RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OR7D4 (Homo sapiens)

Ensembl gene IDs: ENSG00000174667

Ensembl transcript IDs: ENST00000641244.1, ENST00000641669.1

Found 214 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGGATAGGCCTGGCCTCTGTTGCTCTGTCCCTTGCTTCCCTGCACTaGCAGAACTCAGCTGGCATATGTGAGCTGCCCCATGAGAGTCCC +
Preference number: 1 (lower is better)
Translates to: RIGLASVALSLASLH*QNSAGICELPHESP
Trigger: GGGACTCTCATGGGGCAGCTCACATATGCCAGCTGAGTTCTGTCAGTGCAGGGAAGCAAGGGACAGAGCAACAGAGGCCAGGCCTATCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
3UTR GCA 90 bp AGAATACAATGGCCCGGAAATCAAGAGTTGGAACAAGATTGGCCCTaGCTAACATCACCTGTAGTGAGACACCTAAGGGGTTTGTGCTCC +
Preference number: 1 (lower is better)
Translates to: RIQWPGNQELEQDWP*LTSPVVRHLRGLCS
Trigger: GGAGCACAAACCCCTTAGGTGTCTCACTACAGGTGATGTTAGGCAGGGCCAATCTTGTTCCAACTCTTGATTTCCGGGCCATTGTATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
3UTR TCA 90 bp AAGGGCGACATGTCCATGTGCCAGTTCTACAGCATGGAATTTTTCTaGCAGTACAATGTCTTGAATGGTGAGGAACTCTACCGGAAGGCA +
Preference number: 1 (lower is better)
Translates to: KGDMSMCQFYSMEFF*QYNVLNGEELYRKA
Trigger: TGCCTTCCGGTAGAGTTCCTCACCATTCAAGACATTGTACTGTCAGAAAAATTCCATGCTGTAGAACTGGCACATGGACATGTCGCCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
3UTR TCA 90 bp GTTCTACAGCATGGAATTTTTCTGACAGTACAATGTCTTGAATGGTaGGGAACTCTACCGGAAGGCAGAGGGAAATCTCCATGGTCTTGG +
Preference number: 1 (lower is better)
Translates to: VLQHGIFLTVQCLEW*GTLPEGRGKSPWSW
Trigger: CCAAGACCATGGAGATTTCCCTCTGCCTTCCGGTAGAGTTCCTCACCATTCAAGACATTGTACTGTCAGAAAAATTCCATGCTGTAGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
3UTR TCA 90 bp TGTGCCAGTTCTACAGCATGGAATTTTTCTGACAGTACAATGTCTTaGATGGTGAGGAACTCTACCGGAAGGCAGAGGGAAATCTCCATG +
Preference number: 1 (lower is better)
Translates to: CASSTAWNFSDSTMS*MVRNSTGRQREISM
Trigger: CATGGAGATTTCCCTCTGCCTTCCGGTAGAGTTCCTCACCATTCAAGACATTGTACTGTCAGAAAAATTCCATGCTGTAGAACTGGCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
3UTR GCA 90 bp TATAAAGTTACCAAGTTAGGCTGCAAAGATCAGCAGTTTCTAACATaGCAACATAGATCAATCAGACAGAAAGAATTAGGGTCTTATCCA +
Preference number: 1 (lower is better)
Translates to: YKVTKLGCKDQQFLT*QHRSIRQKELGSYP
Trigger: TGGATAAGACCCTAATTCTTTCTGTCTGATTGATCTATGTTGGCATGTTAGAAACTGCTGATCTTTGCAGCCTAACTTGGTAACTTTATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
3UTR-3UTR TCA 90 bp TGGTGGCGTGCGCCTGTAATCCCAGCGCCACTGTGCTCTAGCCTGGGCGACAGACTGGGAAGACAGGTGTaGGCCACTGTGCCCCGAAAA +
Preference number: 2 (lower is better)
Translates to: WWRAPVIPAPLCSSLGDRLGRQV*ATVPRK
Trigger: TTTTCGGGGCACAGTGGCTCACACCTGTCTTCCCAG...TCTGTCGCCCAGGCTAGAGCACAGTGGCGCTGGGATTACAGGCGCACGCCACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
3UTR-3UTR GCA 90 bp TGGTGGCGTGCGCCTGTAATCCCAGCGCCACTGTGCTCTAGCCTGGGCGACAGACTGGGAGGTAGAGGTTaGAGTGAGCCAAGATTGCAC +
Preference number: 2 (lower is better)
Translates to: WWRAPVIPAPLCSSLGDRLGGRG*SEPRLH
Trigger: GTGCAATCTTGGCTCACTGCAACCTCTACCTCCCAG...TCTGTCGCCCAGGCTAGAGCACAGTGGCGCTGGGATTACAGGCGCACGCCACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
3UTR-3UTR GCA 90 bp TGGTGGCGTGCGCCTGTAATCCCAGCGCCACTGTGCTCTAGCCTGGGCGACAGAACAATCTCAGCTCACTaGAACCTCTGCCACCTGAGT +
Preference number: 2 (lower is better)
Translates to: WWRAPVIPAPLCSSLGDRTISAH*NLCHLS
Trigger: ACTCAGGTGGCAGAGGTTGCAGTGAGCTGAGATTGT...TCTGTCGCCCAGGCTAGAGCACAGTGGCGCTGGGATTACAGGCGCACGCCACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
3UTR-3UTR CCA 90 bp TGGTGGCGTGCGCCTGTAATCCCAGCGCCACTGTGCTCTAGCCTGGGCGACAGACCGGAAATCAAGAGTTaGAACAAGATTGGCCCTGCC +
Preference number: 2 (lower is better)
Translates to: WWRAPVIPAPLCSSLGDRPEIKS*NKIGPA
Trigger: GGCAGGGCCAATCTTGTTCCAACTCTTGATTTCCGG...TCTGTCGCCCAGGCTAGAGCACAGTGGCGCTGGGATTACAGGCGCACGCCACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
3UTR-3UTR TCA 90 bp TGGTGGCGTGCGCCTGTAATCCCAGCGCCACTGTGCTCTAGCCTGGGCGACAGAGCAACCTCTGCCACCTaGGTTTTATTTCAAAGACAA +
Preference number: 2 (lower is better)
Translates to: WWRAPVIPAPLCSSLGDRATSAT*VLFQRQ
Trigger: TTGTCTTTGAAATAAAACTCAGGTGGCAGAGGTTGC...TCTGTCGCCCAGGCTAGAGCACAGTGGCGCTGGGATTACAGGCGCACGCCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
3UTR-3UTR TCA 90 bp TGGTGGCGTGCGCCTGTAATCCCAGCGCCACTGTGCTCTAGCCTGGGCGACAGATACAGGAATGCAATGTaGAATAACCACATCGTGGAG +
Preference number: 2 (lower is better)
Translates to: WWRAPVIPAPLCSSLGDRYRNAM*NNHIVE
Trigger: CTCCACGATGTGGTTATTTCACATTGCATTCCTGTA...TCTGTCGCCCAGGCTAGAGCACAGTGGCGCTGGGATTACAGGCGCACGCCACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
3UTR-3UTR GCA 90 bp ATCACCTGTAGTGAGACACCTAAGGGGTTTGTGCTCCCAGATTCCACGGCTCTGTCACCCAGGCTGGATTaGAGTGCCACGATCACAGCT +
Preference number: 2 (lower is better)
Translates to: ITCSETPKGFVLPDSTALSPRLD*SATITA
Trigger: AGCTGTGATCGTGGCACTGCAATCCAGCCTGGGTGA...CAGAGCCGTGGAATCTGGGAGCACAAACCCCTTAGGTGTCTCACTACAGGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
3UTR-3UTR TCA 90 bp CACACACACACACACAACACACACAACACAGAGTCTACACTAGGGAGTTCTCCGCTGGGAAGACAGGTGTaGGCCACTGTGCCCCGAAAA +
Preference number: 2 (lower is better)
Translates to: HTHTHNTHNTESTLGSSPLGRQV*ATVPRK
Trigger: TTTTCGGGGCACAGTGGCTCACACCTGTCTTCCCAG...CGGAGAACTCCCTAGTGTAGACTCTGTGTTGTGTGTGTTGTGTGTGTGTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
3UTR-3UTR GCA 90 bp ACAAACAGCCATGTGAGTGAGCTTCACAGCAGATCCTCTCCAGTCAGTCCACGACAGGCTGGATTGCAGTaGCACGATCACAGCTCACTA +
Preference number: 2 (lower is better)
Translates to: TNSHVSELHSRSSPVSPRQAGLQ*HDHSSL
Trigger: TAGTGAGCTGTGATCGTGGCACTGCAATCCAGCCTG...TCGTGGACTGACTGGAGAGGATCTGCTGTGAAGCTCACTCACATGGCTGTTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
3UTR-3UTR GCA 90 bp GATGTTGGGCTGAGAGCTTGTGGCGAAGGAGAACCAGGGTGGCTTATTTTGTCTTGTCCCTTGCTTCCCTaGACTGACAGAACTCAGCTG +
Preference number: 2 (lower is better)
Translates to: DVGLRACGEGEPGWLILSCPLLP*TDRTQL
Trigger: CAGCTGAGTTCTGTCAGTGCAGGGAAGCAAGGGACA...AGACAAAATAAGCCACCCTGGTTCTCCTTCGCCACAAGCTCTCAGCCCAACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
3UTR-3UTR TCA 90 bp ACTCTACCGGAAGGCAGAGGGAAATCTCCATGGTCTTGGGTGCTTAGAGACCCAAACCAGGTCAGCACTTaGTATTGGGAGTGCCATACA +
Preference number: 2 (lower is better)
Translates to: TLPEGRGKSPWSWVLRDPNQVST*YWECHT
Trigger: TGTATGGCACTCCCAATATCAAGTGCTGACCTGGTT...TGGGTCTCTAAGCACCCAAGACCATGGAGATTTCCCTCTGCCTTCCGGTAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
3UTR-3UTR TCA 90 bp ATCACCTGTAGTGAGACACCTAAGGGGTTTGTGCTCCCAGATTCCACGGCTCTGAACCAGGTCAGCACTTaGTATTGGGAGTGCCATACA +
Preference number: 2 (lower is better)
Translates to: ITCSETPKGFVLPDSTALNQVST*YWECHT
Trigger: TGTATGGCACTCCCAATATCAAGTGCTGACCTGGTT...CAGAGCCGTGGAATCTGGGAGCACAAACCCCTTAGGTGTCTCACTACAGGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
3UTR-3UTR TCA 90 bp ACAAACAGCCATGTGAGTGAGCTTCACAGCAGATCCTCTCCAGTCAGTCCACGACAGATTCCACGGCTCTaGTTTCTGTGGGCTTATAGG +
Preference number: 2 (lower is better)
Translates to: TNSHVSELHSRSSPVSPRQIPRL*FLWAYR
Trigger: CCTATAAGCCCACAGAAATCAGAGCCGTGGAATCTG...TCGTGGACTGACTGGAGAGGATCTGCTGTGAAGCTCACTCACATGGCTGTTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
3UTR-3UTR TCA 90 bp ACTCTACCGGAAGGCAGAGGGAAATCTCCATGGTCTTGGGTGCTTAGAGACCCACTACAAACAGCCATGTaGGTGAGCTTCACAGCAGAT +
Preference number: 2 (lower is better)
Translates to: TLPEGRGKSPWSWVLRDPLQTAM*VSFTAD
Trigger: ATCTGCTGTGAAGCTCACTCACATGGCTGTTTGTAG...TGGGTCTCTAAGCACCCAAGACCATGGAGATTTCCCTCTGCCTTCCGGTAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
3UTR-3UTR GCA 90 bp ACAAACAGCCATGTGAGTGAGCTTCACAGCAGATCCTCTCCAGTCAGTCCACGAACAATCTCAGCTCACTaGAACCTCTGCCACCTGAGT +
Preference number: 2 (lower is better)
Translates to: TNSHVSELHSRSSPVSPRTISAH*NLCHLS
Trigger: ACTCAGGTGGCAGAGGTTGCAGTGAGCTGAGATTGT...TCGTGGACTGACTGGAGAGGATCTGCTGTGAAGCTCACTCACATGGCTGTTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
3UTR-3UTR GCA 90 bp GATGTTGGGCTGAGAGCTTGTGGCGAAGGAGAACCAGGGTGGCTTATTTTGTCTTGTTGCTCTGTCCCTTaGTTCCCTGCACTGACAGAA +
Preference number: 2 (lower is better)
Translates to: DVGLRACGEGEPGWLILSCCSVP*FPALTE
Trigger: TTCTGTCAGTGCAGGGAAGCAAGGGACAGAGCAACA...AGACAAAATAAGCCACCCTGGTTCTCCTTCGCCACAAGCTCTCAGCCCAACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
3UTR-3UTR CCA 90 bp ACTCTACCGGAAGGCAGAGGGAAATCTCCATGGTCTTGGGTGCTTAGAGACCCAGAGTTGGAACAAGATTaGCCCTGCCTAACATCACCT +
Preference number: 2 (lower is better)
Translates to: TLPEGRGKSPWSWVLRDPELEQD*PCLTSP
Trigger: AGGTGATGTTAGGCAGGGCCAATCTTGTTCCAACTC...TGGGTCTCTAAGCACCCAAGACCATGGAGATTTCCCTCTGCCTTCCGGTAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
3UTR-3UTR CCA 90 bp ACAAACAGCCATGTGAGTGAGCTTCACAGCAGATCCTCTCCAGTCAGTCCACGACCGGAAATCAAGAGTTaGAACAAGATTGGCCCTGCC +
Preference number: 2 (lower is better)
Translates to: TNSHVSELHSRSSPVSPRPEIKS*NKIGPA
Trigger: GGCAGGGCCAATCTTGTTCCAACTCTTGATTTCCGG...TCGTGGACTGACTGGAGAGGATCTGCTGTGAAGCTCACTCACATGGCTGTTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
3UTR-3UTR GCA 90 bp GTCCAGGAGAACATTGTTAAGTCTGTAGAAATATCCAGTGCAGAGGAAAGGGCGCACCTAAGGGGTTTGTaGTCCCAGATTCCACGGCTC +
Preference number: 2 (lower is better)
Translates to: VQENIVKSVEISSAEERAHLRGL*SQIPRL
Trigger: GAGCCGTGGAATCTGGGAGCACAAACCCCTTAGGTG...CGCCCTTTCCTCTGCACTGGATATTTCTACAGACTTAACAATGTTCTCCTGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
3UTR-3UTR CCA 90 bp ACAAACAGCCATGTGAGTGAGCTTCACAGCAGATCCTCTCCAGTCAGTCCACGAACTGTCTCTGAAACTTaGTGGTGGGAACTCAGAGGA +
Preference number: 2 (lower is better)
Translates to: TNSHVSELHSRSSPVSPRTVSET*WWELRG
Trigger: TCCTCTGAGTTCCCACCACCAAGTTTCAGAGACAGT...TCGTGGACTGACTGGAGAGGATCTGCTGTGAAGCTCACTCACATGGCTGTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
3UTR-3UTR CCA 90 bp CACACACACACACACAACACACACAACACAGAGTCTACACTAGGGAGTTCTCCGAATGAAAGTAGTGGCTaGGTGTGGTGGGTCATGCCT +
Preference number: 2 (lower is better)
Translates to: HTHTHNTHNTESTLGSSPNESSG*VWWVMP
Trigger: AGGCATGACCCACCACACCCAGCCACTACTTTCATT...CGGAGAACTCCCTAGTGTAGACTCTGTGTTGTGTGTGTTGTGTGTGTGTGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
3UTR-3UTR TCA 90 bp ATCACCTGTAGTGAGACACCTAAGGGGTTTGTGCTCCCAGATTCCACGGCTCTGCAACAGGATAATTTTTaGGGAAACCAGGTCAGCACT +
Preference number: 2 (lower is better)
Translates to: ITCSETPKGFVLPDSTALQQDNF*GNQVST
Trigger: AGTGCTGACCTGGTTTCCTCAAAAATTATCCTGTTG...CAGAGCCGTGGAATCTGGGAGCACAAACCCCTTAGGTGTCTCACTACAGGTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
3UTR-3UTR GCA 90 bp TGTGGGCTTATAGGGCTTGTATTTCAAAGGGATAGCATGTCAGACTCATTCTGGTCACCCAGGCTGGATTaGAGTGCCACGATCACAGCT +
Preference number: 2 (lower is better)
Translates to: CGLIGLVFQRDSMSDSFWSPRLD*SATITA
Trigger: AGCTGTGATCGTGGCACTGCAATCCAGCCTGGGTGA...CCAGAATGAGTCTGACATGCTATCCCTTTGAAATACAAGCCCTATAAGCCCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
3UTR-3UTR GCA 90 bp GATGTTGGGCTGAGAGCTTGTGGCGAAGGAGAACCAGGGTGGCTTATTTTGTCTGCTCACTGCAACCTCTaGCACCTGAGTTTTATTTCA +
Preference number: 2 (lower is better)
Translates to: DVGLRACGEGEPGWLILSAHCNL*HLSFIS
Trigger: TGAAATAAAACTCAGGTGGCAGAGGTTGCAGTGAGC...AGACAAAATAAGCCACCCTGGTTCTCCTTCGCCACAAGCTCTCAGCCCAACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
3UTR-3UTR GCA 90 bp GTCCAGGAGAACATTGTTAAGTCTGTAGAAATATCCAGTGCAGAGGAAAGGGCGCTCCATGGTCTTGGGTaGTTAGAGACCCATGTCCTG +
Preference number: 2 (lower is better)
Translates to: VQENIVKSVEISSAEERALHGLG*LETHVL
Trigger: CAGGACATGGGTCTCTAAGCACCCAAGACCATGGAG...CGCCCTTTCCTCTGCACTGGATATTTCTACAGACTTAACAATGTTCTCCTGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
3UTR-3UTR CCA 90 bp CACACACACACACACAACACACACAACACAGAGTCTACACTAGGGAGTTCTCCGGAGTTGGAACAAGATTaGCCCTGCCTAACATCACCT +
Preference number: 2 (lower is better)
Translates to: HTHTHNTHNTESTLGSSPELEQD*PCLTSP
Trigger: AGGTGATGTTAGGCAGGGCCAATCTTGTTCCAACTC...CGGAGAACTCCCTAGTGTAGACTCTGTGTTGTGTGTGTTGTGTGTGTGTGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
3UTR-3UTR CCA 90 bp CACACACACACACACAACACACACAACACAGAGTCTACACTAGGGAGTTCTCCGAGAGGGAAATCTCCATaGTCTTGGGTGCTTAGAGAC +
Preference number: 2 (lower is better)
Translates to: HTHTHNTHNTESTLGSSPRGKSP*SWVLRD
Trigger: GTCTCTAAGCACCCAAGACCATGGAGATTTCCCTCT...CGGAGAACTCCCTAGTGTAGACTCTGTGTTGTGTGTGTTGTGTGTGTGTGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
3UTR-3UTR TCA 90 bp ACAAACAGCCATGTGAGTGAGCTTCACAGCAGATCCTCTCCAGTCAGTCCACGATACAGGAATGCAATGTaGAATAACCACATCGTGGAG +
Preference number: 2 (lower is better)
Translates to: TNSHVSELHSRSSPVSPRYRNAM*NNHIVE
Trigger: CTCCACGATGTGGTTATTTCACATTGCATTCCTGTA...TCGTGGACTGACTGGAGAGGATCTGCTGTGAAGCTCACTCACATGGCTGTTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
3UTR-3UTR TCA 90 bp CACACACACACACACAACACACACAACACAGAGTCTACACTAGGGAGTTCTCCGGTGGCTTATTTTGTCTaGAGGTCCAGGAGAACATTG +
Preference number: 2 (lower is better)
Translates to: HTHTHNTHNTESTLGSSPVAYFV*RSRRTL
Trigger: CAATGTTCTCCTGGACCTTCAGACAAAATAAGCCAC...CGGAGAACTCCCTAGTGTAGACTCTGTGTTGTGTGTGTTGTGTGTGTGTGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
3UTR-3UTR TCA 90 bp ACCTGTAGTGAGACACCTAAGGGGTTTGTGCTCCCAGATTCCACGGCTCTGATTTTACTAGGAACCATTTaGCCCAACCAGCTTTCAAAT +
Preference number: 2 (lower is better)
Translates to: TCSETPKGFVLPDSTALILLGTI*PNQLSN
Trigger: ATTTGAAAGCTGGTTGGGTCAAATGGTTCCTAGTAA...AATCAGAGCCGTGGAATCTGGGAGCACAAACCCCTTAGGTGTCTCACTACAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
3UTR-3UTR TCA 90 bp GTCCAGGAGAACATTGTTAAGTCTGTAGAAATATCCAGTGCAGAGGAAAGGGCGCCACATCGTGGAGAATaGGGTATTCATCCCTCAACT +
Preference number: 2 (lower is better)
Translates to: VQENIVKSVEISSAEERAPHRGE*GIHPST
Trigger: AGTTGAGGGATGAATACCTCATTCTCCACGATGTGG...CGCCCTTTCCTCTGCACTGGATATTTCTACAGACTTAACAATGTTCTCCTGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
3UTR-3UTR TCA 90 bp GTCCAGGAGAACATTGTTAAGTCTGTAGAAATATCCAGTGCAGAGGAAAGGGCGGACAGTACAATGTCTTaGATGGTGAGGAACTCTACC +
Preference number: 2 (lower is better)
Translates to: VQENIVKSVEISSAEERADSTMS*MVRNST
Trigger: GGTAGAGTTCCTCACCATTCAAGACATTGTACTGTC...CGCCCTTTCCTCTGCACTGGATATTTCTACAGACTTAACAATGTTCTCCTGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
3UTR-3UTR GCA 90 bp GGTGCAACATATTCTTCTCATGGAAGGCCTGCTTCTTCTTTATTTACATGGTTCCTGGGAGGTAGAGGTTaGAGTGAGCCAAGATTGCAC +
Preference number: 2 (lower is better)
Translates to: GATYSSHGRPASSLFTWFLGGRG*SEPRLH
Trigger: GTGCAATCTTGGCTCACTGCAACCTCTACCTCCCAG...GAACCATGTAAATAAAGAAGAAGCAGGCCTTCCATGAGAAGAATATGTTGCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
3UTR-3UTR GCA 90 bp ACTCTACCGGAAGGCAGAGGGAAATCTCCATGGTCTTGGGTGCTTAGAGACCCATTCATTCAATGGATTTaGAGATATGACTCCCATTTC +
Preference number: 2 (lower is better)
Translates to: TLPEGRGKSPWSWVLRDPFIQWI*RYDSHF
Trigger: GAAATGGGAGTCATATCTGCAAATCCATTGAATGAA...TGGGTCTCTAAGCACCCAAGACCATGGAGATTTCCCTCTGCCTTCCGGTAGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
3UTR-3UTR GCA 90 bp ACAAACAGCCATGTGAGTGAGCTTCACAGCAGATCCTCTCCAGTCAGTCCACGATTCTCATGGAAGGCCTaGTTCTTCTTTATTTACATG +
Preference number: 2 (lower is better)
Translates to: TNSHVSELHSRSSPVSPRFSWKA*FFFIYM
Trigger: CATGTAAATAAAGAAGAAGCAGGCCTTCCATGAGAA...TCGTGGACTGACTGGAGAGGATCTGCTGTGAAGCTCACTCACATGGCTGTTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
3UTR-3UTR GCA 90 bp GTCCAGGAGAACATTGTTAAGTCTGTAGAAATATCCAGTGCAGAGGAAAGGGCGCTTAGGCCATTGTCCTaGAAGAACCTAAACCCTACA +
Preference number: 2 (lower is better)
Translates to: VQENIVKSVEISSAEERALRPLS*KNLNPT
Trigger: TGTAGGGTTTAGGTTCTTGCAGGACAATGGCCTAAG...CGCCCTTTCCTCTGCACTGGATATTTCTACAGACTTAACAATGTTCTCCTGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
3UTR-3UTR CCA 90 bp GATGTTGGGCTGAGAGCTTGTGGCGAAGGAGAACCAGGGTGGCTTATTTTGTCTACATGGTTCATTCAATaGATTTGCAGATATGACTCC +
Preference number: 2 (lower is better)
Translates to: DVGLRACGEGEPGWLILSTWFIQ*ICRYDS
Trigger: GGAGTCATATCTGCAAATCCATTGAATGAACCATGT...AGACAAAATAAGCCACCCTGGTTCTCCTTCGCCACAAGCTCTCAGCCCAACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
3UTR-3UTR CCA 90 bp ACAAACAGCCATGTGAGTGAGCTTCACAGCAGATCCTCTCCAGTCAGTCCACGAAACATATTCTTCTCATaGAAGGCCTGCTTCTTCTTT +
Preference number: 2 (lower is better)
Translates to: TNSHVSELHSRSSPVSPRNIFFS*KACFFF
Trigger: AAAGAAGAAGCAGGCCTTCCATGAGAAGAATATGTT...TCGTGGACTGACTGGAGAGGATCTGCTGTGAAGCTCACTCACATGGCTGTTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
3UTR-3UTR GCA 90 bp CACACACACACACACAACACACACAACACAGAGTCTACACTAGGGAGTTCTCCGTTCTCATGGAAGGCCTaGTTCTTCTTTATTTACATG +
Preference number: 2 (lower is better)
Translates to: HTHTHNTHNTESTLGSSPFSWKA*FFFIYM
Trigger: CATGTAAATAAAGAAGAAGCAGGCCTTCCATGAGAA...CGGAGAACTCCCTAGTGTAGACTCTGTGTTGTGTGTGTTGTGTGTGTGTGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
3UTR-3UTR TCA 90 bp GTCCAGGAGAACATTGTTAAGTCTGTAGAAATATCCAGTGCAGAGGAAAGGGCGTTACTAGGAACCATTTaGCCCAACCAGCTTTCAAAT +
Preference number: 2 (lower is better)
Translates to: VQENIVKSVEISSAEERALLGTI*PNQLSN
Trigger: ATTTGAAAGCTGGTTGGGTCAAATGGTTCCTAGTAA...CGCCCTTTCCTCTGCACTGGATATTTCTACAGACTTAACAATGTTCTCCTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
3UTR-3UTR GCA 90 bp GGTGCAACATATTCTTCTCATGGAAGGCCTGCTTCTTCTTTATTTACATGGTTCGCTCACTGCAACCTCTaGCACCTGAGTTTTATTTCA +
Preference number: 2 (lower is better)
Translates to: GATYSSHGRPASSLFTWFAHCNL*HLSFIS
Trigger: TGAAATAAAACTCAGGTGGCAGAGGTTGCAGTGAGC...GAACCATGTAAATAAAGAAGAAGCAGGCCTTCCATGAGAAGAATATGTTGCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
3UTR-3UTR CAA 90 bp ACCTGTAGTGAGACACCTAAGGGGTTTGTGCTCCCAGATTCCACGGCTCTGATTGTCACCCAGGCTGGATaGCAGTGCCACGATCACAGC +
Preference number: 3 (lower is better)
Translates to: TCSETPKGFVLPDSTALIVTQAG*QCHDHS
Trigger: GCTGTGATCGTGGCACTGCAATCCAGCCTGGGTGAC...AATCAGAGCCGTGGAATCTGGGAGCACAAACCCCTTAGGTGTCTCACTACAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
3UTR-3UTR CAA 90 bp ACTCTACCGGAAGGCAGAGGGAAATCTCCATGGTCTTGGGTGCTTAGAGACCCAAGACACCTAAGGGGTTaGTGCTCCCAGATTCCACGG +
Preference number: 3 (lower is better)
Translates to: TLPEGRGKSPWSWVLRDPRHLRG*CSQIPR
Trigger: CCGTGGAATCTGGGAGCACAAACCCCTTAGGTGTCT...TGGGTCTCTAAGCACCCAAGACCATGGAGATTTCCCTCTGCCTTCCGGTAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
3UTR-3UTR CAA 90 bp CACACACACACACACAACACACACAACACAGAGTCTACACTAGGGAGTTCTCCGAGACACCTAAGGGGTTaGTGCTCCCAGATTCCACGG +
Preference number: 3 (lower is better)
Translates to: HTHTHNTHNTESTLGSSPRHLRG*CSQIPR
Trigger: CCGTGGAATCTGGGAGCACAAACCCCTTAGGTGTCT...CGGAGAACTCCCTAGTGTAGACTCTGTGTTGTGTGTGTTGTGTGTGTGTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
3UTR-3UTR CAA 90 bp TGTGGGCTTATAGGGCTTGTATTTCAAAGGGATAGCATGTCAGACTCATTCTGGGTCACCCAGGCTGGATaGCAGTGCCACGATCACAGC +
Preference number: 3 (lower is better)
Translates to: CGLIGLVFQRDSMSDSFWVTQAG*QCHDHS
Trigger: GCTGTGATCGTGGCACTGCAATCCAGCCTGGGTGAC...CCAGAATGAGTCTGACATGCTATCCCTTTGAAATACAAGCCCTATAAGCCCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
3UTR-3UTR CAA 90 bp ACAAACAGCCATGTGAGTGAGCTTCACAGCAGATCCTCTCCAGTCAGTCCACGAAGAGTTGGAACAAGATaGGCCCTGCCTAACATCACC +
Preference number: 3 (lower is better)
Translates to: TNSHVSELHSRSSPVSPRRVGTR*ALPNIT
Trigger: GGTGATGTTAGGCAGGGCCAATCTTGTTCCAACTCT...TCGTGGACTGACTGGAGAGGATCTGCTGTGAAGCTCACTCACATGGCTGTTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
3UTR-3UTR CAA 90 bp CACACACACACACACAACACACACAACACAGAGTCTACACTAGGGAGTTCTCCGCCCGGAAATCAAGAGTaGGAACAAGATTGGCCCTGC +
Preference number: 3 (lower is better)
Translates to: HTHTHNTHNTESTLGSSPPGNQE*EQDWPC
Trigger: GCAGGGCCAATCTTGTTCCAACTCTTGATTTCCGGG...CGGAGAACTCCCTAGTGTAGACTCTGTGTTGTGTGTGTTGTGTGTGTGTGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
3UTR TCA 72 bp CTGCAAGAACCTAAACCCTACAAACAGCCATGTGAGTaGGCTTCACAGCAGATCCTCTCCAGTCAGTCCACG +
Preference number: 3 (lower is better)
Translates to: LQEPKPYKQPCE*ASQQILSSQST
Trigger: CGTGGACTGACTGGAGAGGATCTGCTGTGAAGCTCACTCACATGGCTGTTTGTAGGGTTTAGGTTCTTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
3UTR GCA 72 bp TGGCCCGGAAATCAAGAGTTGGAACAAGATTGGCCCTaGCTAACATCACCTGTAGTGAGACACCTAAGGGGT +
Preference number: 3 (lower is better)
Translates to: WPGNQELEQDWP*LTSPVVRHLRG
Trigger: ACCCCTTAGGTGTCTCACTACAGGTGATGTTAGGCAGGGCCAATCTTGTTCCAACTCTTGATTTCCGGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
3UTR CCA 72 bp ACTCTACCGGAAGGCAGAGGGAAATCTCCATGGTCTTaGGTGCTTAGAGACCCATGTCCTGGTAGAAGGATA +
Preference number: 3 (lower is better)
Translates to: TLPEGRGKSPWS*VLRDPCPGRRI
Trigger: TATCCTTCTACCAGGACATGGGTCTCTAAGCACCCAAGACCATGGAGATTTCCCTCTGCCTTCCGGTAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
3UTR CCA 72 bp GTTGGGCTGAGAGCTTGTGGCGAAGGAGAACCAGGGTaGCTTATTTTGTCTGAAGGTCCAGGAGAACATTGT +
Preference number: 3 (lower is better)
Translates to: VGLRACGEGEPG*LILSEGPGEHC
Trigger: ACAATGTTCTCCTGGACCTTCAGACAAAATAAGCCACCCTGGTTCTCCTTCGCCACAAGCTCTCAGCCCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
3UTR-3UTR CAA 90 bp GATGTTGGGCTGAGAGCTTGTGGCGAAGGAGAACCAGGGTGGCTTATTTTGTCTAAACCAGGTCAGCACTaGATATTGGGAGTGCCATAC +
Preference number: 3 (lower is better)
Translates to: DVGLRACGEGEPGWLILSKPGQH*ILGVPY
Trigger: GTATGGCACTCCCAATATCAAGTGCTGACCTGGTTT...AGACAAAATAAGCCACCCTGGTTCTCCTTCGCCACAAGCTCTCAGCCCAACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
3UTR-3UTR CAA 90 bp GTCCAGGAGAACATTGTTAAGTCTGTAGAAATATCCAGTGCAGAGGAAAGGGCGCTGTTGCTCTGTCCCTaGCTTCCCTGCACTGACAGA +
Preference number: 3 (lower is better)
Translates to: VQENIVKSVEISSAEERALLLCP*LPCTDR
Trigger: TCTGTCAGTGCAGGGAAGCAAGGGACAGAGCAACAG...CGCCCTTTCCTCTGCACTGGATATTTCTACAGACTTAACAATGTTCTCCTGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
3UTR GCA 72 bp TGTGGCAACAAACTGAGGGGCCTTAGGCCATTGTCCTaGAAGAACCTAAACCCTACAAACAGCCATGTGAGT +
Preference number: 3 (lower is better)
Translates to: CGNKLRGLRPLS*KNLNPTNSHVS
Trigger: ACTCACATGGCTGTTTGTAGGGTTTAGGTTCTTGCAGGACAATGGCCTAAGGCCCCTCAGTTTGTTGCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
3UTR-3UTR CAA 90 bp ACCTGTAGTGAGACACCTAAGGGGTTTGTGCTCCCAGATTCCACGGCTCTGATTTCTCAGTCTCCTCCTTaGAGAAATGCAGTGAATGAG +
Preference number: 3 (lower is better)
Translates to: TCSETPKGFVLPDSTALISQSPP*RNAVNE
Trigger: CTCATTCACTGCATTTCTCAAAGGAGGAGACTGAGA...AATCAGAGCCGTGGAATCTGGGAGCACAAACCCCTTAGGTGTCTCACTACAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
3UTR TCA 72 bp CACCTAAGGGGTTTGTGCTCCCAGATTCCACGGCTCTaGTTTCTGTGGGCTTATAGGGCTTGTATTTCAAAG +
Preference number: 3 (lower is better)
Translates to: HLRGLCSQIPRL*FLWAYRACISK
Trigger: CTTTGAAATACAAGCCCTATAAGCCCACAGAAATCAGAGCCGTGGAATCTGGGAGCACAAACCCCTTAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
3UTR TCA 72 bp TCTCCAGTCAGTCCACGAGATGACTGCAACCCTGGCTaGCATCTGATTGCAGTCTTGTTAGATATGGGGAAA +
Preference number: 3 (lower is better)
Translates to: SPVSPRDDCNPG*HLIAVLLDMGK
Trigger: TTTCCCCATATCTAACAAGACTGCAATCAGATGTCAGCCAGGGTTGCAGTCATCTCGTGGACTGACTGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
3UTR-3UTR CAA 90 bp ACTCTACCGGAAGGCAGAGGGAAATCTCCATGGTCTTGGGTGCTTAGAGACCCAATTACTAGGAACCATTaGACCCAACCAGCTTTCAAA +
Preference number: 3 (lower is better)
Translates to: TLPEGRGKSPWSWVLRDPITRNH*TQPAFK
Trigger: TTTGAAAGCTGGTTGGGTCAAATGGTTCCTAGTAAT...TGGGTCTCTAAGCACCCAAGACCATGGAGATTTCCCTCTGCCTTCCGGTAGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
3UTR-3UTR CAA 90 bp GATGTTGGGCTGAGAGCTTGTGGCGAAGGAGAACCAGGGTGGCTTATTTTGTCTATTACTAGGAACCATTaGACCCAACCAGCTTTCAAA +
Preference number: 3 (lower is better)
Translates to: DVGLRACGEGEPGWLILSITRNH*TQPAFK
Trigger: TTTGAAAGCTGGTTGGGTCAAATGGTTCCTAGTAAT...AGACAAAATAAGCCACCCTGGTTCTCCTTCGCCACAAGCTCTCAGCCCAACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
3UTR CCA 72 bp ATACAATGGCCCGGAAATCAAGAGTTGGAACAAGATTaGCCCTGCCTAACATCACCTGTAGTGAGACACCTA +
Preference number: 3 (lower is better)
Translates to: IQWPGNQELEQD*PCLTSPVVRHL
Trigger: TAGGTGTCTCACTACAGGTGATGTTAGGCAGGGCCAATCTTGTTCCAACTCTTGATTTCCGGGCCATTGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
3UTR-3UTR CAA 90 bp TGTGGGCTTATAGGGCTTGTATTTCAAAGGGATAGCATGTCAGACTCATTCTGGGGTCAGCACTTGATATaGGGAGTGCCATACACATCA +
Preference number: 3 (lower is better)
Translates to: CGLIGLVFQRDSMSDSFWGQHLI*GVPYTS
Trigger: TGATGTGTATGGCACTCCCAATATCAAGTGCTGACC...CCAGAATGAGTCTGACATGCTATCCCTTTGAAATACAAGCCCTATAAGCCCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
3UTR-3UTR CAA 90 bp TGTGGGCTTATAGGGCTTGTATTTCAAAGGGATAGCATGTCAGACTCATTCTGGTCTCAGTCTCCTCCTTaGAGAAATGCAGTGAATGAG +
Preference number: 3 (lower is better)
Translates to: CGLIGLVFQRDSMSDSFWSQSPP*RNAVNE
Trigger: CTCATTCACTGCATTTCTCAAAGGAGGAGACTGAGA...CCAGAATGAGTCTGACATGCTATCCCTTTGAAATACAAGCCCTATAAGCCCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
3UTR TCA 72 bp CATGGAATTTTTCTGACAGTACAATGTCTTGAATGGTaGGGAACTCTACCGGAAGGCAGAGGGAAATCTCCA +
Preference number: 3 (lower is better)
Translates to: HGIFLTVQCLEW*GTLPEGRGKSP
Trigger: TGGAGATTTCCCTCTGCCTTCCGGTAGAGTTCCTCACCATTCAAGACATTGTACTGTCAGAAAAATTCCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
3UTR TCA 72 bp TCTACAGCATGGAATTTTTCTGACAGTACAATGTCTTaGATGGTGAGGAACTCTACCGGAAGGCAGAGGGAA +
Preference number: 3 (lower is better)
Translates to: STAWNFSDSTMS*MVRNSTGRQRE
Trigger: TTCCCTCTGCCTTCCGGTAGAGTTCCTCACCATTCAAGACATTGTACTGTCAGAAAAATTCCATGCTGTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
3UTR-3UTR CAA 90 bp TGTGGGCTTATAGGGCTTGTATTTCAAAGGGATAGCATGTCAGACTCATTCTGGGGGCAAAGTGTCAGATaGTTAGGATATACTCTACCT +
Preference number: 3 (lower is better)
Translates to: CGLIGLVFQRDSMSDSFWGQSVR*LGYTLP
Trigger: AGGTAGAGTATATCCTAACAATCTGACACTTTGCCC...CCAGAATGAGTCTGACATGCTATCCCTTTGAAATACAAGCCCTATAAGCCCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
3UTR TCA 72 bp ATGTCCATGTGCCAGTTCTACAGCATGGAATTTTTCTaGCAGTACAATGTCTTGAATGGTGAGGAACTCTAC +
Preference number: 3 (lower is better)
Translates to: MSMCQFYSMEFF*QYNVLNGEELY
Trigger: GTAGAGTTCCTCACCATTCAAGACATTGTACTGTCAGAAAAATTCCATGCTGTAGAACTGGCACATGGACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
3UTR TCA 72 bp TCCATCTCAGTCTCCTCCTTTGAGAAATGCAGTGAATaGGACAAAATTTCTCACGAAATGTTTTCAGGATTG +
Preference number: 3 (lower is better)
Translates to: SISVSSFEKCSE*DKISHEMFSGL
Trigger: CAATCCTGAAAACATTTCGTGAGAAATTTTGTCTCATTCACTGCATTTCTCAAAGGAGGAGACTGAGATGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
3UTR CCA 72 bp TCTTCTCATGGAAGGCCTGCTTCTTCTTTATTTACATaGTTCATTCAATGGATTTGCAGATATGACTCCCAT +
Preference number: 3 (lower is better)
Translates to: SSHGRPASSLFT*FIQWICRYDSH
Trigger: ATGGGAGTCATATCTGCAAATCCATTGAATGAACCATGTAAATAAAGAAGAAGCAGGCCTTCCATGAGAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
3UTR CCA 72 bp TTTGATACAGGAATGCAATGTGAAATAACCACATCGTaGAGAATGAGGTATTCATCCCTCAACTATTTATCT +
Preference number: 3 (lower is better)
Translates to: FDTGMQCEITTS*RMRYSSLNYLS
Trigger: AGATAAATAGTTGAGGGATGAATACCTCATTCTCCACGATGTGGTTATTTCACATTGCATTCCTGTATCAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR CCA 90 bp TGGTGGCGTGCGCCTGTAATCCCAGCGCCACTGTGCTCTAGCCTGGGCGACAGATGGGCTGAGAGCTTGTaGCGAAGGAGAACCAGGGTG +
Preference number: 4 (lower is better)
Translates to: WWRAPVIPAPLCSSLGDRWAESL*RRRTRV
Trigger: CACCCTGGTTCTCCTTCGCCACAAGCTCTCAGCCCA...TCTGTCGCCCAGGCTAGAGCACAGTGGCGCTGGGATTACAGGCGCACGCCACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR TCA 90 bp TGGTGGCGTGCGCCTGTAATCCCAGCGCCACTGTGCTCTAGCCTGGGCGACAGACAGATTCCACGGCTCTaGTTTCTGTGGGCTTATAGG +
Preference number: 4 (lower is better)
Translates to: WWRAPVIPAPLCSSLGDRQIPRL*FLWAYR
Trigger: CCTATAAGCCCACAGAAATCAGAGCCGTGGAATCTG...TCTGTCGCCCAGGCTAGAGCACAGTGGCGCTGGGATTACAGGCGCACGCCACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR GCA 90 bp TGGTGGCGTGCGCCTGTAATCCCAGCGCCACTGTGCTCTAGCCTGGGCGACAGAGAACAAGATTGGCCCTaGCTAACATCACCTGTAGTG +
Preference number: 4 (lower is better)
Translates to: WWRAPVIPAPLCSSLGDREQDWP*LTSPVV
Trigger: CACTACAGGTGATGTTAGGCAGGGCCAATCTTGTTC...TCTGTCGCCCAGGCTAGAGCACAGTGGCGCTGGGATTACAGGCGCACGCCACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR GCA 90 bp TGGTGGCGTGCGCCTGTAATCCCAGCGCCACTGTGCTCTAGCCTGGGCGACAGAGCTCACTGCAACCTCTaGCACCTGAGTTTTATTTCA +
Preference number: 4 (lower is better)
Translates to: WWRAPVIPAPLCSSLGDRAHCNL*HLSFIS
Trigger: TGAAATAAAACTCAGGTGGCAGAGGTTGCAGTGAGC...TCTGTCGCCCAGGCTAGAGCACAGTGGCGCTGGGATTACAGGCGCACGCCACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR TCA 90 bp ATCACCTGTAGTGAGACACCTAAGGGGTTTGTGCTCCCAGATTCCACGGCTCTGCTGGGAAGACAGGTGTaGGCCACTGTGCCCCGAAAA +
Preference number: 4 (lower is better)
Translates to: ITCSETPKGFVLPDSTALLGRQV*ATVPRK
Trigger: TTTTCGGGGCACAGTGGCTCACACCTGTCTTCCCAG...CAGAGCCGTGGAATCTGGGAGCACAAACCCCTTAGGTGTCTCACTACAGGTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR TCA 90 bp ACTCTACCGGAAGGCAGAGGGAAATCTCCATGGTCTTGGGTGCTTAGAGACCCAGGCTGCAGTGAGCTATaGCTGAGCCGCTTCACTGCA +
Preference number: 4 (lower is better)
Translates to: TLPEGRGKSPWSWVLRDPGCSEL*LSRFTA
Trigger: TGCAGTGAAGCGGCTCAGTCATAGCTCACTGCAGCC...TGGGTCTCTAAGCACCCAAGACCATGGAGATTTCCCTCTGCCTTCCGGTAGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR GCA 90 bp TGGTGGCGTGCGCCTGTAATCCCAGCGCCACTGTGCTCTAGCCTGGGCGACAGATGGCTGACATCTGATTaGAGTCTTGTTAGATATGGG +
Preference number: 4 (lower is better)
Translates to: WWRAPVIPAPLCSSLGDRWLTSD*SLVRYG
Trigger: CCCATATCTAACAAGACTGCAATCAGATGTCAGCCA...TCTGTCGCCCAGGCTAGAGCACAGTGGCGCTGGGATTACAGGCGCACGCCACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR GCA 90 bp ATCACCTGTAGTGAGACACCTAAGGGGTTTGTGCTCCCAGATTCCACGGCTCTGCACCTAAGGGGTTTGTaGTCCCAGATTCCACGGCTC +
Preference number: 4 (lower is better)
Translates to: ITCSETPKGFVLPDSTALHLRGL*SQIPRL
Trigger: GAGCCGTGGAATCTGGGAGCACAAACCCCTTAGGTG...CAGAGCCGTGGAATCTGGGAGCACAAACCCCTTAGGTGTCTCACTACAGGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR CCA 90 bp ATCACCTGTAGTGAGACACCTAAGGGGTTTGTGCTCCCAGATTCCACGGCTCTGCCCACCAGCCCTCACTaGGTCACACTAACTCTGATG +
Preference number: 4 (lower is better)
Translates to: ITCSETPKGFVLPDSTALPTSPH*VTLTLM
Trigger: CATCAGAGTTAGTGTGACCCAGTGAGGGCTGGTGGG...CAGAGCCGTGGAATCTGGGAGCACAAACCCCTTAGGTGTCTCACTACAGGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR CCA 90 bp GATGTTGGGCTGAGAGCTTGTGGCGAAGGAGAACCAGGGTGGCTTATTTTGTCTTGGGCTGAGAGCTTGTaGCGAAGGAGAACCAGGGTG +
Preference number: 4 (lower is better)
Translates to: DVGLRACGEGEPGWLILSWAESL*RRRTRV
Trigger: CACCCTGGTTCTCCTTCGCCACAAGCTCTCAGCCCA...AGACAAAATAAGCCACCCTGGTTCTCCTTCGCCACAAGCTCTCAGCCCAACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR TCA 90 bp ATCACCTGTAGTGAGACACCTAAGGGGTTTGTGCTCCCAGATTCCACGGCTCTGATTGTGATGTTGGGCTaGGAGCTTGTGGCGAAGGAG +
Preference number: 4 (lower is better)
Translates to: ITCSETPKGFVLPDSTALIVMLG*ELVAKE
Trigger: CTCCTTCGCCACAAGCTCTCAGCCCAACATCACAAT...CAGAGCCGTGGAATCTGGGAGCACAAACCCCTTAGGTGTCTCACTACAGGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR GCA 90 bp ACTCTACCGGAAGGCAGAGGGAAATCTCCATGGTCTTGGGTGCTTAGAGACCCACAGGCTGGATTGCAGTaGCACGATCACAGCTCACTA +
Preference number: 4 (lower is better)
Translates to: TLPEGRGKSPWSWVLRDPQAGLQ*HDHSSL
Trigger: TAGTGAGCTGTGATCGTGGCACTGCAATCCAGCCTG...TGGGTCTCTAAGCACCCAAGACCATGGAGATTTCCCTCTGCCTTCCGGTAGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR CCA 90 bp TGGTGGCGTGCGCCTGTAATCCCAGCGCCACTGTGCTCTAGCCTGGGCGACAGAAACATATTCTTCTCATaGAAGGCCTGCTTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: WWRAPVIPAPLCSSLGDRNIFFS*KACFFF
Trigger: AAAGAAGAAGCAGGCCTTCCATGAGAAGAATATGTT...TCTGTCGCCCAGGCTAGAGCACAGTGGCGCTGGGATTACAGGCGCACGCCACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR TCA 90 bp GATGTTGGGCTGAGAGCTTGTGGCGAAGGAGAACCAGGGTGGCTTATTTTGTCTCTTGCTTCCCTGCACTaGCAGAACTCAGCTGGCATA +
Preference number: 4 (lower is better)
Translates to: DVGLRACGEGEPGWLILSLASLH*QNSAGI
Trigger: TATGCCAGCTGAGTTCTGTCAGTGCAGGGAAGCAAG...AGACAAAATAAGCCACCCTGGTTCTCCTTCGCCACAAGCTCTCAGCCCAACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR TCA 90 bp ACTCTACCGGAAGGCAGAGGGAAATCTCCATGGTCTTGGGTGCTTAGAGACCCACAATGTCTTGAATGGTaGGGAACTCTACCGGAAGGC +
Preference number: 4 (lower is better)
Translates to: TLPEGRGKSPWSWVLRDPQCLEW*GTLPEG
Trigger: GCCTTCCGGTAGAGTTCCTCACCATTCAAGACATTG...TGGGTCTCTAAGCACCCAAGACCATGGAGATTTCCCTCTGCCTTCCGGTAGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR TCA 90 bp GATGTTGGGCTGAGAGCTTGTGGCGAAGGAGAACCAGGGTGGCTTATTTTGTCTATTGTGATGTTGGGCTaGGAGCTTGTGGCGAAGGAG +
Preference number: 4 (lower is better)
Translates to: DVGLRACGEGEPGWLILSIVMLG*ELVAKE
Trigger: CTCCTTCGCCACAAGCTCTCAGCCCAACATCACAAT...AGACAAAATAAGCCACCCTGGTTCTCCTTCGCCACAAGCTCTCAGCCCAACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR TCA 90 bp ACCTGTAGTGAGACACCTAAGGGGTTTGTGCTCCCAGATTCCACGGCTCTGATTAGGGAGTTCTCCGCCTaGAGTGAGATGAGCTCTTTC +
Preference number: 4 (lower is better)
Translates to: TCSETPKGFVLPDSTALIREFSA*SEMSSF
Trigger: GAAAGAGCTCATCTCACTTCAGGCGGAGAACTCCCT...AATCAGAGCCGTGGAATCTGGGAGCACAAACCCCTTAGGTGTCTCACTACAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR TCA 90 bp ACCTGTAGTGAGACACCTAAGGGGTTTGTGCTCCCAGATTCCACGGCTCTGATTAGCAGGAGGGTCACTTaGGACCAGAAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: TCSETPKGFVLPDSTALISRRVT*DQKFKT
Trigger: GGTCTTGAACTTCTGGTCTCAAGTGACCCTCCTGCT...AATCAGAGCCGTGGAATCTGGGAGCACAAACCCCTTAGGTGTCTCACTACAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR GCA 90 bp GATGTTGGGCTGAGAGCTTGTGGCGAAGGAGAACCAGGGTGGCTTATTTTGTCTCTGGGAGGTAGAGGTTaGAGTGAGCCAAGATTGCAC +
Preference number: 4 (lower is better)
Translates to: DVGLRACGEGEPGWLILSLGGRG*SEPRLH
Trigger: GTGCAATCTTGGCTCACTGCAACCTCTACCTCCCAG...AGACAAAATAAGCCACCCTGGTTCTCCTTCGCCACAAGCTCTCAGCCCAACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR GCA 90 bp ACAAACAGCCATGTGAGTGAGCTTCACAGCAGATCCTCTCCAGTCAGTCCACGACTGGGAGGTAGAGGTTaGAGTGAGCCAAGATTGCAC +
Preference number: 4 (lower is better)
Translates to: TNSHVSELHSRSSPVSPRLGGRG*SEPRLH
Trigger: GTGCAATCTTGGCTCACTGCAACCTCTACCTCCCAG...TCGTGGACTGACTGGAGAGGATCTGCTGTGAAGCTCACTCACATGGCTGTTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR GCA 90 bp ACTCTACCGGAAGGCAGAGGGAAATCTCCATGGTCTTGGGTGCTTAGAGACCCAACAATCTCAGCTCACTaGAACCTCTGCCACCTGAGT +
Preference number: 4 (lower is better)
Translates to: TLPEGRGKSPWSWVLRDPTISAH*NLCHLS
Trigger: ACTCAGGTGGCAGAGGTTGCAGTGAGCTGAGATTGT...TGGGTCTCTAAGCACCCAAGACCATGGAGATTTCCCTCTGCCTTCCGGTAGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR CCA 90 bp ATCACCTGTAGTGAGACACCTAAGGGGTTTGTGCTCCCAGATTCCACGGCTCTGAATGAAAGTAGTGGCTaGGTGTGGTGGGTCATGCCT +
Preference number: 4 (lower is better)
Translates to: ITCSETPKGFVLPDSTALNESSG*VWWVMP
Trigger: AGGCATGACCCACCACACCCAGCCACTACTTTCATT...CAGAGCCGTGGAATCTGGGAGCACAAACCCCTTAGGTGTCTCACTACAGGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR CCA 90 bp GATGTTGGGCTGAGAGCTTGTGGCGAAGGAGAACCAGGGTGGCTTATTTTGTCTACAATCTCACCACTTTaGGAGGCTGAAGCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: DVGLRACGEGEPGWLILSTISPL*EAEAGG
Trigger: CCCTCCTGCTTCAGCCTCCCAAAGTGGTGAGATTGT...AGACAAAATAAGCCACCCTGGTTCTCCTTCGCCACAAGCTCTCAGCCCAACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR CCA 90 bp ACCTGTAGTGAGACACCTAAGGGGTTTGTGCTCCCAGATTCCACGGCTCTGATTACAATCTCACCACTTTaGGAGGCTGAAGCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: TCSETPKGFVLPDSTALITISPL*EAEAGG
Trigger: CCCTCCTGCTTCAGCCTCCCAAAGTGGTGAGATTGT...AATCAGAGCCGTGGAATCTGGGAGCACAAACCCCTTAGGTGTCTCACTACAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR TCA 90 bp GTCCAGGAGAACATTGTTAAGTCTGTAGAAATATCCAGTGCAGAGGAAAGGGCGCTGGGAAGACAGGTGTaGGCCACTGTGCCCCGAAAA +
Preference number: 4 (lower is better)
Translates to: VQENIVKSVEISSAEERALGRQV*ATVPRK
Trigger: TTTTCGGGGCACAGTGGCTCACACCTGTCTTCCCAG...CGCCCTTTCCTCTGCACTGGATATTTCTACAGACTTAACAATGTTCTCCTGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR TCA 90 bp GATGTTGGGCTGAGAGCTTGTGGCGAAGGAGAACCAGGGTGGCTTATTTTGTCTCAGATTCCACGGCTCTaGTTTCTGTGGGCTTATAGG +
Preference number: 4 (lower is better)
Translates to: DVGLRACGEGEPGWLILSQIPRL*FLWAYR
Trigger: CCTATAAGCCCACAGAAATCAGAGCCGTGGAATCTG...AGACAAAATAAGCCACCCTGGTTCTCCTTCGCCACAAGCTCTCAGCCCAACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR TCA 90 bp ACTCTACCGGAAGGCAGAGGGAAATCTCCATGGTCTTGGGTGCTTAGAGACCCAGTTTGTCACTGTCTCTaGAACTTGGTGGTGGGAACT +
Preference number: 4 (lower is better)
Translates to: TLPEGRGKSPWSWVLRDPVCHCL*NLVVGT
Trigger: AGTTCCCACCACCAAGTTTCAGAGACAGTGACAAAC...TGGGTCTCTAAGCACCCAAGACCATGGAGATTTCCCTCTGCCTTCCGGTAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR TCA 90 bp ACAAACAGCCATGTGAGTGAGCTTCACAGCAGATCCTCTCCAGTCAGTCCACGAAAACAGCCATGTGAGTaGGCTTCACAGCAGATCCTC +
Preference number: 4 (lower is better)
Translates to: TNSHVSELHSRSSPVSPRKQPCE*ASQQIL
Trigger: GAGGATCTGCTGTGAAGCTCACTCACATGGCTGTTT...TCGTGGACTGACTGGAGAGGATCTGCTGTGAAGCTCACTCACATGGCTGTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR GCA 90 bp AGCCGGATATTTAAACCCACAACATTTGCCTTAGGGGTACGCAGTGTGTCCTCTCACCTAAGGGGTTTGTaGTCCCAGATTCCACGGCTC +
Preference number: 4 (lower is better)
Translates to: SRIFKPTTFALGVRSVSSHLRGL*SQIPRL
Trigger: GAGCCGTGGAATCTGGGAGCACAAACCCCTTAGGTG...AGAGGACACACTGCGTACCCCTAAGGCAAATGTTGTGGGTTTAAATATCCGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR GCA 90 bp ACAAACAGCCATGTGAGTGAGCTTCACAGCAGATCCTCTCCAGTCAGTCCACGATGTTGCTCTGTCCCTTaGTTCCCTGCACTGACAGAA +
Preference number: 4 (lower is better)
Translates to: TNSHVSELHSRSSPVSPRCCSVP*FPALTE
Trigger: TTCTGTCAGTGCAGGGAAGCAAGGGACAGAGCAACA...TCGTGGACTGACTGGAGAGGATCTGCTGTGAAGCTCACTCACATGGCTGTTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR CCA 90 bp AGCCGGATATTTAAACCCACAACATTTGCCTTAGGGGTACGCAGTGTGTCCTCTGGCCCTGATTTGTCATaGACAAGAGTCGGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: SRIFKPTTFALGVRSVSSGPDLS*TRVGPA
Trigger: AGCAGGGCCGACTCTTGTCCATGACAAATCAGGGCC...AGAGGACACACTGCGTACCCCTAAGGCAAATGTTGTGGGTTTAAATATCCGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR CCA 90 bp GATGTTGGGCTGAGAGCTTGTGGCGAAGGAGAACCAGGGTGGCTTATTTTGTCTCCGGAAATCAAGAGTTaGAACAAGATTGGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: DVGLRACGEGEPGWLILSPEIKS*NKIGPA
Trigger: GGCAGGGCCAATCTTGTTCCAACTCTTGATTTCCGG...AGACAAAATAAGCCACCCTGGTTCTCCTTCGCCACAAGCTCTCAGCCCAACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR CCA 90 bp GATGTTGGGCTGAGAGCTTGTGGCGAAGGAGAACCAGGGTGGCTTATTTTGTCTTCTGGCTGGGCATGGTaGTCTGTACCTACAATCTCA +
Preference number: 4 (lower is better)
Translates to: DVGLRACGEGEPGWLILSSGWAW*SVPTIS
Trigger: TGAGATTGTAGGTACAGACCACCATGCCCAGCCAGA...AGACAAAATAAGCCACCCTGGTTCTCCTTCGCCACAAGCTCTCAGCCCAACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR TCA 90 bp ACCTGTAGTGAGACACCTAAGGGGTTTGTGCTCCCAGATTCCACGGCTCTGATTAACCAGGTCAGCACTTaGTATTGGGAGTGCCATACA +
Preference number: 4 (lower is better)
Translates to: TCSETPKGFVLPDSTALINQVST*YWECHT
Trigger: TGTATGGCACTCCCAATATCAAGTGCTGACCTGGTT...AATCAGAGCCGTGGAATCTGGGAGCACAAACCCCTTAGGTGTCTCACTACAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR TCA 90 bp GATGTTGGGCTGAGAGCTTGTGGCGAAGGAGAACCAGGGTGGCTTATTTTGTCTGTTTGTCACTGTCTCTaGAACTTGGTGGTGGGAACT +
Preference number: 4 (lower is better)
Translates to: DVGLRACGEGEPGWLILSVCHCL*NLVVGT
Trigger: AGTTCCCACCACCAAGTTTCAGAGACAGTGACAAAC...AGACAAAATAAGCCACCCTGGTTCTCCTTCGCCACAAGCTCTCAGCCCAACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR TCA 90 bp GATGTTGGGCTGAGAGCTTGTGGCGAAGGAGAACCAGGGTGGCTTATTTTGTCTCTACAAACAGCCATGTaGGTGAGCTTCACAGCAGAT +
Preference number: 4 (lower is better)
Translates to: DVGLRACGEGEPGWLILSLQTAM*VSFTAD
Trigger: ATCTGCTGTGAAGCTCACTCACATGGCTGTTTGTAG...AGACAAAATAAGCCACCCTGGTTCTCCTTCGCCACAAGCTCTCAGCCCAACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR TCA 90 bp ACTCTACCGGAAGGCAGAGGGAAATCTCCATGGTCTTGGGTGCTTAGAGACCCAGTGGCTTATTTTGTCTaGAGGTCCAGGAGAACATTG +
Preference number: 4 (lower is better)
Translates to: TLPEGRGKSPWSWVLRDPVAYFV*RSRRTL
Trigger: CAATGTTCTCCTGGACCTTCAGACAAAATAAGCCAC...TGGGTCTCTAAGCACCCAAGACCATGGAGATTTCCCTCTGCCTTCCGGTAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR TCA 90 bp ACAAACAGCCATGTGAGTGAGCTTCACAGCAGATCCTCTCCAGTCAGTCCACGAGTTCTCCGCCTGAAGTaGGATGAGCTCTTTCTTGAT +
Preference number: 4 (lower is better)
Translates to: TNSHVSELHSRSSPVSPRVLRLK*DELFLD
Trigger: ATCAAGAAAGAGCTCATCTCACTTCAGGCGGAGAAC...TCGTGGACTGACTGGAGAGGATCTGCTGTGAAGCTCACTCACATGGCTGTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR TCA 90 bp TGTGGGCTTATAGGGCTTGTATTTCAAAGGGATAGCATGTCAGACTCATTCTGGGGCTGCAGTGAGCTATaGCTGAGCCGCTTCACTGCA +
Preference number: 4 (lower is better)
Translates to: CGLIGLVFQRDSMSDSFWGCSEL*LSRFTA
Trigger: TGCAGTGAAGCGGCTCAGTCATAGCTCACTGCAGCC...CCAGAATGAGTCTGACATGCTATCCCTTTGAAATACAAGCCCTATAAGCCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR GCA 90 bp CACACACACACACACAACACACACAACACAGAGTCTACACTAGGGAGTTCTCCGGGCGACATGTCCATGTaGCAGTTCTACAGCATGGAA +
Preference number: 4 (lower is better)
Translates to: HTHTHNTHNTESTLGSSPGDMSM*QFYSME
Trigger: TTCCATGCTGTAGAACTGGCACATGGACATGTCGCC...CGGAGAACTCCCTAGTGTAGACTCTGTGTTGTGTGTGTTGTGTGTGTGTGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR CCA 90 bp GATGTTGGGCTGAGAGCTTGTGGCGAAGGAGAACCAGGGTGGCTTATTTTGTCTATTAAAGACGGGCCCTaGATTCCAAGGAGTGAGAAC +
Preference number: 4 (lower is better)
Translates to: DVGLRACGEGEPGWLILSIKDGP*IPRSEN
Trigger: GTTCTCACTCCTTGGAATCCAGGGCCCGTCTTTAAT...AGACAAAATAAGCCACCCTGGTTCTCCTTCGCCACAAGCTCTCAGCCCAACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR CCA 90 bp ACAAACAGCCATGTGAGTGAGCTTCACAGCAGATCCTCTCCAGTCAGTCCACGAAGAGGGAAATCTCCATaGTCTTGGGTGCTTAGAGAC +
Preference number: 4 (lower is better)
Translates to: TNSHVSELHSRSSPVSPRRGKSP*SWVLRD
Trigger: GTCTCTAAGCACCCAAGACCATGGAGATTTCCCTCT...TCGTGGACTGACTGGAGAGGATCTGCTGTGAAGCTCACTCACATGGCTGTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR CCA 90 bp CACACACACACACACAACACACACAACACAGAGTCTACACTAGGGAGTTCTCCGTCTGGCTGGGCATGGTaGTCTGTACCTACAATCTCA +
Preference number: 4 (lower is better)
Translates to: HTHTHNTHNTESTLGSSPSGWAW*SVPTIS
Trigger: TGAGATTGTAGGTACAGACCACCATGCCCAGCCAGA...CGGAGAACTCCCTAGTGTAGACTCTGTGTTGTGTGTGTTGTGTGTGTGTGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR CCA 90 bp ACAAACAGCCATGTGAGTGAGCTTCACAGCAGATCCTCTCCAGTCAGTCCACGAACCATAATATCTGGCTaGGCATGGTGGTCTGTACCT +
Preference number: 4 (lower is better)
Translates to: TNSHVSELHSRSSPVSPRTIISG*AWWSVP
Trigger: AGGTACAGACCACCATGCCCAGCCAGATATTATGGT...TCGTGGACTGACTGGAGAGGATCTGCTGTGAAGCTCACTCACATGGCTGTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR TCA 90 bp GATGTTGGGCTGAGAGCTTGTGGCGAAGGAGAACCAGGGTGGCTTATTTTGTCTCCAGGCTCATTACTGTaGAGGCTAGTACTTATTCTC +
Preference number: 4 (lower is better)
Translates to: DVGLRACGEGEPGWLILSPGSLL*RLVLIL
Trigger: GAGAATAAGTACTAGCCTTCACAGTAATGAGCCTGG...AGACAAAATAAGCCACCCTGGTTCTCCTTCGCCACAAGCTCTCAGCCCAACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR TCA 90 bp ACTCTACCGGAAGGCAGAGGGAAATCTCCATGGTCTTGGGTGCTTAGAGACCCACAACAGGATAATTTTTaGGGAAACCAGGTCAGCACT +
Preference number: 4 (lower is better)
Translates to: TLPEGRGKSPWSWVLRDPQQDNF*GNQVST
Trigger: AGTGCTGACCTGGTTTCCTCAAAAATTATCCTGTTG...TGGGTCTCTAAGCACCCAAGACCATGGAGATTTCCCTCTGCCTTCCGGTAGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR TCA 90 bp CACACACACACACACAACACACACAACACAGAGTCTACACTAGGGAGTTCTCCGCCACATCGTGGAGAATaGGGTATTCATCCCTCAACT +
Preference number: 4 (lower is better)
Translates to: HTHTHNTHNTESTLGSSPPHRGE*GIHPST
Trigger: AGTTGAGGGATGAATACCTCATTCTCCACGATGTGG...CGGAGAACTCCCTAGTGTAGACTCTGTGTTGTGTGTGTTGTGTGTGTGTGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR TCA 90 bp CACACACACACACACAACACACACAACACAGAGTCTACACTAGGGAGTTCTCCGCTACAAACAGCCATGTaGGTGAGCTTCACAGCAGAT +
Preference number: 4 (lower is better)
Translates to: HTHTHNTHNTESTLGSSPLQTAM*VSFTAD
Trigger: ATCTGCTGTGAAGCTCACTCACATGGCTGTTTGTAG...CGGAGAACTCCCTAGTGTAGACTCTGTGTTGTGTGTGTTGTGTGTGTGTGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR TCA 90 bp ACCTGTAGTGAGACACCTAAGGGGTTTGTGCTCCCAGATTCCACGGCTCTGATTGACAGTACAATGTCTTaGATGGTGAGGAACTCTACC +
Preference number: 4 (lower is better)
Translates to: TCSETPKGFVLPDSTALIDSTMS*MVRNST
Trigger: GGTAGAGTTCCTCACCATTCAAGACATTGTACTGTC...AATCAGAGCCGTGGAATCTGGGAGCACAAACCCCTTAGGTGTCTCACTACAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR TCA 90 bp AGCCGGATATTTAAACCCACAACATTTGCCTTAGGGGTACGCAGTGTGTCCTCTTGCAGCAGCTTATTGTaGTGTTGGGCTGAGAGCTTG +
Preference number: 4 (lower is better)
Translates to: SRIFKPTTFALGVRSVSSCSSLL*CWAESL
Trigger: CAAGCTCTCAGCCCAACATCACAATAAGCTGCTGCA...AGAGGACACACTGCGTACCCCTAAGGCAAATGTTGTGGGTTTAAATATCCGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR TCA 90 bp GTCCAGGAGAACATTGTTAAGTCTGTAGAAATATCCAGTGCAGAGGAAAGGGCGAGCAGGAGGGTCACTTaGGACCAGAAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: VQENIVKSVEISSAEERASRRVT*DQKFKT
Trigger: GGTCTTGAACTTCTGGTCTCAAGTGACCCTCCTGCT...CGCCCTTTCCTCTGCACTGGATATTTCTACAGACTTAACAATGTTCTCCTGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR GCA 90 bp ACCTGTAGTGAGACACCTAAGGGGTTTGTGCTCCCAGATTCCACGGCTCTGATTCTTAGGCCATTGTCCTaGAAGAACCTAAACCCTACA +
Preference number: 4 (lower is better)
Translates to: TCSETPKGFVLPDSTALILRPLS*KNLNPT
Trigger: TGTAGGGTTTAGGTTCTTGCAGGACAATGGCCTAAG...AATCAGAGCCGTGGAATCTGGGAGCACAAACCCCTTAGGTGTCTCACTACAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR GCA 90 bp GTCCAGGAGAACATTGTTAAGTCTGTAGAAATATCCAGTGCAGAGGAAAGGGCGTGTCCCTTGCTTCCCTaGACTGACAGAACTCAGCTG +
Preference number: 4 (lower is better)
Translates to: VQENIVKSVEISSAEERACPLLP*TDRTQL
Trigger: CAGCTGAGTTCTGTCAGTGCAGGGAAGCAAGGGACA...CGCCCTTTCCTCTGCACTGGATATTTCTACAGACTTAACAATGTTCTCCTGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR CCA 90 bp TGTGGGCTTATAGGGCTTGTATTTCAAAGGGATAGCATGTCAGACTCATTCTGGGGCCCTGATTTGTCATaGACAAGAGTCGGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: CGLIGLVFQRDSMSDSFWGPDLS*TRVGPA
Trigger: AGCAGGGCCGACTCTTGTCCATGACAAATCAGGGCC...CCAGAATGAGTCTGACATGCTATCCCTTTGAAATACAAGCCCTATAAGCCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR CCA 90 bp CACACACACACACACAACACACACAACACAGAGTCTACACTAGGGAGTTCTCCGACCATAATATCTGGCTaGGCATGGTGGTCTGTACCT +
Preference number: 4 (lower is better)
Translates to: HTHTHNTHNTESTLGSSPTIISG*AWWSVP
Trigger: AGGTACAGACCACCATGCCCAGCCAGATATTATGGT...CGGAGAACTCCCTAGTGTAGACTCTGTGTTGTGTGTGTTGTGTGTGTGTGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR TCA 90 bp ACTCTACCGGAAGGCAGAGGGAAATCTCCATGGTCTTGGGTGCTTAGAGACCCATTACTAGGAACCATTTaGCCCAACCAGCTTTCAAAT +
Preference number: 4 (lower is better)
Translates to: TLPEGRGKSPWSWVLRDPLLGTI*PNQLSN
Trigger: ATTTGAAAGCTGGTTGGGTCAAATGGTTCCTAGTAA...TGGGTCTCTAAGCACCCAAGACCATGGAGATTTCCCTCTGCCTTCCGGTAGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR TCA 90 bp ACAAACAGCCATGTGAGTGAGCTTCACAGCAGATCCTCTCCAGTCAGTCCACGAGCAACCTCTGCCACCTaGGTTTTATTTCAAAGACAA +
Preference number: 4 (lower is better)
Translates to: TNSHVSELHSRSSPVSPRATSAT*VLFQRQ
Trigger: TTGTCTTTGAAATAAAACTCAGGTGGCAGAGGTTGC...TCGTGGACTGACTGGAGAGGATCTGCTGTGAAGCTCACTCACATGGCTGTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR TCA 90 bp TGTGGGCTTATAGGGCTTGTATTTCAAAGGGATAGCATGTCAGACTCATTCTGGCTTGCTTCCCTGCACTaGCAGAACTCAGCTGGCATA +
Preference number: 4 (lower is better)
Translates to: CGLIGLVFQRDSMSDSFWLASLH*QNSAGI
Trigger: TATGCCAGCTGAGTTCTGTCAGTGCAGGGAAGCAAG...CCAGAATGAGTCTGACATGCTATCCCTTTGAAATACAAGCCCTATAAGCCCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR TCA 90 bp GTCCAGGAGAACATTGTTAAGTCTGTAGAAATATCCAGTGCAGAGGAAAGGGCGCAATGTCTTGAATGGTaGGGAACTCTACCGGAAGGC +
Preference number: 4 (lower is better)
Translates to: VQENIVKSVEISSAEERAQCLEW*GTLPEG
Trigger: GCCTTCCGGTAGAGTTCCTCACCATTCAAGACATTG...CGCCCTTTCCTCTGCACTGGATATTTCTACAGACTTAACAATGTTCTCCTGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR GCA 90 bp CACACACACACACACAACACACACAACACAGAGTCTACACTAGGGAGTTCTCCGGCTCACTGCAACCTCTaGCACCTGAGTTTTATTTCA +
Preference number: 4 (lower is better)
Translates to: HTHTHNTHNTESTLGSSPAHCNL*HLSFIS
Trigger: TGAAATAAAACTCAGGTGGCAGAGGTTGCAGTGAGC...CGGAGAACTCCCTAGTGTAGACTCTGTGTTGTGTGTGTTGTGTGTGTGTGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR CCA 90 bp AGCCGGATATTTAAACCCACAACATTTGCCTTAGGGGTACGCAGTGTGTCCTCTGAGTTGGAACAAGATTaGCCCTGCCTAACATCACCT +
Preference number: 4 (lower is better)
Translates to: SRIFKPTTFALGVRSVSSELEQD*PCLTSP
Trigger: AGGTGATGTTAGGCAGGGCCAATCTTGTTCCAACTC...AGAGGACACACTGCGTACCCCTAAGGCAAATGTTGTGGGTTTAAATATCCGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR TCA 90 bp ACCTGTAGTGAGACACCTAAGGGGTTTGTGCTCCCAGATTCCACGGCTCTGATTTCTGATGGTTATCACTaGAGTTTTCTCTTCTACACG +
Preference number: 4 (lower is better)
Translates to: TCSETPKGFVLPDSTALISDGYH*SFLFYT
Trigger: CGTGTAGAAGAGAAAACTTCAGTGATAACCATCAGA...AATCAGAGCCGTGGAATCTGGGAGCACAAACCCCTTAGGTGTCTCACTACAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR TCA 90 bp GATGTTGGGCTGAGAGCTTGTGGCGAAGGAGAACCAGGGTGGCTTATTTTGTCTTCTGATGGTTATCACTaGAGTTTTCTCTTCTACACG +
Preference number: 4 (lower is better)
Translates to: DVGLRACGEGEPGWLILSSDGYH*SFLFYT
Trigger: CGTGTAGAAGAGAAAACTTCAGTGATAACCATCAGA...AGACAAAATAAGCCACCCTGGTTCTCCTTCGCCACAAGCTCTCAGCCCAACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR GCA 90 bp GTCCAGGAGAACATTGTTAAGTCTGTAGAAATATCCAGTGCAGAGGAAAGGGCGGAACAAGATTGGCCCTaGCTAACATCACCTGTAGTG +
Preference number: 4 (lower is better)
Translates to: VQENIVKSVEISSAEERAEQDWP*LTSPVV
Trigger: CACTACAGGTGATGTTAGGCAGGGCCAATCTTGTTC...CGCCCTTTCCTCTGCACTGGATATTTCTACAGACTTAACAATGTTCTCCTGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR GCA 90 bp ACTCTACCGGAAGGCAGAGGGAAATCTCCATGGTCTTGGGTGCTTAGAGACCCATTCTCATGGAAGGCCTaGTTCTTCTTTATTTACATG +
Preference number: 4 (lower is better)
Translates to: TLPEGRGKSPWSWVLRDPFSWKA*FFFIYM
Trigger: CATGTAAATAAAGAAGAAGCAGGCCTTCCATGAGAA...TGGGTCTCTAAGCACCCAAGACCATGGAGATTTCCCTCTGCCTTCCGGTAGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR GCA 90 bp ACCTGTAGTGAGACACCTAAGGGGTTTGTGCTCCCAGATTCCACGGCTCTGATTGTTACCAAGTTAGGCTaGAAAGATCAGCAGTTTCTA +
Preference number: 4 (lower is better)
Translates to: TCSETPKGFVLPDSTALIVTKLG*KDQQFL
Trigger: TAGAAACTGCTGATCTTTGCAGCCTAACTTGGTAAC...AATCAGAGCCGTGGAATCTGGGAGCACAAACCCCTTAGGTGTCTCACTACAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR GCA 90 bp TGTGGGCTTATAGGGCTTGTATTTCAAAGGGATAGCATGTCAGACTCATTCTGGGGCGACATGTCCATGTaGCAGTTCTACAGCATGGAA +
Preference number: 4 (lower is better)
Translates to: CGLIGLVFQRDSMSDSFWGDMSM*QFYSME
Trigger: TTCCATGCTGTAGAACTGGCACATGGACATGTCGCC...CCAGAATGAGTCTGACATGCTATCCCTTTGAAATACAAGCCCTATAAGCCCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR GCA 90 bp AGCCGGATATTTAAACCCACAACATTTGCCTTAGGGGTACGCAGTGTGTCCTCTGCAACAATCAGAAGCTaGTGGGAACACTTGCTGAAT +
Preference number: 4 (lower is better)
Translates to: SRIFKPTTFALGVRSVSSATIRS*WEHLLN
Trigger: ATTCAGCAAGTGTTCCCAGCAGCTTCTGATTGTTGC...AGAGGACACACTGCGTACCCCTAAGGCAAATGTTGTGGGTTTAAATATCCGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR CCA 90 bp TGTGGGCTTATAGGGCTTGTATTTCAAAGGGATAGCATGTCAGACTCATTCTGGCCGGAAATCAAGAGTTaGAACAAGATTGGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: CGLIGLVFQRDSMSDSFWPEIKS*NKIGPA
Trigger: GGCAGGGCCAATCTTGTTCCAACTCTTGATTTCCGG...CCAGAATGAGTCTGACATGCTATCCCTTTGAAATACAAGCCCTATAAGCCCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR CCA 90 bp GTCCAGGAGAACATTGTTAAGTCTGTAGAAATATCCAGTGCAGAGGAAAGGGCGACTGTCTCTGAAACTTaGTGGTGGGAACTCAGAGGA +
Preference number: 4 (lower is better)
Translates to: VQENIVKSVEISSAEERATVSET*WWELRG
Trigger: TCCTCTGAGTTCCCACCACCAAGTTTCAGAGACAGT...CGCCCTTTCCTCTGCACTGGATATTTCTACAGACTTAACAATGTTCTCCTGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR CCA 90 bp ACTCTACCGGAAGGCAGAGGGAAATCTCCATGGTCTTGGGTGCTTAGAGACCCAACATGGTTCATTCAATaGATTTGCAGATATGACTCC +
Preference number: 4 (lower is better)
Translates to: TLPEGRGKSPWSWVLRDPTWFIQ*ICRYDS
Trigger: GGAGTCATATCTGCAAATCCATTGAATGAACCATGT...TGGGTCTCTAAGCACCCAAGACCATGGAGATTTCCCTCTGCCTTCCGGTAGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR CCA 90 bp AGCCGGATATTTAAACCCACAACATTTGCCTTAGGGGTACGCAGTGTGTCCTCTAAGAACCATAATATCTaGCTGGGCATGGTGGTCTGT +
Preference number: 4 (lower is better)
Translates to: SRIFKPTTFALGVRSVSSKNHNI*LGMVVC
Trigger: ACAGACCACCATGCCCAGCCAGATATTATGGTTCTT...AGAGGACACACTGCGTACCCCTAAGGCAAATGTTGTGGGTTTAAATATCCGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
3UTR CAA 72 bp AATACAATGGCCCGGAAATCAAGAGTTGGAACAAGATaGGCCCTGCCTAACATCACCTGTAGTGAGACACCT +
Preference number: 4 (lower is better)
Translates to: NTMARKSRVGTR*ALPNITCSETP
Trigger: AGGTGTCTCACTACAGGTGATGTTAGGCAGGGCCAATCTTGTTCCAACTCTTGATTTCCGGGCCATTGTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR TCA 90 bp CACACACACACACACAACACACACAACACAGAGTCTACACTAGGGAGTTCTCCGTTACTAGGAACCATTTaGCCCAACCAGCTTTCAAAT +
Preference number: 4 (lower is better)
Translates to: HTHTHNTHNTESTLGSSPLLGTI*PNQLSN
Trigger: ATTTGAAAGCTGGTTGGGTCAAATGGTTCCTAGTAA...CGGAGAACTCCCTAGTGTAGACTCTGTGTTGTGTGTGTTGTGTGTGTGTGTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR TCA 90 bp TGTGGGCTTATAGGGCTTGTATTTCAAAGGGATAGCATGTCAGACTCATTCTGGCCACATCGTGGAGAATaGGGTATTCATCCCTCAACT +
Preference number: 4 (lower is better)
Translates to: CGLIGLVFQRDSMSDSFWPHRGE*GIHPST
Trigger: AGTTGAGGGATGAATACCTCATTCTCCACGATGTGG...CCAGAATGAGTCTGACATGCTATCCCTTTGAAATACAAGCCCTATAAGCCCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR TCA 90 bp AGCCGGATATTTAAACCCACAACATTTGCCTTAGGGGTACGCAGTGTGTCCTCTTACAGGAATGCAATGTaGAATAACCACATCGTGGAG +
Preference number: 4 (lower is better)
Translates to: SRIFKPTTFALGVRSVSSYRNAM*NNHIVE
Trigger: CTCCACGATGTGGTTATTTCACATTGCATTCCTGTA...AGAGGACACACTGCGTACCCCTAAGGCAAATGTTGTGGGTTTAAATATCCGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR TCA 90 bp CACACACACACACACAACACACACAACACAGAGTCTACACTAGGGAGTTCTCCGAAAGAATTTACTAGGTaGTCTCACACACACACACAC +
Preference number: 4 (lower is better)
Translates to: HTHTHNTHNTESTLGSSPKEFTR*SHTHTH
Trigger: GTGTGTGTGTGTGTGAGATCACCTAGTAAATTCTTT...CGGAGAACTCCCTAGTGTAGACTCTGTGTTGTGTGTGTTGTGTGTGTGTGTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR GCA 90 bp GGTGCAACATATTCTTCTCATGGAAGGCCTGCTTCTTCTTTATTTACATGGTTCCTCCATGGTCTTGGGTaGTTAGAGACCCATGTCCTG +
Preference number: 4 (lower is better)
Translates to: GATYSSHGRPASSLFTWFLHGLG*LETHVL
Trigger: CAGGACATGGGTCTCTAAGCACCCAAGACCATGGAG...GAACCATGTAAATAAAGAAGAAGCAGGCCTTCCATGAGAAGAATATGTTGCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR GCA 90 bp CACACACACACACACAACACACACAACACAGAGTCTACACTAGGGAGTTCTCCGCTTGCTGAATTTAGGTaGAGAATTGCAGCAGCTTAT +
Preference number: 4 (lower is better)
Translates to: HTHTHNTHNTESTLGSSPLAEFR*RIAAAY
Trigger: ATAAGCTGCTGCAATTCTGCACCTAAATTCAGCAAG...CGGAGAACTCCCTAGTGTAGACTCTGTGTTGTGTGTGTTGTGTGTGTGTGTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR CCA 90 bp TGTGGGCTTATAGGGCTTGTATTTCAAAGGGATAGCATGTCAGACTCATTCTGGAGTGAGAACAGAAGGTaGGAGACACTGGTTTCTGTG +
Preference number: 4 (lower is better)
Translates to: CGLIGLVFQRDSMSDSFWSENRR*ETLVSV
Trigger: CACAGAAACCAGTGTCTCCCACCTTCTGTTCTCACT...CCAGAATGAGTCTGACATGCTATCCCTTTGAAATACAAGCCCTATAAGCCCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR CCA 90 bp TGTGGGCTTATAGGGCTTGTATTTCAAAGGGATAGCATGTCAGACTCATTCTGGATTAAAGACGGGCCCTaGATTCCAAGGAGTGAGAAC +
Preference number: 4 (lower is better)
Translates to: CGLIGLVFQRDSMSDSFWIKDGP*IPRSEN
Trigger: GTTCTCACTCCTTGGAATCCAGGGCCCGTCTTTAAT...CCAGAATGAGTCTGACATGCTATCCCTTTGAAATACAAGCCCTATAAGCCCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR TCA 90 bp CACACACACACACACAACACACACAACACAGAGTCTACACTAGGGAGTTCTCCGAGACACTGGTTTCTGTaGAAACTAAAGTACCATCAA +
Preference number: 4 (lower is better)
Translates to: HTHTHNTHNTESTLGSSPRHWFL*KLKYHQ
Trigger: TTGATGGTACTTTAGTTTTCACAGAAACCAGTGTCT...CGGAGAACTCCCTAGTGTAGACTCTGTGTTGTGTGTGTTGTGTGTGTGTGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR GCA 90 bp GATGTTGGGCTGAGAGCTTGTGGCGAAGGAGAACCAGGGTGGCTTATTTTGTCTTTCATTCAATGGATTTaGAGATATGACTCCCATTTC +
Preference number: 4 (lower is better)
Translates to: DVGLRACGEGEPGWLILSFIQWI*RYDSHF
Trigger: GAAATGGGAGTCATATCTGCAAATCCATTGAATGAA...AGACAAAATAAGCCACCCTGGTTCTCCTTCGCCACAAGCTCTCAGCCCAACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR CCA 90 bp GGTGCAACATATTCTTCTCATGGAAGGCCTGCTTCTTCTTTATTTACATGGTTCAATGAAAGTAGTGGCTaGGTGTGGTGGGTCATGCCT +
Preference number: 4 (lower is better)
Translates to: GATYSSHGRPASSLFTWFNESSG*VWWVMP
Trigger: AGGCATGACCCACCACACCCAGCCACTACTTTCATT...GAACCATGTAAATAAAGAAGAAGCAGGCCTTCCATGAGAAGAATATGTTGCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR TCA 90 bp GGTGCAACATATTCTTCTCATGGAAGGCCTGCTTCTTCTTTATTTACATGGTTCAACCAGGTCAGCACTTaGTATTGGGAGTGCCATACA +
Preference number: 4 (lower is better)
Translates to: GATYSSHGRPASSLFTWFNQVST*YWECHT
Trigger: TGTATGGCACTCCCAATATCAAGTGCTGACCTGGTT...GAACCATGTAAATAAAGAAGAAGCAGGCCTTCCATGAGAAGAATATGTTGCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR TCA 90 bp TGTGGGCTTATAGGGCTTGTATTTCAAAGGGATAGCATGTCAGACTCATTCTGGGCAACCTCTGCCACCTaGGTTTTATTTCAAAGACAA +
Preference number: 4 (lower is better)
Translates to: CGLIGLVFQRDSMSDSFWATSAT*VLFQRQ
Trigger: TTGTCTTTGAAATAAAACTCAGGTGGCAGAGGTTGC...CCAGAATGAGTCTGACATGCTATCCCTTTGAAATACAAGCCCTATAAGCCCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR GCA 90 bp AGCCGGATATTTAAACCCACAACATTTGCCTTAGGGGTACGCAGTGTGTCCTCTCAGCAGTTTCTAACATaGCAACATAGATCAATCAGA +
Preference number: 4 (lower is better)
Translates to: SRIFKPTTFALGVRSVSSQQFLT*QHRSIR
Trigger: TCTGATTGATCTATGTTGGCATGTTAGAAACTGCTG...AGAGGACACACTGCGTACCCCTAAGGCAAATGTTGTGGGTTTAAATATCCGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR GCA 90 bp TGTGGGCTTATAGGGCTTGTATTTCAAAGGGATAGCATGTCAGACTCATTCTGGTGGCTGACATCTGATTaGAGTCTTGTTAGATATGGG +
Preference number: 4 (lower is better)
Translates to: CGLIGLVFQRDSMSDSFWWLTSD*SLVRYG
Trigger: CCCATATCTAACAAGACTGCAATCAGATGTCAGCCA...CCAGAATGAGTCTGACATGCTATCCCTTTGAAATACAAGCCCTATAAGCCCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR CCA 90 bp ACATATTCTTCTCATGGAAGGCCTGCTTCTTCTTTATTTACATGGTTCATTCAACCCACCAGCCCTCACTaGGTCACACTAACTCTGATG +
Preference number: 4 (lower is better)
Translates to: TYSSHGRPASSLFTWFIQPTSPH*VTLTLM
Trigger: CATCAGAGTTAGTGTGACCCAGTGAGGGCTGGTGGG...TTGAATGAACCATGTAAATAAAGAAGAAGCAGGCCTTCCATGAGAAGAATATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR CCA 90 bp GGTGCAACATATTCTTCTCATGGAAGGCCTGCTTCTTCTTTATTTACATGGTTCGAGTTGGAACAAGATTaGCCCTGCCTAACATCACCT +
Preference number: 4 (lower is better)
Translates to: GATYSSHGRPASSLFTWFELEQD*PCLTSP
Trigger: AGGTGATGTTAGGCAGGGCCAATCTTGTTCCAACTC...GAACCATGTAAATAAAGAAGAAGCAGGCCTTCCATGAGAAGAATATGTTGCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR CCA 90 bp GGTGCAACATATTCTTCTCATGGAAGGCCTGCTTCTTCTTTATTTACATGGTTCAGAGGGAAATCTCCATaGTCTTGGGTGCTTAGAGAC +
Preference number: 4 (lower is better)
Translates to: GATYSSHGRPASSLFTWFRGKSP*SWVLRD
Trigger: GTCTCTAAGCACCCAAGACCATGGAGATTTCCCTCT...GAACCATGTAAATAAAGAAGAAGCAGGCCTTCCATGAGAAGAATATGTTGCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR TCA 90 bp GGTGCAACATATTCTTCTCATGGAAGGCCTGCTTCTTCTTTATTTACATGGTTCCCAGGCTCATTACTGTaGAGGCTAGTACTTATTCTC +
Preference number: 4 (lower is better)
Translates to: GATYSSHGRPASSLFTWFPGSLL*RLVLIL
Trigger: GAGAATAAGTACTAGCCTTCACAGTAATGAGCCTGG...GAACCATGTAAATAAAGAAGAAGCAGGCCTTCCATGAGAAGAATATGTTGCACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR TCA 90 bp ACATATTCTTCTCATGGAAGGCCTGCTTCTTCTTTATTTACATGGTTCATTCAAAGGGAGTTCTCCGCCTaGAGTGAGATGAGCTCTTTC +
Preference number: 4 (lower is better)
Translates to: TYSSHGRPASSLFTWFIQREFSA*SEMSSF
Trigger: GAAAGAGCTCATCTCACTTCAGGCGGAGAACTCCCT...TTGAATGAACCATGTAAATAAAGAAGAAGCAGGCCTTCCATGAGAAGAATATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR GCA 90 bp ACATATTCTTCTCATGGAAGGCCTGCTTCTTCTTTATTTACATGGTTCATTCAACAGGCTGGATTGCAGTaGCACGATCACAGCTCACTA +
Preference number: 4 (lower is better)
Translates to: TYSSHGRPASSLFTWFIQQAGLQ*HDHSSL
Trigger: TAGTGAGCTGTGATCGTGGCACTGCAATCCAGCCTG...TTGAATGAACCATGTAAATAAAGAAGAAGCAGGCCTTCCATGAGAAGAATATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR GCA 90 bp GTCCAGGAGAACATTGTTAAGTCTGTAGAAATATCCAGTGCAGAGGAAAGGGCGTTCTCATGGAAGGCCTaGTTCTTCTTTATTTACATG +
Preference number: 4 (lower is better)
Translates to: VQENIVKSVEISSAEERAFSWKA*FFFIYM
Trigger: CATGTAAATAAAGAAGAAGCAGGCCTTCCATGAGAA...CGCCCTTTCCTCTGCACTGGATATTTCTACAGACTTAACAATGTTCTCCTGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR GCA 90 bp ACATATTCTTCTCATGGAAGGCCTGCTTCTTCTTTATTTACATGGTTCATTCAATGTCCCTTGCTTCCCTaGACTGACAGAACTCAGCTG +
Preference number: 4 (lower is better)
Translates to: TYSSHGRPASSLFTWFIQCPLLP*TDRTQL
Trigger: CAGCTGAGTTCTGTCAGTGCAGGGAAGCAAGGGACA...TTGAATGAACCATGTAAATAAAGAAGAAGCAGGCCTTCCATGAGAAGAATATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR GCA 90 bp ACATATTCTTCTCATGGAAGGCCTGCTTCTTCTTTATTTACATGGTTCATTCAACTCCATGGTCTTGGGTaGTTAGAGACCCATGTCCTG +
Preference number: 4 (lower is better)
Translates to: TYSSHGRPASSLFTWFIQLHGLG*LETHVL
Trigger: CAGGACATGGGTCTCTAAGCACCCAAGACCATGGAG...TTGAATGAACCATGTAAATAAAGAAGAAGCAGGCCTTCCATGAGAAGAATATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR CCA 90 bp GTCCAGGAGAACATTGTTAAGTCTGTAGAAATATCCAGTGCAGAGGAAAGGGCGACATGGTTCATTCAATaGATTTGCAGATATGACTCC +
Preference number: 4 (lower is better)
Translates to: VQENIVKSVEISSAEERATWFIQ*ICRYDS
Trigger: GGAGTCATATCTGCAAATCCATTGAATGAACCATGT...CGCCCTTTCCTCTGCACTGGATATTTCTACAGACTTAACAATGTTCTCCTGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR TCA 90 bp ACATATTCTTCTCATGGAAGGCCTGCTTCTTCTTTATTTACATGGTTCATTCAAGTTCTCCGCCTGAAGTaGGATGAGCTCTTTCTTGAT +
Preference number: 4 (lower is better)
Translates to: TYSSHGRPASSLFTWFIQVLRLK*DELFLD
Trigger: ATCAAGAAAGAGCTCATCTCACTTCAGGCGGAGAAC...TTGAATGAACCATGTAAATAAAGAAGAAGCAGGCCTTCCATGAGAAGAATATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR TCA 90 bp GGTGCAACATATTCTTCTCATGGAAGGCCTGCTTCTTCTTTATTTACATGGTTCAAAGAATTTACTAGGTaGTCTCACACACACACACAC +
Preference number: 4 (lower is better)
Translates to: GATYSSHGRPASSLFTWFKEFTR*SHTHTH
Trigger: GTGTGTGTGTGTGTGAGATCACCTAGTAAATTCTTT...GAACCATGTAAATAAAGAAGAAGCAGGCCTTCCATGAGAAGAATATGTTGCACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR GCA 90 bp TGTGGGCTTATAGGGCTTGTATTTCAAAGGGATAGCATGTCAGACTCATTCTGGTTCATTCAATGGATTTaGAGATATGACTCCCATTTC +
Preference number: 4 (lower is better)
Translates to: CGLIGLVFQRDSMSDSFWFIQWI*RYDSHF
Trigger: GAAATGGGAGTCATATCTGCAAATCCATTGAATGAA...CCAGAATGAGTCTGACATGCTATCCCTTTGAAATACAAGCCCTATAAGCCCACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR GCA 90 bp GGTGCAACATATTCTTCTCATGGAAGGCCTGCTTCTTCTTTATTTACATGGTTCGTTACCAAGTTAGGCTaGAAAGATCAGCAGTTTCTA +
Preference number: 4 (lower is better)
Translates to: GATYSSHGRPASSLFTWFVTKLG*KDQQFL
Trigger: TAGAAACTGCTGATCTTTGCAGCCTAACTTGGTAAC...GAACCATGTAAATAAAGAAGAAGCAGGCCTTCCATGAGAAGAATATGTTGCACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR GCA 90 bp GGTGCAACATATTCTTCTCATGGAAGGCCTGCTTCTTCTTTATTTACATGGTTCCTTGCTGAATTTAGGTaGAGAATTGCAGCAGCTTAT +
Preference number: 4 (lower is better)
Translates to: GATYSSHGRPASSLFTWFLAEFR*RIAAAY
Trigger: ATAAGCTGCTGCAATTCTGCACCTAAATTCAGCAAG...GAACCATGTAAATAAAGAAGAAGCAGGCCTTCCATGAGAAGAATATGTTGCACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR GCA 90 bp ACATATTCTTCTCATGGAAGGCCTGCTTCTTCTTTATTTACATGGTTCATTCAAGCAACAATCAGAAGCTaGTGGGAACACTTGCTGAAT +
Preference number: 4 (lower is better)
Translates to: TYSSHGRPASSLFTWFIQATIRS*WEHLLN
Trigger: ATTCAGCAAGTGTTCCCAGCAGCTTCTGATTGTTGC...TTGAATGAACCATGTAAATAAAGAAGAAGCAGGCCTTCCATGAGAAGAATATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR CCA 90 bp GGTGCAACATATTCTTCTCATGGAAGGCCTGCTTCTTCTTTATTTACATGGTTCAACATATTCTTCTCATaGAAGGCCTGCTTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: GATYSSHGRPASSLFTWFNIFFS*KACFFF
Trigger: AAAGAAGAAGCAGGCCTTCCATGAGAAGAATATGTT...GAACCATGTAAATAAAGAAGAAGCAGGCCTTCCATGAGAAGAATATGTTGCACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR TCA 90 bp ACATATTCTTCTCATGGAAGGCCTGCTTCTTCTTTATTTACATGGTTCATTCAATACAGGAATGCAATGTaGAATAACCACATCGTGGAG +
Preference number: 4 (lower is better)
Translates to: TYSSHGRPASSLFTWFIQYRNAM*NNHIVE
Trigger: CTCCACGATGTGGTTATTTCACATTGCATTCCTGTA...TTGAATGAACCATGTAAATAAAGAAGAAGCAGGCCTTCCATGAGAAGAATATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR CAA 90 bp TGGTGGCGTGCGCCTGTAATCCCAGCGCCACTGTGCTCTAGCCTGGGCGACAGAGTCACCCAGGCTGGATaGCAGTGCCACGATCACAGC +
Preference number: 5 (lower is better)
Translates to: WWRAPVIPAPLCSSLGDRVTQAG*QCHDHS
Trigger: GCTGTGATCGTGGCACTGCAATCCAGCCTGGGTGAC...TCTGTCGCCCAGGCTAGAGCACAGTGGCGCTGGGATTACAGGCGCACGCCACCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR CAA 90 bp TGGTGGCGTGCGCCTGTAATCCCAGCGCCACTGTGCTCTAGCCTGGGCGACAGATGTTGGGCTGAGAGCTaGTGGCGAAGGAGAACCAGG +
Preference number: 5 (lower is better)
Translates to: WWRAPVIPAPLCSSLGDRCWAES*WRRRTR
Trigger: CCTGGTTCTCCTTCGCCACAAGCTCTCAGCCCAACA...TCTGTCGCCCAGGCTAGAGCACAGTGGCGCTGGGATTACAGGCGCACGCCACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR CAA 90 bp TGGTGGCGTGCGCCTGTAATCCCAGCGCCACTGTGCTCTAGCCTGGGCGACAGAGGGCAAAGTGTCAGATaGTTAGGATATACTCTACCT +
Preference number: 5 (lower is better)
Translates to: WWRAPVIPAPLCSSLGDRGQSVR*LGYTLP
Trigger: AGGTAGAGTATATCCTAACAATCTGACACTTTGCCC...TCTGTCGCCCAGGCTAGAGCACAGTGGCGCTGGGATTACAGGCGCACGCCACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR CAA 90 bp ACAAACAGCCATGTGAGTGAGCTTCACAGCAGATCCTCTCCAGTCAGTCCACGAGTCACCCAGGCTGGATaGCAGTGCCACGATCACAGC +
Preference number: 5 (lower is better)
Translates to: TNSHVSELHSRSSPVSPRVTQAG*QCHDHS
Trigger: GCTGTGATCGTGGCACTGCAATCCAGCCTGGGTGAC...TCGTGGACTGACTGGAGAGGATCTGCTGTGAAGCTCACTCACATGGCTGTTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR CAA 90 bp CACACACACACACACAACACACACAACACAGAGTCTACACTAGGGAGTTCTCCGCTGTTGCTCTGTCCCTaGCTTCCCTGCACTGACAGA +
Preference number: 5 (lower is better)
Translates to: HTHTHNTHNTESTLGSSPLLLCP*LPCTDR
Trigger: TCTGTCAGTGCAGGGAAGCAAGGGACAGAGCAACAG...CGGAGAACTCCCTAGTGTAGACTCTGTGTTGTGTGTGTTGTGTGTGTGTGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR CAA 90 bp ATCACCTGTAGTGAGACACCTAAGGGGTTTGTGCTCCCAGATTCCACGGCTCTGCCAGGGTGGCTTATTTaGTCTGAAGGTCCAGGAGAA +
Preference number: 5 (lower is better)
Translates to: ITCSETPKGFVLPDSTALPGWLI*SEGPGE
Trigger: TTCTCCTGGACCTTCAGACAAAATAAGCCACCCTGG...CAGAGCCGTGGAATCTGGGAGCACAAACCCCTTAGGTGTCTCACTACAGGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR CAA 90 bp GATGTTGGGCTGAGAGCTTGTGGCGAAGGAGAACCAGGGTGGCTTATTTTGTCTAGAGTTGGAACAAGATaGGCCCTGCCTAACATCACC +
Preference number: 5 (lower is better)
Translates to: DVGLRACGEGEPGWLILSRVGTR*ALPNIT
Trigger: GGTGATGTTAGGCAGGGCCAATCTTGTTCCAACTCT...AGACAAAATAAGCCACCCTGGTTCTCCTTCGCCACAAGCTCTCAGCCCAACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR CAA 90 bp ACCTGTAGTGAGACACCTAAGGGGTTTGTGCTCCCAGATTCCACGGCTCTGATTCCAGGGTGGCTTATTTaGTCTGAAGGTCCAGGAGAA +
Preference number: 5 (lower is better)
Translates to: TCSETPKGFVLPDSTALIPGWLI*SEGPGE
Trigger: TTCTCCTGGACCTTCAGACAAAATAAGCCACCCTGG...AATCAGAGCCGTGGAATCTGGGAGCACAAACCCCTTAGGTGTCTCACTACAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR CAA 90 bp ATCACCTGTAGTGAGACACCTAAGGGGTTTGTGCTCCCAGATTCCACGGCTCTGAGCTGTTGTGTCTGCTaGAGCATAGTAGATCTTCCG +
Preference number: 5 (lower is better)
Translates to: ITCSETPKGFVLPDSTALSCCVC*SIVDLP
Trigger: CGGAAGATCTACTATGCTCAAGCAGACACAACAGCT...CAGAGCCGTGGAATCTGGGAGCACAAACCCCTTAGGTGTCTCACTACAGGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641244.1
CDS-3UTR CAA 90 bp CACACACACACACACAACACACACAACACAGAGTCTACACTAGGGAGTTCTCCGAAGCAGGAGGGTCACTaGAGACCAGAAGTTCAAGAC +
Preference number: 5 (lower is better)
Translates to: HTHTHNTHNTESTLGSSPKQEGH*RPEVQD
Trigger: GTCTTGAACTTCTGGTCTCAAGTGACCCTCCTGCTT...CGGAGAACTCCCTAGTGTAGACTCTGTGTTGTGTGTGTTGTGTGTGTGTGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR CAA 90 bp GATGTTGGGCTGAGAGCTTGTGGCGAAGGAGAACCAGGGTGGCTTATTTTGTCTTCTCAGTCTCCTCCTTaGAGAAATGCAGTGAATGAG +
Preference number: 5 (lower is better)
Translates to: DVGLRACGEGEPGWLILSSQSPP*RNAVNE
Trigger: CTCATTCACTGCATTTCTCAAAGGAGGAGACTGAGA...AGACAAAATAAGCCACCCTGGTTCTCCTTCGCCACAAGCTCTCAGCCCAACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR CAA 90 bp ACTCTACCGGAAGGCAGAGGGAAATCTCCATGGTCTTGGGTGCTTAGAGACCCAGGGCAAAGTGTCAGATaGTTAGGATATACTCTACCT +
Preference number: 5 (lower is better)
Translates to: TLPEGRGKSPWSWVLRDPGQSVR*LGYTLP
Trigger: AGGTAGAGTATATCCTAACAATCTGACACTTTGCCC...TGGGTCTCTAAGCACCCAAGACCATGGAGATTTCCCTCTGCCTTCCGGTAGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR CAA 90 bp TGTGGGCTTATAGGGCTTGTATTTCAAAGGGATAGCATGTCAGACTCATTCTGGCTGTTGCTCTGTCCCTaGCTTCCCTGCACTGACAGA +
Preference number: 5 (lower is better)
Translates to: CGLIGLVFQRDSMSDSFWLLLCP*LPCTDR
Trigger: TCTGTCAGTGCAGGGAAGCAAGGGACAGAGCAACAG...CCAGAATGAGTCTGACATGCTATCCCTTTGAAATACAAGCCCTATAAGCCCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR CAA 90 bp ATCACCTGTAGTGAGACACCTAAGGGGTTTGTGCTCCCAGATTCCACGGCTCTGATTACTAGGAACCATTaGACCCAACCAGCTTTCAAA +
Preference number: 5 (lower is better)
Translates to: ITCSETPKGFVLPDSTALITRNH*TQPAFK
Trigger: TTTGAAAGCTGGTTGGGTCAAATGGTTCCTAGTAAT...CAGAGCCGTGGAATCTGGGAGCACAAACCCCTTAGGTGTCTCACTACAGGTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR CAA 90 bp TGTGGGCTTATAGGGCTTGTATTTCAAAGGGATAGCATGTCAGACTCATTCTGGCCCGGAAATCAAGAGTaGGAACAAGATTGGCCCTGC +
Preference number: 5 (lower is better)
Translates to: CGLIGLVFQRDSMSDSFWPGNQE*EQDWPC
Trigger: GCAGGGCCAATCTTGTTCCAACTCTTGATTTCCGGG...CCAGAATGAGTCTGACATGCTATCCCTTTGAAATACAAGCCCTATAAGCCCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR CAA 90 bp GGTGCAACATATTCTTCTCATGGAAGGCCTGCTTCTTCTTTATTTACATGGTTCTGTTGGGCTGAGAGCTaGTGGCGAAGGAGAACCAGG +
Preference number: 5 (lower is better)
Translates to: GATYSSHGRPASSLFTWFCWAES*WRRRTR
Trigger: CCTGGTTCTCCTTCGCCACAAGCTCTCAGCCCAACA...GAACCATGTAAATAAAGAAGAAGCAGGCCTTCCATGAGAAGAATATGTTGCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR CAA 90 bp AGCCGGATATTTAAACCCACAACATTTGCCTTAGGGGTACGCAGTGTGTCCTCTTGTAGCTGTTGTGTCTaGAGCATAGTAGATCTTCCG +
Preference number: 5 (lower is better)
Translates to: SRIFKPTTFALGVRSVSSCSCCV*SIVDLP
Trigger: CGGAAGATCTACTATGCTCAAGACACAACAGCTACA...AGAGGACACACTGCGTACCCCTAAGGCAAATGTTGTGGGTTTAAATATCCGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641669.1
CDS-3UTR CAA 90 bp GTCCAGGAGAACATTGTTAAGTCTGTAGAAATATCCAGTGCAGAGGAAAGGGCGGGTCAGCACTTGATATaGGGAGTGCCATACACATCA +
Preference number: 5 (lower is better)
Translates to: VQENIVKSVEISSAEERAGQHLI*GVPYTS
Trigger: TGATGTGTATGGCACTCCCAATATCAAGTGCTGACC...CGCCCTTTCCTCTGCACTGGATATTTCTACAGACTTAACAATGTTCTCCTGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR CAA 90 bp ACAAACAGCCATGTGAGTGAGCTTCACAGCAGATCCTCTCCAGTCAGTCCACGAATTACTAGGAACCATTaGACCCAACCAGCTTTCAAA +
Preference number: 5 (lower is better)
Translates to: TNSHVSELHSRSSPVSPRITRNH*TQPAFK
Trigger: TTTGAAAGCTGGTTGGGTCAAATGGTTCCTAGTAAT...TCGTGGACTGACTGGAGAGGATCTGCTGTGAAGCTCACTCACATGGCTGTTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR CAA 90 bp GATGTTGGGCTGAGAGCTTGTGGCGAAGGAGAACCAGGGTGGCTTATTTTGTCTAATTTAGGTGCAGAATaGCAGCAGCTTATTGTGATG +
Preference number: 5 (lower is better)
Translates to: DVGLRACGEGEPGWLILSNLGAE*QQLIVM
Trigger: CATCACAATAAGCTGCTGCAATTCTGCACCTAAATT...AGACAAAATAAGCCACCCTGGTTCTCCTTCGCCACAAGCTCTCAGCCCAACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR CAA 90 bp GTCCAGGAGAACATTGTTAAGTCTGTAGAAATATCCAGTGCAGAGGAAAGGGCGAGCTGCTGGGAACACTaGCTGAATTTAGGTGCAGAA +
Preference number: 5 (lower is better)
Translates to: VQENIVKSVEISSAEERASCWEH*LNLGAE
Trigger: TTCTGCACCTAAATTCAGCAAGTGTTCCCAGCAGCT...CGCCCTTTCCTCTGCACTGGATATTTCTACAGACTTAACAATGTTCTCCTGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR CAA 90 bp AGCCGGATATTTAAACCCACAACATTTGCCTTAGGGGTACGCAGTGTGTCCTCTGAGATGAGCTCTTTCTaGATGAGCAACAATCAGAAG +
Preference number: 5 (lower is better)
Translates to: SRIFKPTTFALGVRSVSSEMSSF*MSNNQK
Trigger: CTTCTGATTGTTGCTCATCAAGAAAGAGCTCATCTC...AGAGGACACACTGCGTACCCCTAAGGCAAATGTTGTGGGTTTAAATATCCGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR CAA 90 bp GTCCAGGAGAACATTGTTAAGTCTGTAGAAATATCCAGTGCAGAGGAAAGGGCGGAGATGAGCTCTTTCTaGATGAGCAACAATCAGAAG +
Preference number: 5 (lower is better)
Translates to: VQENIVKSVEISSAEERAEMSSF*MSNNQK
Trigger: CTTCTGATTGTTGCTCATCAAGAAAGAGCTCATCTC...CGCCCTTTCCTCTGCACTGGATATTTCTACAGACTTAACAATGTTCTCCTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR CAA 90 bp GGTGCAACATATTCTTCTCATGGAAGGCCTGCTTCTTCTTTATTTACATGGTTCAAACCAGGTCAGCACTaGATATTGGGAGTGCCATAC +
Preference number: 5 (lower is better)
Translates to: GATYSSHGRPASSLFTWFKPGQH*ILGVPY
Trigger: GTATGGCACTCCCAATATCAAGTGCTGACCTGGTTT...GAACCATGTAAATAAAGAAGAAGCAGGCCTTCCATGAGAAGAATATGTTGCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR CAA 90 bp ACATATTCTTCTCATGGAAGGCCTGCTTCTTCTTTATTTACATGGTTCATTCAAAGACACCTAAGGGGTTaGTGCTCCCAGATTCCACGG +
Preference number: 5 (lower is better)
Translates to: TYSSHGRPASSLFTWFIQRHLRG*CSQIPR
Trigger: CCGTGGAATCTGGGAGCACAAACCCCTTAGGTGTCT...TTGAATGAACCATGTAAATAAAGAAGAAGCAGGCCTTCCATGAGAAGAATATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR CAA 90 bp ACATATTCTTCTCATGGAAGGCCTGCTTCTTCTTTATTTACATGGTTCATTCAAAGAGTTGGAACAAGATaGGCCCTGCCTAACATCACC +
Preference number: 5 (lower is better)
Translates to: TYSSHGRPASSLFTWFIQRVGTR*ALPNIT
Trigger: GGTGATGTTAGGCAGGGCCAATCTTGTTCCAACTCT...TTGAATGAACCATGTAAATAAAGAAGAAGCAGGCCTTCCATGAGAAGAATATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR CAA 90 bp ACATATTCTTCTCATGGAAGGCCTGCTTCTTCTTTATTTACATGGTTCATTCAAAAGCAGGAGGGTCACTaGAGACCAGAAGTTCAAGAC +
Preference number: 5 (lower is better)
Translates to: TYSSHGRPASSLFTWFIQKQEGH*RPEVQD
Trigger: GTCTTGAACTTCTGGTCTCAAGTGACCCTCCTGCTT...TTGAATGAACCATGTAAATAAAGAAGAAGCAGGCCTTCCATGAGAAGAATATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR CAA 90 bp ACATATTCTTCTCATGGAAGGCCTGCTTCTTCTTTATTTACATGGTTCATTCAAAAACCAGGTCAGCACTaGATATTGGGAGTGCCATAC +
Preference number: 5 (lower is better)
Translates to: TYSSHGRPASSLFTWFIQKPGQH*ILGVPY
Trigger: GTATGGCACTCCCAATATCAAGTGCTGACCTGGTTT...TTGAATGAACCATGTAAATAAAGAAGAAGCAGGCCTTCCATGAGAAGAATATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR CAA 90 bp GGTGCAACATATTCTTCTCATGGAAGGCCTGCTTCTTCTTTATTTACATGGTTCAATTTAGGTGCAGAATaGCAGCAGCTTATTGTGATG +
Preference number: 5 (lower is better)
Translates to: GATYSSHGRPASSLFTWFNLGAE*QQLIVM
Trigger: CATCACAATAAGCTGCTGCAATTCTGCACCTAAATT...GAACCATGTAAATAAAGAAGAAGCAGGCCTTCCATGAGAAGAATATGTTGCACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS-3UTR CAA 90 bp ACATATTCTTCTCATGGAAGGCCTGCTTCTTCTTTATTTACATGGTTCATTCAAAGCTGCTGGGAACACTaGCTGAATTTAGGTGCAGAA +
Preference number: 5 (lower is better)
Translates to: TYSSHGRPASSLFTWFIQSCWEH*LNLGAE
Trigger: TTCTGCACCTAAATTCAGCAAGTGTTCCCAGCAGCT...TTGAATGAACCATGTAAATAAAGAAGAAGCAGGCCTTCCATGAGAAGAATATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS GCA 90 bp TGGATGTACGAAATTCAACAGGAGACTAAAGTTTATAGGAAAGAGTaGAGGAGAGTTAGAGACTGTTCGGAAAATAACTTATTAAAGACG +
Preference number: 5 (lower is better)
Translates to: WMYEIQQETKVYRKE*RRVRDCSENNLLKT
Trigger: CGTCTTTAATAAGTTATTTTCCGAACAGTCTCTAACTCTCCTGCACTCTTTCCTATAAACTTTAGTCTCCTGTTGAATTTCGTACATCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS CCA 72 bp CTCTCCTCTTTTCCTTCTTACCCCACCAGCCCTCACTaGGTCACACTAACTCTGATGGTTATCACTGAAGTT +
Preference number: 6 (lower is better)
Translates to: LSSFPSYPTSPH*VTLTLMVITEV
Trigger: AACTTCAGTGATAACCATCAGAGTTAGTGTGACCCAGTGAGGGCTGGTGGGGTAAGAAGGAAAAGAGGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1
CDS GCA 72 bp GAAATTCAACAGGAGACTAAAGTTTATAGGAAAGAGTaGAGGAGAGTTAGAGACTGTTCGGAAAATAACTTA +
Preference number: 6 (lower is better)
Translates to: EIQQETKVYRKE*RRVRDCSENNL
Trigger: TAAGTTATTTTCCGAACAGTCTCTAACTCTCCTGCACTCTTTCCTATAAACTTTAGTCTCCTGTTGAATTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641244.1
ENST00000641669.1