RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OR6C75 (Homo sapiens)

Ensembl gene IDs: ENSG00000187857

Ensembl transcript IDs: ENST00000641576.1

Found 66 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CAA 90 bp TCTCTCTCTTGCCTGATTGCTCTGGCTAGGGCTTTCAGTACTATGTaGAATAGGAGTGCTGAGAGGGGACATCCTTGTCTTGTTCCAGTT +
Preference number: 2 (lower is better)
Translates to: SLSCLIALARAFSTM*NRSAERGHPCLVPV
Trigger: AACTGGAACAAGACAAGGATGTCCCCTCTCAGCACTCCTATTCAACATAGTACTGAAAGCCCTAGCCAGAGCAATCAGGCAAGAGAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641576.1
3UTR-3UTR GCA 90 bp ACATCCTTGTCTTGTTCCAGTTCTCAGGAAGAATGCATACAACTTTTGCTAGTTTGTATACATGTGCCATaGTGGTGCGCTGCACCCACT +
Preference number: 2 (lower is better)
Translates to: TSLSCSSSQEECIQLLLVCIHVP*WCAAPT
Trigger: AGTGGGTGCAGCGCACCAGCATGGCACATGTATACA...AACTAGCAAAAGTTGTATGCATTCTTCCTGAGAACTGGAACAAGACAAGGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641576.1
3UTR-3UTR TCA 90 bp CTAAAATCCATTTATCCTGTATCTAGTCAGATTCATAGCTACTGTCCCAAGACATTTCTCTCTCTTGCCTaGTTGCTCTGGCTAGGGCTT +
Preference number: 2 (lower is better)
Translates to: LKSIYPVSSQIHSYCPKTFLSLA*LLWLGL
Trigger: AAGCCCTAGCCAGAGCAATCAGGCAAGAGAGAGAAA...TGTCTTGGGACAGTAGCTATGAATCTGACTAGATACAGGATAAATGGATTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641576.1
3UTR-3UTR GCA 90 bp ACATCCTTGTCTTGTTCCAGTTCTCAGGAAGAATGCATACAACTTTTGCTAGTTACATATGTATACATGTaGCATGCTGGTGCGCTGCAC +
Preference number: 2 (lower is better)
Translates to: TSLSCSSSQEECIQLLLVTYVYM*HAGALH
Trigger: GTGCAGCGCACCAGCATGGCACATGTATACATATGT...AACTAGCAAAAGTTGTATGCATTCTTCCTGAGAACTGGAACAAGACAAGGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641576.1
3UTR-3UTR GCA 90 bp CTAAAATCCATTTATCCTGTATCTAGTCAGATTCATAGCTACTGTCCCAAGACATGTACTCAAGTAATTTaGCTGCCTTGGCCTCCCAAA +
Preference number: 2 (lower is better)
Translates to: LKSIYPVSSQIHSYCPKTCTQVI*LPWPPK
Trigger: TTTGGGAGGCCAAGGCAGGCAAATTACTTGAGTACA...TGTCTTGGGACAGTAGCTATGAATCTGACTAGATACAGGATAAATGGATTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641576.1
3UTR-3UTR CCA 90 bp ACATCCTTGTCTTGTTCCAGTTCTCAGGAAGAATGCATACAACTTTTGCTAGTTTGGGTCTGTCACAGATaGCTGTTATTATTTTGGGCT +
Preference number: 2 (lower is better)
Translates to: TSLSCSSSQEECIQLLLVWVCHR*LLLFWA
Trigger: AGCCCAAAATAATAACAGCCATCTGTGACAGACCCA...AACTAGCAAAAGTTGTATGCATTCTTCCTGAGAACTGGAACAAGACAAGGATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641576.1
3UTR CAA 90 bp ATTATGATATTGGCTGTGGGTCTGTCACAGATGGCTGTTATTATTTaGGGCTATTTTCCTTCAATGCGTGGTTTGTTGAGTGTTTTTGTC +
Preference number: 2 (lower is better)
Translates to: IMILAVGLSQMAVII*GYFPSMRGLLSVFV
Trigger: GACAAAAACACTCAACAAACCACGCATTGAAGGAAAATAGCCCAAAATAATAACAGCCATCTGTGACAGACCCACAGCCAATATCATAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641576.1
3UTR-3UTR GCA 90 bp CACGTCATCATTCGCCGAATACCTTATAAAAGGGCAGTATCACACCATTGTAGATACATGTGCACATTGTaGAGGTTAGTTACATATGTA +
Preference number: 2 (lower is better)
Translates to: HVIIRRIPYKRAVSHHCRYMCTL*RLVTYV
Trigger: TACATATGTAACTAACCTGCACAATGTGCACATGTA...TCTACAATGGTGTGATACTGCCCTTTTATAAGGTATTCGGCGAATGATGACGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641576.1
3UTR-3UTR GCA 90 bp ACATCCTTGTCTTGTTCCAGTTCTCAGGAAGAATGCATACAACTTTTGCTAGTTAGGTATATCTCCCAATaGTATCCCTCAATAAACCAT +
Preference number: 2 (lower is better)
Translates to: TSLSCSSSQEECIQLLLVRYISQ*YPSINH
Trigger: ATGGTTTATTGAGGGATAGCATTGGGAGATATACCT...AACTAGCAAAAGTTGTATGCATTCTTCCTGAGAACTGGAACAAGACAAGGATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641576.1
3UTR-3UTR CCA 90 bp ACATCCTTGTCTTGTTCCAGTTCTCAGGAAGAATGCATACAACTTTTGCTAGTTTTTTCCTTCAATGCGTaGTTTGTTGAGTGTTTTTGT +
Preference number: 2 (lower is better)
Translates to: TSLSCSSSQEECIQLLLVFSFNA*FVECFC
Trigger: ACAAAAACACTCAACAAACCACGCATTGAAGGAAAA...AACTAGCAAAAGTTGTATGCATTCTTCCTGAGAACTGGAACAAGACAAGGATGT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000641576.1
3UTR-3UTR CCA 90 bp ACATCCTTGTCTTGTTCCAGTTCTCAGGAAGAATGCATACAACTTTTGCTAGTTTGGCTGTTATTATTTTaGGCTATTTTCCTTCAATGC +
Preference number: 2 (lower is better)
Translates to: TSLSCSSSQEECIQLLLVWLLLF*AIFLQC
Trigger: GCATTGAAGGAAAATAGCCCAAAATAATAACAGCCA...AACTAGCAAAAGTTGTATGCATTCTTCCTGAGAACTGGAACAAGACAAGGATGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000641576.1
3UTR-3UTR CCA 90 bp CTAAAATCCATTTATCCTGTATCTAGTCAGATTCATAGCTACTGTCCCAAGACATTTCTTAATGATACATaGGAGTTGAGGGACTCATTA +
Preference number: 2 (lower is better)
Translates to: LKSIYPVSSQIHSYCPKTFLNDT*ELRDSL
Trigger: TAATGAGTCCCTCAACTCCCATGTATCATTAAGAAA...TGTCTTGGGACAGTAGCTATGAATCTGACTAGATACAGGATAAATGGATTTTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641576.1
3UTR GCA 72 bp TGCACATTGTGCAGGTTAGTTACATATGTATACATGTaGCATGCTGGTGCGCTGCACCCACTAACTCGTCAT +
Preference number: 3 (lower is better)
Translates to: CTLCRLVTYVYM*HAGALHPLTRH
Trigger: ATGACGAGTTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641576.1
3UTR GCA 72 bp GGGACATCCTTGTCTTGTTCCAGTTCTCAGGAAGAATaGATACAACTTTTGCTAGTTTATTATGATATTGGC +
Preference number: 3 (lower is better)
Translates to: GTSLSCSSSQEE*IQLLLVYYDIG
Trigger: GCCAATATCATAATAAACTAGCAAAAGTTGTATGCATTCTTCCTGAGAACTGGAACAAGACAAGGATGTCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641576.1
3UTR-3UTR CAA 90 bp CTAAAATCCATTTATCCTGTATCTAGTCAGATTCATAGCTACTGTCCCAAGACACCTTCAATGCGTGGTTaGTTGAGTGTTTTTGTCATA +
Preference number: 3 (lower is better)
Translates to: LKSIYPVSSQIHSYCPKTPSMRG*LSVFVI
Trigger: TATGACAAAAACACTCAACAAACCACGCATTGAAGG...TGTCTTGGGACAGTAGCTATGAATCTGACTAGATACAGGATAAATGGATTTTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641576.1
3UTR-3UTR CAA 90 bp CTAAAATCCATTTATCCTGTATCTAGTCAGATTCATAGCTACTGTCCCAAGACAAATGATACATGGGAGTaGAGGGACTCATTAACTATA +
Preference number: 3 (lower is better)
Translates to: LKSIYPVSSQIHSYCPKTNDTWE*RDSLTI
Trigger: TATAGTTAATGAGTCCCTCAACTCCCATGTATCATT...TGTCTTGGGACAGTAGCTATGAATCTGACTAGATACAGGATAAATGGATTTTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641576.1
CDS-3UTR GCA 90 bp CACGTCATCATTCGCCGAATACCTTATAAAAGGGCAGTATCACACCATTGTAGACATGTGCCATGCTGGTaGGCTGCACCCACTAACTCG +
Preference number: 4 (lower is better)
Translates to: HVIIRRIPYKRAVSHHCRHVPCW*AAPTNS
Trigger: CGAGTTAGTGGGTGCAGCGCACCAGCATGGCACATG...TCTACAATGGTGTGATACTGCCCTTTTATAAGGTATTCGGCGAATGATGACGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641576.1
3UTR CAA 72 bp TGCCTGATTGCTCTGGCTAGGGCTTTCAGTACTATGTaGAATAGGAGTGCTGAGAGGGGACATCCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: CLIALARAFSTM*NRSAERGHPCL
Trigger: AAGACAAGGATGTCCCCTCTCAGCACTCCTATTCAACATAGTACTGAAAGCCCTAGCCAGAGCAATCAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641576.1
CDS-3UTR CCA 90 bp CACGTCATCATTCGCCGAATACCTTATAAAAGGGCAGTATCACACCATTGTAGAGCAGTGGTGCAATCTTaGCTCACTGTAGCCTCCACC +
Preference number: 4 (lower is better)
Translates to: HVIIRRIPYKRAVSHHCRAVVQS*LTVAST
Trigger: GGTGGAGGCTACAGTGAGCCAAGATTGCACCACTGC...TCTACAATGGTGTGATACTGCCCTTTTATAAGGTATTCGGCGAATGATGACGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641576.1
CDS-3UTR TCA 90 bp CACGTCATCATTCGCCGAATACCTTATAAAAGGGCAGTATCACACCATTGTAGATTTCTCTCTCTTGCCTaGTTGCTCTGGCTAGGGCTT +
Preference number: 4 (lower is better)
Translates to: HVIIRRIPYKRAVSHHCRFLSLA*LLWLGL
Trigger: AAGCCCTAGCCAGAGCAATCAGGCAAGAGAGAGAAA...TCTACAATGGTGTGATACTGCCCTTTTATAAGGTATTCGGCGAATGATGACGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641576.1
CDS-3UTR TCA 90 bp ACATCCTTGTCTTGTTCCAGTTCTCAGGAAGAATGCATACAACTTTTGCTAGTTCCCACCTCATCTTCTTaGGTAGCTGGGACCACAGGT +
Preference number: 4 (lower is better)
Translates to: TSLSCSSSQEECIQLLLVPTSSS*VAGTTG
Trigger: ACCTGTGGTCCCAGCTACTCAAGAAGATGAGGTGGG...AACTAGCAAAAGTTGTATGCATTCTTCCTGAGAACTGGAACAAGACAAGGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641576.1
CDS-3UTR GCA 90 bp ACATCCTTGTCTTGTTCCAGTTCTCAGGAAGAATGCATACAACTTTTGCTAGTTTTGTCCAGGGTGGAGTaGAGTGGCATGATGAGAGCT +
Preference number: 4 (lower is better)
Translates to: TSLSCSSSQEECIQLLLVLSRVE*SGMMRA
Trigger: AGCTCTCATCATGCCACTGCACTCCACCCTGGACAA...AACTAGCAAAAGTTGTATGCATTCTTCCTGAGAACTGGAACAAGACAAGGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641576.1
CDS-3UTR CCA 90 bp AGGTGTTTAGAAAGAGTTCATGTAGAGAAGGGTAGAGAGTTTTTCATTCAGCTTCAGGGTGGAGTGCAGTaGCATGATGAGAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: RCLERVHVEKGREFFIQLQGGVQ*HDESSL
Trigger: CAGTGAGCTCTCATCATGCCACTGCACTCCACCCTG...AAGCTGAATGAAAAACTCTCTACCCTTCTCTACATGAACTCTTTCTAAACACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641576.1
CDS-3UTR TCA 90 bp AGGTGTTTAGAAAGAGTTCATGTAGAGAAGGGTAGAGAGTTTTTCATTCAGCTTCAAGAGAGGAGCCACTaGGGTATTGAGCACAGCTAC +
Preference number: 4 (lower is better)
Translates to: RCLERVHVEKGREFFIQLQERSH*GIEHSY
Trigger: GTAGCTGTGCTCAATACCTCAGTGGCTCCTCTCTTG...AAGCTGAATGAAAAACTCTCTACCCTTCTCTACATGAACTCTTTCTAAACACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641576.1
CDS-3UTR GCA 90 bp CACGTCATCATTCGCCGAATACCTTATAAAAGGGCAGTATCACACCATTGTAGAGCACAGAAATCCAACTaGAGCAGAAGCATTACTGGT +
Preference number: 4 (lower is better)
Translates to: HVIIRRIPYKRAVSHHCRAQKSN*SRSITG
Trigger: ACCAGTAATGCTTCTGCTGCAGTTGGATTTCTGTGC...TCTACAATGGTGTGATACTGCCCTTTTATAAGGTATTCGGCGAATGATGACGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641576.1
CDS-3UTR GCA 90 bp AGGTGTTTAGAAAGAGTTCATGTAGAGAAGGGTAGAGAGTTTTTCATTCAGCTTTGTATACATGTGCCATaGTGGTGCGCTGCACCCACT +
Preference number: 4 (lower is better)
Translates to: RCLERVHVEKGREFFIQLCIHVP*WCAAPT
Trigger: AGTGGGTGCAGCGCACCAGCATGGCACATGTATACA...AAGCTGAATGAAAAACTCTCTACCCTTCTCTACATGAACTCTTTCTAAACACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641576.1
CDS-3UTR TCA 90 bp CTAAAATCCATTTATCCTGTATCTAGTCAGATTCATAGCTACTGTCCCAAGACATCTGGACCATGCTCTTaGAGGCTTGCTTCACTTGCT +
Preference number: 4 (lower is better)
Translates to: LKSIYPVSSQIHSYCPKTSGPCS*RLASLA
Trigger: AGCAAGTGAAGCAAGCCTTCAAGAGCATGGTCCAGA...TGTCTTGGGACAGTAGCTATGAATCTGACTAGATACAGGATAAATGGATTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641576.1
CDS-3UTR GCA 90 bp ACATCCTTGTCTTGTTCCAGTTCTCAGGAAGAATGCATACAACTTTTGCTAGTTTGTAATGAAGAGGTTTaGAGATGGCCATGCAGCGGT +
Preference number: 4 (lower is better)
Translates to: TSLSCSSSQEECIQLLLVCNEEV*RWPCSG
Trigger: ACCGCTGCATGGCCATCTGCAAACCTCTTCATTACA...AACTAGCAAAAGTTGTATGCATTCTTCCTGAGAACTGGAACAAGACAAGGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641576.1
CDS-3UTR GCA 90 bp CTAAAATCCATTTATCCTGTATCTAGTCAGATTCATAGCTACTGTCCCAAGACAATGATGAGAGCTCACTaGAGCCTCAACCTCCAAGGT +
Preference number: 4 (lower is better)
Translates to: LKSIYPVSSQIHSYCPKTMMRAH*SLNLQG
Trigger: ACCTTGGAGGTTGAGGCTGCAGTGAGCTCTCATCAT...TGTCTTGGGACAGTAGCTATGAATCTGACTAGATACAGGATAAATGGATTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641576.1
CDS-3UTR CCA 90 bp CACGTCATCATTCGCCGAATACCTTATAAAAGGGCAGTATCACACCATTGTAGAAGAGAGCTGCAGCATTaGAGAAGAGTCACAGATAAA +
Preference number: 4 (lower is better)
Translates to: HVIIRRIPYKRAVSHHCRRELQH*RRVTDK
Trigger: TTTATCTGTGACTCTTCTCCAATGCTGCAGCTCTCT...TCTACAATGGTGTGATACTGCCCTTTTATAAGGTATTCGGCGAATGATGACGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641576.1
CDS-3UTR GCA 90 bp CTAAAATCCATTTATCCTGTATCTAGTCAGATTCATAGCTACTGTCCCAAGACAACATATGTATACATGTaGCATGCTGGTGCGCTGCAC +
Preference number: 4 (lower is better)
Translates to: LKSIYPVSSQIHSYCPKTTYVYM*HAGALH
Trigger: GTGCAGCGCACCAGCATGGCACATGTATACATATGT...TGTCTTGGGACAGTAGCTATGAATCTGACTAGATACAGGATAAATGGATTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641576.1
CDS-3UTR GCA 90 bp ACATCCTTGTCTTGTTCCAGTTCTCAGGAAGAATGCATACAACTTTTGCTAGTTTTCATTTCTCTCTCTTaGCTGATTGCTCTGGCTAGG +
Preference number: 4 (lower is better)
Translates to: TSLSCSSSQEECIQLLLVFISLS*LIALAR
Trigger: CCTAGCCAGAGCAATCAGGCAAGAGAGAGAAATGAA...AACTAGCAAAAGTTGTATGCATTCTTCCTGAGAACTGGAACAAGACAAGGATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641576.1
CDS-3UTR GCA 90 bp ACATCCTTGTCTTGTTCCAGTTCTCAGGAAGAATGCATACAACTTTTGCTAGTTTGTACTCAAGTAATTTaGCTGCCTTGGCCTCCCAAA +
Preference number: 4 (lower is better)
Translates to: TSLSCSSSQEECIQLLLVCTQVI*LPWPPK
Trigger: TTTGGGAGGCCAAGGCAGGCAAATTACTTGAGTACA...AACTAGCAAAAGTTGTATGCATTCTTCCTGAGAACTGGAACAAGACAAGGATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641576.1
CDS-3UTR TCA 90 bp CACGTCATCATTCGCCGAATACCTTATAAAAGGGCAGTATCACACCATTGTAGATGTCTAGCTATCCGCTaGTGCATCTATCTTATAAAT +
Preference number: 4 (lower is better)
Translates to: HVIIRRIPYKRAVSHHCRCLAIR*CIYLIN
Trigger: ATTTATAAGATAGATGCATCAGCGGATAGCTAGACA...TCTACAATGGTGTGATACTGCCCTTTTATAAGGTATTCGGCGAATGATGACGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641576.1
CDS-3UTR TCA 90 bp ACATCCTTGTCTTGTTCCAGTTCTCAGGAAGAATGCATACAACTTTTGCTAGTTATGAGTTCTAGAAAGTaGGTGTTTGTGCAAGAGAGC +
Preference number: 4 (lower is better)
Translates to: TSLSCSSSQEECIQLLLVMSSRK*VFVQES
Trigger: GCTCTCTTGCACAAACACTCACTTTCTAGAACTCAT...AACTAGCAAAAGTTGTATGCATTCTTCCTGAGAACTGGAACAAGACAAGGATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641576.1
CDS-3UTR TCA 90 bp AGGTGTTTAGAAAGAGTTCATGTAGAGAAGGGTAGAGAGTTTTTCATTCAGCTTAGGTGCATGCCAGCGTaGCCAGCTAATTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: RCLERVHVEKGREFFIQLRCMPA*PANFCI
Trigger: AATACAAAAATTAGCTGGTCACGCTGGCATGCACCT...AAGCTGAATGAAAAACTCTCTACCCTTCTCTACATGAACTCTTTCTAAACACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000641576.1
CDS-3UTR GCA 90 bp CTAAAATCCATTTATCCTGTATCTAGTCAGATTCATAGCTACTGTCCCAAGACATTTGTGCAAGAGAGCTaGAGCATTGGAGAAGAGTCA +
Preference number: 4 (lower is better)
Translates to: LKSIYPVSSQIHSYCPKTFVQES*SIGEES
Trigger: TGACTCTTCTCCAATGCTGCAGCTCTCTTGCACAAA...TGTCTTGGGACAGTAGCTATGAATCTGACTAGATACAGGATAAATGGATTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641576.1
CDS-3UTR TCA 90 bp ACATCCTTGTCTTGTTCCAGTTCTCAGGAAGAATGCATACAACTTTTGCTAGTTGGTGAATTATCTTTTTaGTGTGCTGCTGGATTCAAC +
Preference number: 4 (lower is better)
Translates to: TSLSCSSSQEECIQLLLVGELSF*CAAGFN
Trigger: GTTGAATCCAGCAGCACATCAAAAAGATAATTCACC...AACTAGCAAAAGTTGTATGCATTCTTCCTGAGAACTGGAACAAGACAAGGATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641576.1
CDS-3UTR TCA 90 bp CTAAAATCCATTTATCCTGTATCTAGTCAGATTCATAGCTACTGTCCCAAGACAGAAATAGACAAGTGCTaGAGGACGCTCACATCTATA +
Preference number: 4 (lower is better)
Translates to: LKSIYPVSSQIHSYCPKTEIDKC*RTLTSI
Trigger: TATAGATGTGAGCGTCCTTCAGCACTTGTCTATTTC...TGTCTTGGGACAGTAGCTATGAATCTGACTAGATACAGGATAAATGGATTTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641576.1
CDS-3UTR GCA 90 bp CACGTCATCATTCGCCGAATACCTTATAAAAGGGCAGTATCACACCATTGTAGAATTATCTTTTTGATGTaGTGCTGGATTCAACAACCA +
Preference number: 4 (lower is better)
Translates to: HVIIRRIPYKRAVSHHCRIIFLM*CWIQQP
Trigger: TGGTTGTTGAATCCAGCAGCACATCAAAAAGATAAT...TCTACAATGGTGTGATACTGCCCTTTTATAAGGTATTCGGCGAATGATGACGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641576.1
CDS-3UTR CCA 90 bp AGGTGTTTAGAAAGAGTTCATGTAGAGAAGGGTAGAGAGTTTTTCATTCAGCTTCAGAAGCATTACTGGTaGAAAGATGATCAGAAACCC +
Preference number: 4 (lower is better)
Translates to: RCLERVHVEKGREFFIQLQKHYW*KDDQKP
Trigger: GGGTTTCTGATCATCTTTCCACCAGTAATGCTTCTG...AAGCTGAATGAAAAACTCTCTACCCTTCTCTACATGAACTCTTTCTAAACACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641576.1
CDS-3UTR CCA 90 bp AGGTGTTTAGAAAGAGTTCATGTAGAGAAGGGTAGAGAGTTTTTCATTCAGCTTTGGGTCTGTCACAGATaGCTGTTATTATTTTGGGCT +
Preference number: 4 (lower is better)
Translates to: RCLERVHVEKGREFFIQLWVCHR*LLLFWA
Trigger: AGCCCAAAATAATAACAGCCATCTGTGACAGACCCA...AAGCTGAATGAAAAACTCTCTACCCTTCTCTACATGAACTCTTTCTAAACACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641576.1
CDS-3UTR CCA 90 bp CACGTCATCATTCGCCGAATACCTTATAAAAGGGCAGTATCACACCATTGTAGACAGCTTGAATGTTATTaGTGTATAGAAATGCTACTG +
Preference number: 4 (lower is better)
Translates to: HVIIRRIPYKRAVSHHCRQLECY*CIEMLL
Trigger: CAGTAGCATTTCTATACACCAATAACATTCAAGCTG...TCTACAATGGTGTGATACTGCCCTTTTATAAGGTATTCGGCGAATGATGACGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641576.1
3UTR CAA 72 bp TCTTGTTCCAGTTCTCAGGAAGAATGCATACAACTTTaGCTAGTTTATTATGATATTGGCTGTGGGTCTGTC +
Preference number: 4 (lower is better)
Translates to: SCSSSQEECIQL*LVYYDIGCGSV
Trigger: GACAGACCCACAGCCAATATCATAATAAACTAGCAAAAGTTGTATGCATTCTTCCTGAGAACTGGAACAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641576.1
CDS-3UTR TCA 90 bp ACATCCTTGTCTTGTTCCAGTTCTCAGGAAGAATGCATACAACTTTTGCTAGTTTTTGCTAGTTTATTATaGTATTGGCTGTGGGTCTGT +
Preference number: 4 (lower is better)
Translates to: TSLSCSSSQEECIQLLLVFASLL*YWLWVC
Trigger: ACAGACCCACAGCCAATATCATAATAAACTAGCAAA...AACTAGCAAAAGTTGTATGCATTCTTCCTGAGAACTGGAACAAGACAAGGATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641576.1
CDS-3UTR GCA 90 bp ACATCCTTGTCTTGTTCCAGTTCTCAGGAAGAATGCATACAACTTTTGCTAGTTGTTTTAAGGTACATGTaGACATTGTGCAGGTTAGTT +
Preference number: 4 (lower is better)
Translates to: TSLSCSSSQEECIQLLLVVLRYM*TLCRLV
Trigger: AACTAACCTGCACAATGTGCACATGTACCTTAAAAC...AACTAGCAAAAGTTGTATGCATTCTTCCTGAGAACTGGAACAAGACAAGGATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641576.1
CDS-3UTR GCA 90 bp CTAAAATCCATTTATCCTGTATCTAGTCAGATTCATAGCTACTGTCCCAAGACACACTTAGTTAACGTTTaGATGTTGTTTCCACACTCC +
Preference number: 4 (lower is better)
Translates to: LKSIYPVSSQIHSYCPKTHLVNV*MLFPHS
Trigger: GGAGTGTGGAAACAACATGCAAACGTTAACTAAGTG...TGTCTTGGGACAGTAGCTATGAATCTGACTAGATACAGGATAAATGGATTTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641576.1
CDS-3UTR CCA 90 bp CTAAAATCCATTTATCCTGTATCTAGTCAGATTCATAGCTACTGTCCCAAGACACAGCAGAAGCATTACTaGTGGAAAGATGATCAGAAA +
Preference number: 4 (lower is better)
Translates to: LKSIYPVSSQIHSYCPKTQQKHY*WKDDQK
Trigger: TTTCTGATCATCTTTCCACCAGTAATGCTTCTGCTG...TGTCTTGGGACAGTAGCTATGAATCTGACTAGATACAGGATAAATGGATTTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641576.1
CDS-3UTR TCA 90 bp AGGTGTTTAGAAAGAGTTCATGTAGAGAAGGGTAGAGAGTTTTTCATTCAGCTTTATCTCCTTCTTTTATaGGGCTGGATAACATTCCAT +
Preference number: 4 (lower is better)
Translates to: RCLERVHVEKGREFFIQLYLLLL*GWITFH
Trigger: ATGGAATGTTATCCAGCCTCATAAAAGAAGGAGATA...AAGCTGAATGAAAAACTCTCTACCCTTCTCTACATGAACTCTTTCTAAACACCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641576.1
CDS-3UTR TCA 90 bp CTAAAATCCATTTATCCTGTATCTAGTCAGATTCATAGCTACTGTCCCAAGACATTGTTTCCACACTCCTaGTTTTCACTTTTGCATTTC +
Preference number: 4 (lower is better)
Translates to: LKSIYPVSSQIHSYCPKTLFPHS*FSLLHF
Trigger: GAAATGCAAAAGTGAAAATCAGGAGTGTGGAAACAA...TGTCTTGGGACAGTAGCTATGAATCTGACTAGATACAGGATAAATGGATTTTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000641576.1
CDS-3UTR GCA 90 bp AGGTGTTTAGAAAGAGTTCATGTAGAGAAGGGTAGAGAGTTTTTCATTCAGCTTAGGTATATCTCCCAATaGTATCCCTCAATAAACCAT +
Preference number: 4 (lower is better)
Translates to: RCLERVHVEKGREFFIQLRYISQ*YPSINH
Trigger: ATGGTTTATTGAGGGATAGCATTGGGAGATATACCT...AAGCTGAATGAAAAACTCTCTACCCTTCTCTACATGAACTCTTTCTAAACACCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641576.1
CDS-3UTR GCA 90 bp AGGTGTTTAGAAAGAGTTCATGTAGAGAAGGGTAGAGAGTTTTTCATTCAGCTTTTTTTCATTCAGCTTTaGCTTTGGGGGTACATTTTT +
Preference number: 4 (lower is better)
Translates to: RCLERVHVEKGREFFIQLFFIQL*LWGYIF
Trigger: AAAAATGTACCCCCAAAGGCAAAGCTGAATGAAAAA...AAGCTGAATGAAAAACTCTCTACCCTTCTCTACATGAACTCTTTCTAAACACCT
36% GC, longest homopolymer 7 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000641576.1
CDS-3UTR GCA 90 bp AGGTGTTTAGAAAGAGTTCATGTAGAGAAGGGTAGAGAGTTTTTCATTCAGCTTAGTTCTCAGGAAGAATaGATACAACTTTTGCTAGTT +
Preference number: 4 (lower is better)
Translates to: RCLERVHVEKGREFFIQLSSQEE*IQLLLV
Trigger: AACTAGCAAAAGTTGTATGCATTCTTCCTGAGAACT...AAGCTGAATGAAAAACTCTCTACCCTTCTCTACATGAACTCTTTCTAAACACCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641576.1
CDS-3UTR CCA 90 bp CTAAAATCCATTTATCCTGTATCTAGTCAGATTCATAGCTACTGTCCCAAGACATGGCTGTTATTATTTTaGGCTATTTTCCTTCAATGC +
Preference number: 4 (lower is better)
Translates to: LKSIYPVSSQIHSYCPKTWLLLF*AIFLQC
Trigger: GCATTGAAGGAAAATAGCCCAAAATAATAACAGCCA...TGTCTTGGGACAGTAGCTATGAATCTGACTAGATACAGGATAAATGGATTTTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000641576.1
CDS-3UTR CAA 90 bp CACGTCATCATTCGCCGAATACCTTATAAAAGGGCAGTATCACACCATTGTAGATGCAGTGGTGCAATCTaGGCTCACTGTAGCCTCCAC +
Preference number: 5 (lower is better)
Translates to: HVIIRRIPYKRAVSHHCRCSGAI*AHCSLH
Trigger: GTGGAGGCTACAGTGAGCCAAGATTGCACCACTGCA...TCTACAATGGTGTGATACTGCCCTTTTATAAGGTATTCGGCGAATGATGACGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641576.1
CDS-3UTR CAA 90 bp ACATCCTTGTCTTGTTCCAGTTCTCAGGAAGAATGCATACAACTTTTGCTAGTTCTAGAAAGTGAGTGTTaGTGCAAGAGAGCTGCAGCA +
Preference number: 5 (lower is better)
Translates to: TSLSCSSSQEECIQLLLVLESEC*CKRAAA
Trigger: TGCTGCAGCTCTCTTGCACAAACACTCACTTTCTAG...AACTAGCAAAAGTTGTATGCATTCTTCCTGAGAACTGGAACAAGACAAGGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641576.1
CDS-3UTR CAA 90 bp AGGTGTTTAGAAAGAGTTCATGTAGAGAAGGGTAGAGAGTTTTTCATTCAGCTTTTCTGGACCATGCTCTaGAAGGCTTGCTTCACTTGC +
Preference number: 5 (lower is better)
Translates to: RCLERVHVEKGREFFIQLFWTML*KACFTC
Trigger: GCAAGTGAAGCAAGCCTTCAAGAGCATGGTCCAGAA...AAGCTGAATGAAAAACTCTCTACCCTTCTCTACATGAACTCTTTCTAAACACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641576.1
CDS-3UTR CAA 90 bp CACGTCATCATTCGCCGAATACCTTATAAAAGGGCAGTATCACACCATTGTAGATATGTTAAACCATCCTaGCATCCAGGTTTAAAGCCC +
Preference number: 5 (lower is better)
Translates to: HVIIRRIPYKRAVSHHCRYVKPS*HPGLKP
Trigger: GGGCTTTAAACCTGGATGCAAGGATGGTTTAACATA...TCTACAATGGTGTGATACTGCCCTTTTATAAGGTATTCGGCGAATGATGACGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641576.1
CDS-3UTR CAA 90 bp AGGTGTTTAGAAAGAGTTCATGTAGAGAAGGGTAGAGAGTTTTTCATTCAGCTTGGGGACATCCTTGTCTaGTTCCAGTTCTCAGGAAGA +
Preference number: 5 (lower is better)
Translates to: RCLERVHVEKGREFFIQLGDILV*FQFSGR
Trigger: TCTTCCTGAGAACTGGAACAAGACAAGGATGTCCCC...AAGCTGAATGAAAAACTCTCTACCCTTCTCTACATGAACTCTTTCTAAACACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641576.1
CDS-3UTR CAA 90 bp AGGTGTTTAGAAAGAGTTCATGTAGAGAAGGGTAGAGAGTTTTTCATTCAGCTTTTGTACTCAAGTAATTaGCCTGCCTTGGCCTCCCAA +
Preference number: 5 (lower is better)
Translates to: RCLERVHVEKGREFFIQLLYSSN*PALASQ
Trigger: TTGGGAGGCCAAGGCAGGCAAATTACTTGAGTACAA...AAGCTGAATGAAAAACTCTCTACCCTTCTCTACATGAACTCTTTCTAAACACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641576.1
CDS-3UTR CAA 90 bp CACGTCATCATTCGCCGAATACCTTATAAAAGGGCAGTATCACACCATTGTAGATTGCTCAGACTTGTCTaGAACTCTTGTACTCAAGTA +
Preference number: 5 (lower is better)
Translates to: HVIIRRIPYKRAVSHHCRLLRLV*NSCTQV
Trigger: TACTTGAGTACAAGAGTTCAAGACAAGTCTGAGCAA...TCTACAATGGTGTGATACTGCCCTTTTATAAGGTATTCGGCGAATGATGACGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641576.1
CDS-3UTR CAA 90 bp ACATCCTTGTCTTGTTCCAGTTCTCAGGAAGAATGCATACAACTTTTGCTAGTTAGGCCTAGGAGTTTTTaGGAGGAACCTTTAAAGTTT +
Preference number: 5 (lower is better)
Translates to: TSLSCSSSQEECIQLLLVRPRSF*EEPLKF
Trigger: AAACTTTAAAGGTTCCTCCAAAAAACTCCTAGGCCT...AACTAGCAAAAGTTGTATGCATTCTTCCTGAGAACTGGAACAAGACAAGGATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641576.1
CDS-3UTR CAA 90 bp AGGTGTTTAGAAAGAGTTCATGTAGAGAAGGGTAGAGAGTTTTTCATTCAGCTTCCTTCAATGCGTGGTTaGTTGAGTGTTTTTGTCATA +
Preference number: 5 (lower is better)
Translates to: RCLERVHVEKGREFFIQLPSMRG*LSVFVI
Trigger: TATGACAAAAACACTCAACAAACCACGCATTGAAGG...AAGCTGAATGAAAAACTCTCTACCCTTCTCTACATGAACTCTTTCTAAACACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000641576.1
CDS-3UTR CAA 90 bp AGGTGTTTAGAAAGAGTTCATGTAGAGAAGGGTAGAGAGTTTTTCATTCAGCTTAATGATACATGGGAGTaGAGGGACTCATTAACTATA +
Preference number: 5 (lower is better)
Translates to: RCLERVHVEKGREFFIQLNDTWE*RDSLTI
Trigger: TATAGTTAATGAGTCCCTCAACTCCCATGTATCATT...AAGCTGAATGAAAAACTCTCTACCCTTCTCTACATGAACTCTTTCTAAACACCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641576.1
CDS-3UTR CAA 90 bp AGGTGTTTAGAAAGAGTTCATGTAGAGAAGGGTAGAGAGTTTTTCATTCAGCTTTCAATGCGTGGTTTGTaGAGTGTTTTTGTCATAAAG +
Preference number: 5 (lower is better)
Translates to: RCLERVHVEKGREFFIQLSMRGL*SVFVIK
Trigger: CTTTATGACAAAAACACTCAACAAACCACGCATTGA...AAGCTGAATGAAAAACTCTCTACCCTTCTCTACATGAACTCTTTCTAAACACCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000641576.1
CDS-3UTR CAA 90 bp CTAAAATCCATTTATCCTGTATCTAGTCAGATTCATAGCTACTGTCCCAAGACACGTGAGCCACCATGTTaGGACAACTTTTATTTATTT +
Preference number: 5 (lower is better)
Translates to: LKSIYPVSSQIHSYCPKTREPPC*DNFYLF
Trigger: AAATAAATAAAAGTTGTCCAAACATGGTGGCTCACG...TGTCTTGGGACAGTAGCTATGAATCTGACTAGATACAGGATAAATGGATTTTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641576.1