Pregenerated sensors for OR6C1 (Homo sapiens)
Ensembl gene IDs: ENSG00000205330Ensembl transcript IDs: ENST00000379668.3, ENST00000642104.1
Found 24 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | CAGAGAGAATATTATGGGATTCACAAATATGGAGCTCTACTTAGCACTTATAACAATGATGCAGAAGACTaGAAGGAGGCCATTTTGATT | + |
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Preference number: 2 (lower is better) Translates to: QREYYGIHKYGALLSTYNNDAED*KEAILI Trigger: AATCAAAATGGCCTCCTTGCAGTCTTCTGCATCATT...GTTATAAGTGCTAAGTAGAGCTCCATATTTGTGAATCCCATAATATTCTCTCTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000642104.1 |
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| CDS-3UTR GCA 90 bp | GCCATTTTGATTGAAGAAGCTACTGAAAATTCATATTGTCCTTTCCTGTGCCTCATGATACTCAAGCAATaGAGAGGCTTGCAGATGGCC | + |
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Preference number: 4 (lower is better) Translates to: AILIEEATENSYCPFLCLMILKQ*RGLQMA Trigger: GGCCATCTGCAAGCCTCTGCATTGCTTGAGTATCAT...GAGGCACAGGAAAGGACAATATGAATTTTCAGTAGCTTCTTCAATCAAAATGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000379668.3 ENST00000642104.1 |
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| CDS-3UTR TCA 90 bp | GCCATTTTGATTGAAGAAGCTACTGAAAATTCATATTGTCCTTTCCTGTGCCTCAAGGCCTTTGTCCTCTaGCTAGTAGAAGGAATTCTC | + |
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Preference number: 4 (lower is better) Translates to: AILIEEATENSYCPFLCLKAFVL*LVEGIL Trigger: GAGAATTCCTTCTACTAGTCAGAGGACAAAGGCCTT...GAGGCACAGGAAAGGACAATATGAATTTTCAGTAGCTTCTTCAATCAAAATGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000379668.3 ENST00000642104.1 |
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| CDS-3UTR GCA 90 bp | GCCATTTTGATTGAAGAAGCTACTGAAAATTCATATTGTCCTTTCCTGTGCCTCGTATTGCCACTCCCTTaGTCAAGGACACTCTATCTT | + |
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Preference number: 4 (lower is better) Translates to: AILIEEATENSYCPFLCLVLPLP*SRTLYL Trigger: AAGATAGAGTGTCCTTGAGCAAGGGAGTGGCAATAC...GAGGCACAGGAAAGGACAATATGAATTTTCAGTAGCTTCTTCAATCAAAATGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000379668.3 ENST00000642104.1 |
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| CDS-3UTR TCA 90 bp | GCCATTTTGATTGAAGAAGCTACTGAAAATTCATATTGTCCTTTCCTGTGCCTCAGACTCTTCGATTCATaGTACTCAAGCAATGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: AILIEEATENSYCPFLCLRLFDS*YSSNAE Trigger: CTCTGCATTGCTTGAGTATCATGAATCGAAGAGTCT...GAGGCACAGGAAAGGACAATATGAATTTTCAGTAGCTTCTTCAATCAAAATGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000379668.3 ENST00000642104.1 |
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| CDS-3UTR TCA 90 bp | GCCATTTTGATTGAAGAAGCTACTGAAAATTCATATTGTCCTTTCCTGTGCCTCGCAAGGAGGCCATTTTaGTTGAAGAAGCTACTGAAA | + |
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Preference number: 4 (lower is better) Translates to: AILIEEATENSYCPFLCLARRPF*LKKLLK Trigger: TTTCAGTAGCTTCTTCAATCAAAATGGCCTCCTTGC...GAGGCACAGGAAAGGACAATATGAATTTTCAGTAGCTTCTTCAATCAAAATGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000379668.3 ENST00000642104.1 |
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| CDS-3UTR TCA 90 bp | CAGAGAGAATATTATGGGATTCACAAATATGGAGCTCTACTTAGCACTTATAACCCCCTGCCAGACCTCTaGTTTTCATATAGTTTCACT | + |
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Preference number: 4 (lower is better) Translates to: QREYYGIHKYGALLSTYNPLPDL*FSYSFT Trigger: AGTGAAACTATATGAAAATCAGAGGTCTGGCAGGGG...GTTATAAGTGCTAAGTAGAGCTCCATATTTGTGAATCCCATAATATTCTCTCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000642104.1 |
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| CDS-3UTR GCA 90 bp | CAGAGAGAATATTATGGGATTCACAAATATGGAGCTCTACTTAGCACTTATAACGTATTGCCACTCCCTTaGTCAAGGACACTCTATCTT | + |
|
Preference number: 4 (lower is better) Translates to: QREYYGIHKYGALLSTYNVLPLP*SRTLYL Trigger: AAGATAGAGTGTCCTTGAGCAAGGGAGTGGCAATAC...GTTATAAGTGCTAAGTAGAGCTCCATATTTGTGAATCCCATAATATTCTCTCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642104.1 |
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| CDS-3UTR GCA 90 bp | GCCATTTTGATTGAAGAAGCTACTGAAAATTCATATTGTCCTTTCCTGTGCCTCAATGATGCAGAAGACTaGAAGGAGGCCATTTTGATT | + |
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Preference number: 4 (lower is better) Translates to: AILIEEATENSYCPFLCLNDAED*KEAILI Trigger: AATCAAAATGGCCTCCTTGCAGTCTTCTGCATCATT...GAGGCACAGGAAAGGACAATATGAATTTTCAGTAGCTTCTTCAATCAAAATGGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000642104.1 |
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| CDS-3UTR TCA 90 bp | CAGAGAGAATATTATGGGATTCACAAATATGGAGCTCTACTTAGCACTTATAACAGACTCTTCGATTCATaGTACTCAAGCAATGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: QREYYGIHKYGALLSTYNRLFDS*YSSNAE Trigger: CTCTGCATTGCTTGAGTATCATGAATCGAAGAGTCT...GTTATAAGTGCTAAGTAGAGCTCCATATTTGTGAATCCCATAATATTCTCTCTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642104.1 |
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| CDS-3UTR TCA 90 bp | GCCATTTTGATTGAAGAAGCTACTGAAAATTCATATTGTCCTTTCCTGTGCCTCCATTTCATGTGCTTGTaGAAAATACAGTCTTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: AILIEEATENSYCPFLCLHFMCL*KIQSSL Trigger: CAAGGAAGACTGTATTTTTCACAAGCACATGAAATG...GAGGCACAGGAAAGGACAATATGAATTTTCAGTAGCTTCTTCAATCAAAATGGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000379668.3 ENST00000642104.1 |
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| CDS-3UTR TCA 90 bp | CAGAGAGAATATTATGGGATTCACAAATATGGAGCTCTACTTAGCACTTATAACGCAAGGAGGCCATTTTaGTTGAAGAAGCTACTGAAA | + |
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Preference number: 4 (lower is better) Translates to: QREYYGIHKYGALLSTYNARRPF*LKKLLK Trigger: TTTCAGTAGCTTCTTCAATCAAAATGGCCTCCTTGC...GTTATAAGTGCTAAGTAGAGCTCCATATTTGTGAATCCCATAATATTCTCTCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000642104.1 |
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| CDS-3UTR GCA 90 bp | GCCATTTTGATTGAAGAAGCTACTGAAAATTCATATTGTCCTTTCCTGTGCCTCATTAGCAAATGCCATTaGTATCCAGTAAAACCAGGA | + |
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Preference number: 4 (lower is better) Translates to: AILIEEATENSYCPFLCLISKCH*YPVKPG Trigger: TCCTGGTTTTACTGGATAGCAATGGCATTTGCTAAT...GAGGCACAGGAAAGGACAATATGAATTTTCAGTAGCTTCTTCAATCAAAATGGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000642104.1 |
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| CDS-3UTR GCA 90 bp | GCCATTTTGATTGAAGAAGCTACTGAAAATTCATATTGTCCTTTCCTGTGCCTCAAATACAGTCTTCCTTaGCATGTTAATGAAAGCTTG | + |
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Preference number: 4 (lower is better) Translates to: AILIEEATENSYCPFLCLKYSLP*HVNESL Trigger: CAAGCTTTCATTAACATGGCAAGGAAGACTGTATTT...GAGGCACAGGAAAGGACAATATGAATTTTCAGTAGCTTCTTCAATCAAAATGGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000379668.3 ENST00000642104.1 |
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| CDS-3UTR CCA 90 bp | GCCATTTTGATTGAAGAAGCTACTGAAAATTCATATTGTCCTTTCCTGTGCCTCACAGAGAGAATATTATaGGATTCACAAATATGGAGC | + |
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Preference number: 4 (lower is better) Translates to: AILIEEATENSYCPFLCLTERIL*DSQIWS Trigger: GCTCCATATTTGTGAATCCCATAATATTCTCTCTGT...GAGGCACAGGAAAGGACAATATGAATTTTCAGTAGCTTCTTCAATCAAAATGGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000642104.1 |
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| CDS-3UTR TCA 90 bp | CAGAGAGAATATTATGGGATTCACAAATATGGAGCTCTACTTAGCACTTATAACCATTTCATGTGCTTGTaGAAAATACAGTCTTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: QREYYGIHKYGALLSTYNHFMCL*KIQSSL Trigger: CAAGGAAGACTGTATTTTTCACAAGCACATGAAATG...GTTATAAGTGCTAAGTAGAGCTCCATATTTGTGAATCCCATAATATTCTCTCTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000642104.1 |
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| CDS-3UTR CAA 90 bp | GCCATTTTGATTGAAGAAGCTACTGAAAATTCATATTGTCCTTTCCTGTGCCTCCTGAGGTGTTTAGTATaGCCACTCCCTTGCTCAAGG | + |
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Preference number: 5 (lower is better) Translates to: AILIEEATENSYCPFLCLLRCLV*PLPCSR Trigger: CCTTGAGCAAGGGAGTGGCAATACTAAACACCTCAG...GAGGCACAGGAAAGGACAATATGAATTTTCAGTAGCTTCTTCAATCAAAATGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000379668.3 ENST00000642104.1 |
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| CDS-3UTR CAA 90 bp | GCCATTTTGATTGAAGAAGCTACTGAAAATTCATATTGTCCTTTCCTGTGCCTCAGTATTGCCACTCCCTaGCTCAAGGACACTCTATCT | + |
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Preference number: 5 (lower is better) Translates to: AILIEEATENSYCPFLCLSIATP*LKDTLS Trigger: AGATAGAGTGTCCTTGAGCAAGGGAGTGGCAATACT...GAGGCACAGGAAAGGACAATATGAATTTTCAGTAGCTTCTTCAATCAAAATGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000379668.3 ENST00000642104.1 |
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| CDS-3UTR CAA 90 bp | GCCATTTTGATTGAAGAAGCTACTGAAAATTCATATTGTCCTTTCCTGTGCCTCATGTTACCCAGAAACTaGGGTATACTGACGGTTGTG | + |
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Preference number: 5 (lower is better) Translates to: AILIEEATENSYCPFLCLMLPRN*GILTVV Trigger: CACAACCGTCAGTATACCCAAGTTTCTGGGTAACAT...GAGGCACAGGAAAGGACAATATGAATTTTCAGTAGCTTCTTCAATCAAAATGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000379668.3 ENST00000642104.1 |
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| CDS-3UTR CAA 90 bp | CAGAGAGAATATTATGGGATTCACAAATATGGAGCTCTACTTAGCACTTATAACATGTTACCCAGAAACTaGGGTATACTGACGGTTGTG | + |
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Preference number: 5 (lower is better) Translates to: QREYYGIHKYGALLSTYNMLPRN*GILTVV Trigger: CACAACCGTCAGTATACCCAAGTTTCTGGGTAACAT...GTTATAAGTGCTAAGTAGAGCTCCATATTTGTGAATCCCATAATATTCTCTCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642104.1 |
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| CDS-3UTR CAA 90 bp | GCCATTTTGATTGAAGAAGCTACTGAAAATTCATATTGTCCTTTCCTGTGCCTCTCACCTCTAAGAATTTaGTGTCTGAACAAGCAAGTT | + |
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Preference number: 5 (lower is better) Translates to: AILIEEATENSYCPFLCLSPLRI*CLNKQV Trigger: AACTTGCTTGTTCAGACACAAAATTCTTAGAGGTGA...GAGGCACAGGAAAGGACAATATGAATTTTCAGTAGCTTCTTCAATCAAAATGGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000379668.3 ENST00000642104.1 |
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| CDS GCA 90 bp | TTCACTAACATTCAGAATGGCTGGAATAGTAGAGATATTAGCAAATaGCATTGCTATCCAGTAAAACCAGGATTTCTGAAAACATTCACT | + |
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Preference number: 5 (lower is better) Translates to: FTNIQNGWNSRDISK*HCYPVKPGFLKTFT Trigger: AGTGAATGTTTTCAGAAATCCTGGTTTTACTGGATAGCAATGGCATTTGCTAATATCTCTACTATTCCAGCCATTCTGAATGTTAGTGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000642104.1 |
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| CDS-3UTR CAA 90 bp | CAGAGAGAATATTATGGGATTCACAAATATGGAGCTCTACTTAGCACTTATAACTCACCTCTAAGAATTTaGTGTCTGAACAAGCAAGTT | + |
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Preference number: 5 (lower is better) Translates to: QREYYGIHKYGALLSTYNSPLRI*CLNKQV Trigger: AACTTGCTTGTTCAGACACAAAATTCTTAGAGGTGA...GTTATAAGTGCTAAGTAGAGCTCCATATTTGTGAATCCCATAATATTCTCTCTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642104.1 |
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| CDS GCA 72 bp | ATTCAGAATGGCTGGAATAGTAGAGATATTAGCAAATaGCATTGCTATCCAGTAAAACCAGGATTTCTGAAA | + |
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Preference number: 6 (lower is better) Translates to: IQNGWNSRDISK*HCYPVKPGFLK Trigger: TTTCAGAAATCCTGGTTTTACTGGATAGCAATGGCATTTGCTAATATCTCTACTATTCCAGCCATTCTGAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000642104.1 |
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