Pregenerated sensors for OR8H2 (Homo sapiens)
Ensembl gene IDs: ENSG00000181767Ensembl transcript IDs: ENST00000313503.2, ENST00000641311.1
Found 10 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | AATAATGGCTACCCCCACATCAAGAGCAGCCAAAACTCAATATTTGTAGAGGATTACTCCTACCCACTCTaGTATAATTCTTCCCCATAT | + |
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Preference number: 2 (lower is better) Translates to: NNGYPHIKSSQNSIFVEDYSYPL*YNSSPY Trigger: ATATGGGGAAGAATTATAGCAGAGTGGGTAGGAGTA...ATCCTCTACAAATATTGAGTTTTGGCTGCTCTTGATGTGGGGGTAGCCATTATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000313503.2 ENST00000641311.1 |
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| CDS-3UTR GCA 90 bp | AATAATGGCTACCCCCACATCAAGAGCAGCCAAAACTCAATATTTGTAGAGGATCTGAGGCAGGAGAATTaGTTGAACGCGGGAGGCGGA | + |
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Preference number: 4 (lower is better) Translates to: NNGYPHIKSSQNSIFVEDLRQEN*LNAGGG Trigger: TCCGCCTCCCGCGTTCAAGCAATTCTCCTGCCTCAG...ATCCTCTACAAATATTGAGTTTTGGCTGCTCTTGATGTGGGGGTAGCCATTATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000313503.2 ENST00000641311.1 |
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| CDS-3UTR GCA 90 bp | AATAATGGCTACCCCCACATCAAGAGCAGCCAAAACTCAATATTTGTAGAGGATCAGCCCTGGCGACTGTaGCAGACTCTGATGTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: NNGYPHIKSSQNSIFVEDQPWRL*QTLMCV Trigger: CACACACATCAGAGTCTGGCACAGTCGCCAGGGCTG...ATCCTCTACAAATATTGAGTTTTGGCTGCTCTTGATGTGGGGGTAGCCATTATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000641311.1 |
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| CDS-3UTR CCA 90 bp | AATAATGGCTACCCCCACATCAAGAGCAGCCAAAACTCAATATTTGTAGAGGATATTGCATTCCAGCCCTaGCGACTGTGCCAGACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: NNGYPHIKSSQNSIFVEDIAFQP*RLCQTL Trigger: CAGAGTCTGGCACAGTCGCCAGGGCTGGAATGCAAT...ATCCTCTACAAATATTGAGTTTTGGCTGCTCTTGATGTGGGGGTAGCCATTATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000641311.1 |
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| CDS-3UTR TCA 90 bp | AATAATGGCTACCCCCACATCAAGAGCAGCCAAAACTCAATATTTGTAGAGGATGCGATCATGGGCCATTaGGGAGAGAAGGTAACATTC | + |
|
Preference number: 4 (lower is better) Translates to: NNGYPHIKSSQNSIFVEDAIMGH*GEKVTF Trigger: GAATGTTACCTTCTCTCCTCAATGGCCCATGATCGC...ATCCTCTACAAATATTGAGTTTTGGCTGCTCTTGATGTGGGGGTAGCCATTATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000313503.2 ENST00000641311.1 |
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| CDS-3UTR GCA 90 bp | AATAATGGCTACCCCCACATCAAGAGCAGCCAAAACTCAATATTTGTAGAGGATGACATTTTAGCACTCTaGCTGACTAAATTTGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: NNGYPHIKSSQNSIFVEDDILAL*LTKFVG Trigger: GCCCACAAATTTAGTCAGGCAGAGTGCTAAAATGTC...ATCCTCTACAAATATTGAGTTTTGGCTGCTCTTGATGTGGGGGTAGCCATTATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000313503.2 ENST00000641311.1 |
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| CDS GCA 90 bp | GAGAAGCTGAGGCAGGAGAATTGCTTGAACGCGGGAGGCGGAGGTTaGAGTGAGCCGGGATCGCACCATTGCATTCCAGCCCTGGCGACT | + |
|
Preference number: 5 (lower is better) Translates to: EKLRQENCLNAGGGG*SEPGSHHCIPALAT Trigger: AGTCGCCAGGGCTGGAATGCAATGGTGCGATCCCGGCTCACTGCAACCTCCGCCTCCCGCGTTCAAGCAATTCTCCTGCCTCAGCTTCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000313503.2 ENST00000641311.1 |
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| CDS CCA 90 bp | GCGGAGGTTGCAGTGAGCCGGGATCGCACCATTGCATTCCAGCCCTaGCGACTGTGCCAGACTCTGATGTGTGTGAGTCAACATTCATTA | + |
|
Preference number: 5 (lower is better) Translates to: AEVAVSRDRTIAFQP*RLCQTLMCVSQHSL Trigger: TAATGAATGTTGACTCACACACATCAGAGTCTGGCACAGTCGCCAGGGCTGGAATGCAATGGTGCGATCCCGGCTCACTGCAACCTCCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641311.1 |
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| CDS-3UTR CAA 90 bp | AATAATGGCTACCCCCACATCAAGAGCAGCCAAAACTCAATATTTGTAGAGGATAGGCAGGAGAATTGCTaGAACGCGGGAGGCGGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: NNGYPHIKSSQNSIFVEDRQENC*NAGGGG Trigger: ACCTCCGCCTCCCGCGTTCAAGCAATTCTCCTGCCT...ATCCTCTACAAATATTGAGTTTTGGCTGCTCTTGATGTGGGGGTAGCCATTATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000313503.2 ENST00000641311.1 |
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| CDS-3UTR CAA 90 bp | AATAATGGCTACCCCCACATCAAGAGCAGCCAAAACTCAATATTTGTAGAGGATGCGACTGTGCCAGACTaGTGTGTGAGTCAACATTCA | + |
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Preference number: 5 (lower is better) Translates to: NNGYPHIKSSQNSIFVEDATVPD*CVSQHS Trigger: TGAATGTTGACTCACACACAAGTCTGGCACAGTCGC...ATCCTCTACAAATATTGAGTTTTGGCTGCTCTTGATGTGGGGGTAGCCATTATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000313503.2 |
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