Pregenerated sensors for OR6N1 (Homo sapiens)
Ensembl gene IDs: ENSG00000197403Ensembl transcript IDs: ENST00000641189.1, ENST00000641846.1
Found 77 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACTGCACTACATCATGTTGAAGGGATGTGTACTTTCCCTAGTCTCTaGTCTCAAGCCAAATGTGGCTCCAGCAGACAGTATGAAGGTCGC | + |
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Preference number: 1 (lower is better) Translates to: TALHHVEGMCTFPSL*SQAKCGSSRQYEGR Trigger: GCGACCTTCATACTGTCTGCTGGAGCCACATTTGGCTTGAGACCAGAGACTAGGGAAAGTACACATCCCTTCAACATGATGTAGTGCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641846.1 |
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| 3UTR TCA 90 bp | TACATTATACTGGCCATAGATATTAGGACCACTAAGACAGGTACATaGAACTTGTCAGAACAGAACTGTGACAAACTATACTTTTCAAGT | + |
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Preference number: 1 (lower is better) Translates to: YIILAIDIRTTKTGT*NLSEQNCDKLYFSS Trigger: ACTTGAAAAGTATAGTTTGTCACAGTTCTGTTCTGACAAGTTTCATGTACCTGTCTTAGTGGTCCTAATATCTATGGCCAGTATAATGTA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641846.1 |
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| 3UTR-3UTR TCA 90 bp | TGGAAGTCAGTCAGCACTTGCTGCAGCTCCACCACCCCACATAGAAAAGCACTGGTCTCTGGCCACTGTTaGTCCCTGGGGCCACCATAT | + |
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Preference number: 2 (lower is better) Translates to: WKSVSTCCSSTTPHRKALVSGHC*SLGPPY Trigger: ATATGGTGGCCCCAGGGATCAACAGTGGCCAGAGAC...CAGTGCTTTTCTATGTGGGGTGGTGGAGCTGCAGCAAGTGCTGACTGACTTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000641846.1 |
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| 3UTR-3UTR CCA 90 bp | ATGTGTACTTTCCCTAGTCTCTGGTCTCAAGCCAAATGTGGCTCCAGCAGACAGGCCACTGTTGATCCCTaGGGCCACCATATCCTCAGG | + |
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Preference number: 2 (lower is better) Translates to: MCTFPSLWSQAKCGSSRQATVDP*GHHILR Trigger: CCTGAGGATATGGTGGCCCCAGGGATCAACAGTGGC...CTGTCTGCTGGAGCCACATTTGGCTTGAGACCAGAGACTAGGGAAAGTACACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641846.1 |
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| 3UTR-3UTR CCA 90 bp | TGGAAGTCAGTCAGCACTTGCTGCAGCTCCACCACCCCACATAGAAAAGCACTGTTAGTTTCTCGTCTCTaGCCACTGTTGATCCCTGGG | + |
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Preference number: 2 (lower is better) Translates to: WKSVSTCCSSTTPHRKALLVSRL*PLLIPG Trigger: CCCAGGGATCAACAGTGGCCAGAGACGAGAAACTAA...CAGTGCTTTTCTATGTGGGGTGGTGGAGCTGCAGCAAGTGCTGACTGACTTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641846.1 |
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| 3UTR-3UTR CCA 90 bp | CTTTCCACTGACTCAACTCCTATACTTTCATACATTATACTGGCCATAGATATTCCTCAGGCCCGGCCTTaGCCTACTCTCAGCCCCAAC | + |
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Preference number: 2 (lower is better) Translates to: LSTDSTPILSYIILAIDIPQARP*PTLSPN Trigger: GTTGGGGCTGAGAGTAGGCCAAGGCCGGGCCTGAGG...AATATCTATGGCCAGTATAATGTATGAAAGTATAGGAGTTGAGTCAGTGGAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641846.1 |
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| 3UTR-3UTR GCA 90 bp | AGTATACTTGTATACTATACAAGTATTCCTTCTGGCTGGTTTGCTCCTTTCCTTACATGTCAGACACTGTaGACTGTGGTTTACAAATCT | + |
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Preference number: 2 (lower is better) Translates to: SILVYYTSIPSGWFAPFLTCQTL*TVVYKS Trigger: AGATTTGTAAACCACAGTGCACAGTGTCTGACATGT...AAGGAAAGGAGCAAACCAGCCAGAAGGAATACTTGTATAGTATACAAGTATACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641846.1 |
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| 3UTR-3UTR CCA 90 bp | CTTTCCACTGACTCAACTCCTATACTTTCATACATTATACTGGCCATAGATATTTACAAGTATTCCTTCTaGCTGGTTTGCTCCTTTCCT | + |
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Preference number: 2 (lower is better) Translates to: LSTDSTPILSYIILAIDIYKYSF*LVCSFP Trigger: AGGAAAGGAGCAAACCAGCCAGAAGGAATACTTGTA...AATATCTATGGCCAGTATAATGTATGAAAGTATAGGAGTTGAGTCAGTGGAAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641846.1 |
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| 3UTR-3UTR CAA 90 bp | AAGGGATGTGTACTTTCCCTAGTCTCTGGTCTCAAGCCAAATGTGGCTCCAGCATCCTCAGGCCCGGCCTaGGCCTACTCTCAGCCCCAA | + |
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Preference number: 3 (lower is better) Translates to: KGCVLSLVSGLKPNVAPASSGPA*AYSQPQ Trigger: TTGGGGCTGAGAGTAGGCCAAGGCCGGGCCTGAGGA...TGCTGGAGCCACATTTGGCTTGAGACCAGAGACTAGGGAAAGTACACATCCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641846.1 |
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| 3UTR CCA 72 bp | ATTTTTAGTTTCTCGTCTCTGGCCACTGTTGATCCCTaGGGCCACCATATCCTCAGGCCCGGCCTTGGCCTA | + |
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Preference number: 3 (lower is better) Translates to: IFSFSSLATVDP*GHHILRPGLGL Trigger: TAGGCCAAGGCCGGGCCTGAGGATATGGTGGCCCCAGGGATCAACAGTGGCCAGAGACGAGAAACTAAAAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000641846.1 |
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| 3UTR-3UTR CAA 90 bp | AGTATACTTGTATACTATACAAGTATTCCTTCTGGCTGGTTTGCTCCTTTCCTTGAAGTCAGTCAGCACTaGCTGCAGCTCCACCACCCC | + |
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Preference number: 3 (lower is better) Translates to: SILVYYTSIPSGWFAPFLEVSQH*LQLHHP Trigger: GGGGTGGTGGAGCTGCAGCAAGTGCTGACTGACTTC...AAGGAAAGGAGCAAACCAGCCAGAAGGAATACTTGTATAGTATACAAGTATACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641846.1 |
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| 3UTR CCA 72 bp | CATCATGTTGAAGGGATGTGTACTTTCCCTAGTCTCTaGTCTCAAGCCAAATGTGGCTCCAGCAGACAGTAT | + |
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Preference number: 3 (lower is better) Translates to: HHVEGMCTFPSL*SQAKCGSSRQY Trigger: ATACTGTCTGCTGGAGCCACATTTGGCTTGAGACCAGAGACTAGGGAAAGTACACATCCCTTCAACATGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641846.1 |
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| 3UTR TCA 72 bp | CTGGCCATAGATATTAGGACCACTAAGACAGGTACATaGAACTTGTCAGAACAGAACTGTGACAAACTATAC | + |
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Preference number: 3 (lower is better) Translates to: LAIDIRTTKTGT*NLSEQNCDKLY Trigger: GTATAGTTTGTCACAGTTCTGTTCTGACAAGTTTCATGTACCTGTCTTAGTGGTCCTAATATCTATGGCCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641846.1 |
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| 3UTR TCA 72 bp | TGGTTCGATGTAAAAAGTAATCCTATTTCTTTCCACTaGCTCAACTCCTATACTTTCATACATTATACTGGC | + |
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Preference number: 3 (lower is better) Translates to: WFDVKSNPISFH*LNSYTFIHYTG Trigger: GCCAGTATAATGTATGAAAGTATAGGAGTTGAGTCAGTGGAAAGAAATAGGATTACTTTTTACATCGAACCA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000641846.1 |
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| CDS-3UTR CCA 90 bp | TCCCTGGGGCCACCATATCCTCAGGCCCGGCCTTGGCCTACTCTCAGCCCCAACAGGCACACGTGGAGATaGCCTTCCTCTTGCCGGCAG | + |
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Preference number: 4 (lower is better) Translates to: SLGPPYPQARPWPTLSPNRHTWR*PSSCRQ Trigger: CTGCCGGCAAGAGGAAGGCCATCTCCACGTGTGCCT...GTTGGGGCTGAGAGTAGGCCAAGGCCGGGCCTGAGGATATGGTGGCCCCAGGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641846.1 |
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| CDS-3UTR CCA 90 bp | TCCCTGGGGCCACCATATCCTCAGGCCCGGCCTTGGCCTACTCTCAGCCCCAACCGTGCTGAATGCGATTaGGGCCACAGAATGGGAGGC | + |
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Preference number: 4 (lower is better) Translates to: SLGPPYPQARPWPTLSPNRAECD*GHRMGG Trigger: GCCTCCCATTCTGTGGCCCCAATCGCATTCAGCACG...GTTGGGGCTGAGAGTAGGCCAAGGCCGGGCCTGAGGATATGGTGGCCCCAGGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641846.1 |
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| CDS-3UTR CCA 90 bp | ACTGTTGATCCCTGGGGCCACCATATCCTCAGGCCCGGCCTTGGCCTACTCTCACCTCAGGCCCGGCCTTaGCCTACTCTCAGCCCCAAC | + |
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Preference number: 4 (lower is better) Translates to: TVDPWGHHILRPGLGLLSPQARP*PTLSPN Trigger: GTTGGGGCTGAGAGTAGGCCAAGGCCGGGCCTGAGG...TGAGAGTAGGCCAAGGCCGGGCCTGAGGATATGGTGGCCCCAGGGATCAACAGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641846.1 |
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| CDS-3UTR TCA 90 bp | GTTGATCCCTGGGGCCACCATATCCTCAGGCCCGGCCTTGGCCTACTCTCAGCCTGCTCTGCTAGAGCTTaGCTCTGGAAGCCCAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: VDPWGHHILRPGLGLLSACSARA*LWKPSH Trigger: GTGGCTGGGCTTCCAGAGTCAAGCTCTAGCAGAGCA...GGCTGAGAGTAGGCCAAGGCCGGGCCTGAGGATATGGTGGCCCCAGGGATCAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641846.1 |
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| CDS-3UTR TCA 90 bp | GTTGATCCCTGGGGCCACCATATCCTCAGGCCCGGCCTTGGCCTACTCTCAGCCGTCTCTGGCCACTGTTaGTCCCTGGGGCCACCATAT | + |
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Preference number: 4 (lower is better) Translates to: VDPWGHHILRPGLGLLSAVSGHC*SLGPPY Trigger: ATATGGTGGCCCCAGGGATCAACAGTGGCCAGAGAC...GGCTGAGAGTAGGCCAAGGCCGGGCCTGAGGATATGGTGGCCCCAGGGATCAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641846.1 |
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| CDS-3UTR CCA 90 bp | TCCCTGGGGCCACCATATCCTCAGGCCCGGCCTTGGCCTACTCTCAGCCCCAACTGGACACCCTGGAGATaGGGGAAGCCCAAGATGATG | + |
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Preference number: 4 (lower is better) Translates to: SLGPPYPQARPWPTLSPNWTPWR*GKPKMM Trigger: CATCATCTTGGGCTTCCCCCATCTCCAGGGTGTCCA...GTTGGGGCTGAGAGTAGGCCAAGGCCGGGCCTGAGGATATGGTGGCCCCAGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000641846.1 |
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| CDS-3UTR TCA 90 bp | TTGATCCCTGGGGCCACCATATCCTCAGGCCCGGCCTTGGCCTACTCTCAGCCCAAAGTGTTGGGGTCATaGGGGTTGGGTAGTGGAGGG | + |
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Preference number: 4 (lower is better) Translates to: LIPGATISSGPALAYSQPKVLGS*GLGSGG Trigger: CCCTCCACTACCCAACCCTCATGACCCCAACACTTT...GGGCTGAGAGTAGGCCAAGGCCGGGCCTGAGGATATGGTGGCCCCAGGGATCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000641846.1 |
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| CDS-3UTR TCA 90 bp | GATCCCTGGGGCCACCATATCCTCAGGCCCGGCCTTGGCCTACTCTCAGCCCCATCACAAAAGACGTGCTaGATGCGATTGGGGCCACAG | + |
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Preference number: 4 (lower is better) Translates to: DPWGHHILRPGLGLLSAPSQKTC*MRLGPQ Trigger: CTGTGGCCCCAATCGCATTCAGCACGTCTTTTGTGA...TGGGGCTGAGAGTAGGCCAAGGCCGGGCCTGAGGATATGGTGGCCCCAGGGATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000641846.1 |
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| CDS-3UTR CCA 90 bp | GATCCCTGGGGCCACCATATCCTCAGGCCCGGCCTTGGCCTACTCTCAGCCCCACTCTGCACAAAGTGTTaGGGTCATGAGGGTTGGGTA | + |
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Preference number: 4 (lower is better) Translates to: DPWGHHILRPGLGLLSAPLCTKC*GHEGWV Trigger: TACCCAACCCTCATGACCCCAACACTTTGTGCAGAG...TGGGGCTGAGAGTAGGCCAAGGCCGGGCCTGAGGATATGGTGGCCCCAGGGATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641846.1 |
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| CDS-3UTR TCA 90 bp | TTGATCCCTGGGGCCACCATATCCTCAGGCCCGGCCTTGGCCTACTCTCAGCCCCTGGTCATAGTCCAGTaGGTAGCTCTTCTTCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: LIPGATISSGPALAYSQPLVIVQ*VALLQL Trigger: CAGCTGAAGAAGAGCTACTCACTGGACTATGACCAG...GGGCTGAGAGTAGGCCAAGGCCGGGCCTGAGGATATGGTGGCCCCAGGGATCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641846.1 |
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| CDS-3UTR TCA 90 bp | ACTGTTGATCCCTGGGGCCACCATATCCTCAGGCCCGGCCTTGGCCTACTCTCATCCTCACAGCCTCCTTaGTCTCCTTGTTGCGCAAGC | + |
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Preference number: 4 (lower is better) Translates to: TVDPWGHHILRPGLGLLSSSQPP*SPCCAS Trigger: GCTTGCGCAACAAGGAGATCAAGGAGGCTGTGAGGA...TGAGAGTAGGCCAAGGCCGGGCCTGAGGATATGGTGGCCCCAGGGATCAACAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641846.1 |
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| CDS-3UTR GCA 90 bp | TCCCTGGGGCCACCATATCCTCAGGCCCGGCCTTGGCCTACTCTCAGCCCCAACCAAGATGATGAATTCTaGTACCTGGCTCCAGTTCCC | + |
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Preference number: 4 (lower is better) Translates to: SLGPPYPQARPWPTLSPNQDDEF*YLAPVP Trigger: GGGAACTGGAGCCAGGTAGCAGAATTCATCATCTTG...GTTGGGGCTGAGAGTAGGCCAAGGCCGGGCCTGAGGATATGGTGGCCCCAGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641846.1 |
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| CDS-3UTR GCA 90 bp | TCCCTGGGGCCACCATATCCTCAGGCCCGGCCTTGGCCTACTCTCAGCCCCAACGCCAATGGCAATCTCTaGACAAAGTGTTGGGGTCAT | + |
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Preference number: 4 (lower is better) Translates to: SLGPPYPQARPWPTLSPNANGNL*TKCWGH Trigger: ATGACCCCAACACTTTGTGCAGAGATTGCCATTGGC...GTTGGGGCTGAGAGTAGGCCAAGGCCGGGCCTGAGGATATGGTGGCCCCAGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000641846.1 |
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| CDS-3UTR CCA 90 bp | ATCCCTGGGGCCACCATATCCTCAGGCCCGGCCTTGGCCTACTCTCAGCCCCAATTAGTTTCTCGTCTCTaGCCACTGTTGATCCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: IPGATISSGPALAYSQPQLVSRL*PLLIPG Trigger: CCCAGGGATCAACAGTGGCCAGAGACGAGAAACTAA...TTGGGGCTGAGAGTAGGCCAAGGCCGGGCCTGAGGATATGGTGGCCCCAGGGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641846.1 |
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| CDS-3UTR CCA 90 bp | CCACTGTTGATCCCTGGGGCCACCATATCCTCAGGCCCGGCCTTGGCCTACTCTATGAATTCTGCTACCTaGCTCCAGTTCCCTGTGTCC | + |
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Preference number: 4 (lower is better) Translates to: PLLIPGATISSGPALAYSMNSAT*LQFPVS Trigger: GGACACAGGGAACTGGAGCCAGGTAGCAGAATTCAT...AGAGTAGGCCAAGGCCGGGCCTGAGGATATGGTGGCCCCAGGGATCAACAGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641846.1 |
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| CDS-3UTR CCA 90 bp | TTGATCCCTGGGGCCACCATATCCTCAGGCCCGGCCTTGGCCTACTCTCAGCCCCCAACCAACAGCCAATaGCAATCTCTGCACAAAGTG | + |
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Preference number: 4 (lower is better) Translates to: LIPGATISSGPALAYSQPPTNSQ*QSLHKV Trigger: CACTTTGTGCAGAGATTGCCATTGGCTGTTGGTTGG...GGGCTGAGAGTAGGCCAAGGCCGGGCCTGAGGATATGGTGGCCCCAGGGATCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000641846.1 |
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| CDS-3UTR CCA 90 bp | GTTGATCCCTGGGGCCACCATATCCTCAGGCCCGGCCTTGGCCTACTCTCAGCCACTTTCCCTAGTCTCTaGTCTCAAGCCAAATGTGGC | + |
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Preference number: 4 (lower is better) Translates to: VDPWGHHILRPGLGLLSATFPSL*SQAKCG Trigger: GCCACATTTGGCTTGAGACCAGAGACTAGGGAAAGT...GGCTGAGAGTAGGCCAAGGCCGGGCCTGAGGATATGGTGGCCCCAGGGATCAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641846.1 |
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| CDS-3UTR GCA 90 bp | CTGTTGATCCCTGGGGCCACCATATCCTCAGGCCCGGCCTTGGCCTACTCTCAGGTTCCCTGTGTCCATTaGTCACCATTCATGTCCCTA | + |
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Preference number: 4 (lower is better) Translates to: LLIPGATISSGPALAYSQVPCVH*SPFMSL Trigger: TAGGGACATGAATGGTGAGCAATGGACACAGGGAAC...CTGAGAGTAGGCCAAGGCCGGGCCTGAGGATATGGTGGCCCCAGGGATCAACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641846.1 |
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| CDS-3UTR GCA 90 bp | TTGATCCCTGGGGCCACCATATCCTCAGGCCCGGCCTTGGCCTACTCTCAGCCCTCCTTCTGGCTGGTTTaGTCCTTTCCTTTGGAGAAA | + |
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Preference number: 4 (lower is better) Translates to: LIPGATISSGPALAYSQPSFWLV*SFPLEK Trigger: TTTCTCCAAAGGAAAGGAGCAAACCAGCCAGAAGGA...GGGCTGAGAGTAGGCCAAGGCCGGGCCTGAGGATATGGTGGCCCCAGGGATCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641846.1 |
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| CDS-3UTR TCA 90 bp | TCCCTGGGGCCACCATATCCTCAGGCCCGGCCTTGGCCTACTCTCAGCCCCAACCCTATTTCTTTCCACTaGCTCAACTCCTATACTTTC | + |
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Preference number: 4 (lower is better) Translates to: SLGPPYPQARPWPTLSPNPISFH*LNSYTF Trigger: GAAAGTATAGGAGTTGAGTCAGTGGAAAGAAATAGG...GTTGGGGCTGAGAGTAGGCCAAGGCCGGGCCTGAGGATATGGTGGCCCCAGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641846.1 |
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| CDS-3UTR TCA 90 bp | CCACTGTTGATCCCTGGGGCCACCATATCCTCAGGCCCGGCCTTGGCCTACTCTGAGACACCCAGAGAATaGAATGGTCTTTTTCTCACT | + |
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Preference number: 4 (lower is better) Translates to: PLLIPGATISSGPALAYSETPRE*NGLFLT Trigger: AGTGAGAAAAAGACCATTTCATTCTCTGGGTGTCTC...AGAGTAGGCCAAGGCCGGGCCTGAGGATATGGTGGCCCCAGGGATCAACAGTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000641846.1 |
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| CDS-3UTR GCA 90 bp | TGGAAGTCAGTCAGCACTTGCTGCAGCTCCACCACCCCACATAGAAAAGCACTGTCAGTCAGCACTTGCTaGAGCTCCACCACCCCACAT | + |
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Preference number: 4 (lower is better) Translates to: WKSVSTCCSSTTPHRKALSVSTC*SSTTPH Trigger: ATGTGGGGTGGTGGAGCTGCAGCAAGTGCTGACTGA...CAGTGCTTTTCTATGTGGGGTGGTGGAGCTGCAGCAAGTGCTGACTGACTTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000641846.1 |
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| CDS-3UTR TCA 90 bp | ATCCCTGGGGCCACCATATCCTCAGGCCCGGCCTTGGCCTACTCTCAGCCCCAACTTGTAGTTAATATTTaGTCCTCCATTCATGGAAGG | + |
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Preference number: 4 (lower is better) Translates to: IPGATISSGPALAYSQPQLVVNI*SSIHGR Trigger: CCTTCCATGAATGGAGGATCAAATATTAACTACAAG...TTGGGGCTGAGAGTAGGCCAAGGCCGGGCCTGAGGATATGGTGGCCCCAGGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641846.1 |
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| CDS-3UTR CCA 90 bp | GCTCCAGCAGACAGTATGAAGGTCGCTATAACACTGGAAGTCAGTCAGCACTTGGCCACTGTTGATCCCTaGGGCCACCATATCCTCAGG | + |
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Preference number: 4 (lower is better) Translates to: APADSMKVAITLEVSQHLATVDP*GHHILR Trigger: CCTGAGGATATGGTGGCCCCAGGGATCAACAGTGGC...CAAGTGCTGACTGACTTCCAGTGTTATAGCGACCTTCATACTGTCTGCTGGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641846.1 |
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| CDS-3UTR GCA 90 bp | GCTCCAGCAGACAGTATGAAGGTCGCTATAACACTGGAAGTCAGTCAGCACTTGAAGTCAGTCAGCACTTaGTGCAGCTCCACCACCCCA | + |
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Preference number: 4 (lower is better) Translates to: APADSMKVAITLEVSQHLKSVST*CSSTTP Trigger: TGGGGTGGTGGAGCTGCAGCAAGTGCTGACTGACTT...CAAGTGCTGACTGACTTCCAGTGTTATAGCGACCTTCATACTGTCTGCTGGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641846.1 |
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| CDS-3UTR CCA 90 bp | ATGTGTACTTTCCCTAGTCTCTGGTCTCAAGCCAAATGTGGCTCCAGCAGACAGGGAGGGGCCGGCAGATaGCTAAATACCTATCGTAGG | + |
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Preference number: 4 (lower is better) Translates to: MCTFPSLWSQAKCGSSRQGGAGR*LNTYRR Trigger: CCTACGATAGGTATTTAGCCATCTGCCGGCCCCTCC...CTGTCTGCTGGAGCCACATTTGGCTTGAGACCAGAGACTAGGGAAAGTACACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641846.1 |
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| CDS-3UTR CCA 90 bp | TGGAAGTCAGTCAGCACTTGCTGCAGCTCCACCACCCCACATAGAAAAGCACTGTACAAGTATTCCTTCTaGCTGGTTTGCTCCTTTCCT | + |
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Preference number: 4 (lower is better) Translates to: WKSVSTCCSSTTPHRKALYKYSF*LVCSFP Trigger: AGGAAAGGAGCAAACCAGCCAGAAGGAATACTTGTA...CAGTGCTTTTCTATGTGGGGTGGTGGAGCTGCAGCAAGTGCTGACTGACTTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641846.1 |
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| CDS-3UTR TCA 90 bp | GCTCCAGCAGACAGTATGAAGGTCGCTATAACACTGGAAGTCAGTCAGCACTTGTGGTCTTTTTCTCACTaGGCAAGTTTGCCAGCATCT | + |
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Preference number: 4 (lower is better) Translates to: APADSMKVAITLEVSQHLWSFSH*ASLPAS Trigger: AGATGCTGGCAAACTTGCTCAGTGAGAAAAAGACCA...CAAGTGCTGACTGACTTCCAGTGTTATAGCGACCTTCATACTGTCTGCTGGAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000641846.1 |
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| CDS-3UTR TCA 90 bp | AAGGGATGTGTACTTTCCCTAGTCTCTGGTCTCAAGCCAAATGTGGCTCCAGCATGCACTACATCATGTTaGAGGGATGTGTACTTTCCC | + |
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Preference number: 4 (lower is better) Translates to: KGCVLSLVSGLKPNVAPACTTSC*RDVYFP Trigger: GGGAAAGTACACATCCCTTCAACATGATGTAGTGCA...TGCTGGAGCCACATTTGGCTTGAGACCAGAGACTAGGGAAAGTACACATCCCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641846.1 |
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| CDS-3UTR TCA 90 bp | ATGTGTACTTTCCCTAGTCTCTGGTCTCAAGCCAAATGTGGCTCCAGCAGACAGCCAGTCTTCTCCACATaGAATGATTGCAAGTGGTAC | + |
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Preference number: 4 (lower is better) Translates to: MCTFPSLWSQAKCGSSRQPVFST*NDCKWY Trigger: GTACCACTTGCAATCATTTCATGTGGAGAAGACTGG...CTGTCTGCTGGAGCCACATTTGGCTTGAGACCAGAGACTAGGGAAAGTACACAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641846.1 |
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| CDS-3UTR GCA 90 bp | CCAAATGTGGCTCCAGCAGACAGTATGAAGGTCGCTATAACACTGGAAGTCAGTCTCACTGAGCAAGTTTaGCAGCATCTTAGGGATGGT | + |
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Preference number: 4 (lower is better) Translates to: PNVAPADSMKVAITLEVSLTEQV*QHLRDG Trigger: ACCATCCCTAAGATGCTGGCAAACTTGCTCAGTGAG...ACTGACTTCCAGTGTTATAGCGACCTTCATACTGTCTGCTGGAGCCACATTTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641846.1 |
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| CDS-3UTR TCA 90 bp | CCAAATGTGGCTCCAGCAGACAGTATGAAGGTCGCTATAACACTGGAAGTCAGTTCGGAGTCCGAAGTTTaGAGAGAACTTCCTGTATAC | + |
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Preference number: 4 (lower is better) Translates to: PNVAPADSMKVAITLEVSSESEV*RELPVY Trigger: GTATACAGGAAGTTCTCTTCAAACTTCGGACTCCGA...ACTGACTTCCAGTGTTATAGCGACCTTCATACTGTCTGCTGGAGCCACATTTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641846.1 |
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| CDS-3UTR TCA 90 bp | CTTTCCACTGACTCAACTCCTATACTTTCATACATTATACTGGCCATAGATATTGAAGGGTGTGAGCACTaGGTAGACCACTGCCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: LSTDSTPILSYIILAIDIEGCEH*VDHCQG Trigger: GCCCTGGCAGTGGTCTACTCAGTGCTCACACCCTTC...AATATCTATGGCCAGTATAATGTATGAAAGTATAGGAGTTGAGTCAGTGGAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641846.1 |
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| CDS-3UTR TCA 90 bp | ATGTGTACTTTCCCTAGTCTCTGGTCTCAAGCCAAATGTGGCTCCAGCAGACAGGAATGCATGGATGGATaGATACCTTTAAAAGTGTGG | + |
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Preference number: 4 (lower is better) Translates to: MCTFPSLWSQAKCGSSRQECMDG*IPLKVW Trigger: CCACACTTTTAAAGGTATTCATCCATCCATGCATTC...CTGTCTGCTGGAGCCACATTTGGCTTGAGACCAGAGACTAGGGAAAGTACACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641846.1 |
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| CDS-3UTR GCA 90 bp | GCTCCAGCAGACAGTATGAAGGTCGCTATAACACTGGAAGTCAGTCAGCACTTGTTCCTATGTCTCATTTaGAGTATTATACCCAGCCAT | + |
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Preference number: 4 (lower is better) Translates to: APADSMKVAITLEVSQHLFLCLI*SIIPSH Trigger: ATGGCTGGGTATAATACTGCAAATGAGACATAGGAA...CAAGTGCTGACTGACTTCCAGTGTTATAGCGACCTTCATACTGTCTGCTGGAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641846.1 |
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| CDS-3UTR GCA 90 bp | AGTATACTTGTATACTATACAAGTATTCCTTCTGGCTGGTTTGCTCCTTTCCTTAGATGGCCTTCCTCTTaGCGGCAGCTGAGGGAATTC | + |
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Preference number: 4 (lower is better) Translates to: SILVYYTSIPSGWFAPFLRWPSS*RQLREF Trigger: GAATTCCCTCAGCTGCCGGCAAGAGGAAGGCCATCT...AAGGAAAGGAGCAAACCAGCCAGAAGGAATACTTGTATAGTATACAAGTATACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641846.1 |
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| CDS-3UTR GCA 90 bp | CCAAATGTGGCTCCAGCAGACAGTATGAAGGTCGCTATAACACTGGAAGTCAGTACATGTCAGACACTGTaGACTGTGGTTTACAAATCT | + |
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Preference number: 4 (lower is better) Translates to: PNVAPADSMKVAITLEVSTCQTL*TVVYKS Trigger: AGATTTGTAAACCACAGTGCACAGTGTCTGACATGT...ACTGACTTCCAGTGTTATAGCGACCTTCATACTGTCTGCTGGAGCCACATTTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641846.1 |
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| CDS-3UTR CCA 90 bp | CCAAATGTGGCTCCAGCAGACAGTATGAAGGTCGCTATAACACTGGAAGTCAGTAGACACTGTGCACTGTaGTTTACAAATCTTAACGTT | + |
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Preference number: 4 (lower is better) Translates to: PNVAPADSMKVAITLEVSRHCAL*FTNLNV Trigger: AACGTTAAGATTTGTAAACCACAGTGCACAGTGTCT...ACTGACTTCCAGTGTTATAGCGACCTTCATACTGTCTGCTGGAGCCACATTTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641846.1 |
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| CDS-3UTR CCA 90 bp | AAGGGATGTGTACTTTCCCTAGTCTCTGGTCTCAAGCCAAATGTGGCTCCAGCATTTGCTCCTTTCCTTTaGAGAAAATACTTGGAAAGT | + |
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Preference number: 4 (lower is better) Translates to: KGCVLSLVSGLKPNVAPAFAPFL*RKYLES Trigger: ACTTTCCAAGTATTTTCTCCAAAGGAAAGGAGCAAA...TGCTGGAGCCACATTTGGCTTGAGACCAGAGACTAGGGAAAGTACACATCCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641846.1 |
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| CDS-3UTR CCA 90 bp | CCAAATGTGGCTCCAGCAGACAGTATGAAGGTCGCTATAACACTGGAAGTCAGTCCTAAAGGTAGGACCTaGACATATATATGTCTTGTT | + |
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Preference number: 4 (lower is better) Translates to: PNVAPADSMKVAITLEVSPKGRT*TYICLV Trigger: AACAAGACATATATATGTCCAGGTCCTACCTTTAGG...ACTGACTTCCAGTGTTATAGCGACCTTCATACTGTCTGCTGGAGCCACATTTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641846.1 |
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| CDS-3UTR CCA 90 bp | AGTATACTTGTATACTATACAAGTATTCCTTCTGGCTGGTTTGCTCCTTTCCTTGGATCAGCAGGAAGGTaGCTAGGATCTTGCAGGAAT | + |
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Preference number: 4 (lower is better) Translates to: SILVYYTSIPSGWFAPFLGSAGR*LGSCRN Trigger: ATTCCTGCAAGATCCTAGCCACCTTCCTGCTGATCC...AAGGAAAGGAGCAAACCAGCCAGAAGGAATACTTGTATAGTATACAAGTATACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641846.1 |
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| CDS-3UTR GCA 90 bp | AGTATACTTGTATACTATACAAGTATTCCTTCTGGCTGGTTTGCTCCTTTCCTTCTCAGCCCCAACTCATaGCAATATCCCAATTCTCTT | + |
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Preference number: 4 (lower is better) Translates to: SILVYYTSIPSGWFAPFLLSPNS*QYPNSL Trigger: AAGAGAATTGGGATATTGGCATGAGTTGGGGCTGAG...AAGGAAAGGAGCAAACCAGCCAGAAGGAATACTTGTATAGTATACAAGTATACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641846.1 |
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| CDS-3UTR CCA 90 bp | AGTATACTTGTATACTATACAAGTATTCCTTCTGGCTGGTTTGCTCCTTTCCTTAGTATTCCTTCTGGCTaGTTTGCTCCTTTCCTTTGG | + |
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Preference number: 4 (lower is better) Translates to: SILVYYTSIPSGWFAPFLSIPSG*FAPFLW Trigger: CCAAAGGAAAGGAGCAAACCAGCCAGAAGGAATACT...AAGGAAAGGAGCAAACCAGCCAGAAGGAATACTTGTATAGTATACAAGTATACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641846.1 |
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| CDS-3UTR TCA 90 bp | CTTTCCACTGACTCAACTCCTATACTTTCATACATTATACTGGCCATAGATATTACAGAATGGGAGGCGTaGAATCAAGGAAATTTCAAC | + |
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Preference number: 4 (lower is better) Translates to: LSTDSTPILSYIILAIDITEWEA*NQGNFN Trigger: GTTGAAATTTCCTTGATTTCACGCCTCCCATTCTGT...AATATCTATGGCCAGTATAATGTATGAAAGTATAGGAGTTGAGTCAGTGGAAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641846.1 |
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| CDS-3UTR TCA 90 bp | AGTATACTTGTATACTATACAAGTATTCCTTCTGGCTGGTTTGCTCCTTTCCTTCCCAGAGTAATGATGTaGAGTCTTCGCAGAATAAAA | + |
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Preference number: 4 (lower is better) Translates to: SILVYYTSIPSGWFAPFLPRVMM*SLRRIK Trigger: TTTTATTCTGCGAAGACTTCACATCATTACTCTGGG...AAGGAAAGGAGCAAACCAGCCAGAAGGAATACTTGTATAGTATACAAGTATACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641846.1 |
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| CDS-3UTR TCA 90 bp | AGTATACTTGTATACTATACAAGTATTCCTTCTGGCTGGTTTGCTCCTTTCCTTGTCAGAACAGAACTGTaGCAAACTATACTTTTCAAG | + |
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Preference number: 4 (lower is better) Translates to: SILVYYTSIPSGWFAPFLVRTEL*QTILFK Trigger: CTTGAAAAGTATAGTTTGTCACAGTTCTGTTCTGAC...AAGGAAAGGAGCAAACCAGCCAGAAGGAATACTTGTATAGTATACAAGTATACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641846.1 |
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| 3UTR CAA 72 bp | TACTTGTATACTATACAAGTATTCCTTCTGGCTGGTTaGCTCCTTTCCTTTGGAGAAAATACTTGGAAAGTA | + |
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Preference number: 4 (lower is better) Translates to: YLYTIQVFLLAG*LLSFGENTWKV Trigger: TACTTTCCAAGTATTTTCTCCAAAGGAAAGGAGCAAACCAGCCAGAAGGAATACTTGTATAGTATACAAGTA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641846.1 |
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| CDS-3UTR CAA 90 bp | ATCCCTGGGGCCACCATATCCTCAGGCCCGGCCTTGGCCTACTCTCAGCCCCAAGAAGTCAGTCAGCACTaGCTGCAGCTCCACCACCCC | + |
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Preference number: 5 (lower is better) Translates to: IPGATISSGPALAYSQPQEVSQH*LQLHHP Trigger: GGGGTGGTGGAGCTGCAGCAAGTGCTGACTGACTTC...TTGGGGCTGAGAGTAGGCCAAGGCCGGGCCTGAGGATATGGTGGCCCCAGGGAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641846.1 |
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| CDS-3UTR CAA 90 bp | ATCCCTGGGGCCACCATATCCTCAGGCCCGGCCTTGGCCTACTCTCAGCCCCAAGAGATGGCCTTCCTCTaGCCGGCAGCTGAGGGAATT | + |
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Preference number: 5 (lower is better) Translates to: IPGATISSGPALAYSQPQEMAFL*PAAEGI Trigger: AATTCCCTCAGCTGCCGGCAAGAGGAAGGCCATCTC...TTGGGGCTGAGAGTAGGCCAAGGCCGGGCCTGAGGATATGGTGGCCCCAGGGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641846.1 |
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| CDS-3UTR CAA 90 bp | GATCCCTGGGGCCACCATATCCTCAGGCCCGGCCTTGGCCTACTCTCAGCCCCACGGGGCCTGGAGGGGTaGAAGTTTATCACTTTGATG | + |
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Preference number: 5 (lower is better) Translates to: DPWGHHILRPGLGLLSAPRGLEG*KFITLM Trigger: CATCAAAGTGATAAACTTCAACCCCTCCAGGCCCCG...TGGGGCTGAGAGTAGGCCAAGGCCGGGCCTGAGGATATGGTGGCCCCAGGGATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000641846.1 |
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| CDS-3UTR CAA 90 bp | TTGATCCCTGGGGCCACCATATCCTCAGGCCCGGCCTTGGCCTACTCTCAGCCCCTCCTCACAGCCTCCTaGATCTCCTTGTTGCGCAAG | + |
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Preference number: 5 (lower is better) Translates to: LIPGATISSGPALAYSQPLLTAS*ISLLRK Trigger: CTTGCGCAACAAGGAGATCAAGGAGGCTGTGAGGAG...GGGCTGAGAGTAGGCCAAGGCCGGGCCTGAGGATATGGTGGCCCCAGGGATCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641846.1 |
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| CDS-3UTR CAA 90 bp | TCCCTGGGGCCACCATATCCTCAGGCCCGGCCTTGGCCTACTCTCAGCCCCAACTTCCTTCTGGCTGGTTaGCTCCTTTCCTTTGGAGAA | + |
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Preference number: 5 (lower is better) Translates to: SLGPPYPQARPWPTLSPNFLLAG*LLSFGE Trigger: TTCTCCAAAGGAAAGGAGCAAACCAGCCAGAAGGAA...GTTGGGGCTGAGAGTAGGCCAAGGCCGGGCCTGAGGATATGGTGGCCCCAGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641846.1 |
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| CDS-3UTR CAA 90 bp | CTGTTGATCCCTGGGGCCACCATATCCTCAGGCCCGGCCTTGGCCTACTCTCAGCTTCCTATGTCTCATTaGCAGTATTATACCCAGCCA | + |
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Preference number: 5 (lower is better) Translates to: LLIPGATISSGPALAYSQLPMSH*QYYTQP Trigger: TGGCTGGGTATAATACTGCAAATGAGACATAGGAAG...CTGAGAGTAGGCCAAGGCCGGGCCTGAGGATATGGTGGCCCCAGGGATCAACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641846.1 |
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| CDS-3UTR CAA 90 bp | TGGAAGTCAGTCAGCACTTGCTGCAGCTCCACCACCCCACATAGAAAAGCACTGAGTTCCCTGTGTCCATaGCTCACCATTCATGTCCCT | + |
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Preference number: 5 (lower is better) Translates to: WKSVSTCCSSTTPHRKALSSLCP*LTIHVP Trigger: AGGGACATGAATGGTGAGCAATGGACACAGGGAACT...CAGTGCTTTTCTATGTGGGGTGGTGGAGCTGCAGCAAGTGCTGACTGACTTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641846.1 |
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| CDS-3UTR CAA 90 bp | AAGGGATGTGTACTTTCCCTAGTCTCTGGTCTCAAGCCAAATGTGGCTCCAGCACTCGGAGTCCGAAGTTaGAAGAGAACTTCCTGTATA | + |
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Preference number: 5 (lower is better) Translates to: KGCVLSLVSGLKPNVAPALGVRS*KRTSCI Trigger: TATACAGGAAGTTCTCTTCAAACTTCGGACTCCGAG...TGCTGGAGCCACATTTGGCTTGAGACCAGAGACTAGGGAAAGTACACATCCCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641846.1 |
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| CDS-3UTR CAA 90 bp | CTTTCCACTGACTCAACTCCTATACTTTCATACATTATACTGGCCATAGATATTTCCTCAGGCCCGGCCTaGGCCTACTCTCAGCCCCAA | + |
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Preference number: 5 (lower is better) Translates to: LSTDSTPILSYIILAIDISSGPA*AYSQPQ Trigger: TTGGGGCTGAGAGTAGGCCAAGGCCGGGCCTGAGGA...AATATCTATGGCCAGTATAATGTATGAAAGTATAGGAGTTGAGTCAGTGGAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641846.1 |
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| CDS-3UTR CAA 90 bp | ATGTGTACTTTCCCTAGTCTCTGGTCTCAAGCCAAATGTGGCTCCAGCAGACAGCTGCACTACATCATGTaGAAGGGATGTGTACTTTCC | + |
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Preference number: 5 (lower is better) Translates to: MCTFPSLWSQAKCGSSRQLHYIM*KGCVLS Trigger: GGAAAGTACACATCCCTTCAACATGATGTAGTGCAG...CTGTCTGCTGGAGCCACATTTGGCTTGAGACCAGAGACTAGGGAAAGTACACAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641846.1 |
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| CDS CAA 72 bp | TTGATCCCTGGGGCCACCATATCCTCAGGCCCGGCCTaGGCCTACTCTCAGCCCCAACTCATGCCAATATCC | + |
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Preference number: 6 (lower is better) Translates to: LIPGATISSGPA*AYSQPQLMPIS Trigger: GGATATTGGCATGAGTTGGGGCTGAGAGTAGGCCAAGGCCGGGCCTGAGGATATGGTGGCCCCAGGGATCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641846.1 |
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| CDS TCA 72 bp | CTAGAGATTGTTGGTGGGGAGTGCTCTGCTAGAGCTTaGCTCTGGAAGCCCAGCCACTGCTCGGAGTCCGAA | + |
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Preference number: 6 (lower is better) Translates to: LEIVGGECSARA*LWKPSHCSESE Trigger: TTCGGACTCCGAGCAGTGGCTGGGCTTCCAGAGTCAAGCTCTAGCAGAGCACTCCCCACCAACAATCTCTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000641189.1 ENST00000641846.1 |
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| CDS GCA 72 bp | GAATTCTGCTACCTGGCTCCAGTTCCCTGTGTCCATTaGTCACCATTCATGTCCCTAGAGATTGTTGGTGGG | + |
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Preference number: 6 (lower is better) Translates to: EFCYLAPVPCVH*SPFMSLEIVGG Trigger: CCCACCAACAATCTCTAGGGACATGAATGGTGAGCAATGGACACAGGGAACTGGAGCCAGGTAGCAGAATTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641846.1 |
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| CDS TCA 72 bp | GTAAGCAGCCACTGCACTTCAACCGGAGCAATAGAGTaGGATTCTGTCTCTAGAGATTGTTGGTGGGGAGTG | + |
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Preference number: 6 (lower is better) Translates to: VSSHCTSTGAIE*DSVSRDCWWGV Trigger: CACTCCCCACCAACAATCTCTAGAGACAGAATCTCACTCTATTGCTCCGGTTGAAGTGCAGTGGCTGCTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641189.1 |
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| CDS CAA 90 bp | GTCCGAAGTTTGAAGAGAACTTCCTGTATACTTCCTATGTCTCATTaGCAGTATTATACCCAGCCATTCCCGGGGCCTGGAGGGGTTGAA | + |
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Preference number: 6 (lower is better) Translates to: VRSLKRTSCILPMSH*QYYTQPFPGPGGVE Trigger: TTCAACCCCTCCAGGCCCCGGGAATGGCTGGGTATAATACTGCAAATGAGACATAGGAAGTATACAGGAAGTTCTCTTCAAACTTCGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000641189.1 ENST00000641846.1 |
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| CDS CAA 72 bp | TTGAAGAGAACTTCCTGTATACTTCCTATGTCTCATTaGCAGTATTATACCCAGCCATTCCCGGGGCCTGGA | + |
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Preference number: 6 (lower is better) Translates to: LKRTSCILPMSH*QYYTQPFPGPG Trigger: TCCAGGCCCCGGGAATGGCTGGGTATAATACTGCAAATGAGACATAGGAAGTATACAGGAAGTTCTCTTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000641189.1 ENST00000641846.1 |
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