Pregenerated sensors for OR8U3 (Homo sapiens)
Ensembl gene IDs: ENSG00000279961Ensembl transcript IDs: ENST00000623286.1
Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
---|---|---|
CDS GCA 90 bp | GGGCAACCAGGAAGCTGTATATATATGGAACTGCCACCAGTTGAATaGAGACTCTTCTTGACATCAGTGTTGAATAATGCAGGGGACTAC | + |
Preference number: 5 (lower is better) Translates to: GQPGSCIYMELPPVE*RLFLTSVLNNAGDY Trigger: GTAGTCCCCTGCATTATTCAACACTGATGTCAAGAAGAGTCTGCATTCAACTGGTGGCAGTTCCATATATATACAGCTTCCTGGTTGCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000623286.1 |
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CDS CAA 90 bp | AGAAAACAACCCAGTTGGGTTGCACAAGCATGGAAAGGAATGGTGTaGCGTTCCACAACAAAATTCACCATCATCTTCGGTGTAATAGCA | + |
Preference number: 6 (lower is better) Translates to: RKQPSWVAQAWKGMV*RSTTKFTIIFGVIA Trigger: TGCTATTACACCGAAGATGATGGTGAATTTTGTTGTGGAACGCAACACCATTCCTTTCCATGCTTGTGCAACCCAACTGGGTTGTTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000623286.1 |
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CDS GCA 72 bp | GGAAGCTGTATATATATGGAACTGCCACCAGTTGAATaGAGACTCTTCTTGACATCAGTGTTGAATAATGCA | + |
Preference number: 6 (lower is better) Translates to: GSCIYMELPPVE*RLFLTSVLNNA Trigger: TGCATTATTCAACACTGATGTCAAGAAGAGTCTGCATTCAACTGGTGGCAGTTCCATATATATACAGCTTCC 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000623286.1 |