RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OR7C1 (Homo sapiens)

Ensembl gene IDs: ENSG00000127530

Ensembl transcript IDs: ENST00000601611.6, ENST00000641666.1, ENST00000642000.1, ENST00000642030.1, ENST00000672931.1

Found 677 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCCTCCATGTTGAACATGACTGGTCCCCAGCTAGCCCTTTTCTATTaGCGCAGCAGCCGGCATTCACTCATGCAAGCTTCCAGCTTGCTT +
Preference number: 1 (lower is better)
Translates to: ASMLNMTGPQLALFY*RSSRHSLMQASSLL
Trigger: AAGCAAGCTGGAAGCTTGCATGAGTGAATGCCGGCTGCTGCGCCAATAGAAAAGGGCTAGCTGGGGACCAGTCATGTTCAACATGGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR TCA 90 bp ACCTGGGCAGCCCCATGTTGCCTGTTCCTTTGCTGTACACATGGTTaGCAAAGAAAAGGAAGAGGGAGCCTCCATGTTGAACATGACTGG +
Preference number: 1 (lower is better)
Translates to: TWAAPCCLFLCCTHG*QRKGRGSLHVEHDW
Trigger: CCAGTCATGTTCAACATGGAGGCTCCCTCTTCCTTTTCTTTGTCAACCATGTGTACAGCAAAGGAACAGGCAACATGGGGCTGCCCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR GCA 90 bp GCACATTGGCCTGGGGCTGCAGATTATTCAAGGAAGCATGCTCAGTaGTCATCAGTAAATGCCTGGAGTGTTGGGTGCATTCTTGTGTCT +
Preference number: 1 (lower is better)
Translates to: AHWPGAADYSRKHAQ*SSVNAWSVGCILVS
Trigger: AGACACAAGAATGCACCCAACACTCCAGGCATTTACTGATGAGCACTGAGCATGCTTCCTTGAATAATCTGCAGCCCCAGGCCAATGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR GCA 90 bp GACACATGCACATTGGCCTGGGGCTGCAGATTATTCAAGGAAGCATaGTCAGTGCTCATCAGTAAATGCCTGGAGTGTTGGGTGCATTCT +
Preference number: 1 (lower is better)
Translates to: DTCTLAWGCRLFKEA*SVLISKCLECWVHS
Trigger: AGAATGCACCCAACACTCCAGGCATTTACTGATGAGCACTGAGCATGCTTCCTTGAATAATCTGCAGCCCCAGGCCAATGTGCATGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR CCA 90 bp GCTAGGGGTAAGGCATGGAACAGAATCTTTCTCACAGCCTTCAAGTaGAACCAGCCCTGCCAACAACTTGATTTCAGGCGTCATAGTCTA +
Preference number: 1 (lower is better)
Translates to: ARGKAWNRIFLTAFK*NQPCQQLDFRRHSL
Trigger: TAGACTATGACGCCTGAAATCAAGTTGTTGGCAGGGCTGGTTCCACTTGAAGGCTGTGAGAAAGATTCTGTTCCATGCCTTACCCCTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR GCA 90 bp TCTATTGGCGCAGCAGCCGGCATTCACTCATGCAAGCTTCCAGCTTaGTTATCTATGTCTGCAGCTCGATTTTTCAGGCTGTTCTTTGTT +
Preference number: 1 (lower is better)
Translates to: SIGAAAGIHSCKLPA*LSMSAARFFRLFFV
Trigger: AACAAAGAACAGCCTGAAAAATCGAGCTGCAGACATAGATAAGCAAGCTGGAAGCTTGCATGAGTGAATGCCGGCTGCTGCGCCAATAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR GCA 90 bp TGTCTTGTGGCTTACAACACAGACACATGCACATTGGCCTGGGGCTaGAGATTATTCAAGGAAGCATGCTCAGTGCTCATCAGTAAATGC +
Preference number: 1 (lower is better)
Translates to: CLVAYNTDTCTLAWG*RLFKEACSVLISKC
Trigger: GCATTTACTGATGAGCACTGAGCATGCTTCCTTGAATAATCTGCAGCCCCAGGCCAATGTGCATGTGTCTGTGTTGTAAGCCACAAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR GCA 90 bp GCATGGAACAGAATCTTTCTCACAGCCTTCAAGTGGAACCAGCCCTaGCAACAACTTGATTTCAGGCGTCATAGTCTACAGAAATGTGAG +
Preference number: 1 (lower is better)
Translates to: AWNRIFLTAFKWNQP*QQLDFRRHSLQKCE
Trigger: CTCACATTTCTGTAGACTATGACGCCTGAAATCAAGTTGTTGGCAGGGCTGGTTCCACTTGAAGGCTGTGAGAAAGATTCTGTTCCATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR TCA 90 bp GGAAAAGAAGAGGCTAGAAGACGAAATCATGGAATGTTGCAGCACTaGGAACTTGAGAAGATGAGGAGGAGCCAATCTGGGTTTCAGCTT +
Preference number: 1 (lower is better)
Translates to: GKEEARRRNHGMLQH*ELEKMRRSQSGFQL
Trigger: AAGCTGAAACCCAGATTGGCTCCTCCTCATCTTCTCAAGTTCTCAGTGCTGCAACATTCCATGATTTCGTCTTCTAGCCTCTTCTTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR GCA 90 bp AGGAAGCATGCTCAGTGCTCATCAGTAAATGCCTGGAGTGTTGGGTaGATTCTTGTGTCTCACAATTTAGAAGCAGCAGTGATAGAACTG +
Preference number: 1 (lower is better)
Translates to: RKHAQCSSVNAWSVG*ILVSHNLEAAVIEL
Trigger: CAGTTCTATCACTGCTGCTTCTAAATTGTGAGACACAAGAATGCACCCAACACTCCAGGCATTTACTGATGAGCACTGAGCATGCTTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR GCA 90 bp GGCTGCAGATTATTCAAGGAAGCATGCTCAGTGCTCATCAGTAAATaGCTGGAGTGTTGGGTGCATTCTTGTGTCTCACAATTTAGAAGC +
Preference number: 1 (lower is better)
Translates to: GCRLFKEACSVLISK*LECWVHSCVSQFRS
Trigger: GCTTCTAAATTGTGAGACACAAGAATGCACCCAACACTCCAGGCATTTACTGATGAGCACTGAGCATGCTTCCTTGAATAATCTGCAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR CCA 90 bp GATTGGTTGGATCAGGTGTGCCATTTGCATAGCATGTGGAGAAGCTaGCTGCCCCACCCTAATCTTTTATTATACAGATGGGTTCTTTAC +
Preference number: 1 (lower is better)
Translates to: DWLDQVCHLHSMWRS*LPHPNLLLYRWVLY
Trigger: GTAAAGAACCCATCTGTATAATAAAAGATTAGGGTGGGGCAGCCAGCTTCTCCACATGCTATGCAAATGGCACACCTGATCCAACCAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR CCA 90 bp TGTTTAATATGTGTCTTGTGGCTTACAACACAGACACATGCACATTaGCCTGGGGCTGCAGATTATTCAAGGAAGCATGCTCAGTGCTCA +
Preference number: 1 (lower is better)
Translates to: CLICVLWLTTQTHAH*PGAADYSRKHAQCS
Trigger: TGAGCACTGAGCATGCTTCCTTGAATAATCTGCAGCCCCAGGCCAATGTGCATGTGTCTGTGTTGTAAGCCACAAGACACATATTAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR CCA 90 bp CCAATCTTAGGTTTTACAATAGTGATGTTGTCCCCAGAAGCAATTTaGGGAGGTTCAGAATCTTGCAGTCTCCAGCTGCGTGACTTTCTT +
Preference number: 1 (lower is better)
Translates to: PILGFTIVMLSPEAI*GGSESCSLQLRDFL
Trigger: AAGAAAGTCACGCAGCTGGAGACTGCAAGATTCTGAACCTCCCCAAATTGCTTCTGGGGACAACATCACTATTGTAAAACCTAAGATTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR CCA 90 bp TTCAAGGAAGCATGCTCAGTGCTCATCAGTAAATGCCTGGAGTGTTaGGTGCATTCTTGTGTCTCACAATTTAGAAGCAGCAGTGATAGA +
Preference number: 1 (lower is better)
Translates to: FKEACSVLISKCLEC*VHSCVSQFRSSSDR
Trigger: TCTATCACTGCTGCTTCTAAATTGTGAGACACAAGAATGCACCCAACACTCCAGGCATTTACTGATGAGCACTGAGCATGCTTCCTTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR TCA 90 bp TCAGTCTTTCCTGTTCTACATCACTCCCCTGGAAGACGACGGCACTaGATTAGCTTTAACATGTGCGTGATGGTGAATAATGACATAATC +
Preference number: 1 (lower is better)
Translates to: SVFPVLHHSPGRRRH*ISFNMCVMVNNDII
Trigger: GATTATGTCATTATTCACCATCACGCACATGTTAAAGCTAATTCAGTGCCGTCGTCTTCCAGGGGAGTGATGTAGAACAGGAAAGACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR CCA 90 bp TCCTACGAAGGCAGTCTAGTCTCCCAGCAGGAAGGGAATTGGTTTTaGGAAAGGGCTGTTACCGTCTTTGTTTCAAAGTTAAACTATAAA +
Preference number: 1 (lower is better)
Translates to: SYEGSLVSQQEGNWF*ERAVTVFVSKLNYK
Trigger: TTTATAGTTTAACTTTGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGAGACTAGACTGCCTTCGTAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR GCA 90 bp ATTTGGTCAGTGGGAGCCCAGAGGGAATATTATTTTAGGTGGAACTaGTCTGGATTTAGGTATCATGCCGAGGATGAAATAACGTTATCT +
Preference number: 1 (lower is better)
Translates to: IWSVGAQREYYFRWN*SGFRYHAEDEITLS
Trigger: AGATAACGTTATTTCATCCTCGGCATGATACCTAAATCCAGAGCAGTTCCACCTAAAATAATATTCCCTCTGGGCTCCCACTGACCAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR GCA 90 bp GTAGGTTTTCCAGGTCAGATGATTTCTGTGGCAGTTACTCATATCTaGTCTTGTAACATGAAAGCAGCCACAGATAATATGTACACAAGT +
Preference number: 1 (lower is better)
Translates to: VGFPGQMISVAVTHI*SCNMKAATDNMYTS
Trigger: ACTTGTGTACATATTATCTGTGGCTGCTTTCATGTTACAAGAGCAGATATGAGTAACTGCCACAGAAATCATCTGACCTGGAAAACCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR GCA 90 bp CTTGATTTCAGGCGTCATAGTCTACAGAAATGTGAGACAATCAATTaGTATTGTTTAACTCACCCAATTTGTGGCACATTGTTACAGATG +
Preference number: 1 (lower is better)
Translates to: LDFRRHSLQKCETIN*YCLTHPICGTLLQM
Trigger: CATCTGTAACAATGTGCCACAAATTGGGTGAGTTAAACAATAGCAATTGATTGTCTCACATTTCTGTAGACTATGACGCCTGAAATCAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR CCA 90 bp AGCTTTAACATGTGCGTGATGGTGAATAATGACATAATCTTACAATaGCGACTTCACATAAGGGTGTTACTCAAAATCTCTGTGAGACTT +
Preference number: 1 (lower is better)
Translates to: SFNMCVMVNNDIILQ*RLHIRVLLKISVRL
Trigger: AAGTCTCACAGAGATTTTGAGTAACACCCTTATGTGAAGTCGCCATTGTAAGATTATGTCATTATTCACCATCACGCACATGTTAAAGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR TCA 90 bp ATTAAGCTAAGTGAAAGAAGCCACTCACAAAGTCAAAATAGTGTATaGTTCCATTTATATACAATCGAGAGAGAGAGAGAGACAGAGAGA +
Preference number: 1 (lower is better)
Translates to: IKLSERSHSQSQNSV*FHLYTIERERETER
Trigger: TCTCTCTGTCTCTCTCTCTCTCTCGATTGTATATAAATGGAATCATACACTATTTTGACTTTGTGAGTGGCTTCTTTCACTTAGCTTAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR CAA 90 bp AGCCTCCATGTTGAACATGACTGGTCCCCAGCTAGCCCTTTTCTATaGGCGCAGCAGCCGGCATTCACTCATGCAAGCTTCCAGCTTGCT +
Preference number: 2 (lower is better)
Translates to: SLHVEHDWSPASPFL*AQQPAFTHASFQLA
Trigger: AGCAAGCTGGAAGCTTGCATGAGTGAATGCCGGCTGCTGCGCCAATAGAAAAGGGCTAGCTGGGGACCAGTCATGTTCAACATGGAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR TCA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCAGGTGGGAGAATGGCATaGACTCGGGAGGCGGAGCTT +
Preference number: 2 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSGGRMA*TREAEL
Trigger: AAGCTCCGCCTCCCGAGTTCATGCCATTCTCCCACC...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR TCA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCAGTTAGAGCCCAGGAATaGGCAAGGACAGCTTGGAGG +
Preference number: 2 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSVRAQE*ARTAWR
Trigger: CCTCCAAGCTGTCCTTGCTCATTCCTGGGCTCTAAC...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR CAA 90 bp TACAGATGGGTTCTTTACCTGGGCAGCCCCATGTTGCCTGTTCCTTaGCTGTACACATGGTTGACAAAGAAAAGGAAGAGGGAGCCTCCA +
Preference number: 2 (lower is better)
Translates to: YRWVLYLGSPMLPVP*LYTWLTKKRKREPP
Trigger: TGGAGGCTCCCTCTTCCTTTTCTTTGTCAACCATGTGTACAGCAAAGGAACAGGCAACATGGGGCTGCCCAGGTAAAGAACCCATCTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR GCA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCATGGGCAGCCCCATGTTaGCTGTTCCTTTGCTGTACA +
Preference number: 2 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSWAAPC*LFLCCT
Trigger: TGTACAGCAAAGGAACAGGCAACATGGGGCTGCCCA...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR GCA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCAGAGAAGAGCTCTATGTaGAGAGAGGGGTCCCAGAGA +
Preference number: 2 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSEKSSM*REGSQR
Trigger: TCTCTGGGACCCCTCTCTGCACATAGAGCTCTTCTC...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CCA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCACATTTGCATAGCATGTaGAGAAGCTGGCTGCCCCAC +
Preference number: 2 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSHLHSM*RSWLPH
Trigger: GTGGGGCAGCCAGCTTCTCCACATGCTATGCAAATG...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CCA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCACTCACAGCCTTCAAGTaGAACCAGCCCTGCCAACAA +
Preference number: 2 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSLTAFK*NQPCQQ
Trigger: TTGTTGGCAGGGCTGGTTCCACTTGAAGGCTGTGAG...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CCA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCACACTGCACTCTAGCCTaGGTGAGAAAGCAAGACTCC +
Preference number: 2 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSHCTLA*VRKQDS
Trigger: GGAGTCTTGCTTTCTCACCCAGGCTAGAGTGCAGTG...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CCA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCATTCGGGAGGTTGAGGTaGGAGAATGGCATGAACTCG +
Preference number: 2 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSFGRLR*ENGMNS
Trigger: CGAGTTCATGCCATTCTCCCACCTCAACCTCCCGAA...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR TCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAAGATCTCCTCACCTTGTaGTCCACCCGCCTCGGCCTC +
Preference number: 2 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQDLLTL*STRLGL
Trigger: GAGGCCGAGGCGGGTGGATCACAAGGTGAGGAGATC...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CCA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTGATGGGTTCTTTACCTaGGCAGCCCCATGTTGCCTG +
Preference number: 2 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPDGFFT*AAPCCL
Trigger: CAGGCAACATGGGGCTGCCCAGGTAAAGAACCCATC...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CCA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCATCTACATCACTCCCCTaGAAGACGACGGCACTGAAT +
Preference number: 2 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSSTSLP*KTTALN
Trigger: ATTCAGTGCCGTCGTCTTCCAGGGGAGTGATGTAGA...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR CAA 90 bp TTCTATTGGCGCAGCAGCCGGCATTCACTCATGCAAGCTTCCAGCTaGCTTATCTATGTCTGCAGCTCGATTTTTCAGGCTGTTCTTTGT +
Preference number: 2 (lower is better)
Translates to: FYWRSSRHSLMQASS*LIYVCSSIFQAVLC
Trigger: ACAAAGAACAGCCTGAAAAATCGAGCTGCAGACATAGATAAGCAAGCTGGAAGCTTGCATGAGTGAATGCCGGCTGCTGCGCCAATAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR TCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAAGGTGGGAGAATGGCATaGACTCGGGAGGCGGAGCTT +
Preference number: 2 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQGGRMA*TREAEL
Trigger: AAGCTCCGCCTCCCGAGTTCATGCCATTCTCCCACC...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR TCA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCAGGAAGACGACGGCACTaGATTAGCTTTAACATGTGC +
Preference number: 2 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSGRRRH*ISFNMC
Trigger: GCACATGTTAAAGCTAATTCAGTGCCGTCGTCTTCC...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR GCA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTTTAACGGGGAAACCTTaGCAAGGACTCTGTGGCCCT +
Preference number: 2 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPLTGKP*QGLCGP
Trigger: AGGGCCACAGAGTCCTTGGCAAGGTTTCCCCGTTAA...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR GCA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTGAGAAGAGCTCTATGTaGAGAGAGGGGTCCCAGAGA +
Preference number: 2 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPEKSSM*REGSQR
Trigger: TCTCTGGGACCCCTCTCTGCACATAGAGCTCTTCTC...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR GCA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCAAAGTGGAACCAGCCCTaGCAACAACTTGATTTCAGG +
Preference number: 2 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSKWNQP*QQLDFR
Trigger: CCTGAAATCAAGTTGTTGGCAGGGCTGGTTCCACTT...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR GCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACAGCTGGGACAACAGGTaGCCACCACCACGCCCGTCT +
Preference number: 2 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYSWDNR*PPPRPS
Trigger: AGACGGGCGTGGTGGTGGGCACCTGTTGTCCCAGCT...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CCA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTCATTTGCATAGCATGTaGAGAAGCTGGCTGCCCCAC +
Preference number: 2 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPHLHSM*RSWLPH
Trigger: GTGGGGCAGCCAGCTTCTCCACATGCTATGCAAATG...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CCA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTGGGTCCCAGAGAAAATaGGTTGCCAGTTCCATGGTG +
Preference number: 2 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPGSQRK*VASSMV
Trigger: CACCATGGAACTGGCAACCCATTTTCTCTGGGACCC...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR TCA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCATGCTGTACACATGGTTaGCAAAGAAAAGGAAGAGGG +
Preference number: 2 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSCCTHG*QRKGRG
Trigger: CCCTCTTCCTTTTCTTTGTCAACCATGTGTACAGCA...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR GCA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCATGCAAGCTTCCAGCTTaGTTATCTATGTCTGCAGCT +
Preference number: 2 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSCKLPA*LSMSAA
Trigger: AGCTGCAGACATAGATAAGCAAGCTGGAAGCTTGCA...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR GCA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCAATCAGGTGTGCCATTTaGATAGCATGTGGAGAAGCT +
Preference number: 2 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSIRCAI*IACGEA
Trigger: AGCTTCTCCACATGCTATGCAAATGGCACACCTGAT...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR GCA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCACCAGAGAAAATGGGTTaGCAGTTCCATGGTGAAATG +
Preference number: 2 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSPEKMG*QFHGEM
Trigger: CATTTCACCATGGAACTGGCAACCCATTTTCTCTGG...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR GCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAACCGAGATTGCGCCACTaGACTCTAGCCTGGGTGAGA +
Preference number: 2 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQPRLRH*TLAWVR
Trigger: TCTCACCCAGGCTAGAGTGCAGTGGCGCAATCTCGG...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR GCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACCCAAGAAGGCGCCATTaGACTCCAGCCTGGGCAACG +
Preference number: 2 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYPRRRH*TPAWAT
Trigger: CGTTGCCCAGGCTGGAGTGCAATGGCGCCTTCTTGG...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAACAAGCTCTGCCTCCCTaGTTCACGCCATTCTCCTGC +
Preference number: 2 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQQALPP*FTPFSC
Trigger: GCAGGAGAATGGCGTGAACCAGGGAGGCAGAGCTTG...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR CAA 90 bp ATGTTTAATATGTGTCTTGTGGCTTACAACACAGACACATGCACATaGGCCTGGGGCTGCAGATTATTCAAGGAAGCATGCTCAGTGCTC +
Preference number: 2 (lower is better)
Translates to: MFNMCLVAYNTDTCT*AWGCRLFKEACSVL
Trigger: GAGCACTGAGCATGCTTCCTTGAATAATCTGCAGCCCCAGGCCAATGTGCATGTGTCTGTGTTGTAAGCCACAAGACACATATTAAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR TCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAAGGCAGGAGAATCACTTaGATCCGGGAGGTGGAGGTT +
Preference number: 2 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQGRRIT*IREVEV
Trigger: AACCTCCACCTCCCGGATTCAAGTGATTCTCCTGCC...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR TCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAAGCTGTCCTTTTGTGCTaGGTCAGTTCCTGGGAGGGG +
Preference number: 2 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKAVLLC*VSSWEG
Trigger: CCCCTCCCAGGAACTGACTCAGCACAAAAGGACAGC...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR TCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAAAGGTGGAGGTTGCAGTaGGCCAAGAAGGCGCCATTG +
Preference number: 2 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKRWRLQ*AKKAPL
Trigger: CAATGGCGCCTTCTTGGCTCACTGCAACCTCCACCT...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR GCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAAGGAAGAAGACTGGGATaGGGACACACCAGAGTGAGG +
Preference number: 2 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQGRRLG*GHTRVR
Trigger: CCTCACTCTGGTGTGTCCGCATCCCAGTCTTCTTCC...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR GCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACCCGAGATTGCGCCACTaGACTCTAGCCTGGGTGAGA +
Preference number: 2 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYPRLRH*TLAWVR
Trigger: TCTCACCCAGGCTAGAGTGCAGTGGCGCAATCTCGG...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR GCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAACCGAGATTGCGCCACTaGACTCTAGCCTGGGTGAGA +
Preference number: 2 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKPRLRH*TLAWVR
Trigger: TCTCACCCAGGCTAGAGTGCAGTGGCGCAATCTCGG...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR GCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAACTCGGCCTCCCAAAGTaGTCAGGTTACAGGCGTGAG +
Preference number: 2 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKLGLPK*SGYRRE
Trigger: CTCACGCCTGTAACCTGAGCACTTTGGGAGGCCGAG...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR GCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACCTGAGAGGTGGAGGTTaGAGTGAGCCAAGAAGGCGC +
Preference number: 2 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYLRGGG*SEPRRR
Trigger: GCGCCTTCTTGGCTCACTGCAACCTCCACCTCTCAG...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR GCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAACTGAGAGGTGGAGGTTaGAGTGAGCCAAGAAGGCGC +
Preference number: 2 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKLRGGG*SEPRRR
Trigger: GCGCCTTCTTGGCTCACTGCAACCTCCACCTCTCAG...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAAGATGGGTTCTTTACCTaGGCAGCCCCATGTTGCCTG +
Preference number: 2 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQDGFFT*AAPCCL
Trigger: CAGGCAACATGGGGCTGCCCAGGTAAAGAACCCATC...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAAGTTGTCCCACAGCCATaGAAGAAGACTGGGATGCGG +
Preference number: 2 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQVVPQP*KKTGMR
Trigger: CCGCATCCCAGTCTTCTTCCATGGCTGTGGGACAAC...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CCA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCACAGAAATGGGCAATTTaGGATGCTGGTCATTCTTTG +
Preference number: 2 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSQKWAI*DAGHSL
Trigger: CAAAGAATGACCAGCATCCCAAATTGCCCATTTCTG...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAACAAGCTCTGCCTCCCTaGTTCACGCCATTCTCCTGC +
Preference number: 2 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKQALPP*FTPFSC
Trigger: GCAGGAGAATGGCGTGAACCAGGGAGGCAGAGCTTG...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR TCA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCATCTGCTCTTGTAACATaGAAGCAGCCACAGATAATA +
Preference number: 2 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSSALVT*KQPQII
Trigger: TATTATCTGTGGCTGCTTTCATGTTACAAGAGCAGA...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR TCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAAGGCAGGAGAATCACTTaGATCCGGGAGGTGGAGGTT +
Preference number: 2 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKGRRIT*IREVEV
Trigger: AACCTCCACCTCCCGGATTCAAGTGATTCTCCTGCC...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR TCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAAGTTAGAGCCCAGGAATaGGCAAGGACAGCTTGGAGG +
Preference number: 2 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKVRAQE*ARTAWR
Trigger: CCTCCAAGCTGTCCTTGCTCATTCCTGGGCTCTAAC...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR TCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAAGCAATGGGAGTTAGCTaGGCATGCTCTACGGATCAG +
Preference number: 2 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQAMGVS*ACSTDQ
Trigger: CTGATCCGTAGAGCATGCTCAGCTAACTCCCATTGC...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR GCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAATTAACGGGGAAACCTTaGCAAGGACTCTGTGGCCCT +
Preference number: 2 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQLTGKP*QGLCGP
Trigger: AGGGCCACAGAGTCCTTGGCAAGGTTTCCCCGTTAA...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR GCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAATGGGCAGCCCCATGTTaGCTGTTCCTTTGCTGTACA +
Preference number: 2 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQWAAPC*LFLCCT
Trigger: TGTACAGCAAAGGAACAGGCAACATGGGGCTGCCCA...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR GCA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTATCAGGTGTGCCATTTaGATAGCATGTGGAGAAGCT +
Preference number: 2 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPIRCAI*IACGEA
Trigger: AGCTTCTCCACATGCTATGCAAATGGCACACCTGAT...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR GCA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTCCAGAGAAAATGGGTTaGCAGTTCCATGGTGAAATG +
Preference number: 2 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPPEKMG*QFHGEM
Trigger: CATTTCACCATGGAACTGGCAACCCATTTTCTCTGG...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR GCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACGGAAGAAGACTGGGATaGGGACACACCAGAGTGAGG +
Preference number: 2 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYGRRLG*GHTRVR
Trigger: CCTCACTCTGGTGTGTCCGCATCCCAGTCTTCTTCC...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR GCA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCAATGGGCAATTTGGGATaGTGGTCATTCTTTGCATTT +
Preference number: 2 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSMGNLG*WSFFAF
Trigger: AAATGCAAAGAATGACCAGCATCCCAAATTGCCCAT...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR GCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAAGGAGGTTCAGAATCTTaGAGTCTCCAGCTGCGTGAC +
Preference number: 2 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQGGSES*SLQLRD
Trigger: GTCACGCAGCTGGAGACTGCAAGATTCTGAACCTCC...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR GCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACTGGGTTCACCTTGCCTaGTGCCTAGACAGAGCTGCT +
Preference number: 2 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYWVHLA*CLDRAA
Trigger: AGCAGCTCTGTCTAGGCAGCAGGCAAGGTGAACCCA...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR GCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAACCAATGGGTTCACCTTaGCTGCTGCCTAGACAGAGC +
Preference number: 2 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKPMGSP*LLPRQS
Trigger: GCTCTGTCTAGGCAGCAGGCAAGGTGAACCCATTGG...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR GCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACCCAATGGGTTCACCTTaGCTGCTGCCTAGACAGAGC +
Preference number: 2 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYPMGSP*LLPRQS
Trigger: GCTCTGTCTAGGCAGCAGGCAAGGTGAACCCATTGG...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACGATGGGTTCTTTACCTaGGCAGCCCCATGTTGCCTG +
Preference number: 2 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYDGFFT*AAPCCL
Trigger: CAGGCAACATGGGGCTGCCCAGGTAAAGAACCCATC...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAACATTTGCATAGCATGTaGAGAAGCTGGCTGCCCCAC +
Preference number: 2 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQHLHSM*RSWLPH
Trigger: GTGGGGCAGCCAGCTTCTCCACATGCTATGCAAATG...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACGTTGTCCCACAGCCATaGAAGAAGACTGGGATGCGG +
Preference number: 2 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYVVPQP*KKTGMR
Trigger: CCGCATCCCAGTCTTCTTCCATGGCTGTGGGACAAC...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAAGTTGTCCCACAGCCATaGAAGAAGACTGGGATGCGG +
Preference number: 2 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKVVPQP*KKTGMR
Trigger: CCGCATCCCAGTCTTCTTCCATGGCTGTGGGACAAC...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CCA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTGCTAGGGGTAAGGCATaGAACAGAATCTTTCTCACA +
Preference number: 2 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPARGKA*NRIFLT
Trigger: TGTGAGAAAGATTCTGTTCCATGCCTTACCCCTAGC...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CCA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCAGATGAAAGCAGAGATTaGGGTGATGCTTCTATATTG +
Preference number: 2 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSDESRD*GDASIL
Trigger: CAATATAGAAGCATCACCCCAATCTCTGCTTTCATC...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAACCATGTCAGCCAGGATaGTCTCGATCTCCTCACCTT +
Preference number: 2 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQPCQPG*SRSPHL
Trigger: AAGGTGAGGAGATCGAGACCATCCTGGCTGACATGG...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAATTGGTGGGTAGGAGTTaGGAAGTGGGGAGTGCTGAT +
Preference number: 2 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQLVGRS*EVGSAD
Trigger: ATCAGCACTCCCCACTTCCCAACTCCTACCCACCAA...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR CAA 90 bp GAGTTGGCCTCTAATCTGAATGTTGTCCATATAAGAAGGGGAAATTaGGACACAGACACACCTAGAGGGAGAACATCACCTGAAGATGAA +
Preference number: 2 (lower is better)
Translates to: ELASNLNVVHIRRGN*DTDTPRGRTSPEDE
Trigger: TTCATCTTCAGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATGGACAACATTCAGATTAGAGGCCAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR TCA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTTTGCCAGTTCCATGGTaGAATGCACAGGGTTTTATA +
Preference number: 2 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPLPVPW*NAQGFI
Trigger: TATAAAACCCTGTGCATTTCACCATGGAACTGGCAA...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR TCA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTAAGCAGAGATTGGGGTaGTGCTTCTATATTGTCAAG +
Preference number: 2 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPKQRLG*CFYIVK
Trigger: CTTGACAATATAGAAGCATCACCCCAATCTCTGCTT...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR TCA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCAACCGTTTCCACTAATTaGGTGAGTTACATGAAAAGT +
Preference number: 2 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSTVSTN*VSYMKS
Trigger: ACTTTTCATGTAACTCACTCAATTAGTGGAAACGGT...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR TCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAAGCCCGGCCAACTGCGTaGCTTTTAAACCATAGTTTC +
Preference number: 2 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQARPTA*LLNHSF
Trigger: GAAACTATGGTTTAAAAGTCACGCAGTTGGCCGGGC...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR TCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAAGAGAACTTGAGAAGATaGGGAGGAGCCAATCTGGGT +
Preference number: 2 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQENLRR*GGANLG
Trigger: ACCCAGATTGGCTCCTCCTCATCTTCTCAAGTTCTC...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR TCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACGCAGCACTGAGAACTTaGGAAGATGAGGAGGAGCCA +
Preference number: 2 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYAALRT*EDEEEP
Trigger: TGGCTCCTCCTCATCTTCTCAAGTTCTCAGTGCTGC...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR GCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACTTAACGGGGAAACCTTaGCAAGGACTCTGTGGCCCT +
Preference number: 2 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYLTGKP*QGLCGP
Trigger: AGGGCCACAGAGTCCTTGGCAAGGTTTCCCCGTTAA...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR GCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACTGGGCAGCCCCATGTTaGCTGTTCCTTTGCTGTACA +
Preference number: 2 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYWAAPC*LFLCCT
Trigger: TGTACAGCAAAGGAACAGGCAACATGGGGCTGCCCA...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR GCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACGAGAAGAGCTCTATGTaGAGAGAGGGGTCCCAGAGA +
Preference number: 2 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYEKSSM*REGSQR
Trigger: TCTCTGGGACCCCTCTCTGCACATAGAGCTCTTCTC...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR GCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAAGGAGGTTCAGAATCTTaGAGTCTCCAGCTGCGTGAC +
Preference number: 2 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKGGSES*SLQLRD
Trigger: GTCACGCAGCTGGAGACTGCAAGATTCTGAACCTCC...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR GCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACTACAACACAGACACATaGACATTGGCCTGGGGCTGC +
Preference number: 2 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYYNTDT*TLAWGC
Trigger: GCAGCCCCAGGCCAATGTGCATGTGTCTGTGTTGTA...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACGGGTCCCAGAGAAAATaGGTTGCCAGTTCCATGGTG +
Preference number: 2 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYGSQRK*VASSMV
Trigger: CACCATGGAACTGGCAACCCATTTTCTCTGGGACCC...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAACTCACAGCCTTCAAGTaGAACCAGCCCTGCCAACAA +
Preference number: 2 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKLTAFK*NQPCQQ
Trigger: TTGTTGGCAGGGCTGGTTCCACTTGAAGGCTGTGAG...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAACACTGCACTCTAGCCTaGGTGAGAAAGCAAGACTCC +
Preference number: 2 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKHCTLA*VRKQDS
Trigger: GGAGTCTTGCTTTCTCACCCAGGCTAGAGTGCAGTG...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACCACTGCACTCTAGCCTaGGTGAGAAAGCAAGACTCC +
Preference number: 2 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYHCTLA*VRKQDS
Trigger: GGAGTCTTGCTTTCTCACCCAGGCTAGAGTGCAGTG...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAATTCGGGAGGTTGAGGTaGGAGAATGGCATGAACTCG +
Preference number: 2 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKFGRLR*ENGMNS
Trigger: CGAGTTCATGCCATTCTCCCACCTCAACCTCCCGAA...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAAAATACAAAAATCAGCTaGGCGTGGTGGCACGTGCGT +
Preference number: 2 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQNTKIS*AWWHVR
Trigger: ACGCACGTGCCACCACGCCCAGCTGATTTTTGTATT...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAACCATGTCAGCCAGGATaGTCTCGATCTCCTCACCTT +
Preference number: 2 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKPCQPG*SRSPHL
Trigger: AAGGTGAGGAGATCGAGACCATCCTGGCTGACATGG...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACTTGGTGGGTAGGAGTTaGGAAGTGGGGAGTGCTGAT +
Preference number: 2 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYLVGRS*EVGSAD
Trigger: ATCAGCACTCCCCACTTCCCAACTCCTACCCACCAA...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAAGCACCTTACCTGCAATaGGAGTTAGCTGAGCATGCT +
Preference number: 2 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQAPYLQ*ELAEHA
Trigger: AGCATGCTCAGCTAACTCCCATTGCAGGTAAGGTGC...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR CAA 90 bp AGAAGGCTGGGAGTAATTAGGATTAAGATTTTGGGCATGTCAGGTTaGAAATGTGTGTTAAGCTTCCAAGTGGAGTTGTCTAAGAGGCAG +
Preference number: 2 (lower is better)
Translates to: RRLGVIRIKILGMSG*KCVLSFQVELSKRQ
Trigger: CTGCCTCTTAGACAACTCCACTTGGAAGCTTAACACACATTTCAAACCTGACATGCCCAAAATCTTAATCCTAATTACTCCCAGCCTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR TCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACGCCCGGCCAACTGCGTaGCTTTTAAACCATAGTTTC +
Preference number: 2 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYARPTA*LLNHSF
Trigger: GAAACTATGGTTTAAAAGTCACGCAGTTGGCCGGGC...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR TCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAAGAGAACTTGAGAAGATaGGGAGGAGCCAATCTGGGT +
Preference number: 2 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKENLRR*GGANLG
Trigger: ACCCAGATTGGCTCCTCCTCATCTTCTCAAGTTCTC...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR TCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAAGGAATGTTGCAGCACTaGGAACTTGAGAAGATGAGG +
Preference number: 2 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQGMLQH*ELEKMR
Trigger: CCTCATCTTCTCAAGTTCTCAGTGCTGCAACATTCC...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR TCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAAAGGCAGTTGGGTCTATaGATCTGGAGTCATCTTGTC +
Preference number: 2 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQRQLGL*IWSHLV
Trigger: GACAAGATGACTCCAGATTCATAGACCCAACTGCCT...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR GCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACAAGAACCACCAAAAGTaGCTCCCAATGGTCCAAGCC +
Preference number: 2 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYKNHQK*LPMVQA
Trigger: GGCTTGGACCATTGGGAGGCACTTTTGGTGGTTCTT...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR GCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAAAAGAACCACCAAAAGTaGCTCCCAATGGTCCAAGCC +
Preference number: 2 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKKNHQK*LPMVQA
Trigger: GGCTTGGACCATTGGGAGGCACTTTTGGTGGTTCTT...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR GCA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCAATTAGCTTTAACATGTaGGTGATGGTGAATAATGAC +
Preference number: 2 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSISFNM*VMVNND
Trigger: GTCATTATTCACCATCACGCACATGTTAAAGCTAAT...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR GCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAAGCCTGGAGTGTTGGGTaGATTCTTGTGTCTCACAAT +
Preference number: 2 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQAWSVG*ILVSHN
Trigger: ATTGTGAGACACAAGAATGCACCCAACACTCCAGGC...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR GCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAAGTGCTCATCAGTAAATaGCTGGAGTGTTGGGTGCAT +
Preference number: 2 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQVLISK*LECWVH
Trigger: ATGCACCCAACACTCCAGGCATTTACTGATGAGCAC...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAACATGTTGAACATGACTaGTCCCCAGCTAGCCCTTTT +
Preference number: 2 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQHVEHD*SPASPF
Trigger: AAAAGGGCTAGCTGGGGACCAGTCATGTTCAACATG...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CCA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTCCTTTGCTGTACACATaGTTGACAAAGAAAAGGAAG +
Preference number: 2 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPPLLYT*LTKKRK
Trigger: CTTCCTTTTCTTTGTCAACCATGTGTACAGCAAAGG...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CCA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTCTTTTATTATACAGATaGGTTCTTTACCTGGGCAGC +
Preference number: 2 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPLLLYR*VLYLGS
Trigger: GCTGCCCAGGTAAAGAACCCATCTGTATAATAAAAG...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CCA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTGATGAAAGCAGAGATTaGGGTGATGCTTCTATATTG +
Preference number: 2 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPDESRD*GDASIL
Trigger: CAATATAGAAGCATCACCCCAATCTCTGCTTTCATC...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACTCTACATCACTCCCCTaGAAGACGACGGCACTGAAT +
Preference number: 2 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYSTSLP*KTTALN
Trigger: ATTCAGTGCCGTCGTCTTCCAGGGGAGTGATGTAGA...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAAACATGCACATTGGCCTaGGGCTGCAGATTATTCAAG +
Preference number: 2 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQTCTLA*GCRLFK
Trigger: CTTGAATAATCTGCAGCCCCAGGCCAATGTGCATGT...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR CAA 90 bp AGGTCAGACCACTTTCACCGTCATAATGTTCTCAGCGATGATTTTTaGCAAAGGCAGTTTCAGCATCACTCTCCTCAATTAGAAATGGAA +
Preference number: 2 (lower is better)
Translates to: RSDHFHRHNVLSDDF*QRQFQHHSPQLEME
Trigger: TTCCATTTCTAATTGAGGAGAGTGATGCTGAAACTGCCTTTGCAAAAAATCATCGCTGAGAACATTATGACGGTGAAAGTGGTCTGACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR TCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAATGCTGTACACATGGTTaGCAAAGAAAAGGAAGAGGG +
Preference number: 2 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQCCTHG*QRKGRG
Trigger: CCCTCTTCCTTTTCTTTGTCAACCATGTGTACAGCA...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR TCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAAGGAAGACGACGGCACTaGATTAGCTTTAACATGTGC +
Preference number: 2 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKGRRRH*ISFNMC
Trigger: GCACATGTTAAAGCTAATTCAGTGCCGTCGTCTTCC...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR TCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAATGGAAGAGGAGTTGTTaGCAAAGGAACTCATTCCAC +
Preference number: 2 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQWKRSC*QRNSFH
Trigger: GTGGAATGAGTTCCTTTGTCAACAACTCCTCTTCCA...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR TCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAAGGAATGTTGCAGCACTaGGAACTTGAGAAGATGAGG +
Preference number: 2 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKGMLQH*ELEKMR
Trigger: CCTCATCTTCTCAAGTTCTCAGTGCTGCAACATTCC...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR TCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAACAAGGGATTCTGACTTaGGATGCTGGAATAATGGAG +
Preference number: 2 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQQGILT*DAGIME
Trigger: CTCCATTATTCCAGCATCTCAAGTCAGAATCCCTTG...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR GCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACAAGTGGAACCAGCCCTaGCAACAACTTGATTTCAGG +
Preference number: 2 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYKWNQP*QQLDFR
Trigger: CCTGAAATCAAGTTGTTGGCAGGGCTGGTTCCACTT...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR GCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAAAAGTGGAACCAGCCCTaGCAACAACTTGATTTCAGG +
Preference number: 2 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKKWNQP*QQLDFR
Trigger: CCTGAAATCAAGTTGTTGGCAGGGCTGGTTCCACTT...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR GCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAATTGCACCATTGTAACTaGCCAATGGGTTCACCTTGC +
Preference number: 2 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKLHHCN*PMGSPC
Trigger: GCAAGGTGAACCCATTGGGCAGTTACAATGGTGCAA...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR GCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACTTGCACCATTGTAACTaGCCAATGGGTTCACCTTGC +
Preference number: 2 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYLHHCN*PMGSPC
Trigger: GCAAGGTGAACCCATTGGGCAGTTACAATGGTGCAA...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR GCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACGTGCTCATCAGTAAATaGCTGGAGTGTTGGGTGCAT +
Preference number: 2 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYVLISK*LECWVH
Trigger: ATGCACCCAACACTCCAGGCATTTACTGATGAGCAC...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR GCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAAAGGAAGCATGCTCAGTaGTCATCAGTAAATGCCTGG +
Preference number: 2 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKRKHAQ*SSVNAW
Trigger: CCAGGCATTTACTGATGAGCACTGAGCATGCTTCCT...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR GCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACACATTGGCCTGGGGCTaGAGATTATTCAAGGAAGCA +
Preference number: 2 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYTLAWG*RLFKEA
Trigger: TGCTTCCTTGAATAATCTGCAGCCCCAGGCCAATGT...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACCATGTTGAACATGACTaGTCCCCAGCTAGCCCTTTT +
Preference number: 2 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYHVEHD*SPASPF
Trigger: AAAAGGGCTAGCTGGGGACCAGTCATGTTCAACATG...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAAAAATCTAACTTAGGCTaGGTGCTGTGGCTCATGCTT +
Preference number: 2 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQKSNLG*VLWLML
Trigger: AAGCATGAGCCACAGCACCCAGCCTAAGTTAGATTT...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACGAAGGGAATTGGTTTTaGGAAAGGGCTGTTACCGTC +
Preference number: 2 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYEGNWF*ERAVTV
Trigger: GACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTC...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAAAAATGCCTGGAGTGTTaGGTGCATTCTTGTGTCTCA +
Preference number: 2 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQKCLEC*VHSCVS
Trigger: TGAGACACAAGAATGCACCCAACACTCCAGGCATTT...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAAACATGCACATTGGCCTaGGGCTGCAGATTATTCAAG +
Preference number: 2 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKTCTLA*GCRLFK
Trigger: CTTGAATAATCTGCAGCCCCAGGCCAATGTGCATGT...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAAGAGGAGGAGCCAATCTaGGTTTCAGCTTTAACACCA +
Preference number: 2 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKEEEPI*VSALTP
Trigger: TGGTGTTAAAGCTGAAACCCAGATTGGCTCCTCCTC...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR TCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAAAGCAAACCTTCACAGTaGAAAAGGCCAGAGAGTAAA +
Preference number: 2 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQSKPSQ*KRPESK
Trigger: TTTACTCTCTGGCCTTTTTCACTGTGAAGGTTTGCT...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR TCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAATGGAAGAGGAGTTGTTaGCAAAGGAACTCATTCCAC +
Preference number: 2 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKWKRSC*QRNSFH
Trigger: GTGGAATGAGTTCCTTTGTCAACAACTCCTCTTCCA...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR TCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAATTTTCAACAAGGATGTaGAGACAATTCACTGGGGAG +
Preference number: 2 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQFSTRM*RQFTGE
Trigger: CTCCCCAGTGAATTGTCTTCACATCCTTGTTGAAAA...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR TCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAAAATCCAAAGTATGTGTaGAATTGGGCCATAGCACCT +
Preference number: 2 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQNPKYV*NWAIAP
Trigger: AGGTGCTATGGCCCAATTTCACACATACTTTGGATT...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR TCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAAGTTGTTTGCTTTACATaGAGGTCCTGGACTGAACAA +
Preference number: 2 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQVVCFT*RSWTEQ
Trigger: TTGTTCAGTCCAGGACCTTCATGTAAAGCAAACAAC...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR GCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACTGCAAGCTTCCAGCTTaGTTATCTATGTCTGCAGCT +
Preference number: 2 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYCKLPA*LSMSAA
Trigger: AGCTGCAGACATAGATAAGCAAGCTGGAAGCTTGCA...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR GCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAAATCAGGTGTGCCATTTaGATAGCATGTGGAGAAGCT +
Preference number: 2 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKIRCAI*IACGEA
Trigger: AGCTTCTCCACATGCTATGCAAATGGCACACCTGAT...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR GCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACCCAGAGAAAATGGGTTaGCAGTTCCATGGTGAAATG +
Preference number: 2 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYPEKMG*QFHGEM
Trigger: CATTTCACCATGGAACTGGCAACCCATTTTCTCTGG...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CCA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTGAATACATTGATGTTTaGATACATTCAAGAACCACC +
Preference number: 2 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPEYIDV*IHSRTT
Trigger: GGTGGTTCTTGAATGTATCCAAACATCAATGTATTC...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAAGCTAGGGGTAAGGCATaGAACAGAATCTTTCTCACA +
Preference number: 2 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKARGKA*NRIFLT
Trigger: TGTGAGAAAGATTCTGTTCCATGCCTTACCCCTAGC...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAAAAATCTAACTTAGGCTaGGTGCTGTGGCTCATGCTT +
Preference number: 2 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKKSNLG*VLWLML
Trigger: AAGCATGAGCCACAGCACCCAGCCTAAGTTAGATTT...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
40% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACAAATGCCTGGAGTGTTaGGTGCATTCTTGTGTCTCA +
Preference number: 2 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYKCLEC*VHSCVS
Trigger: TGAGACACAAGAATGCACCCAACACTCCAGGCATTT...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACTGTCTAAGAGGCAGTTaGGTCTATGAATCTGGAGTC +
Preference number: 2 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYCLRGS*VYESGV
Trigger: GACTCCAGATTCATAGACCCAACTGCCTCTTAGACA...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAATGTCTAAGAGGCAGTTaGGTCTATGAATCTGGAGTC +
Preference number: 2 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKCLRGS*VYESGV
Trigger: GACTCCAGATTCATAGACCCAACTGCCTCTTAGACA...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAATGGGAAGATTGTGAGTaGAGAAGGCTGGGAGTAATT +
Preference number: 2 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKWEDCE*RRLGVI
Trigger: AATTACTCCCAGCCTTCTCCACTCACAATCTTCCCA...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAAAAACCAGGAAAGTGCTaGGCAATTGAGATCAGTTGT +
Preference number: 2 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQKPGKC*AIEISC
Trigger: ACAACTGATCTCAATTGCCCAGCACTTTCCTGGTTT...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAATATGAATTTGGTCAGTaGGAGCCCAGAGGGAATATT +
Preference number: 2 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQYEFGQ*EPRGNI
Trigger: AATATTCCCTCTGGGCTCCCACTGACCAAATTCATA...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR CAA 90 bp GCAGTGATAGAACTGAGTGAATATAGAATGTCAGTGGAAGAGGAGTaGTTGACAAAGGAACTCATTCCACCTTCTAAGGAGTATAGAAAA +
Preference number: 2 (lower is better)
Translates to: AVIELSEYRMSVEEE*LTKELIPPSKEYRK
Trigger: TTTTCTATACTCCTTAGAAGGTGGAATGAGTTCCTTTGTCAACAACTCCTCTTCCACTGACATTCTATATTCACTCAGTTCTATCACTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR TCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAATTGCCAGTTCCATGGTaGAATGCACAGGGTTTTATA +
Preference number: 2 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKLPVPW*NAQGFI
Trigger: TATAAAACCCTGTGCATTTCACCATGGAACTGGCAA...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR TCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACTGTTTATATCCCTGGTaGTCTACTAGTAGCCACATC +
Preference number: 2 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYCLYPW*STSSHI
Trigger: GATGTGGCTACTAGTAGATCACCAGGGATATAAACA...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR TCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAAATGCTACAACATGGATaGACCTTGAAAGCATTAAGC +
Preference number: 2 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQMLQHG*TLKALS
Trigger: GCTTAATGCTTTCAAGGTTCATCCATGTTGTAGCAT...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR TCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAATTTAGAAAAGGAGGTTaGAGCAGAGGACTTAATCCA +
Preference number: 2 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQFRKGG*SRGLNP
Trigger: TGGATTAAGTCCTCTGCTTCAACCTCCTTTTCTAAA...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR TCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAAAAAGTGCTGGGCAATTaGGATCAGTTGTTTGCTTTA +
Preference number: 2 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQKVLGN*DQLFAL
Trigger: TAAAGCAAACAACTGATCTCAATTGCCCAGCACTTT...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR TCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAATGGTTTTCCTGTAACTaGGATGTTTTTCTGGGATTG +
Preference number: 2 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQWFSCN*DVFLGL
Trigger: CAATCCCAGAAAAACATCTCAGTTACAGGAAAACCA...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAACTTTTATTATACAGATaGGTTCTTTACCTGGGCAGC +
Preference number: 2 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQLLLYR*VLYLGS
Trigger: GCTGCCCAGGTAAAGAACCCATCTGTATAATAAAAG...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAAGATGAAAGCAGAGATTaGGGTGATGCTTCTATATTG +
Preference number: 2 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQDESRD*GDASIL
Trigger: CAATATAGAAGCATCACCCCAATCTCTGCTTTCATC...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACCAGAAATGGGCAATTTaGGATGCTGGTCATTCTTTG +
Preference number: 2 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYQKWAI*DAGHSL
Trigger: CAAAGAATGACCAGCATCCCAAATTGCCCATTTCTG...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACTGCCATGTACATAGATaGGAAGATTGTGAGTGGAGA +
Preference number: 2 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYCHVHR*EDCEWR
Trigger: TCTCCACTCACAATCTTCCCATCTATGTACATGGCA...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAAGTGAAGACAATTCACTaGGGAGAAAGAATGGTCTAT +
Preference number: 2 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQVKTIH*GERMVY
Trigger: ATAGACCATTCTTTCTCCCCAGTGAATTGTCTTCAC...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR TCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAATTGTCAAAATCAAGATaGAGCAGCATAGTTGTCTGG +
Preference number: 2 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKLSKSR*SSIVVW
Trigger: CCAGACAACTATGCTGCTTCATCTTGATTTTGACAA...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR TCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAATCTGCTCTTGTAACATaGAAGCAGCCACAGATAATA +
Preference number: 2 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKSALVT*KQPQII
Trigger: TATTATCTGTGGCTGCTTTCATGTTACAAGAGCAGA...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR TCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAATGGAGTCATCTTGTCTaGAGATACGCATTTTGGATT +
Preference number: 2 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKWSHLV*RYAFWI
Trigger: AATCCAAAATGCGTATCTTCAGACAAGATGACTCCA...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR TCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAAATGCTACAACATGGATaGACCTTGAAAGCATTAAGC +
Preference number: 2 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKMLQHG*TLKALS
Trigger: GCTTAATGCTTTCAAGGTTCATCCATGTTGTAGCAT...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR TCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAAAGACATATAGCCCGATaGAATAGAATCAAGAGTACA +
Preference number: 2 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQRHIAR*NRIKST
Trigger: TGTACTCTTGATTCTATTTCATCGGGCTATATGTCT...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR TCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAAAAATTCTACAGCAAATaGGTGTCAAACATTTCCTGG +
Preference number: 2 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQKFYSK*VSNISW
Trigger: CCAGGAAATGTTTGACACTCATTTGCTGTAGAATTT...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR GCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACATGGGCAATTTGGGATaGTGGTCATTCTTTGCATTT +
Preference number: 2 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYMGNLG*WSFFAF
Trigger: AAATGCAAAGAATGACCAGCATCCCAAATTGCCCAT...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR GCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAATTATTCAAGGAAGCATaGTCAGTGCTCATCAGTAAA +
Preference number: 2 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQLFKEA*SVLISK
Trigger: TTTACTGATGAGCACTGAGCATGCTTCCTTGAATAA...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR GCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAAGGAATAATGGAGTTTTaGCATGTACATAGATGGGAA +
Preference number: 2 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQGIMEF*HVHRWE
Trigger: TTCCCATCTATGTACATGGCAAAACTCCATTATTCC...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR GCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAACCCTGTTCTCCAATATaGAACATTTTTAGTGGTCAT +
Preference number: 2 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQPCSPI*NIFSGH
Trigger: ATGACCACTAAAAATGTTGCATATTGGAGAACAGGG...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAACCTTTGCTGTACACATaGTTGACAAAGAAAAGGAAG +
Preference number: 2 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKPLLYT*LTKKRK
Trigger: CTTCCTTTTCTTTGTCAACCATGTGTACAGCAAAGG...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACCTTTTATTATACAGATaGGTTCTTTACCTGGGCAGC +
Preference number: 2 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYLLLYR*VLYLGS
Trigger: GCTGCCCAGGTAAAGAACCCATCTGTATAATAAAAG...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAAGGCAATTTGGGATGCTaGTCATTCTTTGCATTTAAA +
Preference number: 2 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQGNLGC*SFFAFK
Trigger: TTTAAATGCAAAGAATGACCAGCATCCCAAATTGCC...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAATTAACACCAACCAACTaGTACCTGTTTATATCCCTG +
Preference number: 2 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKLTPTN*YLFISL
Trigger: CAGGGATATAAACAGGTACCAGTTGGTTGGTGTTAA...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAATCTGACTTGAGATGCTaGAATAATGGAGTTTTGCCA +
Preference number: 2 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKSDLRC*NNGVLP
Trigger: TGGCAAAACTCCATTATTCCAGCATCTCAAGTCAGA...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACTCTGACTTGAGATGCTaGAATAATGGAGTTTTGCCA +
Preference number: 2 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYSDLRC*NNGVLP
Trigger: TGGCAAAACTCCATTATTCCAGCATCTCAAGTCAGA...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAATGCATCAAAATCATCTaGCAAGAGACTTATATCCAG +
Preference number: 2 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQCIKII*QETYIQ
Trigger: CTGGATATAAGTCTCTTGCCAGATGATTTTGATGCA...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAACCTTGGTTTAGGCAGTaGATTTTTAGATATGGTATC +
Preference number: 2 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQPWFRQ*IFRYGI
Trigger: GATACCATATCTAAAAATCCACTGCCTAAACCAAGG...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR TCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAAACCGTTTCCACTAATTaGGTGAGTTACATGAAAAGT +
Preference number: 2 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKTVSTN*VSYMKS
Trigger: ACTTTTCATGTAACTCACTCAATTAGTGGAAACGGT...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR TCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAATTCATGGAAGAGTGTTaGAAATTGATCGATTCCTTC +
Preference number: 2 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKFMEEC*KLIDSF
Trigger: GAAGGAATCGATCAATTTTCAACACTCTTCCATGAA...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR TCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACCTTTTGTCTAAGAAATaGCTAGTGGTTTCATGGAAG +
Preference number: 2 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYLLSKK*LVVSWK
Trigger: CTTCCATGAAACCACTAGTCATTTCTTAGACAAAAG...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR TCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAACTTTTGTCTAAGAAATaGCTAGTGGTTTCATGGAAG +
Preference number: 2 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKLLSKK*LVVSWK
Trigger: CTTCCATGAAACCACTAGTCATTTCTTAGACAAAAG...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR GCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACGGAATAATGGAGTTTTaGCATGTACATAGATGGGAA +
Preference number: 2 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYGIMEF*HVHRWE
Trigger: TTCCCATCTATGTACATGGCAAAACTCCATTATTCC...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAAGAATACATTGATGTTTaGATACATTCAAGAACCACC +
Preference number: 2 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQEYIDV*IHSRTT
Trigger: GGTGGTTCTTGAATGTATCCAAACATCAATGTATTC...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACGGCAATTTGGGATGCTaGTCATTCTTTGCATTTAAA +
Preference number: 2 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYGNLGC*SFFAFK
Trigger: TTTAAATGCAAAGAATGACCAGCATCCCAAATTGCC...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAAACCCTAAAATTTATGTaGAATGGTAGAGGATTCACA +
Preference number: 2 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQTLKFM*NGRGFT
Trigger: TGTGAATCCTCTACCATTCCACATAAATTTTAGGGT...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR CAA 90 bp ATTGTTGGTGGAGATGAAAATGGTGCAGTCACTAAGAAAAATATTTaGGCAGTTCCTCAATATGTTAAACATAGCATTACCATACAACCC +
Preference number: 2 (lower is better)
Translates to: IVGGDENGAVTKKNI*AVPQYVKHSITIQP
Trigger: GGGTTGTATGGTAATGCTATGTTTAACATATTGAGGAACTGCCAAAATATTTTTCTTAGTGACTGCACCATTTTCATCTCCACCAACAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACGAATACATTGATGTTTaGATACATTCAAGAACCACC +
Preference number: 2 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYEYIDV*IHSRTT
Trigger: GGTGGTTCTTGAATGTATCCAAACATCAATGTATTC...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACTTAATATGTGTCTTGTaGCTTACAACACAGACACAT +
Preference number: 2 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYLICVL*LTTQTH
Trigger: ATGTGTCTGTGTTGTAAGCCACAAGACACATATTAA...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAATTAATATGTGTCTTGTaGCTTACAACACAGACACAT +
Preference number: 2 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKLICVL*LTTQTH
Trigger: ATGTGTCTGTGTTGTAAGCCACAAGACACATATTAA...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR TCA 72 bp GCTGAGTCAGTTCCTGGGAGGGGCCACAAGACCAGATaGGTTAATCAGTCTGGGTGGTGCCAGCTGAGCAAT +
Preference number: 3 (lower is better)
Translates to: AESVPGRGHKTR*VNQSGWCQLSN
Trigger: ATTGCTCAGCTGGCACCACCCAGACTGATTAACTCATCTGGTCTTGTGGCCCCTCCCAGGAACTGACTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR CCA 72 bp TTGAACATGACTGGTCCCCAGCTAGCCCTTTTCTATTaGCGCAGCAGCCGGCATTCACTCATGCAAGCTTCC +
Preference number: 3 (lower is better)
Translates to: LNMTGPQLALFY*RSSRHSLMQAS
Trigger: GGAAGCTTGCATGAGTGAATGCCGGCTGCTGCGCCAATAGAAAAGGGCTAGCTGGGGACCAGTCATGTTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CAA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCAGAGGGAGCCTCCATGTaGAACATGACTGGTCCCCAG +
Preference number: 3 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSEGASM*NMTGPQ
Trigger: CTGGGGACCAGTCATGTTCAACATGGAGGCTCCCTC...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CAA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCAAGGCAGGAGAATCACTaGAATCCGGGAGGTGGAGGT +
Preference number: 3 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSRQENH*NPGGGG
Trigger: ACCTCCACCTCCCGGATTCAAGTGATTCTCCTGCCT...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR GCA 72 bp GCAGCAGCCGGCATTCACTCATGCAAGCTTCCAGCTTaGTTATCTATGTCTGCAGCTCGATTTTTCAGGCTG +
Preference number: 3 (lower is better)
Translates to: AAAGIHSCKLPA*LSMSAARFFRL
Trigger: CAGCCTGAAAAATCGAGCTGCAGACATAGATAAGCAAGCTGGAAGCTTGCATGAGTGAATGCCGGCTGCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR GCA 72 bp CCCTTTTCTATTGGCGCAGCAGCCGGCATTCACTCATaGAAGCTTCCAGCTTGCTTATCTATGTCTGCAGCT +
Preference number: 3 (lower is better)
Translates to: PFSIGAAAGIHS*KLPACLSMSAA
Trigger: AGCTGCAGACATAGATAAGCAAGCTGGAAGCTTGCATGAGTGAATGCCGGCTGCTGCGCCAATAGAAAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR GCA 72 bp GGTTTGTTGTCCCACAGCCATGGAAGAAGACTGGGATaGGGACACACCAGAGTGAGGTTAAGAGCAGAAGTT +
Preference number: 3 (lower is better)
Translates to: GLLSHSHGRRLG*GHTRVRLRAEV
Trigger: AACTTCTGCTCTTAACCTCACTCTGGTGTGTCCGCATCCCAGTCTTCTTCCATGGCTGTGGGACAACAAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR GCA 72 bp GGTGATGCTTCTATATTGTCAAGGAAAGCCAAAGACTaGCAGCAACCGGCAGAAGCTAGGGGTAAGGCATGG +
Preference number: 3 (lower is better)
Translates to: GDASILSRKAKD*QQPAEARGKAW
Trigger: CCATGCCTTACCCCTAGCTTCTGCCGGTTGCTGGCAGTCTTTGGCTTTCCTTGACAATATAGAAGCATCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR CCA 72 bp GGCAGCCCCATGTTGCCTGTTCCTTTGCTGTACACATaGTTGACAAAGAAAAGGAAGAGGGAGCCTCCATGT +
Preference number: 3 (lower is better)
Translates to: GSPMLPVPLLYT*LTKKRKREPPC
Trigger: ACATGGAGGCTCCCTCTTCCTTTTCTTTGTCAACCATGTGTACAGCAAAGGAACAGGCAACATGGGGCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CAA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTGAGGGAGCCTCCATGTaGAACATGACTGGTCCCCAG +
Preference number: 3 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPEGASM*NMTGPQ
Trigger: CTGGGGACCAGTCATGTTCAACATGGAGGCTCCCTC...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CAA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAAGCCAAGAAGGCGCCATaGCACTCCAGCCTGGGCAAC +
Preference number: 3 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQAKKAP*HSSLGN
Trigger: GTTGCCCAGGCTGGAGTGCAATGGCGCCTTCTTGGC...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR CCA 72 bp AAGGCATGGAACAGAATCTTTCTCACAGCCTTCAAGTaGAACCAGCCCTGCCAACAACTTGATTTCAGGCGT +
Preference number: 3 (lower is better)
Translates to: KAWNRIFLTAFK*NQPCQQLDFRR
Trigger: ACGCCTGAAATCAAGTTGTTGGCAGGGCTGGTTCCACTTGAAGGCTGTGAGAAAGATTCTGTTCCATGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CAA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAACTGGGCAGCCCCATGTaGCCTGTTCCTTTGCTGTAC +
Preference number: 3 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQLGSPM*PVPLLY
Trigger: GTACAGCAAAGGAACAGGCAACATGGGGCTGCCCAG...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR GCA 72 bp AGAATCTTTCTCACAGCCTTCAAGTGGAACCAGCCCTaGCAACAACTTGATTTCAGGCGTCATAGTCTACAG +
Preference number: 3 (lower is better)
Translates to: RIFLTAFKWNQP*QQLDFRRHSLQ
Trigger: CTGTAGACTATGACGCCTGAAATCAAGTTGTTGGCAGGGCTGGTTCCACTTGAAGGCTGTGAGAAAGATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR GCA 72 bp GCTCAGTGCTCATCAGTAAATGCCTGGAGTGTTGGGTaGATTCTTGTGTCTCACAATTTAGAAGCAGCAGTG +
Preference number: 3 (lower is better)
Translates to: AQCSSVNAWSVG*ILVSHNLEAAV
Trigger: CACTGCTGCTTCTAAATTGTGAGACACAAGAATGCACCCAACACTCCAGGCATTTACTGATGAGCACTGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR CCA 72 bp GATCAGGTGTGCCATTTGCATAGCATGTGGAGAAGCTaGCTGCCCCACCCTAATCTTTTATTATACAGATGG +
Preference number: 3 (lower is better)
Translates to: DQVCHLHSMWRS*LPHPNLLLYRW
Trigger: CCATCTGTATAATAAAAGATTAGGGTGGGGCAGCCAGCTTCTCCACATGCTATGCAAATGGCACACCTGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR CCA 72 bp GGCAGTCTAGTCTCCCAGCAGGAAGGGAATTGGTTTTaGGAAAGGGCTGTTACCGTCTTTGTTTCAAAGTTA +
Preference number: 3 (lower is better)
Translates to: GSLVSQQEGNWF*ERAVTVFVSKL
Trigger: TAACTTTGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGAGACTAGACTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR CCA 72 bp GGTTTTACAATAGTGATGTTGTCCCCAGAAGCAATTTaGGGAGGTTCAGAATCTTGCAGTCTCCAGCTGCGT +
Preference number: 3 (lower is better)
Translates to: GFTIVMLSPEAI*GGSESCSLQLR
Trigger: ACGCAGCTGGAGACTGCAAGATTCTGAACCTCCCCAAATTGCTTCTGGGGACAACATCACTATTGTAAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR CCA 72 bp GCATGCTCAGTGCTCATCAGTAAATGCCTGGAGTGTTaGGTGCATTCTTGTGTCTCACAATTTAGAAGCAGC +
Preference number: 3 (lower is better)
Translates to: ACSVLISKCLEC*VHSCVSQFRSS
Trigger: GCTGCTTCTAAATTGTGAGACACAAGAATGCACCCAACACTCCAGGCATTTACTGATGAGCACTGAGCATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CAA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCAATAAGAAGGGGAAATTaGGACACAGACACACCTAGA +
Preference number: 3 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSIRRGN*DTDTPR
Trigger: TCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTAT...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CAA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCAACAGAAATGGGCAATTaGGGATGCTGGTCATTCTTT +
Preference number: 3 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSTEMGN*GCWSFF
Trigger: AAAGAATGACCAGCATCCCAAATTGCCCATTTCTGT...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CAA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCACTCAGCGATGATTTTTaGCAAAGGCAGTTTCAGCAT +
Preference number: 3 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSLSDDF*QRQFQH
Trigger: ATGCTGAAACTGCCTTTGCAAAAAATCATCGCTGAG...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR TCA 72 bp CCTGTTCTACATCACTCCCCTGGAAGACGACGGCACTaGATTAGCTTTAACATGTGCGTGATGGTGAATAAT +
Preference number: 3 (lower is better)
Translates to: PVLHHSPGRRRH*ISFNMCVMVNN
Trigger: ATTATTCACCATCACGCACATGTTAAAGCTAATTCAGTGCCGTCGTCTTCCAGGGGAGTGATGTAGAACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR TCA 72 bp ATCATGGAATGTTGCAGCACTGAGAACTTGAGAAGATaGGGAGGAGCCAATCTGGGTTTCAGCTTTAACACC +
Preference number: 3 (lower is better)
Translates to: IMECCSTENLRR*GGANLGFSFNT
Trigger: GGTGTTAAAGCTGAAACCCAGATTGGCTCCTCCTCATCTTCTCAAGTTCTCAGTGCTGCAACATTCCATGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR TCA 72 bp AAGACGAAATCATGGAATGTTGCAGCACTGAGAACTTaGGAAGATGAGGAGGAGCCAATCTGGGTTTCAGCT +
Preference number: 3 (lower is better)
Translates to: KTKSWNVAALRT*EDEEEPIWVSA
Trigger: AGCTGAAACCCAGATTGGCTCCTCCTCATCTTCTCAAGTTCTCAGTGCTGCAACATTCCATGATTTCGTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CAA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTGCCATAAAAGATTGGTaGGATCAGGTGTGCCATTTG +
Preference number: 3 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPAIKDW*DQVCHL
Trigger: CAAATGGCACACCTGATCCAACCAATCTTTTATGGC...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CAA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCAGATGCTGGTCATTCTTaGCATTTAAAGCTAGTCTTG +
Preference number: 3 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSDAGHS*HLKLVL
Trigger: CAAGACTAGCTTTAAATGCAAAGAATGACCAGCATC...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CAA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACAGGCAGGAGAATCACTaGAATCCGGGAGGTGGAGGT +
Preference number: 3 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYRQENH*NPGGGG
Trigger: ACCTCCACCTCCCGGATTCAAGTGATTCTCCTGCCT...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CAA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAAACAGACACATGCACATaGGCCTGGGGCTGCAGATTA +
Preference number: 3 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQTDTCT*AWGCRL
Trigger: TAATCTGCAGCCCCAGGCCAATGTGCATGTGTCTGT...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR GCA 72 bp TTATTCAAGGAAGCATGCTCAGTGCTCATCAGTAAATaGCTGGAGTGTTGGGTGCATTCTTGTGTCTCACAA +
Preference number: 3 (lower is better)
Translates to: LFKEACSVLISK*LECWVHSCVSQ
Trigger: TTGTGAGACACAAGAATGCACCCAACACTCCAGGCATTTACTGATGAGCACTGAGCATGCTTCCTTGAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR GCA 72 bp GTGGGAGCCCAGAGGGAATATTATTTTAGGTGGAACTaGTCTGGATTTAGGTATCATGCCGAGGATGAAATA +
Preference number: 3 (lower is better)
Translates to: VGAQREYYFRWN*SGFRYHAEDEI
Trigger: TATTTCATCCTCGGCATGATACCTAAATCCAGAGCAGTTCCACCTAAAATAATATTCCCTCTGGGCTCCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CAA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTGGTGATGCTTCTATATaGTCAAGGAAAGCCAAAGAC +
Preference number: 3 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPGDASI*SRKAKD
Trigger: GTCTTTGGCTTTCCTTGACAATATAGAAGCATCACC...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CAA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAAATGAGCAAGGACAGCTaGGAGGTTAGAGGCAAGATG +
Preference number: 3 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQMSKDS*EVRGKM
Trigger: CATCTTGCCTCTAACCTCCAAGCTGTCCTTGCTCAT...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CAA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAACCAGCAGGAAGGGAATaGGTTTTGGGAAAGGGCTGT +
Preference number: 3 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKPAGRE*VLGKGC
Trigger: ACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGG...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CAA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAAGGAAGTGTGCCAGAATaGGTGAACGGAAGAGTCCTT +
Preference number: 3 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQGSVPE*VNGRVL
Trigger: AAGGACTCTTCCGTTCACCAATTCTGGCACACTTCC...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR GCA 72 bp TTTAATATGTGTCTTGTGGCTTACAACACAGACACATaGACATTGGCCTGGGGCTGCAGATTATTCAAGGAA +
Preference number: 3 (lower is better)
Translates to: FNMCLVAYNTDT*TLAWGCRLFKE
Trigger: TTCCTTGAATAATCTGCAGCCCCAGGCCAATGTGCATGTGTCTGTGTTGTAAGCCACAAGACACATATTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR GCA 72 bp TCTGGGATTGGGGCTTTTTGTACTAAACCAGGAAAGTaGTGGGCAATTGAGATCAGTTGTTTGCTTTACATG +
Preference number: 3 (lower is better)
Translates to: SGIGAFCTKPGK*WAIEISCLLYM
Trigger: CATGTAAAGCAAACAACTGATCTCAATTGCCCAGCACTTTCCTGGTTTAGTACAAAAAGCCCCAATCCCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR CCA 72 bp GATGCTGGAATAATGGAGTTTTGCCATGTACATAGATaGGAAGATTGTGAGTGGAGAAGGCTGGGAGTAATT +
Preference number: 3 (lower is better)
Translates to: DAGIMEFCHVHR*EDCEWRRLGVI
Trigger: AATTACTCCCAGCCTTCTCCACTCACAATCTTCCCATCTATGTACATGGCAAAACTCCATTATTCCAGCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR CCA 72 bp GGGATTGGGGCTTTTTGTACTAAACCAGGAAAGTGCTaGGCAATTGAGATCAGTTGTTTGCTTTACATGAAG +
Preference number: 3 (lower is better)
Translates to: GIGAFCTKPGKC*AIEISCLLYMK
Trigger: CTTCATGTAAAGCAAACAACTGATCTCAATTGCCCAGCACTTTCCTGGTTTAGTACAAAAAGCCCCAATCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CAA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACCACGAGGTCAGGAGATaGAGACCATCATGGCTAACA +
Preference number: 3 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYHEVRR*RPSWLT
Trigger: TGTTAGCCATGATGGTCTCAATCTCCTGACCTCGTG...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CAA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAACACGAGGTCAGGAGATaGAGACCATCATGGCTAACA +
Preference number: 3 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKHEVRR*RPSWLT
Trigger: TGTTAGCCATGATGGTCTCAATCTCCTGACCTCGTG...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CAA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAAATGAGCAAGGACAGCTaGGAGGTTAGAGGCAAGATG +
Preference number: 3 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKMSKDS*EVRGKM
Trigger: CATCTTGCCTCTAACCTCCAAGCTGTCCTTGCTCAT...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CAA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAAGTCCCCAGAAGCAATTaGGGGAGGTTCAGAATCTTG +
Preference number: 3 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKVPRSN*GRFRIL
Trigger: CAAGATTCTGAACCTCCCCAAATTGCTTCTGGGGAC...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CAA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACGTCCCCAGAAGCAATTaGGGGAGGTTCAGAATCTTG +
Preference number: 3 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYVPRSN*GRFRIL
Trigger: CAAGATTCTGAACCTCCCCAAATTGCTTCTGGGGAC...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CAA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACAGCTTCCAAGTGGAGTaGTCTAAGAGGCAGTTGGGT +
Preference number: 3 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYSFQVE*SKRQLG
Trigger: ACCCAACTGCCTCTTAGACAACTCCACTTGGAAGCT...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR GCA 72 bp CCAGGTCAGATGATTTCTGTGGCAGTTACTCATATCTaGTCTTGTAACATGAAAGCAGCCACAGATAATATG +
Preference number: 3 (lower is better)
Translates to: PGQMISVAVTHI*SCNMKAATDNM
Trigger: CATATTATCTGTGGCTGCTTTCATGTTACAAGAGCAGATATGAGTAACTGCCACAGAAATCATCTGACCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CAA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAATTGCTGTACACATGGTaGACAAAGAAAAGGAAGAGG +
Preference number: 3 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQLLYTW*TKKRKR
Trigger: CCTCTTCCTTTTCTTTGTCAACCATGTGTACAGCAA...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CAA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACGCCATAAAAGATTGGTaGGATCAGGTGTGCCATTTG +
Preference number: 3 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYAIKDW*DQVCHL
Trigger: CAAATGGCACACCTGATCCAACCAATCTTTTATGGC...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CAA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAAGGTGATGCTTCTATATaGTCAAGGAAAGCCAAAGAC +
Preference number: 3 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQGDASI*SRKAKD
Trigger: GTCTTTGGCTTTCCTTGACAATATAGAAGCATCACC...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CAA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACTCTATGTCAGAGATTTaGCTACACAGAGGGGGTATG +
Preference number: 3 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYSMSEI*LHRGGM
Trigger: CATACCCCCTCTGTGTAGCAAAATCTCTGACATAGA...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CAA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAACTCAGCGATGATTTTTaGCAAAGGCAGTTTCAGCAT +
Preference number: 3 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQLSDDF*QRQFQH
Trigger: ATGCTGAAACTGCCTTTGCAAAAAATCATCGCTGAG...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CAA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAATGTCTACACAAAAATTaGTACACAAGGCTGGGCATG +
Preference number: 3 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQCLHKN*YTRLGM
Trigger: CATGCCCAGCCTTGTGTACAAATTTTTGTGTAGACA...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CAA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAAAACACTCCTACATTGTaGGTGGAGATGAAAATGGTG +
Preference number: 3 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQNTPTL*VEMKMV
Trigger: CACCATTTTCATCTCCACCAACAATGTAGGAGTGTT...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CAA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAAAAAGTATGTGTGAAATaGGGCCATAGCACCTTACCT +
Preference number: 3 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQKVCVK*GHSTLP
Trigger: AGGTAAGGTGCTATGGCCCAATTTCACACATACTTT...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CAA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAAGAAAGTGCTGGGCAATaGAGATCAGTTGTTTGCTTT +
Preference number: 3 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQESAGQ*RSVVCF
Trigger: AAAGCAAACAACTGATCTCAATTGCCCAGCACTTTC...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR TCA 72 bp TTTCTGTGGCAGTTACTCATATCTGCTCTTGTAACATaGAAGCAGCCACAGATAATATGTACACAAGTGGGT +
Preference number: 3 (lower is better)
Translates to: FLWQLLISALVT*KQPQIICTQVG
Trigger: ACCCACTTGTGTACATATTATCTGTGGCTGCTTTCATGTTACAAGAGCAGATATGAGTAACTGCCACAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CAA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAATTGCTGTACACATGGTaGACAAAGAAAAGGAAGAGG +
Preference number: 3 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKLLYTW*TKKRKR
Trigger: CCTCTTCCTTTTCTTTGTCAACCATGTGTACAGCAA...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CAA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAAGGTGATGCTTCTATATaGTCAAGGAAAGCCAAAGAC +
Preference number: 3 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKGDASI*SRKAKD
Trigger: GTCTTTGGCTTTCCTTGACAATATAGAAGCATCACC...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CAA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACATAAGAAGGGGAAATTaGGACACAGACACACCTAGA +
Preference number: 3 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYIRRGN*DTDTPR
Trigger: TCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTAT...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CAA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAAGATGCTGGTCATTCTTaGCATTTAAAGCTAGTCTTG +
Preference number: 3 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQDAGHS*HLKLVL
Trigger: CAAGACTAGCTTTAAATGCAAAGAATGACCAGCATC...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CAA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACACAGAAATGGGCAATTaGGGATGCTGGTCATTCTTT +
Preference number: 3 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYTEMGN*GCWSFF
Trigger: AAAGAATGACCAGCATCCCAAATTGCCCATTTCTGT...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CAA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAATGTCTACACAAAAATTaGTACACAAGGCTGGGCATG +
Preference number: 3 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKCLHKN*YTRLGM
Trigger: CATGCCCAGCCTTGTGTACAAATTTTTGTGTAGACA...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR GCA 72 bp AGGCGTCATAGTCTACAGAAATGTGAGACAATCAATTaGTATTGTTTAACTCACCCAATTTGTGGCACATTG +
Preference number: 3 (lower is better)
Translates to: RRHSLQKCETIN*YCLTHPICGTL
Trigger: CAATGTGCCACAAATTGGGTGAGTTAAACAATAGCAATTGATTGTCTCACATTTCTGTAGACTATGACGCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CAA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACGATGCTGGTCATTCTTaGCATTTAAAGCTAGTCTTG +
Preference number: 3 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYDAGHS*HLKLVL
Trigger: CAAGACTAGCTTTAAATGCAAAGAATGACCAGCATC...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CAA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAAAATGACAGTTCAATATaGTCCTCATTTTCCAGGAGA +
Preference number: 3 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQNDSSI*SSFSRR
Trigger: TCTCCTGGAAAATGAGGACAATATTGAACTGTCATT...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR CCA 72 bp ATGTGCGTGATGGTGAATAATGACATAATCTTACAATaGCGACTTCACATAAGGGTGTTACTCAAAATCTCT +
Preference number: 3 (lower is better)
Translates to: MCVMVNNDIILQ*RLHIRVLLKIS
Trigger: AGAGATTTTGAGTAACACCCTTATGTGAAGTCGCCATTGTAAGATTATGTCATTATTCACCATCACGCACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR CCA 72 bp TGGAATGGTAGAGGATTCACAATAGTCAAAGAATCTTaGAAAAGAAGAACCAACTTGAAGACTCACATTTCC +
Preference number: 3 (lower is better)
Translates to: WNGRGFTIVKES*KRRTNLKTHIS
Trigger: GGAAATGTGAGTCTTCAAGTTGGTTCTTCTTTTCCAAGATTCTTTGACTATTGTGAATCCTCTACCATTCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CAA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACCTACAAATTCATATGTaGAAGTCCTTACCGCCAAAA +
Preference number: 3 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYLQIHM*KSLPPK
Trigger: TTTTGGCGGTAAGGACTTCAACATATGAATTTGTAG...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CAA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAACTACAAATTCATATGTaGAAGTCCTTACCGCCAAAA +
Preference number: 3 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKLQIHM*KSLPPK
Trigger: TTTTGGCGGTAAGGACTTCAACATATGAATTTGTAG...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CAA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAAGTTTTAAAGAATAATTaGGTGGGTAGGAGTTGGGAA +
Preference number: 3 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKVLKNN*VGRSWE
Trigger: TTCCCAACTCCTACCCACCAAATTATTCTTTAAAAC...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CAA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACGTTTTAAAGAATAATTaGGTGGGTAGGAGTTGGGAA +
Preference number: 3 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYVLKNN*VGRSWE
Trigger: TTCCCAACTCCTACCCACCAAATTATTCTTTAAAAC...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR-3UTR CAA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACTGTTTAATATGTGTCTaGTGGCTTACAACACAGACA +
Preference number: 3 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYCLICV*WLTTQT
Trigger: TGTCTGTGTTGTAAGCCACAAGACACATATTAAACA...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR TCA 72 bp TGTGGTATGGGCATAAGGATTAGACATATAGCCCGATaGAATAGAATCAAGAGTACAGAAATAAACTCTTAC +
Preference number: 3 (lower is better)
Translates to: CGMGIRIRHIAR*NRIKSTEINSY
Trigger: GTAAGAGTTTATTTCTGTACTCTTGATTCTATTTCATCGGGCTATATGTCTAATCCTTATGCCCATACCACA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR CAA 72 bp GTTGAACATGACTGGTCCCCAGCTAGCCCTTTTCTATaGGCGCAGCAGCCGGCATTCACTCATGCAAGCTTC +
Preference number: 4 (lower is better)
Translates to: VEHDWSPASPFL*AQQPAFTHASF
Trigger: GAAGCTTGCATGAGTGAATGCCGGCTGCTGCGCCAATAGAAAAGGGCTAGCTGGGGACCAGTCATGTTCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR GCA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCACCAAGAAGGCGCCATTaGACTCCAGCCTGGGCAACG +
Preference number: 4 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSPRRRH*TPAWAT
Trigger: CGTTGCCCAGGCTGGAGTGCAATGGCGCCTTCTTGG...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCACAACCCAGGGGTGCCTaGGGGACAACAGCAGATGAA +
Preference number: 4 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSQPRGA*GTTADE
Trigger: TTCATCTGCTGTTGTCCCTCAGGCACCCCTGGGTTG...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTGATCTCCTCACCTTGTaGTCCACCCGCCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPDLLTL*STRLGL
Trigger: GAGGCCGAGGCGGGTGGATCACAAGGTGAGGAGATC...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCAGCTGTCCTTTTGTGCTaGGTCAGTTCCTGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSAVLLC*VSSWEG
Trigger: CCCCTCCCAGGAACTGACTCAGCACAAAAGGACAGC...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCAAGGTGGAGGTTGCAGTaGGCCAAGAAGGCGCCATTG +
Preference number: 4 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSRWRLQ*AKKAPL
Trigger: CAATGGCGCCTTCTTGGCTCACTGCAACCTCCACCT...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR GCA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCACTGAGAGGTGGAGGTTaGAGTGAGCCAAGAAGGCGC +
Preference number: 4 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSLRGGG*SEPRRR
Trigger: GCGCCTTCTTGGCTCACTGCAACCTCCACCTCTCAG...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR GCA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCAGGAAGAAGACTGGGATaGGGACACACCAGAGTGAGG +
Preference number: 4 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSGRRLG*GHTRVR
Trigger: CCTCACTCTGGTGTGTCCGCATCCCAGTCTTCTTCC...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR GCA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCATGGGTTCACCTTGCCTaGTGCCTAGACAGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSWVHLA*CLDRAA
Trigger: AGCAGCTCTGTCTAGGCAGCAGGCAAGGTGAACCCA...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR CAA 72 bp CGCAGCAGCCGGCATTCACTCATGCAAGCTTCCAGCTaGCTTATCTATGTCTGCAGCTCGATTTTTCAGGCT +
Preference number: 4 (lower is better)
Translates to: RSSRHSLMQASS*LIYVCSSIFQA
Trigger: AGCCTGAAAAATCGAGCTGCAGACATAGATAAGCAAGCTGGAAGCTTGCATGAGTGAATGCCGGCTGCTGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTCAACCCAGGGGTGCCTaGGGGACAACAGCAGATGAA +
Preference number: 4 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPQPRGA*GTTADE
Trigger: TTCATCTGCTGTTGTCCCTCAGGCACCCCTGGGTTG...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCAGCAATGGGAGTTAGCTaGGCATGCTCTACGGATCAG +
Preference number: 4 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSAMGVS*ACSTDQ
Trigger: CTGATCCGTAGAGCATGCTCAGCTAACTCCCATTGC...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCAGCAGCACTGAGAACTTaGGAAGATGAGGAGGAGCCA +
Preference number: 4 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSAALRT*EDEEEP
Trigger: TGGCTCCTCCTCATCTTCTCAAGTTCTCAGTGCTGC...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTAGGTGGAGGTTGCAGTaGGCCAAGAAGGCGCCATTG +
Preference number: 4 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPRWRLQ*AKKAPL
Trigger: CAATGGCGCCTTCTTGGCTCACTGCAACCTCCACCT...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR GCA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTTTGCCCAGGCTGGAGTaGAATGGCCCGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPLPRLE*NGPISA
Trigger: AGCTGAGATCGGGCCATTGCACTCCAGCCTGGGCAA...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR GCA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTCTCGGCCTCCCAAAGTaGTCAGGTTACAGGCGTGAG +
Preference number: 4 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPLGLPK*SGYRRE
Trigger: CTCACGCCTGTAACCTGAGCACTTTGGGAGGCCGAG...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CCA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCACAGGGGCTGGTTCTCTaGAGTGGATGGACATTTCAG +
Preference number: 4 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSQGLVL*SGWTFQ
Trigger: CTGAAATGTCCATCCACTCCAGAGAACCAGCCCCTG...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAAGGCAGGGCAAGGGGGTaGGTGTCAGGGGCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQGRARG*VSGAGS
Trigger: AGAACCAGCCCCTGACACCCACCCCCTTGCCCTGCC...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CCA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCACCATGTTCGTCAGGCTaGTGTCAAACTCCTGACCTC +
Preference number: 4 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSPCSSG*CQTPDL
Trigger: GAGGTCAGGAGTTTGACACCAGCCTGACGAACATGG...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CCA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCACCATGTCAGCCAGGATaGTCTCGATCTCCTCACCTT +
Preference number: 4 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSPCQPG*SRSPHL
Trigger: AAGGTGAGGAGATCGAGACCATCCTGGCTGACATGG...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CCA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCATTGGTGGGTAGGAGTTaGGAAGTGGGGAGTGCTGAT +
Preference number: 4 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSLVGRS*EVGSAD
Trigger: ATCAGCACTCCCCACTTCCCAACTCCTACCCACCAA...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR CAA 72 bp CTACGAAGGCAGTCTAGTCTCCCAGCAGGAAGGGAATaGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTC +
Preference number: 4 (lower is better)
Translates to: LRRQSSLPAGRE*VLGKGCYRLCF
Trigger: GAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGAGACTAGACTGCCTTCGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCAATTGATGGTGGAGACTaGAGCTCTGCTCAGCAGACT +
Preference number: 4 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSIDGGD*SSAQQT
Trigger: AGTCTGCTGAGCAGAGCTTCAGTCTCCACCATCAAT...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCAGCCCGGCCAACTGCGTaGCTTTTAAACCATAGTTTC +
Preference number: 4 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSARPTA*LLNHSF
Trigger: GAAACTATGGTTTAAAAGTCACGCAGTTGGCCGGGC...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR GCA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTTTGACCTTCCCTCCTTaGACAATCGGTGCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPLTFPP*TIGAGR
Trigger: CCTGCCTGCACCGATTGTGCAAGGAGGGAAGGTCAA...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR GCA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCAATGAAGTTAAGCTTCTaGTTGGGGCCTGGAAGGGTG +
Preference number: 4 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSMKLSF*LGPGRV
Trigger: CACCCTTCCAGGCCCCAAGCAGAAGCTTAACTTCAT...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR GCA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTGGAAGAAGACTGGGATaGGGACACACCAGAGTGAGG +
Preference number: 4 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPGRRLG*GHTRVR
Trigger: CCTCACTCTGGTGTGTCCGCATCCCAGTCTTCTTCC...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR GCA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTCCAATGGGTTCACCTTaGCTGCTGCCTAGACAGAGC +
Preference number: 4 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPPMGSP*LLPRQS
Trigger: GCTCTGTCTAGGCAGCAGGCAAGGTGAACCCATTGG...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CCA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCAGCACCTTACCTGCAATaGGAGTTAGCTGAGCATGCT +
Preference number: 4 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSAPYLQ*ELAEHA
Trigger: AGCATGCTCAGCTAACTCCCATTGCAGGTAAGGTGC...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CCA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCACAGACACAAACAAGCTaGGAGCTTGCACGGGTGAAT +
Preference number: 4 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSQTQTS*ELARVN
Trigger: ATTCACCCGTGCAAGCTCCCAGCTTGTTTGTGTCTG...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641666.1
ENST00000642030.1
CDS-3UTR TCA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCATCTTGGGCATGTGTTTaGTTTCCTGTTTCCATGGGG +
Preference number: 4 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSSWACV*FPVSMG
Trigger: CCCCATGGAAACAGGAAATCAAACACATGCCCAAGA...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCAGTGCTTTCTCCCAGCTaGGGAAATCCTCAGTATAGA +
Preference number: 4 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSVLSPS*GNPQYR
Trigger: TCTATACTGAGGATTTCCTCAGCTGGGAGAAAGCAC...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAATTGGTCTGGGGCTGGTaGACTGCAGGTGGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQLVWGW*TAGGFR
Trigger: CCTGAACCCACCTGCAGTTCACCAGCCCCAGACCAA...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641666.1
ENST00000642000.1
CDS-3UTR TCA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTTGGACTTGGCTCTGTTaGCCTTCCCTCCTTGCACAA +
Preference number: 4 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPWTWLC*PSLLAQ
Trigger: TTGTGCAAGGAGGGAAGGTCAACAGAGCCAAGTCCA...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTGGTAGGGAGCTCAGGTaGCCTGGTTTTCCTGTAACT +
Preference number: 4 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPGRELR*PGFPVT
Trigger: AGTTACAGGAAAACCAGGTCACCTGAGCTCCCTACC...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACGATCTCCTCACCTTGTaGTCCACCCGCCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYDLLTL*STRLGL
Trigger: GAGGCCGAGGCGGGTGGATCACAAGGTGAGGAGATC...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTGCAGCACTGAGAACTTaGGAAGATGAGGAGGAGCCA +
Preference number: 4 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPAALRT*EDEEEP
Trigger: TGGCTCCTCCTCATCTTCTCAAGTTCTCAGTGCTGC...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCAGGAATGTTGCAGCACTaGGAACTTGAGAAGATGAGG +
Preference number: 4 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSGMLQH*ELEKMR
Trigger: CCTCATCTTCTCAAGTTCTCAGTGCTGCAACATTCC...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR GCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACCTGGGGCTGGTGAACTaGAGGTGGGTTCAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYLGLVN*RWVQEG
Trigger: CCCCTCCTGAACCCACCTGCAGTTCACCAGCCCCAG...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641666.1
ENST00000642000.1
CDS-3UTR GCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAACTGGGGCTGGTGAACTaGAGGTGGGTTCAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKLGLVN*RWVQEG
Trigger: CCCCTCCTGAACCCACCTGCAGTTCACCAGCCCCAG...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000641666.1
ENST00000642000.1
CDS-3UTR GCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAATCCTTGCACAATCGGTaGAGGCAGGGCAAGGGGGTG +
Preference number: 4 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQSLHNR*RQGKGV
Trigger: CACCCCCTTGCCCTGCCTGCACCGATTGTGCAAGGA...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR GCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAACCGATCTCAGCTCACTaGAACCTCCGCCTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKPISAH*NLRLPG
Trigger: ACCCGGGAGGCGGAGGTTGCAGTGAGCTGAGATCGG...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR GCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACCCGATCTCAGCTCACTaGAACCTCCGCCTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYPISAH*NLRLPG
Trigger: ACCCGGGAGGCGGAGGTTGCAGTGAGCTGAGATCGG...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR GCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAAAGCTGGGACAACAGGTaGCCACCACCACGCCCGTCT +
Preference number: 4 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKSWDNR*PPPRPS
Trigger: AGACGGGCGTGGTGGTGGGCACCTGTTGTCCCAGCT...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR GCA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCAGCCTGGAGTGTTGGGTaGATTCTTGTGTCTCACAAT +
Preference number: 4 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSAWSVG*ILVSHN
Trigger: ATTGTGAGACACAAGAATGCACCCAACACTCCAGGC...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR GCA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCAAGGAAGCATGCTCAGTaGTCATCAGTAAATGCCTGG +
Preference number: 4 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSRKHAQ*SSVNAW
Trigger: CCAGGCATTTACTGATGAGCACTGAGCATGCTTCCT...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR GCA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCAACATTGGCCTGGGGCTaGAGATTATTCAAGGAAGCA +
Preference number: 4 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSTLAWG*RLFKEA
Trigger: TGCTTCCTTGAATAATCTGCAGCCCCAGGCCAATGT...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CCA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCACATGTTGAACATGACTaGTCCCCAGCTAGCCCTTTT +
Preference number: 4 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSHVEHD*SPASPF
Trigger: AAAAGGGCTAGCTGGGGACCAGTCATGTTCAACATG...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CCA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTTTCGGGAGGTTGAGGTaGGAGAATGGCATGAACTCG +
Preference number: 4 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPFGRLR*ENGMNS
Trigger: CGAGTTCATGCCATTCTCCCACCTCAACCTCCCGAA...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CCA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCAGAGGAGGAGCCAATCTaGGTTTCAGCTTTAACACCA +
Preference number: 4 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSEEEPI*VSALTP
Trigger: TGGTGTTAAAGCTGAAACCCAGATTGGCTCCTCCTC...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAATTGGTCTGGGGCTGGTaGACTGCAGGTGGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKLVWGW*TAGGFR
Trigger: CCTGAACCCACCTGCAGTTCACCAGCCCCAGACCAA...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000641666.1
ENST00000642000.1
CDS-3UTR TCA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCATACTCTGGCTTCTCTTaGTATCCCTCAATGGACTTG +
Preference number: 4 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSYSGFS*YPSMDL
Trigger: CAAGTCCATTGAGGGATATCAAGAGAAGCCAGAGTA...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCATCCTGGCTCAGTGAATaGCAGTTCAATATTGTCCTC +
Preference number: 4 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSSWLSE*QFNIVL
Trigger: GAGGACAATATTGAACTGTCATTCACTGAGCCAGGA...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCAAAACAAGCAGCAGGGTaGATTTGGTCTGCATGTTGT +
Preference number: 4 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSKQAAG*IWSACC
Trigger: ACAACATGCAGACCAAATTCACCCTGCTGCTTGTTT...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAAGGTGGGAGAATGGCATaGACTCGGGAGGCGGAGCTT +
Preference number: 4 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKGGRMA*TREAEL
Trigger: AAGCTCCGCCTCCCGAGTTCATGCCATTCTCCCACC...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAAGCTGTCCTTTTGTGCTaGGTCAGTTCCTGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQAVLLC*VSSWEG
Trigger: CCCCTCCCAGGAACTGACTCAGCACAAAAGGACAGC...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTGAGAACTTGAGAAGATaGGGAGGAGCCAATCTGGGT +
Preference number: 4 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPENLRR*GGANLG
Trigger: ACCCAGATTGGCTCCTCCTCATCTTCTCAAGTTCTC...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCACAAGGGATTCTGACTTaGGATGCTGGAATAATGGAG +
Preference number: 4 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSQGILT*DAGIME
Trigger: CTCCATTATTCCAGCATCTCAAGTCAGAATCCCTTG...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR GCA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTAAGAACCACCAAAAGTaGCTCCCAATGGTCCAAGCC +
Preference number: 4 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPKNHQK*LPMVQA
Trigger: GGCTTGGACCATTGGGAGGCACTTTTGGTGGTTCTT...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR GCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAACTCGGCCTCCCAAAGTaGTCAGGTTACAGGCGTGAG +
Preference number: 4 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQLGLPK*SGYRRE
Trigger: CTCACGCCTGTAACCTGAGCACTTTGGGAGGCCGAG...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR GCA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTGCTCTTCATTCAGGCTaGATTTCCCAGGAACTTGCC +
Preference number: 4 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPALHSG*ISQELA
Trigger: GGCAAGTTCCTGGGAAATGCAGCCTGAATGAAGAGC...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642030.1
CDS-3UTR CCA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCAGCTAGGGGTAAGGCATaGAACAGAATCTTTCTCACA +
Preference number: 4 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSARGKA*NRIFLT
Trigger: TGTGAGAAAGATTCTGTTCCATGCCTTACCCCTAGC...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CCA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCAAAATCTAACTTAGGCTaGGTGCTGTGGCTCATGCTT +
Preference number: 4 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSKSNLG*VLWLML
Trigger: AAGCATGAGCCACAGCACCCAGCCTAAGTTAGATTT...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CCA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTTCTACATCACTCCCCTaGAAGACGACGGCACTGAAT +
Preference number: 4 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPSTSLP*KTTALN
Trigger: ATTCAGTGCCGTCGTCTTCCAGGGGAGTGATGTAGA...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CCA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCATGTCTAAGAGGCAGTTaGGTCTATGAATCTGGAGTC +
Preference number: 4 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSCLRGS*VYESGV
Trigger: GACTCCAGATTCATAGACCCAACTGCCTCTTAGACA...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR CAA 72 bp TTATACAGATGGGTTCTTTACCTGGGCAGCCCCATGTaGCCTGTTCCTTTGCTGTACACATGGTTGACAAAG +
Preference number: 4 (lower is better)
Translates to: LYRWVLYLGSPM*PVPLLYTWLTK
Trigger: CTTTGTCAACCATGTGTACAGCAAAGGAACAGGCAACATGGGGCTGCCCAGGTAAAGAACCCATCTGTATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR CAA 72 bp GAAGATGAAAGCAGAGATTGGGGTGATGCTTCTATATaGTCAAGGAAAGCCAAAGACTGCCAGCAACCGGCA +
Preference number: 4 (lower is better)
Translates to: EDESRDWGDASI*SRKAKDCQQPA
Trigger: TGCCGGTTGCTGGCAGTCTTTGGCTTTCCTTGACAATATAGAAGCATCACCCCAATCTCTGCTTTCATCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR CAA 72 bp AGGCAGTCTAGTCTCCCAGCAGGAAGGGAATTGGTTTaGGGAAAGGGCTGTTACCGTCTTTGTTTCAAAGTT +
Preference number: 4 (lower is better)
Translates to: RQSSLPAGRELV*GKGCYRLCFKV
Trigger: AACTTTGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGAGACTAGACTGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCACCAAAGAGAATGAACTaGATCTCTGACGTTGCTGAA +
Preference number: 4 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSPKRMN*ISDVAE
Trigger: TTCAGCAACGTCAGAGATTCAGTTCATTCTCTTTGG...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTGTGCTTTCTCCCAGCTaGGGAAATCCTCAGTATAGA +
Preference number: 4 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPVLSPS*GNPQYR
Trigger: TCTATACTGAGGATTTCCTCAGCTGGGAGAAAGCAC...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCAAAGCAGAGATTGGGGTaGTGCTTCTATATTGTCAAG +
Preference number: 4 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSKQRLG*CFYIVK
Trigger: CTTGACAATATAGAAGCATCACCCCAATCTCTGCTT...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAAGTTAGAGCCCAGGAATaGGCAAGGACAGCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQVRAQE*ARTAWR
Trigger: CCTCCAAGCTGTCCTTGCTCATTCCTGGGCTCTAAC...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTAGGCAGTTGGGTCTATaGATCTGGAGTCATCTTGTC +
Preference number: 4 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPRQLGL*IWSHLV
Trigger: GACAAGATGACTCCAGATTCATAGACCCAACTGCCT...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR GCA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTGTGGAAAACGCTTTGTaGTTTCTCCCAGCTGAGGAA +
Preference number: 4 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPVENAL*FLPAEE
Trigger: TTCCTCAGCTGGGAGAAAGCACAAAGCGTTTTCCAC...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR GCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAACATTCAACCCAGGGGTaGCTGAGGGACAACAGCAGA +
Preference number: 4 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQHSTQG*LRDNSR
Trigger: TCTGCTGTTGTCCCTCAGGCACCCCTGGGTTGAATG...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR GCA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCAACTAAACCAGGAAAGTaGTGGGCAATTGAGATCAGT +
Preference number: 4 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSTKPGK*WAIEIS
Trigger: ACTGATCTCAATTGCCCAGCACTTTCCTGGTTTAGT...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR GCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAATTGCCCAGGCTGGAGTaGAATGGCCCGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKLPRLE*NGPISA
Trigger: AGCTGAGATCGGGCCATTGCACTCCAGCCTGGGCAA...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR GCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACCTCGGCCTCCCAAAGTaGTCAGGTTACAGGCGTGAG +
Preference number: 4 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYLGLPK*SGYRRE
Trigger: CTCACGCCTGTAACCTGAGCACTTTGGGAGGCCGAG...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR GCA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTGTGCTCATCAGTAAATaGCTGGAGTGTTGGGTGCAT +
Preference number: 4 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPVLISK*LECWVH
Trigger: ATGCACCCAACACTCCAGGCATTTACTGATGAGCAC...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR GCA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTACATTGGCCTGGGGCTaGAGATTATTCAAGGAAGCA +
Preference number: 4 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPTLAWG*RLFKEA
Trigger: TGCTTCCTTGAATAATCTGCAGCCCCAGGCCAATGT...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR GCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACCTGGGGCTGGTGAACTaGAGGTGGGTTCTGTTCTCC +
Preference number: 4 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYLGLVN*RWVLFS
Trigger: GGAGAACAGAACCCACCTGCAGTTCACCAGCCCCAG...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000642030.1
CDS-3UTR CCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAACTGGTGAACTGCAGGTaGGTTCAGGAGGGGATCTCT +
Preference number: 4 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQLVNCR*VQEGIS
Trigger: AGAGATCCCCTCCTGAACCCACCTGCAGTTCACCAG...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641666.1
ENST00000642000.1
CDS-3UTR CCA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCAAACATTGGTAGTCAGTaGCAGATATCATGGCACTTC +
Preference number: 4 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSNIGSQ*QISWHF
Trigger: GAAGTGCCATGATATCTGCCACTGACTACCAATGTT...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CCA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTCATGTTGAACATGACTaGTCCCCAGCTAGCCCTTTT +
Preference number: 4 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPHVEHD*SPASPF
Trigger: AAAAGGGCTAGCTGGGGACCAGTCATGTTCAACATG...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CCA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTCAGCAGGAAGGGAATTaGTTTTGGGAAAGGGCTGTT +
Preference number: 4 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPQQEGN*FWERAV
Trigger: AACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTG...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACCAAGCTCTGCCTCCCTaGTTCACGCCATTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYQALPP*FTPFSC
Trigger: GCAGGAGAATGGCGTGAACCAGGGAGGCAGAGCTTG...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CCA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTACATGCACATTGGCCTaGGGCTGCAGATTATTCAAG +
Preference number: 4 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPTCTLA*GCRLFK
Trigger: CTTGAATAATCTGCAGCCCCAGGCCAATGTGCATGT...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CCA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCATGCCATGTACATAGATaGGAAGATTGTGAGTGGAGA +
Preference number: 4 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSCHVHR*EDCEWR
Trigger: TCTCCACTCACAATCTTCCCATCTATGTACATGGCA...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CCA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCAATCAAGGGTTTACTCTaGCTTCTCTTGATATCCCTC +
Preference number: 4 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSIKGLL*LLLISL
Trigger: GAGGGATATCAAGAGAAGCCAGAGTAAACCCTTGAT...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641666.1
ENST00000642030.1
CDS-3UTR TCA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTTCAAGCATCTGTCTCTaGGCTAGACTTAGGACTTCA +
Preference number: 4 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPSSICL*ARLRTS
Trigger: TGAAGTCCTAAGTCTAGCTCAGAGACAGATGCTTGA...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAATGGACTTGGCTCTGTTaGCCTTCCCTCCTTGCACAA +
Preference number: 4 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQWTWLC*PSLLAQ
Trigger: TTGTGCAAGGAGGGAAGGTCAACAGAGCCAAGTCCA...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCAATACTCCTGGCTCAGTaGATGACAGTTCAATATTGT +
Preference number: 4 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSILLAQ*MTVQYC
Trigger: ACAATATTGAACTGTCATTCACTGAGCCAGGAGTAT...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCATTTAGAAAAGGAGGTTaGAGCAGAGGACTTAATCCA +
Preference number: 4 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSFRKGG*SRGLNP
Trigger: TGGATTAAGTCCTCTGCTTCAACCTCCTTTTCTAAA...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCAATGAAGGTCCTGGACTaGACAATAATTTCCTCTCTT +
Preference number: 4 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSMKVLD*TIISSL
Trigger: AAGAGAGGAAATTATTGTTCAGTCCAGGACCTTCAT...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCAAAAGTGCTGGGCAATTaGGATCAGTTGTTTGCTTTA +
Preference number: 4 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSKVLGN*DQLFAL
Trigger: TAAAGCAAACAACTGATCTCAATTGCCCAGCACTTT...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTTTTAGAAAAGGAGAGTaGAGAACATGGGGCATGCAG +
Preference number: 4 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPFRKGE*RTWGMQ
Trigger: CTGCATGCCCCATGTTCTTCACTCTCCTTTTCTAAA...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTAAACAAGCAGCAGGGTaGATTTGGTCTGCATGTTGT +
Preference number: 4 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPKQAAG*IWSACC
Trigger: ACAACATGCAGACCAAATTCACCCTGCTGCTTGTTT...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCAACAACAACTCAACTCTaGCATTGTAGGTTGAAAGCA +
Preference number: 4 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSTTTQL*HCRLKA
Trigger: TGCTTTCAACCTACAATGTCAGAGTTGAGTTGTTGT...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACGGCAGGAGAATCACTTaGATCCGGGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYGRRIT*IREVEV
Trigger: AACCTCCACCTCCCGGATTCAAGTGATTCTCCTGCC...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACGTTAGAGCCCAGGAATaGGCAAGGACAGCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYVRAQE*ARTAWR
Trigger: CCTCCAAGCTGTCCTTGCTCATTCCTGGGCTCTAAC...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAAGCAGCACTGAGAACTTaGGAAGATGAGGAGGAGCCA +
Preference number: 4 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQAALRT*EDEEEP
Trigger: TGGCTCCTCCTCATCTTCTCAAGTTCTCAGTGCTGC...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR GCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACCATTCAACCCAGGGGTaGCTGAGGGACAACAGCAGA +
Preference number: 4 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYHSTQG*LRDNSR
Trigger: TCTGCTGTTGTCCCTCAGGCACCCCTGGGTTGAATG...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR GCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAACATTCAACCCAGGGGTaGCTGAGGGACAACAGCAGA +
Preference number: 4 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKHSTQG*LRDNSR
Trigger: TCTGCTGTTGTCCCTCAGGCACCCCTGGGTTGAATG...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR GCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACTTGACCTTCCCTCCTTaGACAATCGGTGCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYLTFPP*TIGAGR
Trigger: CCTGCCTGCACCGATTGTGCAAGGAGGGAAGGTCAA...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR GCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAATTGACCTTCCCTCCTTaGACAATCGGTGCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKLTFPP*TIGAGR
Trigger: CCTGCCTGCACCGATTGTGCAAGGAGGGAAGGTCAA...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR GCA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTCGGCCTCGCTATGTCTaGCATTTTCAATATTCAGAG +
Preference number: 4 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPRPRYV*HFQYSE
Trigger: CTCTGAATATTGAAAATGGCAGACATAGCGAGGCCG...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR GCA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTTGCAAGCTTCCAGCTTaGTTATCTATGTCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPCKLPA*LSMSAA
Trigger: AGCTGCAGACATAGATAAGCAAGCTGGAAGCTTGCA...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR GCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAAGAGAAGAGCTCTATGTaGAGAGAGGGGTCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQEKSSM*REGSQR
Trigger: TCTCTGGGACCCCTCTCTGCACATAGAGCTCTTCTC...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR GCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAAGGAAGAAGACTGGGATaGGGACACACCAGAGTGAGG +
Preference number: 4 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKGRRLG*GHTRVR
Trigger: CCTCACTCTGGTGTGTCCGCATCCCAGTCTTCTTCC...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR GCA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCAAAGAGTTTCTTTAAATaGAGAATCCCTGGTCAGACG +
Preference number: 4 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSKSFFK*RIPGQT
Trigger: CGTCTGACCAGGGATTCTGCATTTAAAGAAACTCTT...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641666.1
ENST00000642030.1
CDS-3UTR GCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAACATTTCCCAGGAACTTaGCAGGAGGGGATCTCTCCG +
Preference number: 4 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKHFPGT*QEGISP
Trigger: CGGAGAGATCCCCTCCTGGCAAGTTCCTGGGAAATG...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000642030.1
CDS-3UTR CCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAACTGGTGAACTGCAGGTaGGTTCAGGAGGGGATCTCT +
Preference number: 4 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKLVNCR*VQEGIS
Trigger: AGAGATCCCCTCCTGAACCCACCTGCAGTTCACCAG...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000641666.1
ENST00000642000.1
CDS-3UTR CCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAACAGGGGCTGGTTCTCTaGAGTGGATGGACATTTCAG +
Preference number: 4 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQQGLVL*SGWTFQ
Trigger: CTGAAATGTCCATCCACTCCAGAGAACCAGCCCCTG...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CCA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCAGTGAAGACAATTCACTaGGGAGAAAGAATGGTCTAT +
Preference number: 4 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSVKTIH*GERMVY
Trigger: ATAGACCATTCTTTCTCCCCAGTGAATTGTCTTCAC...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAACCATGTTCGTCAGGCTaGTGTCAAACTCCTGACCTC +
Preference number: 4 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQPCSSG*CQTPDL
Trigger: GAGGTCAGGAGTTTGACACCAGCCTGACGAACATGG...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CCA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCACCTTTGCTGTACACATaGTTGACAAAGAAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSPLLYT*LTKKRK
Trigger: CTTCCTTTTCTTTGTCAACCATGTGTACAGCAAAGG...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAAGATGGGTTCTTTACCTaGGCAGCCCCATGTTGCCTG +
Preference number: 4 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKDGFFT*AAPCCL
Trigger: CAGGCAACATGGGGCTGCCCAGGTAAAGAACCCATC...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CCA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCACTTTTATTATACAGATaGGTTCTTTACCTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSLLLYR*VLYLGS
Trigger: GCTGCCCAGGTAAAGAACCCATCTGTATAATAAAAG...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAAGGGTCCCAGAGAAAATaGGTTGCCAGTTCCATGGTG +
Preference number: 4 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQGSQRK*VASSMV
Trigger: CACCATGGAACTGGCAACCCATTTTCTCTGGGACCC...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CCA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCATTAACACCAACCAACTaGTACCTGTTTATATCCCTG +
Preference number: 4 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSLTPTN*YLFISL
Trigger: CAGGGATATAAACAGGTACCAGTTGGTTGGTGTTAA...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CCA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCATCTGACTTGAGATGCTaGAATAATGGAGTTTTGCCA +
Preference number: 4 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSSDLRC*NNGVLP
Trigger: TGGCAAAACTCCATTATTCCAGCATCTCAAGTCAGA...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CCA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTCAGATAGTAAGGTTATaGGAGTCCTCAGTGAGGCTT +
Preference number: 4 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPQIVRL*ESSVRL
Trigger: AAGCCTCACTGAGGACTCCCATAACCTTACTATCTG...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641666.1
ENST00000642030.1
CDS-3UTR CCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAACTGGTGAACTGCAGGTaGGTTCTGTTCTCCCAACAG +
Preference number: 4 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQLVNCR*VLFSQQ
Trigger: CTGTTGGGAGAACAGAACCCACCTGCAGTTCACCAG...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642030.1
CDS-3UTR TCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACTGGACTTGGCTCTGTTaGCCTTCCCTCCTTGCACAA +
Preference number: 4 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYWTWLC*PSLLAQ
Trigger: TTGTGCAAGGAGGGAAGGTCAACAGAGCCAAGTCCA...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTTTTTCAACAAGGATGTaGAGACAATTCACTGGGGAG +
Preference number: 4 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPFSTRM*RQFTGE
Trigger: CTCCCCAGTGAATTGTCTTCACATCCTTGTTGAAAA...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCAAGACATATAGCCCGATaGAATAGAATCAAGAGTACA +
Preference number: 4 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSRHIAR*NRIKST
Trigger: TGTACTCTTGATTCTATTTCATCGGGCTATATGTCT...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCAAAAGAAGAACCAACTTaGAGACTCACATTTCCTGAT +
Preference number: 4 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSKEEPT*RLTFPD
Trigger: ATCAGGAAATGTGAGTCTTCAAGTTGGTTCTTCTTT...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAAGCAATGGGAGTTAGCTaGGCATGCTCTACGGATCAG +
Preference number: 4 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKAMGVS*ACSTDQ
Trigger: CTGATCCGTAGAGCATGCTCAGCTAACTCCCATTGC...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTAATCCAAAGTATGTGTaGAATTGGGCCATAGCACCT +
Preference number: 4 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPNPKYV*NWAIAP
Trigger: AGGTGCTATGGCCCAATTTCACACATACTTTGGATT...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTGTTGTTTGCTTTACATaGAGGTCCTGGACTGAACAA +
Preference number: 4 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPVVCFT*RSWTEQ
Trigger: TTGTTCAGTCCAGGACCTTCATGTAAAGCAAACAAC...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACGGTAGGGAGCTCAGGTaGCCTGGTTTTCCTGTAACT +
Preference number: 4 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYGRELR*PGFPVT
Trigger: AGTTACAGGAAAACCAGGTCACCTGAGCTCCCTACC...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAAGGTAGGGAGCTCAGGTaGCCTGGTTTTCCTGTAACT +
Preference number: 4 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKGRELR*PGFPVT
Trigger: AGTTACAGGAAAACCAGGTCACCTGAGCTCCCTACC...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCATCTGACATTGTAGGTTaGAAGCAGCTGTCAATAATA +
Preference number: 4 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSSDIVG*KQLSII
Trigger: TATTATTGACAGCTGCTTTCAACCTACAATGTCAGA...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCAGGTCAATTTTCTTGTTaGATGTCTCATGTTCTGGAT +
Preference number: 4 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSGQFSC*MSHVLD
Trigger: ATCCAGAACATGAGACATTCAACAAGAAAATTGACC...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTAGCAAACCTTCACAGTaGAAAAGGCCAGAGAGTAAA +
Preference number: 4 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPSKPSQ*KRPESK
Trigger: TTTACTCTCTGGCCTTTTTCACTGTGAAGGTTTGCT...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCACTTTTGTCTAAGAAATaGCTAGTGGTTTCATGGAAG +
Preference number: 4 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSLLSKK*LVVSWK
Trigger: CTTCCATGAAACCACTAGTCATTTCTTAGACAAAAG...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTTGTTTATATCCCTGGTaGTCTACTAGTAGCCACATC +
Preference number: 4 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPCLYPW*STSSHI
Trigger: GATGTGGCTACTAGTAGATCACCAGGGATATAAACA...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACGTGTGGCTCTTCTCTTaGGCTCTTCATTCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYVWLFS*ALHSGC
Trigger: GCAGCCTGAATGAAGAGCTCAAGAGAAGAGCCACAC...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642030.1
CDS-3UTR GCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAAAAGAACCACCAAAAGTaGCTCCCAATGGTCCAAGCC +
Preference number: 4 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQKNHQK*LPMVQA
Trigger: GGCTTGGACCATTGGGAGGCACTTTTGGTGGTTCTT...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR GCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAATTAACGGGGAAACCTTaGCAAGGACTCTGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKLTGKP*QGLCGP
Trigger: AGGGCCACAGAGTCCTTGGCAAGGTTTCCCCGTTAA...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR GCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAATGGGCAGCCCCATGTTaGCTGTTCCTTTGCTGTACA +
Preference number: 4 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKWAAPC*LFLCCT
Trigger: TGTACAGCAAAGGAACAGGCAACATGGGGCTGCCCA...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR GCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACGGAGGTTCAGAATCTTaGAGTCTCCAGCTGCGTGAC +
Preference number: 4 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYGGSES*SLQLRD
Trigger: GTCACGCAGCTGGAGACTGCAAGATTCTGAACCTCC...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR GCA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCATTATTCAAGGAAGCATaGTCAGTGCTCATCAGTAAA +
Preference number: 4 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSLFKEA*SVLISK
Trigger: TTTACTGATGAGCACTGAGCATGCTTCCTTGAATAA...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR GCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAATACAACACAGACACATaGACATTGGCCTGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKYNTDT*TLAWGC
Trigger: GCAGCCCCAGGCCAATGTGCATGTGTCTGTGTTGTA...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR GCA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCAGGAATAATGGAGTTTTaGCATGTACATAGATGGGAA +
Preference number: 4 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSGIMEF*HVHRWE
Trigger: TTCCCATCTATGTACATGGCAAAACTCCATTATTCC...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CCA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTAACATTGGTAGTCAGTaGCAGATATCATGGCACTTC +
Preference number: 4 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPNIGSQ*QISWHF
Trigger: GAAGTGCCATGATATCTGCCACTGACTACCAATGTT...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACCATTTGCATAGCATGTaGAGAAGCTGGCTGCCCCAC +
Preference number: 4 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYHLHSM*RSWLPH
Trigger: GTGGGGCAGCCAGCTTCTCCACATGCTATGCAAATG...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAAGGGTCCCAGAGAAAATaGGTTGCCAGTTCCATGGTG +
Preference number: 4 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKGSQRK*VASSMV
Trigger: CACCATGGAACTGGCAACCCATTTTCTCTGGGACCC...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACCTCACAGCCTTCAAGTaGAACCAGCCCTGCCAACAA +
Preference number: 4 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYLTAFK*NQPCQQ
Trigger: TTGTTGGCAGGGCTGGTTCCACTTGAAGGCTGTGAG...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CCA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCAGGCAATTTGGGATGCTaGTCATTCTTTGCATTTAAA +
Preference number: 4 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSGNLGC*SFFAFK
Trigger: TTTAAATGCAAAGAATGACCAGCATCCCAAATTGCC...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CCA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTCAGAAATGGGCAATTTaGGATGCTGGTCATTCTTTG +
Preference number: 4 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPQKWAI*DAGHSL
Trigger: CAAAGAATGACCAGCATCCCAAATTGCCCATTTCTG...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAATCTACATCACTCCCCTaGAAGACGACGGCACTGAAT +
Preference number: 4 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQSTSLP*KTTALN
Trigger: ATTCAGTGCCGTCGTCTTCCAGGGGAGTGATGTAGA...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAATTGGTGGGTAGGAGTTaGGAAGTGGGGAGTGCTGAT +
Preference number: 4 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKLVGRS*EVGSAD
Trigger: ATCAGCACTCCCCACTTCCCAACTCCTACCCACCAA...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAACAGACACATGCACATTaGCCTGGGGCTGCAGATTAT +
Preference number: 4 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQQTHAH*PGAADY
Trigger: ATAATCTGCAGCCCCAGGCCAATGTGCATGTGTCTG...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CCA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTAAGTTTTCAAGATGGTaGCTCCATCTTCCCTTCTCT +
Preference number: 4 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPKFSRW*LHLPFS
Trigger: AGAGAAGGGAAGATGGAGCCACCATCTTGAAAACTT...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641666.1
ENST00000642030.1
CDS-3UTR TCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAATCTTGGGCATGTGTTTaGTTTCCTGTTTCCATGGGG +
Preference number: 4 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQSWACV*FPVSMG
Trigger: CCCCATGGAAACAGGAAATCAAACACATGCCCAAGA...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTAGAAAAATATTCCAGTaGAGGAAATCACACCCAGGA +
Preference number: 4 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPRKIFQ*RKSHPG
Trigger: TCCTGGGTGTGATTTCCTTCACTGGAATATTTTTCT...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAAATTGATGGTGGAGACTaGAGCTCTGCTCAGCAGACT +
Preference number: 4 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKIDGGD*SSAQQT
Trigger: AGTCTGCTGAGCAGAGCTTCAGTCTCCACCATCAAT...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAAGTGTGCCAGAATTGGTaGACGGAAGAGTCCTTATGT +
Preference number: 4 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQVCQNW*TEESLC
Trigger: ACATAAGGACTCTTCCGTTCACCAATTCTGGCACAC...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTTTTAGAAAAGGAGGTTaGAGCAGAGGACTTAATCCA +
Preference number: 4 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPFRKGG*SRGLNP
Trigger: TGGATTAAGTCCTCTGCTTCAACCTCCTTTTCTAAA...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTAAAGTGCTGGGCAATTaGGATCAGTTGTTTGCTTTA +
Preference number: 4 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPKVLGN*DQLFAL
Trigger: TAAAGCAAACAACTGATCTCAATTGCCCAGCACTTT...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAAGCCCGGCCAACTGCGTaGCTTTTAAACCATAGTTTC +
Preference number: 4 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKARPTA*LLNHSF
Trigger: GAAACTATGGTTTAAAAGTCACGCAGTTGGCCGGGC...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTATGCTACAACATGGATaGACCTTGAAAGCATTAAGC +
Preference number: 4 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPMLQHG*TLKALS
Trigger: GCTTAATGCTTTCAAGGTTCATCCATGTTGTAGCAT...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR GCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAAGTGGAAAACGCTTTGTaGTTTCTCCCAGCTGAGGAA +
Preference number: 4 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQVENAL*FLPAEE
Trigger: TTCCTCAGCTGGGAGAAAGCACAAAGCGTTTTCCAC...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR GCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACATGAAGTTAAGCTTCTaGTTGGGGCCTGGAAGGGTG +
Preference number: 4 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYMKLSF*LGPGRV
Trigger: CACCCTTCCAGGCCCCAAGCAGAAGCTTAACTTCAT...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR GCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAAAAGTGGAACCAGCCCTaGCAACAACTTGATTTCAGG +
Preference number: 4 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQKWNQP*QQLDFR
Trigger: CCTGAAATCAAGTTGTTGGCAGGGCTGGTTCCACTT...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR GCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAATTGCACCATTGTAACTaGCCAATGGGTTCACCTTGC +
Preference number: 4 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQLHHCN*PMGSPC
Trigger: GCAAGGTGAACCCATTGGGCAGTTACAATGGTGCAA...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAAGCACCTTACCTGCAATaGGAGTTAGCTGAGCATGCT +
Preference number: 4 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKAPYLQ*ELAEHA
Trigger: AGCATGCTCAGCTAACTCCCATTGCAGGTAAGGTGC...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACGCACCTTACCTGCAATaGGAGTTAGCTGAGCATGCT +
Preference number: 4 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYAPYLQ*ELAEHA
Trigger: AGCATGCTCAGCTAACTCCCATTGCAGGTAAGGTGC...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CCA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTGAATGTCTCATGTTCTaGATTTGCCAGTTTGTTTCC +
Preference number: 4 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPECLMF*ICQFVS
Trigger: GGAAACAAACTGGCAAATCCAGAACATGAGACATTC...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CCA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCAGAATACATTGATGTTTaGATACATTCAAGAACCACC +
Preference number: 4 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSEYIDV*IHSRTT
Trigger: GGTGGTTCTTGAATGTATCCAAACATCAATGTATTC...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAAAATACAAAAATCAGCTaGGCGTGGTGGCACGTGCGT +
Preference number: 4 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKNTKIS*AWWHVR
Trigger: ACGCACGTGCCACCACGCCCAGCTGATTTTTGTATT...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAAGAAGGGAATTGGTTTTaGGAAAGGGCTGTTACCGTC +
Preference number: 4 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQEGNWF*ERAVTV
Trigger: GACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTC...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACCAGACACATGCACATTaGCCTGGGGCTGCAGATTAT +
Preference number: 4 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYQTHAH*PGAADY
Trigger: ATAATCTGCAGCCCCAGGCCAATGTGCATGTGTCTG...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CCA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTTTAACACCAACCAACTaGTACCTGTTTATATCCCTG +
Preference number: 4 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPLTPTN*YLFISL
Trigger: CAGGGATATAAACAGGTACCAGTTGGTTGGTGTTAA...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CCA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTTCTGACTTGAGATGCTaGAATAATGGAGTTTTGCCA +
Preference number: 4 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPSDLRC*NNGVLP
Trigger: TGGCAAAACTCCATTATTCCAGCATCTCAAGTCAGA...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACCAGACACAAACAAGCTaGGAGCTTGCACGGGTGAAT +
Preference number: 4 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYQTQTS*ELARVN
Trigger: ATTCACCCGTGCAAGCTCCCAGCTTGTTTGTGTCTG...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641666.1
ENST00000642030.1
CDS-3UTR CCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAAGTACCCTCTATAGCCTaGCTTCTCAAAGTGTTGTCC +
Preference number: 4 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQVPSIA*LLKVLS
Trigger: GGACAACACTTTGAGAAGCCAGGCTATAGAGGGTAC...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641666.1
ENST00000642030.1
3UTR CAA 72 bp GAACTGAGTGAATATAGAATGTCAGTGGAAGAGGAGTaGTTGACAAAGGAACTCATTCCACCTTCTAAGGAG +
Preference number: 4 (lower is better)
Translates to: ELSEYRMSVEEE*LTKELIPPSKE
Trigger: CTCCTTAGAAGGTGGAATGAGTTCCTTTGTCAACAACTCCTCTTCCACTGACATTCTATATTCACTCAGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAATCTTGGGCATGTGTTTaGTTTCCTGTTTCCATGGGG +
Preference number: 4 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKSWACV*FPVSMG
Trigger: CCCCATGGAAACAGGAAATCAAACACATGCCCAAGA...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAATACTCTGGCTTCTCTTaGTATCCCTCAATGGACTTG +
Preference number: 4 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQYSGFS*YPSMDL
Trigger: CAAGTCCATTGAGGGATATCAAGAGAAGCCAGAGTA...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTAGACATATAGCCCGATaGAATAGAATCAAGAGTACA +
Preference number: 4 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPRHIAR*NRIKST
Trigger: TGTACTCTTGATTCTATTTCATCGGGCTATATGTCT...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACGGAAGACGACGGCACTaGATTAGCTTTAACATGTGC +
Preference number: 4 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYGRRRH*ISFNMC
Trigger: GCACATGTTAAAGCTAATTCAGTGCCGTCGTCTTCC...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTCTTTTGTCTAAGAAATaGCTAGTGGTTTCATGGAAG +
Preference number: 4 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPLLSKK*LVVSWK
Trigger: CTTCCATGAAACCACTAGTCATTTCTTAGACAAAAG...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR GCA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTCTGACTGAGACAGCCTaGATATGTTATGAATTTGTT +
Preference number: 4 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPLTETA*ICYEFV
Trigger: AACAAATTCATAACATATGCAGGCTGTCTCAGTCAG...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR GCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAAACCCAGGACGCCAGTTaGAAAGTATATCACCACGTT +
Preference number: 4 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKTQDAS*KVYHHV
Trigger: AACGTGGTGATATACTTTGCAACTGGCGTCCTGGGT...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR GCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACACCCAGGACGCCAGTTaGAAAGTATATCACCACGTT +
Preference number: 4 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYTQDAS*KVYHHV
Trigger: AACGTGGTGATATACTTTGCAACTGGCGTCCTGGGT...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR GCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAACGGCCTCGCTATGTCTaGCATTTTCAATATTCAGAG +
Preference number: 4 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQRPRYV*HFQYSE
Trigger: CTCTGAATATTGAAAATGGCAGACATAGCGAGGCCG...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR GCA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTCCCTGTTCTCCAATATaGAACATTTTTAGTGGTCAT +
Preference number: 4 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPPCSPI*NIFSGH
Trigger: ATGACCACTAAAAATGTTGCATATTGGAGAACAGGG...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR GCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAACCAGAGAAAATGGGTTaGCAGTTCCATGGTGAAATG +
Preference number: 4 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQPEKMG*QFHGEM
Trigger: CATTTCACCATGGAACTGGCAACCCATTTTCTCTGG...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR GCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACGCCTGGAGTGTTGGGTaGATTCTTGTGTCTCACAAT +
Preference number: 4 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYAWSVG*ILVSHN
Trigger: ATTGTGAGACACAAGAATGCACCCAACACTCCAGGC...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR GCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAAGTGCTCATCAGTAAATaGCTGGAGTGTTGGGTGCAT +
Preference number: 4 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKVLISK*LECWVH
Trigger: ATGCACCCAACACTCCAGGCATTTACTGATGAGCAC...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAAGAAGGGAATTGGTTTTaGGAAAGGGCTGTTACCGTC +
Preference number: 4 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKEGNWF*ERAVTV
Trigger: GACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTC...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAACAGCAGGAAGGGAATTaGTTTTGGGAAAGGGCTGTT +
Preference number: 4 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKQQEGN*FWERAV
Trigger: AACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTG...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACACATGCACATTGGCCTaGGGCTGCAGATTATTCAAG +
Preference number: 4 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYTCTLA*GCRLFK
Trigger: CTTGAATAATCTGCAGCCCCAGGCCAATGTGCATGT...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACGAGGAGGAGCCAATCTaGGTTTCAGCTTTAACACCA +
Preference number: 4 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYEEEPI*VSALTP
Trigger: TGGTGTTAAAGCTGAAACCCAGATTGGCTCCTCCTC...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CCA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTCCTTGGTTTAGGCAGTaGATTTTTAGATATGGTATC +
Preference number: 4 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPPWFRQ*IFRYGI
Trigger: GATACCATATCTAAAAATCCACTGCCTAAACCAAGG...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAAGTACCCTCTATAGCCTaGCTTCTCAAAGTGTTGTCC +
Preference number: 4 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKVPSIA*LLKVLS
Trigger: GGACAACACTTTGAGAAGCCAGGCTATAGAGGGTAC...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641666.1
ENST00000642030.1
CDS-3UTR CCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAAGCTACCATCGGGATCTaGAAATGTAGTGTTAGTTCC +
Preference number: 4 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQATIGI*KCSVSS
Trigger: GGAACTAACACTACATTTCCAGATCCCGATGGTAGC...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641666.1
ENST00000642030.1
CDS-3UTR TCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAACCAAAGAGAATGAACTaGATCTCTGACGTTGCTGAA +
Preference number: 4 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQPKRMN*ISDVAE
Trigger: TTCAGCAACGTCAGAGATTCAGTTCATTCTCTTTGG...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACTCAAGCATCTGTCTCTaGGCTAGACTTAGGACTTCA +
Preference number: 4 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYSSICL*ARLRTS
Trigger: TGAAGTCCTAAGTCTAGCTCAGAGACAGATGCTTGA...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAATACTCTGGCTTCTCTTaGTATCCCTCAATGGACTTG +
Preference number: 4 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKYSGFS*YPSMDL
Trigger: CAAGTCCATTGAGGGATATCAAGAGAAGCCAGAGTA...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAATTTAGAAAAGGAGAGTaGAGAACATGGGGCATGCAG +
Preference number: 4 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKFRKGE*RTWGMQ
Trigger: CTGCATGCCCCATGTTCTTCACTCTCCTTTTCTAAA...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACAAACAAGCAGCAGGGTaGATTTGGTCTGCATGTTGT +
Preference number: 4 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYKQAAG*IWSACC
Trigger: ACAACATGCAGACCAAATTCACCCTGCTGCTTGTTT...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACTGCTGTACACATGGTTaGCAAAGAAAAGGAAGAGGG +
Preference number: 4 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYCCTHG*QRKGRG
Trigger: CCCTCTTCCTTTTCTTTGTCAACCATGTGTACAGCA...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAATTGCCAGTTCCATGGTaGAATGCACAGGGTTTTATA +
Preference number: 4 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQLPVPW*NAQGFI
Trigger: TATAAAACCCTGTGCATTTCACCATGGAACTGGCAA...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACTGGAAGAGGAGTTGTTaGCAAAGGAACTCATTCCAC +
Preference number: 4 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYWKRSC*QRNSFH
Trigger: GTGGAATGAGTTCCTTTGTCAACAACTCCTCTTCCA...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAACAAGGGATTCTGACTTaGGATGCTGGAATAATGGAG +
Preference number: 4 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKQGILT*DAGIME
Trigger: CTCCATTATTCCAGCATCTCAAGTCAGAATCCCTTG...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR GCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAAACTAAACCAGGAAAGTaGTGGGCAATTGAGATCAGT +
Preference number: 4 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQTKPGK*WAIEIS
Trigger: ACTGATCTCAATTGCCCAGCACTTTCCTGGTTTAGT...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR GCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAATGCAAGCTTCCAGCTTaGTTATCTATGTCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKCKLPA*LSMSAA
Trigger: AGCTGCAGACATAGATAAGCAAGCTGGAAGCTTGCA...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR GCA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTATTAGCTTTAACATGTaGGTGATGGTGAATAATGAC +
Preference number: 4 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPISFNM*VMVNND
Trigger: GTCATTATTCACCATCACGCACATGTTAAAGCTAAT...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR GCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAATTCCATCCTTTTCTTTaGTACCATCGGGATCTGGAA +
Preference number: 4 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQFHPFL*YHRDLE
Trigger: TTCCAGATCCCGATGGTAGCAAAGAAAAGGATGGAA...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641666.1
ENST00000642030.1
CDS-3UTR CCA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTACCCTAAAATTTATGTaGAATGGTAGAGGATTCACA +
Preference number: 4 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPTLKFM*NGRGFT
Trigger: TGTGAATCCTCTACCATTCCACATAAATTTTAGGGT...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAACAGAAATGGGCAATTTaGGATGCTGGTCATTCTTTG +
Preference number: 4 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQQKWAI*DAGHSL
Trigger: CAAAGAATGACCAGCATCCCAAATTGCCCATTTCTG...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACAAATCTAACTTAGGCTaGGTGCTGTGGCTCATGCTT +
Preference number: 4 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYKSNLG*VLWLML
Trigger: AAGCATGAGCCACAGCACCCAGCCTAAGTTAGATTT...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAAAAATGCCTGGAGTGTTaGGTGCATTCTTGTGTCTCA +
Preference number: 4 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKKCLEC*VHSCVS
Trigger: TGAGACACAAGAATGCACCCAACACTCCAGGCATTT...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
40% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CCA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTTTAATATGTGTCTTGTaGCTTACAACACAGACACAT +
Preference number: 4 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPLICVL*LTTQTH
Trigger: ATGTGTCTGTGTTGTAAGCCACAAGACACATATTAA...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACTGGGAAGATTGTGAGTaGAGAAGGCTGGGAGTAATT +
Preference number: 4 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYWEDCE*RRLGVI
Trigger: AATTACTCCCAGCCTTCTCCACTCACAATCTTCCCA...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAAAAGTTTTCAAGATGGTaGCTCCATCTTCCCTTCTCT +
Preference number: 4 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQKFSRW*LHLPFS
Trigger: AGAGAAGGGAAGATGGAGCCACCATCTTGAAAACTT...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641666.1
ENST00000642030.1
CDS-3UTR CCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACCAGATAGTAAGGTTATaGGAGTCCTCAGTGAGGCTT +
Preference number: 4 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYQIVRL*ESSVRL
Trigger: AAGCCTCACTGAGGACTCCCATAACCTTACTATCTG...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641666.1
ENST00000642030.1
CDS-3UTR CCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAAGCTACCATCGGGATCTaGAAATGTAGTGTTAGTTCC +
Preference number: 4 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKATIGI*KCSVSS
Trigger: GGAACTAACACTACATTTCCAGATCCCGATGGTAGC...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641666.1
ENST00000642030.1
3UTR CAA 72 bp CACTTTCACCGTCATAATGTTCTCAGCGATGATTTTTaGCAAAGGCAGTTTCAGCATCACTCTCCTCAATTA +
Preference number: 4 (lower is better)
Translates to: HFHRHNVLSDDF*QRQFQHHSPQL
Trigger: TAATTGAGGAGAGTGATGCTGAAACTGCCTTTGCAAAAAATCATCGCTGAGAACATTATGACGGTGAAAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR CAA 72 bp TTGATGAGAATATGGGGAAATTGGAACACTCCTACATaGTTGGTGGAGATGAAAATGGTGCAGTCACTAAGA +
Preference number: 4 (lower is better)
Translates to: LMRIWGNWNTPT*LVEMKMVQSLR
Trigger: TCTTAGTGACTGCACCATTTTCATCTCCACCAACAATGTAGGAGTGTTCCAATTTCCCCATATTCTCATCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAATTTTCAACAAGGATGTaGAGACAATTCACTGGGGAG +
Preference number: 4 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKFSTRM*RQFTGE
Trigger: CTCCCCAGTGAATTGTCTTCACATCCTTGTTGAAAA...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAAATACTCCTGGCTCAGTaGATGACAGTTCAATATTGT +
Preference number: 4 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQILLAQ*MTVQYC
Trigger: ACAATATTGAACTGTCATTCACTGAGCCAGGAGTAT...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACAATCCAAAGTATGTGTaGAATTGGGCCATAGCACCT +
Preference number: 4 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYNPKYV*NWAIAP
Trigger: AGGTGCTATGGCCCAATTTCACACATACTTTGGATT...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAAGTTGTTTGCTTTACATaGAGGTCCTGGACTGAACAA +
Preference number: 4 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKVVCFT*RSWTEQ
Trigger: TTGTTCAGTCCAGGACCTTCATGTAAAGCAAACAAC...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAAGAATTGAATCTTTATTaGTCTGTGTGCTGCACTTGG +
Preference number: 4 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQELNLY*SVCCTW
Trigger: CCAAGTGCAGCACACAGATCAATAAAGATTCAATTC...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAAACAACAACTCAACTCTaGCATTGTAGGTTGAAAGCA +
Preference number: 4 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQTTTQL*HCRLKA
Trigger: TGCTTTCAACCTACAATGTCAGAGTTGAGTTGTTGT...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAATTGTCAAAATCAAGATaGAGCAGCATAGTTGTCTGG +
Preference number: 4 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQLSKSR*SSIVVW
Trigger: CCAGACAACTATGCTGCTTCATCTTGATTTTGACAA...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAAAGCAAACCTTCACAGTaGAAAAGGCCAGAGAGTAAA +
Preference number: 4 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKSKPSQ*KRPESK
Trigger: TTTACTCTCTGGCCTTTTTCACTGTGAAGGTTTGCT...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR GCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAAACTAAACCAGGAAAGTaGTGGGCAATTGAGATCAGT +
Preference number: 4 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKTKPGK*WAIEIS
Trigger: ACTGATCTCAATTGCCCAGCACTTTCCTGGTTTAGT...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR GCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAAATGGGCAATTTGGGATaGTGGTCATTCTTTGCATTT +
Preference number: 4 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQMGNLG*WSFFAF
Trigger: AAATGCAAAGAATGACCAGCATCCCAAATTGCCCAT...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR GCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAAAAGAGTTTCTTTAAATaGAGAATCCCTGGTCAGACG +
Preference number: 4 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQKSFFK*RIPGQT
Trigger: CGTCTGACCAGGGATTCTGCATTTAAAGAAACTCTT...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641666.1
ENST00000642030.1
CDS-3UTR GCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAATTCCATCCTTTTCTTTaGTACCATCGGGATCTGGAA +
Preference number: 4 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKFHPFL*YHRDLE
Trigger: TTCCAGATCCCGATGGTAGCAAAGAAAAGGATGGAA...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000641666.1
ENST00000642030.1
CDS-3UTR CCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAAAAACCAGGAAAGTGCTaGGCAATTGAGATCAGTTGT +
Preference number: 4 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKKPGKC*AIEISC
Trigger: ACAACTGATCTCAATTGCCCAGCACTTTCCTGGTTT...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
39% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACTATGAATTTGGTCAGTaGGAGCCCAGAGGGAATATT +
Preference number: 4 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYYEFGQ*EPRGNI
Trigger: AATATTCCCTCTGGGCTCCCACTGACCAAATTCATA...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAAGAATGTCTCATGTTCTaGATTTGCCAGTTTGTTTCC +
Preference number: 4 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQECLMF*ICQFVS
Trigger: GGAAACAAACTGGCAAATCCAGAACATGAGACATTC...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAACCTTTGCTGTACACATaGTTGACAAAGAAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQPLLYT*LTKKRK
Trigger: CTTCCTTTTCTTTGTCAACCATGTGTACAGCAAAGG...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACATCAAGGGTTTACTCTaGCTTCTCTTGATATCCCTC +
Preference number: 4 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYIKGLL*LLLISL
Trigger: GAGGGATATCAAGAGAAGCCAGAGTAAACCCTTGAT...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641666.1
ENST00000642030.1
3UTR CAA 72 bp ATGAGAATATGGGGAAATTGGAACACTCCTACATTGTaGGTGGAGATGAAAATGGTGCAGTCACTAAGAAAA +
Preference number: 4 (lower is better)
Translates to: MRIWGNWNTPTL*VEMKMVQSLRK
Trigger: TTTTCTTAGTGACTGCACCATTTTCATCTCCACCAACAATGTAGGAGTGTTCCAATTTCCCCATATTCTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAAAGAAAAATATTCCAGTaGAGGAAATCACACCCAGGA +
Preference number: 4 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKRKIFQ*RKSHPG
Trigger: TCCTGGGTGTGATTTCCTTCACTGGAATATTTTTCT...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACAGAAAAATATTCCAGTaGAGGAAATCACACCCAGGA +
Preference number: 4 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYRKIFQ*RKSHPG
Trigger: TCCTGGGTGTGATTTCCTTCACTGGAATATTTTTCT...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAAAAAGAAGAACCAACTTaGAGACTCACATTTCCTGAT +
Preference number: 4 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQKEEPT*RLTFPD
Trigger: ATCAGGAAATGTGAGTCTTCAAGTTGGTTCTTCTTT...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACATGAAGGTCCTGGACTaGACAATAATTTCCTCTCTT +
Preference number: 4 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYMKVLD*TIISSL
Trigger: AAGAGAGGAAATTATTGTTCAGTCCAGGACCTTCAT...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAATGGTTTTCCTGTAACTaGGATGTTTTTCTGGGATTG +
Preference number: 4 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKWFSCN*DVFLGL
Trigger: CAATCCCAGAAAAACATCTCAGTTACAGGAAAACCA...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAAGAATTGAATCTTTATTaGTCTGTGTGCTGCACTTGG +
Preference number: 4 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKELNLY*SVCCTW
Trigger: CCAAGTGCAGCACACAGATCAATAAAGATTCAATTC...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACGAATTGAATCTTTATTaGTCTGTGTGCTGCACTTGG +
Preference number: 4 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYELNLY*SVCCTW
Trigger: CCAAGTGCAGCACACAGATCAATAAAGATTCAATTC...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAAACAACAACTCAACTCTaGCATTGTAGGTTGAAAGCA +
Preference number: 4 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKTTTQL*HCRLKA
Trigger: TGCTTTCAACCTACAATGTCAGAGTTGAGTTGTTGT...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACTTGTCAAAATCAAGATaGAGCAGCATAGTTGTCTGG +
Preference number: 4 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYLSKSR*SSIVVW
Trigger: CCAGACAACTATGCTGCTTCATCTTGATTTTGACAA...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACTCTGCTCTTGTAACATaGAAGCAGCCACAGATAATA +
Preference number: 4 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYSALVT*KQPQII
Trigger: TATTATCTGTGGCTGCTTTCATGTTACAAGAGCAGA...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAATTCATGGAAGAGTGTTaGAAATTGATCGATTCCTTC +
Preference number: 4 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQFMEEC*KLIDSF
Trigger: GAAGGAATCGATCAATTTTCAACACTCTTCCATGAA...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACTGGAGTCATCTTGTCTaGAGATACGCATTTTGGATT +
Preference number: 4 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYWSHLV*RYAFWI
Trigger: AATCCAAAATGCGTATCTTCAGACAAGATGACTCCA...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACATGCTACAACATGGATaGACCTTGAAAGCATTAAGC +
Preference number: 4 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYMLQHG*TLKALS
Trigger: GCTTAATGCTTTCAAGGTTCATCCATGTTGTAGCAT...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACGTGAAGACAATTCACTaGGGAGAAAGAATGGTCTAT +
Preference number: 4 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYVKTIH*GERMVY
Trigger: ATAGACCATTCTTTCTCCCCAGTGAATTGTCTTCAC...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACCCTTTGCTGTACACATaGTTGACAAAGAAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYPLLYT*LTKKRK
Trigger: CTTCCTTTTCTTTGTCAACCATGTGTACAGCAAAGG...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAACTTTTATTATACAGATaGGTTCTTTACCTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKLLLYR*VLYLGS
Trigger: GCTGCCCAGGTAAAGAACCCATCTGTATAATAAAAG...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACGATGAAAGCAGAGATTaGGGTGATGCTTCTATATTG +
Preference number: 4 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYDESRD*GDASIL
Trigger: CAATATAGAAGCATCACCCCAATCTCTGCTTTCATC...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAAAAAGAAGAACCAACTTaGAGACTCACATTTCCTGAT +
Preference number: 4 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKKEEPT*RLTFPD
Trigger: ATCAGGAAATGTGAGTCTTCAAGTTGGTTCTTCTTT...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
37% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACAAATTCTACAGCAAATaGGTGTCAAACATTTCCTGG +
Preference number: 4 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYKFYSK*VSNISW
Trigger: CCAGGAAATGTTTGACACTCATTTGCTGTAGAATTT...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAAAAATTCTACAGCAAATaGGTGTCAAACATTTCCTGG +
Preference number: 4 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKKFYSK*VSNISW
Trigger: CCAGGAAATGTTTGACACTCATTTGCTGTAGAATTT...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
37% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAATCTGACATTGTAGGTTaGAAGCAGCTGTCAATAATA +
Preference number: 4 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKSDIVG*KQLSII
Trigger: TATTATTGACAGCTGCTTTCAACCTACAATGTCAGA...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACTCTGACATTGTAGGTTaGAAGCAGCTGTCAATAATA +
Preference number: 4 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYSDIVG*KQLSII
Trigger: TATTATTGACAGCTGCTTTCAACCTACAATGTCAGA...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAAGGTCAATTTTCTTGTTaGATGTCTCATGTTCTGGAT +
Preference number: 4 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKGQFSC*MSHVLD
Trigger: ATCCAGAACATGAGACATTCAACAAGAAAATTGACC...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR TCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACACCGTTTCCACTAATTaGGTGAGTTACATGAAAAGT +
Preference number: 4 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYTVSTN*VSYMKS
Trigger: ACTTTTCATGTAACTCACTCAATTAGTGGAAACGGT...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR GCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAACTGACTGAGACAGCCTaGATATGTTATGAATTTGTT +
Preference number: 4 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKLTETA*ICYEFV
Trigger: AACAAATTCATAACATATGCAGGCTGTCTCAGTCAG...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR GCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACCTGACTGAGACAGCCTaGATATGTTATGAATTTGTT +
Preference number: 4 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYLTETA*ICYEFV
Trigger: AACAAATTCATAACATATGCAGGCTGTCTCAGTCAG...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR GCA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAAATTAGCTTTAACATGTaGGTGATGGTGAATAATGAC +
Preference number: 4 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQISFNM*VMVNND
Trigger: GTCATTATTCACCATCACGCACATGTTAAAGCTAAT...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR GCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAATTATTCAAGGAAGCATaGTCAGTGCTCATCAGTAAA +
Preference number: 4 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKLFKEA*SVLISK
Trigger: TTTACTGATGAGCACTGAGCATGCTTCCTTGAATAA...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CCA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAACCTTGGTTTAGGCAGTaGATTTTTAGATATGGTATC +
Preference number: 4 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKPWFRQ*IFRYGI
Trigger: GATACCATATCTAAAAATCCACTGCCTAAACCAAGG...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACCCTTGGTTTAGGCAGTaGATTTTTAGATATGGTATC +
Preference number: 4 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYPWFRQ*IFRYGI
Trigger: GATACCATATCTAAAAATCCACTGCCTAAACCAAGG...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR GCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACTATTTTAGGTGGAACTaGTCTGGATTTAGGTATCAT +
Preference number: 4 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYYFRWN*SGFRYH
Trigger: ATGATACCTAAATCCAGAGCAGTTCCACCTAAAATA...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CCA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACACCCTAAAATTTATGTaGAATGGTAGAGGATTCACA +
Preference number: 4 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYTLKFM*NGRGFT
Trigger: TGTGAATCCTCTACCATTCCACATAAATTTTAGGGT...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR CAA 72 bp AAACAGAAATGGGCAATTTGGGATGCTGGTCATTCTTaGCATTTAAAGCTAGTCTTGATGAAACTGTCTTTT +
Preference number: 4 (lower is better)
Translates to: KQKWAIWDAGHS*HLKLVLMKLSF
Trigger: AAAAGACAGTTTCATCAAGACTAGCTTTAAATGCAAAGAATGACCAGCATCCCAAATTGCCCATTTCTGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR CAA 72 bp TCTGTAAGCTCTGTAAAGGCAGGAATTGAATCTTTATaGATCTGTGTGCTGCACTTGGTGAGTAATAAAAAT +
Preference number: 4 (lower is better)
Translates to: SVSSVKAGIESL*ICVLHLVSNKN
Trigger: ATTTTTATTACTCACCAAGTGCAGCACACAGATCAATAAAGATTCAATTCCTGCCTTTACAGAGCTTACAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
3UTR CAA 72 bp GGAGATGAAAATGGTGCAGTCACTAAGAAAAATATTTaGGCAGTTCCTCAATATGTTAAACATAGCATTACC +
Preference number: 4 (lower is better)
Translates to: GDENGAVTKKNI*AVPQYVKHSIT
Trigger: GGTAATGCTATGTTTAACATATTGAGGAACTGCCAAAATATTTTTCTTAGTGACTGCACCATTTTCATCTCC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS GCA 90 bp CTCAATGGACTTGGCTCTGTTGACCTTCCCTCCTTGCACAATCGGTaGAGGCAGGGCAAGGGGGTGGGTGTCAGGGGCTGGTTCTCTGGA +
Preference number: 5 (lower is better)
Translates to: LNGLGSVDLPSLHNR*RQGKGVGVRGWFSG
Trigger: TCCAGAGAACCAGCCCCTGACACCCACCCCCTTGCCCTGCCTGCACCGATTGTGCAAGGAGGGAAGGTCAACAGAGCCAAGTCCATTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000601611.6
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
ENST00000672931.1
CDS TCA 90 bp TTTACTCTGGCTTCTCTTGATATCCCTCAATGGACTTGGCTCTGTTaGCCTTCCCTCCTTGCACAATCGGTGCAGGCAGGGCAAGGGGGT +
Preference number: 5 (lower is better)
Translates to: FTLASLDIPQWTWLC*PSLLAQSVQAGQGG
Trigger: ACCCCCTTGCCCTGCCTGCACCGATTGTGCAAGGAGGGAAGGTCAACAGAGCCAAGTCCATTGAGGGATATCAAGAGAAGCCAGAGTAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000601611.6
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCACTGGGCAGCCCCATGTaGCCTGTTCCTTTGCTGTAC +
Preference number: 5 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSLGSPM*PVPLLY
Trigger: GTACAGCAAAGGAACAGGCAACATGGGGCTGCCCAG...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTGCCAAGAAGGCGCCATaGCACTCCAGCCTGGGCAAC +
Preference number: 5 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPAKKAP*HSSLGN
Trigger: GTTGCCCAGGCTGGAGTGCAATGGCGCCTTCTTGGC...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS TCA 90 bp GAGCAGACAAGATGGCGCAGATCAAGGGTTTACTCTGGCTTCTCTTaGTATCCCTCAATGGACTTGGCTCTGTTGACCTTCCCTCCTTGC +
Preference number: 5 (lower is better)
Translates to: EQTRWRRSRVYSGFS*YPSMDLALLTFPPC
Trigger: GCAAGGAGGGAAGGTCAACAGAGCCAAGTCCATTGAGGGATATCAAGAGAAGCCAGAGTAAACCCTTGATCTGCGCCATCTTGTCTGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641666.1
ENST00000642030.1
CDS CCA 90 bp TGTCAGCCACGAGCAGACAAGATGGCGCAGATCAAGGGTTTACTCTaGCTTCTCTTGATATCCCTCAATGGACTTGGCTCTGTTGACCTT +
Preference number: 5 (lower is better)
Translates to: CQPRADKMAQIKGLL*LLLISLNGLGSVDL
Trigger: AAGGTCAACAGAGCCAAGTCCATTGAGGGATATCAAGAGAAGCCAGAGTAAACCCTTGATCTGCGCCATCTTGTCTGCTCGTGGCTGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641666.1
ENST00000642030.1
CDS-3UTR CAA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCACAGGTGGAAAACGCTTaGTGCTTTCTCCCAGCTGAG +
Preference number: 5 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSQVENA*CFLPAE
Trigger: CTCAGCTGGGAGAAAGCACAAAGCGTTTTCCACCTG...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTGTTGACCTTCCCTCCTaGCACAATCGGTGCAGGCAG +
Preference number: 5 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPVDLPS*HNRCRQ
Trigger: CTGCCTGCACCGATTGTGCAAGGAGGGAAGGTCAAC...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCACCAATCGGTATGAATTaGGTCAGTGGGAGCCCAGAG +
Preference number: 5 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSPIGMN*VSGSPE
Trigger: CTCTGGGCTCCCACTGACCAAATTCATACCGATTGG...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTGCATTTCCCAGGAACTaGCCAGGAGGGGATCTCTCC +
Preference number: 5 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPAFPRN*PGGDLS
Trigger: GGAGAGATCCCCTCCTGGCAAGTTCCTGGGAAATGC...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642030.1
CDS-3UTR CAA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCAGGAAGTGTGCCAGAATaGGTGAACGGAAGAGTCCTT +
Preference number: 5 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSGSVPE*VNGRVL
Trigger: AAGGACTCTTCCGTTCACCAATTCTGGCACACTTCC...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCACACGAGGTCAGGAGATaGAGACCATCATGGCTAACA +
Preference number: 5 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSHEVRR*RPSWLT
Trigger: TGTTAGCCATGATGGTCTCAATCTCCTGACCTCGTG...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCAATGAGCAAGGACAGCTaGGAGGTTAGAGGCAAGATG +
Preference number: 5 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSMSKDS*EVRGKM
Trigger: CATCTTGCCTCTAACCTCCAAGCTGTCCTTGCTCAT...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCAGTCCCCAGAAGCAATTaGGGGAGGTTCAGAATCTTG +
Preference number: 5 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSVPRSN*GRFRIL
Trigger: CAAGATTCTGAACCTCCCCAAATTGCTTCTGGGGAC...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCAAGTCAGGAGAATTGCTaGAACCTGAGAGGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSSQENC*NLRGGG
Trigger: ACCTCCACCTCTCAGGTTCAAGCAATTCTCCTGACT...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTCACCCAGGACGCCAGTaGCAAAGTATATCACCACGT +
Preference number: 5 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPHPGRQ*QSISPR
Trigger: ACGTGGTGATATACTTTGCAACTGGCGTCCTGGGTG...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTATGGACTTGGCTCTGTaGACCTTCCCTCCTTGCACA +
Preference number: 5 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPMDLAL*TFPPCT
Trigger: TGTGCAAGGAGGGAAGGTCAACAGAGCCAAGTCCAT...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTAAGTTAAGCTTCTGCTaGGGGCCTGGAAGGGTGATG +
Preference number: 5 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPKLSFC*GPGRVM
Trigger: CATCACCCTTCCAGGCCCCAAGCAGAAGCTTAACTT...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTCCAGCAGGAAGGGAATaGGTTTTGGGAAAGGGCTGT +
Preference number: 5 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPPAGRE*VLGKGC
Trigger: ACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGG...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAAGCCAAGAAGGCGCCATaGCACTCCAGCCTGGGCAAC +
Preference number: 5 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKAKKAP*HSSLGN
Trigger: GTTGCCCAGGCTGGAGTGCAATGGCGCCTTCTTGGC...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCACTTCCATCCTTTTCTTaGCTACCATCGGGATCTGGA +
Preference number: 5 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSLPSFS*LPSGSG
Trigger: TCCAGATCCCGATGGTAGCAAAGAAAAGGATGGAAG...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641666.1
ENST00000642030.1
CDS-3UTR CAA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCATTCTTGGGCATGTGTTaGATTTCCTGTTTCCATGGG +
Preference number: 5 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSFLGMC*ISCFHG
Trigger: CCCATGGAAACAGGAAATCAAACACATGCCCAAGAA...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCACAGGAGGAGAAATTCTaGGGCATGTGTTTGATTTCC +
Preference number: 5 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSQEEKF*GMCLIS
Trigger: GGAAATCAAACACATGCCCAAGAATTTCTCCTCCTG...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAAGTTGACCTTCCCTCCTaGCACAATCGGTGCAGGCAG +
Preference number: 5 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQVDLPS*HNRCRQ
Trigger: CTGCCTGCACCGATTGTGCAAGGAGGGAAGGTCAAC...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTTATCCCTCAATGGACTaGGCTCTGTTGACCTTCCCT +
Preference number: 5 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPYPSMD*ALLTFP
Trigger: AGGGAAGGTCAACAGAGCCAAGTCCATTGAGGGATA...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTGGAAGTGTGCCAGAATaGGTGAACGGAAGAGTCCTT +
Preference number: 5 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPGSVPE*VNGRVL
Trigger: AAGGACTCTTCCGTTCACCAATTCTGGCACACTTCC...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTATGAGCAAGGACAGCTaGGAGGTTAGAGGCAAGATG +
Preference number: 5 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPMSKDS*EVRGKM
Trigger: CATCTTGCCTCTAACCTCCAAGCTGTCCTTGCTCAT...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTGTCCCCAGAAGCAATTaGGGGAGGTTCAGAATCTTG +
Preference number: 5 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPVPRSN*GRFRIL
Trigger: CAAGATTCTGAACCTCCCCAAATTGCTTCTGGGGAC...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTCCAATGGTCCAAGCCTaGCTACTTATGAAAGTCCTG +
Preference number: 5 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPPMVQA*LLMKVL
Trigger: CAGGACTTTCATAAGTAGCAAGGCTTGGACCATTGG...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACGTTGACCTTCCCTCCTaGCACAATCGGTGCAGGCAG +
Preference number: 5 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYVDLPS*HNRCRQ
Trigger: CTGCCTGCACCGATTGTGCAAGGAGGGAAGGTCAAC...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCAAAAGTATGTGTGAAATaGGGCCATAGCACCTTACCT +
Preference number: 5 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSKVCVK*GHSTLP
Trigger: AGGTAAGGTGCTATGGCCCAATTTCACACATACTTT...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCAGAAAGTGCTGGGCAATaGAGATCAGTTGTTTGCTTT +
Preference number: 5 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSESAGQ*RSVVCF
Trigger: AAAGCAAACAACTGATCTCAATTGCCCAGCACTTTC...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCATCTGGATTTGCCAGTTaGTTTCCTCATCATGTCACT +
Preference number: 5 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSSGFAS*FPHHVT
Trigger: AGTGACATGATGAGGAAACAAACTGGCAAATCCAGA...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAAGAGGGAGCCTCCATGTaGAACATGACTGGTCCCCAG +
Preference number: 5 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKEGASM*NMTGPQ
Trigger: CTGGGGACCAGTCATGTTCAACATGGAGGCTCCCTC...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACGAGGGAGCCTCCATGTaGAACATGACTGGTCCCCAG +
Preference number: 5 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYEGASM*NMTGPQ
Trigger: CTGGGGACCAGTCATGTTCAACATGGAGGCTCCCTC...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAACTGGGCAGCCCCATGTaGCCTGTTCCTTTGCTGTAC +
Preference number: 5 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKLGSPM*PVPLLY
Trigger: GTACAGCAAAGGAACAGGCAACATGGGGCTGCCCAG...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCAGGTGATGCTTCTATATaGTCAAGGAAAGCCAAAGAC +
Preference number: 5 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSGDASI*SRKAKD
Trigger: GTCTTTGGCTTTCCTTGACAATATAGAAGCATCACC...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCATGTCTACACAAAAATTaGTACACAAGGCTGGGCATG +
Preference number: 5 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSCLHKN*YTRLGM
Trigger: CATGCCCAGCCTTGTGTACAAATTTTTGTGTAGACA...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTTTCTTGGGCATGTGTTaGATTTCCTGTTTCCATGGG +
Preference number: 5 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPFLGMC*ISCFHG
Trigger: CCCATGGAAACAGGAAATCAAACACATGCCCAAGAA...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTCAGGAGGAGAAATTCTaGGGCATGTGTTTGATTTCC +
Preference number: 5 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPQEEKF*GMCLIS
Trigger: GGAAATCAAACACATGCCCAAGAATTTCTCCTCCTG...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAAATGGACTTGGCTCTGTaGACCTTCCCTCCTTGCACA +
Preference number: 5 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQMDLAL*TFPPCT
Trigger: TGTGCAAGGAGGGAAGGTCAACAGAGCCAAGTCCAT...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCAATTGAGATCAGTTGTTaGCTTTACATGAAGGTCCTG +
Preference number: 5 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSIEISC*LYMKVL
Trigger: CAGGACCTTCATGTAAAGCAAACAACTGATCTCAAT...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCAGGAATTGAATCTTTATaGATCTGTGTGCTGCACTTG +
Preference number: 5 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSGIESL*ICVLHL
Trigger: CAAGTGCAGCACACAGATCAATAAAGATTCAATTCC...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAACCAATCGGTATGAATTaGGTCAGTGGGAGCCCAGAG +
Preference number: 5 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQPIGMN*VSGSPE
Trigger: CTCTGGGCTCCCACTGACCAAATTCATACCGATTGG...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTTCTATGTCAGAGATTTaGCTACACAGAGGGGGTATG +
Preference number: 5 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPSMSEI*LHRGGM
Trigger: CATACCCCCTCTGTGTAGCAAAATCTCTGACATAGA...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAACCAGCAGGAAGGGAATaGGTTTTGGGAAAGGGCTGT +
Preference number: 5 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQPAGRE*VLGKGC
Trigger: ACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGG...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCAGAGAATATGGGGAAATaGGAACACTCCTACATTGTT +
Preference number: 5 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSENMGK*EHSYIV
Trigger: AACAATGTAGGAGTGTTCCAATTTCCCCATATTCTC...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS TCA 90 bp ATGATATTCCATTCAACCCAGGGGTGCCTGAGGGACAACAGCAGATaGAATATTTATAGCTTCCCACATCTGCTCAATAGGCACATTTCT +
Preference number: 5 (lower is better)
Translates to: MIFHSTQGCLRDNSR*NIYSFPHLLNRHIS
Trigger: AGAAATGTGCCTATTGAGCAGATGTGGGAAGCTATAAATATTTCATCTGCTGTTGTCCCTCAGGCACCCCTGGGTTGAATGGAATATCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601611.6
CDS-3UTR CAA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAACACCCAGGACGCCAGTaGCAAAGTATATCACCACGT +
Preference number: 5 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKHPGRQ*QSISPR
Trigger: ACGTGGTGATATACTTTGCAACTGGCGTCCTGGGTG...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACCAGGTGGAAAACGCTTaGTGCTTTCTCCCAGCTGAG +
Preference number: 5 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYQVENA*CFLPAE
Trigger: CTCAGCTGGGAGAAAGCACAAAGCGTTTTCCACCTG...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACATGGACTTGGCTCTGTaGACCTTCCCTCCTTGCACA +
Preference number: 5 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYMDLAL*TFPPCT
Trigger: TGTGCAAGGAGGGAAGGTCAACAGAGCCAAGTCCAT...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACAAGTTAAGCTTCTGCTaGGGGCCTGGAAGGGTGATG +
Preference number: 5 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYKLSFC*GPGRVM
Trigger: CATCACCCTTCCAGGCCCCAAGCAGAAGCTTAACTT...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTAAAGTATGTGTGAAATaGGGCCATAGCACCTTACCT +
Preference number: 5 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPKVCVK*GHSTLP
Trigger: AGGTAAGGTGCTATGGCCCAATTTCACACATACTTT...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTGAAAGTGCTGGGCAATaGAGATCAGTTGTTTGCTTT +
Preference number: 5 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPESAGQ*RSVVCF
Trigger: AAAGCAAACAACTGATCTCAATTGCCCAGCACTTTC...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAACCAATCGGTATGAATTaGGTCAGTGGGAGCCCAGAG +
Preference number: 5 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKPIGMN*VSGSPE
Trigger: CTCTGGGCTCCCACTGACCAAATTCATACCGATTGG...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCATACACATACAAAACATaGGTAGTCAGTGGCAGATAT +
Preference number: 5 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSYTYKT*VVSGRY
Trigger: ATATCTGCCACTGACTACCAATGTTTTGTATGTGTA...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCACTACAAATTCATATGTaGAAGTCCTTACCGCCAAAA +
Preference number: 5 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSLQIHM*KSLPPK
Trigger: TTTTGGCGGTAAGGACTTCAACATATGAATTTGTAG...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTACAGAAATGGGCAATTaGGGATGCTGGTCATTCTTT +
Preference number: 5 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPTEMGN*GCWSFF
Trigger: AAAGAATGACCAGCATCCCAAATTGCCCATTTCTGT...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAACACGAGGTCAGGAGATaGAGACCATCATGGCTAACA +
Preference number: 5 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQHEVRR*RPSWLT
Trigger: TGTTAGCCATGATGGTCTCAATCTCCTGACCTCGTG...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTCTCAGCGATGATTTTTaGCAAAGGCAGTTTCAGCAT +
Preference number: 5 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPLSDDF*QRQFQH
Trigger: ATGCTGAAACTGCCTTTGCAAAAAATCATCGCTGAG...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACCCAGCAGGAAGGGAATaGGTTTTGGGAAAGGGCTGT +
Preference number: 5 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYPAGRE*VLGKGC
Trigger: ACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGG...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp TCCCAGCAGGAAGGGAATTGGTTTTGGGAAAGGGCTGTTACCGTCTTTGTTTCAGTTTTAAAGAATAATTaGGTGGGTAGGAGTTGGGAA +
Preference number: 5 (lower is better)
Translates to: SQQEGNWFWERAVTVFVSVLKNN*VGRSWE
Trigger: TTCCCAACTCCTACCCACCAAATTATTCTTTAAAAC...TGAAACAAAGACGGTAACAGCCCTTTCCCAAAACCAATTCCCTTCCTGCTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTTCAGTGGAAGAGGAGTaGTTGACAAAGGAACTCATT +
Preference number: 5 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPSVEEE*LTKELI
Trigger: AATGAGTTCCTTTGTCAACAACTCCTCTTCCACTGA...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACACAGACACATGCACATaGGCCTGGGGCTGCAGATTA +
Preference number: 5 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYTDTCT*AWGCRL
Trigger: TAATCTGCAGCCCCAGGCCAATGTGCATGTGTCTGT...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAAAGCTTCCAAGTGGAGTaGTCTAAGAGGCAGTTGGGT +
Preference number: 5 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQSFQVE*SKRQLG
Trigger: ACCCAACTGCCTCTTAGACAACTCCACTTGGAAGCT...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACGCTGAGTCAGGAGAATaGCTTGAACCTGAGAGGTGG +
Preference number: 5 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYAESGE*LEPERW
Trigger: CCACCTCTCAGGTTCAAGCAATTCTCCTGACTCAGC...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAAGCTGAGTCAGGAGAATaGCTTGAACCTGAGAGGTGG +
Preference number: 5 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKAESGE*LEPERW
Trigger: CCACCTCTCAGGTTCAAGCAATTCTCCTGACTCAGC...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTAACACTCCTACATTGTaGGTGGAGATGAAAATGGTG +
Preference number: 5 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPNTPTL*VEMKMV
Trigger: CACCATTTTCATCTCCACCAACAATGTAGGAGTGTT...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAACCAATGGTCCAAGCCTaGCTACTTATGAAAGTCCTG +
Preference number: 5 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQPMVQA*LLMKVL
Trigger: CAGGACTTTCATAAGTAGCAAGGCTTGGACCATTGG...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAACCGAGGAAGAGTTCCTaGTGTAAGTGCAAATTCCTC +
Preference number: 5 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQPRKSS*CKCKFL
Trigger: GAGGAATTTGCACTTACACAAGGAACTCTTCCTCGG...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACTATCCCTCAATGGACTaGGCTCTGTTGACCTTCCCT +
Preference number: 5 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYYPSMD*ALLTFP
Trigger: AGGGAAGGTCAACAGAGCCAAGTCCATTGAGGGATA...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAAGGAAGTGTGCCAGAATaGGTGAACGGAAGAGTCCTT +
Preference number: 5 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKGSVPE*VNGRVL
Trigger: AAGGACTCTTCCGTTCACCAATTCTGGCACACTTCC...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTGGAATTGAATCTTTATaGATCTGTGTGCTGCACTTG +
Preference number: 5 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPGIESL*ICVLHL
Trigger: CAAGTGCAGCACACAGATCAATAAAGATTCAATTCC...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAAAGCTTCCAAGTGGAGTaGTCTAAGAGGCAGTTGGGT +
Preference number: 5 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKSFQVE*SKRQLG
Trigger: ACCCAACTGCCTCTTAGACAACTCCACTTGGAAGCT...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACAGTCAGGAGAATTGCTaGAACCTGAGAGGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYSQENC*NLRGGG
Trigger: ACCTCCACCTCTCAGGTTCAAGCAATTCTCCTGACT...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAATTCTTGGGCATGTGTTaGATTTCCTGTTTCCATGGG +
Preference number: 5 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQFLGMC*ISCFHG
Trigger: CCCATGGAAACAGGAAATCAAACACATGCCCAAGAA...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACCCAATGGTCCAAGCCTaGCTACTTATGAAAGTCCTG +
Preference number: 5 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYPMVQA*LLMKVL
Trigger: CAGGACTTTCATAAGTAGCAAGGCTTGGACCATTGG...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACCCGAGGAAGAGTTCCTaGTGTAAGTGCAAATTCCTC +
Preference number: 5 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYPRKSS*CKCKFL
Trigger: GAGGAATTTGCACTTACACAAGGAACTCTTCCTCGG...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAACCGAGGAAGAGTTCCTaGTGTAAGTGCAAATTCCTC +
Preference number: 5 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKPRKSS*CKCKFL
Trigger: GAGGAATTTGCACTTACACAAGGAACTCTTCCTCGG...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTAATGACAGTTCAATATaGTCCTCATTTTCCAGGAGA +
Preference number: 5 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPNDSSI*SSFSRR
Trigger: TCTCCTGGAAAATGAGGACAATATTGAACTGTCATT...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAACAGGTTGCCCCTGTATaGATAATGTTAAGCCTGAGA +
Preference number: 5 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQQVAPV*IMLSLR
Trigger: TCTCAGGCTTAACATTATCAATACAGGGGCAACCTG...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTTACACATACAAAACATaGGTAGTCAGTGGCAGATAT +
Preference number: 5 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPYTYKT*VVSGRY
Trigger: ATATCTGCCACTGACTACCAATGTTTTGTATGTGTA...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAAGCCATAAAAGATTGGTaGGATCAGGTGTGCCATTTG +
Preference number: 5 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQAIKDW*DQVCHL
Trigger: CAAATGGCACACCTGATCCAACCAATCTTTTATGGC...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp CATATAAGAAGGGGAAATTTGGACACAGACACACCTAGAGGGAGAACATCACCTGTTTTAAAGAATAATTaGGTGGGTAGGAGTTGGGAA +
Preference number: 5 (lower is better)
Translates to: HIRRGNLDTDTPRGRTSPVLKNN*VGRSWE
Trigger: TTCCCAACTCCTACCCACCAAATTATTCTTTAAAAC...AGGTGATGTTCTCCCTCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAACAGGTTGCCCCTGTATaGATAATGTTAAGCCTGAGA +
Preference number: 5 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKQVAPV*IMLSLR
Trigger: TCTCAGGCTTAACATTATCAATACAGGGGCAACCTG...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAATCTGGATTTGCCAGTTaGTTTCCTCATCATGTCACT +
Preference number: 5 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQSGFAS*FPHHVT
Trigger: AGTGACATGATGAGGAAACAAACTGGCAAATCCAGA...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAAATAAGAAGGGGAAATTaGGACACAGACACACCTAGA +
Preference number: 5 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQIRRGN*DTDTPR
Trigger: TCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTAT...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAAACAGAAATGGGCAATTaGGGATGCTGGTCATTCTTT +
Preference number: 5 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQTEMGN*GCWSFF
Trigger: AAAGAATGACCAGCATCCCAAATTGCCCATTTCTGT...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAATTGGGCATGTCAGGTTaGAAATGTGTGTTAAGCTTC +
Preference number: 5 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQLGMSG*KCVLSF
Trigger: GAAGCTTAACACACATTTCAAACCTGACATGCCCAA...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAATGGCTTCTCAAAGTGTaGTCCATGAACCAACAAGAT +
Preference number: 5 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQWLLKV*SMNQQD
Trigger: ATCTTGTTGGTTCATGGACAACACTTTGAGAAGCCA...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641666.1
ENST00000642030.1
CDS-3UTR CAA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAATCCCATGTTCATGAATaGGGAGGCTTAGTATTCATA +
Preference number: 5 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQSHVHE*GGLVFI
Trigger: TATGAATACTAAGCCTCCCAATTCATGAACATGGGA...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACAAAGTATGTGTGAAATaGGGCCATAGCACCTTACCT +
Preference number: 5 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYKVCVK*GHSTLP
Trigger: AGGTAAGGTGCTATGGCCCAATTTCACACATACTTT...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAAGAAAGTGCTGGGCAATaGAGATCAGTTGTTTGCTTT +
Preference number: 5 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKESAGQ*RSVVCF
Trigger: AAAGCAAACAACTGATCTCAATTGCCCAGCACTTTC...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACTTGCTGTACACATGGTaGACAAAGAAAAGGAAGAGG +
Preference number: 5 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYLLYTW*TKKRKR
Trigger: CCTCTTCCTTTTCTTTGTCAACCATGTGTACAGCAA...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAAATAAGAAGGGGAAATTaGGACACAGACACACCTAGA +
Preference number: 5 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKIRRGN*DTDTPR
Trigger: TCTAGGTGTGTCTGTGTCCAAATTTCCCCTTCTTAT...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAACTCAGCGATGATTTTTaGCAAAGGCAGTTTCAGCAT +
Preference number: 5 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKLSDDF*QRQFQH
Trigger: ATGCTGAAACTGCCTTTGCAAAAAATCATCGCTGAG...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAATCAGTGGAAGAGGAGTaGTTGACAAAGGAACTCATT +
Preference number: 5 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKSVEEE*LTKELI
Trigger: AATGAGTTCCTTTGTCAACAACTCCTCTTCCACTGA...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACTTGGGCATGTCAGGTTaGAAATGTGTGTTAAGCTTC +
Preference number: 5 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYLGMSG*KCVLSF
Trigger: GAAGCTTAACACACATTTCAAACCTGACATGCCCAA...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACTGTCTACACAAAAATTaGTACACAAGGCTGGGCATG +
Preference number: 5 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYCLHKN*YTRLGM
Trigger: CATGCCCAGCCTTGTGTACAAATTTTTGTGTAGACA...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAAAACACTCCTACATTGTaGGTGGAGATGAAAATGGTG +
Preference number: 5 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKNTPTL*VEMKMV
Trigger: CACCATTTTCATCTCCACCAACAATGTAGGAGTGTT...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAAGAGAATATGGGGAAATaGGAACACTCCTACATTGTT +
Preference number: 5 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQENMGK*EHSYIV
Trigger: AACAATGTAGGAGTGTTCCAATTTCCCCATATTCTC...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAATCCCATGTTCATGAATaGGGAGGCTTAGTATTCATA +
Preference number: 5 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKSHVHE*GGLVFI
Trigger: TATGAATACTAAGCCTCCCAATTCATGAACATGGGA...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACTCCCATGTTCATGAATaGGGAGGCTTAGTATTCATA +
Preference number: 5 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYSHVHE*GGLVFI
Trigger: TATGAATACTAAGCCTCCCAATTCATGAACATGGGA...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp GACAAGCAATTAACAAGTTTTGATGAGAATATGGGGAAATTGGAACACTCCTACATTGAGATCAGTTGTTaGCTTTACATGAAGGTCCTG +
Preference number: 5 (lower is better)
Translates to: DKQLTSFDENMGKLEHSYIEISC*LYMKVL
Trigger: CAGGACCTTCATGTAAAGCAAACAACTGATCTCAAT...GTAGGAGTGTTCCAATTTCCCCATATTCTCATCAAAACTTGTTAATTGCTTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp ATTTGTAAAAACAAGCAGCAGGGTGAATTTGGTCTGCATGTTGTAGTTTGCCAATGTTTAATATGTGTCTaGTGGCTTACAACACAGACA +
Preference number: 5 (lower is better)
Translates to: ICKNKQQGEFGLHVVVCQCLICV*WLTTQT
Trigger: TGTCTGTGTTGTAAGCCACAAGACACATATTAAACA...TTGGCAAACTACAACATGCAGACCAAATTCACCCTGCTGCTTGTTTTTACAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAAAATGACAGTTCAATATaGTCCTCATTTTCCAGGAGA +
Preference number: 5 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKNDSSI*SSFSRR
Trigger: TCTCCTGGAAAATGAGGACAATATTGAACTGTCATT...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAATACACATACAAAACATaGGTAGTCAGTGGCAGATAT +
Preference number: 5 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKYTYKT*VVSGRY
Trigger: ATATCTGCCACTGACTACCAATGTTTTGTATGTGTA...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS-3UTR CAA 90 bp ATTAAAACCACACCGAGTTACCACTCCACATCTGTTGGAATGGCTAAAATAAAATGTTTAATATGTGTCTaGTGGCTTACAACACAGACA +
Preference number: 5 (lower is better)
Translates to: IKTTPSYHSTSVGMAKIKCLICV*WLTTQT
Trigger: TGTCTGTGTTGTAAGCCACAAGACACATATTAAACA...TTTTATTTTAGCCATTCCAACAGATGTGGAGTGGTAACTCGGTGTGGTTTTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
CDS GCA 72 bp CTTGGCTCTGTTGACCTTCCCTCCTTGCACAATCGGTaGAGGCAGGGCAAGGGGGTGGGTGTCAGGGGCTGG +
Preference number: 6 (lower is better)
Translates to: LGSVDLPSLHNR*RQGKGVGVRGW
Trigger: CCAGCCCCTGACACCCACCCCCTTGCCCTGCCTGCACCGATTGTGCAAGGAGGGAAGGTCAACAGAGCCAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000601611.6
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
ENST00000672931.1
CDS GCA 72 bp CCCTCAATGGACTTGGCTCTGTTGACCTTCCCTCCTTaGACAATCGGTGCAGGCAGGGCAAGGGGGTGGGTG +
Preference number: 6 (lower is better)
Translates to: PSMDLALLTFPP*TIGAGRARGWV
Trigger: CACCCACCCCCTTGCCCTGCCTGCACCGATTGTGCAAGGAGGGAAGGTCAACAGAGCCAAGTCCATTGAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000601611.6
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
ENST00000672931.1
CDS CAA 72 bp TCCCTCAATGGACTTGGCTCTGTTGACCTTCCCTCCTaGCACAATCGGTGCAGGCAGGGCAAGGGGGTGGGT +
Preference number: 6 (lower is better)
Translates to: SLNGLGSVDLPS*HNRCRQGKGVG
Trigger: ACCCACCCCCTTGCCCTGCCTGCACCGATTGTGCAAGGAGGGAAGGTCAACAGAGCCAAGTCCATTGAGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000601611.6
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
ENST00000672931.1
CDS CAA 90 bp CTCTTGATATCCCTCAATGGACTTGGCTCTGTTGACCTTCCCTCCTaGCACAATCGGTGCAGGCAGGGCAAGGGGGTGGGTGTCAGGGGC +
Preference number: 6 (lower is better)
Translates to: LLISLNGLGSVDLPS*HNRCRQGKGVGVRG
Trigger: GCCCCTGACACCCACCCCCTTGCCCTGCCTGCACCGATTGTGCAAGGAGGGAAGGTCAACAGAGCCAAGTCCATTGAGGGATATCAAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000601611.6
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
ENST00000672931.1
CDS TCA 72 bp AGAGGCATAGAGAAGGTGCTCTTGGTCTGGGGCTGGTaGACTGCAGGTGGGTTCAGGAGGGGATCTCTCCGA +
Preference number: 6 (lower is better)
Translates to: RGIEKVLLVWGW*TAGGFRRGSLR
Trigger: TCGGAGAGATCCCCTCCTGAACCCACCTGCAGTTCACCAGCCCCAGACCAAGAGCACCTTCTCTATGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000601611.6
ENST00000641666.1
ENST00000642000.1
CDS GCA 72 bp CATAGAGAAGGTGCTCTTGGTCTGGGGCTGGTGAACTaGAGGTGGGTTCAGGAGGGGATCTCTCCGAGGAAG +
Preference number: 6 (lower is better)
Translates to: HREGALGLGLVN*RWVQEGISPRK
Trigger: CTTCCTCGGAGAGATCCCCTCCTGAACCCACCTGCAGTTCACCAGCCCCAGACCAAGAGCACCTTCTCTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000601611.6
ENST00000641666.1
ENST00000642000.1
CDS GCA 72 bp CATAGAGAAGGTGCTCTTGGTCTGGGGCTGGTGAACTaGAGGTGGGTTCTGTTCTCCCAACAGTGTGGCTCT +
Preference number: 6 (lower is better)
Translates to: HREGALGLGLVN*RWVLFSQQCGS
Trigger: AGAGCCACACTGTTGGGAGAACAGAACCCACCTGCAGTTCACCAGCCCCAGACCAAGAGCACCTTCTCTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642030.1
CDS TCA 72 bp GCTTCTCTTGATATCCCTCAATGGACTTGGCTCTGTTaGCCTTCCCTCCTTGCACAATCGGTGCAGGCAGGG +
Preference number: 6 (lower is better)
Translates to: ASLDIPQWTWLC*PSLLAQSVQAG
Trigger: CCCTGCCTGCACCGATTGTGCAAGGAGGGAAGGTCAACAGAGCCAAGTCCATTGAGGGATATCAAGAGAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000601611.6
ENST00000641666.1
ENST00000642000.1
ENST00000642030.1
ENST00000672931.1
CDS TCA 72 bp AGAGGCATAGAGAAGGTGCTCTTGGTCTGGGGCTGGTaGACTGCAGGTGGGTTCTCACACATCTTACACAAA +
Preference number: 6 (lower is better)
Translates to: RGIEKVLLVWGW*TAGGFSHILHK
Trigger: TTTGTGTAAGATGTGTGAGAACCCACCTGCAGTTCACCAGCCCCAGACCAAGAGCACCTTCTCTATGCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672931.1
CDS GCA 72 bp CATAGAGAAGGTGCTCTTGGTCTGGGGCTGGTGAACTaGAGGTGGGTTCTCACACATCTTACACAAAGTCAG +
Preference number: 6 (lower is better)
Translates to: HREGALGLGLVN*RWVLTHLTQSQ
Trigger: CTGACTTTGTGTAAGATGTGTGAGAACCCACCTGCAGTTCACCAGCCCCAGACCAAGAGCACCTTCTCTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672931.1
CDS CCA 72 bp CGAGCAGACAAGATGGCGCAGATCAAGGGTTTACTCTaGCTTCTCTTGATATCCCTCAATGGACTTGGCTCT +
Preference number: 6 (lower is better)
Translates to: RADKMAQIKGLL*LLLISLNGLGS
Trigger: AGAGCCAAGTCCATTGAGGGATATCAAGAGAAGCCAGAGTAAACCCTTGATCTGCGCCATCTTGTCTGCTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641666.1
ENST00000642030.1
CDS TCA 72 bp AGATGGCGCAGATCAAGGGTTTACTCTGGCTTCTCTTaGTATCCCTCAATGGACTTGGCTCTGTTGACCTTC +
Preference number: 6 (lower is better)
Translates to: RWRRSRVYSGFS*YPSMDLALLTF
Trigger: GAAGGTCAACAGAGCCAAGTCCATTGAGGGATATCAAGAGAAGCCAGAGTAAACCCTTGATCTGCGCCATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641666.1
ENST00000642030.1
CDS CAA 72 bp AAGTTTTCAAGATGGTGGCTCCATCTTCCCTTCTCTTaGTCAGCCACGAGCAGACAAGATGGCGCAGATCAA +
Preference number: 6 (lower is better)
Translates to: KFSRWWLHLPFS*SATSRQDGADQ
Trigger: TTGATCTGCGCCATCTTGTCTGCTCGTGGCTGACAAAGAGAAGGGAAGATGGAGCCACCATCTTGAAAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641666.1
ENST00000642030.1
CDS TCA 72 bp TGTGAACAAGGACTTAGGGTTTACTCTGGCTTCTCTTaGTATCCCTCAATGGACTTGGCTCTGTTGACCTTC +
Preference number: 6 (lower is better)
Translates to: CEQGLRVYSGFS*YPSMDLALLTF
Trigger: GAAGGTCAACAGAGCCAAGTCCATTGAGGGATATCAAGAGAAGCCAGAGTAAACCCTAAGTCCTTGTTCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601611.6
CDS TCA 72 bp CATGGGGATAAAATAAGGGTTTACTCTGGCTTCTCTTaGTATCCCTCAATGGACTTGGCTCTGTTGACCTTC +
Preference number: 6 (lower is better)
Translates to: HGDKIRVYSGFS*YPSMDLALLTF
Trigger: GAAGGTCAACAGAGCCAAGTCCATTGAGGGATATCAAGAGAAGCCAGAGTAAACCCTTATTTTATCCCCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642000.1
CDS CCA 72 bp TGCAGAATCCCTGGTCAGACGCAGATAGTAAGGTTATaGGAGTCCTCAGTGAGGCTTTTCTTTTTAATGAAA +
Preference number: 6 (lower is better)
Translates to: CRIPGQTQIVRL*ESSVRLFFLMK
Trigger: TTTCATTAAAAAGAAAAGCCTCACTGAGGACTCCCATAACCTTACTATCTGCGTCTGACCAGGGATTCTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641666.1
ENST00000642030.1
CDS CAA 72 bp ATACTTGTACCCTCTATAGCCTGGCTTCTCAAAGTGTaGTCCATGAACCAACAAGATCAACAAGAGTTTCTT +
Preference number: 6 (lower is better)
Translates to: ILVPSIAWLLKV*SMNQQDQQEFL
Trigger: AAGAAACTCTTGTTGATCTTGTTGGTTCATGGACAACACTTTGAGAAGCCAGGCTATAGAGGGTACAAGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641666.1
ENST00000642030.1
CDS CCA 72 bp AATTCTTCCATCCTTTTCTTTGCTACCATCGGGATCTaGAAATGTAGTGTTAGTTCCATAATACTTGTACCC +
Preference number: 6 (lower is better)
Translates to: NSSILFFATIGI*KCSVSSIILVP
Trigger: GGGTACAAGTATTATGGAACTAACACTACATTTCCAGATCCCGATGGTAGCAAAGAAAAGGATGGAAGAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641666.1
ENST00000642030.1