Pregenerated sensors for OR8J1 (Homo sapiens)
Ensembl gene IDs: ENSG00000172487Ensembl transcript IDs: ENST00000533152.3
Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | TGGAAACCATTTTTATTTCAAACTGTCTACCTGCTTAATCCCAGGCAGAATTGGGACTGCCATCATATGTaGAGCACAGGTAGAAAAGGC | + |
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Preference number: 4 (lower is better) Translates to: WKPFLFQTVYLLNPRQNWDCHHM*STGRKG Trigger: GCCTTTTCTACCTGTGCTTCACATATGATGGCAGTC...CCAATTCTGCCTGGGATTAAGCAGGTAGACAGTTTGAAATAAAAATGGTTTCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000533152.3 |
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| CDS-3UTR TCA 90 bp | TGGAAACCATTTTTATTTCAAACTGTCTACCTGCTTAATCCCAGGCAGAATTGGGGGGCTGCACATACATaGATAGCAATGTCCCATAAA | + |
|
Preference number: 4 (lower is better) Translates to: WKPFLFQTVYLLNPRQNWGAAHT*IAMSHK Trigger: TTTATGGGACATTGCTATTCATGTATGTGCAGCCCC...CCAATTCTGCCTGGGATTAAGCAGGTAGACAGTTTGAAATAAAAATGGTTTCCA 41% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENST00000533152.3 |
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| CDS-3UTR GCA 90 bp | TGGAAACCATTTTTATTTCAAACTGTCTACCTGCTTAATCCCAGGCAGAATTGGTGGTTACTTCGGGGCTaGACATACATGAATAGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: WKPFLFQTVYLLNPRQNWWLLRG*TYMNSN Trigger: ATTGCTATTCATGTATGTGCAGCCCCGAAGTAACCA...CCAATTCTGCCTGGGATTAAGCAGGTAGACAGTTTGAAATAAAAATGGTTTCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000533152.3 |
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| CDS-3UTR GCA 90 bp | TGGAAACCATTTTTATTTCAAACTGTCTACCTGCTTAATCCCAGGCAGAATTGGTTCAAACTGTCTACCTaGTTAATCCCAGGCAGAATT | + |
|
Preference number: 4 (lower is better) Translates to: WKPFLFQTVYLLNPRQNWFKLST*LIPGRI Trigger: AATTCTGCCTGGGATTAAGCAGGTAGACAGTTTGAA...CCAATTCTGCCTGGGATTAAGCAGGTAGACAGTTTGAAATAAAAATGGTTTCCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000533152.3 |
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