACCGTGTCCCCGACCCAGGAAACCCCGAGGCCAAGGAACCAGCCTGGCTTTGCAACACAGTCCCTCATTaGACCAAACGGTTCTATCTC +
Preference number: 2 (lower is better)
Translates to: HRVPDPGNPEAKEPAWLCNTVPH*TKRFYL
Trigger: GAGATAGAACCGTTTGGTTCAATGAGGGACTGTGTT...GCAAAGCCAGGCTGGTTCCTTGGCCTCGGGGTTTCCTGGGTCGGGGACACGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR TCA 90 bp AGGTTTCCTCTCCCGGCCACCATGGCCCTACCAATGGTCACTGCTATTCCCACAGGGGCAATCCTTCTCTaGACGCAAAACCCTGCCCTG +
Preference number: 2 (lower is better)
Translates to: RFPLPATMALPMVTAIPTGAILL*TQNPAL
Trigger: CAGGGCAGGGTTTTGCGTTCAGAGAAGGATTGCCCC...TGTGGGAATAGCAGTGACCATTGGTAGGGCCATGGTGGCCGGGAGAGGAAACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR TCA 90 bp AAGGGAGTGGCTGAGTCAGCCTTAGAGGCCATTCTGTGGCCGAGAGCTGGAGGCTCTGATAGATGCCCGTaGACATGTCTTCTCCGGCCT +
Preference number: 2 (lower is better)
Translates to: KGVAESALEAILWPRAGGSDRCP*TCLLRP
Trigger: AGGCCGGAGAAGACATGTTCACGGGCATCTATCAGA...GCCTCCAGCTCTCGGCCACAGAATGGCCTCTAAGGCTGACTCAGCCACTCCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR TCA 90 bp GATTGGCAGAACCAAGGCACTGCCCTAGACGCTTTCCATGGAGTGGTGCCAGTTGCCCAAGGGAGTGGCTaGGTCAGCCTTAGAGGCCAT +
Preference number: 2 (lower is better)
Translates to: DWQNQGTALDAFHGVVPVAQGSG*VSLRGH
Trigger: ATGGCCTCTAAGGCTGACTCAGCCACTCCCTTGGGC...AACTGGCACCACTCCATGGAAAGCGTCTAGGGCAGTGCCTTGGTTCTGCCAATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR TCA 90 bp CTAAAGAGCTGGGAACAGCTTCAGAGTCAGGCTCAGCCTGACTCATGCTTGACAGGACCCAGTGTCGGCTaGGAGGCCTGGAGGGGTCTT +
Preference number: 2 (lower is better)
Translates to: LKSWEQLQSQAQPDSCLTGPSVG*EAWRGL
Trigger: AAGACCCCTCCAGGCCTCTCAGCCGACACTGGGTCC...TGTCAAGCATGAGTCAGGCTGAGCCTGACTCTGAAGCTGTTCCCAGCTCTTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR TCA 90 bp AGGTTTCCTCTCCCGGCCACCATGGCCCTACCAATGGTCACTGCTATTCCCACACTTGCCTCAGCCTCCTaGGTAGCTGGGACTACAGGT +
Preference number: 2 (lower is better)
Translates to: RFPLPATMALPMVTAIPTLASAS*VAGTTG
Trigger: ACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAAG...TGTGGGAATAGCAGTGACCATTGGTAGGGCCATGGTGGCCGGGAGAGGAAACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR TCA 90 bp AGGGCAGCTGTTTTAAAAACCCGCACACAGGACAGTGGCTGTCTCTGCCGCACGGCCAGCCTGTCTTCTTaGCCCAAAGCCACTCCTTGG +
Preference number: 2 (lower is better)
Translates to: RAAVLKTRTQDSGCLCRTASLSS*PKATPW
Trigger: CCAAGGAGTGGCTTTGGGTCAAGAAGACAGGCTGGC...CGTGCGGCAGAGACAGCCACTGTCCTGTGTGCGGGTTTTTAAAACAGCTGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR TCA 90 bp AGGTTTCCTCTCCCGGCCACCATGGCCCTACCAATGGTCACTGCTATTCCCACAGCCAGCCTGTCTTCTTaGCCCAAAGCCACTCCTTGG +
Preference number: 2 (lower is better)
Translates to: RFPLPATMALPMVTAIPTASLSS*PKATPW
Trigger: CCAAGGAGTGGCTTTGGGTCAAGAAGACAGGCTGGC...TGTGGGAATAGCAGTGACCATTGGTAGGGCCATGGTGGCCGGGAGAGGAAACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR TCA 90 bp ACATCTGCTTACCGGTGTTTGGGGTGGCCATTTCCGCATCCATCAGACACTTTCGGCTCCCGGGCAAACTaGGGCAGAGGCCCCTGTTCT +
Preference number: 2 (lower is better)
Translates to: TSAYRCLGWPFPHPSDTFGSRAN*GRGPCS
Trigger: AGAACAGGGGCCTCTGCCTCAGTTTGCCCGGGAGCC...GAAAGTGTCTGATGGATGCGGAAATGGCCACCCCAAACACCGGTAAGCAGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR TCA 90 bp ATCCAGGGCAGCTGTTTTAAAAACCCGCACACAGGACAGTGGCTGTCTCTGCCGGGTAAGGGCTGCAGCTaGGTCAGGATCCACTCAGGC +
Preference number: 2 (lower is better)
Translates to: IQGSCFKNPHTGQWLSLPGKGCS*VRIHSG
Trigger: GCCTGAGTGGATCCTGACTCAGCTGCAGCCCTTACC...CGGCAGAGACAGCCACTGTCCTGTGTGCGGGTTTTTAAAACAGCTGCCCTGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR TCA 90 bp GTCCTTCCATGCTGGCCCTTCCAGCACTCCTGCAGAGCACACTTTAGGAAACTCCAAGCAAGGGGATGGTaGGGCATGGGACTGGGACAC +
Preference number: 2 (lower is better)
Translates to: VLPCWPFQHSCRAHFRKLQARGW*GMGLGH
Trigger: GTGTCCCAGTCCCATGCCTCACCATCCCCTTGCTTG...GAGTTTCCTAAAGTGTGCTCTGCAGGAGTGCTGGAAGGGCCAGCATGGAAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp GTTCCACAGTCTGGGGAGTGTGGTACTGCGTGGGCAGGGGCACAGATGGTCCAGAGGGTCTCTGTTCTCTaGTGCAGCCACATTTCCAGA +
Preference number: 2 (lower is better)
Translates to: VPQSGECGTAWAGAQMVQRVSVL*CSHISR
Trigger: TCTGGAAATGTGGCTGCAGCAGAGAACAGAGACCCT...CTGGACCATCTGTGCCCCTGCCCACGCAGTACCACACTCCCCAGACTGTGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp GTTCCACAGTCTGGGGAGTGTGGTACTGCGTGGGCAGGGGCACAGATGGTCCAGCTCAGCACGGAAAACTaGATGTCAGGGTCTCTGTTC +
Preference number: 2 (lower is better)
Translates to: VPQSGECGTAWAGAQMVQLSTEN*MSGSLF
Trigger: GAACAGAGACCCTGACATGCAGTTTTCCGTGCTGAG...CTGGACCATCTGTGCCCCTGCCCACGCAGTACCACACTCCCCAGACTGTGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp CTAAAGAGCTGGGAACAGCTTCAGAGTCAGGCTCAGCCTGACTCATGCTTGACATCCGGCCCCCGGGGATaGCACAACTTTCTCGTGGGG +
Preference number: 2 (lower is better)
Translates to: LKSWEQLQSQAQPDSCLTSGPRG*HNFLVG
Trigger: CCCCACGAGAAAGTTGTGGCATCCCCGGGGGCCGGA...TGTCAAGCATGAGTCAGGCTGAGCCTGACTCTGAAGCTGTTCCCAGCTCTTTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp GGGCAGCCTGGCTTCTCAGGATTGGCAGAACCAAGGCACTGCCCTAGACGCTTTTTGTCCAGGCTGGAGTaGAGTGGCACGATCTCAGCT +
Preference number: 2 (lower is better)
Translates to: GQPGFSGLAEPRHCPRRFLSRLE*SGTISA
Trigger: AGCTGAGATCGTGCCACTGCACTCCAGCCTGGACAA...AAAGCGTCTAGGGCAGTGCCTTGGTTCTGCCAATCCTGAGAAGCCAGGCTGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp ATCCAGGGCAGCTGTTTTAAAAACCCGCACACAGGACAGTGGCTGTCTCTGCCGTGGGGAGTGTGGTACTaGGTGGGCAGGGGCACAGAT +
Preference number: 2 (lower is better)
Translates to: IQGSCFKNPHTGQWLSLPWGVWY*VGRGTD
Trigger: ATCTGTGCCCCTGCCCACGCAGTACCACACTCCCCA...CGGCAGAGACAGCCACTGTCCTGTGTGCGGGTTTTTAAAACAGCTGCCCTGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp GGCCCCACCAGGGCTCTGCAGCATCTGAGGCAAAAAGTCTTGGGCCGGACGAGGACCGAATTTCTAGGCTaGAATGGCATTCCTCATCGC +
Preference number: 2 (lower is better)
Translates to: GPTRALQHLRQKVLGRTRTEFLG*NGIPHR
Trigger: GCGATGAGGAATGCCATTGCAGCCTAGAAATTCGGT...CCTCGTCCGGCCCAAGACTTTTTGCCTCAGATGCTGCAGAGCCCTGGTGGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp AGCCGCTTCAGAAAGATGTTCAGGAAACACCGTTGCCTGTTTGCTCAGAGTGGCCGAGGCTTGTGGGCTTaGTGGCCTGGGGCTCGGTAC +
Preference number: 2 (lower is better)
Translates to: SRFRKMFRKHRCLFAQSGRGLWA*WPGARY
Trigger: GTACCGAGCCCCAGGCCAGCAAGCCCACAAGCCTCG...GCCACTCTGAGCAAACAGGCAACGGTGTTTCCTGAACATCTTTCTGAAGCGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp GTCCTTCCATGCTGGCCCTTCCAGCACTCCTGCAGAGCACACTTTAGGAAACTCGCCCAAATAGGGAAGTaGCCGCTCCAAGGGCGGCTT +
Preference number: 2 (lower is better)
Translates to: VLPCWPFQHSCRAHFRKLAQIGK*PLQGRL
Trigger: AAGCCGCCCTTGGAGCGGGCACTTCCCTATTTGGGC...GAGTTTCCTAAAGTGTGCTCTGCAGGAGTGCTGGAAGGGCCAGCATGGAAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp CTTAACTTCGGCTCCCTGGTCAACTCACTTGGAGCAAGAGCACAGAGCCCGGCTCCAGGAGCCACCGCCTaGAGGGTAACATCTGCTTAC +
Preference number: 2 (lower is better)
Translates to: LNFGSLVNSLGARAQSPAPGATA*RVTSAY
Trigger: GTAAGCAGATGTTACCCTGCAGGCGGTGGCTCCTGG...AGCCGGGCTCTGTGCTCTTGCTCCAAGTGAGTTGACCAGGGAGCCGAAGTTAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp AGCGTGGCTTCGGGTCTACCAGATGCCTTCAAGGAAAAGGCCAGAACCTGCACTGCCAAGGAACCAGCCTaGCTTTGCCCCCAACGCTCT +
Preference number: 2 (lower is better)
Translates to: SVASGLPDAFKEKARTCTAKEPA*LCPQRS
Trigger: AGAGCGTTGGGGGCAAAGCCAGGCTGGTTCCTTGGC...AGTGCAGGTTCTGGCCTTTTCCTTGAAGGCATCTGGTAGACCCGAAGCCACGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp AAAGACAAGGCATGGCTGACTCTCCAGGTTACAGCTGGAGAAGAGGGGAAAGGTGCTTGGAGCCCCTCCTaGCCCAGGACTGATGGGCAG +
Preference number: 2 (lower is better)
Translates to: KDKAWLTLQVTAGEEGKGAWSPS*PRTDGQ
Trigger: CTGCCCATCAGTCCTGGGCCAGGAGGGGCTCCAAGC...ACCTTTCCCCTCTTCTCCAGCTGTAACCTGGAGAGTCAGCCATGCCTTGTCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp TCAGGCTTACGTGGTCTGGTCCTCAGCAGACCCTTCCTAGAAGACACGAAAACAGCTTGGAGCCCCTCCTaGCCCAGGACTGATGGGCAG +
Preference number: 2 (lower is better)
Translates to: SGLRGLVLSRPFLEDTKTAWSPS*PRTDGQ
Trigger: CTGCCCATCAGTCCTGGGCCAGGAGGGGCTCCAAGC...TGTTTTCGTGTCTTCTAGGAAGGGTCTGCTGAGGACCAGACCACGTAAGCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp CCCGAGAGCGTGGCTTCGGGTCTACCAGATGCCTTCAAGGAAAAGGCCAGAACCTCCACCACGGGTCTCTaGGGCAATCCTTCTCTGAAC +
Preference number: 2 (lower is better)
Translates to: PESVASGLPDAFKEKARTSTTGL*GNPSLN
Trigger: GTTCAGAGAAGGATTGCCCCAGAGACCCGTGGTGGA...GGTTCTGGCCTTTTCCTTGAAGGCATCTGGTAGACCCGAAGCCACGCTCTCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp GACAAGGCATGGCTGACTCTCCAGGTTACAGCTGGAGAAGAGGGGAAAGGTGTTGGAAGCACCAAGCCCTaGCGTGCACCTGCACCCACT +
Preference number: 2 (lower is better)
Translates to: DKAWLTLQVTAGEEGKGVGSTKP*RAPAPT
Trigger: AGTGGGTGCAGGTGCACGCCAGGGCTTGGTGCTTCC...AACACCTTTCCCCTCTTCTCCAGCTGTAACCTGGAGAGTCAGCCATGCCTTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp CTAAAGAGCTGGGAACAGCTTCAGAGTCAGGCTCAGCCTGACTCATGCTTGACACCCTCTGAGTCCGTGTaGCCAGGGCTCTGGCTGGGA +
Preference number: 2 (lower is better)
Translates to: LKSWEQLQSQAQPDSCLTPSESV*PGLWLG
Trigger: TCCCAGCCAGAGCCCTGGCCACACGGACTCAGAGGG...TGTCAAGCATGAGTCAGGCTGAGCCTGACTCTGAAGCTGTTCCCAGCTCTTTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp CTTAACTTCGGCTCCCTGGTCAACTCACTTGGAGCAAGAGCACAGAGCCCGGCTTTAGAGGCCATTCTGTaGCCGAGAGCTGGAGGCCAG +
Preference number: 2 (lower is better)
Translates to: LNFGSLVNSLGARAQSPALEAIL*PRAGGQ
Trigger: CTGGCCTCCAGCTCTCGGCCACAGAATGGCCTCTAA...AGCCGGGCTCTGTGCTCTTGCTCCAAGTGAGTTGACCAGGGAGCCGAAGTTAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp AGGTTTCCTCTCCCGGCCACCATGGCCCTACCAATGGTCACTGCTATTCCCACATTAGAGGCCATTCTGTaGCCGAGAGCTGGAGGCCAG +
Preference number: 2 (lower is better)
Translates to: RFPLPATMALPMVTAIPTLEAIL*PRAGGQ
Trigger: CTGGCCTCCAGCTCTCGGCCACAGAATGGCCTCTAA...TGTGGGAATAGCAGTGACCATTGGTAGGGCCATGGTGGCCGGGAGAGGAAACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp AAAGGCTGGAGCTGGGAGAACGAGAACCCTAGGAGAAAGAGAACAAGAAATTCCGGCACTCATTTGGCCTaGGCCGGCCCCTGGCCCCAC +
Preference number: 2 (lower is better)
Translates to: KGWSWENENPRRKRTRNSGTHLA*AGPWPH
Trigger: GTGGGGCCAGGGGCCGGCCCAGGCCAAATGAGTGCC...GGAATTTCTTGTTCTCTTTCTCCTAGGGTTCTCGTTCTCCCAGCTCCAGCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp GTCCTTCCATGCTGGCCCTTCCAGCACTCCTGCAGAGCACACTTTAGGAAACTCGAGTGTGGTACTGCGTaGGCAGGGGCACAGATGGTC +
Preference number: 2 (lower is better)
Translates to: VLPCWPFQHSCRAHFRKLECGTA*AGAQMV
Trigger: GACCATCTGTGCCCCTGCCCACGCAGTACCACACTC...GAGTTTCCTAAAGTGTGCTCTGCAGGAGTGCTGGAAGGGCCAGCATGGAAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp GCTACAGGTTGGCAGGTTCTACATGGGTTTCGGCTCCTGTGTGGGCCTTGCCCTATGCGTTCCACAGTCTaGGGAGTGTGGTACTGCGTG +
Preference number: 2 (lower is better)
Translates to: ATGWQVLHGFRLLCGPCPMRSTV*GVWYCV
Trigger: CACGCAGTACCACACTCCCCAGACTGTGGAACGCAT...AGGGCAAGGCCCACACAGGAGCCGAAACCCATGTAGAACCTGCCAACCTGTAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp AGGGCAGCTGTTTTAAAAACCCGCACACAGGACAGTGGCTGTCTCTGCCGCACGGCCCCCAGATGGCACTaGAGATGCGTTCCACAGTCT +
Preference number: 2 (lower is better)
Translates to: RAAVLKTRTQDSGCLCRTAPRWH*RCVPQS
Trigger: AGACTGTGGAACGCATCTCCAGTGCCATCTGGGGGC...CGTGCGGCAGAGACAGCCACTGTCCTGTGTGCGGGTTTTTAAAACAGCTGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp GTCCTTCCATGCTGGCCCTTCCAGCACTCCTGCAGAGCACACTTTAGGAAACTCTCTCCCCACAGGCTCTaGGGTGACCCTGAGGTTTCC +
Preference number: 2 (lower is better)
Translates to: VLPCWPFQHSCRAHFRKLSPHRL*GDPEVS
Trigger: GGAAACCTCAGGGTCACCCCAGAGCCTGTGGGGAGA...GAGTTTCCTAAAGTGTGCTCTGCAGGAGTGCTGGAAGGGCCAGCATGGAAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp AAGACCCACGGCGACACCTTACCCAACCAGGATGGGGCTGGAGAAGGCCACGCCCCCTTCTTTTGTTTCTaGAAAGAGAGGGCCCTGTCT +
Preference number: 2 (lower is better)
Translates to: KTHGDTLPNQDGAGEGHAPFFCF*KERALS
Trigger: AGACAGGGCCCTCTCTTTCCAGAAACAAAAGAAGGG...GGCGTGGCCTTCTCCAGCCCCATCCTGGTTGGGTAAGGTGTCGCCGTGGGTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp GTCCTTCCATGCTGGCCCTTCCAGCACTCCTGCAGAGCACACTTTAGGAAACTCCAACCAGGATGGGGCTaGAGAAGGCCACGCCAGGAT +
Preference number: 2 (lower is better)
Translates to: VLPCWPFQHSCRAHFRKLQPGWG*RRPRQD
Trigger: ATCCTGGCGTGGCCTTCTCCAGCCCCATCCTGGTTG...GAGTTTCCTAAAGTGTGCTCTGCAGGAGTGCTGGAAGGGCCAGCATGGAAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR CAA 90 bp GCTGACATCCCTCAGCCGCTTCAGAAAGATGTTCAGGAAACACCGTaGCCTGTTTGCTCAGAGTGGCAGGTGGTGAGGCCGAGTCTGGTC +
Preference number: 2 (lower is better)
Translates to: ADIPQPLQKDVQETP*PVCSEWQVVRPSLV
Trigger: GACCAGACTCGGCCTCACCACCTGCCACTCTGAGCAAACAGGCAACGGTGTTTCCTGAACATCTTTCTGAAGCGGCTGAGGGATGTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR TCA 90 bp GATTGGCAGAACCAAGGCACTGCCCTAGACGCTTTCCATGGAGTGGTGCCAGTTAGGAGGAGGTTGCAGTaGGCCAAGATCATGCCACCG +
Preference number: 2 (lower is better)
Translates to: DWQNQGTALDAFHGVVPVRRRLQ*AKIMPP
Trigger: CGGTGGCATGATCTTGGCTCACTGCAACCTCCTCCT...AACTGGCACCACTCCATGGAAAGCGTCTAGGGCAGTGCCTTGGTTCTGCCAATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR TCA 90 bp GTCCTTCCATGCTGGCCCTTCCAGCACTCCTGCAGAGCACACTTTAGGAAACTCGGGCTCTGCAGCATCTaGGGCAAAAAGTCTTGGGCC +
Preference number: 2 (lower is better)
Translates to: VLPCWPFQHSCRAHFRKLGLCSI*GKKSWA
Trigger: GGCCCAAGACTTTTTGCCTCAGATGCTGCAGAGCCC...GAGTTTCCTAAAGTGTGCTCTGCAGGAGTGCTGGAAGGGCCAGCATGGAAGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp CTGCTGCCACAGCCCAAGGGAGTGGCTGAGTCAGCCTTAGAGGCCATTCTGTGGACTACCCGGCAGCCTTaGAAAATGTCTGCATCTGAC +
Preference number: 2 (lower is better)
Translates to: LLPQPKGVAESALEAILWTTRQP*KMSASD
Trigger: GTCAGATGCAGACATTTTGCAAGGCTGCCGGGTAGT...CCACAGAATGGCCTCTAAGGCTGACTCAGCCACTCCCTTGGGCTGTGGCAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp AGCGTGGCTTCGGGTCTACCAGATGCCTTCAAGGAAAAGGCCAGAACCTGCACTCTGAACGCAAAACCCTaGCCTGGCTCTCCCAGGTCT +
Preference number: 2 (lower is better)
Translates to: SVASGLPDAFKEKARTCTLNAKP*PGSPRS
Trigger: AGACCTGGGAGAGCCAGGGCAGGGTTTTGCGTTCAG...AGTGCAGGTTCTGGCCTTTTCCTTGAAGGCATCTGGTAGACCCGAAGCCACGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp CTCAGCACGGAAAACTGCATGTCAGGGTCTCTGTTCTCTGCTGCAGCCACATTTGCCCTGGCGTGCACCTaGACCCACTCAAACGCCGAA +
Preference number: 2 (lower is better)
Translates to: LSTENCMSGSLFSAAATFALACT*THSNAE
Trigger: TTCGGCGTTTGAGTGGGTGCAGGTGCACGCCAGGGC...AAATGTGGCTGCAGCAGAGAACAGAGACCCTGACATGCAGTTTTCCGTGCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp AAAGACAAGGCATGGCTGACTCTCCAGGTTACAGCTGGAGAAGAGGGGAAAGGTCCGGCCTGGCCAGGCTaGCCACCATTGGAAACATCC +
Preference number: 2 (lower is better)
Translates to: KDKAWLTLQVTAGEEGKGPAWPG*PPLETS
Trigger: GGATGTTTCCAATGGTGGGCAGCCTGGCCAGGCCGG...ACCTTTCCCCTCTTCTCCAGCTGTAACCTGGAGAGTCAGCCATGCCTTGTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp AGCGTGGCTTCGGGTCTACCAGATGCCTTCAAGGAAAAGGCCAGAACCTGCACTGGCCTGGAGGGGTCTTaGCTCCCTTGTAGTCACTTG +
Preference number: 2 (lower is better)
Translates to: SVASGLPDAFKEKARTCTGLEGS*LPCSHL
Trigger: CAAGTGACTACAAGGGAGGCAAGACCCCTCCAGGCC...AGTGCAGGTTCTGGCCTTTTCCTTGAAGGCATCTGGTAGACCCGAAGCCACGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp AGGGCTAGACTTGGATGTGGCTCCGTCCCCACCCATGTGCCACCATCACTGGGCGGCGTTTCTACAGGCTaGAGGAAAGTACATACATGC +
Preference number: 2 (lower is better)
Translates to: RARLGCGSVPTHVPPSLGGVSTG*RKVHTC
Trigger: GCATGTATGTACTTTCCTGCAGCCTGTAGAAACGCC...GCCCAGTGATGGTGGCACATGGGTGGGGACGGAGCCACATCCAAGTCTAGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp AAGACCCACGGCGACACCTTACCCAACCAGGATGGGGCTGGAGAAGGCCACGCCCAATGGTTTGCCTCATaGCTCGAAACTAGAAAGGCT +
Preference number: 2 (lower is better)
Translates to: KTHGDTLPNQDGAGEGHAQWFAS*LETRKA
Trigger: AGCCTTTCTAGTTTCGAGGCATGAGGCAAACCATTG...GGCGTGGCCTTCTCCAGCCCCATCCTGGTTGGGTAAGGTGTCGCCGTGGGTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp ATCCAGGGCAGCTGTTTTAAAAACCCGCACACAGGACAGTGGCTGTCTCTGCCGCCTCATCGCCCATGCTaGCCTTCAAGGCGTTTCTGC +
Preference number: 2 (lower is better)
Translates to: IQGSCFKNPHTGQWLSLPPHRPC*PSRRFC
Trigger: GCAGAAACGCCTTGAAGGGCAGCATGGGCGATGAGG...CGGCAGAGACAGCCACTGTCCTGTGTGCGGGTTTTTAAAACAGCTGCCCTGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp GCTACAGGTTGGCAGGTTCTACATGGGTTTCGGCTCCTGTGTGGGCCTTGCCCTCCAAGATCACACCATTaGAGTCCAGCCTGGACGACA +
Preference number: 2 (lower is better)
Translates to: ATGWQVLHGFRLLCGPCPPRSHH*SPAWTT
Trigger: TGTCGTCCAGGCTGGACTGCAATGGTGTGATCTTGG...AGGGCAAGGCCCACACAGGAGCCGAAACCCATGTAGAACCTGCCAACCTGTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp GAGTCACTGCGCCCGGCCCCAGTGACTATTTATGAGAACAAAAGACAAGGCATGATGGGCAGGTCCCGCTaGAGCCTCTTCACCGTGTCC +
Preference number: 2 (lower is better)
Translates to: ESLRPAPVTIYENKRQGMMGRSR*SLFTVS
Trigger: GGACACGGTGAAGAGGCTCCAGCGGGACCTGCCCAT...CATGCCTTGTCTTTTGTTCTCATAAATAGTCACTGGGGCCGGGCGCAGTGACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp AAAGGCTGGAGCTGGGAGAACGAGAACCCTAGGAGAAAGAGAACAAGAAATTCCACTCCCCCGGACCGCTaGGTGCTGCTTGGAGCCCCT +
Preference number: 2 (lower is better)
Translates to: KGWSWENENPRRKRTRNSTPPDR*VLLGAP
Trigger: AGGGGCTCCAAGCAGCACCCAGCGGTCCGGGGGAGT...GGAATTTCTTGTTCTCTTTCTCCTAGGGTTCTCGTTCTCCCAGCTCCAGCCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp AAGGAAAAGGCCAGAACCTGCACTGCACGGCACAGTCACTGTGTGTGGTGGGACTCCACCACGGGTCTCTaGGGCAATCCTTCTCTGAAC +
Preference number: 2 (lower is better)
Translates to: KEKARTCTARHSHCVWWDSTTGL*GNPSLN
Trigger: GTTCAGAGAAGGATTGCCCCAGAGACCCGTGGTGGA...GTCCCACCACACACAGTGACTGTGCCGTGCAGTGCAGGTTCTGGCCTTTTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp AAAGACAAGGCATGGCTGACTCTCCAGGTTACAGCTGGAGAAGAGGGGAAAGGTGGAAGCACCAAGCCCTaGCGTGCACCTGCACCCACT +
Preference number: 2 (lower is better)
Translates to: KDKAWLTLQVTAGEEGKGGSTKP*RAPAPT
Trigger: AGTGGGTGCAGGTGCACGCCAGGGCTTGGTGCTTCC...ACCTTTCCCCTCTTCTCCAGCTGTAACCTGGAGAGTCAGCCATGCCTTGTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp GTCCTTCCATGCTGGCCCTTCCAGCACTCCTGCAGAGCACACTTTAGGAAACTCCACAGTCACTGTGTGTaGTGGGACCCAGTGTCGGCT +
Preference number: 2 (lower is better)
Translates to: VLPCWPFQHSCRAHFRKLHSHCV*WDPVSA
Trigger: AGCCGACACTGGGTCCCACCACACACAGTGACTGTG...GAGTTTCCTAAAGTGTGCTCTGCAGGAGTGCTGGAAGGGCCAGCATGGAAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp AGCGTGGCTTCGGGTCTACCAGATGCCTTCAAGGAAAAGGCCAGAACCTGCACTCACAGTCACTGTGTGTaGTGGGACCCAGTGTCGGCT +
Preference number: 2 (lower is better)
Translates to: SVASGLPDAFKEKARTCTHSHCV*WDPVSA
Trigger: AGCCGACACTGGGTCCCACCACACACAGTGACTGTG...AGTGCAGGTTCTGGCCTTTTCCTTGAAGGCATCTGGTAGACCCGAAGCCACGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp GAGTCACTGCGCCCGGCCCCAGTGACTATTTATGAGAACAAAAGACAAGGCATGTGCGGCCCGAGAGCGTaGCTTCGGGTCTACCAGATG +
Preference number: 2 (lower is better)
Translates to: ESLRPAPVTIYENKRQGMCGPRA*LRVYQM
Trigger: CATCTGGTAGACCCGAAGCCACGCTCTCGGGCCGCA...CATGCCTTGTCTTTTGTTCTCATAAATAGTCACTGGGGCCGGGCGCAGTGACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp AGCCGCTTCAGAAAGATGTTCAGGAAACACCGTTGCCTGTTTGCTCAGAGTGGCACAGTCTGGGGAGTGTaGTACTGCGTGGGCAGGGGC +
Preference number: 2 (lower is better)
Translates to: SRFRKMFRKHRCLFAQSGTVWGV*YCVGRG
Trigger: GCCCCTGCCCACGCAGTACCACACTCCCCAGACTGT...GCCACTCTGAGCAAACAGGCAACGGTGTTTCCTGAACATCTTTCTGAAGCGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp GTCCTTCCATGCTGGCCCTTCCAGCACTCCTGCAGAGCACACTTTAGGAAACTCCAGGCTTACGTGGTCTaGTCCTCAGCAGACCCTTCC +
Preference number: 2 (lower is better)
Translates to: VLPCWPFQHSCRAHFRKLQAYVV*SSADPS
Trigger: GGAAGGGTCTGCTGAGGACCAGACCACGTAAGCCTG...GAGTTTCCTAAAGTGTGCTCTGCAGGAGTGCTGGAAGGGCCAGCATGGAAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp CTAAAGAGCTGGGAACAGCTTCAGAGTCAGGCTCAGCCTGACTCATGCTTGACAAGCCTGGGAGGACACTaGCCAGTGACCAGCGACAGG +
Preference number: 2 (lower is better)
Translates to: LKSWEQLQSQAQPDSCLTSLGGH*PVTSDR
Trigger: CCTGTCGCTGGTCACTGGCCAGTGTCCTCCCAGGCT...TGTCAAGCATGAGTCAGGCTGAGCCTGACTCTGAAGCTGTTCCCAGCTCTTTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp AGCCGCTTCAGAAAGATGTTCAGGAAACACCGTTGCCTGTTTGCTCAGAGTGGCAGCCTGGGAGGACACTaGCCAGTGACCAGCGACAGG +
Preference number: 2 (lower is better)
Translates to: SRFRKMFRKHRCLFAQSGSLGGH*PVTSDR
Trigger: CCTGTCGCTGGTCACTGGCCAGTGTCCTCCCAGGCT...GCCACTCTGAGCAAACAGGCAACGGTGTTTCCTGAACATCTTTCTGAAGCGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp ACATCTGCTTACCGGTGTTTGGGGTGGCCATTTCCGCATCCATCAGACACTTTCATCCCACAGTACCCATaGGTGGGTGGGCCGCAGACG +
Preference number: 2 (lower is better)
Translates to: TSAYRCLGWPFPHPSDTFIPQYP*VGGPQT
Trigger: CGTCTGCGGCCCACCCACCCATGGGTACTGTGGGAT...GAAAGTGTCTGATGGATGCGGAAATGGCCACCCCAAACACCGGTAAGCAGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp AGCGTGGCTTCGGGTCTACCAGATGCCTTCAAGGAAAAGGCCAGAACCTGCACTTCATGCCCGTCCAGCTaGACCTTGAGCTTGTGGAGC +
Preference number: 2 (lower is better)
Translates to: SVASGLPDAFKEKARTCTSCPSS*TLSLWS
Trigger: GCTCCACAAGCTCAAGGTCCAGCTGGACGGGCATGA...AGTGCAGGTTCTGGCCTTTTCCTTGAAGGCATCTGGTAGACCCGAAGCCACGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495936.6
3UTR-3UTR TCA 90 bp CGTCCCCACCCATGTGCCACCATCACTGGGCACTTAATACCTGCCTGGATGCTGTGCGCCCGGCCCCAGTaGCTATTTATGAGAACAAAA +
Preference number: 2 (lower is better)
Translates to: RPHPCATITGHLIPAWMLCARPQ*LFMRTK
Trigger: TTTTGTTCTCATAAATAGTCACTGGGGCCGGGCGCA...CAGCATCCAGGCAGGTATTAAGTGCCCAGTGATGGTGGCACATGGGTGGGGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR TCA 90 bp AGGGCAGCTGTTTTAAAAACCCGCACACAGGACAGTGGCTGTCTCTGCCGCACGTGTAGTGCAATGGCGTaGTCTCAGCTCACTGCAACC +
Preference number: 2 (lower is better)
Translates to: RAAVLKTRTQDSGCLCRTCSAMA*SQLTAT
Trigger: GGTTGCAGTGAGCTGAGATCACGCCATTGCACTACA...CGTGCGGCAGAGACAGCCACTGTCCTGTGTGCGGGTTTTTAAAACAGCTGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR TCA 90 bp CTTAACTTCGGCTCCCTGGTCAACTCACTTGGAGCAAGAGCACAGAGCCCGGCTAAAAGTCTGCGTCGATaGTCTGCTGGGTGTGGAGTG +
Preference number: 2 (lower is better)
Translates to: LNFGSLVNSLGARAQSPAKSLRR*SAGCGV
Trigger: CACTCCACACCCAGCAGATCATCGACGCAGACTTTT...AGCCGGGCTCTGTGCTCTTGCTCCAAGTGAGTTGACCAGGGAGCCGAAGTTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp GACAAGGCATGGCTGACTCTCCAGGTTACAGCTGGAGAAGAGGGGAAAGGTGTTGGCCAGAACCTGCACTaGACGGCACAGTCACTGTGT +
Preference number: 2 (lower is better)
Translates to: DKAWLTLQVTAGEEGKGVGQNLH*TAQSLC
Trigger: ACACAGTGACTGTGCCGTGCAGTGCAGGTTCTGGCC...AACACCTTTCCCCTCTTCTCCAGCTGTAACCTGGAGAGTCAGCCATGCCTTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp TCAGGCTTACGTGGTCTGGTCCTCAGCAGACCCTTCCTAGAAGACACGAAAACAGCCATCTCAGCTCACTaGAAGCTCTGCCTCCCGGGT +
Preference number: 2 (lower is better)
Translates to: SGLRGLVLSRPFLEDTKTAISAH*KLCLPG
Trigger: ACCCGGGAGGCAGAGCTTGCAGTGAGCTGAGATGGC...TGTTTTCGTGTCTTCTAGGAAGGGTCTGCTGAGGACCAGACCACGTAAGCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp TCAGGCTTACGTGGTCTGGTCCTCAGCAGACCCTTCCTAGAAGACACGAAAACACCAGGCCAAGAGCTCTaGCTGGGGACCAGGTACAGT +
Preference number: 2 (lower is better)
Translates to: SGLRGLVLSRPFLEDTKTPGQEL*LGTRYS
Trigger: ACTGTACCTGGTCCCCAGGCAGAGCTCTTGGCCTGG...TGTTTTCGTGTCTTCTAGGAAGGGTCTGCTGAGGACCAGACCACGTAAGCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp TCAGGCTTACGTGGTCTGGTCCTCAGCAGACCCTTCCTAGAAGACACGAAAACACCGTCCCCACCCATGTaGCACCATCACTGGGCACTT +
Preference number: 2 (lower is better)
Translates to: SGLRGLVLSRPFLEDTKTPSPPM*HHHWAL
Trigger: AAGTGCCCAGTGATGGTGGCACATGGGTGGGGACGG...TGTTTTCGTGTCTTCTAGGAAGGGTCTGCTGAGGACCAGACCACGTAAGCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp TCAGGCTTACGTGGTCTGGTCCTCAGCAGACCCTTCCTAGAAGACACGAAAACACCATTCTCCTGCCTCTaGCTCCCGAGCAGCTGGGAT +
Preference number: 2 (lower is better)
Translates to: SGLRGLVLSRPFLEDTKTPFSCL*LPSSWD
Trigger: ATCCCAGCTGCTCGGGAGGCAGAGGCAGGAGAATGG...TGTTTTCGTGTCTTCTAGGAAGGGTCTGCTGAGGACCAGACCACGTAAGCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp ACATCTGCTTACCGGTGTTTGGGGTGGCCATTTCCGCATCCATCAGACACTTTCTTCACGCCATTCTCCTaGCTCTGCCTCCCGAGCAGC +
Preference number: 2 (lower is better)
Translates to: TSAYRCLGWPFPHPSDTFFTPFS*LCLPSS
Trigger: GCTGCTCGGGAGGCAGAGGCAGGAGAATGGCGTGAA...GAAAGTGTCTGATGGATGCGGAAATGGCCACCCCAAACACCGGTAAGCAGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp CTTAACTTCGGCTCCCTGGTCAACTCACTTGGAGCAAGAGCACAGAGCCCGGCTGCACCAGGAAGACTGTaGTCCAAATTAGGATGGGCC +
Preference number: 2 (lower is better)
Translates to: LNFGSLVNSLGARAQSPAAPGRL*SKLGWA
Trigger: GGCCCATCCTAATTTGGAGCACAGTCTTCCTGGTGC...AGCCGGGCTCTGTGCTCTTGCTCCAAGTGAGTTGACCAGGGAGCCGAAGTTAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp AAGACCCACGGCGACACCTTACCCAACCAGGATGGGGCTGGAGAAGGCCACGCCATCTACATAACGCCATaGATAGATCATCAGCACGAG +
Preference number: 2 (lower is better)
Translates to: KTHGDTLPNQDGAGEGHAIYITP*IDHQHE
Trigger: CTCGTGCTGATGATCTATGCATGGCGTTATGTAGAT...GGCGTGGCCTTCTCCAGCCCCATCCTGGTTGGGTAAGGTGTCGCCGTGGGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp CTAAAGAGCTGGGAACAGCTTCAGAGTCAGGCTCAGCCTGACTCATGCTTGACACCTGGATGGGGGAGCTaGTCTGCTGTTCCTGTGGCT +
Preference number: 2 (lower is better)
Translates to: LKSWEQLQSQAQPDSCLTPGWGS*SAVPVA
Trigger: AGCCACAGGAACAGCAGAGCAGCTCCCCCATCCAGG...TGTCAAGCATGAGTCAGGCTGAGCCTGACTCTGAAGCTGTTCCCAGCTCTTTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp TCAGGCTTACGTGGTCTGGTCCTCAGCAGACCCTTCCTAGAAGACACGAAAACAGCCAAGGAACCAGCCTaGCTTTGCCCCCAACGCTCT +
Preference number: 2 (lower is better)
Translates to: SGLRGLVLSRPFLEDTKTAKEPA*LCPQRS
Trigger: AGAGCGTTGGGGGCAAAGCCAGGCTGGTTCCTTGGC...TGTTTTCGTGTCTTCTAGGAAGGGTCTGCTGAGGACCAGACCACGTAAGCCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp ACATCTGCTTACCGGTGTTTGGGGTGGCCATTTCCGCATCCATCAGACACTTTCGCCAAGGAACCAGCCTaGCTTTGCCCCCAACGCTCT +
Preference number: 2 (lower is better)
Translates to: TSAYRCLGWPFPHPSDTFAKEPA*LCPQRS
Trigger: AGAGCGTTGGGGGCAAAGCCAGGCTGGTTCCTTGGC...GAAAGTGTCTGATGGATGCGGAAATGGCCACCCCAAACACCGGTAAGCAGATGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp AGCCGCTTCAGAAAGATGTTCAGGAAACACCGTTGCCTGTTTGCTCAGAGTGGCCAGGCTGCCCACCATTaGAAACATCCCCCAGGGCCT +
Preference number: 2 (lower is better)
Translates to: SRFRKMFRKHRCLFAQSGQAAHH*KHPPGP
Trigger: AGGCCCTGGGGGATGTTTCCAATGGTGGGCAGCCTG...GCCACTCTGAGCAAACAGGCAACGGTGTTTCCTGAACATCTTTCTGAAGCGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp CGTACTTTGCAGCAGCCCTCAAATAACTCAGCCTCCTCAAGGGGGCATCTGATACAGGCTGCCCACCATTaGAAACATCCCCCAGGGCCT +
Preference number: 2 (lower is better)
Translates to: RTLQQPSNNSASSRGHLIQAAHH*KHPPGP
Trigger: AGGCCCTGGGGGATGTTTCCAATGGTGGGCAGCCTG...TATCAGATGCCCCCTTGAGGAGGCTGAGTTATTTGAGGGCTGCTGCAAAGTACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp CTCAGCACGGAAAACTGCATGTCAGGGTCTCTGTTCTCTGCTGCAGCCACATTTCAGGCTGCCCACCATTaGAAACATCCCCCAGGGCCT +
Preference number: 2 (lower is better)
Translates to: LSTENCMSGSLFSAAATFQAAHH*KHPPGP
Trigger: AGGCCCTGGGGGATGTTTCCAATGGTGGGCAGCCTG...AAATGTGGCTGCAGCAGAGAACAGAGACCCTGACATGCAGTTTTCCGTGCTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp CTAAAGAGCTGGGAACAGCTTCAGAGTCAGGCTCAGCCTGACTCATGCTTGACACAGGCTGCCCACCATTaGAAACATCCCCCAGGGCCT +
Preference number: 2 (lower is better)
Translates to: LKSWEQLQSQAQPDSCLTQAAHH*KHPPGP
Trigger: AGGCCCTGGGGGATGTTTCCAATGGTGGGCAGCCTG...TGTCAAGCATGAGTCAGGCTGAGCCTGACTCTGAAGCTGTTCCCAGCTCTTTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp CGTACTTTGCAGCAGCCCTCAAATAACTCAGCCTCCTCAAGGGGGCATCTGATAATGTCTTCTCCGGCCTaGCCAGGCTGCCCACCATTG +
Preference number: 2 (lower is better)
Translates to: RTLQQPSNNSASSRGHLIMSSPA*PGCPPL
Trigger: CAATGGTGGGCAGCCTGGCCAGGCCGGAGAAGACAT...TATCAGATGCCCCCTTGAGGAGGCTGAGTTATTTGAGGGCTGCTGCAAAGTACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp GACAAGGCATGGCTGACTCTCCAGGTTACAGCTGGAGAAGAGGGGAAAGGTGTTTTAGAGGCCATTCTGTaGCCGAGAGCTGGAGGCCAG +
Preference number: 2 (lower is better)
Translates to: DKAWLTLQVTAGEEGKGVLEAIL*PRAGGQ
Trigger: CTGGCCTCCAGCTCTCGGCCACAGAATGGCCTCTAA...AACACCTTTCCCCTCTTCTCCAGCTGTAACCTGGAGAGTCAGCCATGCCTTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp CACATTCCGCCTTCCAAGTTTCTAAACCAGAAACACCTGCGTTTTGAAACAGGTGGCACTCATTTGGCCTaGGCCGGCCCCTGGCCCCAC +
Preference number: 2 (lower is better)
Translates to: HIPPSKFLNQKHLRFETGGTHLA*AGPWPH
Trigger: GTGGGGCCAGGGGCCGGCCCAGGCCAAATGAGTGCC...ACCTGTTTCAAAACGCAGGTGTTTCTGGTTTAGAAACTTGGAAGGCGGAATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp CTGCGCCCGGCCACTAGCACAGTTATAGTTCACTGCAGCCTCTACTTCCCAGGCGAGGGGAAAGGTGTTTaGTTGTACAAGCAGCTCAGG +
Preference number: 2 (lower is better)
Translates to: LRPATSTVIVHCSLYFPGEGKGV*LYKQLR
Trigger: CCTGAGCTGCTTGTACAACCAAACACCTTTCCCCTC...GCCTGGGAAGTAGAGGCTGCAGTGAACTATAACTGTGCTAGTGGCCGGGCGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp CGTCCCCACCCATGTGCCACCATCACTGGGCACTTAATACCTGCCTGGATGCTGTCTCCAGGTTACAGCTaGAGAAGAGGGGAAAGGTGT +
Preference number: 2 (lower is better)
Translates to: RPHPCATITGHLIPAWMLSPGYS*RRGERC
Trigger: ACACCTTTCCCCTCTTCTCCAGCTGTAACCTGGAGA...CAGCATCCAGGCAGGTATTAAGTGCCCAGTGATGGTGGCACATGGGTGGGGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp GATTGGCAGAACCAAGGCACTGCCCTAGACGCTTTCCATGGAGTGGTGCCAGTTACCAGGTACAGTAACTaGCCCCCAGATGGCACTGGA +
Preference number: 2 (lower is better)
Translates to: DWQNQGTALDAFHGVVPVTRYSN*PPDGTG
Trigger: TCCAGTGCCATCTGGGGGCCAGTTACTGTACCTGGT...AACTGGCACCACTCCATGGAAAGCGTCTAGGGCAGTGCCTTGGTTCTGCCAATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp CTAAAGAGCTGGGAACAGCTTCAGAGTCAGGCTCAGCCTGACTCATGCTTGACACTCTCCCGGCCACCATaGCCCTACCAATGGTCACTG +
Preference number: 2 (lower is better)
Translates to: LKSWEQLQSQAQPDSCLTLSRPP*PYQWSL
Trigger: CAGTGACCATTGGTAGGGCCATGGTGGCCGGGAGAG...TGTCAAGCATGAGTCAGGCTGAGCCTGACTCTGAAGCTGTTCCCAGCTCTTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp CTAAAGAGCTGGGAACAGCTTCAGAGTCAGGCTCAGCCTGACTCATGCTTGACATGCTCCAAATTAGGATaGGCCCTGGCTGGCTCCCGG +
Preference number: 2 (lower is better)
Translates to: LKSWEQLQSQAQPDSCLTCSKLG*ALAGSR
Trigger: CCGGGAGCCAGCCAGGGCCCATCCTAATTTGGAGCA...TGTCAAGCATGAGTCAGGCTGAGCCTGACTCTGAAGCTGTTCCCAGCTCTTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp TCAGGCTTACGTGGTCTGGTCCTCAGCAGACCCTTCCTAGAAGACACGAAAACAAGAGGGTGTACCACGTaGGAGGGGCCTTGGCATGTC +
Preference number: 2 (lower is better)
Translates to: SGLRGLVLSRPFLEDTKTRGCTT*EGPWHV
Trigger: GACATGCCAAGGCCCCTCCCACGTGGTACACCCTCT...TGTTTTCGTGTCTTCTAGGAAGGGTCTGCTGAGGACCAGACCACGTAAGCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp CTTAACTTCGGCTCCCTGGTCAACTCACTTGGAGCAAGAGCACAGAGCCCGGCTACGCTTTCCATGGAGTaGTGCCAGTTGCTTGGCACA +
Preference number: 2 (lower is better)
Translates to: LNFGSLVNSLGARAQSPATLSME*CQLLGT
Trigger: TGTGCCAAGCAACTGGCACCACTCCATGGAAAGCGT...AGCCGGGCTCTGTGCTCTTGCTCCAAGTGAGTTGACCAGGGAGCCGAAGTTAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp CTAAAGAGCTGGGAACAGCTTCAGAGTCAGGCTCAGCCTGACTCATGCTTGACAGCCCAAGGGGCAGCCTaGCTTCTCAGGATTGGCAGA +
Preference number: 2 (lower is better)
Translates to: LKSWEQLQSQAQPDSCLTAQGAA*LLRIGR
Trigger: TCTGCCAATCCTGAGAAGCCAGGCTGCCCCTTGGGC...TGTCAAGCATGAGTCAGGCTGAGCCTGACTCTGAAGCTGTTCCCAGCTCTTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp CTAAAGAGCTGGGAACAGCTTCAGAGTCAGGCTCAGCCTGACTCATGCTTGACACAACCAGGATGGGGCTaGAGAAGGCCACGCCAGGAT +
Preference number: 2 (lower is better)
Translates to: LKSWEQLQSQAQPDSCLTQPGWG*RRPRQD
Trigger: ATCCTGGCGTGGCCTTCTCCAGCCCCATCCTGGTTG...TGTCAAGCATGAGTCAGGCTGAGCCTGACTCTGAAGCTGTTCCCAGCTCTTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR TCA 90 bp ATGAAGTCCACCACGGGTCTCTGGGGCAATCCTTCTCTGAACGCAAAACCCTGCCAAAATGTCTGCATCTaGCAAATCCCCGCCTCTGCG +
Preference number: 2 (lower is better)
Translates to: MKSTTGLWGNPSLNAKPCQNVCI*QIPASA
Trigger: CGCAGAGGCGGGGATTTGTCAGATGCAGACATTTTG...GCAGGGTTTTGCGTTCAGAGAAGGATTGCCCCAGAGACCCGTGGTGGACTTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR TCA 90 bp AGCGTGGCTTCGGGTCTACCAGATGCCTTCAAGGAAAAGGCCAGAACCTGCACTTCTGATAGATGCCCGTaGACATGTCTTCTCCGGCCT +
Preference number: 2 (lower is better)
Translates to: SVASGLPDAFKEKARTCTSDRCP*TCLLRP
Trigger: AGGCCGGAGAAGACATGTTCACGGGCATCTATCAGA...AGTGCAGGTTCTGGCCTTTTCCTTGAAGGCATCTGGTAGACCCGAAGCCACGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR TCA 90 bp AGGGCAGCTGTTTTAAAAACCCGCACACAGGACAGTGGCTGTCTCTGCCGCACGTGCGCCCGGCCCCAGTaGCTATTTATGAGAACAAAA +
Preference number: 2 (lower is better)
Translates to: RAAVLKTRTQDSGCLCRTCARPQ*LFMRTK
Trigger: TTTTGTTCTCATAAATAGTCACTGGGGCCGGGCGCA...CGTGCGGCAGAGACAGCCACTGTCCTGTGTGCGGGTTTTTAAAACAGCTGCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR TCA 90 bp CGTCCCCACCCATGTGCCACCATCACTGGGCACTTAATACCTGCCTGGATGCTGTCGCCTGGCCGATGTTaGTATTCTTTAGCAAAGCGA +
Preference number: 2 (lower is better)
Translates to: RPHPCATITGHLIPAWMLSPGRC*YSLAKR
Trigger: TCGCTTTGCTAAAGAATATCAACATCGGCCAGGCGA...CAGCATCCAGGCAGGTATTAAGTGCCCAGTGATGGTGGCACATGGGTGGGGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR TCA 90 bp GGGCAGCCTGGCTTCTCAGGATTGGCAGAACCAAGGCACTGCCCTAGACGCTTTTCGCCTGGCCGATGTTaGTATTCTTTAGCAAAGCGA +
Preference number: 2 (lower is better)
Translates to: GQPGFSGLAEPRHCPRRFSPGRC*YSLAKR
Trigger: TCGCTTTGCTAAAGAATATCAACATCGGCCAGGCGA...AAAGCGTCTAGGGCAGTGCCTTGGTTCTGCCAATCCTGAGAAGCCAGGCTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR TCA 90 bp GCTACAGGTTGGCAGGTTCTACATGGGTTTCGGCTCCTGTGTGGGCCTTGCCCTGAAACACCTGCGTTTTaGAACAGGTGGTCAGGTACT +
Preference number: 2 (lower is better)
Translates to: ATGWQVLHGFRLLCGPCPETPAF*NRWSGT
Trigger: AGTACCTGACCACCTGTTTCAAAACGCAGGTGTTTC...AGGGCAAGGCCCACACAGGAGCCGAAACCCATGTAGAACCTGCCAACCTGTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR TCA 90 bp CTAAAGAGCTGGGAACAGCTTCAGAGTCAGGCTCAGCCTGACTCATGCTTGACACGGCGTGTCTGGACATaGGTACCCTGCCTCCATTCT +
Preference number: 2 (lower is better)
Translates to: LKSWEQLQSQAQPDSCLTRRVWT*VPCLHS
Trigger: AGAATGGAGGCAGGGTACTCATGTCCAGACACGCCG...TGTCAAGCATGAGTCAGGCTGAGCCTGACTCTGAAGCTGTTCCCAGCTCTTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR TCA 90 bp ACATCTGCTTACCGGTGTTTGGGGTGGCCATTTCCGCATCCATCAGACACTTTCAGGAGGAGGTTGCAGTaGGCCAAGATCATGCCACCG +
Preference number: 2 (lower is better)
Translates to: TSAYRCLGWPFPHPSDTFRRRLQ*AKIMPP
Trigger: CGGTGGCATGATCTTGGCTCACTGCAACCTCCTCCT...GAAAGTGTCTGATGGATGCGGAAATGGCCACCCCAAACACCGGTAAGCAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp GAGTCACTGCGCCCGGCCCCAGTGACTATTTATGAGAACAAAAGACAAGGCATGGGCCTGGAGGGGTCTTaGCTCCCTTGTAGTCACTTG +
Preference number: 2 (lower is better)
Translates to: ESLRPAPVTIYENKRQGMGLEGS*LPCSHL
Trigger: CAAGTGACTACAAGGGAGGCAAGACCCCTCCAGGCC...CATGCCTTGTCTTTTGTTCTCATAAATAGTCACTGGGGCCGGGCGCAGTGACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp AAAGGCTGGAGCTGGGAGAACGAGAACCCTAGGAGAAAGAGAACAAGAAATTCCTGCAGGCTGCGCTCATaGCCGTCCAGCTGGACCTTG +
Preference number: 2 (lower is better)
Translates to: KGWSWENENPRRKRTRNSCRLRS*PSSWTL
Trigger: CAAGGTCCAGCTGGACGGGCATGAGCGCAGCCTGCA...GGAATTTCTTGTTCTCTTTCTCCTAGGGTTCTCGTTCTCCCAGCTCCAGCCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495936.6
3UTR-3UTR CCA 90 bp CACATTCCGCCTTCCAAGTTTCTAAACCAGAAACACCTGCGTTTTGAAACAGGTAGGAGGGCACTCATTTaGCCTGGGCCGGCCCCTGGC +
Preference number: 2 (lower is better)
Translates to: HIPPSKFLNQKHLRFETGRRALI*PGPAPG
Trigger: GCCAGGGGCCGGCCCAGGCCAAATGAGTGCCCTCCT...ACCTGTTTCAAAACGCAGGTGTTTCTGGTTTAGAAACTTGGAAGGCGGAATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp CGTCCCCACCCATGTGCCACCATCACTGGGCACTTAATACCTGCCTGGATGCTGTCCCTTGTAGTCACTTaGTGTCATAACAAGGAGGGC +
Preference number: 2 (lower is better)
Translates to: RPHPCATITGHLIPAWMLSLVVT*CHNKEG
Trigger: GCCCTCCTTGTTATGACACCAAGTGACTACAAGGGA...CAGCATCCAGGCAGGTATTAAGTGCCCAGTGATGGTGGCACATGGGTGGGGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp CTGCGCCCGGCCACTAGCACAGTTATAGTTCACTGCAGCCTCTACTTCCCAGGCTCCCTTGTAGTCACTTaGTGTCATAACAAGGAGGGC +
Preference number: 2 (lower is better)
Translates to: LRPATSTVIVHCSLYFPGSLVVT*CHNKEG
Trigger: GCCCTCCTTGTTATGACACCAAGTGACTACAAGGGA...GCCTGGGAAGTAGAGGCTGCAGTGAACTATAACTGTGCTAGTGGCCGGGCGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp TCAGGCTTACGTGGTCTGGTCCTCAGCAGACCCTTCCTAGAAGACACGAAAACAAGTCACTGTGTGTGGTaGGACCCAGTGTCGGCTGAG +
Preference number: 2 (lower is better)
Translates to: SGLRGLVLSRPFLEDTKTSHCVW*DPVSAE
Trigger: CTCAGCCGACACTGGGTCCCACCACACACAGTGACT...TGTTTTCGTGTCTTCTAGGAAGGGTCTGCTGAGGACCAGACCACGTAAGCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp CTCAGCACGGAAAACTGCATGTCAGGGTCTCTGTTCTCTGCTGCAGCCACATTTCACAGTCACTGTGTGTaGTGGGACCCAGTGTCGGCT +
Preference number: 2 (lower is better)
Translates to: LSTENCMSGSLFSAAATFHSHCV*WDPVSA
Trigger: AGCCGACACTGGGTCCCACCACACACAGTGACTGTG...AAATGTGGCTGCAGCAGAGAACAGAGACCCTGACATGCAGTTTTCCGTGCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp AGCCGCTTCAGAAAGATGTTCAGGAAACACCGTTGCCTGTTTGCTCAGAGTGGCGCAGTGGCACCATCTTaGCTCACTGCTACCTCTGCC +
Preference number: 2 (lower is better)
Translates to: SRFRKMFRKHRCLFAQSGAVAPS*LTATSA
Trigger: GGCAGAGGTAGCAGTGAGCCAAGATGGTGCCACTGC...GCCACTCTGAGCAAACAGGCAACGGTGTTTCCTGAACATCTTTCTGAAGCGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp CTAAAGAGCTGGGAACAGCTTCAGAGTCAGGCTCAGCCTGACTCATGCTTGACAGCCCCCAGATGGCACTaGAGATGCGTTCCACAGTCT +
Preference number: 2 (lower is better)
Translates to: LKSWEQLQSQAQPDSCLTAPRWH*RCVPQS
Trigger: AGACTGTGGAACGCATCTCCAGTGCCATCTGGGGGC...TGTCAAGCATGAGTCAGGCTGAGCCTGACTCTGAAGCTGTTCCCAGCTCTTTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp AGGTTTCCTCTCCCGGCCACCATGGCCCTACCAATGGTCACTGCTATTCCCACAATGTGCCACCATCACTaGGCACTTAATACCTGCCTG +
Preference number: 2 (lower is better)
Translates to: RFPLPATMALPMVTAIPTMCHHH*ALNTCL
Trigger: CAGGCAGGTATTAAGTGCCCAGTGATGGTGGCACAT...TGTGGGAATAGCAGTGACCATTGGTAGGGCCATGGTGGCCGGGAGAGGAAACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp CTTAACTTCGGCTCCCTGGTCAACTCACTTGGAGCAAGAGCACAGAGCCCGGCTATGTGCCACCATCACTaGGCACTTAATACCTGCCTG +
Preference number: 2 (lower is better)
Translates to: LNFGSLVNSLGARAQSPAMCHHH*ALNTCL
Trigger: CAGGCAGGTATTAAGTGCCCAGTGATGGTGGCACAT...AGCCGGGCTCTGTGCTCTTGCTCCAAGTGAGTTGACCAGGGAGCCGAAGTTAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp GCTGGGATTATAGGTGTGAGCTACAGGTTGGCAGGTTCTACATGGGTTTCGGCTACTCCAGCTCTGGCCTaGGCAATAGAGCCCAACCCT +
Preference number: 2 (lower is better)
Translates to: AGIIGVSYRLAGSTWVSATPALA*AIEPNP
Trigger: AGGGTTGGGCTCTATTGCCCAGGCCAGAGCTGGAGT...AGCCGAAACCCATGTAGAACCTGCCAACCTGTAGCTCACACCTATAATCCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp AGCCGCTTCAGAAAGATGTTCAGGAAACACCGTTGCCTGTTTGCTCAGAGTGGCGCGTCGATGATCTGCTaGGTGTGGAGTGGGTCCTTC +
Preference number: 2 (lower is better)
Translates to: SRFRKMFRKHRCLFAQSGASMIC*VWSGSF
Trigger: GAAGGACCCACTCCACACCCAGCAGATCATCGACGC...GCCACTCTGAGCAAACAGGCAACGGTGTTTCCTGAACATCTTTCTGAAGCGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR CAA 90 bp ACAAGAAATTCCAAGACTGTCATCCTCCTAATCAGAGGGCTAGACTaGGATGTGGCTCCGTCCCCACCCATGTGCCACCATCACTGGGCA +
Preference number: 2 (lower is better)
Translates to: TRNSKTVILLIRGLD*DVAPSPPMCHHHWA
Trigger: TGCCCAGTGATGGTGGCACATGGGTGGGGACGGAGCCACATCCAAGTCTAGCCCTCTGATTAGGAGGATGACAGTCTTGGAATTTCTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR CAA 90 bp CACCATGGCCCTACCAATGGTCACTGCTATTCCCACAGCAATGGTTaGCCTCATGCCTCGAAACTAGAAAGGCTGGAGCTGGGAGAACGA +
Preference number: 2 (lower is better)
Translates to: HHGPTNGHCYSHSNG*PHASKLERLELGER
Trigger: TCGTTCTCCCAGCTCCAGCCTTTCTAGTTTCGAGGCATGAGGCAAACCATTGCTGTGGGAATAGCAGTGACCATTGGTAGGGCCATGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR TCA 90 bp CTCAGCACCCATGAAGTCCACCACGGGTCTCTGGGGCAATCCTTCTCTGAACGCAACACAGTCCCTCATTaGACCAAACGGTTCTATCTC +
Preference number: 2 (lower is better)
Translates to: LSTHEVHHGSLGQSFSERNTVPH*TKRFYL
Trigger: GAGATAGAACCGTTTGGTTCAATGAGGGACTGTGTT...GCGTTCAGAGAAGGATTGCCCCAGAGACCCGTGGTGGACTTCATGGGTGCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR TCA 90 bp GACAAGGCATGGCTGACTCTCCAGGTTACAGCTGGAGAAGAGGGGAAAGGTGTTTCTGATAGATGCCCGTaGACATGTCTTCTCCGGCCT +
Preference number: 2 (lower is better)
Translates to: DKAWLTLQVTAGEEGKGVSDRCP*TCLLRP
Trigger: AGGCCGGAGAAGACATGTTCACGGGCATCTATCAGA...AACACCTTTCCCCTCTTCTCCAGCTGTAACCTGGAGAGTCAGCCATGCCTTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR TCA 90 bp AGGGCAGCTGTTTTAAAAACCCGCACACAGGACAGTGGCTGTCTCTGCCGCACGTCGCCTGGCCGATGTTaGTATTCTTTAGCAAAGCGA +
Preference number: 2 (lower is better)
Translates to: RAAVLKTRTQDSGCLCRTSPGRC*YSLAKR
Trigger: TCGCTTTGCTAAAGAATATCAACATCGGCCAGGCGA...CGTGCGGCAGAGACAGCCACTGTCCTGTGTGCGGGTTTTTAAAACAGCTGCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR TCA 90 bp CTTAACTTCGGCTCCCTGGTCAACTCACTTGGAGCAAGAGCACAGAGCCCGGCTCTGGTCTTAAAGTCCTaGTCTCAAGTGATCTGCCTG +
Preference number: 2 (lower is better)
Translates to: LNFGSLVNSLGARAQSPALVLKS*SQVICL
Trigger: CAGGCAGATCACTTGAGATCAGGACTTTAAGACCAG...AGCCGGGCTCTGTGCTCTTGCTCCAAGTGAGTTGACCAGGGAGCCGAAGTTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR TCA 90 bp ACATCTGCTTACCGGTGTTTGGGGTGGCCATTTCCGCATCCATCAGACACTTTCGTTGCTTGGCACACCTaGTTCCTAGCAGCCTCTAGG +
Preference number: 2 (lower is better)
Translates to: TSAYRCLGWPFPHPSDTFVAWHT*FLAASR
Trigger: CCTAGAGGCTGCTAGGAATCAGGTGTGCCAAGCAAC...GAAAGTGTCTGATGGATGCGGAAATGGCCACCCCAAACACCGGTAAGCAGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp GCACCCATGAAGTCCACCACGGGTCTCTGGGGCAATCCTTCTCTGAACGCAAAAACTACCCGGCAGCCTTaGAAAATGTCTGCATCTGAC +
Preference number: 2 (lower is better)
Translates to: APMKSTTGLWGNPSLNAKTTRQP*KMSASD
Trigger: GTCAGATGCAGACATTTTGCAAGGCTGCCGGGTAGT...TTTTGCGTTCAGAGAAGGATTGCCCCAGAGACCCGTGGTGGACTTCATGGGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp AGGTTTCCTCTCCCGGCCACCATGGCCCTACCAATGGTCACTGCTATTCCCACAAGGAAAGTACATACATaGTGGAGGGCAAAGGTCGCA +
Preference number: 2 (lower is better)
Translates to: RFPLPATMALPMVTAIPTRKVHT*WRAKVA
Trigger: TGCGACCTTTGCCCTCCAGCATGTATGTACTTTCCT...TGTGGGAATAGCAGTGACCATTGGTAGGGCCATGGTGGCCGGGAGAGGAAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp CTAAAGAGCTGGGAACAGCTTCAGAGTCAGGCTCAGCCTGACTCATGCTTGACAACGATCTCAGCTCACTaGAACCTCTGCCTCCTGCGT +
Preference number: 2 (lower is better)
Translates to: LKSWEQLQSQAQPDSCLTTISAH*NLCLLR
Trigger: ACGCAGGAGGCAGAGGTTGCAGTGAGCTGAGATCGT...TGTCAAGCATGAGTCAGGCTGAGCCTGACTCTGAAGCTGTTCCCAGCTCTTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp AGCCGCTTCAGAAAGATGTTCAGGAAACACCGTTGCCTGTTTGCTCAGAGTGGCTTGTCCAGGCTGGAGTaGAGTGGCACGATCTCAGCT +
Preference number: 2 (lower is better)
Translates to: SRFRKMFRKHRCLFAQSGLSRLE*SGTISA
Trigger: AGCTGAGATCGTGCCACTGCACTCCAGCCTGGACAA...GCCACTCTGAGCAAACAGGCAACGGTGTTTCCTGAACATCTTTCTGAAGCGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp ACATCTGCTTACCGGTGTTTGGGGTGGCCATTTCCGCATCCATCAGACACTTTCCTGGGAGGAGGAGGTTaGAGTGAGCCAAGATCATGC +
Preference number: 2 (lower is better)
Translates to: TSAYRCLGWPFPHPSDTFLGGGG*SEPRSC
Trigger: GCATGATCTTGGCTCACTGCAACCTCCTCCTCCCAG...GAAAGTGTCTGATGGATGCGGAAATGGCCACCCCAAACACCGGTAAGCAGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp CTAAAGAGCTGGGAACAGCTTCAGAGTCAGGCTCAGCCTGACTCATGCTTGACAGCAGAACCAAGGCACTaGCCTAGACGCTTTCCATGG +
Preference number: 2 (lower is better)
Translates to: LKSWEQLQSQAQPDSCLTAEPRH*PRRFPW
Trigger: CCATGGAAAGCGTCTAGGGCAGTGCCTTGGTTCTGC...TGTCAAGCATGAGTCAGGCTGAGCCTGACTCTGAAGCTGTTCCCAGCTCTTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp ACATCTGCTTACCGGTGTTTGGGGTGGCCATTTCCGCATCCATCAGACACTTTCTCCACCACGGGTCTCTaGGGCAATCCTTCTCTGAAC +
Preference number: 2 (lower is better)
Translates to: TSAYRCLGWPFPHPSDTFSTTGL*GNPSLN
Trigger: GTTCAGAGAAGGATTGCCCCAGAGACCCGTGGTGGA...GAAAGTGTCTGATGGATGCGGAAATGGCCACCCCAAACACCGGTAAGCAGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp AAAGGCTGGAGCTGGGAGAACGAGAACCCTAGGAGAAAGAGAACAAGAAATTCCCAGGCTGCCCACCATTaGAAACATCCCCCAGGGCCT +
Preference number: 2 (lower is better)
Translates to: KGWSWENENPRRKRTRNSQAAHH*KHPPGP
Trigger: AGGCCCTGGGGGATGTTTCCAATGGTGGGCAGCCTG...GGAATTTCTTGTTCTCTTTCTCCTAGGGTTCTCGTTCTCCCAGCTCCAGCCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp ATCCAGGGCAGCTGTTTTAAAAACCCGCACACAGGACAGTGGCTGTCTCTGCCGGAGGGGAAAGGTGTTTaGTTGTACAAGCAGCTCAGG +
Preference number: 2 (lower is better)
Translates to: IQGSCFKNPHTGQWLSLPEGKGV*LYKQLR
Trigger: CCTGAGCTGCTTGTACAACCAAACACCTTTCCCCTC...CGGCAGAGACAGCCACTGTCCTGTGTGCGGGTTTTTAAAACAGCTGCCCTGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp CTAAAGAGCTGGGAACAGCTTCAGAGTCAGGCTCAGCCTGACTCATGCTTGACACCCAAAGCCACTCCTTaGAGGAACGCTGACATGCTG +
Preference number: 2 (lower is better)
Translates to: LKSWEQLQSQAQPDSCLTPKATP*RNADML
Trigger: CAGCATGTCAGCGTTCCTCCAAGGAGTGGCTTTGGG...TGTCAAGCATGAGTCAGGCTGAGCCTGACTCTGAAGCTGTTCCCAGCTCTTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp GTCCTTCCATGCTGGCCCTTCCAGCACTCCTGCAGAGCACACTTTAGGAAACTCCCACCACACCTGGTCTaGAGCCCTCTGTTCTTAAAT +
Preference number: 2 (lower is better)
Translates to: VLPCWPFQHSCRAHFRKLPPHLV*SPLFLN
Trigger: ATTTAAGAACAGAGGGCTCCAGACCAGGTGTGGTGG...GAGTTTCCTAAAGTGTGCTCTGCAGGAGTGCTGGAAGGGCCAGCATGGAAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp ATCCAGGGCAGCTGTTTTAAAAACCCGCACACAGGACAGTGGCTGTCTCTGCCGCCACCACACCTGGTCTaGAGCCCTCTGTTCTTAAAT +
Preference number: 2 (lower is better)
Translates to: IQGSCFKNPHTGQWLSLPPPHLV*SPLFLN
Trigger: ATTTAAGAACAGAGGGCTCCAGACCAGGTGTGGTGG...CGGCAGAGACAGCCACTGTCCTGTGTGCGGGTTTTTAAAACAGCTGCCCTGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR TCA 90 bp CGTACTTTGCAGCAGCCCTCAAATAACTCAGCCTCCTCAAGGGGGCATCTGATACAAAATGTCTGCATCTaGCAAATCCCCGCCTCTGCG +
Preference number: 2 (lower is better)
Translates to: RTLQQPSNNSASSRGHLIQNVCI*QIPASA
Trigger: CGCAGAGGCGGGGATTTGTCAGATGCAGACATTTTG...TATCAGATGCCCCCTTGAGGAGGCTGAGTTATTTGAGGGCTGCTGCAAAGTACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR TCA 90 bp AGGGCAGCTGTTTTAAAAACCCGCACACAGGACAGTGGCTGTCTCTGCCGCACGAACACAGTCCCTCATTaGACCAAACGGTTCTATCTC +
Preference number: 2 (lower is better)
Translates to: RAAVLKTRTQDSGCLCRTNTVPH*TKRFYL
Trigger: GAGATAGAACCGTTTGGTTCAATGAGGGACTGTGTT...CGTGCGGCAGAGACAGCCACTGTCCTGTGTGCGGGTTTTTAAAACAGCTGCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR TCA 90 bp ACATCTGCTTACCGGTGTTTGGGGTGGCCATTTCCGCATCCATCAGACACTTTCAAGACAAGGCATGGCTaGCTCTCCAGGTTACAGCTG +
Preference number: 2 (lower is better)
Translates to: TSAYRCLGWPFPHPSDTFKTRHG*LSRLQL
Trigger: CAGCTGTAACCTGGAGAGTCAGCCATGCCTTGTCTT...GAAAGTGTCTGATGGATGCGGAAATGGCCACCCCAAACACCGGTAAGCAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR TCA 90 bp CTGCGCCCGGCCACTAGCACAGTTATAGTTCACTGCAGCCTCTACTTCCCAGGCGATGTGATCAGAGCATaGAGAAGCCCAGTGATTTTT +
Preference number: 2 (lower is better)
Translates to: LRPATSTVIVHCSLYFPGDVIRA*RSPVIF
Trigger: AAAAATCACTGGGCTTCTTCATGCTCTGATCACATC...GCCTGGGAAGTAGAGGCTGCAGTGAACTATAACTGTGCTAGTGGCCGGGCGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR TCA 90 bp AGGTTTCCTCTCCCGGCCACCATGGCCCTACCAATGGTCACTGCTATTCCCACACTTTTACGAGAGATGTaGTCAGAGCATGAAGAAGCC +
Preference number: 2 (lower is better)
Translates to: RFPLPATMALPMVTAIPTLLREM*SEHEEA
Trigger: GGCTTCTTCATGCTCTGATCACATCTCTCGTAAAAG...TGTGGGAATAGCAGTGACCATTGGTAGGGCCATGGTGGCCGGGAGAGGAAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR TCA 90 bp GATTGGCAGAACCAAGGCACTGCCCTAGACGCTTTCCATGGAGTGGTGCCAGTTGAAACACCTGCGTTTTaGAACAGGTGGTCAGGTACT +
Preference number: 2 (lower is better)
Translates to: DWQNQGTALDAFHGVVPVETPAF*NRWSGT
Trigger: AGTACCTGACCACCTGTTTCAAAACGCAGGTGTTTC...AACTGGCACCACTCCATGGAAAGCGTCTAGGGCAGTGCCTTGGTTCTGCCAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp AGCGTGGCTTCGGGTCTACCAGATGCCTTCAAGGAAAAGGCCAGAACCTGCACTGAGCCTAGCGTACTTTaGAGCAGCCCTCAAATAACT +
Preference number: 2 (lower is better)
Translates to: SVASGLPDAFKEKARTCTEPSVL*SSPQIT
Trigger: AGTTATTTGAGGGCTGCTGCAAAGTACGCTAGGCTC...AGTGCAGGTTCTGGCCTTTTCCTTGAAGGCATCTGGTAGACCCGAAGCCACGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp GATTGGCAGAACCAAGGCACTGCCCTAGACGCTTTCCATGGAGTGGTGCCAGTTGAGCCTAGCGTACTTTaGAGCAGCCCTCAAATAACT +
Preference number: 2 (lower is better)
Translates to: DWQNQGTALDAFHGVVPVEPSVL*SSPQIT
Trigger: AGTTATTTGAGGGCTGCTGCAAAGTACGCTAGGCTC...AACTGGCACCACTCCATGGAAAGCGTCTAGGGCAGTGCCTTGGTTCTGCCAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp GTCCTTCCATGCTGGCCCTTCCAGCACTCCTGCAGAGCACACTTTAGGAAACTCCCTACCAATGGTCACTaGTATTCCCACAGCAATGGT +
Preference number: 2 (lower is better)
Translates to: VLPCWPFQHSCRAHFRKLPTNGH*YSHSNG
Trigger: ACCATTGCTGTGGGAATAGCAGTGACCATTGGTAGG...GAGTTTCCTAAAGTGTGCTCTGCAGGAGTGCTGGAAGGGCCAGCATGGAAGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp CTAAAGAGCTGGGAACAGCTTCAGAGTCAGGCTCAGCCTGACTCATGCTTGACATGGAGTGGTGCCAGTTaGTTGGCACACCTGATTCCT +
Preference number: 2 (lower is better)
Translates to: LKSWEQLQSQAQPDSCLTWSGAS*LAHLIP
Trigger: AGGAATCAGGTGTGCCAAGCAACTGGCACCACTCCA...TGTCAAGCATGAGTCAGGCTGAGCCTGACTCTGAAGCTGTTCCCAGCTCTTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp AAAGGCTGGAGCTGGGAGAACGAGAACCCTAGGAGAAAGAGAACAAGAAATTCCTGCCTCTCCCAGCCGTaGGGAGCCGTTTGTTTAGGA +
Preference number: 2 (lower is better)
Translates to: KGWSWENENPRRKRTRNSCLSQP*GAVCLG
Trigger: TCCTAAACAAACGGCTCCCCACGGCTGGGAGAGGCA...GGAATTTCTTGTTCTCTTTCTCCTAGGGTTCTCGTTCTCCCAGCTCCAGCCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp ACATCTGCTTACCGGTGTTTGGGGTGGCCATTTCCGCATCCATCAGACACTTTCCCATGGCCCTACCAATaGTCACTGCTATTCCCACAG +
Preference number: 2 (lower is better)
Translates to: TSAYRCLGWPFPHPSDTFPWPYQ*SLLFPQ
Trigger: CTGTGGGAATAGCAGTGACCATTGGTAGGGCCATGG...GAAAGTGTCTGATGGATGCGGAAATGGCCACCCCAAACACCGGTAAGCAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp AAAGGCTGGAGCTGGGAGAACGAGAACCCTAGGAGAAAGAGAACAAGAAATTCCTGGACCTTGAGCTTGTaGAGCTCCTCGATCTCGCGG +
Preference number: 2 (lower is better)
Translates to: KGWSWENENPRRKRTRNSWTLSL*SSSISR
Trigger: CCGCGAGATCGAGGAGCTCCACAAGCTCAAGGTCCA...GGAATTTCTTGTTCTCTTTCTCCTAGGGTTCTCGTTCTCCCAGCTCCAGCCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495936.6
3UTR-3UTR TCA 90 bp GATTGGCAGAACCAAGGCACTGCCCTAGACGCTTTCCATGGAGTGGTGCCAGTTAACACAGTCCCTCATTaGACCAAACGGTTCTATCTC +
Preference number: 2 (lower is better)
Translates to: DWQNQGTALDAFHGVVPVNTVPH*TKRFYL
Trigger: GAGATAGAACCGTTTGGTTCAATGAGGGACTGTGTT...AACTGGCACCACTCCATGGAAAGCGTCTAGGGCAGTGCCTTGGTTCTGCCAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR TCA 90 bp CACATTCCGCCTTCCAAGTTTCTAAACCAGAAACACCTGCGTTTTGAAACAGGTGCCCAAGGGAGTGGCTaGGTCAGCCTTAGAGGCCAT +
Preference number: 2 (lower is better)
Translates to: HIPPSKFLNQKHLRFETGAQGSG*VSLRGH
Trigger: ATGGCCTCTAAGGCTGACTCAGCCACTCCCTTGGGC...ACCTGTTTCAAAACGCAGGTGTTTCTGGTTTAGAAACTTGGAAGGCGGAATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp AAAGACAAGGCATGGCTGACTCTCCAGGTTACAGCTGGAGAAGAGGGGAAAGGTTTCGGGTCTACCAGATaGCTTCAAGGAAAAGGCCAG +
Preference number: 2 (lower is better)
Translates to: KDKAWLTLQVTAGEEGKGFGSTR*LQGKGQ
Trigger: CTGGCCTTTTCCTTGAAGGCATCTGGTAGACCCGAA...ACCTTTCCCCTCTTCTCCAGCTGTAACCTGGAGAGTCAGCCATGCCTTGTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp GCTGGGATTATAGGTGTGAGCTACAGGTTGGCAGGTTCTACATGGGTTTCGGCTAGGGTCTCTGTTCTCTaGTGCAGCCACATTTCCAGA +
Preference number: 2 (lower is better)
Translates to: AGIIGVSYRLAGSTWVSARVSVL*CSHISR
Trigger: TCTGGAAATGTGGCTGCAGCAGAGAACAGAGACCCT...AGCCGAAACCCATGTAGAACCTGCCAACCTGTAGCTCACACCTATAATCCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp AGCCGCTTCAGAAAGATGTTCAGGAAACACCGTTGCCTGTTTGCTCAGAGTGGCCTCAGCACGGAAAACTaGATGTCAGGGTCTCTGTTC +
Preference number: 2 (lower is better)
Translates to: SRFRKMFRKHRCLFAQSGLSTEN*MSGSLF
Trigger: GAACAGAGACCCTGACATGCAGTTTTCCGTGCTGAG...GCCACTCTGAGCAAACAGGCAACGGTGTTTCCTGAACATCTTTCTGAAGCGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp CTAAAGAGCTGGGAACAGCTTCAGAGTCAGGCTCAGCCTGACTCATGCTTGACAGCTCACTGCTACCTCTaGCTTCTGGGTTCAAGTGAT +
Preference number: 2 (lower is better)
Translates to: LKSWEQLQSQAQPDSCLTAHCYL*LLGSSD
Trigger: ATCACTTGAACCCAGAAGGCAGAGGTAGCAGTGAGC...TGTCAAGCATGAGTCAGGCTGAGCCTGACTCTGAAGCTGTTCCCAGCTCTTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp GCTGGGATTATAGGTGTGAGCTACAGGTTGGCAGGTTCTACATGGGTTTCGGCTAAAAAGGCTGTCTGGTaGTTCCTTAGCAGTGCCACC +
Preference number: 2 (lower is better)
Translates to: AGIIGVSYRLAGSTWVSAKKAVW*FLSSAT
Trigger: GGTGGCACTGCTAAGGAAGCACCAGACAGCCTTTTT...AGCCGAAACCCATGTAGAACCTGCCAACCTGTAGCTCACACCTATAATCCCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp CTCAGCACGGAAAACTGCATGTCAGGGTCTCTGTTCTCTGCTGCAGCCACATTTGAGGGGAAAGGTGTTTaGTTGTACAAGCAGCTCAGG +
Preference number: 2 (lower is better)
Translates to: LSTENCMSGSLFSAAATFEGKGV*LYKQLR
Trigger: CCTGAGCTGCTTGTACAACCAAACACCTTTCCCCTC...AAATGTGGCTGCAGCAGAGAACAGAGACCCTGACATGCAGTTTTCCGTGCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp AAAGGCTGGAGCTGGGAGAACGAGAACCCTAGGAGAAAGAGAACAAGAAATTCCACCAGGTACAGTAACTaGCCCCCAGATGGCACTGGA +
Preference number: 2 (lower is better)
Translates to: KGWSWENENPRRKRTRNSTRYSN*PPDGTG
Trigger: TCCAGTGCCATCTGGGGGCCAGTTACTGTACCTGGT...GGAATTTCTTGTTCTCTTTCTCCTAGGGTTCTCGTTCTCCCAGCTCCAGCCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp CACATTCCGCCTTCCAAGTTTCTAAACCAGAAACACCTGCGTTTTGAAACAGGTTGCCTCTCCCAGCCGTaGGGAGCCGTTTGTTTAGGA +
Preference number: 2 (lower is better)
Translates to: HIPPSKFLNQKHLRFETGCLSQP*GAVCLG
Trigger: TCCTAAACAAACGGCTCCCCACGGCTGGGAGAGGCA...ACCTGTTTCAAAACGCAGGTGTTTCTGGTTTAGAAACTTGGAAGGCGGAATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp CTAAAGAGCTGGGAACAGCTTCAGAGTCAGGCTCAGCCTGACTCATGCTTGACAATTTCTAGGCTGCAATaGCATTCCTCATCGCCCATG +
Preference number: 2 (lower is better)
Translates to: LKSWEQLQSQAQPDSCLTISRLQ*HSSSPM
Trigger: CATGGGCGATGAGGAATGCCATTGCAGCCTAGAAAT...TGTCAAGCATGAGTCAGGCTGAGCCTGACTCTGAAGCTGTTCCCAGCTCTTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR TCA 90 bp AGCCGCTTCAGAAAGATGTTCAGGAAACACCGTTGCCTGTTTGCTCAGAGTGGCTCCTTGGAGGAACGCTaGCATGCTGACATTCTTTTT +
Preference number: 2 (lower is better)
Translates to: SRFRKMFRKHRCLFAQSGSLEER*HADILF
Trigger: AAAAAGAATGTCAGCATGTCAGCGTTCCTCCAAGGA...GCCACTCTGAGCAAACAGGCAACGGTGTTTCCTGAACATCTTTCTGAAGCGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp AAAGGCTGGAGCTGGGAGAACGAGAACCCTAGGAGAAAGAGAACAAGAAATTCCGCTCACTGCTACCTCTaGCTTCTGGGTTCAAGTGAT +
Preference number: 2 (lower is better)
Translates to: KGWSWENENPRRKRTRNSAHCYL*LLGSSD
Trigger: ATCACTTGAACCCAGAAGGCAGAGGTAGCAGTGAGC...GGAATTTCTTGTTCTCTTTCTCCTAGGGTTCTCGTTCTCCCAGCTCCAGCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp CACATTCCGCCTTCCAAGTTTCTAAACCAGAAACACCTGCGTTTTGAAACAGGTCCCAAAGCCACTCCTTaGAGGAACGCTGACATGCTG +
Preference number: 2 (lower is better)
Translates to: HIPPSKFLNQKHLRFETGPKATP*RNADML
Trigger: CAGCATGTCAGCGTTCCTCCAAGGAGTGGCTTTGGG...ACCTGTTTCAAAACGCAGGTGTTTCTGGTTTAGAAACTTGGAAGGCGGAATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp AAAGGCTGGAGCTGGGAGAACGAGAACCCTAGGAGAAAGAGAACAAGAAATTCCATGTGCCACCATCACTaGGCACTTAATACCTGCCTG +
Preference number: 2 (lower is better)
Translates to: KGWSWENENPRRKRTRNSMCHHH*ALNTCL
Trigger: CAGGCAGGTATTAAGTGCCCAGTGATGGTGGCACAT...GGAATTTCTTGTTCTCTTTCTCCTAGGGTTCTCGTTCTCCCAGCTCCAGCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR TCA 90 bp CCAGTCCTTATGGTATTAAGACAAGAGGAAAACTTTGGTCTTGAACTACCCGGCCAAAATGTCTGCATCTaGCAAATCCCCGCCTCTGCG +
Preference number: 2 (lower is better)
Translates to: PVLMVLRQEENFGLELPGQNVCI*QIPASA
Trigger: CGCAGAGGCGGGGATTTGTCAGATGCAGACATTTTG...GCCGGGTAGTTCAAGACCAAAGTTTTCCTCTTGTCTTAATACCATAAGGACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR TCA 90 bp CTAAAGAGCTGGGAACAGCTTCAGAGTCAGGCTCAGCCTGACTCATGCTTGACATACCTGTTAAGTTTGTaGTACCAGAGTTGGGTCTGT +
Preference number: 2 (lower is better)
Translates to: LKSWEQLQSQAQPDSCLTYLLSL*YQSWVC
Trigger: ACAGACCCAACTCTGGTATCACAAACTTAACAGGTA...TGTCAAGCATGAGTCAGGCTGAGCCTGACTCTGAAGCTGTTCCCAGCTCTTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp CACATTCCGCCTTCCAAGTTTCTAAACCAGAAACACCTGCGTTTTGAAACAGGTATTCCTCATCGCCCATaGTGCCCTTCAAGGCGTTTC +
Preference number: 2 (lower is better)
Translates to: HIPPSKFLNQKHLRFETGIPHRP*CPSRRF
Trigger: GAAACGCCTTGAAGGGCAGCATGGGCGATGAGGAAT...ACCTGTTTCAAAACGCAGGTGTTTCTGGTTTAGAAACTTGGAAGGCGGAATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp AAAGGCTGGAGCTGGGAGAACGAGAACCCTAGGAGAAAGAGAACAAGAAATTCCAAAGTACATACATGCTaGAGGGCAAAGGTCGCAGAC +
Preference number: 2 (lower is better)
Translates to: KGWSWENENPRRKRTRNSKVHTC*RAKVAD
Trigger: GTCTGCGACCTTTGCCCTCCAGCATGTATGTACTTT...GGAATTTCTTGTTCTCTTTCTCCTAGGGTTCTCGTTCTCCCAGCTCCAGCCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR TCA 90 bp AAAGGCTGGAGCTGGGAGAACGAGAACCCTAGGAGAAAGAGAACAAGAAATTCCTCCTTGGAGGAACGCTaGCATGCTGACATTCTTTTT +
Preference number: 2 (lower is better)
Translates to: KGWSWENENPRRKRTRNSSLEER*HADILF
Trigger: AAAAAGAATGTCAGCATGTCAGCGTTCCTCCAAGGA...GGAATTTCTTGTTCTCTTTCTCCTAGGGTTCTCGTTCTCCCAGCTCCAGCCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp GTCCTTATGGTATTAAGACAAGAGGAAAACTTTGGTCTTGAACTACCCGGCAGCACTACCCGGCAGCCTTaGAAAATGTCTGCATCTGAC +
Preference number: 2 (lower is better)
Translates to: VLMVLRQEENFGLELPGSTTRQP*KMSASD
Trigger: GTCAGATGCAGACATTTTGCAAGGCTGCCGGGTAGT...GCTGCCGGGTAGTTCAAGACCAAAGTTTTCCTCTTGTCTTAATACCATAAGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp CACATTCCGCCTTCCAAGTTTCTAAACCAGAAACACCTGCGTTTTGAAACAGGTGTCTCTGTTCTCTGCTaGAGCCACATTTCCAGAGAC +
Preference number: 2 (lower is better)
Translates to: HIPPSKFLNQKHLRFETGVSVLC*SHISRD
Trigger: GTCTCTGGAAATGTGGCTGCAGCAGAGAACAGAGAC...ACCTGTTTCAAAACGCAGGTGTTTCTGGTTTAGAAACTTGGAAGGCGGAATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp CACATTCCGCCTTCCAAGTTTCTAAACCAGAAACACCTGCGTTTTGAAACAGGTTCGCAGACAAATGTCTaGAGGGGACACAAAGGACGA +
Preference number: 2 (lower is better)
Translates to: HIPPSKFLNQKHLRFETGSQTNV*RGHKGR
Trigger: TCGTCCTTTGTGTCCCCTGCAGACATTTGTCTGCGA...ACCTGTTTCAAAACGCAGGTGTTTCTGGTTTAGAAACTTGGAAGGCGGAATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp CACATTCCGCCTTCCAAGTTTCTAAACCAGAAACACCTGCGTTTTGAAACAGGTGCTCACTGCTACCTCTaGCTTCTGGGTTCAAGTGAT +
Preference number: 2 (lower is better)
Translates to: HIPPSKFLNQKHLRFETGAHCYL*LLGSSD
Trigger: ATCACTTGAACCCAGAAGGCAGAGGTAGCAGTGAGC...ACCTGTTTCAAAACGCAGGTGTTTCTGGTTTAGAAACTTGGAAGGCGGAATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR TCA 90 bp AAAGGCTGGAGCTGGGAGAACGAGAACCCTAGGAGAAAGAGAACAAGAAATTCCGATGTGATCAGAGCATaGAGAAGCCCAGTGATTTTT +
Preference number: 2 (lower is better)
Translates to: KGWSWENENPRRKRTRNSDVIRA*RSPVIF
Trigger: AAAAATCACTGGGCTTCTTCATGCTCTGATCACATC...GGAATTTCTTGTTCTCTTTCTCCTAGGGTTCTCGTTCTCCCAGCTCCAGCCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR GCA 90 bp CACATTCCGCCTTCCAAGTTTCTAAACCAGAAACACCTGCGTTTTGAAACAGGTGGCGTTTCTACAGGCTaGAGGAAAGTACATACATGC +
Preference number: 2 (lower is better)
Translates to: HIPPSKFLNQKHLRFETGGVSTG*RKVHTC
Trigger: GCATGTATGTACTTTCCTGCAGCCTGTAGAAACGCC...ACCTGTTTCAAAACGCAGGTGTTTCTGGTTTAGAAACTTGGAAGGCGGAATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CCA 90 bp CACATTCCGCCTTCCAAGTTTCTAAACCAGAAACACCTGCGTTTTGAAACAGGTAAAGTACATACATGCTaGAGGGCAAAGGTCGCAGAC +
Preference number: 2 (lower is better)
Translates to: HIPPSKFLNQKHLRFETGKVHTC*RAKVAD
Trigger: GTCTGCGACCTTTGCCCTCCAGCATGTATGTACTTT...ACCTGTTTCAAAACGCAGGTGTTTCTGGTTTAGAAACTTGGAAGGCGGAATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CAA 90 bp AGCGCCAGGCAGAGGCACCCTGCGCTCTCGGGGCGGAGCCCCATGGCGGCGTGTCCAGGCTGCCCACCATaGGAAACATCCCCCAGGGCC +
Preference number: 3 (lower is better)
Translates to: SARQRHPALSGRSPMAACPGCPP*ETSPRA
Trigger: GGCCCTGGGGGATGTTTCCAATGGTGGGCAGCCTGG...ACACGCCGCCATGGGGCTCCGCCCCGAGAGCGCAGGGTGCCTCTGCCTGGCGCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CAA 90 bp AGCGCCAGGCAGAGGCACCCTGCGCTCTCGGGGCGGAGCCCCATGGCGGCGTGTCCGTCCAGCTGGACCTaGAGCTTGTGGAGCTCCTCG +
Preference number: 3 (lower is better)
Translates to: SARQRHPALSGRSPMAACPSSWT*SLWSSS
Trigger: CGAGGAGCTCCACAAGCTCAAGGTCCAGCTGGACGG...ACACGCCGCCATGGGGCTCCGCCCCGAGAGCGCAGGGTGCCTCTGCCTGGCGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495936.6
3UTR TCA 72 bp GGCTCTCCCAGGTCTGCCAGCCACGCATGCCGGGTCTaGGACTCCCCCGGACCGCTGGGTGCTGCTTGGAGC +
Preference number: 3 (lower is better)
Translates to: GSPRSASHACRV*DSPGPLGAAWS
Trigger: GCTCCAAGCAGCACCCAGCGGTCCGGGGGAGTCTCAGACCCGGCATGCGTGGCTGGCAGACCTGGGAGAGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR GCA 72 bp TGCCTAGGCAGGAAGTCCCCCAGGCTGTCCCCTCGCTaGCTAGGGCCATGGGCAAGCTGCACAGGCTCCGGG +
Preference number: 3 (lower is better)
Translates to: CLGRKSPRLSPR*LGPWASCTGSG
Trigger: CCCGGAGCCTGTGCAGCTTGCCCATGGCCCTAGGCAGCGAGGGGACAGCCTGGGGGACTTCCTGCCTAGGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CAA 90 bp GGCACAGTCACTGTGTGTGGTGGGACCCAGTGTCGGCTGAGAGGCCTGGAGGGGAAGGAGGGCACTCATTaGGCCTGGGCCGGCCCCTGG +
Preference number: 3 (lower is better)
Translates to: GTVTVCGGTQCRLRGLEGKEGTH*AWAGPW
Trigger: CCAGGGGCCGGCCCAGGCCAAATGAGTGCCCTCCTT...CCCCTCCAGGCCTCTCAGCCGACACTGGGTCCCACCACACACAGTGACTGTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR TCA 72 bp CCCTGGCCCCACTATCCACAGGCCAGGCCCGGCCAATaGCCTTGCCTAGGCAGGAAGTCCCCCAGGCTGTCC +
Preference number: 3 (lower is better)
Translates to: PWPHYPQARPGQ*PCLGRKSPRLS
Trigger: GGACAGCCTGGGGGACTTCCTGCCTAGGCAAGGTCATTGGCCGGGCCTGGCCTGTGGATAGTGGGGCCAGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CAA 90 bp CACGGCACAGTCACTGTGTGTGGTGGGACCCAGTGTCGGCTGAGAGGCCTGGAGAAGGAGGGCACTCATTaGGCCTGGGCCGGCCCCTGG +
Preference number: 3 (lower is better)
Translates to: HGTVTVCGGTQCRLRGLEKEGTH*AWAGPW
Trigger: CCAGGGGCCGGCCCAGGCCAAATGAGTGCCCTCCTT...CTCCAGGCCTCTCAGCCGACACTGGGTCCCACCACACACAGTGACTGTGCCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR GCA 72 bp CTCCAGGGCCAGGCAGGGAAGCACCAAGCCCTGGCGTaGACCTGCACCCACTCAAACGCCGAAGCCTTCGTG +
Preference number: 3 (lower is better)
Translates to: LQGQAGKHQALA*TCTHSNAEAFV
Trigger: CACGAAGGCTTCGGCGTTTGAGTGGGTGCAGGTGCACGCCAGGGCTTGGTGCTTCCCTGCCTGGCCCTGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR GCA 72 bp AAGCAGCTCAGGGCAGCTGGTGCTGCGGCGTGCATGTaGGGCCCGAGAGCGTGGCTTCGGGTCTACCAGATG +
Preference number: 3 (lower is better)
Translates to: KQLRAAGAAACM*GPRAWLRVYQM
Trigger: CATCTGGTAGACCCGAAGCCACGCTCTCGGGCCGCACATGCACGCCGCAGCACCAGCTGCCCTGAGCTGCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR GCA 72 bp CCCTCGGCCCCTCACAAGACCTGCAGGCTGCGCTCATaGCCGTCCAGCTGGACCTTGAGCTTGTGGAGCTCC +
Preference number: 3 (lower is better)
Translates to: PSAPHKTCRLRS*PSSWTLSLWSS
Trigger: GGAGCTCCACAAGCTCAAGGTCCAGCTGGACGGGCATGAGCGCAGCCTGCAGGTCTTGTGAGGGGCCGAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495936.6
3UTR-3UTR CAA 90 bp CCCAGGACTGATGGGCAGGTCCCGCTGGAGCCTCTTCACCGTGTCCCCGACCCAGGAACCAGCCTGGCTTaGCCCCCAACGCTCTTAGCA +
Preference number: 3 (lower is better)
Translates to: PRTDGQVPLEPLHRVPDPGTSLA*PPTLLA
Trigger: TGCTAAGAGCGTTGGGGGCAAAGCCAGGCTGGTTCC...TGGGTCGGGGACACGGTGAAGAGGCTCCAGCGGGACCTGCCCATCAGTCCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR CCA 72 bp GCCAGAACCTGCACTGCACGGCACAGTCACTGTGTGTaGTGGGACCCAGTGTCGGCTGAGAGGCCTGGAGGG +
Preference number: 3 (lower is better)
Translates to: ARTCTARHSHCV*WDPVSAERPGG
Trigger: CCCTCCAGGCCTCTCAGCCGACACTGGGTCCCACCACACACAGTGACTGTGCCGTGCAGTGCAGGTTCTGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR CCA 72 bp CCAGAGGGCGCTCCAGGAGTTTTTCAGGCCACGATGTaGGTCCCCCAGTCAGCAGATGCCACGGGAGGGCCA +
Preference number: 3 (lower is better)
Translates to: PEGAPGVFQATM*VPQSADATGGP
Trigger: TGGCCCTCCCGTGGCATCTGCTGACTGGGGGACCCACATCGTGGCCTGAAAAACTCCTGGAGCGCCCTCTGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR CCA 72 bp AAGCCAGCCTGTCCCCCATCCCACAGTACCCATGGGTaGGTGGGCCGCAGACGGGCTGTGAAAGGGGTTGAG +
Preference number: 3 (lower is better)
Translates to: KPACPPSHSTHG*VGRRRAVKGVE
Trigger: CTCAACCCCTTTCACAGCCCGTCTGCGGCCCACCCACCCATGGGTACTGTGGGATGGGGGACAGGCTGGCTT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR CCA 72 bp GGCCAGTGCAGGGTCTCTGCCCCTGACAGGCTGGGCTaGCCCCTGCAGGATGCTCCAACATCTGGAGAACGA +
Preference number: 3 (lower is better)
Translates to: GQCRVSAPDRLG*PLQDAPTSGER
Trigger: TCGTTCTCCAGATGTTGGAGCATCCTGCAGGGGCCAGCCCAGCCTGTCAGGGGCAGAGACCCTGCACTGGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CAA 90 bp AGGGCTAGACTTGGATGTGGCTCCGTCCCCACCCATGTGCCACCATCACTGGGCTTGCCCAGGCTGGTCTaGCACCCCTGGGCCCAAGTG +
Preference number: 3 (lower is better)
Translates to: RARLGCGSVPTHVPPSLGLPRLV*HPWAQV
Trigger: CACTTGGGCCCAGGGGTGCAAGACCAGCCTGGGCAA...GCCCAGTGATGGTGGCACATGGGTGGGGACGGAGCCACATCCAAGTCTAGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR TCA 72 bp TCTCGGGGCGGAGCCCCATGGCGGCGTGTCTGGACATaGGTACCCTGCCTCCATTCTAGAGATGTCCACGCC +
Preference number: 3 (lower is better)
Translates to: SRGGAPWRRVWT*VPCLHSRDVHA
Trigger: GGCGTGGACATCTCTAGAATGGAGGCAGGGTACTCATGTCCAGACACGCCGCCATGGGGCTCCGCCCCGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR TCA 72 bp ACGGCCCCAACGGGCCCCTCACTGCGCATCCAGATGTaGGTCAGGTCGGAGCTCCAGCTGATCCTCACTGCA +
Preference number: 3 (lower is better)
Translates to: TAPTGPSLRIQM*VRSELQLILTA
Trigger: TGCAGTGAGGATCAGCTGGAGCTCCGACCTGACTCACATCTGGATGCGCAGTGAGGGGCCCGTTGGGGCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR GCA 72 bp GGCCAGGCAGGGAAGCACCAAGCCCTGGCGTGCACCTaGACCCACTCAAACGCCGAAGCCTTCGTGTCATCA +
Preference number: 3 (lower is better)
Translates to: GQAGKHQALACT*THSNAEAFVSS
Trigger: TGATGACACGAAGGCTTCGGCGTTTGAGTGGGTGCAGGTGCACGCCAGGGCTTGGTGCTTCCCTGCCTGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR GCA 72 bp AGGTGTTTGGTTGTACAAGCAGCTCAGGGCAGCTGGTaGTGCGGCGTGCATGTGCGGCCCGAGAGCGTGGCT +
Preference number: 3 (lower is better)
Translates to: RCLVVQAAQGSW*CGVHVRPESVA
Trigger: AGCCACGCTCTCGGGCCGCACATGCACGCCGCAGCACCAGCTGCCCTGAGCTGCTTGTACAACCAAACACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR GCA 72 bp GTGTTTCTGCAGGGCTGGGCCCCAGGAGCCACCGCCTaGAGGGTAACATCTGCTTACCGGTGTTTGGGGTGG +
Preference number: 3 (lower is better)
Translates to: VFLQGWAPGATA*RVTSAYRCLGW
Trigger: CCACCCCAAACACCGGTAAGCAGATGTTACCCTGCAGGCGGTGGCTCCTGGGGCCCAGCCCTGCAGAAACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR GCA 72 bp TTCCTCCCAGTATCACGGCCCCAACGGGCCCCTCACTaGGCATCCAGATGTGAGTCAGGTCGGAGCTCCAGC +
Preference number: 3 (lower is better)
Translates to: FLPVSRPQRAPH*ASRCESGRSSS
Trigger: GCTGGAGCTCCGACCTGACTCACATCTGGATGCGCAGTGAGGGGCCCGTTGGGGCCGTGATACTGGGAGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR CCA 72 bp GCTGGTGCTGCGGCGTGCATGTGCGGCCCGAGAGCGTaGCTTCGGGTCTACCAGATGCCTTCAAGGAAAAGG +
Preference number: 3 (lower is better)
Translates to: AGAAACMCGPRA*LRVYQMPSRKR
Trigger: CCTTTTCCTTGAAGGCATCTGGTAGACCCGAAGCCACGCTCTCGGGCCGCACATGCACGCCGCAGCACCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR CCA 72 bp CACGAAGACCCACGGCGACACCTTACCCAACCAGGATaGGGCTGGAGAAGGCCACGCCAGGATGCTTCTGCC +
Preference number: 3 (lower is better)
Translates to: HEDPRRHLTQPG*GWRRPRQDASA
Trigger: GGCAGAAGCATCCTGGCGTGGCCTTCTCCAGCCCCATCCTGGTTGGGTAAGGTGTCGCCGTGGGTCTTCGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR CCA 72 bp CACAAGACCTGCAGGCTGCGCTCATGCCCGTCCAGCTaGACCTTGAGCTTGTGGAGCTCCTCGATCTCGCGG +
Preference number: 3 (lower is better)
Translates to: HKTCRLRSCPSS*TLSLWSSSISR
Trigger: CCGCGAGATCGAGGAGCTCCACAAGCTCAAGGTCCAGCTGGACGGGCATGAGCGCAGCCTGCAGGTCTTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495936.6
3UTR-3UTR CAA 90 bp GCACGGCACAGTCACTGTGTGTGGTGGGACCCAGTGTCGGCTGAGAGGCCTGGAGGAACCAGCCTGGCTTaGCCCCCAACGCTCTTAGCA +
Preference number: 3 (lower is better)
Translates to: ARHSHCVWWDPVSAERPGGTSLA*PPTLLA
Trigger: TGCTAAGAGCGTTGGGGGCAAAGCCAGGCTGGTTCC...TCCAGGCCTCTCAGCCGACACTGGGTCCCACCACACACAGTGACTGTGCCGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CAA 90 bp ACAGTCACTGTGTGTGGTGGGACCCAGTGTCGGCTGAGAGGCCTGGAGGGGTCTGGAACCAGCCTGGCTTaGCCCCCAACGCTCTTAGCA +
Preference number: 3 (lower is better)
Translates to: TVTVCGGTQCRLRGLEGSGTSLA*PPTLLA
Trigger: TGCTAAGAGCGTTGGGGGCAAAGCCAGGCTGGTTCC...AGACCCCTCCAGGCCTCTCAGCCGACACTGGGTCCCACCACACACAGTGACTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CAA 90 bp AGGGCAGCTGTTTTAAAAACCCGCACACAGGACAGTGGCTGTCTCTGCCGCACGAAGGAGGGCACTCATTaGGCCTGGGCCGGCCCCTGG +
Preference number: 3 (lower is better)
Translates to: RAAVLKTRTQDSGCLCRTKEGTH*AWAGPW
Trigger: CCAGGGGCCGGCCCAGGCCAAATGAGTGCCCTCCTT...CGTGCGGCAGAGACAGCCACTGTCCTGTGTGCGGGTTTTTAAAACAGCTGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CAA 90 bp GGCCCCACCAGGGCTCTGCAGCATCTGAGGCAAAAAGTCTTGGGCCGGACGAGGAGGCAGGAGGGTCGCTaGAGGCCAGAAGTTCAAGAC +
Preference number: 3 (lower is better)
Translates to: GPTRALQHLRQKVLGRTRRQEGR*RPEVQD
Trigger: GTCTTGAACTTCTGGCCTCAAGCGACCCTCCTGCCT...CCTCGTCCGGCCCAAGACTTTTTGCCTCAGATGCTGCAGAGCCCTGGTGGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CAA 90 bp AAGACCCACGGCGACACCTTACCCAACCAGGATGGGGCTGGAGAAGGCCACGCCAGGCCAGCGGATCACTaGAGGCCAGGAGTTCGAAAC +
Preference number: 3 (lower is better)
Translates to: KTHGDTLPNQDGAGEGHARPADH*RPGVRN
Trigger: GTTTCGAACTCCTGGCCTCAAGTGATCCGCTGGCCT...GGCGTGGCCTTCTCCAGCCCCATCCTGGTTGGGTAAGGTGTCGCCGTGGGTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CAA 90 bp AAGACCCACGGCGACACCTTACCCAACCAGGATGGGGCTGGAGAAGGCCACGCCACTTGTGTCCTGCCCTaGACAGGGGTGGGGCAGATT +
Preference number: 3 (lower is better)
Translates to: KTHGDTLPNQDGAGEGHATCVLP*TGVGQI
Trigger: AATCTGCCCCACCCCTGTCAAGGGCAGGACACAAGT...GGCGTGGCCTTCTCCAGCCCCATCCTGGTTGGGTAAGGTGTCGCCGTGGGTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR TCA 72 bp CTCAGCCTCCTCAAGGGGGCATCTGATAGATGCCCGTaGACATGTCTTCTCCGGCCTGGCCAGGCTGCCCAC +
Preference number: 3 (lower is better)
Translates to: LSLLKGASDRCP*TCLLRPGQAAH
Trigger: GTGGGCAGCCTGGCCAGGCCGGAGAAGACATGTTCACGGGCATCTATCAGATGCCCCCTTGAGGAGGCTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR GCA 72 bp GGTCTCTGGGGCAATCCTTCTCTGAACGCAAAACCCTaGCCTGGCTCTCCCAGGTCTGCCAGCCACGCATGC +
Preference number: 3 (lower is better)
Translates to: GLWGNPSLNAKP*PGSPRSASHAC
Trigger: GCATGCGTGGCTGGCAGACCTGGGAGAGCCAGGGCAGGGTTTTGCGTTCAGAGAAGGATTGCCCCAGAGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR GCA 72 bp TGGGAACAGCTTCAGAGTCAGGCTCAGCCTGACTCATaGTTGACACCCCCACGCCCAGGGAGGGTTGGGGGA +
Preference number: 3 (lower is better)
Translates to: WEQLQSQAQPDS*LTPPRPGRVGG
Trigger: TCCCCCAACCCTCCCTGGGCGTGGGGGTGTCAAGCATGAGTCAGGCTGAGCCTGACTCTGAAGCTGTTCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR CCA 72 bp GGACGTGGCTCCCAGGCCACCTTAACTTCGGCTCCCTaGTCAACTCACTTGGAGCAAGAGCACAGAGCCCGG +
Preference number: 3 (lower is better)
Translates to: GRGSQATLTSAP*STHLEQEHRAR
Trigger: CCGGGCTCTGTGCTCTTGCTCCAAGTGAGTTGACCAGGGAGCCGAAGTTAAGGTGGCCTGGGAGCCACGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CAA 90 bp AAGGAAAAGGCCAGAACCTGCACTGCACGGCACAGTCACTGTGTGTGGTGGGACCCAGGCTGCCCACCATaGGAAACATCCCCCAGGGCC +
Preference number: 3 (lower is better)
Translates to: KEKARTCTARHSHCVWWDPGCPP*ETSPRA
Trigger: GGCCCTGGGGGATGTTTCCAATGGTGGGCAGCCTGG...GTCCCACCACACACAGTGACTGTGCCGTGCAGTGCAGGTTCTGGCCTTTTCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CAA 90 bp AGGGCTAGACTTGGATGTGGCTCCGTCCCCACCCATGTGCCACCATCACTGGGCATCAGAGGGCTAGACTaGGATGTGGCTCCGTCCCCA +
Preference number: 3 (lower is better)
Translates to: RARLGCGSVPTHVPPSLGIRGLD*DVAPSP
Trigger: TGGGGACGGAGCCACATCCAAGTCTAGCCCTCTGAT...GCCCAGTGATGGTGGCACATGGGTGGGGACGGAGCCACATCCAAGTCTAGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR TCA 72 bp AAACACCGTTGCCTGTTTGCTCAGAGTGGCAGGTGGTaGGGCCGAGTCTGGTCCTCCCTCACAGGCAGGGAC +
Preference number: 3 (lower is better)
Translates to: KHRCLFAQSGRW*GRVWSSLTGRD
Trigger: GTCCCTGCCTGTGAGGGAGGACCAGACTCGGCCTCACCACCTGCCACTCTGAGCAAACAGGCAACGGTGTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR GCA 72 bp TGTGCGGCCCGAGAGCGTGGCTTCGGGTCTACCAGATaGCTTCAAGGAAAAGGCCAGAACCTGCACTGCACG +
Preference number: 3 (lower is better)
Translates to: CAARERGFGSTR*LQGKGQNLHCT
Trigger: CGTGCAGTGCAGGTTCTGGCCTTTTCCTTGAAGGCATCTGGTAGACCCGAAGCCACGCTCTCGGGCCGCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR GCA 72 bp CCCTCCCAAAAGACTCAGGCCAGAGTAAGGGCCTGCTaGCTCTCCCAGCCGTGGGGAGCCGTTTGTTTAGGA +
Preference number: 3 (lower is better)
Translates to: PSQKTQARVRAC*LSQPWGAVCLG
Trigger: TCCTAAACAAACGGCTCCCCACGGCTGGGAGAGGCAGCAGGCCCTTACTCTGGCCTGAGTCTTTTGGGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR GCA 72 bp CCACCCATGTGCCACCATCACTGGGCACTTAATACCTaGCTGGATGCTGCCAGGCCAAGAGCTCTGCCTGGG +
Preference number: 3 (lower is better)
Translates to: PPMCHHHWALNT*LDAARPRALPG
Trigger: CCCAGGCAGAGCTCTTGGCCTGGCAGCATCCAGGCAGGTATTAAGTGCCCAGTGATGGTGGCACATGGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR GCA 72 bp GGTGGGCTCTGTTGTCGCTCAGCCACCCTCTGGGGCTaGCCCTTCTTTTGTTTCTGGAAAGAGAGGGCCCTG +
Preference number: 3 (lower is better)
Translates to: GGLCCRSATLWG*PFFCFWKERAL
Trigger: CAGGGCCCTCTCTTTCCAGAAACAAAAGAAGGGGCAGCCCCAGAGGGTGGCTGAGCGACAACAGAGCCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR CCA 72 bp ATGGCACTGGAGATGCGTTCCACAGTCTGGGGAGTGTaGTACTGCGTGGGCAGGGGCACAGATGGTCCAGGA +
Preference number: 3 (lower is better)
Translates to: MALEMRSTVWGV*YCVGRGTDGPG
Trigger: TCCTGGACCATCTGTGCCCCTGCCCACGCAGTACCACACTCCCCAGACTGTGGAACGCATCTCCAGTGCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR CCA 72 bp GATGTGGCTCCGTCCCCACCCATGTGCCACCATCACTaGGCACTTAATACCTGCCTGGATGCTGCCAGGCCA +
Preference number: 3 (lower is better)
Translates to: DVAPSPPMCHHH*ALNTCLDAARP
Trigger: TGGCCTGGCAGCATCCAGGCAGGTATTAAGTGCCCAGTGATGGTGGCACATGGGTGGGGACGGAGCCACATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR CCA 72 bp CTGCCCAGCCCAAGGGGCAGCCTGGCTTCTCAGGATTaGCAGAACCAAGGCACTGCCCTAGACGCTTTCCAT +
Preference number: 3 (lower is better)
Translates to: LPSPRGSLASQD*QNQGTALDAFH
Trigger: ATGGAAAGCGTCTAGGGCAGTGCCTTGGTTCTGCCAATCCTGAGAAGCCAGGCTGCCCCTTGGGCTGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CAA 90 bp GGGCAGCCTGGCTTCTCAGGATTGGCAGAACCAAGGCACTGCCCTAGACGCTTTGGAACCAGCCTGGCTTaGCCCCCAACGCTCTTAGCA +
Preference number: 3 (lower is better)
Translates to: GQPGFSGLAEPRHCPRRFGTSLA*PPTLLA
Trigger: TGCTAAGAGCGTTGGGGGCAAAGCCAGGCTGGTTCC...AAAGCGTCTAGGGCAGTGCCTTGGTTCTGCCAATCCTGAGAAGCCAGGCTGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CAA 90 bp GACAAGGCATGGCTGACTCTCCAGGTTACAGCTGGAGAAGAGGGGAAAGGTGTTAAGGAGGGCACTCATTaGGCCTGGGCCGGCCCCTGG +
Preference number: 3 (lower is better)
Translates to: DKAWLTLQVTAGEEGKGVKEGTH*AWAGPW
Trigger: CCAGGGGCCGGCCCAGGCCAAATGAGTGCCCTCCTT...AACACCTTTCCCCTCTTCTCCAGCTGTAACCTGGAGAGTCAGCCATGCCTTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR TCA 72 bp AAAGAGCTGGGAACAGCTTCAGAGTCAGGCTCAGCCTaGCTCATGCTTGACACCCCCACGCCCAGGGAGGGT +
Preference number: 3 (lower is better)
Translates to: KELGTASESGSA*LMLDTPTPREG
Trigger: ACCCTCCCTGGGCGTGGGGGTGTCAAGCATGAGTCAGGCTGAGCCTGACTCTGAAGCTGTTCCCAGCTCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR GCA 72 bp GATGTGAGTCAGGTCGGAGCTCCAGCTGATCCTCACTaGACTGGAGCAGATAAGCCAGCCCAGGGGTCCACT +
Preference number: 3 (lower is better)
Translates to: DVSQVGAPADPH*TGADKPAQGST
Trigger: AGTGGACCCCTGGGCTGGCTTATCTGCTCCAGTGCAGTGAGGATCAGCTGGAGCTCCGACCTGACTCACATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR CCA 72 bp GGCCACTCAGCACCCATGAAGTCCACCACGGGTCTCTaGGGCAATCCTTCTCTGAACGCAAAACCCTGCCCT +
Preference number: 3 (lower is better)
Translates to: GHSAPMKSTTGL*GNPSLNAKPCP
Trigger: AGGGCAGGGTTTTGCGTTCAGAGAAGGATTGCCCCAGAGACCCGTGGTGGACTTCATGGGTGCTGAGTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR CCA 72 bp CAGGCTGGGCTGGCCCCTGCAGGATGCTCCAACATCTaGAGAACGATGCACATAGAGACTTGGAGGGGAGAG +
Preference number: 3 (lower is better)
Translates to: QAGLAPAGCSNI*RTMHIETWRGE
Trigger: CTCTCCCCTCCAAGTCTCTATGTGCATCGTTCTCCAGATGTTGGAGCATCCTGCAGGGGCCAGCCCAGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CAA 90 bp GTGTCCCCGACCCAGGAAACCCCGAGGCCAAGGAACCAGCCTGGCTTTGCCCCCCAACACAGTCCCTCATaGAACCAAACGGTTCTATCT +
Preference number: 3 (lower is better)
Translates to: VSPTQETPRPRNQPGFAPQHSPS*NQTVLS
Trigger: AGATAGAACCGTTTGGTTCAATGAGGGACTGTGTTG...GGGGGCAAAGCCAGGCTGGTTCCTTGGCCTCGGGGTTTCCTGGGTCGGGGACAC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CAA 90 bp ACATCTGCTTACCGGTGTTTGGGGTGGCCATTTCCGCATCCATCAGACACTTTCAAGGAGGGCACTCATTaGGCCTGGGCCGGCCCCTGG +
Preference number: 3 (lower is better)
Translates to: TSAYRCLGWPFPHPSDTFKEGTH*AWAGPW
Trigger: CCAGGGGCCGGCCCAGGCCAAATGAGTGCCCTCCTT...GAAAGTGTCTGATGGATGCGGAAATGGCCACCCCAAACACCGGTAAGCAGATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CAA 90 bp GCTACAGGTTGGCAGGTTCTACATGGGTTTCGGCTCCTGTGTGGGCCTTGCCCTATCAGAGGGCTAGACTaGGATGTGGCTCCGTCCCCA +
Preference number: 3 (lower is better)
Translates to: ATGWQVLHGFRLLCGPCPIRGLD*DVAPSP
Trigger: TGGGGACGGAGCCACATCCAAGTCTAGCCCTCTGAT...AGGGCAAGGCCCACACAGGAGCCGAAACCCATGTAGAACCTGCCAACCTGTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CAA 90 bp ACAGTCACTGTGTGTGGTGGGACCCAGTGTCGGCTGAGAGGCCTGGAGGGGTCTAGGAAAACTTTGGTCTaGAACTACCCGGCAGCCTTG +
Preference number: 3 (lower is better)
Translates to: TVTVCGGTQCRLRGLEGSRKTLV*NYPAAL
Trigger: CAAGGCTGCCGGGTAGTTCAAGACCAAAGTTTTCCT...AGACCCCTCCAGGCCTCTCAGCCGACACTGGGTCCCACCACACACAGTGACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CAA 90 bp GTCCTTCCATGCTGGCCCTTCCAGCACTCCTGCAGAGCACACTTTAGGAAACTCGGAACCAGCCTGGCTTaGCCCCCAACGCTCTTAGCA +
Preference number: 3 (lower is better)
Translates to: VLPCWPFQHSCRAHFRKLGTSLA*PPTLLA
Trigger: TGCTAAGAGCGTTGGGGGCAAAGCCAGGCTGGTTCC...GAGTTTCCTAAAGTGTGCTCTGCAGGAGTGCTGGAAGGGCCAGCATGGAAGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CAA 90 bp ACATCTGCTTACCGGTGTTTGGGGTGGCCATTTCCGCATCCATCAGACACTTTCCCAGGCTGCCCACCATaGGAAACATCCCCCAGGGCC +
Preference number: 3 (lower is better)
Translates to: TSAYRCLGWPFPHPSDTFPGCPP*ETSPRA
Trigger: GGCCCTGGGGGATGTTTCCAATGGTGGGCAGCCTGG...GAAAGTGTCTGATGGATGCGGAAATGGCCACCCCAAACACCGGTAAGCAGATGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CAA 90 bp GAGTCACTGCGCCCGGCCCCAGTGACTATTTATGAGAACAAAAGACAAGGCATGGCCCGGCCAATGACCTaGCCTAGGCAGGAAGTCCCC +
Preference number: 3 (lower is better)
Translates to: ESLRPAPVTIYENKRQGMARPMT*PRQEVP
Trigger: GGGGACTTCCTGCCTAGGCAAGGTCATTGGCCGGGC...CATGCCTTGTCTTTTGTTCTCATAAATAGTCACTGGGGCCGGGCGCAGTGACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CAA 90 bp ACATCTGCTTACCGGTGTTTGGGGTGGCCATTTCCGCATCCATCAGACACTTTCTTGCCCAGGCTGGTCTaGCACCCCTGGGCCCAAGTG +
Preference number: 3 (lower is better)
Translates to: TSAYRCLGWPFPHPSDTFLPRLV*HPWAQV
Trigger: CACTTGGGCCCAGGGGTGCAAGACCAGCCTGGGCAA...GAAAGTGTCTGATGGATGCGGAAATGGCCACCCCAAACACCGGTAAGCAGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CAA 90 bp GCTGGGATTATAGGTGTGAGCTACAGGTTGGCAGGTTCTACATGGGTTTCGGCTTTGCCCAGGCTGGTCTaGCACCCCTGGGCCCAAGTG +
Preference number: 3 (lower is better)
Translates to: AGIIGVSYRLAGSTWVSALPRLV*HPWAQV
Trigger: CACTTGGGCCCAGGGGTGCAAGACCAGCCTGGGCAA...AGCCGAAACCCATGTAGAACCTGCCAACCTGTAGCTCACACCTATAATCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CAA 90 bp AGGTTTCCTCTCCCGGCCACCATGGCCCTACCAATGGTCACTGCTATTCCCACAATCAGAGGGCTAGACTaGGATGTGGCTCCGTCCCCA +
Preference number: 3 (lower is better)
Translates to: RFPLPATMALPMVTAIPTIRGLD*DVAPSP
Trigger: TGGGGACGGAGCCACATCCAAGTCTAGCCCTCTGAT...TGTGGGAATAGCAGTGACCATTGGTAGGGCCATGGTGGCCGGGAGAGGAAACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR TCA 72 bp TTGAACTACCCGGCAGCCTTGCAAAATGTCTGCATCTaGCAAATCCCCGCCTCTGCGGACTCCCGGGCACAG +
Preference number: 3 (lower is better)
Translates to: LNYPAALQNVCI*QIPASADSRAQ
Trigger: CTGTGCCCGGGAGTCCGCAGAGGCGGGGATTTGTCAGATGCAGACATTTTGCAAGGCTGCCGGGTAGTTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR GCA 72 bp GGGCTAGACTTGGATGTGGCTCCGTCCCCACCCATGTaGCACCATCACTGGGCACTTAATACCTGCCTGGAT +
Preference number: 3 (lower is better)
Translates to: GLDLDVAPSPPM*HHHWALNTCLD
Trigger: ATCCAGGCAGGTATTAAGTGCCCAGTGATGGTGGCACATGGGTGGGGACGGAGCCACATCCAAGTCTAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR GCA 72 bp TCCTCTCCCGGCCACCATGGCCCTACCAATGGTCACTaGTATTCCCACAGCAATGGTTTGCCTCATGCCTCG +
Preference number: 3 (lower is better)
Translates to: SSPGHHGPTNGH*YSHSNGLPHAS
Trigger: CGAGGCATGAGGCAAACCATTGCTGTGGGAATAGCAGTGACCATTGGTAGGGCCATGGTGGCCGGGAGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR GCA 72 bp CAGCCTGGCTTCTCAGGATTGGCAGAACCAAGGCACTaGCCTAGACGCTTTCCATGGAGTGGTGCCAGTTGC +
Preference number: 3 (lower is better)
Translates to: QPGFSGLAEPRH*PRRFPWSGASC
Trigger: GCAACTGGCACCACTCCATGGAAAGCGTCTAGGGCAGTGCCTTGGTTCTGCCAATCCTGAGAAGCCAGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR GCA 72 bp TCCTCCCTCACAGGCAGGGACAGGAGCCAAGCTCCATaGAAAGCCCATTCTCTGGGGTTATTCCTGCCTCGA +
Preference number: 3 (lower is better)
Translates to: SSLTGRDRSQAP*KAHSLGLFLPR
Trigger: TCGAGGCAGGAATAACCCCAGAGAATGGGCTTTGCATGGAGCTTGGCTCCTGTCCCTGCCTGTGAGGGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR CCA 72 bp GGGCTGCAGCTGAGTCAGGATCCACTCAGGCTTACGTaGTCTGGTCCTCAGCAGACCCTTCCTAGAAGACAC +
Preference number: 3 (lower is better)
Translates to: GLQLSQDPLRLT*SGPQQTLPRRH
Trigger: GTGTCTTCTAGGAAGGGTCTGCTGAGGACCAGACCACGTAAGCCTGAGTGGATCCTGACTCAGCTGCAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR CCA 72 bp TGTCCAGGTGGGCTCTGTTGTCGCTCAGCCACCCTCTaGGGCTGCCCCTTCTTTTGTTTCTGGAAAGAGAGG +
Preference number: 3 (lower is better)
Translates to: CPGGLCCRSATL*GCPFFCFWKER
Trigger: CCTCTCTTTCCAGAAACAAAAGAAGGGGCAGCCCCAGAGGGTGGCTGAGCGACAACAGAGCCCACCTGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR CCA 72 bp TACAGTCACCCCCAGAACCCTCTGGGAGCTGTCAGATaGCAGAGCCGTGCACTGTCTGTAAAGCAGCATCCC +
Preference number: 3 (lower is better)
Translates to: YSHPQNPLGAVR*QSRALSVKQHP
Trigger: GGGATGCTGCTTTACAGACAGTGCACGGCTCTGCCATCTGACAGCTCCCAGAGGGTTCTGGGGGTGACTGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CAA 90 bp AAGGGAGTGGCTGAGTCAGCCTTAGAGGCCATTCTGTGGCCGAGAGCTGGAGGCAGGAAAACTTTGGTCTaGAACTACCCGGCAGCCTTG +
Preference number: 3 (lower is better)
Translates to: KGVAESALEAILWPRAGGRKTLV*NYPAAL
Trigger: CAAGGCTGCCGGGTAGTTCAAGACCAAAGTTTTCCT...GCCTCCAGCTCTCGGCCACAGAATGGCCTCTAAGGCTGACTCAGCCACTCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CAA 90 bp CACGGCACAGTCACTGTGTGTGGTGGGACCCAGTGTCGGCTGAGAGGCCTGGAGCTGGGAAAAGAGAATTaGAGCCTAGCGTACTTTGCA +
Preference number: 3 (lower is better)
Translates to: HGTVTVCGGTQCRLRGLELGKEN*SLAYFA
Trigger: TGCAAAGTACGCTAGGCTCAAATTCTCTTTTCCCAG...CTCCAGGCCTCTCAGCCGACACTGGGTCCCACCACACACAGTGACTGTGCCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CAA 90 bp GATTGGCAGAACCAAGGCACTGCCCTAGACGCTTTCCATGGAGTGGTGCCAGTTTGCAGTGGCACCATCTaGGCTCACTGCTACCTCTGC +
Preference number: 3 (lower is better)
Translates to: DWQNQGTALDAFHGVVPVCSGTI*AHCYLC
Trigger: GCAGAGGTAGCAGTGAGCCAAGATGGTGCCACTGCA...AACTGGCACCACTCCATGGAAAGCGTCTAGGGCAGTGCCTTGGTTCTGCCAATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CAA 90 bp ACATCTGCTTACCGGTGTTTGGGGTGGCCATTTCCGCATCCATCAGACACTTTCGCCGTGGGGAGCCGTTaGTTTAGGAGAGCCAGCCTG +
Preference number: 3 (lower is better)
Translates to: TSAYRCLGWPFPHPSDTFAVGSR*FRRASL
Trigger: CAGGCTGGCTCTCCTAAACAAACGGCTCCCCACGGC...GAAAGTGTCTGATGGATGCGGAAATGGCCACCCCAAACACCGGTAAGCAGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CAA 90 bp GCTACAGGTTGGCAGGTTCTACATGGGTTTCGGCTCCTGTGTGGGCCTTGCCCTAGGCAAGATAATTGCTaGAACCTGGGAGGCGGAGGT +
Preference number: 3 (lower is better)
Translates to: ATGWQVLHGFRLLCGPCPRQDNC*NLGGGG
Trigger: ACCTCCGCCTCCCAGGTTCAAGCAATTATCTTGCCT...AGGGCAAGGCCCACACAGGAGCCGAAACCCATGTAGAACCTGCCAACCTGTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CAA 90 bp CTTAACTTCGGCTCCCTGGTCAACTCACTTGGAGCAAGAGCACAGAGCCCGGCTAACACCGTTGCCTGTTaGCTCAGAGTGGCAGGTGGT +
Preference number: 3 (lower is better)
Translates to: LNFGSLVNSLGARAQSPANTVAC*LRVAGG
Trigger: ACCACCTGCCACTCTGAGCAAACAGGCAACGGTGTT...AGCCGGGCTCTGTGCTCTTGCTCCAAGTGAGTTGACCAGGGAGCCGAAGTTAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR GCA 72 bp ACCAGATGCCTTCAAGGAAAAGGCCAGAACCTGCACTaGACGGCACAGTCACTGTGTGTGGTGGGACCCAGT +
Preference number: 3 (lower is better)
Translates to: TRCLQGKGQNLH*TAQSLCVVGPS
Trigger: ACTGGGTCCCACCACACACAGTGACTGTGCCGTGCAGTGCAGGTTCTGGCCTTTTCCTTGAAGGCATCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR GCA 72 bp CCGCATCCATCAGACACTTTCCTCAGCAGACCAGGCTaGCCACTCTCATGCTCTTGGAGCTTCAAGCAAGGG +
Preference number: 3 (lower is better)
Translates to: PHPSDTFLSRPG*PLSCSWSFKQG
Trigger: CCCTTGCTTGAAGCTCCAAGAGCATGAGAGTGGGCAGCCTGGTCTGCTGAGGAAAGTGTCTGATGGATGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR CCA 72 bp GAGGCCTGGAGGGGTCTTGCCTCCCTTGTAGTCACTTaGTGTCATAACAAGGAGGGCACTCATTTGGCCTGG +
Preference number: 3 (lower is better)
Translates to: EAWRGLASLVVT*CHNKEGTHLAW
Trigger: CCAGGCCAAATGAGTGCCCTCCTTGTTATGACACCAAGTGACTACAAGGGAGGCAAGACCCCTCCAGGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR CCA 72 bp AGCAAAGAAATCTCCCTCCCTGGGGTCCTTCCATGCTaGCCCTTCCAGCACTCCTGCAGAGCACACTTTAGG +
Preference number: 3 (lower is better)
Translates to: SKEISLPGVLPC*PFQHSCRAHFR
Trigger: CCTAAAGTGTGCTCTGCAGGAGTGCTGGAAGGGCCAGCATGGAAGGACCCCAGGGAGGGAGATTTCTTTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR CCA 72 bp GTAGTCCCAGCTACTCGAAAGGCTGAGGCGGGAGGATaGCTTTACCACCATGTCAAGGCTGCAGTGAGCTCA +
Preference number: 3 (lower is better)
Translates to: VVPATRKAEAGG*LYHHVKAAVSS
Trigger: TGAGCTCACTGCAGCCTTGACATGGTGGTAAAGCCATCCTCCCGCCTCAGCCTTTCGAGTAGCTGGGACTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CAA 90 bp CTAAAGAGCTGGGAACAGCTTCAGAGTCAGGCTCAGCCTGACTCATGCTTGACAGGAACCAGCCTGGCTTaGCCCCCAACGCTCTTAGCA +
Preference number: 3 (lower is better)
Translates to: LKSWEQLQSQAQPDSCLTGTSLA*PPTLLA
Trigger: TGCTAAGAGCGTTGGGGGCAAAGCCAGGCTGGTTCC...TGTCAAGCATGAGTCAGGCTGAGCCTGACTCTGAAGCTGTTCCCAGCTCTTTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CAA 90 bp GGGCAGCCTGGCTTCTCAGGATTGGCAGAACCAAGGCACTGCCCTAGACGCTTTAGAGGGGAAAGGTGTTaGGTTGTACAAGCAGCTCAG +
Preference number: 3 (lower is better)
Translates to: GQPGFSGLAEPRHCPRRFRGERC*VVQAAQ
Trigger: CTGAGCTGCTTGTACAACCAAACACCTTTCCCCTCT...AAAGCGTCTAGGGCAGTGCCTTGGTTCTGCCAATCCTGAGAAGCCAGGCTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CAA 90 bp GCTACAGGTTGGCAGGTTCTACATGGGTTTCGGCTCCTGTGTGGGCCTTGCCCTTCCCACAGCAATGGTTaGCCTCATGCCTCGAAACTA +
Preference number: 3 (lower is better)
Translates to: ATGWQVLHGFRLLCGPCPSHSNG*PHASKL
Trigger: TAGTTTCGAGGCATGAGGCAAACCATTGCTGTGGGA...AGGGCAAGGCCCACACAGGAGCCGAAACCCATGTAGAACCTGCCAACCTGTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR TCA 72 bp GGGAGCCGTTTGTTTAGGAGAGCCAGCCTGTCTTCTTaGCCCAAAGCCACTCCTTGGAGGAACGCTGACATG +
Preference number: 3 (lower is better)
Translates to: GSRLFRRASLSS*PKATPWRNADM
Trigger: CATGTCAGCGTTCCTCCAAGGAGTGGCTTTGGGTCAAGAAGACAGGCTGGCTCTCCTAAACAAACGGCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR TCA 72 bp GCTTTCCATGGAGTGGTGCCAGTTGCTTGGCACACCTaGTTCCTAGCAGCCTCTAGGGTGAAGTGCCAGAGT +
Preference number: 3 (lower is better)
Translates to: AFHGVVPVAWHT*FLAASRVKCQS
Trigger: ACTCTGGCACTTCACCCTAGAGGCTGCTAGGAATCAGGTGTGCCAAGCAACTGGCACCACTCCATGGAAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR TCA 72 bp ACTCTCATGCTCTTGGAGCTTCAAGCAAGGGGATGGTaGGGCATGGGACTGGGACACGCCCAAATAGGGAAG +
Preference number: 3 (lower is better)
Translates to: TLMLLELQARGW*GMGLGHAQIGK
Trigger: CTTCCCTATTTGGGCGTGTCCCAGTCCCATGCCTCACCATCCCCTTGCTTGAAGCTCCAAGAGCATGAGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR TCA 72 bp ACGATGCACATAGAGACTTGGAGGGGAGAGGCCTCGTaGGGCTTGGGGATGCTGTGGAGCAAAGAAATCTCC +
Preference number: 3 (lower is better)
Translates to: TMHIETWRGEAS*GLGMLWSKEIS
Trigger: GGAGATTTCTTTGCTCCACAGCATCCCCAAGCCTCACGAGGCCTCTCCCCTCCAAGTCTCTATGTGCATCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR GCA 72 bp TGGCTGTCTCTGCCGCACGTGATCTACATAACGCCATaGATAGATCATCAGCACGAGGCAGGTAAGGGCTGC +
Preference number: 3 (lower is better)
Translates to: WLSLPHVIYITP*IDHQHEAGKGC
Trigger: GCAGCCCTTACCTGCCTCGTGCTGATGATCTATGCATGGCGTTATGTAGATCACGTGCGGCAGAGACAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR CCA 72 bp TTGGCAGAACCAAGGCACTGCCCTAGACGCTTTCCATaGAGTGGTGCCAGTTGCTTGGCACACCTGATTCCT +
Preference number: 3 (lower is better)
Translates to: LAEPRHCPRRFP*SGASCLAHLIP
Trigger: AGGAATCAGGTGTGCCAAGCAACTGGCACCACTCCATGGAAAGCGTCTAGGGCAGTGCCTTGGTTCTGCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR CCA 72 bp ATTATAGGTGTGAGCTACAGGTTGGCAGGTTCTACATaGGTTTCGGCTCCTGTGTGGGCCTTGCCCTCCTGG +
Preference number: 3 (lower is better)
Translates to: IIGVSYRLAGST*VSAPVWALPSW
Trigger: CCAGGAGGGCAAGGCCCACACAGGAGCCGAAACCCATGTAGAACCTGCCAACCTGTAGCTCACACCTATAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR CCA 72 bp GCCTGCAGGGTAACATCTGCTTACCGGTGTTTGGGGTaGCCATTTCCGCATCCATCAGACACTTTCCTCAGC +
Preference number: 3 (lower is better)
Translates to: ACRVTSAYRCLG*PFPHPSDTFLS
Trigger: GCTGAGGAAAGTGTCTGATGGATGCGGAAATGGCCACCCCAAACACCGGTAAGCAGATGTTACCCTGCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CAA 90 bp AGGGCAGCTGTTTTAAAAACCCGCACACAGGACAGTGGCTGTCTCTGCCGCACGAGAGGGGAAAGGTGTTaGGTTGTACAAGCAGCTCAG +
Preference number: 3 (lower is better)
Translates to: RAAVLKTRTQDSGCLCRTRGERC*VVQAAQ
Trigger: CTGAGCTGCTTGTACAACCAAACACCTTTCCCCTCT...CGTGCGGCAGAGACAGCCACTGTCCTGTGTGCGGGTTTTTAAAACAGCTGCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CAA 90 bp GCTGGGATTATAGGTGTGAGCTACAGGTTGGCAGGTTCTACATGGGTTTCGGCTAGGCAGGAGGGTCGCTaGAGGCCAGAAGTTCAAGAC +
Preference number: 3 (lower is better)
Translates to: AGIIGVSYRLAGSTWVSARQEGR*RPEVQD
Trigger: GTCTTGAACTTCTGGCCTCAAGCGACCCTCCTGCCT...AGCCGAAACCCATGTAGAACCTGCCAACCTGTAGCTCACACCTATAATCCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CAA 90 bp CTAAAGAGCTGGGAACAGCTTCAGAGTCAGGCTCAGCCTGACTCATGCTTGACACCCTGGTCAACTCACTaGGAGCAAGAGCACAGAGCC +
Preference number: 3 (lower is better)
Translates to: LKSWEQLQSQAQPDSCLTPWSTH*EQEHRA
Trigger: GGCTCTGTGCTCTTGCTCCAAGTGAGTTGACCAGGG...TGTCAAGCATGAGTCAGGCTGAGCCTGACTCTGAAGCTGTTCCCAGCTCTTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR GCA 72 bp TTTCTAGGCTGCAATGGCATTCCTCATCGCCCATGCTaGCCTTCAAGGCGTTTCTGCAGCTCCAACAACAGC +
Preference number: 3 (lower is better)
Translates to: FLGCNGIPHRPC*PSRRFCSSNNS
Trigger: GCTGTTGTTGGAGCTGCAGAAACGCCTTGAAGGGCAGCATGGGCGATGAGGAATGCCATTGCAGCCTAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CAA 90 bp ATCCAGGGCAGCTGTTTTAAAAACCCGCACACAGGACAGTGGCTGTCTCTGCCGAGGAAAACTTTGGTCTaGAACTACCCGGCAGCCTTG +
Preference number: 3 (lower is better)
Translates to: IQGSCFKNPHTGQWLSLPRKTLV*NYPAAL
Trigger: CAAGGCTGCCGGGTAGTTCAAGACCAAAGTTTTCCT...CGGCAGAGACAGCCACTGTCCTGTGTGCGGGTTTTTAAAACAGCTGCCCTGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CAA 90 bp GGGCAGCCTGGCTTCTCAGGATTGGCAGAACCAAGGCACTGCCCTAGACGCTTTCTGGGAAAAGAGAATTaGAGCCTAGCGTACTTTGCA +
Preference number: 3 (lower is better)
Translates to: GQPGFSGLAEPRHCPRRFLGKEN*SLAYFA
Trigger: TGCAAAGTACGCTAGGCTCAAATTCTCTTTTCCCAG...AAAGCGTCTAGGGCAGTGCCTTGGTTCTGCCAATCCTGAGAAGCCAGGCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CAA 90 bp CTGCGCCCGGCCACTAGCACAGTTATAGTTCACTGCAGCCTCTACTTCCCAGGCCTGGGAAAAGAGAATTaGAGCCTAGCGTACTTTGCA +
Preference number: 3 (lower is better)
Translates to: LRPATSTVIVHCSLYFPGLGKEN*SLAYFA
Trigger: TGCAAAGTACGCTAGGCTCAAATTCTCTTTTCCCAG...GCCTGGGAAGTAGAGGCTGCAGTGAACTATAACTGTGCTAGTGGCCGGGCGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CAA 90 bp CACATTCCGCCTTCCAAGTTTCTAAACCAGAAACACCTGCGTTTTGAAACAGGTGCCCGGCCAATGACCTaGCCTAGGCAGGAAGTCCCC +
Preference number: 3 (lower is better)
Translates to: HIPPSKFLNQKHLRFETGARPMT*PRQEVP
Trigger: GGGGACTTCCTGCCTAGGCAAGGTCATTGGCCGGGC...ACCTGTTTCAAAACGCAGGTGTTTCTGGTTTAGAAACTTGGAAGGCGGAATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CAA 90 bp ATCCAGGGCAGCTGTTTTAAAAACCCGCACACAGGACAGTGGCTGTCTCTGCCGTCCCACAGCAATGGTTaGCCTCATGCCTCGAAACTA +
Preference number: 3 (lower is better)
Translates to: IQGSCFKNPHTGQWLSLPSHSNG*PHASKL
Trigger: TAGTTTCGAGGCATGAGGCAAACCATTGCTGTGGGA...CGGCAGAGACAGCCACTGTCCTGTGTGCGGGTTTTTAAAACAGCTGCCCTGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CAA 90 bp CTAAAGAGCTGGGAACAGCTTCAGAGTCAGGCTCAGCCTGACTCATGCTTGACAAGTGGTGCCAGTTGCTaGGCACACCTGATTCCTAGC +
Preference number: 3 (lower is better)
Translates to: LKSWEQLQSQAQPDSCLTSGASC*AHLIPS
Trigger: GCTAGGAATCAGGTGTGCCAAGCAACTGGCACCACT...TGTCAAGCATGAGTCAGGCTGAGCCTGACTCTGAAGCTGTTCCCAGCTCTTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CAA 90 bp CTAAAGAGCTGGGAACAGCTTCAGAGTCAGGCTCAGCCTGACTCATGCTTGACATCTGCTTACCGGTGTTaGGGGTGGCCATTTCCGCAT +
Preference number: 3 (lower is better)
Translates to: LKSWEQLQSQAQPDSCLTSAYRC*GWPFPH
Trigger: ATGCGGAAATGGCCACCCCAAACACCGGTAAGCAGA...TGTCAAGCATGAGTCAGGCTGAGCCTGACTCTGAAGCTGTTCCCAGCTCTTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR TCA 72 bp TTTGTGATACCAGAGTTGGGTCTGTCCTTGAAGCTGTaGCACGAAGACCCACGGCGACACCTTACCCAACCA +
Preference number: 3 (lower is better)
Translates to: FVIPELGLSLKL*HEDPRRHLTQP
Trigger: TGGTTGGGTAAGGTGTCGCCGTGGGTCTTCGTGTCACAGCTTCAAGGACAGACCCAACTCTGGTATCACAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR GCA 72 bp TGGTCACTGCTATTCCCACAGCAATGGTTTGCCTCATaGCTCGAAACTAGAAAGGCTGGAGCTGGGAGAACG +
Preference number: 3 (lower is better)
Translates to: WSLLFPQQWFAS*LETRKAGAGRT
Trigger: CGTTCTCCCAGCTCCAGCCTTTCTAGTTTCGAGGCATGAGGCAAACCATTGCTGTGGGAATAGCAGTGACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR GCA 72 bp GAATTTCTAGGCTGCAATGGCATTCCTCATCGCCCATaGTGCCCTTCAAGGCGTTTCTGCAGCTCCAACAAC +
Preference number: 3 (lower is better)
Translates to: EFLGCNGIPHRP*CPSRRFCSSNN
Trigger: GTTGTTGGAGCTGCAGAAACGCCTTGAAGGGCAGCATGGGCGATGAGGAATGCCATTGCAGCCTAGAAATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CAA 90 bp ACATCTGCTTACCGGTGTTTGGGGTGGCCATTTCCGCATCCATCAGACACTTTCGGGAAAGGTGTTTGGTaGTACAAGCAGCTCAGGGCA +
Preference number: 3 (lower is better)
Translates to: TSAYRCLGWPFPHPSDTFGKGVW*YKQLRA
Trigger: TGCCCTGAGCTGCTTGTACAACCAAACACCTTTCCC...GAAAGTGTCTGATGGATGCGGAAATGGCCACCCCAAACACCGGTAAGCAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CAA 90 bp GCTGGGATTATAGGTGTGAGCTACAGGTTGGCAGGTTCTACATGGGTTTCGGCTAGGCAAGATAATTGCTaGAACCTGGGAGGCGGAGGT +
Preference number: 3 (lower is better)
Translates to: AGIIGVSYRLAGSTWVSARQDNC*NLGGGG
Trigger: ACCTCCGCCTCCCAGGTTCAAGCAATTATCTTGCCT...AGCCGAAACCCATGTAGAACCTGCCAACCTGTAGCTCACACCTATAATCCCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CAA 90 bp GATTGGCAGAACCAAGGCACTGCCCTAGACGCTTTCCATGGAGTGGTGCCAGTTCAACACAGTCCCTCATaGAACCAAACGGTTCTATCT +
Preference number: 3 (lower is better)
Translates to: DWQNQGTALDAFHGVVPVQHSPS*NQTVLS
Trigger: AGATAGAACCGTTTGGTTCAATGAGGGACTGTGTTG...AACTGGCACCACTCCATGGAAAGCGTCTAGGGCAGTGCCTTGGTTCTGCCAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR TCA 72 bp CGGGAGGATGGCTTTACCACCATGTCAAGGCTGCAGTaGGCTCATGATCATACCACTGCACTTAACTTGGCA +
Preference number: 3 (lower is better)
Translates to: REDGFTTMSRLQ*AHDHTTALNLA
Trigger: TGCCAAGTTAAGTGCAGTGGTATGATCATGAGCTCACTGCAGCCTTGACATGGTGGTAAAGCCATCCTCCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR CCA 72 bp TGGCCCTACCAATGGTCACTGCTATTCCCACAGCAATaGTTTGCCTCATGCCTCGAAACTAGAAAGGCTGGA +
Preference number: 3 (lower is better)
Translates to: WPYQWSLLFPQQ*FASCLETRKAG
Trigger: TCCAGCCTTTCTAGTTTCGAGGCATGAGGCAAACCATTGCTGTGGGAATAGCAGTGACCATTGGTAGGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CAA 90 bp CTAAAGAGCTGGGAACAGCTTCAGAGTCAGGCTCAGCCTGACTCATGCTTGACAAGAAACACCTGCGTTTaGAAACAGGTGGTCAGGTAC +
Preference number: 3 (lower is better)
Translates to: LKSWEQLQSQAQPDSCLTRNTCV*KQVVRY
Trigger: GTACCTGACCACCTGTTTCAAAACGCAGGTGTTTCT...TGTCAAGCATGAGTCAGGCTGAGCCTGACTCTGAAGCTGTTCCCAGCTCTTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CAA 90 bp CACATTCCGCCTTCCAAGTTTCTAAACCAGAAACACCTGCGTTTTGAAACAGGTAGCTGGACCTTGAGCTaGTGGAGCTCCTCGATCTCG +
Preference number: 3 (lower is better)
Translates to: HIPPSKFLNQKHLRFETGSWTLS*WSSSIS
Trigger: CGAGATCGAGGAGCTCCACAAGCTCAAGGTCCAGCT...ACCTGTTTCAAAACGCAGGTGTTTCTGGTTTAGAAACTTGGAAGGCGGAATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495936.6
3UTR CCA 72 bp ACTATGGGACAAAATGTTCAGTTCCTCACCACCTGCTaGGAACTAAATCCAGGGGAACAGGAAAGGTTCGGG +
Preference number: 3 (lower is better)
Translates to: TMGQNVQFLTTC*ELNPGEQERFG
Trigger: CCCGAACCTTTCCTGTTCCCCTGGATTTAGTTCCCAGCAGGTGGTGAGGAACTGAACATTTTGTCCCATAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CAA 90 bp GCTGGGATTATAGGTGTGAGCTACAGGTTGGCAGGTTCTACATGGGTTTCGGCTCAACACAGTCCCTCATaGAACCAAACGGTTCTATCT +
Preference number: 3 (lower is better)
Translates to: AGIIGVSYRLAGSTWVSAQHSPS*NQTVLS
Trigger: AGATAGAACCGTTTGGTTCAATGAGGGACTGTGTTG...AGCCGAAACCCATGTAGAACCTGCCAACCTGTAGCTCACACCTATAATCCCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CAA 90 bp AAAGACAAGGCATGGCTGACTCTCCAGGTTACAGCTGGAGAAGAGGGGAAAGGTCAACACAGTCCCTCATaGAACCAAACGGTTCTATCT +
Preference number: 3 (lower is better)
Translates to: KDKAWLTLQVTAGEEGKGQHSPS*NQTVLS
Trigger: AGATAGAACCGTTTGGTTCAATGAGGGACTGTGTTG...ACCTTTCCCCTCTTCTCCAGCTGTAACCTGGAGAGTCAGCCATGCCTTGTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CAA 90 bp AAAGGCTGGAGCTGGGAGAACGAGAACCCTAGGAGAAAGAGAACAAGAAATTCCAGAGGGGAAAGGTGTTaGGTTGTACAAGCAGCTCAG +
Preference number: 3 (lower is better)
Translates to: KGWSWENENPRRKRTRNSRGERC*VVQAAQ
Trigger: CTGAGCTGCTTGTACAACCAAACACCTTTCCCCTCT...GGAATTTCTTGTTCTCTTTCTCCTAGGGTTCTCGTTCTCCCAGCTCCAGCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CAA 90 bp GTCCTTATGGTATTAAGACAAGAGGAAAACTTTGGTCTTGAACTACCCGGCAGCAGGAAAACTTTGGTCTaGAACTACCCGGCAGCCTTG +
Preference number: 3 (lower is better)
Translates to: VLMVLRQEENFGLELPGSRKTLV*NYPAAL
Trigger: CAAGGCTGCCGGGTAGTTCAAGACCAAAGTTTTCCT...GCTGCCGGGTAGTTCAAGACCAAAGTTTTCCTCTTGTCTTAATACCATAAGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CAA 90 bp CACATTCCGCCTTCCAAGTTTCTAAACCAGAAACACCTGCGTTTTGAAACAGGTAGAGGGGAAAGGTGTTaGGTTGTACAAGCAGCTCAG +
Preference number: 3 (lower is better)
Translates to: HIPPSKFLNQKHLRFETGRGERC*VVQAAQ
Trigger: CTGAGCTGCTTGTACAACCAAACACCTTTCCCCTCT...ACCTGTTTCAAAACGCAGGTGTTTCTGGTTTAGAAACTTGGAAGGCGGAATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR TCA 72 bp GCCTTCCAAGTTTCTAAACCAGAAACACCTGCGTTTTaGAACAGGTGGTCAGGTACTAAACGGAGAGGGTGT +
Preference number: 3 (lower is better)
Translates to: AFQVSKPETPAF*NRWSGTKRRGC
Trigger: ACACCCTCTCCGTTTAGTACCTGACCACCTGTTTCAAAACGCAGGTGTTTCTGGTTTAGAAACTTGGAAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
3UTR-3UTR CAA 90 bp TTGAACCAAACGGTTCTATCTCAGGAGAAGTCATCCAGTCCTTATGGTATTAAGAGGAAAACTTTGGTCTaGAACTACCCGGCAGCCTTG +
Preference number: 3 (lower is better)
Translates to: LNQTVLSQEKSSSPYGIKRKTLV*NYPAAL
Trigger: CAAGGCTGCCGGGTAGTTCAAGACCAAAGTTTTCCT...CTTAATACCATAAGGACTGGATGACTTCTCCTGAGATAGAACCGTTTGGTTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
CDS-3UTR TCA 90 bp AGCGCCAGGCAGAGGCACCCTGCGCTCTCGGGGCGGAGCCCCATGGCGGCGTGTCTCCCTGGGCTCAGATaGTTCTCCCACCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: SARQRHPALSGRSPMAACLPGLR*FSHLSL
Trigger: GAGGCTGAGGTGGGAGAATCATCTGAGCCCAGGGAG...ACACGCCGCCATGGGGCTCCGCCCCGAGAGCGCAGGGTGCCTCTGCCTGGCGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp CCCAGGACTGATGGGCAGGTCCCGCTGGAGCCTCTTCACCGTGTCCCCGACCCACCCCCAGTCAGCAGATaGCACGGGAGGGCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: PRTDGQVPLEPLHRVPDPPPVSR*HGRARG
Trigger: GCCCCTGGCCCTCCCGTGGCATCTGCTGACTGGGGG...TGGGTCGGGGACACGGTGAAGAGGCTCCAGCGGGACCTGCCCATCAGTCCTGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp AGCGCCAGGCAGAGGCACCCTGCGCTCTCGGGGCGGAGCCCCATGGCGGCGTGTCTGGGCATGGTAGTGTaGGCCCGTAGTCTCCCAAGT +
Preference number: 4 (lower is better)
Translates to: SARQRHPALSGRSPMAACLGMVV*ARSLPS
Trigger: ACTTGGGAGACTACGGGCGCACACTACCATGCCCAG...ACACGCCGCCATGGGGCTCCGCCCCGAGAGCGCAGGGTGCCTCTGCCTGGCGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp AGAGACCCCAGCCAGGCCACCCAGAATTCCACGGCACGGCCAACCCGGACCCCGCCCTCTGAGTCCGTGTaGCCAGGGCTCTGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: RDPSQATQNSTARPTRTPPSESV*PGLWLG
Trigger: TCCCAGCCAGAGCCCTGGCCACACGGACTCAGAGGG...CGGGGTCCGGGTTGGCCGTGCCGTGGAATTCTGGGTGGCCTGGCTGGGGTCTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp AAGACCCACGGCGACACCTTACCCAACCAGGATGGGGCTGGAGAAGGCCACGCCCCCCGGACCGCTGGGTaGTGCTTGGAGCCCCTCCTG +
Preference number: 4 (lower is better)
Translates to: KTHGDTLPNQDGAGEGHAPRTAG*CLEPLL
Trigger: CAGGAGGGGCTCCAAGCAGCACCCAGCGGTCCGGGG...GGCGTGGCCTTCTCCAGCCCCATCCTGGTTGGGTAAGGTGTCGCCGTGGGTCTT
68% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp CCCAGGACTGATGGGCAGGTCCCGCTGGAGCCTCTTCACCGTGTCCCCGACCCAAGCGGCCGCGGGTACTaGTACTGCGTCTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: PRTDGQVPLEPLHRVPDPSGRGY*YCVSSC
Trigger: GCAGCTGGAGACGCAGTACCAGTACCCGCGGCCGCT...TGGGTCGGGGACACGGTGAAGAGGCTCCAGCGGGACCTGCCCATCAGTCCTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp AGAGACCCCAGCCAGGCCACCCAGAATTCCACGGCACGGCCAACCCGGACCCCGATGGGCAGGTCCCGCTaGAGCCTCTTCACCGTGTCC +
Preference number: 4 (lower is better)
Translates to: RDPSQATQNSTARPTRTPMGRSR*SLFTVS
Trigger: GGACACGGTGAAGAGGCTCCAGCGGGACCTGCCCAT...CGGGGTCCGGGTTGGCCGTGCCGTGGAATTCTGGGTGGCCTGGCTGGGGTCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR TCA 90 bp AGCGCCAGGCAGAGGCACCCTGCGCTCTCGGGGCGGAGCCCCATGGCGGCGTGTCAAAATGTCTGCATCTaGCAAATCCCCGCCTCTGCG +
Preference number: 4 (lower is better)
Translates to: SARQRHPALSGRSPMAACQNVCI*QIPASA
Trigger: CGCAGAGGCGGGGATTTGTCAGATGCAGACATTTTG...ACACGCCGCCATGGGGCTCCGCCCCGAGAGCGCAGGGTGCCTCTGCCTGGCGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp ACAGTCACTGTGTGTGGTGGGACCCAGTGTCGGCTGAGAGGCCTGGAGGGGTCTGCTGGTGCTGCGGCGTaGATGTGCGGCCCGAGAGCG +
Preference number: 4 (lower is better)
Translates to: TVTVCGGTQCRLRGLEGSAGAAA*MCGPRA
Trigger: CGCTCTCGGGCCGCACATGCACGCCGCAGCACCAGC...AGACCCCTCCAGGCCTCTCAGCCGACACTGGGTCCCACCACACACAGTGACTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp GTGTCCCCGACCCAGGAAACCCCGAGGCCAAGGAACCAGCCTGGCTTTGCCCCCATAGGCGTGAGCCACTaGGCCCGGCCACTAGCACAG +
Preference number: 4 (lower is better)
Translates to: VSPTQETPRPRNQPGFAPIGVSH*ARPLAQ
Trigger: CTGTGCTAGTGGCCGGGCGCAGTGGCTCACGCCTAT...GGGGGCAAAGCCAGGCTGGTTCCTTGGCCTCGGGGTTTCCTGGGTCGGGGACAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp CCCAGGACTGATGGGCAGGTCCCGCTGGAGCCTCTTCACCGTGTCCCCGACCCACCTGGGGTCCTTCCATaGTGGCCCTTCCAGCACTCC +
Preference number: 4 (lower is better)
Translates to: PRTDGQVPLEPLHRVPDPPGVLP*WPFQHS
Trigger: GGAGTGCTGGAAGGGCCAGCATGGAAGGACCCCAGG...TGGGTCGGGGACACGGTGAAGAGGCTCCAGCGGGACCTGCCCATCAGTCCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp GCACGGCACAGTCACTGTGTGTGGTGGGACCCAGTGTCGGCTGAGAGGCCTGGAACTCCCCCGGACCGCTaGGTGCTGCTTGGAGCCCCT +
Preference number: 4 (lower is better)
Translates to: ARHSHCVWWDPVSAERPGTPPDR*VLLGAP
Trigger: AGGGGCTCCAAGCAGCACCCAGCGGTCCGGGGGAGT...TCCAGGCCTCTCAGCCGACACTGGGTCCCACCACACACAGTGACTGTGCCGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp CACGGCACAGTCACTGTGTGTGGTGGGACCCAGTGTCGGCTGAGAGGCCTGGAGAGGAGGGCACTCATTTaGCCTGGGCCGGCCCCTGGC +
Preference number: 4 (lower is better)
Translates to: HGTVTVCGGTQCRLRGLERRALI*PGPAPG
Trigger: GCCAGGGGCCGGCCCAGGCCAAATGAGTGCCCTCCT...CTCCAGGCCTCTCAGCCGACACTGGGTCCCACCACACACAGTGACTGTGCCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp AAGACCCACGGCGACACCTTACCCAACCAGGATGGGGCTGGAGAAGGCCACGCCAGCCCAGCCGCTAGGTaGGAGGACGTGGCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: KTHGDTLPNQDGAGEGHASPAAR*EDVAPR
Trigger: CCTGGGAGCCACGTCCTCCCACCTAGCGGCTGGGCT...GGCGTGGCCTTCTCCAGCCCCATCCTGGTTGGGTAAGGTGTCGCCGTGGGTCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp CTGGCCAGTGACCAGCGACAGGAGGCCAGAGGGCGCTCCAGGAGTTTTTCAGGCGCCCCTCACAAGACCTaGAGGCTGCGCTCATGCCCG +
Preference number: 4 (lower is better)
Translates to: LASDQRQEARGRSRSFSGAPHKT*RLRSCP
Trigger: CGGGCATGAGCGCAGCCTGCAGGTCTTGTGAGGGGC...GCCTGAAAAACTCCTGGAGCGCCCTCTGGCCTCCTGTCGCTGGTCACTGGCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp AGAGACCCCAGCCAGGCCACCCAGAATTCCACGGCACGGCCAACCCGGACCCCGGCCCCCAGATGGCACTaGAGATGCGTTCCACAGTCT +
Preference number: 4 (lower is better)
Translates to: RDPSQATQNSTARPTRTPAPRWH*RCVPQS
Trigger: AGACTGTGGAACGCATCTCCAGTGCCATCTGGGGGC...CGGGGTCCGGGTTGGCCGTGCCGTGGAATTCTGGGTGGCCTGGCTGGGGTCTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp AAGACCCACGGCGACACCTTACCCAACCAGGATGGGGCTGGAGAAGGCCACGCCGTGGGCTTGCTGGCCTaGGGCTCGGTACTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: KTHGDTLPNQDGAGEGHAVGLLA*GSVLRP
Trigger: TGGCCTCAGTACCGAGCCCCAGGCCAGCAAGCCCAC...GGCGTGGCCTTCTCCAGCCCCATCCTGGTTGGGTAAGGTGTCGCCGTGGGTCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp AGAGACCCCAGCCAGGCCACCCAGAATTCCACGGCACGGCCAACCCGGACCCCGTTTGTGATGGGGCTGTaGTGGGGGCGCTTACCTGGA +
Preference number: 4 (lower is better)
Translates to: RDPSQATQNSTARPTRTPFVMGL*WGRLPG
Trigger: TCCAGGTAAGCGCCCCCACCACAGCCCCATCACAAA...CGGGGTCCGGGTTGGCCGTGCCGTGGAATTCTGGGTGGCCTGGCTGGGGTCTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000356387.6
3UTR CAA 72 bp CCACCGGAAGTGCAGTCTTTCTCGAGGCTTGTGGGCTaGCTGGCCTGGGGCTCGGTACTGAGGCCACTGCCC +
Preference number: 4 (lower is better)
Translates to: PPEVQSFSRLVG*LAWGSVLRPLP
Trigger: GGGCAGTGGCCTCAGTACCGAGCCCCAGGCCAGCAAGCCCACAAGCCTCGAGAAAGACTGCACTTCCGGTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
CDS-3UTR TCA 90 bp CACCGTGTCCCCGACCCAGGAAACCCCGAGGCCAAGGAACCAGCCTGGCTTTGCGGTAAGGGCTGCAGCTaGGTCAGGATCCACTCAGGC +
Preference number: 4 (lower is better)
Translates to: HRVPDPGNPEAKEPAWLCGKGCS*VRIHSG
Trigger: GCCTGAGTGGATCCTGACTCAGCTGCAGCCCTTACC...GCAAAGCCAGGCTGGTTCCTTGGCCTCGGGGTTTCCTGGGTCGGGGACACGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR TCA 90 bp CTGGTGCTGCGGCGTGCATGTGCGGCCCGAGAGCGTGGCTTCGGGTCTACCAGACGGCGTGTCTGGACATaGGTACCCTGCCTCCATTCT +
Preference number: 4 (lower is better)
Translates to: LVLRRACAARERGFGSTRRRVWT*VPCLHS
Trigger: AGAATGGAGGCAGGGTACTCATGTCCAGACACGCCG...TCTGGTAGACCCGAAGCCACGCTCTCGGGCCGCACATGCACGCCGCAGCACCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp GTGTCCCCGACCCAGGAAACCCCGAGGCCAAGGAACCAGCCTGGCTTTGCCCCCTCCATCCCATCTCCTTaGGCACATCCGCAGCCAGCA +
Preference number: 4 (lower is better)
Translates to: VSPTQETPRPRNQPGFAPSIPSP*AHPQPA
Trigger: TGCTGGCTGCGGATGTGCGCAAGGAGATGGGATGGA...GGGGGCAAAGCCAGGCTGGTTCCTTGGCCTCGGGGTTTCCTGGGTCGGGGACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp AAGGGAGTGGCTGAGTCAGCCTTAGAGGCCATTCTGTGGCCGAGAGCTGGAGGCGCTGCGGCGTGCATGTaGGGCCCGAGAGCGTGGCTT +
Preference number: 4 (lower is better)
Translates to: KGVAESALEAILWPRAGGAAACM*GPRAWL
Trigger: AAGCCACGCTCTCGGGCCGCACATGCACGCCGCAGC...GCCTCCAGCTCTCGGCCACAGAATGGCCTCTAAGGCTGACTCAGCCACTCCCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp GCTACAGGTTGGCAGGTTCTACATGGGTTTCGGCTCCTGTGTGGGCCTTGCCCTCAGGGCAGCTGGTGCTaGGGCGTGCATGTGCGGCCC +
Preference number: 4 (lower is better)
Translates to: ATGWQVLHGFRLLCGPCPQGSWC*GVHVRP
Trigger: GGGCCGCACATGCACGCCGCAGCACCAGCTGCCCTG...AGGGCAAGGCCCACACAGGAGCCGAAACCCATGTAGAACCTGCCAACCTGTAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp GTGTCCCCGACCCAGGAAACCCCGAGGCCAAGGAACCAGCCTGGCTTTGCCCCCCTCAGCAGACCAGGCTaGCCACTCTCATGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: VSPTQETPRPRNQPGFAPLSRPG*PLSCSW
Trigger: CCAAGAGCATGAGAGTGGGCAGCCTGGTCTGCTGAG...GGGGGCAAAGCCAGGCTGGTTCCTTGGCCTCGGGGTTTCCTGGGTCGGGGACAC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp GCACGGCACAGTCACTGTGTGTGGTGGGACCCAGTGTCGGCTGAGAGGCCTGGAACGCCAGGATGCTTCTaGCACAGCCTGGCCCCCGTA +
Preference number: 4 (lower is better)
Translates to: ARHSHCVWWDPVSAERPGTPGCF*HSLAPV
Trigger: TACGGGGGCCAGGCTGTGGCAGAAGCATCCTGGCGT...TCCAGGCCTCTCAGCCGACACTGGGTCCCACCACACACAGTGACTGTGCCGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp AAGGAAAAGGCCAGAACCTGCACTGCACGGCACAGTCACTGTGTGTGGTGGGACGACTGCGTGGCCGCGTaGCCTGTGGCCCAGTGGCCC +
Preference number: 4 (lower is better)
Translates to: KEKARTCTARHSHCVWWDDCVAA*PVAQWP
Trigger: GGGCCACTGGGCCACAGGCCACGCGGCCACGCAGTC...GTCCCACCACACACAGTGACTGTGCCGTGCAGTGCAGGTTCTGGCCTTTTCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp GTGTCCCCGACCCAGGAAACCCCGAGGCCAAGGAACCAGCCTGGCTTTGCCCCCTGGACCTTGAGCTTGTaGAGCTCCTCGATCTCGCGG +
Preference number: 4 (lower is better)
Translates to: VSPTQETPRPRNQPGFAPWTLSL*SSSISR
Trigger: CCGCGAGATCGAGGAGCTCCACAAGCTCAAGGTCCA...GGGGGCAAAGCCAGGCTGGTTCCTTGGCCTCGGGGTTTCCTGGGTCGGGGACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp CAGCCTTGCAAAATGTCTGCATCTGACAAATCCCCGCCTCTGCGGACTCCCGGGGGCACTCATTTGGCCTaGGCCGGCCCCTGGCCCCAC +
Preference number: 4 (lower is better)
Translates to: QPCKMSASDKSPPLRTPGGTHLA*AGPWPH
Trigger: GTGGGGCCAGGGGCCGGCCCAGGCCAAATGAGTGCC...CCCGGGAGTCCGCAGAGGCGGGGATTTGTCAGATGCAGACATTTTGCAAGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp CTGCTGCCACAGCCCAAGGGAGTGGCTGAGTCAGCCTTAGAGGCCATTCTGTGGGTGTTTCTGCAGGGCTaGGCCCCAGGAGCCACCGCC +
Preference number: 4 (lower is better)
Translates to: LLPQPKGVAESALEAILWVFLQG*APGATA
Trigger: GGCGGTGGCTCCTGGGGCCCAGCCCTGCAGAAACAC...CCACAGAATGGCCTCTAAGGCTGACTCAGCCACTCCCTTGGGCTGTGGCAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp CAGGAAACCCCGAGGCCAAGGAACCAGCCTGGCTTTGCCCCCAACGCTCTTAGCTGGAGGCTGAGGGGGTaGCCTGGACCCATGTGGCCA +
Preference number: 4 (lower is better)
Translates to: QETPRPRNQPGFAPNALSWRLRG*PGPMWP
Trigger: TGGCCACATGGGTCCAGGCCACCCCCTCAGCCTCCA...GCTAAGAGCGTTGGGGGCAAAGCCAGGCTGGTTCCTTGGCCTCGGGGTTTCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR TCA 90 bp GCACGGCACAGTCACTGTGTGTGGTGGGACCCAGTGTCGGCTGAGAGGCCTGGAGCCACTCAGCACCCATaGAGTCCACCACGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: ARHSHCVWWDPVSAERPGATQHP*SPPRVS
Trigger: AGAGACCCGTGGTGGACTTCATGGGTGCTGAGTGGC...TCCAGGCCTCTCAGCCGACACTGGGTCCCACCACACACAGTGACTGTGCCGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR TCA 90 bp GCCCTGGCGTGCACCTGCACCCACTCAAACGCCGAAGCCTTCGTGTCATCACTGCAGCATCCCAGCCACTaGGCTCCCAGGAGGGCTGAA +
Preference number: 4 (lower is better)
Translates to: ALACTCTHSNAEAFVSSLQHPSH*APRRAE
Trigger: TTCAGCCCTCCTGGGAGCTCAGTGGCTGGGATGCTG...CAGTGATGACACGAAGGCTTCGGCGTTTGAGTGGGTGCAGGTGCACGCCAGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp GCACCCATGAAGTCCACCACGGGTCTCTGGGGCAATCCTTCTCTGAACGCAAAAGGCTCCCGCTCGGACTaGGTGGCCGCGTGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: APMKSTTGLWGNPSLNAKGSRSD*VAAWPV
Trigger: CACAGGCCACGCGGCCACGCAGTCCGAGCGGGAGCC...TTTTGCGTTCAGAGAAGGATTGCCCCAGAGACCCGTGGTGGACTTCATGGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp GCCCTGGCGTGCACCTGCACCCACTCAAACGCCGAAGCCTTCGTGTCATCACTGCGCGGGTACTGGTACTaGGTCTCCAGCTGCACCTCC +
Preference number: 4 (lower is better)
Translates to: ALACTCTHSNAEAFVSSLRGYWY*VSSCTS
Trigger: GGAGGTGCAGCTGGAGACGCAGTACCAGTACCCGCG...CAGTGATGACACGAAGGCTTCGGCGTTTGAGTGGGTGCAGGTGCACGCCAGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp GTTCCACAGTCTGGGGAGTGTGGTACTGCGTGGGCAGGGGCACAGATGGTCCAGTGCAGGCTGCGCTCATaGCCGTCCAGCTGGACCTTG +
Preference number: 4 (lower is better)
Translates to: VPQSGECGTAWAGAQMVQCRLRS*PSSWTL
Trigger: CAAGGTCCAGCTGGACGGGCATGAGCGCAGCCTGCA...CTGGACCATCTGTGCCCCTGCCCACGCAGTACCACACTCCCCAGACTGTGGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp GGCCCCACCAGGGCTCTGCAGCATCTGAGGCAAAAAGTCTTGGGCCGGACGAGGATGGGGGAGCTGCTCTaGTGTTCCTGTGGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: GPTRALQHLRQKVLGRTRMGELL*CSCGWV
Trigger: CACCCAGCCACAGGAACAGCAGAGCAGCTCCCCCAT...CCTCGTCCGGCCCAAGACTTTTTGCCTCAGATGCTGCAGAGCCCTGGTGGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp GCACGGCACAGTCACTGTGTGTGGTGGGACCCAGTGTCGGCTGAGAGGCCTGGACTCAGGTGGGAGGATTaGTTGAGGCCAGCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: ARHSHCVWWDPVSAERPGLRWED*LRPAWA
Trigger: TGCCCAGGCTGGCCTCAAGCAATCCTCCCACCTGAG...TCCAGGCCTCTCAGCCGACACTGGGTCCCACCACACACAGTGACTGTGCCGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp GCACGGCACAGTCACTGTGTGTGGTGGGACCCAGTGTCGGCTGAGAGGCCTGGAGCTCAGCCTGACTCATaGTTGACACCCCCACGCCCA +
Preference number: 4 (lower is better)
Translates to: ARHSHCVWWDPVSAERPGAQPDS*LTPPRP
Trigger: TGGGCGTGGGGGTGTCAAGCATGAGTCAGGCTGAGC...TCCAGGCCTCTCAGCCGACACTGGGTCCCACCACACACAGTGACTGTGCCGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp CCCAGGACTGATGGGCAGGTCCCGCTGGAGCCTCTTCACCGTGTCCCCGACCCAAAGCACTTCCATCCCTaGGACGTTCCTTCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: PRTDGQVPLEPLHRVPDPKHFHP*DVPSLG
Trigger: CCCAAGGGAAGGAACGTCCCAGGGATGGAAGTGCTT...TGGGTCGGGGACACGGTGAAGAGGCTCCAGCGGGACCTGCCCATCAGTCCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp CACCGTGTCCCCGACCCAGGAAACCCCGAGGCCAAGGAACCAGCCTGGCTTTGCTCATGCCCGTCCAGCTaGACCTTGAGCTTGTGGAGC +
Preference number: 4 (lower is better)
Translates to: HRVPDPGNPEAKEPAWLCSCPSS*TLSLWS
Trigger: GCTCCACAAGCTCAAGGTCCAGCTGGACGGGCATGA...GCAAAGCCAGGCTGGTTCCTTGGCCTCGGGGTTTCCTGGGTCGGGGACACGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp CTGGCCAGTGACCAGCGACAGGAGGCCAGAGGGCGCTCCAGGAGTTTTTCAGGCCGCTCAGCCACCCTCTaGGGCTGCCCCTTCTTTTGT +
Preference number: 4 (lower is better)
Translates to: LASDQRQEARGRSRSFSGRSATL*GCPFFC
Trigger: ACAAAAGAAGGGGCAGCCCCAGAGGGTGGCTGAGCG...GCCTGAAAAACTCCTGGAGCGCCCTCTGGCCTCCTGTCGCTGGTCACTGGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp CACCGTGTCCCCGACCCAGGAAACCCCGAGGCCAAGGAACCAGCCTGGCTTTGCAGCCTCCCCAGTAGCTaGGACTATAGGCACGAGCCA +
Preference number: 4 (lower is better)
Translates to: HRVPDPGNPEAKEPAWLCSLPSS*DYRHEP
Trigger: TGGCTCGTGCCTATAGTCCCAGCTACTGGGGAGGCT...GCAAAGCCAGGCTGGTTCCTTGGCCTCGGGGTTTCCTGGGTCGGGGACACGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR TCA 90 bp AAGGGAGTGGCTGAGTCAGCCTTAGAGGCCATTCTGTGGCCGAGAGCTGGAGGCGCCGCAGACGGGCTGTaGAAGGGGTTGAGACGTGGT +
Preference number: 4 (lower is better)
Translates to: KGVAESALEAILWPRAGGAADGL*KGLRRG
Trigger: ACCACGTCTCAACCCCTTTCACAGCCCGTCTGCGGC...GCCTCCAGCTCTCGGCCACAGAATGGCCTCTAAGGCTGACTCAGCCACTCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR TCA 90 bp GTTCCACAGTCTGGGGAGTGTGGTACTGCGTGGGCAGGGGCACAGATGGTCCAGCAAGCAAGGGGATGGTaGGGCATGGGACTGGGACAC +
Preference number: 4 (lower is better)
Translates to: VPQSGECGTAWAGAQMVQQARGW*GMGLGH
Trigger: GTGTCCCAGTCCCATGCCTCACCATCCCCTTGCTTG...CTGGACCATCTGTGCCCCTGCCCACGCAGTACCACACTCCCCAGACTGTGGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR TCA 90 bp GTTCCACAGTCTGGGGAGTGTGGTACTGCGTGGGCAGGGGCACAGATGGTCCAGCTGCGCATCCAGATGTaGGTCAGGTCGGAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: VPQSGECGTAWAGAQMVQLRIQM*VRSELQ
Trigger: CTGGAGCTCCGACCTGACTCACATCTGGATGCGCAG...CTGGACCATCTGTGCCCCTGCCCACGCAGTACCACACTCCCCAGACTGTGGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR TCA 90 bp ACAGTCACTGTGTGTGGTGGGACCCAGTGTCGGCTGAGAGGCCTGGAGGGGTCTGAGGCTATTCCTTTGTaGTGGGGCTGTGGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: TVTVCGGTQCRLRGLEGSEAIPL*WGCGGG
Trigger: GCCCCCACCACAGCCCCATCACAAAGGAATAGCCTC...AGACCCCTCCAGGCCTCTCAGCCGACACTGGGTCCCACCACACACAGTGACTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp GTCCTTCCATGCTGGCCCTTCCAGCACTCCTGCAGAGCACACTTTAGGAAACTCAGAGAAACGCGGAGCTaGCCTCGCCCCGCCCGGCTC +
Preference number: 4 (lower is better)
Translates to: VLPCWPFQHSCRAHFRKLRETRS*PRPARL
Trigger: GAGCCGGGCGGGGCGAGGGCAGCTCCGCGTTTCTCT...GAGTTTCCTAAAGTGTGCTCTGCAGGAGTGCTGGAAGGGCCAGCATGGAAGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp AGAGACCCCAGCCAGGCCACCCAGAATTCCACGGCACGGCCAACCCGGACCCCGGCTCACTGCTACCTCTaGCTTCTGGGTTCAAGTGAT +
Preference number: 4 (lower is better)
Translates to: RDPSQATQNSTARPTRTPAHCYL*LLGSSD
Trigger: ATCACTTGAACCCAGAAGGCAGAGGTAGCAGTGAGC...CGGGGTCCGGGTTGGCCGTGCCGTGGAATTCTGGGTGGCCTGGCTGGGGTCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp CTGCGCCCGGCCACTAGCACAGTTATAGTTCACTGCAGCCTCTACTTCCCAGGCCCCACCTGTTCCTGCTaGCCCACAGGGACTTGGGGC +
Preference number: 4 (lower is better)
Translates to: LRPATSTVIVHCSLYFPGPTCSC*PTGTWG
Trigger: GCCCCAAGTCCCTGTGGGGCAGCAGGAACAGGTGGG...GCCTGGGAAGTAGAGGCTGCAGTGAACTATAACTGTGCTAGTGGCCGGGCGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp AGAGACCCCAGCCAGGCCACCCAGAATTCCACGGCACGGCCAACCCGGACCCCGAAAAAGGCTGTCTGGTaGTTCCTTAGCAGTGCCACC +
Preference number: 4 (lower is better)
Translates to: RDPSQATQNSTARPTRTPKKAVW*FLSSAT
Trigger: GGTGGCACTGCTAAGGAAGCACCAGACAGCCTTTTT...CGGGGTCCGGGTTGGCCGTGCCGTGGAATTCTGGGTGGCCTGGCTGGGGTCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp GTGTCCCCGACCCAGGAAACCCCGAGGCCAAGGAACCAGCCTGGCTTTGCCCCCCCAAGATCACACCATTaGAGTCCAGCCTGGACGACA +
Preference number: 4 (lower is better)
Translates to: VSPTQETPRPRNQPGFAPPRSHH*SPAWTT
Trigger: TGTCGTCCAGGCTGGACTGCAATGGTGTGATCTTGG...GGGGGCAAAGCCAGGCTGGTTCCTTGGCCTCGGGGTTTCCTGGGTCGGGGACAC
62% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp AAGGGAGTGGCTGAGTCAGCCTTAGAGGCCATTCTGTGGCCGAGAGCTGGAGGCTGCCCCATGTGTTTCTaGAGGGCTGGGCCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: KGVAESALEAILWPRAGGCPMCF*RAGPQE
Trigger: CTCCTGGGGCCCAGCCCTGCAGAAACACATGGGGCA...GCCTCCAGCTCTCGGCCACAGAATGGCCTCTAAGGCTGACTCAGCCACTCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp GCACGGCACAGTCACTGTGTGTGGTGGGACCCAGTGTCGGCTGAGAGGCCTGGATTAGAGGCCATTCTGTaGCCGAGAGCTGGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: ARHSHCVWWDPVSAERPGLEAIL*PRAGGQ
Trigger: CTGGCCTCCAGCTCTCGGCCACAGAATGGCCTCTAA...TCCAGGCCTCTCAGCCGACACTGGGTCCCACCACACACAGTGACTGTGCCGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp CAGGAAACCCCGAGGCCAAGGAACCAGCCTGGCTTTGCCCCCAACGCTCTTAGCGAGTGTGGTACTGCGTaGGCAGGGGCACAGATGGTC +
Preference number: 4 (lower is better)
Translates to: QETPRPRNQPGFAPNALSECGTA*AGAQMV
Trigger: GACCATCTGTGCCCCTGCCCACGCAGTACCACACTC...GCTAAGAGCGTTGGGGGCAAAGCCAGGCTGGTTCCTTGGCCTCGGGGTTTCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp GTTCCACAGTCTGGGGAGTGTGGTACTGCGTGGGCAGGGGCACAGATGGTCCAGTGCTCCAAATTAGGATaGGCCCTGGCTGGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: VPQSGECGTAWAGAQMVQCSKLG*ALAGSR
Trigger: CCGGGAGCCAGCCAGGGCCCATCCTAATTTGGAGCA...CTGGACCATCTGTGCCCCTGCCCACGCAGTACCACACTCCCCAGACTGTGGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp GTGTCCCCGACCCAGGAAACCCCGAGGCCAAGGAACCAGCCTGGCTTTGCCCCCATGATCTGCTGGGTGTaGAGTGGGTCCTTCAATGCC +
Preference number: 4 (lower is better)
Translates to: VSPTQETPRPRNQPGFAPMICWV*SGSFNA
Trigger: GGCATTGAAGGACCCACTCCACACCCAGCAGATCAT...GGGGGCAAAGCCAGGCTGGTTCCTTGGCCTCGGGGTTTCCTGGGTCGGGGACAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp CACTCAGCACCCATGAAGTCCACCACGGGTCTCTGGGGCAATCCTTCTCTGAACCTGCCCCTGACAGGCTaGGCTGGCCCCTGCAGGATG +
Preference number: 4 (lower is better)
Translates to: HSAPMKSTTGLWGNPSLNLPLTG*AGPCRM
Trigger: CATCCTGCAGGGGCCAGCCCAGCCTGTCAGGGGCAG...GTTCAGAGAAGGATTGCCCCAGAGACCCGTGGTGGACTTCATGGGTGCTGAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp ACAGTCACTGTGTGTGGTGGGACCCAGTGTCGGCTGAGAGGCCTGGAGGGGTCTCTAGGTGGGAGGACGTaGCTCCCAGGCCACCTTAAC +
Preference number: 4 (lower is better)
Translates to: TVTVCGGTQCRLRGLEGSLGGRT*LPGHLN
Trigger: GTTAAGGTGGCCTGGGAGCCACGTCCTCCCACCTAG...AGACCCCTCCAGGCCTCTCAGCCGACACTGGGTCCCACCACACACAGTGACTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp CCCGAGAGCGTGGCTTCGGGTCTACCAGATGCCTTCAAGGAAAAGGCCAGAACCTGCTGTTCCTGTGGCTaGGTGCGGGGCAGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: PESVASGLPDAFKEKARTCCSCG*VRGRLW
Trigger: CCACAGCCTGCCCCGCACCCAGCCACAGGAACAGCA...GGTTCTGGCCTTTTCCTTGAAGGCATCTGGTAGACCCGAAGCCACGCTCTCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp AGGGCAGCTGTTTTAAAAACCCGCACACAGGACAGTGGCTGTCTCTGCCGCACGCCAGTTCCAGGTAGCTaGGGCGGACCCAGTCCCGGT +
Preference number: 4 (lower is better)
Translates to: RAAVLKTRTQDSGCLCRTPVPGS*GGPSPG
Trigger: ACCGGGACTGGGTCCGCCGCAGCTACCTGGAACTGG...CGTGCGGCAGAGACAGCCACTGTCCTGTGTGCGGGTTTTTAAAACAGCTGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp GATTGGCAGAACCAAGGCACTGCCCTAGACGCTTTCCATGGAGTGGTGCCAGTTAGAGCCCCCGCCTCCTaGTGCCACAGCCCAAGGGAG +
Preference number: 4 (lower is better)
Translates to: DWQNQGTALDAFHGVVPVRAPAS*CHSPRE
Trigger: CTCCCTTGGGCTGTGGCAGCAGGAGGCGGGGGCTCT...AACTGGCACCACTCCATGGAAAGCGTCTAGGGCAGTGCCTTGGTTCTGCCAATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp GTGTCCCCGACCCAGGAAACCCCGAGGCCAAGGAACCAGCCTGGCTTTGCCCCCTTCGGGTCTACCAGATaGCTTCAAGGAAAAGGCCAG +
Preference number: 4 (lower is better)
Translates to: VSPTQETPRPRNQPGFAPFGSTR*LQGKGQ
Trigger: CTGGCCTTTTCCTTGAAGGCATCTGGTAGACCCGAA...GGGGGCAAAGCCAGGCTGGTTCCTTGGCCTCGGGGTTTCCTGGGTCGGGGACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp CTGCTGCCACAGCCCAAGGGAGTGGCTGAGTCAGCCTTAGAGGCCATTCTGTGGTGGGGAGTGTGGTACTaGGTGGGCAGGGGCACAGAT +
Preference number: 4 (lower is better)
Translates to: LLPQPKGVAESALEAILWWGVWY*VGRGTD
Trigger: ATCTGTGCCCCTGCCCACGCAGTACCACACTCCCCA...CCACAGAATGGCCTCTAAGGCTGACTCAGCCACTCCCTTGGGCTGTGGCAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp CAGGAAACCCCGAGGCCAAGGAACCAGCCTGGCTTTGCCCCCAACGCTCTTAGCGCCACCCTCTGGGGCTaGCCCTTCTTTTGTTTCTGG +
Preference number: 4 (lower is better)
Translates to: QETPRPRNQPGFAPNALSATLWG*PFFCFW
Trigger: CCAGAAACAAAAGAAGGGGCAGCCCCAGAGGGTGGC...GCTAAGAGCGTTGGGGGCAAAGCCAGGCTGGTTCCTTGGCCTCGGGGTTTCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp CTGGCCAGTGACCAGCGACAGGAGGCCAGAGGGCGCTCCAGGAGTTTTTCAGGCACACCGTTGCCTGTTTaGTCAGAGTGGCAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: LASDQRQEARGRSRSFSGTPLPV*SEWQVV
Trigger: CACCACCTGCCACTCTGAGCAAACAGGCAACGGTGT...GCCTGAAAAACTCCTGGAGCGCCCTCTGGCCTCCTGTCGCTGGTCACTGGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp CTGGTGCTGCGGCGTGCATGTGCGGCCCGAGAGCGTGGCTTCGGGTCTACCAGATTCAGGAAACACCGTTaGCTGTTTGCTCAGAGTGGC +
Preference number: 4 (lower is better)
Translates to: LVLRRACAARERGFGSTRFRKHR*LFAQSG
Trigger: GCCACTCTGAGCAAACAGGCAACGGTGTTTCCTGAA...TCTGGTAGACCCGAAGCCACGCTCTCGGGCCGCACATGCACGCCGCAGCACCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp AAGACCCACGGCGACACCTTACCCAACCAGGATGGGGCTGGAGAAGGCCACGCCGTAATCCGAGTACTTTaGGGGGCTCAGGTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: KTHGDTLPNQDGAGEGHAVIRVL*GAQVGG
Trigger: TCCTCCCACCTGAGCCCCGCAAAGTACTCGGATTAC...GGCGTGGCCTTCTCCAGCCCCATCCTGGTTGGGTAAGGTGTCGCCGTGGGTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp CTGGCCAGTGACCAGCGACAGGAGGCCAGAGGGCGCTCCAGGAGTTTTTCAGGCAGGGCCTGTACCGAGTaGTGGTTAGAGGTGACCAGT +
Preference number: 4 (lower is better)
Translates to: LASDQRQEARGRSRSFSGRACTE*WLEVTS
Trigger: ACTGGTCACCTCTAACCACCACTCGGTACAGGCCCT...GCCTGAAAAACTCCTGGAGCGCCCTCTGGCCTCCTGTCGCTGGTCACTGGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp AAGACCCACGGCGACACCTTACCCAACCAGGATGGGGCTGGAGAAGGCCACGCCACCAGGTACAGTAACTaGCCCCCAGATGGCACTGGA +
Preference number: 4 (lower is better)
Translates to: KTHGDTLPNQDGAGEGHATRYSN*PPDGTG
Trigger: TCCAGTGCCATCTGGGGGCCAGTTACTGTACCTGGT...GGCGTGGCCTTCTCCAGCCCCATCCTGGTTGGGTAAGGTGTCGCCGTGGGTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp CGTCCCCACCCATGTGCCACCATCACTGGGCACTTAATACCTGCCTGGATGCTGGGGGTCCTTCCATGCTaGCCCTTCCAGCACTCCTGC +
Preference number: 4 (lower is better)
Translates to: RPHPCATITGHLIPAWMLGVLPC*PFQHSC
Trigger: GCAGGAGTGCTGGAAGGGCCAGCATGGAAGGACCCC...CAGCATCCAGGCAGGTATTAAGTGCCCAGTGATGGTGGCACATGGGTGGGGACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp CACTCAGCACCCATGAAGTCCACCACGGGTCTCTGGGGCAATCCTTCTCTGAACCCTGACAGGCTGGGCTaGCCCCTGCAGGATGCTCCA +
Preference number: 4 (lower is better)
Translates to: HSAPMKSTTGLWGNPSLNPDRLG*PLQDAP
Trigger: TGGAGCATCCTGCAGGGGCCAGCCCAGCCTGTCAGG...GTTCAGAGAAGGATTGCCCCAGAGACCCGTGGTGGACTTCATGGGTGCTGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356387.6
3UTR CAA 72 bp ACTGCCCAGCCCAAGGGGCAGCCTGGCTTCTCAGGATaGGCAGAACCAAGGCACTGCCCTAGACGCTTTCCA +
Preference number: 4 (lower is better)
Translates to: TAQPKGQPGFSG*AEPRHCPRRFP
Trigger: TGGAAAGCGTCTAGGGCAGTGCCTTGGTTCTGCCAATCCTGAGAAGCCAGGCTGCCCCTTGGGCTGGGCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
CDS-3UTR TCA 90 bp CTAAAGAGCTGGGAACAGCTTCAGAGTCAGGCTCAGCCTGACTCATGCTTGACACACGCATGCCGGGTCTaGGACTCCCCCGGACCGCTG +
Preference number: 4 (lower is better)
Translates to: LKSWEQLQSQAQPDSCLTHACRV*DSPGPL
Trigger: CAGCGGTCCGGGGGAGTCTCAGACCCGGCATGCGTG...TGTCAAGCATGAGTCAGGCTGAGCCTGACTCTGAAGCTGTTCCCAGCTCTTTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR TCA 90 bp GCACCCATGAAGTCCACCACGGGTCTCTGGGGCAATCCTTCTCTGAACGCAAAAGGACCCAGTGTCGGCTaGGAGGCCTGGAGGGGTCTT +
Preference number: 4 (lower is better)
Translates to: APMKSTTGLWGNPSLNAKGPSVG*EAWRGL
Trigger: AAGACCCCTCCAGGCCTCTCAGCCGACACTGGGTCC...TTTTGCGTTCAGAGAAGGATTGCCCCAGAGACCCGTGGTGGACTTCATGGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR TCA 90 bp CTGGTGCTGCGGCGTGCATGTGCGGCCCGAGAGCGTGGCTTCGGGTCTACCAGATCGCCTGGCCGATGTTaGTATTCTTTAGCAAAGCGA +
Preference number: 4 (lower is better)
Translates to: LVLRRACAARERGFGSTRSPGRC*YSLAKR
Trigger: TCGCTTTGCTAAAGAATATCAACATCGGCCAGGCGA...TCTGGTAGACCCGAAGCCACGCTCTCGGGCCGCACATGCACGCCGCAGCACCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR TCA 90 bp AGGGCAGCTGTTTTAAAAACCCGCACACAGGACAGTGGCTGTCTCTGCCGCACGGGTCGGAGCTCCAGCTaGTCCTCACTGCACTGGAGC +
Preference number: 4 (lower is better)
Translates to: RAAVLKTRTQDSGCLCRTGRSSS*SSLHWS
Trigger: GCTCCAGTGCAGTGAGGATCAGCTGGAGCTCCGACC...CGTGCGGCAGAGACAGCCACTGTCCTGTGTGCGGGTTTTTAAAACAGCTGCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR TCA 90 bp CTTAACTTCGGCTCCCTGGTCAACTCACTTGGAGCAAGAGCACAGAGCCCGGCTGAGGGCAGGGAAATCTaGGAGCCTCCTTCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: LNFGSLVNSLGARAQSPAEGREI*EPPSSP
Trigger: GGGGCTGGAAGGAGGCTCTCAGATTTCCCTGCCCTC...AGCCGGGCTCTGTGCTCTTGCTCCAAGTGAGTTGACCAGGGAGCCGAAGTTAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp ATGAAGTCCACCACGGGTCTCTGGGGCAATCCTTCTCTGAACGCAAAACCCTGCGGAGGGCGGAGGTCCTaGTGGAGGCCTTCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: MKSTTGLWGNPSLNAKPCGGRRS*WRPSAW
Trigger: CCAAGCTGAAGGCCTCCAGCAGGACCTCCGCCCTCC...GCAGGGTTTTGCGTTCAGAGAAGGATTGCCCCAGAGACCCGTGGTGGACTTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp CGTCCCCACCCATGTGCCACCATCACTGGGCACTTAATACCTGCCTGGATGCTGCACCAAGCCCTGGCGTaGACCTGCACCCACTCAAAC +
Preference number: 4 (lower is better)
Translates to: RPHPCATITGHLIPAWMLHQALA*TCTHSN
Trigger: GTTTGAGTGGGTGCAGGTGCACGCCAGGGCTTGGTG...CAGCATCCAGGCAGGTATTAAGTGCCCAGTGATGGTGGCACATGGGTGGGGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp GACAAGGCATGGCTGACTCTCCAGGTTACAGCTGGAGAAGAGGGGAAAGGTGTTGCTCAGGGCAGCTGGTaGTGCGGCGTGCATGTGCGG +
Preference number: 4 (lower is better)
Translates to: DKAWLTLQVTAGEEGKGVAQGSW*CGVHVR
Trigger: CCGCACATGCACGCCGCAGCACCAGCTGCCCTGAGC...AACACCTTTCCCCTCTTCTCCAGCTGTAACCTGGAGAGTCAGCCATGCCTTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp CGTCCCCACCCATGTGCCACCATCACTGGGCACTTAATACCTGCCTGGATGCTGTACCTGCCTGGATGCTaGCAGGCCAAGAGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: RPHPCATITGHLIPAWMLYLPGC*QAKSSA
Trigger: GGCAGAGCTCTTGGCCTGGCAGCATCCAGGCAGGTA...CAGCATCCAGGCAGGTATTAAGTGCCCAGTGATGGTGGCACATGGGTGGGGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp CACCGTGTCCCCGACCCAGGAAACCCCGAGGCCAAGGAACCAGCCTGGCTTTGCCCTTCAAGGCGTTTCTaGAGCTCCAACAACAGCTCA +
Preference number: 4 (lower is better)
Translates to: HRVPDPGNPEAKEPAWLCPSRRF*SSNNSS
Trigger: TGAGCTGTTGTTGGAGCTGCAGAAACGCCTTGAAGG...GCAAAGCCAGGCTGGTTCCTTGGCCTCGGGGTTTCCTGGGTCGGGGACACGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp CGTCCCCACCCATGTGCCACCATCACTGGGCACTTAATACCTGCCTGGATGCTGTTCACGCCATTCTCCTaGCTCTGCCTCCCGAGCAGC +
Preference number: 4 (lower is better)
Translates to: RPHPCATITGHLIPAWMLFTPFS*LCLPSS
Trigger: GCTGCTCGGGAGGCAGAGGCAGGAGAATGGCGTGAA...CAGCATCCAGGCAGGTATTAAGTGCCCAGTGATGGTGGCACATGGGTGGGGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp CACTCAGCACCCATGAAGTCCACCACGGGTCTCTGGGGCAATCCTTCTCTGAACGGACCCACCTGTTCCTaGTGCCCCACAGGGACTTGG +
Preference number: 4 (lower is better)
Translates to: HSAPMKSTTGLWGNPSLNGPTCS*CPTGTW
Trigger: CCAAGTCCCTGTGGGGCAGCAGGAACAGGTGGGTCC...GTTCAGAGAAGGATTGCCCCAGAGACCCGTGGTGGACTTCATGGGTGCTGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp ATGAAGTCCACCACGGGTCTCTGGGGCAATCCTTCTCTGAACGCAAAACCCTGCCGAGGCTTGTGGGCTTaGTGGCCTGGGGCTCGGTAC +
Preference number: 4 (lower is better)
Translates to: MKSTTGLWGNPSLNAKPCRGLWA*WPGARY
Trigger: GTACCGAGCCCCAGGCCAGCAAGCCCACAAGCCTCG...GCAGGGTTTTGCGTTCAGAGAAGGATTGCCCCAGAGACCCGTGGTGGACTTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp GTTCCACAGTCTGGGGAGTGTGGTACTGCGTGGGCAGGGGCACAGATGGTCCAGAGCCTCCACCGGAAGTaGAGTCTTTCTCGAGGCTTG +
Preference number: 4 (lower is better)
Translates to: VPQSGECGTAWAGAQMVQSLHRK*SLSRGL
Trigger: CAAGCCTCGAGAAAGACTGCACTTCCGGTGGAGGCT...CTGGACCATCTGTGCCCCTGCCCACGCAGTACCACACTCCCCAGACTGTGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp CACTCAGCACCCATGAAGTCCACCACGGGTCTCTGGGGCAATCCTTCTCTGAACGGCTGGGCTGGCCCCTaGAGGATGCTCCAACATCTG +
Preference number: 4 (lower is better)
Translates to: HSAPMKSTTGLWGNPSLNGWAGP*RMLQHL
Trigger: CAGATGTTGGAGCATCCTGCAGGGGCCAGCCCAGCC...GTTCAGAGAAGGATTGCCCCAGAGACCCGTGGTGGACTTCATGGGTGCTGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp GCACGGCACAGTCACTGTGTGTGGTGGGACCCAGTGTCGGCTGAGAGGCCTGGACCAGCTGATCCTCACTaGACTGGAGCAGATAAGCCA +
Preference number: 4 (lower is better)
Translates to: ARHSHCVWWDPVSAERPGPADPH*TGADKP
Trigger: TGGCTTATCTGCTCCAGTGCAGTGAGGATCAGCTGG...TCCAGGCCTCTCAGCCGACACTGGGTCCCACCACACACAGTGACTGTGCCGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp CTGCTGCCACAGCCCAAGGGAGTGGCTGAGTCAGCCTTAGAGGCCATTCTGTGGCACAGTCACTGTGTGTaGTGGGACCCAGTGTCGGCT +
Preference number: 4 (lower is better)
Translates to: LLPQPKGVAESALEAILWHSHCV*WDPVSA
Trigger: AGCCGACACTGGGTCCCACCACACACAGTGACTGTG...CCACAGAATGGCCTCTAAGGCTGACTCAGCCACTCCCTTGGGCTGTGGCAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp CACTCAGCACCCATGAAGTCCACCACGGGTCTCTGGGGCAATCCTTCTCTGAACTGCGGCCCGAGAGCGTaGCTTCGGGTCTACCAGATG +
Preference number: 4 (lower is better)
Translates to: HSAPMKSTTGLWGNPSLNCGPRA*LRVYQM
Trigger: CATCTGGTAGACCCGAAGCCACGCTCTCGGGCCGCA...GTTCAGAGAAGGATTGCCCCAGAGACCCGTGGTGGACTTCATGGGTGCTGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp CTTAACTTCGGCTCCCTGGTCAACTCACTTGGAGCAAGAGCACAGAGCCCGGCTTCTCGTGGGGACCCTTaGTGTGACTCCCCTAGGGCC +
Preference number: 4 (lower is better)
Translates to: LNFGSLVNSLGARAQSPASRGDP*CDSPRA
Trigger: GGCCCTAGGGGAGTCACACCAAGGGTCCCCACGAGA...AGCCGGGCTCTGTGCTCTTGCTCCAAGTGAGTTGACCAGGGAGCCGAAGTTAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp ACAGTCACTGTGTGTGGTGGGACCCAGTGTCGGCTGAGAGGCCTGGAGGGGTCTCCCAAAGCCACTCCTTaGAGGAACGCTGACATGCTG +
Preference number: 4 (lower is better)
Translates to: TVTVCGGTQCRLRGLEGSPKATP*RNADML
Trigger: CAGCATGTCAGCGTTCCTCCAAGGAGTGGCTTTGGG...AGACCCCTCCAGGCCTCTCAGCCGACACTGGGTCCCACCACACACAGTGACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp GCTACAGGTTGGCAGGTTCTACATGGGTTTCGGCTCCTGTGTGGGCCTTGCCCTCTCTCCCGGCCACCATaGCCCTACCAATGGTCACTG +
Preference number: 4 (lower is better)
Translates to: ATGWQVLHGFRLLCGPCPLSRPP*PYQWSL
Trigger: CAGTGACCATTGGTAGGGCCATGGTGGCCGGGAGAG...AGGGCAAGGCCCACACAGGAGCCGAAACCCATGTAGAACCTGCCAACCTGTAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp CTGCGCCCGGCCACTAGCACAGTTATAGTTCACTGCAGCCTCTACTTCCCAGGCTCTCCCCACAGGCTCTaGGGTGACCCTGAGGTTTCC +
Preference number: 4 (lower is better)
Translates to: LRPATSTVIVHCSLYFPGSPHRL*GDPEVS
Trigger: GGAAACCTCAGGGTCACCCCAGAGCCTGTGGGGAGA...GCCTGGGAAGTAGAGGCTGCAGTGAACTATAACTGTGCTAGTGGCCGGGCGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp GTGTCCCCGACCCAGGAAACCCCGAGGCCAAGGAACCAGCCTGGCTTTGCCCCCAAAATTAGCAGGGCATaGTGGTGGTGCATGCCTGTA +
Preference number: 4 (lower is better)
Translates to: VSPTQETPRPRNQPGFAPKISRA*WWCMPV
Trigger: TACAGGCATGCACCACCACCATGCCCTGCTAATTTT...GGGGGCAAAGCCAGGCTGGTTCCTTGGCCTCGGGGTTTCCTGGGTCGGGGACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp GGCCCCACCAGGGCTCTGCAGCATCTGAGGCAAAAAGTCTTGGGCCGGACGAGGCCTAGACGCTTTCCATaGAGTGGTGCCAGTTGCTTG +
Preference number: 4 (lower is better)
Translates to: GPTRALQHLRQKVLGRTRPRRFP*SGASCL
Trigger: CAAGCAACTGGCACCACTCCATGGAAAGCGTCTAGG...CCTCGTCCGGCCCAAGACTTTTTGCCTCAGATGCTGCAGAGCCCTGGTGGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp ATCCAGGGCAGCTGTTTTAAAAACCCGCACACAGGACAGTGGCTGTCTCTGCCGCACAGTACCCATGGGTaGGTGGGCCGCAGACGGGCT +
Preference number: 4 (lower is better)
Translates to: IQGSCFKNPHTGQWLSLPHSTHG*VGRRRA
Trigger: AGCCCGTCTGCGGCCCACCCACCCATGGGTACTGTG...CGGCAGAGACAGCCACTGTCCTGTGTGCGGGTTTTTAAAACAGCTGCCCTGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp ATGAAGTCCACCACGGGTCTCTGGGGCAATCCTTCTCTGAACGCAAAACCCTGCTGGCCTGGACCCATGTaGCCAGCCCTCTCTCCCACC +
Preference number: 4 (lower is better)
Translates to: MKSTTGLWGNPSLNAKPCWPGPM*PALSPT
Trigger: GGTGGGAGAGAGGGCTGGCCACATGGGTCCAGGCCA...GCAGGGTTTTGCGTTCAGAGAAGGATTGCCCCAGAGACCCGTGGTGGACTTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp GTCCTTCCATGCTGGCCCTTCCAGCACTCCTGCAGAGCACACTTTAGGAAACTCGTGGGGGCGCTTACCTaGATGGGGGAGCTGCTCTGC +
Preference number: 4 (lower is better)
Translates to: VLPCWPFQHSCRAHFRKLVGALT*MGELLC
Trigger: GCAGAGCAGCTCCCCCATCCAGGTAAGCGCCCCCAC...GAGTTTCCTAAAGTGTGCTCTGCAGGAGTGCTGGAAGGGCCAGCATGGAAGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp AAGGAAAAGGCCAGAACCTGCACTGCACGGCACAGTCACTGTGTGTGGTGGGACGTGATGGGGCTGTGGTaGGGGCGCTTACCTGGATGG +
Preference number: 4 (lower is better)
Translates to: KEKARTCTARHSHCVWWDVMGLW*GRLPGW
Trigger: CCATCCAGGTAAGCGCCCCCACCACAGCCCCATCAC...GTCCCACCACACACAGTGACTGTGCCGTGCAGTGCAGGTTCTGGCCTTTTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356387.6
3UTR CAA 72 bp GTAGTCACTTGGTGTCATAACAAGGAGGGCACTCATTaGGCCTGGGCCGGCCCCTGGCCCCACTATCCACAG +
Preference number: 4 (lower is better)
Translates to: VVTWCHNKEGTH*AWAGPWPHYPQ
Trigger: CTGTGGATAGTGGGGCCAGGGGCCGGCCCAGGCCAAATGAGTGCCCTCCTTGTTATGACACCAAGTGACTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000403646.7
ENST00000473939.1
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
CDS-3UTR TCA 90 bp GCTACAGGTTGGCAGGTTCTACATGGGTTTCGGCTCCTGTGTGGGCCTTGCCCTGGGGCAATCCTTCTCTaGACGCAAAACCCTGCCCTG +
Preference number: 4 (lower is better)
Translates to: ATGWQVLHGFRLLCGPCPGAILL*TQNPAL
Trigger: CAGGGCAGGGTTTTGCGTTCAGAGAAGGATTGCCCC...AGGGCAAGGCCCACACAGGAGCCGAAACCCATGTAGAACCTGCCAACCTGTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR TCA 90 bp TCAGGCTTACGTGGTCTGGTCCTCAGCAGACCCTTCCTAGAAGACACGAAAACAGGGGGAACGCCAAGCTaGCCCTGTCCAGGTGGGCTC +
Preference number: 4 (lower is better)
Translates to: SGLRGLVLSRPFLEDTKTGGTPS*PCPGGL
Trigger: GAGCCCACCTGGACAGGGTCAGCTTGGCGTTCCCCC...TGTTTTCGTGTCTTCTAGGAAGGGTCTGCTGAGGACCAGACCACGTAAGCCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR TCA 90 bp AAAGACAAGGCATGGCTGACTCTCCAGGTTACAGCTGGAGAAGAGGGGAAAGGTCCTGGGGCTCGGTACTaGGGCCACTGCCCAGCCCAA +
Preference number: 4 (lower is better)
Translates to: KDKAWLTLQVTAGEEGKGPGARY*GHCPAQ
Trigger: TTGGGCTGGGCAGTGGCCTCAGTACCGAGCCCCAGG...ACCTTTCCCCTCTTCTCCAGCTGTAACCTGGAGAGTCAGCCATGCCTTGTCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR TCA 90 bp GTTCCACAGTCTGGGGAGTGTGGTACTGCGTGGGCAGGGGCACAGATGGTCCAGAAAAGTCTGCGTCGATaGTCTGCTGGGTGTGGAGTG +
Preference number: 4 (lower is better)
Translates to: VPQSGECGTAWAGAQMVQKSLRR*SAGCGV
Trigger: CACTCCACACCCAGCAGATCATCGACGCAGACTTTT...CTGGACCATCTGTGCCCCTGCCCACGCAGTACCACACTCCCCAGACTGTGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR TCA 90 bp GTTCCACAGTCTGGGGAGTGTGGTACTGCGTGGGCAGGGGCACAGATGGTCCAGAGTTGGGTCTGTCCTTaGAGCTGTGACACGAAGACC +
Preference number: 4 (lower is better)
Translates to: VPQSGECGTAWAGAQMVQSWVCP*SCDTKT
Trigger: GGTCTTCGTGTCACAGCTTCAAGGACAGACCCAACT...CTGGACCATCTGTGCCCCTGCCCACGCAGTACCACACTCCCCAGACTGTGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR TCA 90 bp GCACCCATGAAGTCCACCACGGGTCTCTGGGGCAATCCTTCTCTGAACGCAAAAAGCCTGACTCATGCTTaGCACCCCCACGCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: APMKSTTGLWGNPSLNAKSLTHA*HPHAQG
Trigger: TCCCTGGGCGTGGGGGTGTCAAGCATGAGTCAGGCT...TTTTGCGTTCAGAGAAGGATTGCCCCAGAGACCCGTGGTGGACTTCATGGGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp GTCCTTCCATGCTGGCCCTTCCAGCACTCCTGCAGAGCACACTTTAGGAAACTCCGATGTAGGGGTGCATaGGCTCATGCGGGGACTCGC +
Preference number: 4 (lower is better)
Translates to: VLPCWPFQHSCRAHFRKLRCRGA*AHAGTR
Trigger: GCGAGTCCCCGCATGAGCGCATGCACCCCTACATCG...GAGTTTCCTAAAGTGTGCTCTGCAGGAGTGCTGGAAGGGCCAGCATGGAAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp ATGAAGTCCACCACGGGTCTCTGGGGCAATCCTTCTCTGAACGCAAAACCCTGCCCGGCCTGGCCAGGCTaGCCACCATTGGAAACATCC +
Preference number: 4 (lower is better)
Translates to: MKSTTGLWGNPSLNAKPCPAWPG*PPLETS
Trigger: GGATGTTTCCAATGGTGGGCAGCCTGGCCAGGCCGG...GCAGGGTTTTGCGTTCAGAGAAGGATTGCCCCAGAGACCCGTGGTGGACTTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp GCACGGCACAGTCACTGTGTGTGGTGGGACCCAGTGTCGGCTGAGAGGCCTGGAGTCTCTGTTCTCTGCTaGAGCCACATTTCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: ARHSHCVWWDPVSAERPGVSVLC*SHISRD
Trigger: GTCTCTGGAAATGTGGCTGCAGCAGAGAACAGAGAC...TCCAGGCCTCTCAGCCGACACTGGGTCCCACCACACACAGTGACTGTGCCGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp CAGGAAACCCCGAGGCCAAGGAACCAGCCTGGCTTTGCCCCCAACGCTCTTAGCGCACCAGGAAGACTGTaGTCCAAATTAGGATGGGCC +
Preference number: 4 (lower is better)
Translates to: QETPRPRNQPGFAPNALSAPGRL*SKLGWA
Trigger: GGCCCATCCTAATTTGGAGCACAGTCTTCCTGGTGC...GCTAAGAGCGTTGGGGGCAAAGCCAGGCTGGTTCCTTGGCCTCGGGGTTTCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp CAGCCTTGCAAAATGTCTGCATCTGACAAATCCCCGCCTCTGCGGACTCCCGGGCTGGCCCCTGCAGGATaGTCCAACATCTGGAGAACG +
Preference number: 4 (lower is better)
Translates to: QPCKMSASDKSPPLRTPGLAPAG*SNIWRT
Trigger: CGTTCTCCAGATGTTGGAGCATCCTGCAGGGGCCAG...CCCGGGAGTCCGCAGAGGCGGGGATTTGTCAGATGCAGACATTTTGCAAGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp CACTCAGCACCCATGAAGTCCACCACGGGTCTCTGGGGCAATCCTTCTCTGAACCCTGGATGGGGGAGCTaGTCTGCTGTTCCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: HSAPMKSTTGLWGNPSLNPGWGS*SAVPVA
Trigger: AGCCACAGGAACAGCAGAGCAGCTCCCCCATCCAGG...GTTCAGAGAAGGATTGCCCCAGAGACCCGTGGTGGACTTCATGGGTGCTGAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp ATGAAGTCCACCACGGGTCTCTGGGGCAATCCTTCTCTGAACGCAAAACCCTGCGCTGCACCTCCACCATaGCCACCATGGCAAAGCCGG +
Preference number: 4 (lower is better)
Translates to: MKSTTGLWGNPSLNAKPCAAPPP*PPWQSR
Trigger: CCGGCTTTGCCATGGTGGCCATGGTGGAGGTGCAGC...GCAGGGTTTTGCGTTCAGAGAAGGATTGCCCCAGAGACCCGTGGTGGACTTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp CACTCAGCACCCATGAAGTCCACCACGGGTCTCTGGGGCAATCCTTCTCTGAACCAGGCTGCCCACCATTaGAAACATCCCCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: HSAPMKSTTGLWGNPSLNQAAHH*KHPPGP
Trigger: AGGCCCTGGGGGATGTTTCCAATGGTGGGCAGCCTG...GTTCAGAGAAGGATTGCCCCAGAGACCCGTGGTGGACTTCATGGGTGCTGAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp CTCAGCACCCATGAAGTCCACCACGGGTCTCTGGGGCAATCCTTCTCTGAACGCTGCCTCTCCCAGCCGTaGGGAGCCGTTTGTTTAGGA +
Preference number: 4 (lower is better)
Translates to: LSTHEVHHGSLGQSFSERCLSQP*GAVCLG
Trigger: TCCTAAACAAACGGCTCCCCACGGCTGGGAGAGGCA...GCGTTCAGAGAAGGATTGCCCCAGAGACCCGTGGTGGACTTCATGGGTGCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp CTGGCCAGTGACCAGCGACAGGAGGCCAGAGGGCGCTCCAGGAGTTTTTCAGGCATGTGCCACCATCACTaGGCACTTAATACCTGCCTG +
Preference number: 4 (lower is better)
Translates to: LASDQRQEARGRSRSFSGMCHHH*ALNTCL
Trigger: CAGGCAGGTATTAAGTGCCCAGTGATGGTGGCACAT...GCCTGAAAAACTCCTGGAGCGCCCTCTGGCCTCCTGTCGCTGGTCACTGGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp AGGTTTCCTCTCCCGGCCACCATGGCCCTACCAATGGTCACTGCTATTCCCACAAGAGGGTGTACCACGTaGGAGGGGCCTTGGCATGTC +
Preference number: 4 (lower is better)
Translates to: RFPLPATMALPMVTAIPTRGCTT*EGPWHV
Trigger: GACATGCCAAGGCCCCTCCCACGTGGTACACCCTCT...TGTGGGAATAGCAGTGACCATTGGTAGGGCCATGGTGGCCGGGAGAGGAAACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp GGGCAGCCTGGCTTCTCAGGATTGGCAGAACCAAGGCACTGCCCTAGACGCTTTGCGTCGATGATCTGCTaGGTGTGGAGTGGGTCCTTC +
Preference number: 4 (lower is better)
Translates to: GQPGFSGLAEPRHCPRRFASMIC*VWSGSF
Trigger: GAAGGACCCACTCCACACCCAGCAGATCATCGACGC...AAAGCGTCTAGGGCAGTGCCTTGGTTCTGCCAATCCTGAGAAGCCAGGCTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp ACAGTCACTGTGTGTGGTGGGACCCAGTGTCGGCTGAGAGGCCTGGAGGGGTCTTTGGCAGGTTCTACATaGGTTTCGGCTCCTGTGTGG +
Preference number: 4 (lower is better)
Translates to: TVTVCGGTQCRLRGLEGSLAGST*VSAPVW
Trigger: CCACACAGGAGCCGAAACCCATGTAGAACCTGCCAA...AGACCCCTCCAGGCCTCTCAGCCGACACTGGGTCCCACCACACACAGTGACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp CAGCCTTGCAAAATGTCTGCATCTGACAAATCCCCGCCTCTGCGGACTCCCGGGAGCCTCCCCAGTAGCTaGAACTACAGGCGTGTGCCA +
Preference number: 4 (lower is better)
Translates to: QPCKMSASDKSPPLRTPGSLPSS*NYRRVP
Trigger: TGGCACACGCCTGTAGTTCCAGCTACTGGGGAGGCT...CCCGGGAGTCCGCAGAGGCGGGGATTTGTCAGATGCAGACATTTTGCAAGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp GAGTCACTGCGCCCGGCCCCAGTGACTATTTATGAGAACAAAAGACAAGGCATGGCTTCTGCCACAGCCTaGCCCCCGTACACGGCCCCA +
Preference number: 4 (lower is better)
Translates to: ESLRPAPVTIYENKRQGMASATA*PPYTAP
Trigger: TGGGGCCGTGTACGGGGGCCAGGCTGTGGCAGAAGC...CATGCCTTGTCTTTTGTTCTCATAAATAGTCACTGGGGCCGGGCGCAGTGACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp AGGGCAGCTGTTTTAAAAACCCGCACACAGGACAGTGGCTGTCTCTGCCGCACGCAACCAGGATGGGGCTaGAGAAGGCCACGCCAGGAT +
Preference number: 4 (lower is better)
Translates to: RAAVLKTRTQDSGCLCRTQPGWG*RRPRQD
Trigger: ATCCTGGCGTGGCCTTCTCCAGCCCCATCCTGGTTG...CGTGCGGCAGAGACAGCCACTGTCCTGTGTGCGGGTTTTTAAAACAGCTGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp CTAAAGAGCTGGGAACAGCTTCAGAGTCAGGCTCAGCCTGACTCATGCTTGACAGCTGAGGGGGTGGCCTaGACCCATGTGGCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: LKSWEQLQSQAQPDSCLTAEGVA*THVASP
Trigger: AGGGCTGGCCACATGGGTCCAGGCCACCCCCTCAGC...TGTCAAGCATGAGTCAGGCTGAGCCTGACTCTGAAGCTGTTCCCAGCTCTTTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR TCA 90 bp ATGAAGTCCACCACGGGTCTCTGGGGCAATCCTTCTCTGAACGCAAAACCCTGCGCCCAAGGGAGTGGCTaGGTCAGCCTTAGAGGCCAT +
Preference number: 4 (lower is better)
Translates to: MKSTTGLWGNPSLNAKPCAQGSG*VSLRGH
Trigger: ATGGCCTCTAAGGCTGACTCAGCCACTCCCTTGGGC...GCAGGGTTTTGCGTTCAGAGAAGGATTGCCCCAGAGACCCGTGGTGGACTTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR TCA 90 bp GCTGGGATTATAGGTGTGAGCTACAGGTTGGCAGGTTCTACATGGGTTTCGGCTGGCTCCCGGGCAAACTaGGGCAGAGGCCCCTGTTCT +
Preference number: 4 (lower is better)
Translates to: AGIIGVSYRLAGSTWVSAGSRAN*GRGPCS
Trigger: AGAACAGGGGCCTCTGCCTCAGTTTGCCCGGGAGCC...AGCCGAAACCCATGTAGAACCTGCCAACCTGTAGCTCACACCTATAATCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR TCA 90 bp GCTGGGATTATAGGTGTGAGCTACAGGTTGGCAGGTTCTACATGGGTTTCGGCTGAGGACACTGGCCAGTaGCCAGCGACAGGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: AGIIGVSYRLAGSTWVSAEDTGQ*PATGGQ
Trigger: CTGGCCTCCTGTCGCTGGTCACTGGCCAGTGTCCTC...AGCCGAAACCCATGTAGAACCTGCCAACCTGTAGCTCACACCTATAATCCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR TCA 90 bp GATTGGCAGAACCAAGGCACTGCCCTAGACGCTTTCCATGGAGTGGTGCCAGTTGGCAGGAGGGTCGCTTaGGGCCAGAAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: DWQNQGTALDAFHGVVPVGRRVA*GQKFKT
Trigger: GGTCTTGAACTTCTGGCCTCAAGCGACCCTCCTGCC...AACTGGCACCACTCCATGGAAAGCGTCTAGGGCAGTGCCTTGGTTCTGCCAATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR TCA 90 bp CCCGAGAGCGTGGCTTCGGGTCTACCAGATGCCTTCAAGGAAAAGGCCAGAACCGTTGCTTGGCACACCTaGTTCCTAGCAGCCTCTAGG +
Preference number: 4 (lower is better)
Translates to: PESVASGLPDAFKEKARTVAWHT*FLAASR
Trigger: CCTAGAGGCTGCTAGGAATCAGGTGTGCCAAGCAAC...GGTTCTGGCCTTTTCCTTGAAGGCATCTGGTAGACCCGAAGCCACGCTCTCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR TCA 90 bp AAAGACAAGGCATGGCTGACTCTCCAGGTTACAGCTGGAGAAGAGGGGAAAGGTCAGAGTGGCAGGTGGTaGGGCCGAGTCTGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: KDKAWLTLQVTAGEEGKGQSGRW*GRVWSS
Trigger: GGAGGACCAGACTCGGCCTCACCACCTGCCACTCTG...ACCTTTCCCCTCTTCTCCAGCTGTAACCTGGAGAGTCAGCCATGCCTTGTCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR TCA 90 bp GCTGGGATTATAGGTGTGAGCTACAGGTTGGCAGGTTCTACATGGGTTTCGGCTAGGGGAGAGGCCTCGTaGGGCTTGGGGATGCTGTGG +
Preference number: 4 (lower is better)
Translates to: AGIIGVSYRLAGSTWVSARGEAS*GLGMLW
Trigger: CCACAGCATCCCCAAGCCTCACGAGGCCTCTCCCCT...AGCCGAAACCCATGTAGAACCTGCCAACCTGTAGCTCACACCTATAATCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR TCA 90 bp CTCAGCACCCATGAAGTCCACCACGGGTCTCTGGGGCAATCCTTCTCTGAACGCACCCAGGGGAAAGGCTaGTGGGTTTCTAGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: LSTHEVHHGSLGQSFSERTQGKG*WVSSGC
Trigger: ACAGCCACTAGAAACCCATCAGCCTTTCCCCTGGGT...GCGTTCAGAGAAGGATTGCCCCAGAGACCCGTGGTGGACTTCATGGGTGCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR TCA 90 bp CGTACTTTGCAGCAGCCCTCAAATAACTCAGCCTCCTCAAGGGGGCATCTGATAAGCTCCCAGGAGGGCTaGAGAGCCCCGCATAGACCC +
Preference number: 4 (lower is better)
Translates to: RTLQQPSNNSASSRGHLISSQEG*RAPHRP
Trigger: GGGTCTATGCGGGGCTCTTCAGCCCTCCTGGGAGCT...TATCAGATGCCCCCTTGAGGAGGCTGAGTTATTTGAGGGCTGCTGCAAAGTACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR TCA 90 bp ATGAAGTCCACCACGGGTCTCTGGGGCAATCCTTCTCTGAACGCAAAACCCTGCGAGTCAGGCTCAGCCTaGCTCATGCTTGACACCCCC +
Preference number: 4 (lower is better)
Translates to: MKSTTGLWGNPSLNAKPCESGSA*LMLDTP
Trigger: GGGGGTGTCAAGCATGAGTCAGGCTGAGCCTGACTC...GCAGGGTTTTGCGTTCAGAGAAGGATTGCCCCAGAGACCCGTGGTGGACTTCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp CTTAACTTCGGCTCCCTGGTCAACTCACTTGGAGCAAGAGCACAGAGCCCGGCTCTGAACGCAAAACCCTaGCCTGGCTCTCCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: LNFGSLVNSLGARAQSPALNAKP*PGSPRS
Trigger: AGACCTGGGAGAGCCAGGGCAGGGTTTTGCGTTCAG...AGCCGGGCTCTGTGCTCTTGCTCCAAGTGAGTTGACCAGGGAGCCGAAGTTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp GACAAGGCATGGCTGACTCTCCAGGTTACAGCTGGAGAAGAGGGGAAAGGTGTTGCCCTGGCGTGCACCTaGACCCACTCAAACGCCGAA +
Preference number: 4 (lower is better)
Translates to: DKAWLTLQVTAGEEGKGVALACT*THSNAE
Trigger: TTCGGCGTTTGAGTGGGTGCAGGTGCACGCCAGGGC...AACACCTTTCCCCTCTTCTCCAGCTGTAACCTGGAGAGTCAGCCATGCCTTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp ACAGTCACTGTGTGTGGTGGGACCCAGTGTCGGCTGAGAGGCCTGGAGGGGTCTTCGCAGACAAATGTCTaGAGGGGACACAAAGGACGA +
Preference number: 4 (lower is better)
Translates to: TVTVCGGTQCRLRGLEGSSQTNV*RGHKGR
Trigger: TCGTCCTTTGTGTCCCCTGCAGACATTTGTCTGCGA...AGACCCCTCCAGGCCTCTCAGCCGACACTGGGTCCCACCACACACAGTGACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp CTGCGCCCGGCCACTAGCACAGTTATAGTTCACTGCAGCCTCTACTTCCCAGGCTTGTCCAGGCTGGAGTaGAGTGGCACGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: LRPATSTVIVHCSLYFPGLSRLE*SGTISA
Trigger: AGCTGAGATCGTGCCACTGCACTCCAGCCTGGACAA...GCCTGGGAAGTAGAGGCTGCAGTGAACTATAACTGTGCTAGTGGCCGGGCGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp CCCGAGAGCGTGGCTTCGGGTCTACCAGATGCCTTCAAGGAAAAGGCCAGAACCTGGGCACTTAATACCTaGCTGGATGCTGCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: PESVASGLPDAFKEKARTWALNT*LDAARP
Trigger: TGGCCTGGCAGCATCCAGGCAGGTATTAAGTGCCCA...GGTTCTGGCCTTTTCCTTGAAGGCATCTGGTAGACCCGAAGCCACGCTCTCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp GTCCTTCCATGCTGGCCCTTCCAGCACTCCTGCAGAGCACACTTTAGGAAACTCCCATTCTCCTGCCTCTaGCTCCCGAGCAGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: VLPCWPFQHSCRAHFRKLPFSCL*LPSSWD
Trigger: ATCCCAGCTGCTCGGGAGGCAGAGGCAGGAGAATGG...GAGTTTCCTAAAGTGTGCTCTGCAGGAGTGCTGGAAGGGCCAGCATGGAAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp GGGCAGCCTGGCTTCTCAGGATTGGCAGAACCAAGGCACTGCCCTAGACGCTTTAGGAGCCAAGCTCCATaGAAAGCCCATTCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: GQPGFSGLAEPRHCPRRFRSQAP*KAHSLG
Trigger: CCCCAGAGAATGGGCTTTGCATGGAGCTTGGCTCCT...AAAGCGTCTAGGGCAGTGCCTTGGTTCTGCCAATCCTGAGAAGCCAGGCTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp AGGGCAGCTGTTTTAAAAACCCGCACACAGGACAGTGGCTGTCTCTGCCGCACGCCAGGAGCCACCGCCTaGAGGGTAACATCTGCTTAC +
Preference number: 4 (lower is better)
Translates to: RAAVLKTRTQDSGCLCRTPGATA*RVTSAY
Trigger: GTAAGCAGATGTTACCCTGCAGGCGGTGGCTCCTGG...CGTGCGGCAGAGACAGCCACTGTCCTGTGTGCGGGTTTTTAAAACAGCTGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp GACAAGGCATGGCTGACTCTCCAGGTTACAGCTGGAGAAGAGGGGAAAGGTGTTCCACCATGGCCACCATaGCAAAGCCGGAGAGGAGGG +
Preference number: 4 (lower is better)
Translates to: DKAWLTLQVTAGEEGKGVPPWPP*QSRRGG
Trigger: CCCTCCTCTCCGGCTTTGCCATGGTGGCCATGGTGG...AACACCTTTCCCCTCTTCTCCAGCTGTAACCTGGAGAGTCAGCCATGCCTTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp AGCGTGGCTTCGGGTCTACCAGATGCCTTCAAGGAAAAGGCCAGAACCTGCACTTCGATCTCGCGGTTGTaGCGCTCCGTTTTGTGGCGC +
Preference number: 4 (lower is better)
Translates to: SVASGLPDAFKEKARTCTSISRL*RSVLWR
Trigger: GCGCCACAAAACGGAGCGCCACAACCGCGAGATCGA...AGTGCAGGTTCTGGCCTTTTCCTTGAAGGCATCTGGTAGACCCGAAGCCACGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp GATTGGCAGAACCAAGGCACTGCCCTAGACGCTTTCCATGGAGTGGTGCCAGTTATGTCTTCTCCGGCCTaGCCAGGCTGCCCACCATTG +
Preference number: 4 (lower is better)
Translates to: DWQNQGTALDAFHGVVPVMSSPA*PGCPPL
Trigger: CAATGGTGGGCAGCCTGGCCAGGCCGGAGAAGACAT...AACTGGCACCACTCCATGGAAAGCGTCTAGGGCAGTGCCTTGGTTCTGCCAATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp GCCCTGGCGTGCACCTGCACCCACTCAAACGCCGAAGCCTTCGTGTCATCACTGGAGGGGAAAGGTGTTTaGTTGTACAAGCAGCTCAGG +
Preference number: 4 (lower is better)
Translates to: ALACTCTHSNAEAFVSSLEGKGV*LYKQLR
Trigger: CCTGAGCTGCTTGTACAACCAAACACCTTTCCCCTC...CAGTGATGACACGAAGGCTTCGGCGTTTGAGTGGGTGCAGGTGCACGCCAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp AAGGAAAAGGCCAGAACCTGCACTGCACGGCACAGTCACTGTGTGTGGTGGGACGTGAGCCACCACACCTaGTCTGGAGCCCTCTGTTCT +
Preference number: 4 (lower is better)
Translates to: KEKARTCTARHSHCVWWDVSHHT*SGALCS
Trigger: AGAACAGAGGGCTCCAGACCAGGTGTGGTGGCTCAC...GTCCCACCACACACAGTGACTGTGCCGTGCAGTGCAGGTTCTGGCCTTTTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp CTTAACTTCGGCTCCCTGGTCAACTCACTTGGAGCAAGAGCACAGAGCCCGGCTACCCCCAGAACCCTCTaGGAGCTGTCAGATGGCAGA +
Preference number: 4 (lower is better)
Translates to: LNFGSLVNSLGARAQSPATPRTL*ELSDGR
Trigger: TCTGCCATCTGACAGCTCCCAGAGGGTTCTGGGGGT...AGCCGGGCTCTGTGCTCTTGCTCCAAGTGAGTTGACCAGGGAGCCGAAGTTAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR TCA 90 bp ATCCAGGGCAGCTGTTTTAAAAACCCGCACACAGGACAGTGGCTGTCTCTGCCGCTGTCCTTGAAGCTGTaGCACGAAGACCCACGGCGA +
Preference number: 4 (lower is better)
Translates to: IQGSCFKNPHTGQWLSLPLSLKL*HEDPRR
Trigger: TCGCCGTGGGTCTTCGTGTCACAGCTTCAAGGACAG...CGGCAGAGACAGCCACTGTCCTGTGTGCGGGTTTTTAAAACAGCTGCCCTGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR TCA 90 bp GACAAGGCATGGCTGACTCTCCAGGTTACAGCTGGAGAAGAGGGGAAAGGTGTTGGTGGGAGGATTGCTTaGGGCCAGCCTGGGCAACAT +
Preference number: 4 (lower is better)
Translates to: DKAWLTLQVTAGEEGKGVGGRIA*GQPGQH
Trigger: ATGTTGCCCAGGCTGGCCTCAAGCAATCCTCCCACC...AACACCTTTCCCCTCTTCTCCAGCTGTAACCTGGAGAGTCAGCCATGCCTTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp ACATCTGCTTACCGGTGTTTGGGGTGGCCATTTCCGCATCCATCAGACACTTTCGGGTGCATGCGCTCATaGGGGGACTCGCTGATGGAG +
Preference number: 4 (lower is better)
Translates to: TSAYRCLGWPFPHPSDTFGCMRS*GDSLME
Trigger: CTCCATCAGCGAGTCCCCGCATGAGCGCATGCACCC...GAAAGTGTCTGATGGATGCGGAAATGGCCACCCCAAACACCGGTAAGCAGATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp CACTCAGCACCCATGAAGTCCACCACGGGTCTCTGGGGCAATCCTTCTCTGAACACGATCTCAGCTCACTaGAACCTCTGCCTCCTGCGT +
Preference number: 4 (lower is better)
Translates to: HSAPMKSTTGLWGNPSLNTISAH*NLCLLR
Trigger: ACGCAGGAGGCAGAGGTTGCAGTGAGCTGAGATCGT...GTTCAGAGAAGGATTGCCCCAGAGACCCGTGGTGGACTTCATGGGTGCTGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp CTGCGCCCGGCCACTAGCACAGTTATAGTTCACTGCAGCCTCTACTTCCCAGGCCTTTCCATGGAGTGGTaGCAGTTGCTTGGCACACCT +
Preference number: 4 (lower is better)
Translates to: LRPATSTVIVHCSLYFPGLSMEW*QLLGTP
Trigger: AGGTGTGCCAAGCAACTGGCACCACTCCATGGAAAG...GCCTGGGAAGTAGAGGCTGCAGTGAACTATAACTGTGCTAGTGGCCGGGCGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp TCAGGCTTACGTGGTCTGGTCCTCAGCAGACCCTTCCTAGAAGACACGAAAACAAAGGCCACGCCAGGATaGTTCTGCCACAGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: SGLRGLVLSRPFLEDTKTKATPG*FCHSLA
Trigger: GGCCAGGCTGTGGCAGAAGCATCCTGGCGTGGCCTT...TGTTTTCGTGTCTTCTAGGAAGGGTCTGCTGAGGACCAGACCACGTAAGCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp GGGCAGCCTGGCTTCTCAGGATTGGCAGAACCAAGGCACTGCCCTAGACGCTTTCAGATGGCAGAGCCGTaGACTGTCTGTAAAGCAGCA +
Preference number: 4 (lower is better)
Translates to: GQPGFSGLAEPRHCPRRFQMAEP*TVCKAA
Trigger: TGCTGCTTTACAGACAGTGCACGGCTCTGCCATCTG...AAAGCGTCTAGGGCAGTGCCTTGGTTCTGCCAATCCTGAGAAGCCAGGCTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp AGGGCAGCTGTTTTAAAAACCCGCACACAGGACAGTGGCTGTCTCTGCCGCACGGCCTGTACCGAGTGGTaGTTAGAGGTGACCAGTTCC +
Preference number: 4 (lower is better)
Translates to: RAAVLKTRTQDSGCLCRTACTEW*LEVTSS
Trigger: GGAACTGGTCACCTCTAACCACCACTCGGTACAGGC...CGTGCGGCAGAGACAGCCACTGTCCTGTGTGCGGGTTTTTAAAACAGCTGCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp ATCCAGGGCAGCTGTTTTAAAAACCCGCACACAGGACAGTGGCTGTCTCTGCCGTGGAGGCCTTCAGCTTaGCCCTGCTCAGGTAGAGCT +
Preference number: 4 (lower is better)
Translates to: IQGSCFKNPHTGQWLSLPWRPSA*PCSGRA
Trigger: AGCTCTACCTGAGCAGGGCCAAGCTGAAGGCCTCCA...CGGCAGAGACAGCCACTGTCCTGTGTGCGGGTTTTTAAAACAGCTGCCCTGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp GTCCTTCCATGCTGGCCCTTCCAGCACTCCTGCAGAGCACACTTTAGGAAACTCAGTCACTGTGTGTGGTaGGACCCAGTGTCGGCTGAG +
Preference number: 4 (lower is better)
Translates to: VLPCWPFQHSCRAHFRKLSHCVW*DPVSAE
Trigger: CTCAGCCGACACTGGGTCCCACCACACACAGTGACT...GAGTTTCCTAAAGTGTGCTCTGCAGGAGTGCTGGAAGGGCCAGCATGGAAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp TCAGGCTTACGTGGTCTGGTCCTCAGCAGACCCTTCCTAGAAGACACGAAAACAACAGTCTGGGGAGTGTaGTACTGCGTGGGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: SGLRGLVLSRPFLEDTKTTVWGV*YCVGRG
Trigger: GCCCCTGCCCACGCAGTACCACACTCCCCAGACTGT...TGTTTTCGTGTCTTCTAGGAAGGGTCTGCTGAGGACCAGACCACGTAAGCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp ATCCAGGGCAGCTGTTTTAAAAACCCGCACACAGGACAGTGGCTGTCTCTGCCGTGCCTCCCGAGCAGCTaGGATTACAGGCGTGTGTCA +
Preference number: 4 (lower is better)
Translates to: IQGSCFKNPHTGQWLSLPCLPSS*DYRRVS
Trigger: TGACACACGCCTGTAATCCCAGCTGCTCGGGAGGCA...CGGCAGAGACAGCCACTGTCCTGTGTGCGGGTTTTTAAAACAGCTGCCCTGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp GAGTCACTGCGCCCGGCCCCAGTGACTATTTATGAGAACAAAAGACAAGGCATGCCGCACACAGGACAGTaGCTGTCTCTGCCGCACGTG +
Preference number: 4 (lower is better)
Translates to: ESLRPAPVTIYENKRQGMPHTGQ*LSLPHV
Trigger: CACGTGCGGCAGAGACAGCCACTGTCCTGTGTGCGG...CATGCCTTGTCTTTTGTTCTCATAAATAGTCACTGGGGCCGGGCGCAGTGACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp CTTAACTTCGGCTCCCTGGTCAACTCACTTGGAGCAAGAGCACAGAGCCCGGCTCTGGCTTCTCAGGATTaGCAGAACCAAGGCACTGCC +
Preference number: 4 (lower is better)
Translates to: LNFGSLVNSLGARAQSPALASQD*QNQGTA
Trigger: GGCAGTGCCTTGGTTCTGCCAATCCTGAGAAGCCAG...AGCCGGGCTCTGTGCTCTTGCTCCAAGTGAGTTGACCAGGGAGCCGAAGTTAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp CGTACTTTGCAGCAGCCCTCAAATAACTCAGCCTCCTCAAGGGGGCATCTGATAATCCCACAGTACCCATaGGTGGGTGGGCCGCAGACG +
Preference number: 4 (lower is better)
Translates to: RTLQQPSNNSASSRGHLIIPQYP*VGGPQT
Trigger: CGTCTGCGGCCCACCCACCCATGGGTACTGTGGGAT...TATCAGATGCCCCCTTGAGGAGGCTGAGTTATTTGAGGGCTGCTGCAAAGTACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp ATGAAGTCCACCACGGGTCTCTGGGGCAATCCTTCTCTGAACGCAAAACCCTGCAGGCCTCGTGAGGCTTaGGGATGCTGTGGAGCAAAG +
Preference number: 4 (lower is better)
Translates to: MKSTTGLWGNPSLNAKPCRPREA*GCCGAK
Trigger: CTTTGCTCCACAGCATCCCCAAGCCTCACGAGGCCT...GCAGGGTTTTGCGTTCAGAGAAGGATTGCCCCAGAGACCCGTGGTGGACTTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp GATTGGCAGAACCAAGGCACTGCCCTAGACGCTTTCCATGGAGTGGTGCCAGTTCTGGGAGCTGTCAGATaGCAGAGCCGTGCACTGTCT +
Preference number: 4 (lower is better)
Translates to: DWQNQGTALDAFHGVVPVLGAVR*QSRALS
Trigger: AGACAGTGCACGGCTCTGCCATCTGACAGCTCCCAG...AACTGGCACCACTCCATGGAAAGCGTCTAGGGCAGTGCCTTGGTTCTGCCAATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356387.6
3UTR CAA 72 bp TGCTGGGTGTGGAGTGGGTCCTTCAATGCCAGTGACTaGTGTCCTGCCCTTGACAGGGGTGGGGCAGATTTT +
Preference number: 4 (lower is better)
Translates to: CWVWSGSFNASD*CPALDRGGADF
Trigger: AAAATCTGCCCCACCCCTGTCAAGGGCAGGACACAAGTCACTGGCATTGAAGGACCCACTCCACACCCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
3UTR CAA 72 bp GCCACCGCCTGCAGGGTAACATCTGCTTACCGGTGTTaGGGGTGGCCATTTCCGCATCCATCAGACACTTTC +
Preference number: 4 (lower is better)
Translates to: ATACRVTSAYRC*GWPFPHPSDTF
Trigger: GAAAGTGTCTGATGGATGCGGAAATGGCCACCCCAAACACCGGTAAGCAGATGTTACCCTGCAGGCGGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356387.6
ENST00000495936.6
ENST00000611770.4
CDS-3UTR TCA 90 bp GCTACAGGTTGGCAGGTTCTACATGGGTTTCGGCTCCTGTGTGGGCCTTGCCCTGGCAGAAGAATTGCTTaGACCTGGGAAGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: ATGWQVLHGFRLLCGPCPGRRIA*TWEVEV
Trigger: AACCTCCACTTCCCAGGTTCAAGCAATTCTTCTGCC...AGGGCAAGGCCCACACAGGAGCCGAAACCCATGTAGAACCTGCCAACCTGTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR TCA 90 bp GCACCCATGAAGTCCACCACGGGTCTCTGGGGCAATCCTTCTCTGAACGCAAAAAGCTACTCGAAAGGCTaGGGCGGGAGGATGGCTTTA +
Preference number: 4 (lower is better)
Translates to: APMKSTTGLWGNPSLNAKSYSKG*GGRMAL
Trigger: TAAAGCCATCCTCCCGCCTCAGCCTTTCGAGTAGCT...TTTTGCGTTCAGAGAAGGATTGCCCCAGAGACCCGTGGTGGACTTCATGGGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp GTTCCACAGTCTGGGGAGTGTGGTACTGCGTGGGCAGGGGCACAGATGGTCCAGGGTCATTTATACGAATaGCAACTCAGGCTCTCCATC +
Preference number: 4 (lower is better)
Translates to: VPQSGECGTAWAGAQMVQGHLYE*QLRLSI
Trigger: GATGGAGAGCCTGAGTTGGCATTCGTATAAATGACC...CTGGACCATCTGTGCCCCTGCCCACGCAGTACCACACTCCCCAGACTGTGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp CTAAAGAGCTGGGAACAGCTTCAGAGTCAGGCTCAGCCTGACTCATGCTTGACACCTTCAGCTTGGCCCTaGTCAGGTAGAGCTTCCGCC +
Preference number: 4 (lower is better)
Translates to: LKSWEQLQSQAQPDSCLTPSAWP*SGRASA
Trigger: GGCGGAAGCTCTACCTGAGCAGGGCCAAGCTGAAGG...TGTCAAGCATGAGTCAGGCTGAGCCTGACTCTGAAGCTGTTCCCAGCTCTTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp AGGGCAGCTGTTTTAAAAACCCGCACACAGGACAGTGGCTGTCTCTGCCGCACGTCAGGTTGTGGATGTTaGTCACGGCCTCCACATTGG +
Preference number: 4 (lower is better)
Translates to: RAAVLKTRTQDSGCLCRTSGCGC*SRPPHW
Trigger: CCAATGTGGAGGCCGTGAGCAACATCCACAACCTGA...CGTGCGGCAGAGACAGCCACTGTCCTGTGTGCGGGTTTTTAAAACAGCTGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp GTCCTTCCATGCTGGCCCTTCCAGCACTCCTGCAGAGCACACTTTAGGAAACTCCCAGGAAGAGTAGGATaGCAAGCACGGTGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: VLPCWPFQHSCRAHFRKLPGRVG*QARWRS
Trigger: GCTTCTCCACCGTGCTTGGCATCCTACTCTTCCTGG...GAGTTTCCTAAAGTGTGCTCTGCAGGAGTGCTGGAAGGGCCAGCATGGAAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp GTCCTTATGGTATTAAGACAAGAGGAAAACTTTGGTCTTGAACTACCCGGCAGCCGGACCGCTGGGTGCTaGTTGGAGCCCCTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: VLMVLRQEENFGLELPGSRTAGC*LEPLLA
Trigger: GGCCAGGAGGGGCTCCAAGCAGCACCCAGCGGTCCG...GCTGCCGGGTAGTTCAAGACCAAAGTTTTCCTCTTGTCTTAATACCATAAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp AGCGTGGCTTCGGGTCTACCAGATGCCTTCAAGGAAAAGGCCAGAACCTGCACTGAAAAGGCCAGAACCTaGACTGCACGGCACAGTCAC +
Preference number: 4 (lower is better)
Translates to: SVASGLPDAFKEKARTCTEKART*TARHSH
Trigger: GTGACTGTGCCGTGCAGTGCAGGTTCTGGCCTTTTC...AGTGCAGGTTCTGGCCTTTTCCTTGAAGGCATCTGGTAGACCCGAAGCCACGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp GGGCAGCCTGGCTTCTCAGGATTGGCAGAACCAAGGCACTGCCCTAGACGCTTTAGGGTCTCTGTTCTCTaGTGCAGCCACATTTCCAGA +
Preference number: 4 (lower is better)
Translates to: GQPGFSGLAEPRHCPRRFRVSVL*CSHISR
Trigger: TCTGGAAATGTGGCTGCAGCAGAGAACAGAGACCCT...AAAGCGTCTAGGGCAGTGCCTTGGTTCTGCCAATCCTGAGAAGCCAGGCTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp ATCCAGGGCAGCTGTTTTAAAAACCCGCACACAGGACAGTGGCTGTCTCTGCCGGCTCACTGCAACCTCTaGCTCCTGCGTTCAAGCGAT +
Preference number: 4 (lower is better)
Translates to: IQGSCFKNPHTGQWLSLPAHCNL*LLRSSD
Trigger: ATCGCTTGAACGCAGGAGGCAGAGGTTGCAGTGAGC...CGGCAGAGACAGCCACTGTCCTGTGTGCGGGTTTTTAAAACAGCTGCCCTGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp AAAGGCTGGAGCTGGGAGAACGAGAACCCTAGGAGAAAGAGAACAAGAAATTCCGCCAGAGTAAGGGCCTaGTGCCTCTCCCAGCCGTGG +
Preference number: 4 (lower is better)
Translates to: KGWSWENENPRRKRTRNSARVRA*CLSQPW
Trigger: CCACGGCTGGGAGAGGCAGCAGGCCCTTACTCTGGC...GGAATTTCTTGTTCTCTTTCTCCTAGGGTTCTCGTTCTCCCAGCTCCAGCCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp ACATCTGCTTACCGGTGTTTGGGGTGGCCATTTCCGCATCCATCAGACACTTTCGCCCAAATAGGGAAGTaGCCGCTCCAAGGGCGGCTT +
Preference number: 4 (lower is better)
Translates to: TSAYRCLGWPFPHPSDTFAQIGK*PLQGRL
Trigger: AAGCCGCCCTTGGAGCGGGCACTTCCCTATTTGGGC...GAAAGTGTCTGATGGATGCGGAAATGGCCACCCCAAACACCGGTAAGCAGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp CCCGAGAGCGTGGCTTCGGGTCTACCAGATGCCTTCAAGGAAAAGGCCAGAACCGGACGTTCCTTCCCTTaGGGAGAATTCAGAGAAACG +
Preference number: 4 (lower is better)
Translates to: PESVASGLPDAFKEKARTGRSFP*GEFRET
Trigger: CGTTTCTCTGAATTCTCCCCAAGGGAAGGAACGTCC...GGTTCTGGCCTTTTCCTTGAAGGCATCTGGTAGACCCGAAGCCACGCTCTCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp AGCGTGGCTTCGGGTCTACCAGATGCCTTCAAGGAAAAGGCCAGAACCTGCACTATGCGTTCCACAGTCTaGGGAGTGTGGTACTGCGTG +
Preference number: 4 (lower is better)
Translates to: SVASGLPDAFKEKARTCTMRSTV*GVWYCV
Trigger: CACGCAGTACCACACTCCCCAGACTGTGGAACGCAT...AGTGCAGGTTCTGGCCTTTTCCTTGAAGGCATCTGGTAGACCCGAAGCCACGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp GAGTCACTGCGCCCGGCCCCAGTGACTATTTATGAGAACAAAAGACAAGGCATGCTGACCCTGTCCAGGTaGGCTCTGTTGTCGCTCAGC +
Preference number: 4 (lower is better)
Translates to: ESLRPAPVTIYENKRQGMLTLSR*ALLSLS
Trigger: GCTGAGCGACAACAGAGCCCACCTGGACAGGGTCAG...CATGCCTTGTCTTTTGTTCTCATAAATAGTCACTGGGGCCGGGCGCAGTGACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp AGCCGCTTCAGAAAGATGTTCAGGAAACACCGTTGCCTGTTTGCTCAGAGTGGCCTCTCCTCAAGGGACTaGGGGGAACGCCAAGCTGAC +
Preference number: 4 (lower is better)
Translates to: SRFRKMFRKHRCLFAQSGLSSRD*GERQAD
Trigger: GTCAGCTTGGCGTTCCCCCCAGTCCCTTGAGGAGAG...GCCACTCTGAGCAAACAGGCAACGGTGTTTCCTGAACATCTTTCTGAAGCGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp AAAGACAAGGCATGGCTGACTCTCCAGGTTACAGCTGGAGAAGAGGGGAAAGGTGCCCAAGGGGCAGCCTaGCTTCTCAGGATTGGCAGA +
Preference number: 4 (lower is better)
Translates to: KDKAWLTLQVTAGEEGKGAQGAA*LLRIGR
Trigger: TCTGCCAATCCTGAGAAGCCAGGCTGCCCCTTGGGC...ACCTTTCCCCTCTTCTCCAGCTGTAACCTGGAGAGTCAGCCATGCCTTGTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp GAGTCACTGCGCCCGGCCCCAGTGACTATTTATGAGAACAAAAGACAAGGCATGGGGGATGGTGAGGCATaGGACTGGGACACGCCCAAA +
Preference number: 4 (lower is better)
Translates to: ESLRPAPVTIYENKRQGMGDGEA*DWDTPK
Trigger: TTTGGGCGTGTCCCAGTCCCATGCCTCACCATCCCC...CATGCCTTGTCTTTTGTTCTCATAAATAGTCACTGGGGCCGGGCGCAGTGACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp GTCCTTCCATGCTGGCCCTTCCAGCACTCCTGCAGAGCACACTTTAGGAAACTCCTGCTTACCGGTGTTTaGGGTGGCCATTTCCGCATC +
Preference number: 4 (lower is better)
Translates to: VLPCWPFQHSCRAHFRKLLLTGV*GGHFRI
Trigger: GATGCGGAAATGGCCACCCCAAACACCGGTAAGCAG...GAGTTTCCTAAAGTGTGCTCTGCAGGAGTGCTGGAAGGGCCAGCATGGAAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp GCTGGGATTATAGGTGTGAGCTACAGGTTGGCAGGTTCTACATGGGTTTCGGCTGGGCGCTTACCTGGATaGGGGAGCTGCTCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: AGIIGVSYRLAGSTWVSAGRLPG*GSCSAV
Trigger: AACAGCAGAGCAGCTCCCCCATCCAGGTAAGCGCCC...AGCCGAAACCCATGTAGAACCTGCCAACCTGTAGCTCACACCTATAATCCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356387.6
3UTR CAA 72 bp TCCAAGACTGTCATCCTCCTAATCAGAGGGCTAGACTaGGATGTGGCTCCGTCCCCACCCATGTGCCACCAT +
Preference number: 4 (lower is better)
Translates to: SKTVILLIRGLD*DVAPSPPMCHH
Trigger: ATGGTGGCACATGGGTGGGGACGGAGCCACATCCAAGTCTAGCCCTCTGATTAGGAGGATGACAGTCTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
CDS-3UTR TCA 90 bp GAGTCACTGCGCCCGGCCCCAGTGACTATTTATGAGAACAAAAGACAAGGCATGCATGCGGGGACTCGCTaGTGGAGTTCAGGTTGTGGA +
Preference number: 4 (lower is better)
Translates to: ESLRPAPVTIYENKRQGMHAGTR*WSSGCG
Trigger: TCCACAACCTGAACTCCATCAGCGAGTCCCCGCATG...CATGCCTTGTCTTTTGTTCTCATAAATAGTCACTGGGGCCGGGCGCAGTGACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR TCA 90 bp AAGGGAGTGGCTGAGTCAGCCTTAGAGGCCATTCTGTGGCCGAGAGCTGGAGGCCTTTTACGAGAGATGTaGTCAGAGCATGAAGAAGCC +
Preference number: 4 (lower is better)
Translates to: KGVAESALEAILWPRAGGLLREM*SEHEEA
Trigger: GGCTTCTTCATGCTCTGATCACATCTCTCGTAAAAG...GCCTCCAGCTCTCGGCCACAGAATGGCCTCTAAGGCTGACTCAGCCACTCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR TCA 90 bp ACATCTGCTTACCGGTGTTTGGGGTGGCCATTTCCGCATCCATCAGACACTTTCGCCAGCCTGTCTTCTTaGCCCAAAGCCACTCCTTGG +
Preference number: 4 (lower is better)
Translates to: TSAYRCLGWPFPHPSDTFASLSS*PKATPW
Trigger: CCAAGGAGTGGCTTTGGGTCAAGAAGACAGGCTGGC...GAAAGTGTCTGATGGATGCGGAAATGGCCACCCCAAACACCGGTAAGCAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp GCTACAGGTTGGCAGGTTCTACATGGGTTTCGGCTCCTGTGTGGGCCTTGCCCTAGGAAAGTACATACATaGTGGAGGGCAAAGGTCGCA +
Preference number: 4 (lower is better)
Translates to: ATGWQVLHGFRLLCGPCPRKVHT*WRAKVA
Trigger: TGCGACCTTTGCCCTCCAGCATGTATGTACTTTCCT...AGGGCAAGGCCCACACAGGAGCCGAAACCCATGTAGAACCTGCCAACCTGTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp CTCAGCACCCATGAAGTCCACCACGGGTCTCTGGGGCAATCCTTCTCTGAACGCGGCGTTTCTACAGGCTaGAGGAAAGTACATACATGC +
Preference number: 4 (lower is better)
Translates to: LSTHEVHHGSLGQSFSERGVSTG*RKVHTC
Trigger: GCATGTATGTACTTTCCTGCAGCCTGTAGAAACGCC...GCGTTCAGAGAAGGATTGCCCCAGAGACCCGTGGTGGACTTCATGGGTGCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp AAAGGCTGGAGCTGGGAGAACGAGAACCCTAGGAGAAAGAGAACAAGAAATTCCAGAGTAAGGGCCTGCTaGCTCTCCCAGCCGTGGGGA +
Preference number: 4 (lower is better)
Translates to: KGWSWENENPRRKRTRNSRVRAC*LSQPWG
Trigger: TCCCCACGGCTGGGAGAGGCAGCAGGCCCTTACTCT...GGAATTTCTTGTTCTCTTTCTCCTAGGGTTCTCGTTCTCCCAGCTCCAGCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp AGCGTGGCTTCGGGTCTACCAGATGCCTTCAAGGAAAAGGCCAGAACCTGCACTATTCCTCATCGCCCATaGTGCCCTTCAAGGCGTTTC +
Preference number: 4 (lower is better)
Translates to: SVASGLPDAFKEKARTCTIPHRP*CPSRRF
Trigger: GAAACGCCTTGAAGGGCAGCATGGGCGATGAGGAAT...AGTGCAGGTTCTGGCCTTTTCCTTGAAGGCATCTGGTAGACCCGAAGCCACGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp CGTCCCCACCCATGTGCCACCATCACTGGGCACTTAATACCTGCCTGGATGCTGCTATTCCCACAGCAATaGTTTGCCTCATGCCTCGAA +
Preference number: 4 (lower is better)
Translates to: RPHPCATITGHLIPAWMLLFPQQ*FASCLE
Trigger: TTCGAGGCATGAGGCAAACCATTGCTGTGGGAATAG...CAGCATCCAGGCAGGTATTAAGTGCCCAGTGATGGTGGCACATGGGTGGGGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp GCACCCATGAAGTCCACCACGGGTCTCTGGGGCAATCCTTCTCTGAACGCAAAACCATGGCCCTACCAATaGTCACTGCTATTCCCACAG +
Preference number: 4 (lower is better)
Translates to: APMKSTTGLWGNPSLNAKPWPYQ*SLLFPQ
Trigger: CTGTGGGAATAGCAGTGACCATTGGTAGGGCCATGG...TTTTGCGTTCAGAGAAGGATTGCCCCAGAGACCCGTGGTGGACTTCATGGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp CCCGAGAGCGTGGCTTCGGGTCTACCAGATGCCTTCAAGGAAAAGGCCAGAACCATTTCTAGGCTGCAATaGCATTCCTCATCGCCCATG +
Preference number: 4 (lower is better)
Translates to: PESVASGLPDAFKEKARTISRLQ*HSSSPM
Trigger: CATGGGCGATGAGGAATGCCATTGCAGCCTAGAAAT...GGTTCTGGCCTTTTCCTTGAAGGCATCTGGTAGACCCGAAGCCACGCTCTCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp CTCAGCACGGAAAACTGCATGTCAGGGTCTCTGTTCTCTGCTGCAGCCACATTTCCACTCAGGCTTACGTaGTCTGGTCCTCAGCAGACC +
Preference number: 4 (lower is better)
Translates to: LSTENCMSGSLFSAAATFPLRLT*SGPQQT
Trigger: GGTCTGCTGAGGACCAGACCACGTAAGCCTGAGTGG...AAATGTGGCTGCAGCAGAGAACAGAGACCCTGACATGCAGTTTTCCGTGCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp AAAGGCTGGAGCTGGGAGAACGAGAACCCTAGGAGAAAGAGAACAAGAAATTCCAGCCTGGGAGGACACTaGCCAGTGACCAGCGACAGG +
Preference number: 4 (lower is better)
Translates to: KGWSWENENPRRKRTRNSSLGGH*PVTSDR
Trigger: CCTGTCGCTGGTCACTGGCCAGTGTCCTCCCAGGCT...GGAATTTCTTGTTCTCTTTCTCCTAGGGTTCTCGTTCTCCCAGCTCCAGCCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp CTCAGCACGGAAAACTGCATGTCAGGGTCTCTGTTCTCTGCTGCAGCCACATTTACTCCAGCTCTGGCCTaGGCAATAGAGCCCAACCCT +
Preference number: 4 (lower is better)
Translates to: LSTENCMSGSLFSAAATFTPALA*AIEPNP
Trigger: AGGGTTGGGCTCTATTGCCCAGGCCAGAGCTGGAGT...AAATGTGGCTGCAGCAGAGAACAGAGACCCTGACATGCAGTTTTCCGTGCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp AGCGTGGCTTCGGGTCTACCAGATGCCTTCAAGGAAAAGGCCAGAACCTGCACTATTAGCAGGGCATGGTaGTGGTGCATGCCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: SVASGLPDAFKEKARTCTISRAW*WCMPVV
Trigger: GACTACAGGCATGCACCACCACCATGCCCTGCTAAT...AGTGCAGGTTCTGGCCTTTTCCTTGAAGGCATCTGGTAGACCCGAAGCCACGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp AAGGAAAAGGCCAGAACCTGCACTGCACGGCACAGTCACTGTGTGTGGTGGGACCCACTCTCATGCTCTTaGAGCTTCAAGCAAGGGGAT +
Preference number: 4 (lower is better)
Translates to: KEKARTCTARHSHCVWWDPLSCS*SFKQGD
Trigger: ATCCCCTTGCTTGAAGCTCCAAGAGCATGAGAGTGG...GTCCCACCACACACAGTGACTGTGCCGTGCAGTGCAGGTTCTGGCCTTTTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp CCCGAGAGCGTGGCTTCGGGTCTACCAGATGCCTTCAAGGAAAAGGCCAGAACCGGATGCTCCAACATCTaGAGAACGATGCACATAGAG +
Preference number: 4 (lower is better)
Translates to: PESVASGLPDAFKEKARTGCSNI*RTMHIE
Trigger: CTCTATGTGCATCGTTCTCCAGATGTTGGAGCATCC...GGTTCTGGCCTTTTCCTTGAAGGCATCTGGTAGACCCGAAGCCACGCTCTCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp GGGCAGCCTGGCTTCTCAGGATTGGCAGAACCAAGGCACTGCCCTAGACGCTTTTTAACTTCGGCTCCCTaGTCAACTCACTTGGAGCAA +
Preference number: 4 (lower is better)
Translates to: GQPGFSGLAEPRHCPRRFLTSAP*STHLEQ
Trigger: TTGCTCCAAGTGAGTTGACCAGGGAGCCGAAGTTAA...AAAGCGTCTAGGGCAGTGCCTTGGTTCTGCCAATCCTGAGAAGCCAGGCTGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp GTTCCACAGTCTGGGGAGTGTGGTACTGCGTGGGCAGGGGCACAGATGGTCCAGTTTAGACTAAAGAGCTaGGAACAGCTTCAGAGTCAG +
Preference number: 4 (lower is better)
Translates to: VPQSGECGTAWAGAQMVQFRLKS*EQLQSQ
Trigger: CTGACTCTGAAGCTGTTCCCAGCTCTTTAGTCTAAA...CTGGACCATCTGTGCCCCTGCCCACGCAGTACCACACTCCCCAGACTGTGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR TCA 90 bp TTGAACCAAACGGTTCTATCTCAGGAGAAGTCATCCAGTCCTTATGGTATTAAGACATCCCCCAGGGCCTaGCCCCACTGCCGAGGGCTG +
Preference number: 4 (lower is better)
Translates to: LNQTVLSQEKSSSPYGIKTSPRA*PHCRGL
Trigger: CAGCCCTCGGCAGTGGGGTCAGGCCCTGGGGGATGT...CTTAATACCATAAGGACTGGATGACTTCTCCTGAGATAGAACCGTTTGGTTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR TCA 90 bp GTCCTTCCATGCTGGCCCTTCCAGCACTCCTGCAGAGCACACTTTAGGAAACTCTGCGCCCGGCCCCAGTaGCTATTTATGAGAACAAAA +
Preference number: 4 (lower is better)
Translates to: VLPCWPFQHSCRAHFRKLCARPQ*LFMRTK
Trigger: TTTTGTTCTCATAAATAGTCACTGGGGCCGGGCGCA...GAGTTTCCTAAAGTGTGCTCTGCAGGAGTGCTGGAAGGGCCAGCATGGAAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR TCA 90 bp CACATTCCGCCTTCCAAGTTTCTAAACCAGAAACACCTGCGTTTTGAAACAGGTCCCAAAGTGCTGGGATaGCAGGCGTGCCCCACCTCG +
Preference number: 4 (lower is better)
Translates to: HIPPSKFLNQKHLRFETGPKVLG*QACPTS
Trigger: CGAGGTGGGGCACGCCTGTCATCCCAGCACTTTGGG...ACCTGTTTCAAAACGCAGGTGTTTCTGGTTTAGAAACTTGGAAGGCGGAATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR TCA 90 bp AGCCGCTTCAGAAAGATGTTCAGGAAACACCGTTGCCTGTTTGCTCAGAGTGGCGCATTCCAGCTTGGGTaGCAGAGCGACTCTGTCTCA +
Preference number: 4 (lower is better)
Translates to: SRFRKMFRKHRCLFAQSGAFQLG*QSDSVS
Trigger: TGAGACAGAGTCGCTCTGTCACCCAAGCTGGAATGC...GCCACTCTGAGCAAACAGGCAACGGTGTTTCCTGAACATCTTTCTGAAGCGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR TCA 90 bp ATGAAGTCCACCACGGGTCTCTGGGGCAATCCTTCTCTGAACGCAAAACCCTGCGCCTGGACGACAGAGTaGGACTCTATCTGGGAAAAA +
Preference number: 4 (lower is better)
Translates to: MKSTTGLWGNPSLNAKPCAWTTE*DSIWEK
Trigger: TTTTTCCCAGATAGAGTCTCACTCTGTCGTCCAGGC...GCAGGGTTTTGCGTTCAGAGAAGGATTGCCCCAGAGACCCGTGGTGGACTTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp AAAGGCTGGAGCTGGGAGAACGAGAACCCTAGGAGAAAGAGAACAAGAAATTCCCCGTCCCCACCCATGTaGCACCATCACTGGGCACTT +
Preference number: 4 (lower is better)
Translates to: KGWSWENENPRRKRTRNSPSPPM*HHHWAL
Trigger: AAGTGCCCAGTGATGGTGGCACATGGGTGGGGACGG...GGAATTTCTTGTTCTCTTTCTCCTAGGGTTCTCGTTCTCCCAGCTCCAGCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp CACATTCCGCCTTCCAAGTTTCTAAACCAGAAACACCTGCGTTTTGAAACAGGTTCTCGAGGGGGCCAGTaGAGGGTCTCTGCCCCTGAC +
Preference number: 4 (lower is better)
Translates to: HIPPSKFLNQKHLRFETGSRGGQ*RVSAPD
Trigger: GTCAGGGGCAGAGACCCTGCACTGGCCCCCTCGAGA...ACCTGTTTCAAAACGCAGGTGTTTCTGGTTTAGAAACTTGGAAGGCGGAATGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp ACGGTTCTATCTCAGGAGAAGTCATCCAGTCCTTATGGTATTAAGACAAGAGGATCTGTGGCCGAGAGCTaGAGGCCAGTGGCTGCGGGG +
Preference number: 4 (lower is better)
Translates to: TVLSQEKSSSPYGIKTRGSVAES*RPVAAG
Trigger: CCCCGCAGCCACTGGCCTCCAGCTCTCGGCCACAGA...TCCTCTTGTCTTAATACCATAAGGACTGGATGACTTCTCCTGAGATAGAACCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp CTTAACTTCGGCTCCCTGGTCAACTCACTTGGAGCAAGAGCACAGAGCCCGGCTAAAGTACATACATGCTaGAGGGCAAAGGTCGCAGAC +
Preference number: 4 (lower is better)
Translates to: LNFGSLVNSLGARAQSPAKVHTC*RAKVAD
Trigger: GTCTGCGACCTTTGCCCTCCAGCATGTATGTACTTT...AGCCGGGCTCTGTGCTCTTGCTCCAAGTGAGTTGACCAGGGAGCCGAAGTTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp GTCCTTATGGTATTAAGACAAGAGGAAAACTTTGGTCTTGAACTACCCGGCAGCAGGATGGGCCCTGGCTaGCTCCCGGGCAAACTGAGG +
Preference number: 4 (lower is better)
Translates to: VLMVLRQEENFGLELPGSRMGPG*LPGKLR
Trigger: CCTCAGTTTGCCCGGGAGCCAGCCAGGGCCCATCCT...GCTGCCGGGTAGTTCAAGACCAAAGTTTTCCTCTTGTCTTAATACCATAAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp ACATCTGCTTACCGGTGTTTGGGGTGGCCATTTCCGCATCCATCAGACACTTTCTTTCAGGCCACGATGTaGGTCCCCCAGTCAGCAGAT +
Preference number: 4 (lower is better)
Translates to: TSAYRCLGWPFPHPSDTFFQATM*VPQSAD
Trigger: ATCTGCTGACTGGGGGACCCACATCGTGGCCTGAAA...GAAAGTGTCTGATGGATGCGGAAATGGCCACCCCAAACACCGGTAAGCAGATGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp AAAGGCTGGAGCTGGGAGAACGAGAACCCTAGGAGAAAGAGAACAAGAAATTCCCTTTCTCGAGGCTTGTaGGCTTGCTGGCCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: KGWSWENENPRRKRTRNSLSRGL*ACWPGA
Trigger: AGCCCCAGGCCAGCAAGCCCACAAGCCTCGAGAAAG...GGAATTTCTTGTTCTCTTTCTCCTAGGGTTCTCGTTCTCCCAGCTCCAGCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR TCA 90 bp ACGGTTCTATCTCAGGAGAAGTCATCCAGTCCTTATGGTATTAAGACAAGAGGAGCTCCTGTCTTCCCCTaGAGCCAGGCCACCCAGCTC +
Preference number: 4 (lower is better)
Translates to: TVLSQEKSSSPYGIKTRGAPVFP*SQATQL
Trigger: GAGCTGGGTGGCCTGGCTTCAGGGGAAGACAGGAGC...TCCTCTTGTCTTAATACCATAAGGACTGGATGACTTCTCCTGAGATAGAACCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR TCA 90 bp AAAGACAAGGCATGGCTGACTCTCCAGGTTACAGCTGGAGAAGAGGGGAAAGGTTCTGATAGATGCCCGTaGACATGTCTTCTCCGGCCT +
Preference number: 4 (lower is better)
Translates to: KDKAWLTLQVTAGEEGKGSDRCP*TCLLRP
Trigger: AGGCCGGAGAAGACATGTTCACGGGCATCTATCAGA...ACCTTTCCCCTCTTCTCCAGCTGTAACCTGGAGAGTCAGCCATGCCTTGTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR TCA 90 bp TCAGGCTTACGTGGTCTGGTCCTCAGCAGACCCTTCCTAGAAGACACGAAAACATGTAGTGCAATGGCGTaGTCTCAGCTCACTGCAACC +
Preference number: 4 (lower is better)
Translates to: SGLRGLVLSRPFLEDTKTCSAMA*SQLTAT
Trigger: GGTTGCAGTGAGCTGAGATCACGCCATTGCACTACA...TGTTTTCGTGTCTTCTAGGAAGGGTCTGCTGAGGACCAGACCACGTAAGCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR TCA 90 bp GTCCTTCCATGCTGGCCCTTCCAGCACTCCTGCAGAGCACACTTTAGGAAACTCCTGGTCTTAAAGTCCTaGTCTCAAGTGATCTGCCTG +
Preference number: 4 (lower is better)
Translates to: VLPCWPFQHSCRAHFRKLLVLKS*SQVICL
Trigger: CAGGCAGATCACTTGAGATCAGGACTTTAAGACCAG...GAGTTTCCTAAAGTGTGCTCTGCAGGAGTGCTGGAAGGGCCAGCATGGAAGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR TCA 90 bp AGGGCAGCTGTTTTAAAAACCCGCACACAGGACAGTGGCTGTCTCTGCCGCACGTCCTTGGAGGAACGCTaGCATGCTGACATTCTTTTT +
Preference number: 4 (lower is better)
Translates to: RAAVLKTRTQDSGCLCRTSLEER*HADILF
Trigger: AAAAAGAATGTCAGCATGTCAGCGTTCCTCCAAGGA...CGTGCGGCAGAGACAGCCACTGTCCTGTGTGCGGGTTTTTAAAACAGCTGCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR TCA 90 bp ATCCAGGGCAGCTGTTTTAAAAACCCGCACACAGGACAGTGGCTGTCTCTGCCGGAAACACCTGCGTTTTaGAACAGGTGGTCAGGTACT +
Preference number: 4 (lower is better)
Translates to: IQGSCFKNPHTGQWLSLPETPAF*NRWSGT
Trigger: AGTACCTGACCACCTGTTTCAAAACGCAGGTGTTTC...CGGCAGAGACAGCCACTGTCCTGTGTGCGGGTTTTTAAAACAGCTGCCCTGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR TCA 90 bp CTCAGCACGGAAAACTGCATGTCAGGGTCTCTGTTCTCTGCTGCAGCCACATTTGGCAAGATAATTGCTTaGACCTGGGAGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: LSTENCMSGSLFSAAATFGKIIA*TWEAEV
Trigger: AACCTCCGCCTCCCAGGTTCAAGCAATTATCTTGCC...AAATGTGGCTGCAGCAGAGAACAGAGACCCTGACATGCAGTTTTCCGTGCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp ATGAAGTCCACCACGGGTCTCTGGGGCAATCCTTCTCTGAACGCAAAACCCTGCGAGCCTAGCGTACTTTaGAGCAGCCCTCAAATAACT +
Preference number: 4 (lower is better)
Translates to: MKSTTGLWGNPSLNAKPCEPSVL*SSPQIT
Trigger: AGTTATTTGAGGGCTGCTGCAAAGTACGCTAGGCTC...GCAGGGTTTTGCGTTCAGAGAAGGATTGCCCCAGAGACCCGTGGTGGACTTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp ACGGTTCTATCTCAGGAGAAGTCATCCAGTCCTTATGGTATTAAGACAAGAGGATCCGGCCCCCGGGGATaGCACAACTTTCTCGTGGGG +
Preference number: 4 (lower is better)
Translates to: TVLSQEKSSSPYGIKTRGSGPRG*HNFLVG
Trigger: CCCCACGAGAAAGTTGTGGCATCCCCGGGGGCCGGA...TCCTCTTGTCTTAATACCATAAGGACTGGATGACTTCTCCTGAGATAGAACCGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp ATCCAGGGCAGCTGTTTTAAAAACCCGCACACAGGACAGTGGCTGTCTCTGCCGACCGAATTTCTAGGCTaGAATGGCATTCCTCATCGC +
Preference number: 4 (lower is better)
Translates to: IQGSCFKNPHTGQWLSLPTEFLG*NGIPHR
Trigger: GCGATGAGGAATGCCATTGCAGCCTAGAAATTCGGT...CGGCAGAGACAGCCACTGTCCTGTGTGCGGGTTTTTAAAACAGCTGCCCTGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp GAGTCACTGCGCCCGGCCCCAGTGACTATTTATGAGAACAAAAGACAAGGCATGTGGAGTGGTGCCAGTTaGTTGGCACACCTGATTCCT +
Preference number: 4 (lower is better)
Translates to: ESLRPAPVTIYENKRQGMWSGAS*LAHLIP
Trigger: AGGAATCAGGTGTGCCAAGCAACTGGCACCACTCCA...CATGCCTTGTCTTTTGTTCTCATAAATAGTCACTGGGGCCGGGCGCAGTGACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp AAAGACAAGGCATGGCTGACTCTCCAGGTTACAGCTGGAGAAGAGGGGAAAGGTCTGCAGGGTAACATCTaGTTACCGGTGTTTGGGGTG +
Preference number: 4 (lower is better)
Translates to: KDKAWLTLQVTAGEEGKGLQGNI*LPVFGV
Trigger: CACCCCAAACACCGGTAAGCAGATGTTACCCTGCAG...ACCTTTCCCCTCTTCTCCAGCTGTAACCTGGAGAGTCAGCCATGCCTTGTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp AAAGGCTGGAGCTGGGAGAACGAGAACCCTAGGAGAAAGAGAACAAGAAATTCCGCAGTGGCACCATCTTaGCTCACTGCTACCTCTGCC +
Preference number: 4 (lower is better)
Translates to: KGWSWENENPRRKRTRNSAVAPS*LTATSA
Trigger: GGCAGAGGTAGCAGTGAGCCAAGATGGTGCCACTGC...GGAATTTCTTGTTCTCTTTCTCCTAGGGTTCTCGTTCTCCCAGCTCCAGCCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp CTAAAGAGCTGGGAACAGCTTCAGAGTCAGGCTCAGCCTGACTCATGCTTGACATACCGGTGTTTGGGGTaGCCATTTCCGCATCCATCA +
Preference number: 4 (lower is better)
Translates to: LKSWEQLQSQAQPDSCLTYRCLG*PFPHPS
Trigger: TGATGGATGCGGAAATGGCCACCCCAAACACCGGTA...TGTCAAGCATGAGTCAGGCTGAGCCTGACTCTGAAGCTGTTCCCAGCTCTTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR TCA 90 bp AGCGTGGCTTCGGGTCTACCAGATGCCTTCAAGGAAAAGGCCAGAACCTGCACTAACACAGTCCCTCATTaGACCAAACGGTTCTATCTC +
Preference number: 4 (lower is better)
Translates to: SVASGLPDAFKEKARTCTNTVPH*TKRFYL
Trigger: GAGATAGAACCGTTTGGTTCAATGAGGGACTGTGTT...AGTGCAGGTTCTGGCCTTTTCCTTGAAGGCATCTGGTAGACCCGAAGCCACGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR TCA 90 bp AGGTTTCCTCTCCCGGCCACCATGGCCCTACCAATGGTCACTGCTATTCCCACAGATGTGATCAGAGCATaGAGAAGCCCAGTGATTTTT +
Preference number: 4 (lower is better)
Translates to: RFPLPATMALPMVTAIPTDVIRA*RSPVIF
Trigger: AAAAATCACTGGGCTTCTTCATGCTCTGATCACATC...TGTGGGAATAGCAGTGACCATTGGTAGGGCCATGGTGGCCGGGAGAGGAAACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp CGTACTTTGCAGCAGCCCTCAAATAACTCAGCCTCCTCAAGGGGGCATCTGATAACTACCCGGCAGCCTTaGAAAATGTCTGCATCTGAC +
Preference number: 4 (lower is better)
Translates to: RTLQQPSNNSASSRGHLITTRQP*KMSASD
Trigger: GTCAGATGCAGACATTTTGCAAGGCTGCCGGGTAGT...TATCAGATGCCCCCTTGAGGAGGCTGAGTTATTTGAGGGCTGCTGCAAAGTACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp GCTGGGATTATAGGTGTGAGCTACAGGTTGGCAGGTTCTACATGGGTTTCGGCTCTCAGCACGGAAAACTaGATGTCAGGGTCTCTGTTC +
Preference number: 4 (lower is better)
Translates to: AGIIGVSYRLAGSTWVSALSTEN*MSGSLF
Trigger: GAACAGAGACCCTGACATGCAGTTTTCCGTGCTGAG...AGCCGAAACCCATGTAGAACCTGCCAACCTGTAGCTCACACCTATAATCCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp AGTCCCTCATTGAACCAAACGGTTCTATCTCAGGAGAAGTCATCCAGTCCTTATCCAGGCCAAGAGCTCTaGCTGGGGACCAGGTACAGT +
Preference number: 4 (lower is better)
Translates to: SPSLNQTVLSQEKSSSPYPGQEL*LGTRYS
Trigger: ACTGTACCTGGTCCCCAGGCAGAGCTCTTGGCCTGG...ATAAGGACTGGATGACTTCTCCTGAGATAGAACCGTTTGGTTCAATGAGGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp CTAAAGAGCTGGGAACAGCTTCAGAGTCAGGCTCAGCCTGACTCATGCTTGACACGTGAGGCTTGGGGATaGTGTGGAGCAAAGAAATCT +
Preference number: 4 (lower is better)
Translates to: LKSWEQLQSQAQPDSCLTREAWG*CGAKKS
Trigger: AGATTTCTTTGCTCCACAGCATCCCCAAGCCTCACG...TGTCAAGCATGAGTCAGGCTGAGCCTGACTCTGAAGCTGTTCCCAGCTCTTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp GTCCTTATGGTATTAAGACAAGAGGAAAACTTTGGTCTTGAACTACCCGGCAGCGCCAAGGAACCAGCCTaGCTTTGCCCCCAACGCTCT +
Preference number: 4 (lower is better)
Translates to: VLMVLRQEENFGLELPGSAKEPA*LCPQRS
Trigger: AGAGCGTTGGGGGCAAAGCCAGGCTGGTTCCTTGGC...GCTGCCGGGTAGTTCAAGACCAAAGTTTTCCTCTTGTCTTAATACCATAAGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp GCTGGGATTATAGGTGTGAGCTACAGGTTGGCAGGTTCTACATGGGTTTCGGCTTCTCCAGGTTACAGCTaGAGAAGAGGGGAAAGGTGT +
Preference number: 4 (lower is better)
Translates to: AGIIGVSYRLAGSTWVSASPGYS*RRGERC
Trigger: ACACCTTTCCCCTCTTCTCCAGCTGTAACCTGGAGA...AGCCGAAACCCATGTAGAACCTGCCAACCTGTAGCTCACACCTATAATCCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp GCTGGGATTATAGGTGTGAGCTACAGGTTGGCAGGTTCTACATGGGTTTCGGCTCCACCACACCTGGTCTaGAGCCCTCTGTTCTTAAAT +
Preference number: 4 (lower is better)
Translates to: AGIIGVSYRLAGSTWVSAPPHLV*SPLFLN
Trigger: ATTTAAGAACAGAGGGCTCCAGACCAGGTGTGGTGG...AGCCGAAACCCATGTAGAACCTGCCAACCTGTAGCTCACACCTATAATCCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp GACAAGGCATGGCTGACTCTCCAGGTTACAGCTGGAGAAGAGGGGAAAGGTGTTCCCTTCTTTTGTTTCTaGAAAGAGAGGGCCCTGTCT +
Preference number: 4 (lower is better)
Translates to: DKAWLTLQVTAGEEGKGVPFFCF*KERALS
Trigger: AGACAGGGCCCTCTCTTTCCAGAAACAAAAGAAGGG...AACACCTTTCCCCTCTTCTCCAGCTGTAACCTGGAGAGTCAGCCATGCCTTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp AGCCGCTTCAGAAAGATGTTCAGGAAACACCGTTGCCTGTTTGCTCAGAGTGGCAGTTCGAGACCAGCTTaGCTAACATGGAGAAACCCC +
Preference number: 4 (lower is better)
Translates to: SRFRKMFRKHRCLFAQSGSSRPA*LTWRNP
Trigger: GGGGTTTCTCCATGTTAGCCAAGCTGGTCTCGAACT...GCCACTCTGAGCAAACAGGCAACGGTGTTTCCTGAACATCTTTCTGAAGCGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp CACATTCCGCCTTCCAAGTTTCTAAACCAGAAACACCTGCGTTTTGAAACAGGTTCCAAGGGCGGCTTCTaGAGACATCCCGCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: HIPPSKFLNQKHLRFETGSKGGF*RHPAPE
Trigger: CTCTGGAGCGGGATGTCTCCAGAAGCCGCCCTTGGA...ACCTGTTTCAAAACGCAGGTGTTTCTGGTTTAGAAACTTGGAAGGCGGAATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp CTCAGCACGGAAAACTGCATGTCAGGGTCTCTGTTCTCTGCTGCAGCCACATTTTTCCTCACCACCTGCTaGGAACTAAATCCAGGGGAA +
Preference number: 4 (lower is better)
Translates to: LSTENCMSGSLFSAAATFFLTTC*ELNPGE
Trigger: TTCCCCTGGATTTAGTTCCCAGCAGGTGGTGAGGAA...AAATGTGGCTGCAGCAGAGAACAGAGACCCTGACATGCAGTTTTCCGTGCTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp CTGCGCCCGGCCACTAGCACAGTTATAGTTCACTGCAGCCTCTACTTCCCAGGCATGCATCTATTTTCATaGGGTTTCCCGATATCTCAC +
Preference number: 4 (lower is better)
Translates to: LRPATSTVIVHCSLYFPGMHLFS*GFPISH
Trigger: GTGAGATATCGGGAAACCCCATGAAAATAGATGCAT...GCCTGGGAAGTAGAGGCTGCAGTGAACTATAACTGTGCTAGTGGCCGGGCGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356387.6
3UTR CAA 72 bp CCTACCAATGGTCACTGCTATTCCCACAGCAATGGTTaGCCTCATGCCTCGAAACTAGAAAGGCTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: PTNGHCYSHSNG*PHASKLERLEL
Trigger: CAGCTCCAGCCTTTCTAGTTTCGAGGCATGAGGCAAACCATTGCTGTGGGAATAGCAGTGACCATTGGTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356387.6
ENST00000478730.6
ENST00000495936.6
ENST00000611770.4
CDS-3UTR TCA 90 bp ACGGTTCTATCTCAGGAGAAGTCATCCAGTCCTTATGGTATTAAGACAAGAGGACGTCCAGCTGGACCTTaGGCTTGTGGAGCTCCTCGA +
Preference number: 4 (lower is better)
Translates to: TVLSQEKSSSPYGIKTRGRPAGP*ACGAPR
Trigger: TCGAGGAGCTCCACAAGCTCAAGGTCCAGCTGGACG...TCCTCTTGTCTTAATACCATAAGGACTGGATGACTTCTCCTGAGATAGAACCGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR TCA 90 bp AGTCCCTCATTGAACCAAACGGTTCTATCTCAGGAGAAGTCATCCAGTCCTTATGGGCTCTGCAGCATCTaGGGCAAAAAGTCTTGGGCC +
Preference number: 4 (lower is better)
Translates to: SPSLNQTVLSQEKSSSPYGLCSI*GKKSWA
Trigger: GGCCCAAGACTTTTTGCCTCAGATGCTGCAGAGCCC...ATAAGGACTGGATGACTTCTCCTGAGATAGAACCGTTTGGTTCAATGAGGGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR TCA 90 bp AGCGTGGCTTCGGGTCTACCAGATGCCTTCAAGGAAAAGGCCAGAACCTGCACTTACCTGTTAAGTTTGTaGTACCAGAGTTGGGTCTGT +
Preference number: 4 (lower is better)
Translates to: SVASGLPDAFKEKARTCTYLLSL*YQSWVC
Trigger: ACAGACCCAACTCTGGTATCACAAACTTAACAGGTA...AGTGCAGGTTCTGGCCTTTTCCTTGAAGGCATCTGGTAGACCCGAAGCCACGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp CACATTCCGCCTTCCAAGTTTCTAAACCAGAAACACCTGCGTTTTGAAACAGGTCCTCATCGCCCATGCTaGCCTTCAAGGCGTTTCTGC +
Preference number: 4 (lower is better)
Translates to: HIPPSKFLNQKHLRFETGPHRPC*PSRRFC
Trigger: GCAGAAACGCCTTGAAGGGCAGCATGGGCGATGAGG...ACCTGTTTCAAAACGCAGGTGTTTCTGGTTTAGAAACTTGGAAGGCGGAATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp GTCCTTCCATGCTGGCCCTTCCAGCACTCCTGCAGAGCACACTTTAGGAAACTCATCTACATAACGCCATaGATAGATCATCAGCACGAG +
Preference number: 4 (lower is better)
Translates to: VLPCWPFQHSCRAHFRKLIYITP*IDHQHE
Trigger: CTCGTGCTGATGATCTATGCATGGCGTTATGTAGAT...GAGTTTCCTAAAGTGTGCTCTGCAGGAGTGCTGGAAGGGCCAGCATGGAAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp CGTACTTTGCAGCAGCCCTCAAATAACTCAGCCTCCTCAAGGGGGCATCTGATAGCTTGGCAGAAGAATTaGTTGAACCTGGGAAGTGGA +
Preference number: 4 (lower is better)
Translates to: RTLQQPSNNSASSRGHLIAWQKN*LNLGSG
Trigger: TCCACTTCCCAGGTTCAAGCAATTCTTCTGCCAAGC...TATCAGATGCCCCCTTGAGGAGGCTGAGTTATTTGAGGGCTGCTGCAAAGTACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp CACATTCCGCCTTCCAAGTTTCTAAACCAGAAACACCTGCGTTTTGAAACAGGTCAACGGGCCCCTCACTaGGCATCCAGATGTGAGTCA +
Preference number: 4 (lower is better)
Translates to: HIPPSKFLNQKHLRFETGQRAPH*ASRCES
Trigger: TGACTCACATCTGGATGCGCAGTGAGGGGCCCGTTG...ACCTGTTTCAAAACGCAGGTGTTTCTGGTTTAGAAACTTGGAAGGCGGAATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp CCAGTCCTTATGGTATTAAGACAAGAGGAAAACTTTGGTCTTGAACTACCCGGCCAGGCTTACGTGGTCTaGTCCTCAGCAGACCCTTCC +
Preference number: 4 (lower is better)
Translates to: PVLMVLRQEENFGLELPGQAYVV*SSADPS
Trigger: GGAAGGGTCTGCTGAGGACCAGACCACGTAAGCCTG...GCCGGGTAGTTCAAGACCAAAGTTTTCCTCTTGTCTTAATACCATAAGGACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp GTCCTTATGGTATTAAGACAAGAGGAAAACTTTGGTCTTGAACTACCCGGCAGCTGGTCTCGAACTCCTTaGCTCAAGCGATCCGCCCAC +
Preference number: 4 (lower is better)
Translates to: VLMVLRQEENFGLELPGSWSRTP*LKRSAH
Trigger: GTGGGCGGATCGCTTGAGCCAAGGAGTTCGAGACCA...GCTGCCGGGTAGTTCAAGACCAAAGTTTTCCTCTTGTCTTAATACCATAAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp ACGGTTCTATCTCAGGAGAAGTCATCCAGTCCTTATGGTATTAAGACAAGAGGACTTACCCAACCAGGATaGGGCTGGAGAAGGCCACGC +
Preference number: 4 (lower is better)
Translates to: TVLSQEKSSSPYGIKTRGLTQPG*GWRRPR
Trigger: GCGTGGCCTTCTCCAGCCCCATCCTGGTTGGGTAAG...TCCTCTTGTCTTAATACCATAAGGACTGGATGACTTCTCCTGAGATAGAACCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp ACGGTTCTATCTCAGGAGAAGTCATCCAGTCCTTATGGTATTAAGACAAGAGGAGGCCAGAACCTGCACTaGACGGCACAGTCACTGTGT +
Preference number: 4 (lower is better)
Translates to: TVLSQEKSSSPYGIKTRGGQNLH*TAQSLC
Trigger: ACACAGTGACTGTGCCGTGCAGTGCAGGTTCTGGCC...TCCTCTTGTCTTAATACCATAAGGACTGGATGACTTCTCCTGAGATAGAACCGT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp GTCCTTATGGTATTAAGACAAGAGGAAAACTTTGGTCTTGAACTACCCGGCAGCAGATGGCACTGGAGATaGGTTCCACAGTCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: VLMVLRQEENFGLELPGSRWHWR*VPQSGE
Trigger: CTCCCCAGACTGTGGAACGCATCTCCAGTGCCATCT...GCTGCCGGGTAGTTCAAGACCAAAGTTTTCCTCTTGTCTTAATACCATAAGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp CTAAAGAGCTGGGAACAGCTTCAGAGTCAGGCTCAGCCTGACTCATGCTTGACACAATGGTTTGCCTCATaGCTCGAAACTAGAAAGGCT +
Preference number: 4 (lower is better)
Translates to: LKSWEQLQSQAQPDSCLTQWFAS*LETRKA
Trigger: AGCCTTTCTAGTTTCGAGGCATGAGGCAAACCATTG...TGTCAAGCATGAGTCAGGCTGAGCCTGACTCTGAAGCTGTTCCCAGCTCTTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp CACATTCCGCCTTCCAAGTTTCTAAACCAGAAACACCTGCGTTTTGAAACAGGTTCCACCACGGGTCTCTaGGGCAATCCTTCTCTGAAC +
Preference number: 4 (lower is better)
Translates to: HIPPSKFLNQKHLRFETGSTTGL*GNPSLN
Trigger: GTTCAGAGAAGGATTGCCCCAGAGACCCGTGGTGGA...ACCTGTTTCAAAACGCAGGTGTTTCTGGTTTAGAAACTTGGAAGGCGGAATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp GTCCTTATGGTATTAAGACAAGAGGAAAACTTTGGTCTTGAACTACCCGGCAGCCCTGGTCAACTCACTTaGAGCAAGAGCACAGAGCCC +
Preference number: 4 (lower is better)
Translates to: VLMVLRQEENFGLELPGSPGQLT*SKSTEP
Trigger: GGGCTCTGTGCTCTTGCTCCAAGTGAGTTGACCAGG...GCTGCCGGGTAGTTCAAGACCAAAGTTTTCCTCTTGTCTTAATACCATAAGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp CTCAGCACGGAAAACTGCATGTCAGGGTCTCTGTTCTCTGCTGCAGCCACATTTTCTCTCCCACCACTATaGGACAAAATGTTCAGTTCC +
Preference number: 4 (lower is better)
Translates to: LSTENCMSGSLFSAAATFSLPPL*DKMFSS
Trigger: GGAACTGAACATTTTGTCCCATAGTGGTGGGAGAGA...AAATGTGGCTGCAGCAGAGAACAGAGACCCTGACATGCAGTTTTCCGTGCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp CACATTCCGCCTTCCAAGTTTCTAAACCAGAAACACCTGCGTTTTGAAACAGGTGCAATTTATCCCCTCTaGCCACAGCATCCCCCAAGA +
Preference number: 4 (lower is better)
Translates to: HIPPSKFLNQKHLRFETGAIYPL*PQHPPR
Trigger: TCTTGGGGGATGCTGTGGGCAGAGGGGATAAATTGC...ACCTGTTTCAAAACGCAGGTGTTTCTGGTTTAGAAACTTGGAAGGCGGAATGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp ACGGTTCTATCTCAGGAGAAGTCATCCAGTCCTTATGGTATTAAGACAAGAGGAGCAGAACCAAGGCACTaGCCTAGACGCTTTCCATGG +
Preference number: 4 (lower is better)
Translates to: TVLSQEKSSSPYGIKTRGAEPRH*PRRFPW
Trigger: CCATGGAAAGCGTCTAGGGCAGTGCCTTGGTTCTGC...TCCTCTTGTCTTAATACCATAAGGACTGGATGACTTCTCCTGAGATAGAACCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp TTGAACCAAACGGTTCTATCTCAGGAGAAGTCATCCAGTCCTTATGGTATTAAGTCTGCGTCGATGATCTaGTGGGTGTGGAGTGGGTCC +
Preference number: 4 (lower is better)
Translates to: LNQTVLSQEKSSSPYGIKSASMI*WVWSGS
Trigger: GGACCCACTCCACACCCAGCAGATCATCGACGCAGA...CTTAATACCATAAGGACTGGATGACTTCTCCTGAGATAGAACCGTTTGGTTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp AGTCCCTCATTGAACCAAACGGTTCTATCTCAGGAGAAGTCATCCAGTCCTTATACGCTTTCCATGGAGTaGTGCCAGTTGCTTGGCACA +
Preference number: 4 (lower is better)
Translates to: SPSLNQTVLSQEKSSSPYTLSME*CQLLGT
Trigger: TGTGCCAAGCAACTGGCACCACTCCATGGAAAGCGT...ATAAGGACTGGATGACTTCTCCTGAGATAGAACCGTTTGGTTCAATGAGGGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR GCA 90 bp CACATTCCGCCTTCCAAGTTTCTAAACCAGAAACACCTGCGTTTTGAAACAGGTCCTACCAATGGTCACTaGTATTCCCACAGCAATGGT +
Preference number: 4 (lower is better)
Translates to: HIPPSKFLNQKHLRFETGPTNGH*YSHSNG
Trigger: ACCATTGCTGTGGGAATAGCAGTGACCATTGGTAGG...ACCTGTTTCAAAACGCAGGTGTTTCTGGTTTAGAAACTTGGAAGGCGGAATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp ACGGTTCTATCTCAGGAGAAGTCATCCAGTCCTTATGGTATTAAGACAAGAGGACCACTGCACTTAACTTaGCAACAGAGCAAGACCCTG +
Preference number: 4 (lower is better)
Translates to: TVLSQEKSSSPYGIKTRGPLHLT*QQSKTL
Trigger: CAGGGTCTTGCTCTGTTGCCAAGTTAAGTGCAGTGG...TCCTCTTGTCTTAATACCATAAGGACTGGATGACTTCTCCTGAGATAGAACCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CCA 90 bp TTGAACCAAACGGTTCTATCTCAGGAGAAGTCATCCAGTCCTTATGGTATTAAGTCCCTTGTAGTCACTTaGTGTCATAACAAGGAGGGC +
Preference number: 4 (lower is better)
Translates to: LNQTVLSQEKSSSPYGIKSLVVT*CHNKEG
Trigger: GCCCTCCTTGTTATGACACCAAGTGACTACAAGGGA...CTTAATACCATAAGGACTGGATGACTTCTCCTGAGATAGAACCGTTTGGTTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CAA 90 bp AGCGCCAGGCAGAGGCACCCTGCGCTCTCGGGGCGGAGCCCCATGGCGGCGTGTGCCCGGCCAATGACCTaGCCTAGGCAGGAAGTCCCC +
Preference number: 5 (lower is better)
Translates to: SARQRHPALSGRSPMAACARPMT*PRQEVP
Trigger: GGGGACTTCCTGCCTAGGCAAGGTCATTGGCCGGGC...ACACGCCGCCATGGGGCTCCGCCCCGAGAGCGCAGGGTGCCTCTGCCTGGCGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS CCA 90 bp CGCACATCCGCAGCCAGCAGCACCGCATCCAAGCACTTCCATCCCTaGGACGTTCCTTCCCGGAGCTGCCCTCGCCCCGCCCGGCTCGGC +
Preference number: 5 (lower is better)
Translates to: RTSAASSTASKHFHP*DVPSRSCPRPARLG
Trigger: GCCGAGCCGGGCGGGGCGAGGGCAGCTCCGGGAAGGAACGTCCCAGGGATGGAAGTGCTTGGATGCGGTGCTGCTGGCTGCGGATGTGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000488996.1
ENST00000495936.7
CDS-3UTR CAA 90 bp CCCAGGACTGATGGGCAGGTCCCGCTGGAGCCTCTTCACCGTGTCCCCGACCCAGATGTCCACGCCCCCTaGCCGGGGCAGCCTGGGAGG +
Preference number: 5 (lower is better)
Translates to: PRTDGQVPLEPLHRVPDPDVHAP*PGQPGR
Trigger: CCTCCCAGGCTGCCCCGGCAAGGGGGCGTGGACATC...TGGGTCGGGGACACGGTGAAGAGGCTCCAGCGGGACCTGCCCATCAGTCCTGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CAA 90 bp AGCGCCAGGCAGAGGCACCCTGCGCTCTCGGGGCGGAGCCCCATGGCGGCGTGTCTGGTCTCGAACTCCTaGGCTCAAGCGATCCGCCCA +
Preference number: 5 (lower is better)
Translates to: SARQRHPALSGRSPMAACLVSNS*AQAIRP
Trigger: TGGGCGGATCGCTTGAGCCAAGGAGTTCGAGACCAG...ACACGCCGCCATGGGGCTCCGCCCCGAGAGCGCAGGGTGCCTCTGCCTGGCGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CAA 90 bp CTGGTGCTGCGGCGTGCATGTGCGGCCCGAGAGCGTGGCTTCGGGTCTACCAGACAGCCTGACTCATGCTaGACACCCCCACGCCCAGGG +
Preference number: 5 (lower is better)
Translates to: LVLRRACAARERGFGSTRQPDSC*TPPRPG
Trigger: CCCTGGGCGTGGGGGTGTCAAGCATGAGTCAGGCTG...TCTGGTAGACCCGAAGCCACGCTCTCGGGCCGCACATGCACGCCGCAGCACCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS GCA 90 bp CGGAGAGGAGGGCGGAGGTCCTGCTGGAGGCCTTCAGCTTGGCCCTaGTCAGGTAGAGCTTCCGCCACGACAGGGCCTGTACCGAGTGGT +
Preference number: 5 (lower is better)
Translates to: RRGGRRSCWRPSAWP*SGRASATTGPVPSG
Trigger: ACCACTCGGTACAGGCCCTGTCGTGGCGGAAGCTCTACCTGAGCAGGGCCAAGCTGAAGGCCTCCAGCAGGACCTCCGCCCTCCTCTCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356387.6
ENST00000403646.8
ENST00000473939.2
ENST00000478730.7
ENST00000495936.7
ENST00000498661.6
ENST00000611770.5
CDS-3UTR CAA 90 bp AGCGCCAGGCAGAGGCACCCTGCGCTCTCGGGGCGGAGCCCCATGGCGGCGTGTGGGAAAGGTGTTTGGTaGTACAAGCAGCTCAGGGCA +
Preference number: 5 (lower is better)
Translates to: SARQRHPALSGRSPMAACGKGVW*YKQLRA
Trigger: TGCCCTGAGCTGCTTGTACAACCAAACACCTTTCCC...ACACGCCGCCATGGGGCTCCGCCCCGAGAGCGCAGGGTGCCTCTGCCTGGCGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS CCA 90 bp TCGGCCCCTCACAAGACCTGCAGGCTGCGCTCATGCCCGTCCAGCTaGACCTTGAGCTTGTGGAGCTCCTCGATCTCGCGGTTGTGGCGC +
Preference number: 5 (lower is better)
Translates to: SAPHKTCRLRSCPSS*TLSLWSSSISRLWR
Trigger: GCGCCACAACCGCGAGATCGAGGAGCTCCACAAGCTCAAGGTCCAGCTGGACGGGCATGAGCGCAGCCTGCAGGTCTTGTGAGGGGCCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356387.6
ENST00000403646.8
ENST00000473939.2
ENST00000478730.7
ENST00000495936.7
ENST00000498661.6
ENST00000611770.5
CDS CCA 90 bp CAGCACCGCATCCAAGCACTTCCATCCCTGGGACGTTCCTTCCCTTaGGGAGAATTCAGAGAAACGCGGAGCTGCCCTCGCCCCGCCCGG +
Preference number: 5 (lower is better)
Translates to: QHRIQALPSLGRSFP*GEFRETRSCPRPAR
Trigger: CCGGGCGGGGCGAGGGCAGCTCCGCGTTTCTCTGAATTCTCCCCAAGGGAAGGAACGTCCCAGGGATGGAAGTGCTTGGATGCGGTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS CCA 90 bp ACCTGCAGGCTGCGCTCATGCCCGTCCAGCTGGACCTTGAGCTTGTaGAGCTCCTCGATCTCGCGGTTGTGGCGCTCCGTTTTGTGGCGC +
Preference number: 5 (lower is better)
Translates to: TCRLRSCPSSWTLSL*SSSISRLWRSVLWR
Trigger: GCGCCACAAAACGGAGCGCCACAACCGCGAGATCGAGGAGCTCCACAAGCTCAAGGTCCAGCTGGACGGGCATGAGCGCAGCCTGCAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356387.6
ENST00000403646.8
ENST00000473939.2
ENST00000478730.7
ENST00000488996.1
ENST00000495936.7
ENST00000498661.6
ENST00000611770.5
CDS-3UTR CAA 90 bp CTGGCCAGTGACCAGCGACAGGAGGCCAGAGGGCGCTCCAGGAGTTTTTCAGGCCTCCATCCCATCTCCTaGCGCACATCCGCAGCCAGC +
Preference number: 5 (lower is better)
Translates to: LASDQRQEARGRSRSFSGLHPIS*RTSAAS
Trigger: GCTGGCTGCGGATGTGCGCAAGGAGATGGGATGGAG...GCCTGAAAAACTCCTGGAGCGCCCTCTGGCCTCCTGTCGCTGGTCACTGGCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CAA 90 bp GCCCTGGCGTGCACCTGCACCCACTCAAACGCCGAAGCCTTCGTGTCATCACTGTTGTGGCGCTCCGTTTaGTGGCGCACCAGGGAGCGG +
Preference number: 5 (lower is better)
Translates to: ALACTCTHSNAEAFVSSLLWRSV*WRTRER
Trigger: CCGCTCCCTGGTGCGCCACAAAACGGAGCGCCACAA...CAGTGATGACACGAAGGCTTCGGCGTTTGAGTGGGTGCAGGTGCACGCCAGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CAA 90 bp CACCGTGTCCCCGACCCAGGAAACCCCGAGGCCAAGGAACCAGCCTGGCTTTGCAGGTGGGAGGATTGCTaGAGGCCAGCCTGGGCAACA +
Preference number: 5 (lower is better)
Translates to: HRVPDPGNPEAKEPAWLCRWEDC*RPAWAT
Trigger: TGTTGCCCAGGCTGGCCTCAAGCAATCCTCCCACCT...GCAAAGCCAGGCTGGTTCCTTGGCCTCGGGGTTTCCTGGGTCGGGGACACGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CAA 90 bp AAGACCCACGGCGACACCTTACCCAACCAGGATGGGGCTGGAGAAGGCCACGCCGGAACCAGCCTGGCTTaGCCCCCAACGCTCTTAGCA +
Preference number: 5 (lower is better)
Translates to: KTHGDTLPNQDGAGEGHAGTSLA*PPTLLA
Trigger: TGCTAAGAGCGTTGGGGGCAAAGCCAGGCTGGTTCC...GGCGTGGCCTTCTCCAGCCCCATCCTGGTTGGGTAAGGTGTCGCCGTGGGTCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CAA 90 bp CTGGTGCTGCGGCGTGCATGTGCGGCCCGAGAGCGTGGCTTCGGGTCTACCAGAGGGCTGCCCCTTCTTTaGTTTCTGGAAAGAGAGGGC +
Preference number: 5 (lower is better)
Translates to: LVLRRACAARERGFGSTRGLPLL*FLEREG
Trigger: GCCCTCTCTTTCCAGAAACAAAAGAAGGGGCAGCCC...TCTGGTAGACCCGAAGCCACGCTCTCGGGCCGCACATGCACGCCGCAGCACCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CAA 90 bp AAGACCCACGGCGACACCTTACCCAACCAGGATGGGGCTGGAGAAGGCCACGCCAGTCTTTCTCGAGGCTaGTGGGCTTGCTGGCCTGGG +
Preference number: 5 (lower is better)
Translates to: KTHGDTLPNQDGAGEGHASLSRG*WACWPG
Trigger: CCCAGGCCAGCAAGCCCACAAGCCTCGAGAAAGACT...GGCGTGGCCTTCTCCAGCCCCATCCTGGTTGGGTAAGGTGTCGCCGTGGGTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CAA 90 bp CACTCAGCACCCATGAAGTCCACCACGGGTCTCTGGGGCAATCCTTCTCTGAACGCTCCTGTGTGGGCCTaGCCCTCCTGGGCCCCACCA +
Preference number: 5 (lower is better)
Translates to: HSAPMKSTTGLWGNPSLNAPVWA*PSWAPP
Trigger: TGGTGGGGCCCAGGAGGGCAAGGCCCACACAGGAGC...GTTCAGAGAAGGATTGCCCCAGAGACCCGTGGTGGACTTCATGGGTGCTGAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CAA 90 bp AGAGACCCCAGCCAGGCCACCCAGAATTCCACGGCACGGCCAACCCGGACCCCGGGTGTGAGCTACAGGTaGGCAGGTTCTACATGGGTT +
Preference number: 5 (lower is better)
Translates to: RDPSQATQNSTARPTRTPGVSYR*AGSTWV
Trigger: AACCCATGTAGAACCTGCCAACCTGTAGCTCACACC...CGGGGTCCGGGTTGGCCGTGCCGTGGAATTCTGGGTGGCCTGGCTGGGGTCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CAA 90 bp GGCACAGTCACTGTGTGTGGTGGGACCCAGTGTCGGCTGAGAGGCCTGGAGGGGGATGCACATAGAGACTaGGAGGGGAGAGGCCTCGTG +
Preference number: 5 (lower is better)
Translates to: GTVTVCGGTQCRLRGLEGDAHRD*EGRGLV
Trigger: CACGAGGCCTCTCCCCTCCAAGTCTCTATGTGCATC...CCCCTCCAGGCCTCTCAGCCGACACTGGGTCCCACCACACACAGTGACTGTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CAA 90 bp GGCACAGTCACTGTGTGTGGTGGGACCCAGTGTCGGCTGAGAGGCCTGGAGGGGCCCTGGTCAACTCACTaGGAGCAAGAGCACAGAGCC +
Preference number: 5 (lower is better)
Translates to: GTVTVCGGTQCRLRGLEGPWSTH*EQEHRA
Trigger: GGCTCTGTGCTCTTGCTCCAAGTGAGTTGACCAGGG...CCCCTCCAGGCCTCTCAGCCGACACTGGGTCCCACCACACACAGTGACTGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS TCA 90 bp CTCACAAGACCTGCAGGCTGCGCTCATGCCCGTCCAGCTGGACCTTaGGCTTGTGGAGCTCCTCGATCTCGCGGTTGTGGCGCTCCGTTT +
Preference number: 5 (lower is better)
Translates to: LTRPAGCAHARPAGP*ACGAPRSRGCGAPF
Trigger: AAACGGAGCGCCACAACCGCGAGATCGAGGAGCTCCACAAGCTCAAGGTCCAGCTGGACGGGCATGAGCGCAGCCTGCAGGTCTTGTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356387.6
ENST00000403646.8
ENST00000473939.2
ENST00000478730.7
ENST00000495936.7
ENST00000498661.6
ENST00000611770.5
CDS-3UTR CAA 90 bp AGGGCTAGACTTGGATGTGGCTCCGTCCCCACCCATGTGCCACCATCACTGGGCAGCTGGACCTTGAGCTaGTGGAGCTCCTCGATCTCG +
Preference number: 5 (lower is better)
Translates to: RARLGCGSVPTHVPPSLGSWTLS*WSSSIS
Trigger: CGAGATCGAGGAGCTCCACAAGCTCAAGGTCCAGCT...GCCCAGTGATGGTGGCACATGGGTGGGGACGGAGCCACATCCAAGTCTAGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CAA 90 bp AGGGCTAGACTTGGATGTGGCTCCGTCCCCACCCATGTGCCACCATCACTGGGCTGCAGTGGCACCATCTaGGCTCACTGCTACCTCTGC +
Preference number: 5 (lower is better)
Translates to: RARLGCGSVPTHVPPSLGCSGTI*AHCYLC
Trigger: GCAGAGGTAGCAGTGAGCCAAGATGGTGCCACTGCA...GCCCAGTGATGGTGGCACATGGGTGGGGACGGAGCCACATCCAAGTCTAGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CAA 90 bp GCTACAGGTTGGCAGGTTCTACATGGGTTTCGGCTCCTGTGTGGGCCTTGCCCTGCCGTGGGGAGCCGTTaGTTTAGGAGAGCCAGCCTG +
Preference number: 5 (lower is better)
Translates to: ATGWQVLHGFRLLCGPCPAVGSR*FRRASL
Trigger: CAGGCTGGCTCTCCTAAACAAACGGCTCCCCACGGC...AGGGCAAGGCCCACACAGGAGCCGAAACCCATGTAGAACCTGCCAACCTGTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CAA 90 bp GGCACAGTCACTGTGTGTGGTGGGACCCAGTGTCGGCTGAGAGGCCTGGAGGGGAGGCAAGATAATTGCTaGAACCTGGGAGGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: GTVTVCGGTQCRLRGLEGRQDNC*NLGGGG
Trigger: ACCTCCGCCTCCCAGGTTCAAGCAATTATCTTGCCT...CCCCTCCAGGCCTCTCAGCCGACACTGGGTCCCACCACACACAGTGACTGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CAA 90 bp GGCCCCACCAGGGCTCTGCAGCATCTGAGGCAAAAAGTCTTGGGCCGGACGAGGATGGAGTGGTGCCAGTaGCTTGGCACACCTGATTCC +
Preference number: 5 (lower is better)
Translates to: GPTRALQHLRQKVLGRTRMEWCQ*LGTPDS
Trigger: GGAATCAGGTGTGCCAAGCAACTGGCACCACTCCAT...CCTCGTCCGGCCCAAGACTTTTTGCCTCAGATGCTGCAGAGCCCTGGTGGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS CCA 90 bp CGCACATCCGCAGCCAGCAGCACCGCATCCAAGCACTTCCATCCCTaGGACGTTCCTTCCCTTGGGGAGAATTCAGAGAAACGCGGAGCT +
Preference number: 5 (lower is better)
Translates to: RTSAASSTASKHFHP*DVPSLGENSEKRGA
Trigger: AGCTCCGCGTTTCTCTGAATTCTCCCCAAGGGAAGGAACGTCCCAGGGATGGAAGTGCTTGGATGCGGTGCTGCTGGCTGCGGATGTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CAA 90 bp CTTAACTTCGGCTCCCTGGTCAACTCACTTGGAGCAAGAGCACAGAGCCCGGCTTACGGGCGCGAGCCATaGCACCCGGCCTGGCTAATT +
Preference number: 5 (lower is better)
Translates to: LNFGSLVNSLGARAQSPAYGREP*HPAWLI
Trigger: AATTAGCCAGGCCGGGTGCAATGGCTCGCGCCCGTA...AGCCGGGCTCTGTGCTCTTGCTCCAAGTGAGTTGACCAGGGAGCCGAAGTTAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CAA 90 bp GATTGGCAGAACCAAGGCACTGCCCTAGACGCTTTCCATGGAGTGGTGCCAGTTCACGTGGGAGGGGCCTaGGCATGTCTAGGCACCAGG +
Preference number: 5 (lower is better)
Translates to: DWQNQGTALDAFHGVVPVHVGGA*ACLGTR
Trigger: CCTGGTGCCTAGACATGCCAAGGCCCCTCCCACGTG...AACTGGCACCACTCCATGGAAAGCGTCTAGGGCAGTGCCTTGGTTCTGCCAATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CAA 90 bp ACAGTCACTGTGTGTGGTGGGACCCAGTGTCGGCTGAGAGGCCTGGAGGGGTCTCCCACTCTCATGCTCTaGGAGCTTCAAGCAAGGGGA +
Preference number: 5 (lower is better)
Translates to: TVTVCGGTQCRLRGLEGSPTLML*ELQARG
Trigger: TCCCCTTGCTTGAAGCTCCAAGAGCATGAGAGTGGG...AGACCCCTCCAGGCCTCTCAGCCGACACTGGGTCCCACCACACACAGTGACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CAA 90 bp GAGTCACTGCGCCCGGCCCCAGTGACTATTTATGAGAACAAAAGACAAGGCATGAAGGAGGGCACTCATTaGGCCTGGGCCGGCCCCTGG +
Preference number: 5 (lower is better)
Translates to: ESLRPAPVTIYENKRQGMKEGTH*AWAGPW
Trigger: CCAGGGGCCGGCCCAGGCCAAATGAGTGCCCTCCTT...CATGCCTTGTCTTTTGTTCTCATAAATAGTCACTGGGGCCGGGCGCAGTGACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS CCA 90 bp CGCACATCCGCAGCCAGCAGCACCGCATCCAAGCACTTCCATCCCTaGGACGTTCCTTCCCTTGGGGAGAATTCAGAGAAACGCTGCAAT +
Preference number: 5 (lower is better)
Translates to: RTSAASSTASKHFHP*DVPSLGENSEKRCN
Trigger: ATTGCAGCGTTTCTCTGAATTCTCCCCAAGGGAAGGAACGTCCCAGGGATGGAAGTGCTTGGATGCGGTGCTGCTGGCTGCGGATGTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498661.6
CDS-3UTR CAA 90 bp AGCGTGGCTTCGGGTCTACCAGATGCCTTCAAGGAAAAGGCCAGAACCTGCACTTCCTCGATCTCGCGGTaGTGGCGCTCCGTTTTGTGG +
Preference number: 5 (lower is better)
Translates to: SVASGLPDAFKEKARTCTSSISR*WRSVLW
Trigger: CCACAAAACGGAGCGCCACAACCGCGAGATCGAGGA...AGTGCAGGTTCTGGCCTTTTCCTTGAAGGCATCTGGTAGACCCGAAGCCACGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CAA 90 bp AGCCGCTTCAGAAAGATGTTCAGGAAACACCGTTGCCTGTTTGCTCAGAGTGGCCCAGGCTGCCCACCATaGGAAACATCCCCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: SRFRKMFRKHRCLFAQSGPGCPP*ETSPRA
Trigger: GGCCCTGGGGGATGTTTCCAATGGTGGGCAGCCTGG...GCCACTCTGAGCAAACAGGCAACGGTGTTTCCTGAACATCTTTCTGAAGCGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CAA 90 bp GAGTCACTGCGCCCGGCCCCAGTGACTATTTATGAGAACAAAAGACAAGGCATGTTGCCCAGGCTGGTCTaGCACCCCTGGGCCCAAGTG +
Preference number: 5 (lower is better)
Translates to: ESLRPAPVTIYENKRQGMLPRLV*HPWAQV
Trigger: CACTTGGGCCCAGGGGTGCAAGACCAGCCTGGGCAA...CATGCCTTGTCTTTTGTTCTCATAAATAGTCACTGGGGCCGGGCGCAGTGACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CAA 90 bp CACTCAGCACCCATGAAGTCCACCACGGGTCTCTGGGGCAATCCTTCTCTGAACGAGGCACAAGATCGCTaGAACCTGGGAGGAGGAGGT +
Preference number: 5 (lower is better)
Translates to: HSAPMKSTTGLWGNPSLNEAQDR*NLGGGG
Trigger: ACCTCCTCCTCCCAGGTTCAAGCGATCTTGTGCCTC...GTTCAGAGAAGGATTGCCCCAGAGACCCGTGGTGGACTTCATGGGTGCTGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CAA 90 bp GTCCTTCCATGCTGGCCCTTCCAGCACTCCTGCAGAGCACACTTTAGGAAACTCAGGCCAGCGGATCACTaGAGGCCAGGAGTTCGAAAC +
Preference number: 5 (lower is better)
Translates to: VLPCWPFQHSCRAHFRKLRPADH*RPGVRN
Trigger: GTTTCGAACTCCTGGCCTCAAGTGATCCGCTGGCCT...GAGTTTCCTAAAGTGTGCTCTGCAGGAGTGCTGGAAGGGCCAGCATGGAAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CAA 90 bp AGGGCAGCTGTTTTAAAAACCCGCACACAGGACAGTGGCTGTCTCTGCCGCACGAACACCGTTGCCTGTTaGCTCAGAGTGGCAGGTGGT +
Preference number: 5 (lower is better)
Translates to: RAAVLKTRTQDSGCLCRTNTVAC*LRVAGG
Trigger: ACCACCTGCCACTCTGAGCAAACAGGCAACGGTGTT...CGTGCGGCAGAGACAGCCACTGTCCTGTGTGCGGGTTTTTAAAACAGCTGCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS GCA 90 bp GGTCATTTATACGAATGCCAACTCAGGCTCTCCATCCCATCTCCTTaGGCACATCCGCAGCCAGCAGCACCGCATCCAAGCACTTCCATC +
Preference number: 5 (lower is better)
Translates to: GHLYECQLRLSIPSP*AHPQPAAPHPSTSI
Trigger: GATGGAAGTGCTTGGATGCGGTGCTGCTGGCTGCGGATGTGCGCAAGGAGATGGGATGGAGAGCCTGAGTTGGCATTCGTATAAATGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000478730.7
ENST00000482237.5
ENST00000488996.1
ENST00000495936.7
ENST00000498661.6
CDS-3UTR CAA 90 bp AGCGTGGCTTCGGGTCTACCAGATGCCTTCAAGGAAAAGGCCAGAACCTGCACTAGTGGTGCCAGTTGCTaGGCACACCTGATTCCTAGC +
Preference number: 5 (lower is better)
Translates to: SVASGLPDAFKEKARTCTSGASC*AHLIPS
Trigger: GCTAGGAATCAGGTGTGCCAAGCAACTGGCACCACT...AGTGCAGGTTCTGGCCTTTTCCTTGAAGGCATCTGGTAGACCCGAAGCCACGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CAA 90 bp AGGTTTCCTCTCCCGGCCACCATGGCCCTACCAATGGTCACTGCTATTCCCACAGTTCAGGAAACACCGTaGCCTGTTTGCTCAGAGTGG +
Preference number: 5 (lower is better)
Translates to: RFPLPATMALPMVTAIPTVQETP*PVCSEW
Trigger: CCACTCTGAGCAAACAGGCAACGGTGTTTCCTGAAC...TGTGGGAATAGCAGTGACCATTGGTAGGGCCATGGTGGCCGGGAGAGGAAACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CAA 90 bp AAAGACAAGGCATGGCTGACTCTCCAGGTTACAGCTGGAGAAGAGGGGAAAGGTAGGCAGGAGGGTCGCTaGAGGCCAGAAGTTCAAGAC +
Preference number: 5 (lower is better)
Translates to: KDKAWLTLQVTAGEEGKGRQEGR*RPEVQD
Trigger: GTCTTGAACTTCTGGCCTCAAGCGACCCTCCTGCCT...ACCTTTCCCCTCTTCTCCAGCTGTAACCTGGAGAGTCAGCCATGCCTTGTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CAA 90 bp GCACCCATGAAGTCCACCACGGGTCTCTGGGGCAATCCTTCTCTGAACGCAAAATTCAATGCCAGTGACTaGTGTCCTGCCCTTGACAGG +
Preference number: 5 (lower is better)
Translates to: APMKSTTGLWGNPSLNAKFNASD*CPALDR
Trigger: CCTGTCAAGGGCAGGACACAAGTCACTGGCATTGAA...TTTTGCGTTCAGAGAAGGATTGCCCCAGAGACCCGTGGTGGACTTCATGGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CAA 90 bp ATGAAGTCCACCACGGGTCTCTGGGGCAATCCTTCTCTGAACGCAAAACCCTGCAGAGGGGAAAGGTGTTaGGTTGTACAAGCAGCTCAG +
Preference number: 5 (lower is better)
Translates to: MKSTTGLWGNPSLNAKPCRGERC*VVQAAQ
Trigger: CTGAGCTGCTTGTACAACCAAACACCTTTCCCCTCT...GCAGGGTTTTGCGTTCAGAGAAGGATTGCCCCAGAGACCCGTGGTGGACTTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CAA 90 bp GCACCCATGAAGTCCACCACGGGTCTCTGGGGCAATCCTTCTCTGAACGCAAAACTCGCCTGGCCGATGTaGATATTCTTTAGCAAAGCG +
Preference number: 5 (lower is better)
Translates to: APMKSTTGLWGNPSLNAKLAWPM*IFFSKA
Trigger: CGCTTTGCTAAAGAATATCAACATCGGCCAGGCGAG...TTTTGCGTTCAGAGAAGGATTGCCCCAGAGACCCGTGGTGGACTTCATGGGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CAA 90 bp GATTGGCAGAACCAAGGCACTGCCCTAGACGCTTTCCATGGAGTGGTGCCAGTTAGCTTGGCAGAAGAATaGCTTGAACCTGGGAAGTGG +
Preference number: 5 (lower is better)
Translates to: DWQNQGTALDAFHGVVPVSLAEE*LEPGKW
Trigger: CCACTTCCCAGGTTCAAGCAATTCTTCTGCCAAGCT...AACTGGCACCACTCCATGGAAAGCGTCTAGGGCAGTGCCTTGGTTCTGCCAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CAA 90 bp TCAGGCTTACGTGGTCTGGTCCTCAGCAGACCCTTCCTAGAAGACACGAAAACAAGGAAAACTTTGGTCTaGAACTACCCGGCAGCCTTG +
Preference number: 5 (lower is better)
Translates to: SGLRGLVLSRPFLEDTKTRKTLV*NYPAAL
Trigger: CAAGGCTGCCGGGTAGTTCAAGACCAAAGTTTTCCT...TGTTTTCGTGTCTTCTAGGAAGGGTCTGCTGAGGACCAGACCACGTAAGCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CAA 90 bp GCACCCATGAAGTCCACCACGGGTCTCTGGGGCAATCCTTCTCTGAACGCAAAACTGGGAAAAGAGAATTaGAGCCTAGCGTACTTTGCA +
Preference number: 5 (lower is better)
Translates to: APMKSTTGLWGNPSLNAKLGKEN*SLAYFA
Trigger: TGCAAAGTACGCTAGGCTCAAATTCTCTTTTCCCAG...TTTTGCGTTCAGAGAAGGATTGCCCCAGAGACCCGTGGTGGACTTCATGGGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CAA 90 bp GTCCTTATGGTATTAAGACAAGAGGAAAACTTTGGTCTTGAACTACCCGGCAGCATCAGAGGGCTAGACTaGGATGTGGCTCCGTCCCCA +
Preference number: 5 (lower is better)
Translates to: VLMVLRQEENFGLELPGSIRGLD*DVAPSP
Trigger: TGGGGACGGAGCCACATCCAAGTCTAGCCCTCTGAT...GCTGCCGGGTAGTTCAAGACCAAAGTTTTCCTCTTGTCTTAATACCATAAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CAA 90 bp AGCCGCTTCAGAAAGATGTTCAGGAAACACCGTTGCCTGTTTGCTCAGAGTGGCAGAAACACCTGCGTTTaGAAACAGGTGGTCAGGTAC +
Preference number: 5 (lower is better)
Translates to: SRFRKMFRKHRCLFAQSGRNTCV*KQVVRY
Trigger: GTACCTGACCACCTGTTTCAAAACGCAGGTGTTTCT...GCCACTCTGAGCAAACAGGCAACGGTGTTTCCTGAACATCTTTCTGAAGCGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CAA 90 bp ACGGTTCTATCTCAGGAGAAGTCATCCAGTCCTTATGGTATTAAGACAAGAGGAACTTGTGTCCTGCCCTaGACAGGGGTGGGGCAGATT +
Preference number: 5 (lower is better)
Translates to: TVLSQEKSSSPYGIKTRGTCVLP*TGVGQI
Trigger: AATCTGCCCCACCCCTGTCAAGGGCAGGACACAAGT...TCCTCTTGTCTTAATACCATAAGGACTGGATGACTTCTCCTGAGATAGAACCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CAA 90 bp GTCCTTATGGTATTAAGACAAGAGGAAAACTTTGGTCTTGAACTACCCGGCAGCTCTGCTTACCGGTGTTaGGGGTGGCCATTTCCGCAT +
Preference number: 5 (lower is better)
Translates to: VLMVLRQEENFGLELPGSSAYRC*GWPFPH
Trigger: ATGCGGAAATGGCCACCCCAAACACCGGTAAGCAGA...GCTGCCGGGTAGTTCAAGACCAAAGTTTTCCTCTTGTCTTAATACCATAAGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CAA 90 bp TTGAACCAAACGGTTCTATCTCAGGAGAAGTCATCCAGTCCTTATGGTATTAAGCCTGGCTTCTCAGGATaGGCAGAACCAAGGCACTGC +
Preference number: 5 (lower is better)
Translates to: LNQTVLSQEKSSSPYGIKPGFSG*AEPRHC
Trigger: GCAGTGCCTTGGTTCTGCCAATCCTGAGAAGCCAGG...CTTAATACCATAAGGACTGGATGACTTCTCCTGAGATAGAACCGTTTGGTTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS-3UTR CAA 90 bp ACGGTTCTATCTCAGGAGAAGTCATCCAGTCCTTATGGTATTAAGACAAGAGGATTTGTGATACCAGAGTaGGGTCTGTCCTTGAAGCTG +
Preference number: 5 (lower is better)
Translates to: TVLSQEKSSSPYGIKTRGFVIPE*GLSLKL
Trigger: CAGCTTCAAGGACAGACCCAACTCTGGTATCACAAA...TCCTCTTGTCTTAATACCATAAGGACTGGATGACTTCTCCTGAGATAGAACCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS CCA 72 bp GCAGCCAGCAGCACCGCATCCAAGCACTTCCATCCCTaGGACGTTCCTTCCCGGAGCTGCCCTCGCCCCGCC +
Preference number: 6 (lower is better)
Translates to: AASSTASKHFHP*DVPSRSCPRPA
Trigger: GGCGGGGCGAGGGCAGCTCCGGGAAGGAACGTCCCAGGGATGGAAGTGCTTGGATGCGGTGCTGCTGGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000488996.1
ENST00000495936.7
CDS GCA 72 bp CCAGGTAGCTGCGGCGGACCCAGTCCCGGTAATCCATaGCCTTATGGCCGGGCTCAGGGCAGGCAGGAGCAG +
Preference number: 6 (lower is better)
Translates to: PGSCGGPSPGNP*PYGRAQGRQEQ
Trigger: CTGCTCCTGCCTGCCCTGAGCCCGGCCATAAGGGCATGGATTACCGGGACTGGGTCCGCCGCAGCTACCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356387.6
ENST00000403646.8
ENST00000473939.2
ENST00000478730.7
ENST00000495936.7
ENST00000498661.6
ENST00000611770.5
CDS TCA 72 bp CCTGCAGGCTGCGCTCATGCCCGTCCAGCTGGACCTTaGGCTTGTGGAGCTCCTCGATCTCGCGGTTGTGGC +
Preference number: 6 (lower is better)
Translates to: PAGCAHARPAGP*ACGAPRSRGCG
Trigger: GCCACAACCGCGAGATCGAGGAGCTCCACAAGCTCAAGGTCCAGCTGGACGGGCATGAGCGCAGCCTGCAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356387.6
ENST00000403646.8
ENST00000473939.2
ENST00000478730.7
ENST00000488996.1
ENST00000495936.7
ENST00000498661.6
ENST00000611770.5
CDS CCA 72 bp GCAGCCAGCAGCACCGCATCCAAGCACTTCCATCCCTaGGACGTTCCTTCCCTGGAACCACCCCGGGATCGC +
Preference number: 6 (lower is better)
Translates to: AASSTASKHFHP*DVPSLEPPRDR
Trigger: GCGATCCCGGGGTGGTTCCAGGGAAGGAACGTCCCAGGGATGGAAGTGCTTGGATGCGGTGCTGCTGGCTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482237.5
CDS CAA 72 bp AGGCTGCGCTCATGCCCGTCCAGCTGGACCTTGAGCTaGTGGAGCTCCTCGATCTCGCGGTTGTGGCGCTCC +
Preference number: 6 (lower is better)
Translates to: RLRSCPSSWTLS*WSSSISRLWRS
Trigger: GGAGCGCCACAACCGCGAGATCGAGGAGCTCCACAAGCTCAAGGTCCAGCTGGACGGGCATGAGCGCAGCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356387.6
ENST00000403646.8
ENST00000473939.2
ENST00000478730.7
ENST00000488996.1
ENST00000495936.7
ENST00000498661.6
ENST00000611770.5
CDS CCA 72 bp CTGCGCTCATGCCCGTCCAGCTGGACCTTGAGCTTGTaGAGCTCCTCGATCTCGCGGTTGTGGCGCTCCGTT +
Preference number: 6 (lower is better)
Translates to: LRSCPSSWTLSL*SSSISRLWRSV
Trigger: AACGGAGCGCCACAACCGCGAGATCGAGGAGCTCCACAAGCTCAAGGTCCAGCTGGACGGGCATGAGCGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356387.6
ENST00000403646.8
ENST00000473939.2
ENST00000478730.7
ENST00000488996.1
ENST00000495936.7
ENST00000498661.6
ENST00000611770.5
CDS CAA 72 bp TGGACCTTGAGCTTGTGGAGCTCCTCGATCTCGCGGTaGTGGCGCTCCGTTTTGTGGCGCACCAGGGAGCGG +
Preference number: 6 (lower is better)
Translates to: WTLSLWSSSISR*WRSVLWRTRER
Trigger: CCGCTCCCTGGTGCGCCACAAAACGGAGCGCCACAACCGCGAGATCGAGGAGCTCCACAAGCTCAAGGTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356387.6
ENST00000403646.8
ENST00000473939.2
ENST00000478730.7
ENST00000488996.1
ENST00000495936.7
ENST00000498661.6
ENST00000611770.5
CDS CAA 72 bp ACCTGCAGGCTGCGCTCATGCCCGTCCAGCTGGACCTaGAGCTTGTGGAGCTCCTCGATCTCGCGGTTGTGG +
Preference number: 6 (lower is better)
Translates to: TCRLRSCPSSWT*SLWSSSISRLW
Trigger: CCACAACCGCGAGATCGAGGAGCTCCACAAGCTCAAGGTCCAGCTGGACGGGCATGAGCGCAGCCTGCAGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356387.6
ENST00000403646.8
ENST00000473939.2
ENST00000478730.7
ENST00000488996.1
ENST00000495936.7
ENST00000498661.6
ENST00000611770.5
CDS CAA 90 bp CCTCACAAGACCTGCAGGCTGCGCTCATGCCCGTCCAGCTGGACCTaGAGCTTGTGGAGCTCCTCGATCTCGCGGTTGTGGCGCTCCGTT +
Preference number: 6 (lower is better)
Translates to: PHKTCRLRSCPSSWT*SLWSSSISRLWRSV
Trigger: AACGGAGCGCCACAACCGCGAGATCGAGGAGCTCCACAAGCTCAAGGTCCAGCTGGACGGGCATGAGCGCAGCCTGCAGGTCTTGTGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356387.6
ENST00000403646.8
ENST00000473939.2
ENST00000478730.7
ENST00000495936.7
ENST00000498661.6
ENST00000611770.5
CDS CAA 90 bp AAGACCTGCAGGCTGCGCTCATGCCCGTCCAGCTGGACCTTGAGCTaGTGGAGCTCCTCGATCTCGCGGTTGTGGCGCTCCGTTTTGTGG +
Preference number: 6 (lower is better)
Translates to: KTCRLRSCPSSWTLS*WSSSISRLWRSVLW
Trigger: CCACAAAACGGAGCGCCACAACCGCGAGATCGAGGAGCTCCACAAGCTCAAGGTCCAGCTGGACGGGCATGAGCGCAGCCTGCAGGTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356387.6
ENST00000403646.8
ENST00000473939.2
ENST00000478730.7
ENST00000488996.1
ENST00000495936.7
ENST00000498661.6
ENST00000611770.5
CDS CCA 72 bp ATCCAAGCACTTCCATCCCTGGGACGTTCCTTCCCTTaGGGAGAATTCAGAGAAACGCGGAGCTGCCCTCGC +
Preference number: 6 (lower is better)
Translates to: IQALPSLGRSFP*GEFRETRSCPR
Trigger: GCGAGGGCAGCTCCGCGTTTCTCTGAATTCTCCCCAAGGGAAGGAACGTCCCAGGGATGGAAGTGCTTGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356387.6
CDS CAA 72 bp ATACGAATGCCAACTCAGGCTCTCCATCCCATCTCCTaGCGCACATCCGCAGCCAGCAGCACCGCATCCAAG +
Preference number: 6 (lower is better)
Translates to: IRMPTQALHPIS*RTSAASSTASK
Trigger: CTTGGATGCGGTGCTGCTGGCTGCGGATGTGCGCAAGGAGATGGGATGGAGAGCCTGAGTTGGCATTCGTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000478730.7
ENST00000482237.5
ENST00000488996.1
ENST00000495936.7
ENST00000498661.6
CDS CCA 72 bp GCAGCCAGCAGCACCGCATCCAAGCACTTCCATCCCTaGGACGTTCCTTCCCTTGGGGAGAATTCAGAGAAA +
Preference number: 6 (lower is better)
Translates to: AASSTASKHFHP*DVPSLGENSEK
Trigger: TTTCTCTGAATTCTCCCCAAGGGAAGGAACGTCCCAGGGATGGAAGTGCTTGGATGCGGTGCTGCTGGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356387.6
ENST00000498661.6
CDS GCA 72 bp GCACCTCCACCATGGCCACCAGGTCATTTATACGAATaGCAACTCAGGCTCTCCATCCCATCTCCTTGCGCA +
Preference number: 6 (lower is better)
Translates to: APPPWPPGHLYE*QLRLSIPSPCA
Trigger: TGCGCAAGGAGATGGGATGGAGAGCCTGAGTTGGCATTCGTATAAATGACCTGGTGGCCATGGTGGAGGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488996.1
CDS CAA 90 bp AGGTCATTTATACGAATGCCAACTCAGGCTCTCCATCCCATCTCCTaGCGCACATCCGCAGCCAGCAGCACCGCATCCAAGCACTTCCAT +
Preference number: 6 (lower is better)
Translates to: RSFIRMPTQALHPIS*RTSAASSTASKHFH
Trigger: ATGGAAGTGCTTGGATGCGGTGCTGCTGGCTGCGGATGTGCGCAAGGAGATGGGATGGAGAGCCTGAGTTGGCATTCGTATAAATGACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356387.6
ENST00000478730.7
ENST00000482237.5
ENST00000488996.1
ENST00000495936.7
ENST00000498661.6
CDS GCA 72 bp ACTCATGGTGGGAGCCAGGCAGGTCATTTATACGAATaGCAACTCAGGCTCTCCATCCCATCTCCTTGCGCA +
Preference number: 6 (lower is better)
Translates to: THGGSQAGHLYE*QLRLSIPSPCA
Trigger: TGCGCAAGGAGATGGGATGGAGAGCCTGAGTTGGCATTCGTATAAATGACCTGCCTGGCTCCCACCATGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356387.6
ENST00000478730.7
ENST00000482237.5
ENST00000495936.7
ENST00000498661.6