Pregenerated sensors for OR6T1 (Homo sapiens)
Ensembl gene IDs: ENSG00000181499Ensembl transcript IDs: ENST00000321252.3
Found 10 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | AGTAACACCAACGTAGAGAGCATGAAAGCCACCAGTTTCAGCAGGTaGGTGTCCCCACAAGAAAGCCTGAGCAAGGGCCAACTGTCACGA | + |
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Preference number: 5 (lower is better) Translates to: SNTNVESMKATSFSR*VSPQESLSKGQLSR Trigger: TCGTGACAGTTGGCCCTTGCTCAGGCTTTCTTGTGGGGACACCCACCTGCTGAAACTGGTGGCTTTCATGCTCTCTACGTTGGTGTTACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000321252.3 |
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| CDS TCA 90 bp | GCTCAGGACGGAGGCACCTTTGTTGAGCAGTTTGGACTGAGCCTCTaGCATACGAATGTAGAGAAAGATGGAACTGCCATAGATGATGAC | + |
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Preference number: 5 (lower is better) Translates to: AQDGGTFVEQFGLSL*HTNVEKDGTAIDDD Trigger: GTCATCATCTATGGCAGTTCCATCTTTCTCTACATTCGTATGTCAGAGGCTCAGTCCAAACTGCTCAACAAAGGTGCCTCCGTCCTGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000321252.3 |
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| CDS TCA 90 bp | TTACAATGTAGGTCACCATTAACCCCAGGAACACCAGGAACTGTATaGGGTGGCTACTGGGGAAACCCAGAAGGACAAAGCTTGTTACCT | + |
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Preference number: 5 (lower is better) Translates to: LQCRSPLTPGTPGTV*GGYWGNPEGQSLLP Trigger: AGGTAACAAGCTTTGTCCTTCTGGGTTTCCCCAGTAGCCACCTCATACAGTTCCTGGTGTTCCTGGGGTTAATGGTGACCTACATTGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000321252.3 |
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| CDS CAA 90 bp | GTGAGCCTGGGCCACCCCAAGGCTTCTCTCAGTGCTTGCTGCACCTaGTCATTGCGGAGAGTGAAGATGAATGGGTTCAAGAGGGGTGTG | + |
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Preference number: 6 (lower is better) Translates to: VSLGHPKASLSACCT*SLRRVKMNGFKRGV Trigger: CACACCCCTCTTGAACCCATTCATCTTCACTCTCCGCAATGACAAGGTGCAGCAAGCACTGAGAGAAGCCTTGGGGTGGCCCAGGCTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000321252.3 |
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| CDS GCA 72 bp | GTGAGCCTGGGCCACCCCAAGGCTTCTCTCAGTGCTTaGTGCACCTTGTCATTGCGGAGAGTGAAGATGAAT | + |
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Preference number: 6 (lower is better) Translates to: VSLGHPKASLSA*CTLSLRRVKMN Trigger: ATTCATCTTCACTCTCCGCAATGACAAGGTGCAGCAAGCACTGAGAGAAGCCTTGGGGTGGCCCAGGCTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000321252.3 |
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| CDS CAA 72 bp | AGTGAGCCTGGGCCACCCCAAGGCTTCTCTCAGTGCTaGCTGCACCTTGTCATTGCGGAGAGTGAAGATGAA | + |
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Preference number: 6 (lower is better) Translates to: SEPGPPQGFSQC*LHLVIAESEDE Trigger: TTCATCTTCACTCTCCGCAATGACAAGGTGCAGCAAGCACTGAGAGAAGCCTTGGGGTGGCCCAGGCTCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000321252.3 |
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| CDS CCA 72 bp | AACGTAGAGAGCATGAAAGCCACCAGTTTCAGCAGGTaGGTGTCCCCACAAGAAAGCCTGAGCAAGGGCCAA | + |
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Preference number: 6 (lower is better) Translates to: NVESMKATSFSR*VSPQESLSKGQ Trigger: TTGGCCCTTGCTCAGGCTTTCTTGTGGGGACACCCACCTGCTGAAACTGGTGGCTTTCATGCTCTCTACGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000321252.3 |
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| CDS TCA 72 bp | AGGTCACCATTAACCCCAGGAACACCAGGAACTGTATaGGGTGGCTACTGGGGAAACCCAGAAGGACAAAGC | + |
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Preference number: 6 (lower is better) Translates to: RSPLTPGTPGTV*GGYWGNPEGQS Trigger: GCTTTGTCCTTCTGGGTTTCCCCAGTAGCCACCTCATACAGTTCCTGGTGTTCCTGGGGTTAATGGTGACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000321252.3 |
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| CDS TCA 72 bp | GAAGTAGAGGTAGGACTGGATGATGCAGCTGACAAATaGGATGGTGTGATCCCCCGTGAGGATGACGACAAG | + |
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Preference number: 6 (lower is better) Translates to: EVEVGLDDAADK*DGVIPREDDDK Trigger: CTTGTCGTCATCCTCACGGGGGATCACACCATCTCATTTGTCAGCTGCATCATCCAGTCCTACCTCTACTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000321252.3 |
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| CDS TCA 72 bp | GGAGGCACCTTTGTTGAGCAGTTTGGACTGAGCCTCTaGCATACGAATGTAGAGAAAGATGGAACTGCCATA | + |
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Preference number: 6 (lower is better) Translates to: GGTFVEQFGLSL*HTNVEKDGTAI Trigger: TATGGCAGTTCCATCTTTCTCTACATTCGTATGTCAGAGGCTCAGTCCAAACTGCTCAACAAAGGTGCCTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000321252.3 |
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