Pregenerated sensors for OR6J1 (Homo sapiens)
Ensembl gene IDs: ENSG00000255804Ensembl transcript IDs: ENST00000540461.2
Found 165 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CATTCTTCTGCCATGGCTTCAGCCGGTCCCTCCGTTTGGGGTGCCTaGCTTCCCGCAACACTAGTTAGCTCACCTCCAGCTTCCCCATGC | + |
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Preference number: 1 (lower is better) Translates to: HSSAMASAGPSVWGA*LPATLVSSPPASPC Trigger: GCATGGGGAAGCTGGAGGTGAGCTAACTAGTGTTGCGGGAAGTCAGGCACCCCAAACGGAGGGACCGGCTGAAGCCATGGCAGAAGAATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| 3UTR GCA 90 bp | GGCCAGTCTCTTAGGTGTGCAAGTGTCCCTGCAGGTGATGGGTTATaGCTTCAGTCAGATTATCCATCCATGGATCAATCATTAGTGGCT | + |
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Preference number: 1 (lower is better) Translates to: GQSLRCASVPAGDGL*LQSDYPSMDQSLVA Trigger: AGCCACTAATGATTGATCCATGGATGGATAATCTGACTGAAGGCATAACCCATCACCTGCAGGGACACTTGCACACCTAAGAGACTGGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| 3UTR CCA 90 bp | GAGGAAATAGGCTGCATGGCCCTTCCATTCTTACAATATTCAGTGTaGATGGGGCTTAGAGATCATCAAGTCCAGCCCTGTTGCACTTCA | + |
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Preference number: 1 (lower is better) Translates to: EEIGCMALPFLQYSV*MGLRDHQVQPCCTS Trigger: TGAAGTGCAACAGGGCTGGACTTGATGATCTCTAAGCCCCATCCACACTGAATATTGTAAGAATGGAAGGGCCATGCAGCCTATTTCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| 3UTR CCA 90 bp | ACCACAGGCCCAGAGTGGGTCCAAGTAAGCATCCCAGACAGTGTTTaGGCACCAAGAATTCAGACTAGGAATGCAGTTAAAAACAGATTC | + |
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Preference number: 1 (lower is better) Translates to: TTGPEWVQVSIPDSV*APRIQTRNAVKNRF Trigger: GAATCTGTTTTTAACTGCATTCCTAGTCTGAATTCTTGGTGCCCAAACACTGTCTGGGATGCTTACTTGGACCCACTCTGGGCCTGTGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| 3UTR TCA 90 bp | TCTCTCTCTTCTCTGTTTTTCTCTATACATCAACTGCATTCTCTCTaGGGGGCAGACTGGTTTCCTCTAATTATTCATCAGCTTGCACCT | + |
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Preference number: 1 (lower is better) Translates to: SLSSLFFSIHQLHSL*GADWFPLIIHQLAP Trigger: AGGTGCAAGCTGATGAATAATTAGAGGAAACCAGTCTGCCCCTCAGAGAGAATGCAGTTGATGTATAGAGAAAAACAGAGAAGAGAGAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| 3UTR-3UTR TCA 90 bp | CAAGGCAAAGGGAGGCATGGCGAGATCACAGGACCACAGGACCAGGGTGAAATTAAAGCTGGTTTGCACTaGGCTGAACCACAGGCCCAG | + |
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Preference number: 2 (lower is better) Translates to: QGKGRHGEITGPQDQGEIKAGLH*AEPQAQ Trigger: CTGGGCCTGTGGTTCAGCTCAGTGCAAACCAGCTTT...AATTTCACCCTGGTCCTGTGGTCCTGTGATCTCGCCATGCCTCCCTTTGCCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| 3UTR-3UTR TCA 90 bp | GGGAGCGCTATGGGAGACTGGGGTCTATTTGACCCCTACAGTCTACAGACCATATCCCCTGCCTGCCTTTaGCTCTCTGCCAAATGCAAG | + |
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Preference number: 2 (lower is better) Translates to: GSAMGDWGLFDPYSLQTISPACL*LSAKCK Trigger: CTTGCATTTGGCAGAGAGTCAAAGGCAGGCAGGGGA...TATGGTCTGTAGACTGTAGGGGTCAAATAGACCCCAGTCTCCCATAGCGCTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| 3UTR-3UTR GCA 90 bp | AAGGCAAAGGGAGGCATGGCGAGATCACAGGACCACAGGACCAGGGTGAAATTACCTCCAGCTTCCCCATaGCAAAATCCTCCAGTCAGG | + |
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Preference number: 2 (lower is better) Translates to: KAKGGMARSQDHRTRVKLPPASP*QNPPVR Trigger: CCTGACTGGAGGATTTTGGCATGGGGAAGCTGGAGG...TAATTTCACCCTGGTCCTGTGGTCCTGTGATCTCGCCATGCCTCCCTTTGCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| 3UTR-3UTR CCA 90 bp | AAGGCAAAGGGAGGCATGGCGAGATCACAGGACCACAGGACCAGGGTGAAATTAACCACAGGCCCAGAGTaGGTCCAAGTAAGCATCCCA | + |
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Preference number: 2 (lower is better) Translates to: KAKGGMARSQDHRTRVKLTTGPE*VQVSIP Trigger: TGGGATGCTTACTTGGACCCACTCTGGGCCTGTGGT...TAATTTCACCCTGGTCCTGTGGTCCTGTGATCTCGCCATGCCTCCCTTTGCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| 3UTR-3UTR GCA 90 bp | TTCCTAATAAGCCTGGGAGCGCTATGGGAGACTGGGGTCTATTTGACCCCTACAAGCTTTCCACTCCCCTaGCTGCCTTTGACTCTCTGC | + |
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Preference number: 2 (lower is better) Translates to: FLISLGALWETGVYLTPTSFPLP*LPLTLC Trigger: GCAGAGAGTCAAAGGCAGGCAGGGGAGTGGAAAGCT...TGTAGGGGTCAAATAGACCCCAGTCTCCCATAGCGCTCCCAGGCTTATTAGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| 3UTR-3UTR CCA 90 bp | CAAAGTGGCCACTCCAGCCACCAAGCCTATTTCTGCTTCCAGGGGAAGCATCACAGATCCTGCAGAGGATaGAAAGAAAGAGGGTCCGTG | + |
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Preference number: 2 (lower is better) Translates to: QSGHSSHQAYFCFQGKHHRSCRG*KERGSV Trigger: CACGGACCCTCTTTCTTTCCATCCTCTGCAGGATCT...GTGATGCTTCCCCTGGAAGCAGAAATAGGCTTGGTGGCTGGAGTGGCCACTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| 3UTR-3UTR TCA 90 bp | GGGAGCGCTATGGGAGACTGGGGTCTATTTGACCCCTACAGTCTACAGACCATATGTGCCTTTGTGTTGTaGGTGGGCTGTCATCTCTCT | + |
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Preference number: 2 (lower is better) Translates to: GSAMGDWGLFDPYSLQTICAFVL*VGCHLS Trigger: AGAGAGATGACAGCCCACTCACAACACAAAGGCACA...TATGGTCTGTAGACTGTAGGGGTCAAATAGACCCCAGTCTCCCATAGCGCTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| 3UTR-3UTR GCA 90 bp | GGGAGCGCTATGGGAGACTGGGGTCTATTTGACCCCTACAGTCTACAGACCATACAAGTCCAGCCCTGTTaGACTTCAGCTGAGAGTACT | + |
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Preference number: 2 (lower is better) Translates to: GSAMGDWGLFDPYSLQTIQVQPC*TSAEST Trigger: AGTACTCTCAGCTGAAGTGCAACAGGGCTGGACTTG...TATGGTCTGTAGACTGTAGGGGTCAAATAGACCCCAGTCTCCCATAGCGCTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| 3UTR-3UTR GCA 90 bp | TTCCTAATAAGCCTGGGAGCGCTATGGGAGACTGGGGTCTATTTGACCCCTACACTATCCACATTCTTCTaGCATGGCTTCAGCCGGTCC | + |
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Preference number: 2 (lower is better) Translates to: FLISLGALWETGVYLTPTLSTFF*HGFSRS Trigger: GGACCGGCTGAAGCCATGGCAGAAGAATGTGGATAG...TGTAGGGGTCAAATAGACCCCAGTCTCCCATAGCGCTCCCAGGCTTATTAGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| 3UTR-3UTR GCA 90 bp | GGGAGCGCTATGGGAGACTGGGGTCTATTTGACCCCTACAGTCTACAGACCATACTGCCTTTGACTCTCTaGCAAATGCAAGTGATGGTG | + |
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Preference number: 2 (lower is better) Translates to: GSAMGDWGLFDPYSLQTILPLTL*QMQVMV Trigger: CACCATCACTTGCATTTGGCAGAGAGTCAAAGGCAG...TATGGTCTGTAGACTGTAGGGGTCAAATAGACCCCAGTCTCCCATAGCGCTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| 3UTR-3UTR TCA 90 bp | CCTGCAGAGGATGGAAAGAAAGAGGGTCCGTGCAGAGAAGTTCAGGAAGGACTTGGTCACAGATTAAAGTaGAAACCAAGGCCAGCGTTC | + |
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Preference number: 2 (lower is better) Translates to: PAEDGKKEGPCREVQEGLGHRLK*KPRPAF Trigger: GAACGCTGGCCTTGGTTTTCACTTTAATCTGTGACC...AAGTCCTTCCTGAACTTCTCTGCACGGACCCTCTTTCTTTCCATCCTCTGCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| 3UTR-3UTR CCA 90 bp | TCTTTCCCAGGGATGTTCCTTGCTGAGAAAAAGAATTCAGTGATATTCCTCCCAACCTGGCACCCAAAGTaGCCACTCCAGCCACCAAGC | + |
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Preference number: 2 (lower is better) Translates to: SFPGMFLAEKKNSVIFLPTWHPK*PLQPPS Trigger: GCTTGGTGGCTGGAGTGGCCACTTTGGGTGCCAGGT...TGGGAGGAATATCACTGAATTCTTTTTCTCAGCAAGGAACATCCCTGGGAAAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| 3UTR-3UTR TCA 90 bp | TCTTTCCCAGGGATGTTCCTTGCTGAGAAAAAGAATTCAGTGATATTCCTCCCAATGCATGTGTCCTTCTaGCCAGTTCCACGCAGAGCA | + |
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Preference number: 2 (lower is better) Translates to: SFPGMFLAEKKNSVIFLPMHVSF*PVPRRA Trigger: TGCTCTGCGTGGAACTGGTCAGAAGGACACATGCAT...TGGGAGGAATATCACTGAATTCTTTTTCTCAGCAAGGAACATCCCTGGGAAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| 3UTR-3UTR GCA 90 bp | TGTTCAAACACACATGCTCTACAATTTGTGCAGTTAACACAATTATCACATGGTTCCCTCCGTTTGGGGTaGCTGACTTCCCGCAACACT | + |
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Preference number: 2 (lower is better) Translates to: CSNTHALQFVQLTQLSHGSLRLG*LTSRNT Trigger: AGTGTTGCGGGAAGTCAGGCACCCCAAACGGAGGGA...ACCATGTGATAATTGTGTTAACTGCACAAATTGTAGAGCATGTGTGTTTGAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| 3UTR-3UTR GCA 90 bp | TCTTTCCCAGGGATGTTCCTTGCTGAGAAAAAGAATTCAGTGATATTCCTCCCAGCAGGTGATGGGTTATaGCTTCAGTCAGATTATCCA | + |
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Preference number: 2 (lower is better) Translates to: SFPGMFLAEKKNSVIFLPAGDGL*LQSDYP Trigger: TGGATAATCTGACTGAAGGCATAACCCATCACCTGC...TGGGAGGAATATCACTGAATTCTTTTTCTCAGCAAGGAACATCCCTGGGAAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| 3UTR-3UTR TCA 90 bp | CAAGATAGCTCAATAAAAAGGGATTTCATTTACAGGTACAGGCAAAACACATCAAAGTGTCCCTGCAGGTaGTGGGTTATGCCTTCAGTC | + |
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Preference number: 2 (lower is better) Translates to: QDSSIKRDFIYRYRQNTSKCPCR*WVMPSV Trigger: GACTGAAGGCATAACCCATCACCTGCAGGGACACTT...TGATGTGTTTTGCCTGTACCTGTAAATGAAATCCCTTTTTATTGAGCTATCTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| 3UTR-3UTR CCA 90 bp | CTCTTCTCTGTTTTTCTCTATACATCAACTGCATTCTCTCTGAGGGGCAGACTGTTACAATATTCAGTGTaGATGGGGCTTAGAGATCAT | + |
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Preference number: 2 (lower is better) Translates to: LFSVFLYTSTAFSLRGRLLQYSV*MGLRDH Trigger: ATGATCTCTAAGCCCCATCCACACTGAATATTGTAA...CAGTCTGCCCCTCAGAGAGAATGCAGTTGATGTATAGAGAAAAACAGAGAAGAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| 3UTR-3UTR CCA 90 bp | TGGAGAGATAATGAACTTTGTAGTCAAGCTGCTTTTTGGTCACAAGAATCTAAGCCTTTGTGTTGTGAGTaGGCTGTCATCTCTCTCTTC | + |
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Preference number: 2 (lower is better) Translates to: WRDNELCSQAAFWSQESKPLCCE*AVISLF Trigger: GAAGAGAGAGATGACAGCCCACTCACAACACAAAGG...CTTAGATTCTTGTGACCAAAAAGCAGCTTGACTACAAAGTTCATTATCTCTCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| 3UTR-3UTR GCA 90 bp | GATAATGAACTTTGTAGTCAAGCTGCTTTTTGGTCACAAGAATCTAAGACCTTCATAACACAGATGACATaGACCCAACACAATCATTGC | + |
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Preference number: 2 (lower is better) Translates to: DNELCSQAAFWSQESKTFITQMT*TQHNHC Trigger: GCAATGATTGTGTTGGGTGCATGTCATCTGTGTTAT...GAAGGTCTTAGATTCTTGTGACCAAAAAGCAGCTTGACTACAAAGTTCATTATC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| 3UTR-3UTR GCA 90 bp | GATAATGAACTTTGTAGTCAAGCTGCTTTTTGGTCACAAGAATCTAAGACCTTCTTTCTAAAAAGATCCTaGAGAGGATGGAAAGAAAGA | + |
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Preference number: 2 (lower is better) Translates to: DNELCSQAAFWSQESKTFFLKRS*RGWKER Trigger: TCTTTCTTTCCATCCTCTGCAGGATCTTTTTAGAAA...GAAGGTCTTAGATTCTTGTGACCAAAAAGCAGCTTGACTACAAAGTTCATTATC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| 3UTR GCA 72 bp | CCCGCAACACTAGTTAGCTCACCTCCAGCTTCCCCATaGCAAAATCCTCCAGTCAGGGAATACTCGGGCCTT | + |
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Preference number: 3 (lower is better) Translates to: PATLVSSPPASP*QNPPVREYSGL Trigger: AAGGCCCGAGTATTCCCTGACTGGAGGATTTTGGCATGGGGAAGCTGGAGGTGAGCTAACTAGTGTTGCGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| 3UTR GCA 72 bp | AGGGGCAGACTGGTTTCCTCTAATTATTCATCAGCTTaGACCTGGCACCCAAAGTGGCCACTCCAGCCACCA | + |
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Preference number: 3 (lower is better) Translates to: RGRLVSSNYSSA*TWHPKWPLQPP Trigger: TGGTGGCTGGAGTGGCCACTTTGGGTGCCAGGTGCAAGCTGATGAATAATTAGAGGAAACCAGTCTGCCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| 3UTR-3UTR CAA 90 bp | AAGGCAAAGGGAGGCATGGCGAGATCACAGGACCACAGGACCAGGGTGAAATTATCAGGAGACAGGGTTTaGAGAGCAACCAGTCTGACC | + |
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Preference number: 3 (lower is better) Translates to: KAKGGMARSQDHRTRVKLSGDRV*RATSLT Trigger: GGTCAGACTGGTTGCTCTCAAAACCCTGTCTCCTGA...TAATTTCACCCTGGTCCTGTGGTCCTGTGATCTCGCCATGCCTCCCTTTGCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| 3UTR-3UTR CAA 90 bp | ACATCTTCCTCAGCTGACAGGATTAAGAGATTAAAGACAGGCATAGGAAATCACAGCCGGTCCCTCCGTTaGGGGTGCCTGACTTCCCGC | + |
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Preference number: 3 (lower is better) Translates to: TSSSADRIKRLKTGIGNHSRSLR*GCLTSR Trigger: GCGGGAAGTCAGGCACCCCAAACGGAGGGACCGGCT...GTGATTTCCTATGCCTGTCTTTAATCTCTTAATCCTGTCAGCTGAGGAAGATGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| 3UTR-3UTR CAA 90 bp | AGGCCCAGAGTGGGTCCAAGTAAGCATCCCAGACAGTGTTTGGGCACCAAGAATGGGGAAGCATCACACTaGTGTGGAATAATCTCTGTG | + |
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Preference number: 3 (lower is better) Translates to: RPRVGPSKHPRQCLGTKNGEASH*CGIISV Trigger: CACAGAGATTATTCCACACAAGTGTGATGCTTCCCC...ATTCTTGGTGCCCAAACACTGTCTGGGATGCTTACTTGGACCCACTCTGGGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| 3UTR GCA 72 bp | TGGATGGGGCTTAGAGATCATCAAGTCCAGCCCTGTTaGACTTCAGCTGAGAGTACTGAGAGTCAGAATGGC | + |
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Preference number: 3 (lower is better) Translates to: WMGLRDHQVQPC*TSAESTESQNG Trigger: GCCATTCTGACTCTCAGTACTCTCAGCTGAAGTGCAACAGGGCTGGACTTGATGATCTCTAAGCCCCATCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| 3UTR CCA 72 bp | GGCTGCATGGCCCTTCCATTCTTACAATATTCAGTGTaGATGGGGCTTAGAGATCATCAAGTCCAGCCCTGT | + |
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Preference number: 3 (lower is better) Translates to: GCMALPFLQYSV*MGLRDHQVQPC Trigger: ACAGGGCTGGACTTGATGATCTCTAAGCCCCATCCACACTGAATATTGTAAGAATGGAAGGGCCATGCAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| 3UTR CCA 72 bp | TCTAATTATTCATCAGCTTGCACCTGGCACCCAAAGTaGCCACTCCAGCCACCAAGCCTATTTCTGCTTCCA | + |
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Preference number: 3 (lower is better) Translates to: SNYSSACTWHPK*PLQPPSLFLLP Trigger: TGGAAGCAGAAATAGGCTTGGTGGCTGGAGTGGCCACTTTGGGTGCCAGGTGCAAGCTGATGAATAATTAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| 3UTR-3UTR CAA 90 bp | TTCCTAATAAGCCTGGGAGCGCTATGGGAGACTGGGGTCTATTTGACCCCTACAAAGCCGATAGAACAGTaGTGTTCGGGATCCATAAAG | + |
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Preference number: 3 (lower is better) Translates to: FLISLGALWETGVYLTPTKPIEQ*CSGSIK Trigger: CTTTATGGATCCCGAACACAACTGTTCTATCGGCTT...TGTAGGGGTCAAATAGACCCCAGTCTCCCATAGCGCTCCCAGGCTTATTAGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| 3UTR-3UTR CAA 90 bp | GGGAGCGCTATGGGAGACTGGGGTCTATTTGACCCCTACAGTCTACAGACCATAGCCCAGATTTCGTATTaGTTCAAACACACATGCTCT | + |
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Preference number: 3 (lower is better) Translates to: GSAMGDWGLFDPYSLQTIAQISY*FKHTCS Trigger: AGAGCATGTGTGTTTGAACAAATACGAAATCTGGGC...TATGGTCTGTAGACTGTAGGGGTCAAATAGACCCCAGTCTCCCATAGCGCTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| 3UTR GCA 72 bp | CTAGGAAGTCATGAGAGAAGAGGGCTCTTTGTGTTGTaGCTTTGTGTTGTGAGTGGGCTGTCATCTCTCTCT | + |
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Preference number: 3 (lower is better) Translates to: LGSHERRGLFVL*LCVVSGLSSLS Trigger: AGAGAGAGATGACAGCCCACTCACAACACAAAGGCACAACACAAAGAGCCCTCTTCTCTCATGACTTCCTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| 3UTR GCA 72 bp | AACCTCAGAGATTCTGATGATATTGAAAAGCTGGTTTaGACTGAGCTGAACCACAGGCCCAGAGTGGGTCCA | + |
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Preference number: 3 (lower is better) Translates to: NLRDSDDIEKLV*TELNHRPRVGP Trigger: TGGACCCACTCTGGGCCTGTGGTTCAGCTCAGTGCAAACCAGCTTTTCAATATCATCAGAATCTCTGAGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| 3UTR CCA 72 bp | GCATGGCCCTTCCATTCTTACAATATTCAGTGTGGATaGGGCTTAGAGATCATCAAGTCCAGCCCTGTTGCA | + |
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Preference number: 3 (lower is better) Translates to: AWPFHSYNIQCG*GLEIIKSSPVA Trigger: TGCAACAGGGCTGGACTTGATGATCTCTAAGCCCCATCCACACTGAATATTGTAAGAATGGAAGGGCCATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| 3UTR TCA 72 bp | CAGGCGCGTACTCTCTTTCCCAGGGATGTTCCTTGCTaGGAAAAAGAATTCAGTGATATTCCTCCCATTTGC | + |
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Preference number: 3 (lower is better) Translates to: QARTLFPRDVPC*EKEFSDIPPIC Trigger: GCAAATGGGAGGAATATCACTGAATTCTTTTTCTCAGCAAGGAACATCCCTGGGAAAGAGAGTACGCGCCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| 3UTR GCA 72 bp | CTTAGGTGTGCAAGTGTCCCTGCAGGTGATGGGTTATaGCTTCAGTCAGATTATCCATCCATGGATCAATCA | + |
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Preference number: 3 (lower is better) Translates to: LRCASVPAGDGL*LQSDYPSMDQS Trigger: TGATTGATCCATGGATGGATAATCTGACTGAAGGCATAACCCATCACCTGCAGGGACACTTGCACACCTAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| 3UTR TCA 72 bp | AATCAAAATTCTACCAGCTCCAGCCCTAGGAAGTCATaGGAGAAGAGGGCTCTTTGTGTTGTGCCTTTGTGT | + |
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Preference number: 3 (lower is better) Translates to: NQNSTSSSPRKS*EKRALCVVPLC Trigger: ACACAAAGGCACAACACAAAGAGCCCTCTTCTCTCATGACTTCCTAGGGCTGGAGCTGGTAGAATTTTGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| 3UTR-3UTR CAA 90 bp | ACATCTTCCTCAGCTGACAGGATTAAGAGATTAAAGACAGGCATAGGAAATCACCATCCCAGACAGTGTTaGGGCACCAAGAATTCAGAC | + |
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Preference number: 3 (lower is better) Translates to: TSSSADRIKRLKTGIGNHHPRQC*GTKNSD Trigger: GTCTGAATTCTTGGTGCCCAAACACTGTCTGGGATG...GTGATTTCCTATGCCTGTCTTTAATCTCTTAATCCTGTCAGCTGAGGAAGATGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| 3UTR TCA 72 bp | CACAAGGGTATTCATTGGGGAAGTGATAAGTGTCCATaGAATCTTCACTATCCACATTCTTCTGCCATGGCT | + |
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Preference number: 3 (lower is better) Translates to: HKGIHWGSDKCP*NLHYPHSSAMA Trigger: AGCCATGGCAGAAGAATGTGGATAGTGAAGATTTCATGGACACTTATCACTTCCCCAATGAATACCCTTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| 3UTR-3UTR CAA 90 bp | ACATCTTCCTCAGCTGACAGGATTAAGAGATTAAAGACAGGCATAGGAAATCACGGGAGAAGCTATGCCTaGTGGAGAGATAATGAACTT | + |
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Preference number: 3 (lower is better) Translates to: TSSSADRIKRLKTGIGNHGRSYA*WRDNEL Trigger: AAGTTCATTATCTCTCCACAAGGCATAGCTTCTCCC...GTGATTTCCTATGCCTGTCTTTAATCTCTTAATCCTGTCAGCTGAGGAAGATGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| 3UTR GCA 72 bp | CTGAACAATTGCTGTTATCCTGTTCTTTTTCCAAGGTaGCCAGATTTCGTATTTGTTCAAACACACATGCTC | + |
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Preference number: 3 (lower is better) Translates to: LNNCCYPVLFPR*PDFVFVQTHML Trigger: GAGCATGTGTGTTTGAACAAATACGAAATCTGGGCACCTTGGAAAAAGAACAGGATAACAGCAATTGTTCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS-3UTR GCA 90 bp | TCATCAGCTTGCACCTGGCACCCAAAGTGGCCACTCCAGCCACCAAGCCTATTTGCTAGGGTTGCCTTATaGCACCTCCACGGCTCAGTC | + |
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Preference number: 4 (lower is better) Translates to: SSACTWHPKWPLQPPSLFARVAL*HLHGSV Trigger: GACTGAGCCGTGGAGGTGGCATAAGGCAACCCTAGC...AAATAGGCTTGGTGGCTGGAGTGGCCACTTTGGGTGCCAGGTGCAAGCTGATGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS-3UTR CCA 90 bp | GGCCACTCCAGCCACCAAGCCTATTTCTGCTTCCAGGGGAAGCATCACACTTGTTACCCATGGGCCTGGTaGGCCTGGCTCAATTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: GHSSHQAYFCFQGKHHTCYPWAW*AWLNSP Trigger: AGGAGAATTGAGCCAGGCCCACCAGGCCCATGGGTA...ACAAGTGTGATGCTTCCCCTGGAAGCAGAAATAGGCTTGGTGGCTGGAGTGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS-3UTR CCA 90 bp | CCTCTGGTCCAGCCAAGCCACACAGGTCATAGGTCACTGGCCAGTCTCTTAGGTAGTTACCCATGGGCCTaGTGGGCCTGGCTCAATTCT | + |
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Preference number: 4 (lower is better) Translates to: PLVQPSHTGHRSLASLLGSYPWA*WAWLNS Trigger: AGAATTGAGCCAGGCCCACCAGGCCCATGGGTAACT...ACCTAAGAGACTGGCCAGTGACCTATGACCTGTGTGGCTTGGCTGGACCAGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS-3UTR GCA 90 bp | CCTCTGGTCCAGCCAAGCCACACAGGTCATAGGTCACTGGCCAGTCTCTTAGGTAAACTCAGTCACCGCTaGAGTCCAGTTACCCATGGG | + |
|
Preference number: 4 (lower is better) Translates to: PLVQPSHTGHRSLASLLGKLSHR*SPVTHG Trigger: CCCATGGGTAACTGGACTGCAGCGGTGACTGAGTTT...ACCTAAGAGACTGGCCAGTGACCTATGACCTGTGTGGCTTGGCTGGACCAGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS-3UTR CCA 90 bp | CCTGCAGAGGATGGAAAGAAAGAGGGTCCGTGCAGAGAAGTTCAGGAAGGACTTACCTGGCACCCAAAGTaGCCACTCCAGCCACCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: PAEDGKKEGPCREVQEGLTWHPK*PLQPPS Trigger: GCTTGGTGGCTGGAGTGGCCACTTTGGGTGCCAGGT...AAGTCCTTCCTGAACTTCTCTGCACGGACCCTCTTTCTTTCCATCCTCTGCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS-3UTR CCA 90 bp | CAAGGCAAAGGGAGGCATGGCGAGATCACAGGACCACAGGACCAGGGTGAAATTACCACAGGCCCAGAGTaGGTCCAAGTAAGCATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: QGKGRHGEITGPQDQGEITTGPE*VQVSIP Trigger: TGGGATGCTTACTTGGACCCACTCTGGGCCTGTGGT...AATTTCACCCTGGTCCTGTGGTCCTGTGATCTCGCCATGCCTCCCTTTGCCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS-3UTR TCA 90 bp | AAGGCAAAGGGAGGCATGGCGAGATCACAGGACCACAGGACCAGGGTGAAATTAAGACAGAAGGTCTCATaGTGGTGGTGTACCGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: KAKGGMARSQDHRTRVKLRQKVS*WWCTAG Trigger: CCCTGCGGTACACCACCATCATGAGACCTTCTGTCT...TAATTTCACCCTGGTCCTGTGGTCCTGTGATCTCGCCATGCCTCCCTTTGCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS-3UTR GCA 90 bp | GGAATCAAAATTCTACCAGCTCCAGCCCTAGGAAGTCATGAGAGAAGAGGGCTCGATGGCAGTGGTGTCTaGACAGGCCAGGGCCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: GIKILPAPALGSHERRGLDGSGV*TGQGQQ Trigger: TTGCTGGCCCTGGCCTGTGCAGACACCACTGCCATC...GAGCCCTCTTCTCTCATGACTTCCTAGGGCTGGAGCTGGTAGAATTTTGATTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS-3UTR CCA 90 bp | GGCCACTCCAGCCACCAAGCCTATTTCTGCTTCCAGGGGAAGCATCACACTTGTCTCAGTCTGTTCACCTaGGATTTGCTGCCACCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: GHSSHQAYFCFQGKHHTCLSLFT*DLLPPR Trigger: CCTAGGTGGCAGCAAATCCCAGGTGAACAGACTGAG...ACAAGTGTGATGCTTCCCCTGGAAGCAGAAATAGGCTTGGTGGCTGGAGTGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS-3UTR CCA 90 bp | CCTCTGGTCCAGCCAAGCCACACAGGTCATAGGTCACTGGCCAGTCTCTTAGGTGAGCAAGCCCTTCCTTaGTGGTCTTTGTTGGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: PLVQPSHTGHRSLASLLGEQALP*WSLLED Trigger: ATCCTCCAACAAAGACCACCAAGGAAGGGCTTGCTC...ACCTAAGAGACTGGCCAGTGACCTATGACCTGTGTGGCTTGGCTGGACCAGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS-3UTR CCA 90 bp | GGCACCCAAAGTGGCCACTCCAGCCACCAAGCCTATTTCTGCTTCCAGGGGAAGGTTAATTTAGCAAAGTaGATGCTGCAGCACTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: GTQSGHSSHQAYFCFQGKVNLAK*MLQHWR Trigger: CCGCCAGTGCTGCAGCATCCACTTTGCTAAATTAAC...CTTCCCCTGGAAGCAGAAATAGGCTTGGTGGCTGGAGTGGCCACTTTGGGTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS-3UTR GCA 90 bp | CCTGCAGAGGATGGAAAGAAAGAGGGTCCGTGCAGAGAAGTTCAGGAAGGACTTCCTCCAGCTTCCCCATaGCAAAATCCTCCAGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PAEDGKKEGPCREVQEGLPPASP*QNPPVR Trigger: CCTGACTGGAGGATTTTGGCATGGGGAAGCTGGAGG...AAGTCCTTCCTGAACTTCTCTGCACGGACCCTCTTTCTTTCCATCCTCTGCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS-3UTR GCA 90 bp | GGGAGCGCTATGGGAGACTGGGGTCTATTTGACCCCTACAGTCTACAGACCATACTATCCACATTCTTCTaGCATGGCTTCAGCCGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GSAMGDWGLFDPYSLQTILSTFF*HGFSRS Trigger: GGACCGGCTGAAGCCATGGCAGAAGAATGTGGATAG...TATGGTCTGTAGACTGTAGGGGTCAAATAGACCCCAGTCTCCCATAGCGCTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS-3UTR CCA 90 bp | AAAAGATCCTGCAGAGGATGGAAAGAAAGAGGGTCCGTGCAGAGAAGTTCAGGAGAGTCAGCAGGAACGTaGGCAGCAGGAGCACCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: KRSCRGWKERGSVQRSSGESAGT*AAGAPG Trigger: TCCTGGTGCTCCTGCTGCCCACGTTCCTGCTGACTC...TCCTGAACTTCTCTGCACGGACCCTCTTTCTTTCCATCCTCTGCAGGATCTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS-3UTR TCA 90 bp | GGCAGACTGGTTTCCTCTAATTATTCATCAGCTTGCACCTGGCACCCAAAGTGGAAAGCTGGTTTGCACTaGGCTGAACCACAGGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GRLVSSNYSSACTWHPKWKAGLH*AEPQAQ Trigger: CTGGGCCTGTGGTTCAGCTCAGTGCAAACCAGCTTT...CCACTTTGGGTGCCAGGTGCAAGCTGATGAATAATTAGAGGAAACCAGTCTGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS-3UTR GCA 90 bp | AAGGCAAAGGGAGGCATGGCGAGATCACAGGACCACAGGACCAGGGTGAAATTAGGGCTCTTTGTGTTGTaGCTTTGTGTTGTGAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: KAKGGMARSQDHRTRVKLGLFVL*LCVVSG Trigger: CCCACTCACAACACAAAGGCACAACACAAAGAGCCC...TAATTTCACCCTGGTCCTGTGGTCCTGTGATCTCGCCATGCCTCCCTTTGCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS-3UTR CCA 90 bp | GGAATCAAAATTCTACCAGCTCCAGCCCTAGGAAGTCATGAGAGAAGAGGGCTCTTTGGGAGGCCGATGTaGGCAGATCACGAGTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GIKILPAPALGSHERRGLFGRPM*ADHEFR Trigger: CCTGAACTCGTGATCTGCCCACATCGGCCTCCCAAA...GAGCCCTCTTCTCTCATGACTTCCTAGGGCTGGAGCTGGTAGAATTTTGATTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS-3UTR CCA 90 bp | GGAATCAAAATTCTACCAGCTCCAGCCCTAGGAAGTCATGAGAGAAGAGGGCTCTGGATGCTGCAGCACTaGCGGCCAAGCAAGACAAGA | + |
|
Preference number: 4 (lower is better) Translates to: GIKILPAPALGSHERRGLWMLQH*RPSKTR Trigger: TCTTGTCTTGCTTGGCCGCCAGTGCTGCAGCATCCA...GAGCCCTCTTCTCTCATGACTTCCTAGGGCTGGAGCTGGTAGAATTTTGATTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS-3UTR TCA 90 bp | GGCAGACTGGTTTCCTCTAATTATTCATCAGCTTGCACCTGGCACCCAAAGTGGATGCATGTGTCCTTCTaGCCAGTTCCACGCAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GRLVSSNYSSACTWHPKWMHVSF*PVPRRA Trigger: TGCTCTGCGTGGAACTGGTCAGAAGGACACATGCAT...CCACTTTGGGTGCCAGGTGCAAGCTGATGAATAATTAGAGGAAACCAGTCTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS-3UTR GCA 90 bp | CAAAGTGGCCACTCCAGCCACCAAGCCTATTTCTGCTTCCAGGGGAAGCATCACCTTCTTCCTTCCACTTaGAGAAGGAATGCGCACTAT | + |
|
Preference number: 4 (lower is better) Translates to: QSGHSSHQAYFCFQGKHHLLPST*RRNAHY Trigger: ATAGTGCGCATTCCTTCTGCAAGTGGAAGGAAGAAG...GTGATGCTTCCCCTGGAAGCAGAAATAGGCTTGGTGGCTGGAGTGGCCACTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS-3UTR GCA 90 bp | CTGCAGCAGTTCCTTAGGTATGCATGTGTCCTTCTGACCAGTTCCACGCAGAGCTGTTGGAGGATAATCTaGTTCTCAGCACTGCCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LQQFLRYACVLLTSSTQSCWRII*FSALPS Trigger: TGAGGGCAGTGCTGAGAAGCAGATTATCCTCCAACA...GCTCTGCGTGGAACTGGTCAGAAGGACACATGCATACCTAAGGAACTGCTGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS-3UTR CCA 90 bp | GGCAGACTGGTTTCCTCTAATTATTCATCAGCTTGCACCTGGCACCCAAAGTGGAATCCATCAGCTCGATaGCAGTGGTGTCTGCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: GRLVSSNYSSACTWHPKWNPSAR*QWCLHR Trigger: CCTGTGCAGACACCACTGCCATCGAGCTGATGGATT...CCACTTTGGGTGCCAGGTGCAAGCTGATGAATAATTAGAGGAAACCAGTCTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS-3UTR CCA 90 bp | AGGCCCAGAGTGGGTCCAAGTAAGCATCCCAGACAGTGTTTGGGCACCAAGAATCCTTTGTGTTGTGAGTaGGCTGTCATCTCTCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RPRVGPSKHPRQCLGTKNPLCCE*AVISLF Trigger: GAAGAGAGAGATGACAGCCCACTCACAACACAAAGG...ATTCTTGGTGCCCAAACACTGTCTGGGATGCTTACTTGGACCCACTCTGGGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS-3UTR CCA 90 bp | ATTCTTTCCAGGTGTATGGAGCCAGAAAAGGGGAGAAGCTATGCCTTGTGGAGACTAATCCCAGCACTTTaGGAGGCCGATGTGGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: ILSRCMEPEKGRSYALWRLIPAL*EADVGR Trigger: TCTGCCCACATCGGCCTCCCAAAGTGCTGGGATTAG...TCTCCACAAGGCATAGCTTCTCCCCTTTTCTGGCTCCATACACCTGGAAAGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| 3UTR CAA 72 bp | GCCCTAGGAAGTCATGAGAGAAGAGGGCTCTTTGTGTaGTGCCTTTGTGTTGTGAGTGGGCTGTCATCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: ALGSHERRGLFV*CLCVVSGLSSL Trigger: GAGAGATGACAGCCCACTCACAACACAAAGGCACAACACAAAGAGCCCTCTTCTCTCATGACTTCCTAGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS-3UTR TCA 90 bp | TTCTTTCCAGGTGTATGGAGCCAGAAAAGGGGAGAAGCTATGCCTTGTGGAGAGGCAGTGTTTGACAGGTaGAATGAGCCCTTCCCAACT | + |
|
Preference number: 4 (lower is better) Translates to: FFPGVWSQKRGEAMPCGEAVFDR*NEPFPT Trigger: AGTTGGGAAGGGCTCATTTCACCTGTCAAACACTGC...CTCTCCACAAGGCATAGCTTCTCCCCTTTTCTGGCTCCATACACCTGGAAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS-3UTR GCA 90 bp | GGAATCAAAATTCTACCAGCTCCAGCCCTAGGAAGTCATGAGAGAAGAGGGCTCCTTGTCCGACGAGCATaGACTTGTGTTGTAGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: GIKILPAPALGSHERRGLLVRRA*TCVVDS Trigger: GCTGTCTACAACACAAGTGCATGCTCGTCGGACAAG...GAGCCCTCTTCTCTCATGACTTCCTAGGGCTGGAGCTGGTAGAATTTTGATTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS-3UTR GCA 90 bp | AAAAGATCCTGCAGAGGATGGAAAGAAAGAGGGTCCGTGCAGAGAAGTTCAGGATCACCTGGGATTTGCTaGCACCTAGGATCTTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: KRSCRGWKERGSVQRSSGSPGIC*HLGSST Trigger: CGTGGAAGATCCTAGGTGGCAGCAAATCCCAGGTGA...TCCTGAACTTCTCTGCACGGACCCTCTTTCTTTCCATCCTCTGCAGGATCTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS-3UTR GCA 90 bp | GGCAGACTGGTTTCCTCTAATTATTCATCAGCTTGCACCTGGCACCCAAAGTGGCAAGTCCAGCCCTGTTaGACTTCAGCTGAGAGTACT | + |
|
Preference number: 4 (lower is better) Translates to: GRLVSSNYSSACTWHPKWQVQPC*TSAEST Trigger: AGTACTCTCAGCTGAAGTGCAACAGGGCTGGACTTG...CCACTTTGGGTGCCAGGTGCAAGCTGATGAATAATTAGAGGAAACCAGTCTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS-3UTR CCA 90 bp | CGTACTTTACAAAGTAATAGAATATCACAAGGCAAAGGGAGGCATGGCGAGATCTGGGCCTGGTGGGCCTaGCTCAATTCTCCTCGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: RTLQSNRISQGKGRHGEIWAWWA*LNSPRL Trigger: TAGCCGAGGAGAATTGAGCCAGGCCCACCAGGCCCA...GATCTCGCCATGCCTCCCTTTGCCTTGTGATATTCTATTACTTTGTAAAGTACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS-3UTR CCA 90 bp | CAAAGTGGCCACTCCAGCCACCAAGCCTATTTCTGCTTCCAGGGGAAGCATCACCTTGGTGGTCTTTGTTaGAGGATAATCTGCTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: QSGHSSHQAYFCFQGKHHLGGLC*RIICFS Trigger: TGAGAAGCAGATTATCCTCCAACAAAGACCACCAAG...GTGATGCTTCCCCTGGAAGCAGAAATAGGCTTGGTGGCTGGAGTGGCCACTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS-3UTR CCA 90 bp | CTGCAGCAGTTCCTTAGGTATGCATGTGTCCTTCTGACCAGTTCCACGCAGAGCCAAGCCCTTCCTTGGTaGTCTTTGTTGGAGGATAAT | + |
|
Preference number: 4 (lower is better) Translates to: LQQFLRYACVLLTSSTQSQALPW*SLLEDN Trigger: ATTATCCTCCAACAAAGACCACCAAGGAAGGGCTTG...GCTCTGCGTGGAACTGGTCAGAAGGACACATGCATACCTAAGGAACTGCTGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS-3UTR CCA 90 bp | GGGAGCGCTATGGGAGACTGGGGTCTATTTGACCCCTACAGTCTACAGACCATAATCCCAGACAGTGTTTaGGCACCAAGAATTCAGACT | + |
|
Preference number: 4 (lower is better) Translates to: GSAMGDWGLFDPYSLQTIIPDSV*APRIQT Trigger: AGTCTGAATTCTTGGTGCCCAAACACTGTCTGGGAT...TATGGTCTGTAGACTGTAGGGGTCAAATAGACCCCAGTCTCCCATAGCGCTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS-3UTR TCA 90 bp | CAAAGTGGCCACTCCAGCCACCAAGCCTATTTCTGCTTCCAGGGGAAGCATCACCCAAAGGGATCTTGTTaGTCTCCAGATATTCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QSGHSSHQAYFCFQGKHHPKGSC*SPDILS Trigger: AGAAAGAATATCTGGAGATCAACAAGATCCCTTTGG...GTGATGCTTCCCCTGGAAGCAGAAATAGGCTTGGTGGCTGGAGTGGCCACTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS-3UTR TCA 90 bp | CAAAGTGGCCACTCCAGCCACCAAGCCTATTTCTGCTTCCAGGGGAAGCATCACCCTCCCATTTGCTTTTaGAAGAAGAGAAATATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QSGHSSHQAYFCFQGKHHPPICF*KKRNMA Trigger: AGCCATATTTCTCTTCTTTCAAAAGCAAATGGGAGG...GTGATGCTTCCCCTGGAAGCAGAAATAGGCTTGGTGGCTGGAGTGGCCACTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS-3UTR GCA 90 bp | GGAATCAAAATTCTACCAGCTCCAGCCCTAGGAAGTCATGAGAGAAGAGGGCTCACCAAAAAGCCACAGTaGATTCCACATGAGAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GIKILPAPALGSHERRGLTKKPQ*IPHESS Trigger: GCTGCTCTCATGTGGAATGCACTGTGGCTTTTTGGT...GAGCCCTCTTCTCTCATGACTTCCTAGGGCTGGAGCTGGTAGAATTTTGATTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS-3UTR GCA 90 bp | TTCCTAATAAGCCTGGGAGCGCTATGGGAGACTGGGGTCTATTTGACCCCTACATCTGCTTCTCAGCACTaGCCTCATCCTCTTTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: FLISLGALWETGVYLTPTSASQH*PHPLFK Trigger: TTTGAAAAGAGGATGAGGGCAGTGCTGAGAAGCAGA...TGTAGGGGTCAAATAGACCCCAGTCTCCCATAGCGCTCCCAGGCTTATTAGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS-3UTR GCA 90 bp | CTCTTCTCTGTTTTTCTCTATACATCAACTGCATTCTCTCTGAGGGGCAGACTGAGCTTTCCACTCCCCTaGCTGCCTTTGACTCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LFSVFLYTSTAFSLRGRLSFPLP*LPLTLC Trigger: GCAGAGAGTCAAAGGCAGGCAGGGGAGTGGAAAGCT...CAGTCTGCCCCTCAGAGAGAATGCAGTTGATGTATAGAGAAAAACAGAGAAGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS-3UTR CCA 90 bp | CCTCTGGTCCAGCCAAGCCACACAGGTCATAGGTCACTGGCCAGTCTCTTAGGTTTACAATATTCAGTGTaGATGGGGCTTAGAGATCAT | + |
|
Preference number: 4 (lower is better) Translates to: PLVQPSHTGHRSLASLLGLQYSV*MGLRDH Trigger: ATGATCTCTAAGCCCCATCCACACTGAATATTGTAA...ACCTAAGAGACTGGCCAGTGACCTATGACCTGTGTGGCTTGGCTGGACCAGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS-3UTR CCA 90 bp | AGGCCCAGAGTGGGTCCAAGTAAGCATCCCAGACAGTGTTTGGGCACCAAGAATCACAAGGGTATTCATTaGGGAAGTGATAAGTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RPRVGPSKHPRQCLGTKNHKGIH*GSDKCP Trigger: TGGACACTTATCACTTCCCCAATGAATACCCTTGTG...ATTCTTGGTGCCCAAACACTGTCTGGGATGCTTACTTGGACCCACTCTGGGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS-3UTR TCA 90 bp | CCTGCAGAGGATGGAAAGAAAGAGGGTCCGTGCAGAGAAGTTCAGGAAGGACTTGTCTCTCTTATTCCCTaGACAATTGCTGTTATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PAEDGKKEGPCREVQEGLVSLIP*TIAVIL Trigger: CAGGATAACAGCAATTGTTCAGGGAATAAGAGAGAC...AAGTCCTTCCTGAACTTCTCTGCACGGACCCTCTTTCTTTCCATCCTCTGCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS-3UTR TCA 90 bp | AGGCCCAGAGTGGGTCCAAGTAAGCATCCCAGACAGTGTTTGGGCACCAAGAATAGGGATGTTCCTTGCTaGGAAAAAGAATTCAGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: RPRVGPSKHPRQCLGTKNRDVPC*EKEFSD Trigger: ATCACTGAATTCTTTTTCTCAGCAAGGAACATCCCT...ATTCTTGGTGCCCAAACACTGTCTGGGATGCTTACTTGGACCCACTCTGGGCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS-3UTR GCA 90 bp | GGAATCAAAATTCTACCAGCTCCAGCCCTAGGAAGTCATGAGAGAAGAGGGCTCACTCATGTGGATTGTTaGCTTAGCTGTGACCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GIKILPAPALGSHERRGLTHVDC*LSCDLL Trigger: CAAGAGGTCACAGCTAAGGCAACAATCCACATGAGT...GAGCCCTCTTCTCTCATGACTTCCTAGGGCTGGAGCTGGTAGAATTTTGATTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS-3UTR GCA 90 bp | ATTCTTTCCAGGTGTATGGAGCCAGAAAAGGGGAGAAGCTATGCCTTGTGGAGAATGGAGTCACCACACTaGTCAGAACCAAAGGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: ILSRCMEPEKGRSYALWRMESPH*SEPKGS Trigger: AGATCCCTTTGGTTCTGAGCAGTGTGGTGACTCCAT...TCTCCACAAGGCATAGCTTCTCCCCTTTTCTGGCTCCATACACCTGGAAAGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS-3UTR GCA 90 bp | GGCAGACTGGTTTCCTCTAATTATTCATCAGCTTGCACCTGGCACCCAAAGTGGGCAGGTGATGGGTTATaGCTTCAGTCAGATTATCCA | + |
|
Preference number: 4 (lower is better) Translates to: GRLVSSNYSSACTWHPKWAGDGL*LQSDYP Trigger: TGGATAATCTGACTGAAGGCATAACCCATCACCTGC...CCACTTTGGGTGCCAGGTGCAAGCTGATGAATAATTAGAGGAAACCAGTCTGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS-3UTR CCA 90 bp | ATTCTTTCCAGGTGTATGGAGCCAGAAAAGGGGAGAAGCTATGCCTTGTGGAGACCTTCCCAACTCATGTaGATTGTTGCCTTAGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: ILSRCMEPEKGRSYALWRPSQLM*IVALAV Trigger: CACAGCTAAGGCAACAATCCACATGAGTTGGGAAGG...TCTCCACAAGGCATAGCTTCTCCCCTTTTCTGGCTCCATACACCTGGAAAGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS-3UTR TCA 90 bp | TCCTCAGCTGACAGGATTAAGAGATTAAAGACAGGCATAGGAAATCACAAGGGTAAGTGTCCCTGCAGGTaGTGGGTTATGCCTTCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SSADRIKRLKTGIGNHKGKCPCR*WVMPSV Trigger: GACTGAAGGCATAACCCATCACCTGCAGGGACACTT...ACCCTTGTGATTTCCTATGCCTGTCTTTAATCTCTTAATCCTGTCAGCTGAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS-3UTR GCA 90 bp | CCTGCAGAGGATGGAAAGAAAGAGGGTCCGTGCAGAGAAGTTCAGGAAGGACTTATAACACAGATGACATaGACCCAACACAATCATTGC | + |
|
Preference number: 4 (lower is better) Translates to: PAEDGKKEGPCREVQEGLITQMT*TQHNHC Trigger: GCAATGATTGTGTTGGGTGCATGTCATCTGTGTTAT...AAGTCCTTCCTGAACTTCTCTGCACGGACCCTCTTTCTTTCCATCCTCTGCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS-3UTR CCA 90 bp | CAAGATAGCTCAATAAAAAGGGATTTCATTTACAGGTACAGGCAAAACACATCACAGTCCAGTTACCCATaGGCCTGGTGGGCCTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: QDSSIKRDFIYRYRQNTSQSSYP*AWWAWL Trigger: GAGCCAGGCCCACCAGGCCCATGGGTAACTGGACTG...TGATGTGTTTTGCCTGTACCTGTAAATGAAATCCCTTTTTATTGAGCTATCTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| 3UTR CAA 72 bp | GTTCAGGAAGGACTTCGTGTCAAGCCGATAGAACAGTaGTGTTCGGGATCCATAAAGAAATGGGGCCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: VQEGLRVKPIEQ*CSGSIKKWGQT Trigger: TGTTTGGCCCCATTTCTTTATGGATCCCGAACACAACTGTTCTATCGGCTTGACACGAAGTCCTTCCTGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS-3UTR CCA 90 bp | GGCAGACTGGTTTCCTCTAATTATTCATCAGCTTGCACCTGGCACCCAAAGTGGTGTGTTGTAGACAGCTaGAAGGTACATGTTGGATTT | + |
|
Preference number: 4 (lower is better) Translates to: GRLVSSNYSSACTWHPKWCVVDS*KVHVGF Trigger: AAATCCAACATGTACCTTCCAGCTGTCTACAACACA...CCACTTTGGGTGCCAGGTGCAAGCTGATGAATAATTAGAGGAAACCAGTCTGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS-3UTR GCA 90 bp | CAAGATAGCTCAATAAAAAGGGATTTCATTTACAGGTACAGGCAAAACACATCATCCCTCCGTTTGGGGTaGCTGACTTCCCGCAACACT | + |
|
Preference number: 4 (lower is better) Translates to: QDSSIKRDFIYRYRQNTSSLRLG*LTSRNT Trigger: AGTGTTGCGGGAAGTCAGGCACCCCAAACGGAGGGA...TGATGTGTTTTGCCTGTACCTGTAAATGAAATCCCTTTTTATTGAGCTATCTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS-3UTR TCA 90 bp | TGTTCAAACACACATGCTCTACAATTTGTGCAGTTAACACAATTATCACATGGTTCCCCTGCCTGCCTTTaGCTCTCTGCCAAATGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: CSNTHALQFVQLTQLSHGSPACL*LSAKCK Trigger: CTTGCATTTGGCAGAGAGTCAAAGGCAGGCAGGGGA...ACCATGTGATAATTGTGTTAACTGCACAAATTGTAGAGCATGTGTGTTTGAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS-3UTR CCA 90 bp | TGTTCAAACACACATGCTCTACAATTTGTGCAGTTAACACAATTATCACATGGTCCACAGAAGGGCAGCTaGGAGATGAGGATGGTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: CSNTHALQFVQLTQLSHGPQKGS*EMRMVG Trigger: TCCAACCATCCTCATCTCCCAGCTGCCCTTCTGTGG...ACCATGTGATAATTGTGTTAACTGCACAAATTGTAGAGCATGTGTGTTTGAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS-3UTR TCA 90 bp | TCCTCAGCTGACAGGATTAAGAGATTAAAGACAGGCATAGGAAATCACAAGGGTGCACTATGGTCAAGATaGTGTACGTATAGGAATAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSADRIKRLKTGIGNHKGALWSR*CTYRNR Trigger: CCTATTCCTATACGTACATCATCTTGACCATAGTGC...ACCCTTGTGATTTCCTATGCCTGTCTTTAATCTCTTAATCCTGTCAGCTGAGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS-3UTR CCA 90 bp | TGGAGAGATAATGAACTTTGTAGTCAAGCTGCTTTTTGGTCACAAGAATCTAAGAGATCCTGCAGAGGATaGAAAGAAAGAGGGTCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: WRDNELCSQAAFWSQESKRSCRG*KERGSV Trigger: CACGGACCCTCTTTCTTTCCATCCTCTGCAGGATCT...CTTAGATTCTTGTGACCAAAAAGCAGCTTGACTACAAAGTTCATTATCTCTCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| 3UTR CAA 72 bp | CAGAGTTTAAGGTTGTCTCTCTTATTCCCTGAACAATaGCTGTTATCCTGTTCTTTTTCCAAGGTGCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: QSLRLSLLFPEQ*LLSCSFSKVPR Trigger: TCTGGGCACCTTGGAAAAAGAACAGGATAACAGCAATTGTTCAGGGAATAAGAGAGACAACCTTAAACTCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| 3UTR CAA 72 bp | AGATCACAGGACCACAGGACCAGGGTGAAATTAAAATaGCTAATGAAGTTTCGGGCACCATTGTCATTGATA | + |
|
Preference number: 4 (lower is better) Translates to: RSQDHRTRVKLK*LMKFRAPLSLI Trigger: TATCAATGACAATGGTGCCCGAAACTTCATTAGCAATTTTAATTTCACCCTGGTCCTGTGGTCCTGTGATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540461.2 |
||
| CDS-3UTR TCA 90 bp | TGTTCAAACACACATGCTCTACAATTTGTGCAGTTAACACAATTATCACATGGTTGTGCCTTTGTGTTGTaGGTGGGCTGTCATCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: CSNTHALQFVQLTQLSHGCAFVL*VGCHLS Trigger: AGAGAGATGACAGCCCACTCACAACACAAAGGCACA...ACCATGTGATAATTGTGTTAACTGCACAAATTGTAGAGCATGTGTGTTTGAACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS-3UTR GCA 90 bp | GGTGAAATTAAAATTGCTAATGAAGTTTCGGGCACCATTGTCATTGATAACATCTGTTCACCTGGGATTTaGTGCCACCTAGGATCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GEIKIANEVSGTIVIDNICSPGI*CHLGSS Trigger: GGAAGATCCTAGGTGGCAGCAAATCCCAGGTGAACA...GATGTTATCAATGACAATGGTGCCCGAAACTTCATTAGCAATTTTAATTTCACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS-3UTR GCA 90 bp | TCCTCAGCTGACAGGATTAAGAGATTAAAGACAGGCATAGGAAATCACAAGGGTGGAGGAACTCAACTGTaGCCAAGAAAAAGTAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SSADRIKRLKTGIGNHKGGGTQL*PRKSRN Trigger: ATTTCTACTTTTTCTTGGGCACAGTTGAGTTCCTCC...ACCCTTGTGATTTCCTATGCCTGTCTTTAATCTCTTAATCCTGTCAGCTGAGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000540461.2 |
||
| CDS-3UTR GCA 90 bp | GATAATGAACTTTGTAGTCAAGCTGCTTTTTGGTCACAAGAATCTAAGACCTTCCTGCCTTTGACTCTCTaGCAAATGCAAGTGATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: DNELCSQAAFWSQESKTFLPLTL*QMQVMV Trigger: CACCATCACTTGCATTTGGCAGAGAGTCAAAGGCAG...GAAGGTCTTAGATTCTTGTGACCAAAAAGCAGCTTGACTACAAAGTTCATTATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS-3UTR CCA 90 bp | TCTTTCCCAGGGATGTTCCTTGCTGAGAAAAAGAATTCAGTGATATTCCTCCCACTAGCTCTGAATAAGTaGCATCTGTGCTCATTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: SFPGMFLAEKKNSVIFLPLALNK*HLCSFK Trigger: CTTAAATGAGCACAGATGCCACTTATTCAGAGCTAG...TGGGAGGAATATCACTGAATTCTTTTTCTCAGCAAGGAACATCCCTGGGAAAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS-3UTR TCA 90 bp | CAAGATAGCTCAATAAAAAGGGATTTCATTTACAGGTACAGGCAAAACACATCAGGTCACAGATTAAAGTaGAAACCAAGGCCAGCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: QDSSIKRDFIYRYRQNTSGHRLK*KPRPAF Trigger: GAACGCTGGCCTTGGTTTTCACTTTAATCTGTGACC...TGATGTGTTTTGCCTGTACCTGTAAATGAAATCCCTTTTTATTGAGCTATCTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS-3UTR GCA 90 bp | CTCTTCTCTGTTTTTCTCTATACATCAACTGCATTCTCTCTGAGGGGCAGACTGTTTCTAAAAAGATCCTaGAGAGGATGGAAAGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LFSVFLYTSTAFSLRGRLFLKRS*RGWKER Trigger: TCTTTCTTTCCATCCTCTGCAGGATCTTTTTAGAAA...CAGTCTGCCCCTCAGAGAGAATGCAGTTGATGTATAGAGAAAAACAGAGAAGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS-3UTR GCA 90 bp | GATAATGAACTTTGTAGTCAAGCTGCTTTTTGGTCACAAGAATCTAAGACCTTCATTGAAAAGCTGGTTTaGACTGAGCTGAACCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: DNELCSQAAFWSQESKTFIEKLV*TELNHR Trigger: CCTGTGGTTCAGCTCAGTGCAAACCAGCTTTTCAAT...GAAGGTCTTAGATTCTTGTGACCAAAAAGCAGCTTGACTACAAAGTTCATTATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS-3UTR CCA 90 bp | TGTTCAAACACACATGCTCTACAATTTGTGCAGTTAACACAATTATCACATGGTGGAGATGAGGATGGTTaGAAAGAGCACAGACAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: CSNTHALQFVQLTQLSHGGDEDG*KEHRQE Trigger: TTCCTGTCTGTGCTCTTTCCAACCATCCTCATCTCC...ACCATGTGATAATTGTGTTAACTGCACAAATTGTAGAGCATGTGTGTTTGAACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS-3UTR GCA 90 bp | GGTGAAATTAAAATTGCTAATGAAGTTTCGGGCACCATTGTCATTGATAACATCATGTCCACAGAACTCTaGAGCAGTTCCTTAGGTATG | + |
|
Preference number: 4 (lower is better) Translates to: GEIKIANEVSGTIVIDNIMSTEL*SSSLGM Trigger: CATACCTAAGGAACTGCTGCAGAGTTCTGTGGACAT...GATGTTATCAATGACAATGGTGCCCGAAACTTCATTAGCAATTTTAATTTCACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS-3UTR CCA 90 bp | CAAGATAGCTCAATAAAAAGGGATTTCATTTACAGGTACAGGCAAAACACATCATTCTTTCCAGGTGTATaGAGCCAGAAAAGGGGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: QDSSIKRDFIYRYRQNTSFFPGV*SQKRGE Trigger: TTCTCCCCTTTTCTGGCTCCATACACCTGGAAAGAA...TGATGTGTTTTGCCTGTACCTGTAAATGAAATCCCTTTTTATTGAGCTATCTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS-3UTR TCA 90 bp | CAAGATAGCTCAATAAAAAGGGATTTCATTTACAGGTACAGGCAAAACACATCAAGTGATAAGTGTCCATaGAATCTTCACTATCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: QDSSIKRDFIYRYRQNTSSDKCP*NLHYPH Trigger: ATGTGGATAGTGAAGATTTCATGGACACTTATCACT...TGATGTGTTTTGCCTGTACCTGTAAATGAAATCCCTTTTTATTGAGCTATCTTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| 3UTR CAA 72 bp | GTGAAATTAAAATTGCTAATGAAGTTTCGGGCACCATaGTCATTGATAACATCTTATCAGGAGACAGGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: VKLKLLMKFRAP*SLITSYQETGF Trigger: AAACCCTGTCTCCTGATAAGATGTTATCAATGACAATGGTGCCCGAAACTTCATTAGCAATTTTAATTTCAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS-3UTR CAA 90 bp | CAAAGTGGCCACTCCAGCCACCAAGCCTATTTCTGCTTCCAGGGGAAGCATCACTCTCCTCGGCTAGGGTaGCCTTATGCCACCTCCACG | + |
|
Preference number: 5 (lower is better) Translates to: QSGHSSHQAYFCFQGKHHSPRLG*PYATST Trigger: CGTGGAGGTGGCATAAGGCAACCCTAGCCGAGGAGA...GTGATGCTTCCCCTGGAAGCAGAAATAGGCTTGGTGGCTGGAGTGGCCACTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS-3UTR CAA 90 bp | AAAAGATCCTGCAGAGGATGGAAAGAAAGAGGGTCCGTGCAGAGAAGTTCAGGAAGCCGGTCCCTCCGTTaGGGGTGCCTGACTTCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: KRSCRGWKERGSVQRSSGSRSLR*GCLTSR Trigger: GCGGGAAGTCAGGCACCCCAAACGGAGGGACCGGCT...TCCTGAACTTCTCTGCACGGACCCTCTTTCTTTCCATCCTCTGCAGGATCTTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS-3UTR CAA 90 bp | GGCACCCAAAGTGGCCACTCCAGCCACCAAGCCTATTTCTGCTTCCAGGGGAAGCATCCCAGACAGTGTTaGGGCACCAAGAATTCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: GTQSGHSSHQAYFCFQGKHPRQC*GTKNSD Trigger: GTCTGAATTCTTGGTGCCCAAACACTGTCTGGGATG...CTTCCCCTGGAAGCAGAAATAGGCTTGGTGGCTGGAGTGGCCACTTTGGGTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS-3UTR CAA 90 bp | GGCCACTCCAGCCACCAAGCCTATTTCTGCTTCCAGGGGAAGCATCACACTTGTCCTTCTTCCTTCCACTaGCAGAAGGAATGCGCACTA | + |
|
Preference number: 5 (lower is better) Translates to: GHSSHQAYFCFQGKHHTCPSSFH*QKECAL Trigger: TAGTGCGCATTCCTTCTGCAAGTGGAAGGAAGAAGG...ACAAGTGTGATGCTTCCCCTGGAAGCAGAAATAGGCTTGGTGGCTGGAGTGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS-3UTR CAA 90 bp | TTCCTAATAAGCCTGGGAGCGCTATGGGAGACTGGGGTCTATTTGACCCCTACACTCCCCTGCCTGCCTTaGACTCTCTGCCAAATGCAA | + |
|
Preference number: 5 (lower is better) Translates to: FLISLGALWETGVYLTPTLPCLP*TLCQMQ Trigger: TTGCATTTGGCAGAGAGTCAAAGGCAGGCAGGGGAG...TGTAGGGGTCAAATAGACCCCAGTCTCCCATAGCGCTCCCAGGCTTATTAGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS CCA 90 bp | GAGCAGCAGTGTTTGACAGGTGAAATGAGCCCTTCCCAACTCATGTaGATTGTTGCCTTAGCTGTGACCTCTTGTCCGACGAGCATGCAC | + |
|
Preference number: 5 (lower is better) Translates to: EQQCLTGEMSPSQLM*IVALAVTSCPTSMH Trigger: GTGCATGCTCGTCGGACAAGAGGTCACAGCTAAGGCAACAATCCACATGAGTTGGGAAGGGCTCATTTCACCTGTCAAACACTGCTGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS-3UTR CAA 90 bp | TCATCAGCTTGCACCTGGCACCCAAAGTGGCCACTCCAGCCACCAAGCCTATTTGGGGAAGCATCACACTaGTGTGGAATAATCTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: SSACTWHPKWPLQPPSLFGEASH*CGIISV Trigger: CACAGAGATTATTCCACACAAGTGTGATGCTTCCCC...AAATAGGCTTGGTGGCTGGAGTGGCCACTTTGGGTGCCAGGTGCAAGCTGATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS GCA 90 bp | GCCTTATGCCACCTCCACGGCTCAGTCTGTTCACCTGGGATTTGCTaGCACCTAGGATCTTCCACGGTAATTATCTTGACCAAAAAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: ALCHLHGSVCSPGIC*HLGSSTVIILTKKP Trigger: TGGCTTTTTGGTCAAGATAATTACCGTGGAAGATCCTAGGTGGCAGCAAATCCCAGGTGAACAGACTGAGCCGTGGAGGTGGCATAAGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS-3UTR CAA 90 bp | TTCTTTCCAGGTGTATGGAGCCAGAAAAGGGGAGAAGCTATGCCTTGTGGAGAGCCGACGAGCATGCACTaGTGTTGTAGACAGCTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: FFPGVWSQKRGEAMPCGEPTSMH*CCRQLE Trigger: TTCCAGCTGTCTACAACACAAGTGCATGCTCGTCGG...CTCTCCACAAGGCATAGCTTCTCCCCTTTTCTGGCTCCATACACCTGGAAAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS-3UTR CAA 90 bp | GGAATCAAAATTCTACCAGCTCCAGCCCTAGGAAGTCATGAGAGAAGAGGGCTCCTTAGCTGTGACCTCTaGTCCGACGAGCATGCACTT | + |
|
Preference number: 5 (lower is better) Translates to: GIKILPAPALGSHERRGLLSCDL*SDEHAL Trigger: AAGTGCATGCTCGTCGGACAAGAGGTCACAGCTAAG...GAGCCCTCTTCTCTCATGACTTCCTAGGGCTGGAGCTGGTAGAATTTTGATTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS-3UTR CAA 90 bp | TTCTTTCCAGGTGTATGGAGCCAGAAAAGGGGAGAAGCTATGCCTTGTGGAGAGCTGTTCACCTGGGATTaGCTGCCACCTAGGATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: FFPGVWSQKRGEAMPCGELFTWD*LPPRIF Trigger: GAAGATCCTAGGTGGCAGCAAATCCCAGGTGAACAG...CTCTCCACAAGGCATAGCTTCTCCCCTTTTCTGGCTCCATACACCTGGAAAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS-3UTR CAA 90 bp | AAGGCAAAGGGAGGCATGGCGAGATCACAGGACCACAGGACCAGGGTGAAATTATCCCTAGATCCTAAGTaGGCCAACACTTTTGGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: KAKGGMARSQDHRTRVKLSLDPK*ANTFGE Trigger: CTCTCCAAAAGTGTTGGCCAACTTAGGATCTAGGGA...TAATTTCACCCTGGTCCTGTGGTCCTGTGATCTCGCCATGCCTCCCTTTGCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS-3UTR CAA 90 bp | GGCACCCAAAGTGGCCACTCCAGCCACCAAGCCTATTTCTGCTTCCAGGGGAAGACCAAAGGGATCTTGTaGATCTCCAGATATTCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: GTQSGHSSHQAYFCFQGKTKGIL*ISRYSF Trigger: GAAAGAATATCTGGAGATCAACAAGATCCCTTTGGT...CTTCCCCTGGAAGCAGAAATAGGCTTGGTGGCTGGAGTGGCCACTTTGGGTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS-3UTR CAA 90 bp | GGCCACTCCAGCCACCAAGCCTATTTCTGCTTCCAGGGGAAGCATCACACTTGTGGGAGAAGCTATGCCTaGTGGAGAGATAATGAACTT | + |
|
Preference number: 5 (lower is better) Translates to: GHSSHQAYFCFQGKHHTCGRSYA*WRDNEL Trigger: AAGTTCATTATCTCTCCACAAGGCATAGCTTCTCCC...ACAAGTGTGATGCTTCCCCTGGAAGCAGAAATAGGCTTGGTGGCTGGAGTGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS GCA 90 bp | GTTGCCTTATGCCACCTCCACGGCTCAGTCTGTTCACCTGGGATTTaGTGCCACCTAGGATCTTCCACGGTAATTATCTTGACCAAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: VALCHLHGSVCSPGI*CHLGSSTVIILTKK Trigger: CTTTTTGGTCAAGATAATTACCGTGGAAGATCCTAGGTGGCAGCAAATCCCAGGTGAACAGACTGAGCCGTGGAGGTGGCATAAGGCAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS-3UTR CAA 90 bp | CAAAGTGGCCACTCCAGCCACCAAGCCTATTTCTGCTTCCAGGGGAAGCATCACGTATATATAAAGGGGTaGAGGAATGGAGTCACCACA | + |
|
Preference number: 5 (lower is better) Translates to: QSGHSSHQAYFCFQGKHHVYIKG*RNGVTT Trigger: TGTGGTGACTCCATTCCTCAACCCCTTTATATATAC...GTGATGCTTCCCCTGGAAGCAGAAATAGGCTTGGTGGCTGGAGTGGCCACTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS-3UTR CAA 90 bp | AAGGCAAAGGGAGGCATGGCGAGATCACAGGACCACAGGACCAGGGTGAAATTAAAGCCGATAGAACAGTaGTGTTCGGGATCCATAAAG | + |
|
Preference number: 5 (lower is better) Translates to: KAKGGMARSQDHRTRVKLKPIEQ*CSGSIK Trigger: CTTTATGGATCCCGAACACAACTGTTCTATCGGCTT...TAATTTCACCCTGGTCCTGTGGTCCTGTGATCTCGCCATGCCTCCCTTTGCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS TCA 90 bp | CCTTCTTCCTTCCACTTGCAGAAGGAATGCGCACTATGGTCAAGATaGTGTACGTATAGGAATAGGCCACGAGGACTATGCAGCAGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: PSSFHLQKECALWSR*CTYRNRPRGLCSRG Trigger: TCCTCTGCTGCATAGTCCTCGTGGCCTATTCCTATACGTACATCATCTTGACCATAGTGCGCATTCCTTCTGCAAGTGGAAGGAAGAAGG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540461.2 |
||
| CDS CCA 90 bp | AGACACATGGTGGAGAAGAGCAAGCCCTTCCTTGGTGGTCTTTGTTaGAGGATAATCTGCTTCTCAGCACTGCCCTCATCCTCTTTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: RHMVEKSKPFLGGLC*RIICFSALPSSSFQ Trigger: TTGAAAAGAGGATGAGGGCAGTGCTGAGAAGCAGATTATCCTCCAACAAAGACCACCAAGGAAGGGCTTGCTCTTCTCCACCATGTGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS TCA 90 bp | AAAAGCCACAGTGCATTCCACATGAGAGCAGCAGTGTTTGACAGGTaGAATGAGCCCTTCCCAACTCATGTGGATTGTTGCCTTAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: KSHSAFHMRAAVFDR*NEPFPTHVDCCLSC Trigger: ACAGCTAAGGCAACAATCCACATGAGTTGGGAAGGGCTCATTTCACCTGTCAAACACTGCTGCTCTCATGTGGAATGCACTGTGGCTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS GCA 90 bp | GAGAAGAGCAAGCCCTTCCTTGGTGGTCTTTGTTGGAGGATAATCTaGTTCTCAGCACTGCCCTCATCCTCTTTTCAAAAACTCCTCGAA | + |
|
Preference number: 5 (lower is better) Translates to: EKSKPFLGGLCWRII*FSALPSSSFQKLLE Trigger: TTCGAGGAGTTTTTGAAAAGAGGATGAGGGCAGTGCTGAGAAGCAGATTATCCTCCAACAAAGACCACCAAGGAAGGGCTTGCTCTTCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS-3UTR CAA 90 bp | GGAATCAAAATTCTACCAGCTCCAGCCCTAGGAAGTCATGAGAGAAGAGGGCTCAGAACCAAAGGGATCTaGTTGATCTCCAGATATTCT | + |
|
Preference number: 5 (lower is better) Translates to: GIKILPAPALGSHERRGLRTKGI*LISRYS Trigger: AGAATATCTGGAGATCAACAAGATCCCTTTGGTTCT...GAGCCCTCTTCTCTCATGACTTCCTAGGGCTGGAGCTGGTAGAATTTTGATTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540461.2 |
||
| CDS-3UTR CAA 90 bp | TGGAGAGATAATGAACTTTGTAGTCAAGCTGCTTTTTGGTCACAAGAATCTAAGAGAGCAAGCCCTTCCTaGGTGGTCTTTGTTGGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: WRDNELCSQAAFWSQESKRASPS*VVFVGG Trigger: TCCTCCAACAAAGACCACCAAGGAAGGGCTTGCTCT...CTTAGATTCTTGTGACCAAAAAGCAGCTTGACTACAAAGTTCATTATCTCTCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000540461.2 |
||
| CDS-3UTR CAA 90 bp | GATAATGAACTTTGTAGTCAAGCTGCTTTTTGGTCACAAGAATCTAAGACCTTCTCAGGAGACAGGGTTTaGAGAGCAACCAGTCTGACC | + |
|
Preference number: 5 (lower is better) Translates to: DNELCSQAAFWSQESKTFSGDRV*RATSLT Trigger: GGTCAGACTGGTTGCTCTCAAAACCCTGTCTCCTGA...GAAGGTCTTAGATTCTTGTGACCAAAAAGCAGCTTGACTACAAAGTTCATTATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS-3UTR CAA 90 bp | ACATCTTCCTCAGCTGACAGGATTAAGAGATTAAAGACAGGCATAGGAAATCACTCCACGGTAATTATCTaGACCAAAAAGCCACAGTGC | + |
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Preference number: 5 (lower is better) Translates to: TSSSADRIKRLKTGIGNHSTVII*TKKPQC Trigger: GCACTGTGGCTTTTTGGTCAAGATAATTACCGTGGA...GTGATTTCCTATGCCTGTCTTTAATCTCTTAATCCTGTCAGCTGAGGAAGATGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS-3UTR CAA 90 bp | CGTACTTTACAAAGTAATAGAATATCACAAGGCAAAGGGAGGCATGGCGAGATCGCCCAGATTTCGTATTaGTTCAAACACACATGCTCT | + |
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Preference number: 5 (lower is better) Translates to: RTLQSNRISQGKGRHGEIAQISY*FKHTCS Trigger: AGAGCATGTGTGTTTGAACAAATACGAAATCTGGGC...GATCTCGCCATGCCTCCCTTTGCCTTGTGATATTCTATTACTTTGTAAAGTACG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS-3UTR CAA 90 bp | CAAGATAGCTCAATAAAAAGGGATTTCATTTACAGGTACAGGCAAAACACATCAAGAGGGCTCTTTGTGTaGTGCCTTTGTGTTGTGAGT | + |
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Preference number: 5 (lower is better) Translates to: QDSSIKRDFIYRYRQNTSRGLFV*CLCVVS Trigger: ACTCACAACACAAAGGCACAACACAAAGAGCCCTCT...TGATGTGTTTTGCCTGTACCTGTAAATGAAATCCCTTTTTATTGAGCTATCTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS-3UTR CAA 90 bp | CAAGATAGCTCAATAAAAAGGGATTTCATTTACAGGTACAGGCAAAACACATCAAGAGAAGAGGGCTCTTaGTGTTGTGCCTTTGTGTTG | + |
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Preference number: 5 (lower is better) Translates to: QDSSIKRDFIYRYRQNTSREEGS*CCAFVL Trigger: CAACACAAAGGCACAACACAAAGAGCCCTCTTCTCT...TGATGTGTTTTGCCTGTACCTGTAAATGAAATCCCTTTTTATTGAGCTATCTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS-3UTR CAA 90 bp | CAAGATAGCTCAATAAAAAGGGATTTCATTTACAGGTACAGGCAAAACACATCACTTCCTTGGTGGTCTTaGTTGGAGGATAATCTGCTT | + |
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Preference number: 5 (lower is better) Translates to: QDSSIKRDFIYRYRQNTSLPWWS*LEDNLL Trigger: AAGCAGATTATCCTCCAACAAAGACCACCAAGGAAG...TGATGTGTTTTGCCTGTACCTGTAAATGAAATCCCTTTTTATTGAGCTATCTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS-3UTR CAA 90 bp | GATAATGAACTTTGTAGTCAAGCTGCTTTTTGGTCACAAGAATCTAAGACCTTCAGGGTGAAATTAAAATaGCTAATGAAGTTTCGGGCA | + |
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Preference number: 5 (lower is better) Translates to: DNELCSQAAFWSQESKTFRVKLK*LMKFRA Trigger: TGCCCGAAACTTCATTAGCAATTTTAATTTCACCCT...GAAGGTCTTAGATTCTTGTGACCAAAAAGCAGCTTGACTACAAAGTTCATTATC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS CCA 72 bp | CAGTCACCGCTGCAGTCCAGTTACCCATGGGCCTGGTaGGCCTGGCTCAATTCTCCTCGGCTAGGGTTGCCT | + |
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Preference number: 6 (lower is better) Translates to: QSPLQSSYPWAW*AWLNSPRLGLP Trigger: AGGCAACCCTAGCCGAGGAGAATTGAGCCAGGCCCACCAGGCCCATGGGTAACTGGACTGCAGCGGTGACTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS CCA 72 bp | ACTCAGTCACCGCTGCAGTCCAGTTACCCATGGGCCTaGTGGGCCTGGCTCAATTCTCCTCGGCTAGGGTTG | + |
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Preference number: 6 (lower is better) Translates to: TQSPLQSSYPWA*WAWLNSPRLGL Trigger: CAACCCTAGCCGAGGAGAATTGAGCCAGGCCCACCAGGCCCATGGGTAACTGGACTGCAGCGGTGACTGAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS GCA 72 bp | GGCCTGGCTCAATTCTCCTCGGCTAGGGTTGCCTTATaGCACCTCCACGGCTCAGTCTGTTCACCTGGGATT | + |
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Preference number: 6 (lower is better) Translates to: GLAQFSSARVAL*HLHGSVCSPGI Trigger: AATCCCAGGTGAACAGACTGAGCCGTGGAGGTGGCATAAGGCAACCCTAGCCGAGGAGAATTGAGCCAGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS GCA 72 bp | AAGCATAAAATCCATCAGCTCGATGGCAGTGGTGTCTaGACAGGCCAGGGCCAGCAAGGGTCCACTGTCACA | + |
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Preference number: 6 (lower is better) Translates to: KHKIHQLDGSGV*TGQGQQGSTVT Trigger: TGTGACAGTGGACCCTTGCTGGCCCTGGCCTGTGCAGACACCACTGCCATCGAGCTGATGGATTTTATGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS GCA 72 bp | CACCTCCACGGCTCAGTCTGTTCACCTGGGATTTGCTaGCACCTAGGATCTTCCACGGTAATTATCTTGACC | + |
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Preference number: 6 (lower is better) Translates to: HLHGSVCSPGIC*HLGSSTVIILT Trigger: GGTCAAGATAATTACCGTGGAAGATCCTAGGTGGCAGCAAATCCCAGGTGAACAGACTGAGCCGTGGAGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS GCA 72 bp | TGCCACCTCCACGGCTCAGTCTGTTCACCTGGGATTTaGTGCCACCTAGGATCTTCCACGGTAATTATCTTG | + |
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Preference number: 6 (lower is better) Translates to: CHLHGSVCSPGI*CHLGSSTVIIL Trigger: CAAGATAATTACCGTGGAAGATCCTAGGTGGCAGCAAATCCCAGGTGAACAGACTGAGCCGTGGAGGTGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS CAA 72 bp | ATGCCACCTCCACGGCTCAGTCTGTTCACCTGGGATTaGCTGCCACCTAGGATCTTCCACGGTAATTATCTT | + |
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Preference number: 6 (lower is better) Translates to: MPPPRLSLFTWD*LPPRIFHGNYL Trigger: AAGATAATTACCGTGGAAGATCCTAGGTGGCAGCAAATCCCAGGTGAACAGACTGAGCCGTGGAGGTGGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS CAA 90 bp | GGTTGCCTTATGCCACCTCCACGGCTCAGTCTGTTCACCTGGGATTaGCTGCCACCTAGGATCTTCCACGGTAATTATCTTGACCAAAAA | + |
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Preference number: 6 (lower is better) Translates to: GCLMPPPRLSLFTWD*LPPRIFHGNYLDQK Trigger: TTTTTGGTCAAGATAATTACCGTGGAAGATCCTAGGTGGCAGCAAATCCCAGGTGAACAGACTGAGCCGTGGAGGTGGCATAAGGCAACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS CCA 72 bp | TGTTTGACAGGTGAAATGAGCCCTTCCCAACTCATGTaGATTGTTGCCTTAGCTGTGACCTCTTGTCCGACG | + |
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Preference number: 6 (lower is better) Translates to: CLTGEMSPSQLM*IVALAVTSCPT Trigger: CGTCGGACAAGAGGTCACAGCTAAGGCAACAATCCACATGAGTTGGGAAGGGCTCATTTCACCTGTCAAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS CAA 72 bp | GCCTTAGCTGTGACCTCTTGTCCGACGAGCATGCACTaGTGTTGTAGACAGCTGGAAGGTACATGTTGGATT | + |
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Preference number: 6 (lower is better) Translates to: ALAVTSCPTSMH*CCRQLEGTCWI Trigger: AATCCAACATGTACCTTCCAGCTGTCTACAACACAAGTGCATGCTCGTCGGACAAGAGGTCACAGCTAAGGC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS TCA 72 bp | AGTGCATTCCACATGAGAGCAGCAGTGTTTGACAGGTaGAATGAGCCCTTCCCAACTCATGTGGATTGTTGC | + |
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Preference number: 6 (lower is better) Translates to: SAFHMRAAVFDR*NEPFPTHVDCC Trigger: GCAACAATCCACATGAGTTGGGAAGGGCTCATTTCACCTGTCAAACACTGCTGCTCTCATGTGGAATGCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS CAA 72 bp | GGAGTCACCACACTGCTCAGAACCAAAGGGATCTTGTaGATCTCCAGATATTCTTTCTGGGAGGGAGTCACA | + |
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Preference number: 6 (lower is better) Translates to: GVTTLLRTKGIL*ISRYSFWEGVT Trigger: TGTGACTCCCTCCCAGAAAGAATATCTGGAGATCAACAAGATCCCTTTGGTTCTGAGCAGTGTGGTGACTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS CAA 90 bp | TCACCTGGGATTTGCTGCCACCTAGGATCTTCCACGGTAATTATCTaGACCAAAAAGCCACAGTGCATTCCACATGAGAGCAGCAGTGTT | + |
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Preference number: 6 (lower is better) Translates to: SPGICCHLGSSTVII*TKKPQCIPHESSSV Trigger: AACACTGCTGCTCTCATGTGGAATGCACTGTGGCTTTTTGGTCAAGATAATTACCGTGGAAGATCCTAGGTGGCAGCAAATCCCAGGTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS CAA 90 bp | TGGATTGTTGCCTTAGCTGTGACCTCTTGTCCGACGAGCATGCACTaGTGTTGTAGACAGCTGGAAGGTACATGTTGGATTTTTACACTG | + |
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Preference number: 6 (lower is better) Translates to: WIVALAVTSCPTSMH*CCRQLEGTCWIFTL Trigger: CAGTGTAAAAATCCAACATGTACCTTCCAGCTGTCTACAACACAAGTGCATGCTCGTCGGACAAGAGGTCACAGCTAAGGCAACAATCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS CAA 90 bp | GTGATACATCCGGCAAAGGAGATGGTTTTATCCCTAGATCCTAAGTaGGCCAACACTTTTGGAGAGATGACTGAGGTGAAGAGGATGTCC | + |
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Preference number: 6 (lower is better) Translates to: VIHPAKEMVLSLDPK*ANTFGEMTEVKRMS Trigger: GGACATCCTCTTCACCTCAGTCATCTCTCCAAAAGTGTTGGCCAACTTAGGATCTAGGGATAAAACCATCTCCTTTGCCGGATGTATCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS TCA 72 bp | TTCCACTTGCAGAAGGAATGCGCACTATGGTCAAGATaGTGTACGTATAGGAATAGGCCACGAGGACTATGC | + |
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Preference number: 6 (lower is better) Translates to: FHLQKECALWSR*CTYRNRPRGLC Trigger: GCATAGTCCTCGTGGCCTATTCCTATACGTACATCATCTTGACCATAGTGCGCATTCCTTCTGCAAGTGGAA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS CAA 72 bp | CCGGCAAAGGAGATGGTTTTATCCCTAGATCCTAAGTaGGCCAACACTTTTGGAGAGATGACTGAGGTGAAG | + |
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Preference number: 6 (lower is better) Translates to: PAKEMVLSLDPK*ANTFGEMTEVK Trigger: CTTCACCTCAGTCATCTCTCCAAAAGTGTTGGCCAACTTAGGATCTAGGGATAAAACCATCTCCTTTGCCGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS CAA 72 bp | AATGGAGTCACCACACTGCTCAGAACCAAAGGGATCTaGTTGATCTCCAGATATTCTTTCTGGGAGGGAGTC | + |
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Preference number: 6 (lower is better) Translates to: NGVTTLLRTKGI*LISRYSFWEGV Trigger: GACTCCCTCCCAGAAAGAATATCTGGAGATCAACAAGATCCCTTTGGTTCTGAGCAGTGTGGTGACTCCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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| CDS CAA 72 bp | ATTTGCTGCCACCTAGGATCTTCCACGGTAATTATCTaGACCAAAAAGCCACAGTGCATTCCACATGAGAGC | + |
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Preference number: 6 (lower is better) Translates to: ICCHLGSSTVII*TKKPQCIPHES Trigger: GCTCTCATGTGGAATGCACTGTGGCTTTTTGGTCAAGATAATTACCGTGGAAGATCCTAGGTGGCAGCAAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000540461.2 |
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