RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OR6B1 (Homo sapiens)

Ensembl gene IDs: ENSG00000221813

Ensembl transcript IDs: ENST00000408922.3, ENST00000641698.1, ENST00000642360.1, ENST00000647270.1

Found 288 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AAGAATGAGACTGTTGAGGGAGTTGCTACCTCTGTCTTAGAAAGATaGGAAATCAGGAAGCTACCACCTATTTTGTTGGCCCCAGAGCTA +
Preference number: 1 (lower is better)
Translates to: KNETVEGVATSVLER*EIRKLPPILLAPEL
Trigger: TAGCTCTGGGGCCAACAAAATAGGTGGTAGCTTCCTGATTTCCCATCTTTCTAAGACAGAGGTAGCAACTCCCTCAACAGTCTCATTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR CCA 90 bp CTTATATCTTCCAGCTTCTGGTGGCCCAAGGTATTTCTTGGCTTGTaGATGCAGAACTCCAATCTCTATCTCTACCTTCACATCACCTTC +
Preference number: 1 (lower is better)
Translates to: LISSSFWWPKVFLGL*MQNSNLYLYLHITF
Trigger: GAAGGTGATGTGAAGGTAGAGATAGAGATTGGAGTTCTGCATCCACAAGCCAAGAAATACCTTGGGCCACCAGAAGCTGGAAGATATAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR CCA 90 bp ATTAACATGGGCAGTGTCCTAACTGAGTCGTTAAAGGAGAAAGGATaGAGGAAGACATACAGGCACCCACTCAGACCTTTCTTTCTAATC +
Preference number: 1 (lower is better)
Translates to: INMGSVLTESLKEKG*RKTYRHPLRPFFLI
Trigger: GATTAGAAAGAAAGGTCTGAGTGGGTGCCTGTATGTCTTCCTCCATCCTTTCTCCTTTAACGACTCAGTTAGGACACTGCCCATGTTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR GCA 90 bp AGACTCCATATCTTCCCTTGCTGTTTCTCTACCTGGAATGTTCTTTaGCAAAGTAGCCATATATCTTACTCTCACAGCTTCTCCAGGTTT +
Preference number: 1 (lower is better)
Translates to: RLHIFPCCFSTWNVL*QSSHISYSHSFSRF
Trigger: AAACCTGGAGAAGCTGTGAGAGTAAGATATATGGCTACTTTGGCAAAGAACATTCCAGGTAGAGAAACAGCAAGGGAAGATATGGAGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR CCA 90 bp ATCATTACTTATATCTTCCAGCTTCTGGTGGCCCAAGGTATTTCTTaGCTTGTGGATGCAGAACTCCAATCTCTATCTCTACCTTCACAT +
Preference number: 1 (lower is better)
Translates to: IITYIFQLLVAQGIS*LVDAELQSLSLPSH
Trigger: ATGTGAAGGTAGAGATAGAGATTGGAGTTCTGCATCCACAAGCCAAGAAATACCTTGGGCCACCAGAAGCTGGAAGATATAAGTAATGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR TCA 90 bp TCTGTTTTCTCTTCTCTCTCATATAAGGAACTTGTCATTGGACATTaGGTCCACTCGGATAATCCAGAATGGTCTCAGTTTGAGGTCCTT +
Preference number: 1 (lower is better)
Translates to: SVFSSLSYKELVIGH*VHSDNPEWSQFEVL
Trigger: AAGGACCTCAAACTGAGACCATTCTGGATTATCCGAGTGGACTCAATGTCCAATGACAAGTTCCTTATATGAGAGAGAAGAGAAAACAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR GCA 90 bp CTTCCCAAACAGTTTTCCCATGCAAACCCTAATCTAGTGGCAGCTTaGTTAGATCATGCACTGCCCAAGATATTTAACAATCAATGTCTT +
Preference number: 1 (lower is better)
Translates to: LPKQFSHANPNLVAA*LDHALPKIFNNQCL
Trigger: AAGACATTGATTGTTAAATATCTTGGGCAGTGCATGATCTAAGCAAGCTGCCACTAGATTAGGGTTTGCATGGGAAAACTGTTTGGGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR GCA 90 bp GCCAAAGTAGCCATATATCTTACTCTCACAGCTTCTCCAGGTTTTTaGTCAAACATTTCTTCCTCACTTGGTGATTCTGTGACCATCTTA +
Preference number: 1 (lower is better)
Translates to: AKVAIYLTLTASPGF*SNISSSLGDSVTIL
Trigger: TAAGATGGTCACAGAATCACCAAGTGAGGAAGAAATGTTTGAGCAAAAACCTGGAGAAGCTGTGAGAGTAAGATATATGGCTACTTTGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR GCA 90 bp TTCAATGTCCCTCAAACATACTACACAAGACTCCATATCTTCCCTTaGTGTTTCTCTACCTGGAATGTTCTTTGCCAAAGTAGCCATATA +
Preference number: 1 (lower is better)
Translates to: FNVPQTYYTRLHIFP*CFSTWNVLCQSSHI
Trigger: TATATGGCTACTTTGGCAAAGAACATTCCAGGTAGAGAAACAGCAAGGGAAGATATGGAGTCTTGTGTAGTATGTTTGAGGGACATTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR CCA 90 bp CATGCTTTCTTCCTCCCCATCCATAGCACTTATTGCCACCCAAATTaGGATGTGTATTTATTTCCCAGGGTTTTTATAACAAATTACCAC +
Preference number: 1 (lower is better)
Translates to: HAFFLPIHSTYCHPN*DVYLFPRVFITNYH
Trigger: GTGGTAATTTGTTATAAAAACCCTGGGAAATAAATACACATCCCAATTTGGGTGGCAATAAGTGCTATGGATGGGGAGGAAGAAAGCATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR TCA 90 bp ACCTCTGCTCTCCCACTGTCTGTGGTTGTATGTTATTTACTTCCTTaGACATCTGTTCTGGAAGTTTATAAAATGGAACAAATAATTCTG +
Preference number: 1 (lower is better)
Translates to: TSALPLSVVVCYLLP*TSVLEVYKMEQIIL
Trigger: CAGAATTATTTGTTCCATTTTATAAACTTCCAGAACAGATGTTCAAGGAAGTAAATAACATACAACCACAGACAGTGGGAGAGCAGAGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR GCA 90 bp ACAATCAATGTCTTTTCCATCATGGTAGTTGATCCTCATAACCATTaGGTAAGAAACACCAAGCAACTATTATTACTCCTGTTTTACACA +
Preference number: 1 (lower is better)
Translates to: TINVFSIMVVDPHNH*VRNTKQLLLLLFYT
Trigger: TGTGTAAAACAGGAGTAATAATAGTTGCTTGGTGTTTCTTACGCAATGGTTATGAGGATCAACTACCATGATGGAAAAGACATTGATTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR-3UTR TCA 90 bp CCTGTGCACTTAGGTATTCCTTCCACAAAGGGGAAGGAGCTCAATGTTCCATCTAGGGAACTGGGACTTTaGCCTCTGCTCTCCCACTGT +
Preference number: 2 (lower is better)
Translates to: PVHLGIPSTKGKELNVPSRELGL*PLLSHC
Trigger: ACAGTGGGAGAGCAGAGGTCAAAGTCCCAGTTCCCT...AGATGGAACATTGAGCTCCTTCCCCTTTGTGGAAGGAATACCTAAGTGCACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR-3UTR TCA 90 bp ACATGGTTGGGGAGGCCTCAGGAAACTTACAATCATGGCAGGAGGCGAAGGGGAGAATTAAATTCCCACTaGTGTTGGCCCACTATGTTG +
Preference number: 2 (lower is better)
Translates to: TWLGRPQETYNHGRRRRGELNSH*CWPTML
Trigger: CAACATAGTGGGCCAACATCAGTGGGAATTTAATTC...TCCCCTTCGCCTCCTGCCATGATTGTAAGTTTCCTGAGGCCTCCCCAACCATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR-3UTR TCA 90 bp CTTACCCTTTTCTCACTGCTCTGGCTGCTCAGTCTCTTCAATGTCCCTCAAACAGGGCAGTGTCCTAACTaGGTCGTTAAAGGAGAAAGG +
Preference number: 2 (lower is better)
Translates to: LTLFSLLWLLSLFNVPQTGQCPN*VVKGER
Trigger: CCTTTCTCCTTTAACGACTCAGTTAGGACACTGCCC...TGTTTGAGGGACATTGAAGAGACTGAGCAGCCAGAGCAGTGAGAAAAGGGTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR-3UTR TCA 90 bp ACATGGTTGGGGAGGCCTCAGGAAACTTACAATCATGGCAGGAGGCGAAGGGGAGGATTACAATCAAGATaGGATTTGGGTAGGGAAACA +
Preference number: 2 (lower is better)
Translates to: TWLGRPQETYNHGRRRRGGLQSR*DLGRET
Trigger: TGTTTCCCTACCCAAATCTCATCTTGATTGTAATCC...TCCCCTTCGCCTCCTGCCATGATTGTAAGTTTCCTGAGGCCTCCCCAACCATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR-3UTR TCA 90 bp AGGTATTTCTTGGCTTGTGGATGCAGAACTCCAATCTCTATCTCTACCTTCACAAGGGAACTGGGACTTTaGCCTCTGCTCTCCCACTGT +
Preference number: 2 (lower is better)
Translates to: RYFLACGCRTPISISTFTRELGL*PLLSHC
Trigger: ACAGTGGGAGAGCAGAGGTCAAAGTCCCAGTTCCCT...TGTGAAGGTAGAGATAGAGATTGGAGTTCTGCATCCACAAGCCAAGAAATACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR-3UTR GCA 90 bp GACCATATCACCTGCTTACCCTTTTCTCACTGCTCTGGCTGCTCAGTCTCTTCAAACAAGATCACCAAATaGCCTGAAACTTCCGGCTTG +
Preference number: 2 (lower is better)
Translates to: DHITCLPFSHCSGCSVSSNKITK*PETSGL
Trigger: CAAGCCGGAAGTTTCAGGGCATTTGGTGATCTTGTT...TGAAGAGACTGAGCAGCCAGAGCAGTGAGAAAAGGGTAAGCAGGTGATATGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR-3UTR CCA 90 bp CAGAGCCAGACCATATCACCTGCTTACCCTTTTCTCACTGCTCTGGCTGCTCAGTCTGTCTTAGAAAGATaGGAAATCAGGAAGCTACCA +
Preference number: 2 (lower is better)
Translates to: QSQTISPAYPFLTALAAQSVLER*EIRKLP
Trigger: TGGTAGCTTCCTGATTTCCCATCTTTCTAAGACAGA...CTGAGCAGCCAGAGCAGTGAGAAAAGGGTAAGCAGGTGATATGGTCTGGCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR-3UTR TCA 90 bp GACCATATCACCTGCTTACCCTTTTCTCACTGCTCTGGCTGCTCAGTCTCTTCACCAATGGCAAAACTATaGACCAAGAGCAAGCATATC +
Preference number: 2 (lower is better)
Translates to: DHITCLPFSHCSGCSVSSPMAKL*TKSKHI
Trigger: GATATGCTTGCTCTTGGTTCATAGTTTTGCCATTGG...TGAAGAGACTGAGCAGCCAGAGCAGTGAGAAAAGGGTAAGCAGGTGATATGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR-3UTR TCA 90 bp GACCATATCACCTGCTTACCCTTTTCTCACTGCTCTGGCTGCTCAGTCTCTTCAACTACCAGCCTTTTATaGTGGTTACCCCAACAAGAT +
Preference number: 2 (lower is better)
Translates to: DHITCLPFSHCSGCSVSSTTSLL*WLPQQD
Trigger: ATCTTGTTGGGGTAACCATCATAAAAGGCTGGTAGT...TGAAGAGACTGAGCAGCCAGAGCAGTGAGAAAAGGGTAAGCAGGTGATATGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR-3UTR TCA 90 bp AGGTATTTCTTGGCTTGTGGATGCAGAACTCCAATCTCTATCTCTACCTTCACAGGGCAGTGTCCTAACTaGGTCGTTAAAGGAGAAAGG +
Preference number: 2 (lower is better)
Translates to: RYFLACGCRTPISISTFTGQCPN*VVKGER
Trigger: CCTTTCTCCTTTAACGACTCAGTTAGGACACTGCCC...TGTGAAGGTAGAGATAGAGATTGGAGTTCTGCATCCACAAGCCAAGAAATACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR-3UTR TCA 90 bp CCTGTGCACTTAGGTATTCCTTCCACAAAGGGGAAGGAGCTCAATGTTCCATCTCCTGTTACTTATCTCTaGGTTGAGTGTGGAGAAAGT +
Preference number: 2 (lower is better)
Translates to: PVHLGIPSTKGKELNVPSPVTYL*VECGES
Trigger: ACTTTCTCCACACTCAACTCAGAGATAAGTAACAGG...AGATGGAACATTGAGCTCCTTCCCCTTTGTGGAAGGAATACCTAAGTGCACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR-3UTR TCA 90 bp GACCATATCACCTGCTTACCCTTTTCTCACTGCTCTGGCTGCTCAGTCTCTTCAATAGGTAAGGAAAGTTaGGAATCACTATGGCATGGA +
Preference number: 2 (lower is better)
Translates to: DHITCLPFSHCSGCSVSSIGKES*ESLWHG
Trigger: TCCATGCCATAGTGATTCTCAACTTTCCTTACCTAT...TGAAGAGACTGAGCAGCCAGAGCAGTGAGAAAAGGGTAAGCAGGTGATATGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR-3UTR TCA 90 bp GACCATATCACCTGCTTACCCTTTTCTCACTGCTCTGGCTGCTCAGTCTCTTCATTCTTCCTCACTTGGTaGTTCTGTGACCATCTTATT +
Preference number: 2 (lower is better)
Translates to: DHITCLPFSHCSGCSVSSFFLTW*FCDHLI
Trigger: AATAAGATGGTCACAGAATCACCAAGTGAGGAAGAA...TGAAGAGACTGAGCAGCCAGAGCAGTGAGAAAAGGGTAAGCAGGTGATATGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR-3UTR CCA 90 bp GTATTTCTTGGCTTGTGGATGCAGAACTCCAATCTCTATCTCTACCTTCACATCGAAAGACCCAGGGTTTaGATTCAGGGAACTGGGACT +
Preference number: 2 (lower is better)
Translates to: VFLGLWMQNSNLYLYLHIERPRV*IQGTGT
Trigger: AGTCCCAGTTCCCTGAATCCAAACCCTGGGTCTTTC...GATGTGAAGGTAGAGATAGAGATTGGAGTTCTGCATCCACAAGCCAAGAAATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR-3UTR CCA 90 bp CAGAGCCAGACCATATCACCTGCTTACCCTTTTCTCACTGCTCTGGCTGCTCAGTATAACTATAGTATGTaGAGTCAACTAGGTGTGGAA +
Preference number: 2 (lower is better)
Translates to: QSQTISPAYPFLTALAAQYNYSM*SQLGVE
Trigger: TTCCACACCTAGTTGACTCCACATACTATAGTTATA...CTGAGCAGCCAGAGCAGTGAGAAAAGGGTAAGCAGGTGATATGGTCTGGCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR CAA 90 bp ACCTCTGTCTTAGAAAGATGGGAAATCAGGAAGCTACCACCTATTTaGTTGGCCCCAGAGCTATTAGTGTATGGCAGATCCAAAAACAGC +
Preference number: 2 (lower is better)
Translates to: TSVLERWEIRKLPPI*LAPELLVYGRSKNS
Trigger: GCTGTTTTTGGATCTGCCATACACTAATAGCTCTGGGGCCAACAAAATAGGTGGTAGCTTCCTGATTTCCCATCTTTCTAAGACAGAGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR CAA 90 bp TTACTTATATCTTCCAGCTTCTGGTGGCCCAAGGTATTTCTTGGCTaGTGGATGCAGAACTCCAATCTCTATCTCTACCTTCACATCACC +
Preference number: 2 (lower is better)
Translates to: LLISSSFWWPKVFLG*WMQNSNLYLYLHIT
Trigger: GGTGATGTGAAGGTAGAGATAGAGATTGGAGTTCTGCATCCACAAGCCAAGAAATACCTTGGGCCACCAGAAGCTGGAAGATATAAGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR-3UTR GCA 90 bp CTACCAGCCTTTTATGATGGTTACCCCAACAAGATCACCAAATGCCCTGAAACTAGAGCACTGACCATATaGACAGATGCAGATACCCAA +
Preference number: 2 (lower is better)
Translates to: LPAFYDGYPNKITKCPETRALTI*TDADTQ
Trigger: TTGGGTATCTGCATCTGTGCATATGGTCAGTGCTCT...AGTTTCAGGGCATTTGGTGATCTTGTTGGGGTAACCATCATAAAAGGCTGGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR-3UTR GCA 90 bp CCTGTGCACTTAGGTATTCCTTCCACAAAGGGGAAGGAGCTCAATGTTCCATCTTCACAACTTACTTGTTaGATCAAGGGACCAAACTAC +
Preference number: 2 (lower is better)
Translates to: PVHLGIPSTKGKELNVPSSQLTC*IKGPNY
Trigger: GTAGTTTGGTCCCTTGATGCAACAAGTAAGTTGTGA...AGATGGAACATTGAGCTCCTTCCCCTTTGTGGAAGGAATACCTAAGTGCACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR-3UTR GCA 90 bp CTTACCCTTTTCTCACTGCTCTGGCTGCTCAGTCTCTTCAATGTCCCTCAAACAGATCCTCATAACCATTaGGTAAGAAACACCAAGCAA +
Preference number: 2 (lower is better)
Translates to: LTLFSLLWLLSLFNVPQTDPHNH*VRNTKQ
Trigger: TTGCTTGGTGTTTCTTACGCAATGGTTATGAGGATC...TGTTTGAGGGACATTGAAGAGACTGAGCAGCCAGAGCAGTGAGAAAAGGGTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR-3UTR GCA 90 bp CCTGTGCACTTAGGTATTCCTTCCACAAAGGGGAAGGAGCTCAATGTTCCATCTGATCCTCATAACCATTaGGTAAGAAACACCAAGCAA +
Preference number: 2 (lower is better)
Translates to: PVHLGIPSTKGKELNVPSDPHNH*VRNTKQ
Trigger: TTGCTTGGTGTTTCTTACGCAATGGTTATGAGGATC...AGATGGAACATTGAGCTCCTTCCCCTTTGTGGAAGGAATACCTAAGTGCACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR-3UTR GCA 90 bp CTTTGCCAAAGTAGCCATATATCTTACTCTCACAGCTTCTCCAGGTTTTTGCTCAATCTAGTGGCAGCTTaGTTAGATCATGCACTGCCC +
Preference number: 2 (lower is better)
Translates to: LCQSSHISYSHSFSRFLLNLVAA*LDHALP
Trigger: GGGCAGTGCATGATCTAAGCAAGCTGCCACTAGATT...GAGCAAAAACCTGGAGAAGCTGTGAGAGTAAGATATATGGCTACTTTGGCAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR-3UTR CCA 90 bp AGGTATTTCTTGGCTTGTGGATGCAGAACTCCAATCTCTATCTCTACCTTCACATTGGATTCAGGGAACTaGGACTTTGACCTCTGCTCT +
Preference number: 2 (lower is better)
Translates to: RYFLACGCRTPISISTFTLDSGN*DFDLCS
Trigger: AGAGCAGAGGTCAAAGTCCCAGTTCCCTGAATCCAA...TGTGAAGGTAGAGATAGAGATTGGAGTTCTGCATCCACAAGCCAAGAAATACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR-3UTR TCA 90 bp CTTTGCCAAAGTAGCCATATATCTTACTCTCACAGCTTCTCCAGGTTTTTGCTCTGGGGTCACAACCATTaGGAACTGTTTTCTCTAGCT +
Preference number: 2 (lower is better)
Translates to: LCQSSHISYSHSFSRFLLWGHNH*ELFSLA
Trigger: AGCTAGAGAAAACAGTTCTCAATGGTTGTGACCCCA...GAGCAAAAACCTGGAGAAGCTGTGAGAGTAAGATATATGGCTACTTTGGCAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR-3UTR TCA 90 bp CTACCAGCCTTTTATGATGGTTACCCCAACAAGATCACCAAATGCCCTGAAACTCCTGTTACTTATCTCTaGGTTGAGTGTGGAGAAAGT +
Preference number: 2 (lower is better)
Translates to: LPAFYDGYPNKITKCPETPVTYL*VECGES
Trigger: ACTTTCTCCACACTCAACTCAGAGATAAGTAACAGG...AGTTTCAGGGCATTTGGTGATCTTGTTGGGGTAACCATCATAAAAGGCTGGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR-3UTR TCA 90 bp CTACCAGCCTTTTATGATGGTTACCCCAACAAGATCACCAAATGCCCTGAAACTAGCACATTTGATCAATaGGGTTCTAGCGTGTGTGTA +
Preference number: 2 (lower is better)
Translates to: LPAFYDGYPNKITKCPETSTFDQ*GSSVCV
Trigger: TACACACACGCTAGAACCTCATTGATCAAATGTGCT...AGTTTCAGGGCATTTGGTGATCTTGTTGGGGTAACCATCATAAAAGGCTGGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR-3UTR TCA 90 bp CTTACCCTTTTCTCACTGCTCTGGCTGCTCAGTCTCTTCAATGTCCCTCAAACACATTATTTTCTCTGTTaGGGCAGATTTCTACATTGG +
Preference number: 2 (lower is better)
Translates to: LTLFSLLWLLSLFNVPQTHYFLC*GRFLHW
Trigger: CCAATGTAGAAATCTGCCTCAACAGAGAAAATAATG...TGTTTGAGGGACATTGAAGAGACTGAGCAGCCAGAGCAGTGAGAAAAGGGTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR-3UTR TCA 90 bp CTTTGCCAAAGTAGCCATATATCTTACTCTCACAGCTTCTCCAGGTTTTTGCTCAGCACATTTGATCAATaGGGTTCTAGCGTGTGTGTA +
Preference number: 2 (lower is better)
Translates to: LCQSSHISYSHSFSRFLLSTFDQ*GSSVCV
Trigger: TACACACACGCTAGAACCTCATTGATCAAATGTGCT...GAGCAAAAACCTGGAGAAGCTGTGAGAGTAAGATATATGGCTACTTTGGCAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR-3UTR TCA 90 bp CTTTGCCAAAGTAGCCATATATCTTACTCTCACAGCTTCTCCAGGTTTTTGCTCCCAATGGCAAAACTATaGACCAAGAGCAAGCATATC +
Preference number: 2 (lower is better)
Translates to: LCQSSHISYSHSFSRFLLPMAKL*TKSKHI
Trigger: GATATGCTTGCTCTTGGTTCATAGTTTTGCCATTGG...GAGCAAAAACCTGGAGAAGCTGTGAGAGTAAGATATATGGCTACTTTGGCAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR-3UTR TCA 90 bp CTTTGCCAAAGTAGCCATATATCTTACTCTCACAGCTTCTCCAGGTTTTTGCTCACTACCAGCCTTTTATaGTGGTTACCCCAACAAGAT +
Preference number: 2 (lower is better)
Translates to: LCQSSHISYSHSFSRFLLTTSLL*WLPQQD
Trigger: ATCTTGTTGGGGTAACCATCATAAAAGGCTGGTAGT...GAGCAAAAACCTGGAGAAGCTGTGAGAGTAAGATATATGGCTACTTTGGCAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR-3UTR GCA 90 bp CTTTGCCAAAGTAGCCATATATCTTACTCTCACAGCTTCTCCAGGTTTTTGCTCATCCATAGCACTTATTaGCACCCAAATTGGGATGTG +
Preference number: 2 (lower is better)
Translates to: LCQSSHISYSHSFSRFLLIHSTY*HPNWDV
Trigger: CACATCCCAATTTGGGTGGCAATAAGTGCTATGGAT...GAGCAAAAACCTGGAGAAGCTGTGAGAGTAAGATATATGGCTACTTTGGCAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR-3UTR CCA 90 bp CTTTGCCAAAGTAGCCATATATCTTACTCTCACAGCTTCTCCAGGTTTTTGCTCATATCTTCCAGCTTCTaGTGGCCCAAGGTATTTCTT +
Preference number: 2 (lower is better)
Translates to: LCQSSHISYSHSFSRFLLISSSF*WPKVFL
Trigger: AAGAAATACCTTGGGCCACCAGAAGCTGGAAGATAT...GAGCAAAAACCTGGAGAAGCTGTGAGAGTAAGATATATGGCTACTTTGGCAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR-3UTR TCA 90 bp TTCATCACAACTTACTTGTTGCATCAAGGGACCAAACTACATTCCAGAAGCAAATGGGGTCACAACCATTaGGAACTGTTTTCTCTAGCT +
Preference number: 2 (lower is better)
Translates to: FITTYLLHQGTKLHSRSKWGHNH*ELFSLA
Trigger: AGCTAGAGAAAACAGTTCTCAATGGTTGTGACCCCA...TTTGCTTCTGGAATGTAGTTTGGTCCCTTGATGCAACAAGTAAGTTGTGATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR-3UTR TCA 90 bp CTTTGCCAAAGTAGCCATATATCTTACTCTCACAGCTTCTCCAGGTTTTTGCTCTACTTATCTCTGAGTTaGGTGTGGAGAAAGTGGAAA +
Preference number: 2 (lower is better)
Translates to: LCQSSHISYSHSFSRFLLYLSLS*VWRKWK
Trigger: TTTCCACTTTCTCCACACTCAACTCAGAGATAAGTA...GAGCAAAAACCTGGAGAAGCTGTGAGAGTAAGATATATGGCTACTTTGGCAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR-3UTR TCA 90 bp AGGTATTTCTTGGCTTGTGGATGCAGAACTCCAATCTCTATCTCTACCTTCACACACTATGGCATGGAATaGAAATCTCTGTCAATTCCT +
Preference number: 2 (lower is better)
Translates to: RYFLACGCRTPISISTFTHYGME*KSLSIP
Trigger: AGGAATTGACAGAGATTTTCATTCCATGCCATAGTG...TGTGAAGGTAGAGATAGAGATTGGAGTTCTGCATCCACAAGCCAAGAAATACCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR-3UTR TCA 90 bp GTATTTCTTGGCTTGTGGATGCAGAACTCCAATCTCTATCTCTACCTTCACATCATAGGTAAGGAAAGTTaGGAATCACTATGGCATGGA +
Preference number: 2 (lower is better)
Translates to: VFLGLWMQNSNLYLYLHIIGKES*ESLWHG
Trigger: TCCATGCCATAGTGATTCTCAACTTTCCTTACCTAT...GATGTGAAGGTAGAGATAGAGATTGGAGTTCTGCATCCACAAGCCAAGAAATAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR-3UTR TCA 90 bp CTTTGCCAAAGTAGCCATATATCTTACTCTCACAGCTTCTCCAGGTTTTTGCTCTTCTTCCTCACTTGGTaGTTCTGTGACCATCTTATT +
Preference number: 2 (lower is better)
Translates to: LCQSSHISYSHSFSRFLLFFLTW*FCDHLI
Trigger: AATAAGATGGTCACAGAATCACCAAGTGAGGAAGAA...GAGCAAAAACCTGGAGAAGCTGTGAGAGTAAGATATATGGCTACTTTGGCAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR-3UTR CCA 90 bp ACTACTGAAACTGACTACCAGCCTTTTATGATGGTTACCCCAACAAGATCACCAATCTCCCTTTGCCAATaGCAAAACTATGAACCAAGA +
Preference number: 2 (lower is better)
Translates to: TTETDYQPFMMVTPTRSPISLCQ*QNYEPR
Trigger: TCTTGGTTCATAGTTTTGCCATTGGCAAAGGGAGAT...TGGTGATCTTGTTGGGGTAACCATCATAAAAGGCTGGTAGTCAGTTTCAGTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR-3UTR CCA 90 bp AGGTATTTCTTGGCTTGTGGATGCAGAACTCCAATCTCTATCTCTACCTTCACATTCCAAAAGTATAGATaGTTTGGCCAAGGTCACATG +
Preference number: 2 (lower is better)
Translates to: RYFLACGCRTPISISTFTFQKYR*FGQGHM
Trigger: CATGTGACCTTGGCCAAACCATCTATACTTTTGGAA...TGTGAAGGTAGAGATAGAGATTGGAGTTCTGCATCCACAAGCCAAGAAATACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR-3UTR CCA 90 bp CTTTGCCAAAGTAGCCATATATCTTACTCTCACAGCTTCTCCAGGTTTTTGCTCTTCCAAAAGTATAGATaGTTTGGCCAAGGTCACATG +
Preference number: 2 (lower is better)
Translates to: LCQSSHISYSHSFSRFLLFQKYR*FGQGHM
Trigger: CATGTGACCTTGGCCAAACCATCTATACTTTTGGAA...GAGCAAAAACCTGGAGAAGCTGTGAGAGTAAGATATATGGCTACTTTGGCAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR-3UTR TCA 90 bp ACTACTGAAACTGACTACCAGCCTTTTATGATGGTTACCCCAACAAGATCACCACATTATTTTCTCTGTTaGGGCAGATTTCTACATTGG +
Preference number: 2 (lower is better)
Translates to: TTETDYQPFMMVTPTRSPHYFLC*GRFLHW
Trigger: CCAATGTAGAAATCTGCCTCAACAGAGAAAATAATG...TGGTGATCTTGTTGGGGTAACCATCATAAAAGGCTGGTAGTCAGTTTCAGTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR-3UTR CCA 90 bp CTTTGCCAAAGTAGCCATATATCTTACTCTCACAGCTTCTCCAGGTTTTTGCTCCTAAAGGATACATTGTaGCACCTAGAAGGGAAATAT +
Preference number: 2 (lower is better)
Translates to: LCQSSHISYSHSFSRFLLLKDTL*HLEGKY
Trigger: ATATTTCCCTTCTAGGTGCCACAATGTATCCTTTAG...GAGCAAAAACCTGGAGAAGCTGTGAGAGTAAGATATATGGCTACTTTGGCAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR-3UTR GCA 90 bp GTAATCCACTATACATTATTTTCTCTGTTGAGGCAGATTTCTACATTGGTCTGTAGAGCACTGACCATATaGACAGATGCAGATACCCAA +
Preference number: 2 (lower is better)
Translates to: VIHYTLFSLLRQISTLVCRALTI*TDADTQ
Trigger: TTGGGTATCTGCATCTGTGCATATGGTCAGTGCTCT...ACAGACCAATGTAGAAATCTGCCTCAACAGAGAAAATAATGTATAGTGGATTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR-3UTR GCA 90 bp ACTACTGAAACTGACTACCAGCCTTTTATGATGGTTACCCCAACAAGATCACCAAGGTTAGTAAGTGCTTaGAAAAAGTGTTGCAAAAAC +
Preference number: 2 (lower is better)
Translates to: TTETDYQPFMMVTPTRSPRLVSA*KKCCKN
Trigger: GTTTTTGCAACACTTTTTGCAAGCACTTACTAACCT...TGGTGATCTTGTTGGGGTAACCATCATAAAAGGCTGGTAGTCAGTTTCAGTAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR-3UTR TCA 90 bp GTAATCCACTATACATTATTTTCTCTGTTGAGGCAGATTTCTACATTGGTCTGTCACTATGGCATGGAATaGAAATCTCTGTCAATTCCT +
Preference number: 2 (lower is better)
Translates to: VIHYTLFSLLRQISTLVCHYGME*KSLSIP
Trigger: AGGAATTGACAGAGATTTTCATTCCATGCCATAGTG...ACAGACCAATGTAGAAATCTGCCTCAACAGAGAAAATAATGTATAGTGGATTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR-3UTR GCA 90 bp AACCAAGAGCAAGCATATCTATGTACCTTCTATGGGTGTAAAGCACATTTGATCAGGTTAGTAAGTGCTTaGAAAAAGTGTTGCAAAAAC +
Preference number: 2 (lower is better)
Translates to: NQEQAYLCTFYGCKAHLIRLVSA*KKCCKN
Trigger: GTTTTTGCAACACTTTTTGCAAGCACTTACTAACCT...GATCAAATGTGCTTTACACCCATAGAAGGTACATAGATATGCTTGCTCTTGGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR-3UTR CCA 90 bp GATCCTCATAACCATTGCGTAAGAAACACCAAGCAACTATTATTACTCCTGTTTCTAAAGGATACATTGTaGCACCTAGAAGGGAAATAT +
Preference number: 2 (lower is better)
Translates to: DPHNHCVRNTKQLLLLLFLKDTL*HLEGKY
Trigger: ATATTTCCCTTCTAGGTGCCACAATGTATCCTTTAG...AAACAGGAGTAATAATAGTTGCTTGGTGTTTCTTACGCAATGGTTATGAGGATC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR GCA 72 bp GATTTGGGTAGGGAAACAGAGCCAGACCATATCACCTaGTTACCCTTTTCTCACTGCTCTGGCTGCTCAGTC +
Preference number: 3 (lower is better)
Translates to: DLGRETEPDHIT*LPFSHCSGCSV
Trigger: GACTGAGCAGCCAGAGCAGTGAGAAAAGGGTAAGCAGGTGATATGGTCTGGCTCTGTTTCCCTACCCAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR TCA 72 bp AAAGACCCAGGGTTTGGATTCAGGGAACTGGGACTTTaGCCTCTGCTCTCCCACTGTCTGTGGTTGTATGTT +
Preference number: 3 (lower is better)
Translates to: KDPGFGFRELGL*PLLSHCLWLYV
Trigger: AACATACAACCACAGACAGTGGGAGAGCAGAGGTCAAAGTCCCAGTTCCCTGAATCCAAACCCTGGGTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR-3UTR CAA 90 bp CAGAGCCAGACCATATCACCTGCTTACCCTTTTCTCACTGCTCTGGCTGCTCAGAAGGTATTTCTTGGCTaGTGGATGCAGAACTCCAAT +
Preference number: 3 (lower is better)
Translates to: QSQTISPAYPFLTALAAQKVFLG*WMQNSN
Trigger: ATTGGAGTTCTGCATCCACAAGCCAAGAAATACCTT...CTGAGCAGCCAGAGCAGTGAGAAAAGGGTAAGCAGGTGATATGGTCTGGCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR CCA 72 bp TCCAGCTTCTGGTGGCCCAAGGTATTTCTTGGCTTGTaGATGCAGAACTCCAATCTCTATCTCTACCTTCAC +
Preference number: 3 (lower is better)
Translates to: SSFWWPKVFLGL*MQNSNLYLYLH
Trigger: GTGAAGGTAGAGATAGAGATTGGAGTTCTGCATCCACAAGCCAAGAAATACCTTGGGCCACCAGAAGCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR-3UTR CAA 90 bp CCTGTGCACTTAGGTATTCCTTCCACAAAGGGGAAGGAGCTCAATGTTCCATCTCTACCACCTATTTTGTaGGCCCCAGAGCTATTAGTG +
Preference number: 3 (lower is better)
Translates to: PVHLGIPSTKGKELNVPSLPPIL*APELLV
Trigger: CACTAATAGCTCTGGGGCCAACAAAATAGGTGGTAG...AGATGGAACATTGAGCTCCTTCCCCTTTGTGGAAGGAATACCTAAGTGCACAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR-3UTR CAA 90 bp CTTACCCTTTTCTCACTGCTCTGGCTGCTCAGTCTCTTCAATGTCCCTCAAACATCAAGAATGAGACTGTaGAGGGAGTTGCTACCTCTG +
Preference number: 3 (lower is better)
Translates to: LTLFSLLWLLSLFNVPQTSRMRL*RELLPL
Trigger: CAGAGGTAGCAACTCCCTCAACAGTCTCATTCTTGA...TGTTTGAGGGACATTGAAGAGACTGAGCAGCCAGAGCAGTGAGAAAAGGGTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR-3UTR CAA 90 bp GACCATATCACCTGCTTACCCTTTTCTCACTGCTCTGGCTGCTCAGTCTCTTCAGGGTGTAAAGCACATTaGATCAATGAGGTTCTAGCG +
Preference number: 3 (lower is better)
Translates to: DHITCLPFSHCSGCSVSSGCKAH*INEVLA
Trigger: CGCTAGAACCTCATTGATCAAATGTGCTTTACACCC...TGAAGAGACTGAGCAGCCAGAGCAGTGAGAAAAGGGTAAGCAGGTGATATGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR-3UTR CAA 90 bp CTTACCCTTTTCTCACTGCTCTGGCTGCTCAGTCTCTTCAATGTCCCTCAAACACCACTAAAGGATACATaGTGGCACCTAGAAGGGAAA +
Preference number: 3 (lower is better)
Translates to: LTLFSLLWLLSLFNVPQTPLKDT*WHLEGK
Trigger: TTTCCCTTCTAGGTGCCACAATGTATCCTTTAGTGG...TGTTTGAGGGACATTGAAGAGACTGAGCAGCCAGAGCAGTGAGAAAAGGGTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR-3UTR CAA 90 bp CCTGTGCACTTAGGTATTCCTTCCACAAAGGGGAAGGAGCTCAATGTTCCATCTCCACTAAAGGATACATaGTGGCACCTAGAAGGGAAA +
Preference number: 3 (lower is better)
Translates to: PVHLGIPSTKGKELNVPSPLKDT*WHLEGK
Trigger: TTTCCCTTCTAGGTGCCACAATGTATCCTTTAGTGG...AGATGGAACATTGAGCTCCTTCCCCTTTGTGGAAGGAATACCTAAGTGCACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR-3UTR CAA 90 bp GACCATATCACCTGCTTACCCTTTTCTCACTGCTCTGGCTGCTCAGTCTCTTCAAGGCAGATTTCTACATaGGTCTGTGTCCTTACTTTG +
Preference number: 3 (lower is better)
Translates to: DHITCLPFSHCSGCSVSSRQIST*VCVLTL
Trigger: CAAAGTAAGGACACAGACCAATGTAGAAATCTGCCT...TGAAGAGACTGAGCAGCCAGAGCAGTGAGAAAAGGGTAAGCAGGTGATATGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR GCA 72 bp CAGGGTTTGGATTCAGGGAACTGGGACTTTGACCTCTaGTCTCCCACTGTCTGTGGTTGTATGTTATTTACT +
Preference number: 3 (lower is better)
Translates to: QGLDSGNWDFDL*SPTVCGCMLFT
Trigger: AGTAAATAACATACAACCACAGACAGTGGGAGAGCAGAGGTCAAAGTCCCAGTTCCCTGAATCCAAACCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR GCA 72 bp GCTTCTGGTGGCCCAAGGTATTTCTTGGCTTGTGGATaGAGAACTCCAATCTCTATCTCTACCTTCACATCA +
Preference number: 3 (lower is better)
Translates to: ASGGPRYFLACG*RTPISISTFTS
Trigger: TGATGTGAAGGTAGAGATAGAGATTGGAGTTCTGCATCCACAAGCCAAGAAATACCTTGGGCCACCAGAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR CCA 72 bp AGACCATATCACCTGCTTACCCTTTTCTCACTGCTCTaGCTGCTCAGTCTCTTCAATGTCCCTCAAACATAC +
Preference number: 3 (lower is better)
Translates to: RPYHLLTLFSLL*LLSLFNVPQTY
Trigger: GTATGTTTGAGGGACATTGAAGAGACTGAGCAGCCAGAGCAGTGAGAAAAGGGTAAGCAGGTGATATGGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR GCA 72 bp CATATCACCTGCTTACCCTTTTCTCACTGCTCTGGCTaGTCAGTCTCTTCAATGTCCCTCAAACATACTACA +
Preference number: 3 (lower is better)
Translates to: HITCLPFSHCSG*SVSSMSLKHTT
Trigger: TGTAGTATGTTTGAGGGACATTGAAGAGACTGAGCAGCCAGAGCAGTGAGAAAAGGGTAAGCAGGTGATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR CCA 72 bp ACTGTTGAGGGAGTTGCTACCTCTGTCTTAGAAAGATaGGAAATCAGGAAGCTACCACCTATTTTGTTGGCC +
Preference number: 3 (lower is better)
Translates to: TVEGVATSVLER*EIRKLPPILLA
Trigger: GGCCAACAAAATAGGTGGTAGCTTCCTGATTTCCCATCTTTCTAAGACAGAGGTAGCAACTCCCTCAACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR-3UTR CAA 90 bp CTTTGCCAAAGTAGCCATATATCTTACTCTCACAGCTTCTCCAGGTTTTTGCTCCTACCACCTATTTTGTaGGCCCCAGAGCTATTAGTG +
Preference number: 3 (lower is better)
Translates to: LCQSSHISYSHSFSRFLLLPPIL*APELLV
Trigger: CACTAATAGCTCTGGGGCCAACAAAATAGGTGGTAG...GAGCAAAAACCTGGAGAAGCTGTGAGAGTAAGATATATGGCTACTTTGGCAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR-3UTR CAA 90 bp GACCATATCACCTGCTTACCCTTTTCTCACTGCTCTGGCTGCTCAGTCTCTTCACAGGTTAGTAAGTGCTaGCAAAAAGTGTTGCAAAAA +
Preference number: 3 (lower is better)
Translates to: DHITCLPFSHCSGCSVSSQVSKC*QKVLQK
Trigger: TTTTTGCAACACTTTTTGCAAGCACTTACTAACCTG...TGAAGAGACTGAGCAGCCAGAGCAGTGAGAAAAGGGTAAGCAGGTGATATGGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR-3UTR CAA 90 bp GTAATCCACTATACATTATTTTCTCTGTTGAGGCAGATTTCTACATTGGTCTGTCAGGGAACTGGGACTTaGACCTCTGCTCTCCCACTG +
Preference number: 3 (lower is better)
Translates to: VIHYTLFSLLRQISTLVCQGTGT*TSALPL
Trigger: CAGTGGGAGAGCAGAGGTCAAAGTCCCAGTTCCCTG...ACAGACCAATGTAGAAATCTGCCTCAACAGAGAAAATAATGTATAGTGGATTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR-3UTR CAA 90 bp CTTTGCCAAAGTAGCCATATATCTTACTCTCACAGCTTCTCCAGGTTTTTGCTCAAGCTACCACCTATTTaGTTGGCCCCAGAGCTATTA +
Preference number: 3 (lower is better)
Translates to: LCQSSHISYSHSFSRFLLKLPPI*LAPELL
Trigger: TAATAGCTCTGGGGCCAACAAAATAGGTGGTAGCTT...GAGCAAAAACCTGGAGAAGCTGTGAGAGTAAGATATATGGCTACTTTGGCAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR-3UTR CAA 90 bp ACTACTGAAACTGACTACCAGCCTTTTATGATGGTTACCCCAACAAGATCACCAAAGCTACCACCTATTTaGTTGGCCCCAGAGCTATTA +
Preference number: 3 (lower is better)
Translates to: TTETDYQPFMMVTPTRSPKLPPI*LAPELL
Trigger: TAATAGCTCTGGGGCCAACAAAATAGGTGGTAGCTT...TGGTGATCTTGTTGGGGTAACCATCATAAAAGGCTGGTAGTCAGTTTCAGTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR-3UTR CAA 90 bp GTATTTCTTGGCTTGTGGATGCAGAACTCCAATCTCTATCTCTACCTTCACATCAAATTCCCACTGATGTaGGCCCACTATGTTGAATAC +
Preference number: 3 (lower is better)
Translates to: VFLGLWMQNSNLYLYLHIKFPLM*AHYVEY
Trigger: GTATTCAACATAGTGGGCCAACATCAGTGGGAATTT...GATGTGAAGGTAGAGATAGAGATTGGAGTTCTGCATCCACAAGCCAAGAAATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR-3UTR CAA 90 bp CTTTGCCAAAGTAGCCATATATCTTACTCTCACAGCTTCTCCAGGTTTTTGCTCAACTTCCGGCTTGCTTaGTGTGTCACCTTAGAAATA +
Preference number: 3 (lower is better)
Translates to: LCQSSHISYSHSFSRFLLNFRLA*CVTLEI
Trigger: TATTTCTAAGGTGACACACAAAGCAAGCCGGAAGTT...GAGCAAAAACCTGGAGAAGCTGTGAGAGTAAGATATATGGCTACTTTGGCAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR-3UTR CAA 90 bp AGGTATTTCTTGGCTTGTGGATGCAGAACTCCAATCTCTATCTCTACCTTCACATTCATCACAACTTACTaGTTGCATCAAGGGACCAAA +
Preference number: 3 (lower is better)
Translates to: RYFLACGCRTPISISTFTFITTY*LHQGTK
Trigger: TTTGGTCCCTTGATGCAACAAGTAAGTTGTGATGAA...TGTGAAGGTAGAGATAGAGATTGGAGTTCTGCATCCACAAGCCAAGAAATACCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR-3UTR CAA 90 bp CTTTGCCAAAGTAGCCATATATCTTACTCTCACAGCTTCTCCAGGTTTTTGCTCTTCATCACAACTTACTaGTTGCATCAAGGGACCAAA +
Preference number: 3 (lower is better)
Translates to: LCQSSHISYSHSFSRFLLFITTY*LHQGTK
Trigger: TTTGGTCCCTTGATGCAACAAGTAAGTTGTGATGAA...GAGCAAAAACCTGGAGAAGCTGTGAGAGTAAGATATATGGCTACTTTGGCAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR-3UTR CAA 90 bp CTTTGCCAAAGTAGCCATATATCTTACTCTCACAGCTTCTCCAGGTTTTTGCTCGGGTTCCTTATGAGTTaGGATGGTGATAATCAAATC +
Preference number: 3 (lower is better)
Translates to: LCQSSHISYSHSFSRFLLGFLMS*DGDNQI
Trigger: GATTTGATTATCACCATCCAAACTCATAAGGAACCC...GAGCAAAAACCTGGAGAAGCTGTGAGAGTAAGATATATGGCTACTTTGGCAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR-3UTR CAA 90 bp AGGTATTTCTTGGCTTGTGGATGCAGAACTCCAATCTCTATCTCTACCTTCACATCTCATATAAGGAACTaGTCATTGGACATTGAGTCC +
Preference number: 3 (lower is better)
Translates to: RYFLACGCRTPISISTFTSHIRN*SLDIES
Trigger: GGACTCAATGTCCAATGACAAGTTCCTTATATGAGA...TGTGAAGGTAGAGATAGAGATTGGAGTTCTGCATCCACAAGCCAAGAAATACCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR TCA 72 bp TCTTCTCTCTCATATAAGGAACTTGTCATTGGACATTaGGTCCACTCGGATAATCCAGAATGGTCTCAGTTT +
Preference number: 3 (lower is better)
Translates to: SSLSYKELVIGH*VHSDNPEWSQF
Trigger: AAACTGAGACCATTCTGGATTATCCGAGTGGACTCAATGTCCAATGACAAGTTCCTTATATGAGAGAGAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR CCA 72 bp TTCCTCCCCATCCATAGCACTTATTGCCACCCAAATTaGGATGTGTATTTATTTCCCAGGGTTTTTATAACA +
Preference number: 3 (lower is better)
Translates to: FLPIHSTYCHPN*DVYLFPRVFIT
Trigger: TGTTATAAAAACCCTGGGAAATAAATACACATCCCAATTTGGGTGGCAATAAGTGCTATGGATGGGGAGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR GCA 72 bp GTCTTTTCCATCATGGTAGTTGATCCTCATAACCATTaGGTAAGAAACACCAAGCAACTATTATTACTCCTG +
Preference number: 3 (lower is better)
Translates to: VFSIMVVDPHNH*VRNTKQLLLLL
Trigger: CAGGAGTAATAATAGTTGCTTGGTGTTTCTTACGCAATGGTTATGAGGATCAACTACCATGATGGAAAAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR-3UTR CAA 90 bp GTAATCCACTATACATTATTTTCTCTGTTGAGGCAGATTTCTACATTGGTCTGTAAATTCCCACTGATGTaGGCCCACTATGTTGAATAC +
Preference number: 3 (lower is better)
Translates to: VIHYTLFSLLRQISTLVCKFPLM*AHYVEY
Trigger: GTATTCAACATAGTGGGCCAACATCAGTGGGAATTT...ACAGACCAATGTAGAAATCTGCCTCAACAGAGAAAATAATGTATAGTGGATTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR-3UTR CAA 90 bp GTAATCCACTATACATTATTTTCTCTGTTGAGGCAGATTTCTACATTGGTCTGTCAGGTTAGTAAGTGCTaGCAAAAAGTGTTGCAAAAA +
Preference number: 3 (lower is better)
Translates to: VIHYTLFSLLRQISTLVCQVSKC*QKVLQK
Trigger: TTTTTGCAACACTTTTTGCAAGCACTTACTAACCTG...ACAGACCAATGTAGAAATCTGCCTCAACAGAGAAAATAATGTATAGTGGATTAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR TCA 72 bp CTCCCACTGTCTGTGGTTGTATGTTATTTACTTCCTTaGACATCTGTTCTGGAAGTTTATAAAATGGAACAA +
Preference number: 3 (lower is better)
Translates to: LPLSVVVCYLLP*TSVLEVYKMEQ
Trigger: TTGTTCCATTTTATAAACTTCCAGAACAGATGTTCAAGGAAGTAAATAACATACAACCACAGACAGTGGGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CCA 90 bp ACATGGTTGGGGAGGCCTCAGGAAACTTACAATCATGGCAGGAGGCGAAGGGGACATCTGCATCTGATGTaGCACGAGGCTGCTTCGTCC +
Preference number: 4 (lower is better)
Translates to: TWLGRPQETYNHGRRRRGHLHLM*HEAASS
Trigger: GGACGAAGCAGCCTCGTGCCACATCAGATGCAGATG...TCCCCTTCGCCTCCTGCCATGATTGTAAGTTTCCTGAGGCCTCCCCAACCATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR TCA 90 bp ACATGGTTGGGGAGGCCTCAGGAAACTTACAATCATGGCAGGAGGCGAAGGGGAAAAGCCAGGATAAGATaGCAGGAGAGCCCTAGGCAC +
Preference number: 4 (lower is better)
Translates to: TWLGRPQETYNHGRRRRGKARIR*QESPRH
Trigger: GTGCCTAGGGCTCTCCTGTCATCTTATCCTGGCTTT...TCCCCTTCGCCTCCTGCCATGATTGTAAGTTTCCTGAGGCCTCCCCAACCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR TCA 90 bp CAGAGCCAGACCATATCACCTGCTTACCCTTTTCTCACTGCTCTGGCTGCTCAGAGGGAACTGGGACTTTaGCCTCTGCTCTCCCACTGT +
Preference number: 4 (lower is better)
Translates to: QSQTISPAYPFLTALAAQRELGL*PLLSHC
Trigger: ACAGTGGGAGAGCAGAGGTCAAAGTCCCAGTTCCCT...CTGAGCAGCCAGAGCAGTGAGAAAAGGGTAAGCAGGTGATATGGTCTGGCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR TCA 90 bp GTGTATGGCCTTAGAGCACTGACCATATGCACAGATGCAGATACCCAAGCGCCTGACCACATCTGCATCTaGTGTGGCACGAGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: VYGLRALTICTDADTQAPDHICI*CGTRLL
Trigger: AAGCAGCCTCGTGCCACATCAGATGCAGATGTGGTC...AGGCGCTTGGGTATCTGCATCTGTGCATATGGTCAGTGCTCTAAGGCCATACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR GCA 90 bp ACATGGTTGGGGAGGCCTCAGGAAACTTACAATCATGGCAGGAGGCGAAGGGGATTACCCTTTTCTCACTaGTCTGGCTGCTCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: TWLGRPQETYNHGRRRRGLPFSH*SGCSVS
Trigger: AGAGACTGAGCAGCCAGAGCAGTGAGAAAAGGGTAA...TCCCCTTCGCCTCCTGCCATGATTGTAAGTTTCCTGAGGCCTCCCCAACCATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CCA 90 bp CAGAGCCAGACCATATCACCTGCTTACCCTTTTCTCACTGCTCTGGCTGCTCAGCATAGGCTTGTGCAGTaGCCGATTTTGCAGCACCAA +
Preference number: 4 (lower is better)
Translates to: QSQTISPAYPFLTALAAQHRLVQ*PILQHQ
Trigger: TTGGTGCTGCAAAATCGGCCACTGCACAAGCCTATG...CTGAGCAGCCAGAGCAGTGAGAAAAGGGTAAGCAGGTGATATGGTCTGGCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CCA 90 bp ACATGGTTGGGGAGGCCTCAGGAAACTTACAATCATGGCAGGAGGCGAAGGGGATCAGATCTGCTGGCCTaGCAATATGCCAGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: TWLGRPQETYNHGRRRRGSDLLA*QYASFF
Trigger: GAAGAAACTGGCATATTGCCAGGCCAGCAGATCTGA...TCCCCTTCGCCTCCTGCCATGATTGTAAGTTTCCTGAGGCCTCCCCAACCATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CCA 90 bp ACATGGTTGGGGAGGCCTCAGGAAACTTACAATCATGGCAGGAGGCGAAGGGGAACTAGTCAGATCTGCTaGCCTGGCAATATGCCAGTT +
Preference number: 4 (lower is better)
Translates to: TWLGRPQETYNHGRRRRGTSQIC*PGNMPV
Trigger: AACTGGCATATTGCCAGGCCAGCAGATCTGACTAGT...TCCCCTTCGCCTCCTGCCATGATTGTAAGTTTCCTGAGGCCTCCCCAACCATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR GCA 90 bp GTATTTCTTGGCTTGTGGATGCAGAACTCCAATCTCTATCTCTACCTTCACATCGATGTGGCACGAGGCTaGTTCGTCCAGCACCCTGGG +
Preference number: 4 (lower is better)
Translates to: VFLGLWMQNSNLYLYLHIDVARG*FVQHPG
Trigger: CCCAGGGTGCTGGACGAAGCAGCCTCGTGCCACATC...GATGTGAAGGTAGAGATAGAGATTGGAGTTCTGCATCCACAAGCCAAGAAATAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR GCA 90 bp ACATGGTTGGGGAGGCCTCAGGAAACTTACAATCATGGCAGGAGGCGAAGGGGAAGAGCACTGACCATATaGACAGATGCAGATACCCAA +
Preference number: 4 (lower is better)
Translates to: TWLGRPQETYNHGRRRRGRALTI*TDADTQ
Trigger: TTGGGTATCTGCATCTGTGCATATGGTCAGTGCTCT...TCCCCTTCGCCTCCTGCCATGATTGTAAGTTTCCTGAGGCCTCCCCAACCATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CCA 90 bp CAGAGCCAGACCATATCACCTGCTTACCCTTTTCTCACTGCTCTGGCTGCTCAGGGAATATCAGAAACATaGCTGCCCGCATACTCAAGC +
Preference number: 4 (lower is better)
Translates to: QSQTISPAYPFLTALAAQGISET*LPAYSS
Trigger: GCTTGAGTATGCGGGCAGCCATGTTTCTGATATTCC...CTGAGCAGCCAGAGCAGTGAGAAAAGGGTAAGCAGGTGATATGGTCTGGCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CCA 90 bp CTTACCCTTTTCTCACTGCTCTGGCTGCTCAGTCTCTTCAATGTCCCTCAAACAGCCCATGGCTCATTATaGTTGGGTAGTGGAGTGGGC +
Preference number: 4 (lower is better)
Translates to: LTLFSLLWLLSLFNVPQTAHGSL*LGSGVG
Trigger: GCCCACTCCACTACCCAACCATAATGAGCCATGGGC...TGTTTGAGGGACATTGAAGAGACTGAGCAGCCAGAGCAGTGAGAAAAGGGTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CCA 90 bp GTGTATGGCCTTAGAGCACTGACCATATGCACAGATGCAGATACCCAAGCGCCTCCTAGAAAGAGTGACTaGGTACAGATTGCCCCACTG +
Preference number: 4 (lower is better)
Translates to: VYGLRALTICTDADTQAPPRKSD*VQIAPL
Trigger: CAGTGGGGCAATCTGTACCCAGTCACTCTTTCTAGG...AGGCGCTTGGGTATCTGCATCTGTGCATATGGTCAGTGCTCTAAGGCCATACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR TCA 90 bp CTTACCCTTTTCTCACTGCTCTGGCTGCTCAGTCTCTTCAATGTCCCTCAAACAAAAGCCAGGATAAGATaGCAGGAGAGCCCTAGGCAC +
Preference number: 4 (lower is better)
Translates to: LTLFSLLWLLSLFNVPQTKARIR*QESPRH
Trigger: GTGCCTAGGGCTCTCCTGTCATCTTATCCTGGCTTT...TGTTTGAGGGACATTGAAGAGACTGAGCAGCCAGAGCAGTGAGAAAAGGGTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR GCA 90 bp GACCATATCACCTGCTTACCCTTTTCTCACTGCTCTGGCTGCTCAGTCTCTTCAATATGGTGGCCAGAATaGATCCGTAGGACAGGACAG +
Preference number: 4 (lower is better)
Translates to: DHITCLPFSHCSGCSVSSIWWPE*IRRTGQ
Trigger: CTGTCCTGTCCTACGGATGCATTCTGGCCACCATAT...TGAAGAGACTGAGCAGCCAGAGCAGTGAGAAAAGGGTAAGCAGGTGATATGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR GCA 90 bp ACATGGTTGGGGAGGCCTCAGGAAACTTACAATCATGGCAGGAGGCGAAGGGGAATCCATAGCACTTATTaGCACCCAAATTGGGATGTG +
Preference number: 4 (lower is better)
Translates to: TWLGRPQETYNHGRRRRGIHSTY*HPNWDV
Trigger: CACATCCCAATTTGGGTGGCAATAAGTGCTATGGAT...TCCCCTTCGCCTCCTGCCATGATTGTAAGTTTCCTGAGGCCTCCCCAACCATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CCA 90 bp GACCATATCACCTGCTTACCCTTTTCTCACTGCTCTGGCTGCTCAGTCTCTTCACATAGGCTTGTGCAGTaGCCGATTTTGCAGCACCAA +
Preference number: 4 (lower is better)
Translates to: DHITCLPFSHCSGCSVSSHRLVQ*PILQHQ
Trigger: TTGGTGCTGCAAAATCGGCCACTGCACAAGCCTATG...TGAAGAGACTGAGCAGCCAGAGCAGTGAGAAAAGGGTAAGCAGGTGATATGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CCA 90 bp CTTAGAAAGATGGGAAATCAGGAAGCTACCACCTATTTTGTTGGCCCCAGAGCTGCCCATGGCTCATTATaGTTGGGTAGTGGAGTGGGC +
Preference number: 4 (lower is better)
Translates to: LRKMGNQEATTYFVGPRAAHGSL*LGSGVG
Trigger: GCCCACTCCACTACCCAACCATAATGAGCCATGGGC...AGCTCTGGGGCCAACAAAATAGGTGGTAGCTTCCTGATTTCCCATCTTTCTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CCA 90 bp CTTACCCTTTTCTCACTGCTCTGGCTGCTCAGTCTCTTCAATGTCCCTCAAACAAGATGCCAAAGCCAATaGCCCAGGAACCAAGAGCGA +
Preference number: 4 (lower is better)
Translates to: LTLFSLLWLLSLFNVPQTRCQSQ*PRNQER
Trigger: TCGCTCTTGGTTCCTGGGCCATTGGCTTTGGCATCT...TGTTTGAGGGACATTGAAGAGACTGAGCAGCCAGAGCAGTGAGAAAAGGGTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR TCA 90 bp CCTGTGCACTTAGGTATTCCTTCCACAAAGGGGAAGGAGCTCAATGTTCCATCTGGGCAGTGTCCTAACTaGGTCGTTAAAGGAGAAAGG +
Preference number: 4 (lower is better)
Translates to: PVHLGIPSTKGKELNVPSGQCPN*VVKGER
Trigger: CCTTTCTCCTTTAACGACTCAGTTAGGACACTGCCC...AGATGGAACATTGAGCTCCTTCCCCTTTGTGGAAGGAATACCTAAGTGCACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR GCA 90 bp CCTGTGCACTTAGGTATTCCTTCCACAAAGGGGAAGGAGCTCAATGTTCCATCTTATCAGAAACATGGCTaGCCGCATACTCAAGCTCCC +
Preference number: 4 (lower is better)
Translates to: PVHLGIPSTKGKELNVPSYQKHG*PHTQAP
Trigger: GGGAGCTTGAGTATGCGGGCAGCCATGTTTCTGATA...AGATGGAACATTGAGCTCCTTCCCCTTTGTGGAAGGAATACCTAAGTGCACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR GCA 90 bp CCTGTGCACTTAGGTATTCCTTCCACAAAGGGGAAGGAGCTCAATGTTCCATCTGTGGAGAACGCTTTCTaGTTTCCTGTGGGCATGCAT +
Preference number: 4 (lower is better)
Translates to: PVHLGIPSTKGKELNVPSVENAF*FPVGMH
Trigger: ATGCATGCCCACAGGAAAGCAGAAAGCGTTCTCCAC...AGATGGAACATTGAGCTCCTTCCCCTTTGTGGAAGGAATACCTAAGTGCACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CCA 90 bp GTGTATGGCCTTAGAGCACTGACCATATGCACAGATGCAGATACCCAAGCGCCTTTGGTGACTCGTGTCTaGTTCTCCAACTCCATATTG +
Preference number: 4 (lower is better)
Translates to: VYGLRALTICTDADTQAPLVTRV*FSNSIL
Trigger: CAATATGGAGTTGGAGAACCAGACACGAGTCACCAA...AGGCGCTTGGGTATCTGCATCTGTGCATATGGTCAGTGCTCTAAGGCCATACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CCA 90 bp GACCATATCACCTGCTTACCCTTTTCTCACTGCTCTGGCTGCTCAGTCTCTTCATCAGATCTGCTGGCCTaGCAATATGCCAGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: DHITCLPFSHCSGCSVSSSDLLA*QYASFF
Trigger: GAAGAAACTGGCATATTGCCAGGCCAGCAGATCTGA...TGAAGAGACTGAGCAGCCAGAGCAGTGAGAAAAGGGTAAGCAGGTGATATGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CCA 90 bp CTTACCCTTTTCTCACTGCTCTGGCTGCTCAGTCTCTTCAATGTCCCTCAAACAGAAAGACCCAGGGTTTaGATTCAGGGAACTGGGACT +
Preference number: 4 (lower is better)
Translates to: LTLFSLLWLLSLFNVPQTERPRV*IQGTGT
Trigger: AGTCCCAGTTCCCTGAATCCAAACCCTGGGTCTTTC...TGTTTGAGGGACATTGAAGAGACTGAGCAGCCAGAGCAGTGAGAAAAGGGTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CCA 90 bp CTTACCCTTTTCTCACTGCTCTGGCTGCTCAGTCTCTTCAATGTCCCTCAAACAACTTACAGTTCCACATaGTTGGGGAGGCCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: LTLFSLLWLLSLFNVPQTTYSST*LGRPQE
Trigger: TTCCTGAGGCCTCCCCAACCATGTGGAACTGTAAGT...TGTTTGAGGGACATTGAAGAGACTGAGCAGCCAGAGCAGTGAGAAAAGGGTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CCA 90 bp CCTGTGCACTTAGGTATTCCTTCCACAAAGGGGAAGGAGCTCAATGTTCCATCTACTTACAGTTCCACATaGTTGGGGAGGCCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: PVHLGIPSTKGKELNVPSTYSST*LGRPQE
Trigger: TTCCTGAGGCCTCCCCAACCATGTGGAACTGTAAGT...AGATGGAACATTGAGCTCCTTCCCCTTTGTGGAAGGAATACCTAAGTGCACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR TCA 90 bp ACATGGTTGGGGAGGCCTCAGGAAACTTACAATCATGGCAGGAGGCGAAGGGGACATGAAAATAATGGCTaGATAGAAAATGGTGACCAC +
Preference number: 4 (lower is better)
Translates to: TWLGRPQETYNHGRRRRGHENNG*IENGDH
Trigger: GTGGTCACCATTTTCTATTCAGCCATTATTTTCATG...TCCCCTTCGCCTCCTGCCATGATTGTAAGTTTCCTGAGGCCTCCCCAACCATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR TCA 90 bp CAGAGCCAGACCATATCACCTGCTTACCCTTTTCTCACTGCTCTGGCTGCTCAGATAGGTAAGGAAAGTTaGGAATCACTATGGCATGGA +
Preference number: 4 (lower is better)
Translates to: QSQTISPAYPFLTALAAQIGKES*ESLWHG
Trigger: TCCATGCCATAGTGATTCTCAACTTTCCTTACCTAT...CTGAGCAGCCAGAGCAGTGAGAAAAGGGTAAGCAGGTGATATGGTCTGGCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR GCA 90 bp CTTACCCTTTTCTCACTGCTCTGGCTGCTCAGTCTCTTCAATGTCCCTCAAACAAAGTACATAGGCTTGTaGAGTGGCCGATTTTGCAGC +
Preference number: 4 (lower is better)
Translates to: LTLFSLLWLLSLFNVPQTKYIGL*SGRFCS
Trigger: GCTGCAAAATCGGCCACTGCACAAGCCTATGTACTT...TGTTTGAGGGACATTGAAGAGACTGAGCAGCCAGAGCAGTGAGAAAAGGGTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR GCA 90 bp CTTACCCTTTTCTCACTGCTCTGGCTGCTCAGTCTCTTCAATGTCCCTCAAACATACAGATTGCCCCACTaGTTTCAAGCTGAAAGCCAG +
Preference number: 4 (lower is better)
Translates to: LTLFSLLWLLSLFNVPQTYRLPH*FQAESQ
Trigger: CTGGCTTTCAGCTTGAAAGCAGTGGGGCAATCTGTA...TGTTTGAGGGACATTGAAGAGACTGAGCAGCCAGAGCAGTGAGAAAAGGGTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR GCA 90 bp CAGAGCCAGACCATATCACCTGCTTACCCTTTTCTCACTGCTCTGGCTGCTCAGGATCCTCATAACCATTaGGTAAGAAACACCAAGCAA +
Preference number: 4 (lower is better)
Translates to: QSQTISPAYPFLTALAAQDPHNH*VRNTKQ
Trigger: TTGCTTGGTGTTTCTTACGCAATGGTTATGAGGATC...CTGAGCAGCCAGAGCAGTGAGAAAAGGGTAAGCAGGTGATATGGTCTGGCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR GCA 90 bp CTTACCCTTTTCTCACTGCTCTGGCTGCTCAGTCTCTTCAATGTCCCTCAAACAAATCTAGTGGCAGCTTaGTTAGATCATGCACTGCCC +
Preference number: 4 (lower is better)
Translates to: LTLFSLLWLLSLFNVPQTNLVAA*LDHALP
Trigger: GGGCAGTGCATGATCTAAGCAAGCTGCCACTAGATT...TGTTTGAGGGACATTGAAGAGACTGAGCAGCCAGAGCAGTGAGAAAAGGGTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR GCA 90 bp CTTACCCTTTTCTCACTGCTCTGGCTGCTCAGTCTCTTCAATGTCCCTCAAACATTACCCTTTTCTCACTaGTCTGGCTGCTCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: LTLFSLLWLLSLFNVPQTLPFSH*SGCSVS
Trigger: AGAGACTGAGCAGCCAGAGCAGTGAGAAAAGGGTAA...TGTTTGAGGGACATTGAAGAGACTGAGCAGCCAGAGCAGTGAGAAAAGGGTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CCA 90 bp CTTACCCTTTTCTCACTGCTCTGGCTGCTCAGTCTCTTCAATGTCCCTCAAACATGGGCATGCATAATATaGTGGCCAGAATGCATCCGT +
Preference number: 4 (lower is better)
Translates to: LTLFSLLWLLSLFNVPQTWACII*WPECIR
Trigger: ACGGATGCATTCTGGCCACCATATTATGCATGCCCA...TGTTTGAGGGACATTGAAGAGACTGAGCAGCCAGAGCAGTGAGAAAAGGGTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CCA 90 bp CCTGTGCACTTAGGTATTCCTTCCACAAAGGGGAAGGAGCTCAATGTTCCATCTACTAGTCAGATCTGCTaGCCTGGCAATATGCCAGTT +
Preference number: 4 (lower is better)
Translates to: PVHLGIPSTKGKELNVPSTSQIC*PGNMPV
Trigger: AACTGGCATATTGCCAGGCCAGCAGATCTGACTAGT...AGATGGAACATTGAGCTCCTTCCCCTTTGTGGAAGGAATACCTAAGTGCACAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CCA 90 bp GTGTATGGCCTTAGAGCACTGACCATATGCACAGATGCAGATACCCAAGCGCCTGGCAGATTTCTACATTaGTCTGTGTCCTTACTTTGC +
Preference number: 4 (lower is better)
Translates to: VYGLRALTICTDADTQAPGRFLH*SVSLLC
Trigger: GCAAAGTAAGGACACAGACCAATGTAGAAATCTGCC...AGGCGCTTGGGTATCTGCATCTGTGCATATGGTCAGTGCTCTAAGGCCATACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CCA 90 bp CTTAGAAAGATGGGAAATCAGGAAGCTACCACCTATTTTGTTGGCCCCAGAGCTTCTTCCAGCTTCTGGTaGCCCAAGGTATTTCTTGGC +
Preference number: 4 (lower is better)
Translates to: LRKMGNQEATTYFVGPRASSSFW*PKVFLG
Trigger: GCCAAGAAATACCTTGGGCCACCAGAAGCTGGAAGA...AGCTCTGGGGCCAACAAAATAGGTGGTAGCTTCCTGATTTCCCATCTTTCTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CCA 90 bp ACATGGTTGGGGAGGCCTCAGGAAACTTACAATCATGGCAGGAGGCGAAGGGGATATTGCCACCCAAATTaGGATGTGTATTTATTTCCC +
Preference number: 4 (lower is better)
Translates to: TWLGRPQETYNHGRRRRGYCHPN*DVYLFP
Trigger: GGGAAATAAATACACATCCCAATTTGGGTGGCAATA...TCCCCTTCGCCTCCTGCCATGATTGTAAGTTTCCTGAGGCCTCCCCAACCATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR TCA 90 bp CAGAGCCAGACCATATCACCTGCTTACCCTTTTCTCACTGCTCTGGCTGCTCAGAAAAGATTCAGGTATTaGATAGATGTGAGGAACCCA +
Preference number: 4 (lower is better)
Translates to: QSQTISPAYPFLTALAAQKRFRY*IDVRNP
Trigger: TGGGTTCCTCACATCTATTCAATACCTGAATCTTTT...CTGAGCAGCCAGAGCAGTGAGAAAAGGGTAAGCAGGTGATATGGTCTGGCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR TCA 90 bp CCTGTGCACTTAGGTATTCCTTCCACAAAGGGGAAGGAGCTCAATGTTCCATCTTGGGGTCACAACCATTaGGAACTGTTTTCTCTAGCT +
Preference number: 4 (lower is better)
Translates to: PVHLGIPSTKGKELNVPSWGHNH*ELFSLA
Trigger: AGCTAGAGAAAACAGTTCTCAATGGTTGTGACCCCA...AGATGGAACATTGAGCTCCTTCCCCTTTGTGGAAGGAATACCTAAGTGCACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR TCA 90 bp GTGTATGGCCTTAGAGCACTGACCATATGCACAGATGCAGATACCCAAGCGCCTTACTTATCTCTGAGTTaGGTGTGGAGAAAGTGGAAA +
Preference number: 4 (lower is better)
Translates to: VYGLRALTICTDADTQAPYLSLS*VWRKWK
Trigger: TTTCCACTTTCTCCACACTCAACTCAGAGATAAGTA...AGGCGCTTGGGTATCTGCATCTGTGCATATGGTCAGTGCTCTAAGGCCATACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR TCA 90 bp GACCATATCACCTGCTTACCCTTTTCTCACTGCTCTGGCTGCTCAGTCTCTTCACCTGTTACTTATCTCTaGGTTGAGTGTGGAGAAAGT +
Preference number: 4 (lower is better)
Translates to: DHITCLPFSHCSGCSVSSPVTYL*VECGES
Trigger: ACTTTCTCCACACTCAACTCAGAGATAAGTAACAGG...TGAAGAGACTGAGCAGCCAGAGCAGTGAGAAAAGGGTAAGCAGGTGATATGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR GCA 90 bp CTACCAGCCTTTTATGATGGTTACCCCAACAAGATCACCAAATGCCCTGAAACTTATCAGAAACATGGCTaGCCGCATACTCAAGCTCCC +
Preference number: 4 (lower is better)
Translates to: LPAFYDGYPNKITKCPETYQKHG*PHTQAP
Trigger: GGGAGCTTGAGTATGCGGGCAGCCATGTTTCTGATA...AGTTTCAGGGCATTTGGTGATCTTGTTGGGGTAACCATCATAAAAGGCTGGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CCA 90 bp ACTACTGAAACTGACTACCAGCCTTTTATGATGGTTACCCCAACAAGATCACCAAGATGCCAAAGCCAATaGCCCAGGAACCAAGAGCGA +
Preference number: 4 (lower is better)
Translates to: TTETDYQPFMMVTPTRSPRCQSQ*PRNQER
Trigger: TCGCTCTTGGTTCCTGGGCCATTGGCTTTGGCATCT...TGGTGATCTTGTTGGGGTAACCATCATAAAAGGCTGGTAGTCAGTTTCAGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR TCA 90 bp AACCAAGAGCAAGCATATCTATGTACCTTCTATGGGTGTAAAGCACATTTGATCGACCACATCTGCATCTaGTGTGGCACGAGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: NQEQAYLCTFYGCKAHLIDHICI*CGTRLL
Trigger: AAGCAGCCTCGTGCCACATCAGATGCAGATGTGGTC...GATCAAATGTGCTTTACACCCATAGAAGGTACATAGATATGCTTGCTCTTGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR TCA 90 bp CCTGTGCACTTAGGTATTCCTTCCACAAAGGGGAAGGAGCTCAATGTTCCATCTCAGCCTCTGATAGGATaGAATGTGAAAACAAAGCCT +
Preference number: 4 (lower is better)
Translates to: PVHLGIPSTKGKELNVPSQPLIG*NVKTKP
Trigger: AGGCTTTGTTTTCACATTTCATCCTATCAGAGGCTG...AGATGGAACATTGAGCTCCTTCCCCTTTGTGGAAGGAATACCTAAGTGCACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR TCA 90 bp CTTAGAAAGATGGGAAATCAGGAAGCTACCACCTATTTTGTTGGCCCCAGAGCTTGGGGTCACAACCATTaGGAACTGTTTTCTCTAGCT +
Preference number: 4 (lower is better)
Translates to: LRKMGNQEATTYFVGPRAWGHNH*ELFSLA
Trigger: AGCTAGAGAAAACAGTTCTCAATGGTTGTGACCCCA...AGCTCTGGGGCCAACAAAATAGGTGGTAGCTTCCTGATTTCCCATCTTTCTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR TCA 90 bp CCTGTGCACTTAGGTATTCCTTCCACAAAGGGGAAGGAGCTCAATGTTCCATCTAGCACATTTGATCAATaGGGTTCTAGCGTGTGTGTA +
Preference number: 4 (lower is better)
Translates to: PVHLGIPSTKGKELNVPSSTFDQ*GSSVCV
Trigger: TACACACACGCTAGAACCTCATTGATCAAATGTGCT...AGATGGAACATTGAGCTCCTTCCCCTTTGTGGAAGGAATACCTAAGTGCACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR TCA 90 bp CCTGTGCACTTAGGTATTCCTTCCACAAAGGGGAAGGAGCTCAATGTTCCATCTCCAATGGCAAAACTATaGACCAAGAGCAAGCATATC +
Preference number: 4 (lower is better)
Translates to: PVHLGIPSTKGKELNVPSPMAKL*TKSKHI
Trigger: GATATGCTTGCTCTTGGTTCATAGTTTTGCCATTGG...AGATGGAACATTGAGCTCCTTCCCCTTTGTGGAAGGAATACCTAAGTGCACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR TCA 90 bp TTCATCACAACTTACTTGTTGCATCAAGGGACCAAACTACATTCCAGAAGCAAAAGGGAACTGGGACTTTaGCCTCTGCTCTCCCACTGT +
Preference number: 4 (lower is better)
Translates to: FITTYLLHQGTKLHSRSKRELGL*PLLSHC
Trigger: ACAGTGGGAGAGCAGAGGTCAAAGTCCCAGTTCCCT...TTTGCTTCTGGAATGTAGTTTGGTCCCTTGATGCAACAAGTAAGTTGTGATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR TCA 90 bp AGGTATTTCTTGGCTTGTGGATGCAGAACTCCAATCTCTATCTCTACCTTCACAGATCACCAAATGCCCTaGAACTTCCGGCTTGCTTTG +
Preference number: 4 (lower is better)
Translates to: RYFLACGCRTPISISTFTDHQMP*NFRLAL
Trigger: CAAAGCAAGCCGGAAGTTTCAGGGCATTTGGTGATC...TGTGAAGGTAGAGATAGAGATTGGAGTTCTGCATCCACAAGCCAAGAAATACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR TCA 90 bp ACTACTGAAACTGACTACCAGCCTTTTATGATGGTTACCCCAACAAGATCACCAGATCACCAAATGCCCTaGAACTTCCGGCTTGCTTTG +
Preference number: 4 (lower is better)
Translates to: TTETDYQPFMMVTPTRSPDHQMP*NFRLAL
Trigger: CAAAGCAAGCCGGAAGTTTCAGGGCATTTGGTGATC...TGGTGATCTTGTTGGGGTAACCATCATAAAAGGCTGGTAGTCAGTTTCAGTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR GCA 90 bp GTATTTCTTGGCTTGTGGATGCAGAACTCCAATCTCTATCTCTACCTTCACATCGTGGAGAACGCTTTCTaGTTTCCTGTGGGCATGCAT +
Preference number: 4 (lower is better)
Translates to: VFLGLWMQNSNLYLYLHIVENAF*FPVGMH
Trigger: ATGCATGCCCACAGGAAAGCAGAAAGCGTTCTCCAC...GATGTGAAGGTAGAGATAGAGATTGGAGTTCTGCATCCACAAGCCAAGAAATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CCA 90 bp AGGTATTTCTTGGCTTGTGGATGCAGAACTCCAATCTCTATCTCTACCTTCACAGAAAGACCCAGGGTTTaGATTCAGGGAACTGGGACT +
Preference number: 4 (lower is better)
Translates to: RYFLACGCRTPISISTFTERPRV*IQGTGT
Trigger: AGTCCCAGTTCCCTGAATCCAAACCCTGGGTCTTTC...TGTGAAGGTAGAGATAGAGATTGGAGTTCTGCATCCACAAGCCAAGAAATACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CCA 90 bp GACCATATCACCTGCTTACCCTTTTCTCACTGCTCTGGCTGCTCAGTCTCTTCATTCCAAAAGTATAGATaGTTTGGCCAAGGTCACATG +
Preference number: 4 (lower is better)
Translates to: DHITCLPFSHCSGCSVSSFQKYR*FGQGHM
Trigger: CATGTGACCTTGGCCAAACCATCTATACTTTTGGAA...TGAAGAGACTGAGCAGCCAGAGCAGTGAGAAAAGGGTAAGCAGGTGATATGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CCA 90 bp CTTACCCTTTTCTCACTGCTCTGGCTGCTCAGTCTCTTCAATGTCCCTCAAACAGGCAGATTTCTACATTaGTCTGTGTCCTTACTTTGC +
Preference number: 4 (lower is better)
Translates to: LTLFSLLWLLSLFNVPQTGRFLH*SVSLLC
Trigger: GCAAAGTAAGGACACAGACCAATGTAGAAATCTGCC...TGTTTGAGGGACATTGAAGAGACTGAGCAGCCAGAGCAGTGAGAAAAGGGTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CCA 90 bp CTTACCCTTTTCTCACTGCTCTGGCTGCTCAGTCTCTTCAATGTCCCTCAAACAATATCTTCCAGCTTCTaGTGGCCCAAGGTATTTCTT +
Preference number: 4 (lower is better)
Translates to: LTLFSLLWLLSLFNVPQTISSSF*WPKVFL
Trigger: AAGAAATACCTTGGGCCACCAGAAGCTGGAAGATAT...TGTTTGAGGGACATTGAAGAGACTGAGCAGCCAGAGCAGTGAGAAAAGGGTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CCA 90 bp CTTAGAAAGATGGGAAATCAGGAAGCTACCACCTATTTTGTTGGCCCCAGAGCTCTTTTCTCACTGCTCTaGCTGCTCAGTCTCTTCAAT +
Preference number: 4 (lower is better)
Translates to: LRKMGNQEATTYFVGPRALFSLL*LLSLFN
Trigger: ATTGAAGAGACTGAGCAGCCAGAGCAGTGAGAAAAG...AGCTCTGGGGCCAACAAAATAGGTGGTAGCTTCCTGATTTCCCATCTTTCTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CCA 90 bp GTATTTCTTGGCTTGTGGATGCAGAACTCCAATCTCTATCTCTACCTTCACATCGAGAGAGAGAGAAAGTaGGAGGGGAACTGCCAAACA +
Preference number: 4 (lower is better)
Translates to: VFLGLWMQNSNLYLYLHIERERK*EGNCQT
Trigger: TGTTTGGCAGTTCCCCTCCCACTTTCTCTCTCTCTC...GATGTGAAGGTAGAGATAGAGATTGGAGTTCTGCATCCACAAGCCAAGAAATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CCA 90 bp ACTACTGAAACTGACTACCAGCCTTTTATGATGGTTACCCCAACAAGATCACCAGAGAGAGAGAGAAAGTaGGAGGGGAACTGCCAAACA +
Preference number: 4 (lower is better)
Translates to: TTETDYQPFMMVTPTRSPERERK*EGNCQT
Trigger: TGTTTGGCAGTTCCCCTCCCACTTTCTCTCTCTCTC...TGGTGATCTTGTTGGGGTAACCATCATAAAAGGCTGGTAGTCAGTTTCAGTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CCA 90 bp CTTTGCCAAAGTAGCCATATATCTTACTCTCACAGCTTCTCCAGGTTTTTGCTCGGAAACTTACAATCATaGCAGGAGGCGAAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: LCQSSHISYSHSFSRFLLGNLQS*QEAKGK
Trigger: CTTCCCCTTCGCCTCCTGCCATGATTGTAAGTTTCC...GAGCAAAAACCTGGAGAAGCTGTGAGAGTAAGATATATGGCTACTTTGGCAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CCA 90 bp GTATTTCTTGGCTTGTGGATGCAGAACTCCAATCTCTATCTCTACCTTCACATCACAGTTCCACATGGTTaGGGAGGCCTCAGGAAACTT +
Preference number: 4 (lower is better)
Translates to: VFLGLWMQNSNLYLYLHITVPHG*GGLRKL
Trigger: AAGTTTCCTGAGGCCTCCCCAACCATGTGGAACTGT...GATGTGAAGGTAGAGATAGAGATTGGAGTTCTGCATCCACAAGCCAAGAAATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR TCA 90 bp CCTGTGCACTTAGGTATTCCTTCCACAAAGGGGAAGGAGCTCAATGTTCCATCTGTATCATACAGAGTGTaGAAGAGATGCTGTTGTTCA +
Preference number: 4 (lower is better)
Translates to: PVHLGIPSTKGKELNVPSVSYRV*KRCCCS
Trigger: TGAACAACAGCATCTCTTTCACACTCTGTATGATAC...AGATGGAACATTGAGCTCCTTCCCCTTTGTGGAAGGAATACCTAAGTGCACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR TCA 90 bp CTTACCCTTTTCTCACTGCTCTGGCTGCTCAGTCTCTTCAATGTCCCTCAAACAATAGGTAAGGAAAGTTaGGAATCACTATGGCATGGA +
Preference number: 4 (lower is better)
Translates to: LTLFSLLWLLSLFNVPQTIGKES*ESLWHG
Trigger: TCCATGCCATAGTGATTCTCAACTTTCCTTACCTAT...TGTTTGAGGGACATTGAAGAGACTGAGCAGCCAGAGCAGTGAGAAAAGGGTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR TCA 90 bp ACTACTGAAACTGACTACCAGCCTTTTATGATGGTTACCCCAACAAGATCACCAGTGTCCTTACTTTGCTaGGCCTGTGCACTTAGGTAT +
Preference number: 4 (lower is better)
Translates to: TTETDYQPFMMVTPTRSPVSLLC*ACALRY
Trigger: ATACCTAAGTGCACAGGCTCAGCAAAGTAAGGACAC...TGGTGATCTTGTTGGGGTAACCATCATAAAAGGCTGGTAGTCAGTTTCAGTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR TCA 90 bp CTTACCCTTTTCTCACTGCTCTGGCTGCTCAGTCTCTTCAATGTCCCTCAAACATTCTTCCTCACTTGGTaGTTCTGTGACCATCTTATT +
Preference number: 4 (lower is better)
Translates to: LTLFSLLWLLSLFNVPQTFFLTW*FCDHLI
Trigger: AATAAGATGGTCACAGAATCACCAAGTGAGGAAGAA...TGTTTGAGGGACATTGAAGAGACTGAGCAGCCAGAGCAGTGAGAAAAGGGTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR GCA 90 bp AGGTATTTCTTGGCTTGTGGATGCAGAACTCCAATCTCTATCTCTACCTTCACATGCAGTGGCCGATTTTaGAGCACCAATAGGATGATG +
Preference number: 4 (lower is better)
Translates to: RYFLACGCRTPISISTFTCSGRF*STNRMM
Trigger: CATCATCCTATTGGTGCTGCAAAATCGGCCACTGCA...TGTGAAGGTAGAGATAGAGATTGGAGTTCTGCATCCACAAGCCAAGAAATACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR GCA 90 bp GTATTTCTTGGCTTGTGGATGCAGAACTCCAATCTCTATCTCTACCTTCACATCTGCAGTGGCCGATTTTaGAGCACCAATAGGATGATG +
Preference number: 4 (lower is better)
Translates to: VFLGLWMQNSNLYLYLHICSGRF*STNRMM
Trigger: CATCATCCTATTGGTGCTGCAAAATCGGCCACTGCA...GATGTGAAGGTAGAGATAGAGATTGGAGTTCTGCATCCACAAGCCAAGAAATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR GCA 90 bp GTATTTCTTGGCTTGTGGATGCAGAACTCCAATCTCTATCTCTACCTTCACATCGCTTTCCTGTGGGCATaGATAATATGGTGGCCAGAA +
Preference number: 4 (lower is better)
Translates to: VFLGLWMQNSNLYLYLHIAFLWA*IIWWPE
Trigger: TTCTGGCCACCATATTATGCATGCCCACAGGAAAGC...GATGTGAAGGTAGAGATAGAGATTGGAGTTCTGCATCCACAAGCCAAGAAATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR GCA 90 bp CTTTGCCAAAGTAGCCATATATCTTACTCTCACAGCTTCTCCAGGTTTTTGCTCGCTTTCCTGTGGGCATaGATAATATGGTGGCCAGAA +
Preference number: 4 (lower is better)
Translates to: LCQSSHISYSHSFSRFLLAFLWA*IIWWPE
Trigger: TTCTGGCCACCATATTATGCATGCCCACAGGAAAGC...GAGCAAAAACCTGGAGAAGCTGTGAGAGTAAGATATATGGCTACTTTGGCAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR GCA 90 bp AGGTATTTCTTGGCTTGTGGATGCAGAACTCCAATCTCTATCTCTACCTTCACATACAGATTGCCCCACTaGTTTCAAGCTGAAAGCCAG +
Preference number: 4 (lower is better)
Translates to: RYFLACGCRTPISISTFTYRLPH*FQAESQ
Trigger: CTGGCTTTCAGCTTGAAAGCAGTGGGGCAATCTGTA...TGTGAAGGTAGAGATAGAGATTGGAGTTCTGCATCCACAAGCCAAGAAATACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CCA 90 bp GTATTTCTTGGCTTGTGGATGCAGAACTCCAATCTCTATCTCTACCTTCACATCGGAATATCAGAAACATaGCTGCCCGCATACTCAAGC +
Preference number: 4 (lower is better)
Translates to: VFLGLWMQNSNLYLYLHIGISET*LPAYSS
Trigger: GCTTGAGTATGCGGGCAGCCATGTTTCTGATATTCC...GATGTGAAGGTAGAGATAGAGATTGGAGTTCTGCATCCACAAGCCAAGAAATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CCA 90 bp CTTTGCCAAAGTAGCCATATATCTTACTCTCACAGCTTCTCCAGGTTTTTGCTCGCATGCATAATATGGTaGCCAGAATGCATCCGTAGG +
Preference number: 4 (lower is better)
Translates to: LCQSSHISYSHSFSRFLLACIIW*PECIRR
Trigger: CCTACGGATGCATTCTGGCCACCATATTATGCATGC...GAGCAAAAACCTGGAGAAGCTGTGAGAGTAAGATATATGGCTACTTTGGCAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CCA 90 bp CTACCAGCCTTTTATGATGGTTACCCCAACAAGATCACCAAATGCCCTGAAACTTTCATGTTGAAGGCATaGATAACTCGAGGTCGAGCA +
Preference number: 4 (lower is better)
Translates to: LPAFYDGYPNKITKCPETFMLKA*ITRGRA
Trigger: TGCTCGACCTCGAGTTATCCATGCCTTCAACATGAA...AGTTTCAGGGCATTTGGTGATCTTGTTGGGGTAACCATCATAAAAGGCTGGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CCA 90 bp GACCATATCACCTGCTTACCCTTTTCTCACTGCTCTGGCTGCTCAGTCTCTTCACTAAAGGATACATTGTaGCACCTAGAAGGGAAATAT +
Preference number: 4 (lower is better)
Translates to: DHITCLPFSHCSGCSVSSLKDTL*HLEGKY
Trigger: ATATTTCCCTTCTAGGTGCCACAATGTATCCTTTAG...TGAAGAGACTGAGCAGCCAGAGCAGTGAGAAAAGGGTAAGCAGGTGATATGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CCA 90 bp CTTTGCCAAAGTAGCCATATATCTTACTCTCACAGCTTCTCCAGGTTTTTGCTCTTGGATTCAGGGAACTaGGACTTTGACCTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: LCQSSHISYSHSFSRFLLLDSGN*DFDLCS
Trigger: AGAGCAGAGGTCAAAGTCCCAGTTCCCTGAATCCAA...GAGCAAAAACCTGGAGAAGCTGTGAGAGTAAGATATATGGCTACTTTGGCAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR CAA 72 bp TTAGAAAGATGGGAAATCAGGAAGCTACCACCTATTTaGTTGGCCCCAGAGCTATTAGTGTATGGCAGATCC +
Preference number: 4 (lower is better)
Translates to: LERWEIRKLPPI*LAPELLVYGRS
Trigger: GGATCTGCCATACACTAATAGCTCTGGGGCCAACAAAATAGGTGGTAGCTTCCTGATTTCCCATCTTTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR TCA 90 bp CTACCAGCCTTTTATGATGGTTACCCCAACAAGATCACCAAATGCCCTGAAACTCAGCCTCTGATAGGATaGAATGTGAAAACAAAGCCT +
Preference number: 4 (lower is better)
Translates to: LPAFYDGYPNKITKCPETQPLIG*NVKTKP
Trigger: AGGCTTTGTTTTCACATTTCATCCTATCAGAGGCTG...AGTTTCAGGGCATTTGGTGATCTTGTTGGGGTAACCATCATAAAAGGCTGGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR GCA 90 bp CTTTGCCAAAGTAGCCATATATCTTACTCTCACAGCTTCTCCAGGTTTTTGCTCAGAGCACTGACCATATaGACAGATGCAGATACCCAA +
Preference number: 4 (lower is better)
Translates to: LCQSSHISYSHSFSRFLLRALTI*TDADTQ
Trigger: TTGGGTATCTGCATCTGTGCATATGGTCAGTGCTCT...GAGCAAAAACCTGGAGAAGCTGTGAGAGTAAGATATATGGCTACTTTGGCAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR GCA 90 bp GACCATATCACCTGCTTACCCTTTTCTCACTGCTCTGGCTGCTCAGTCTCTTCAAGGTTAGTAAGTGCTTaGAAAAAGTGTTGCAAAAAC +
Preference number: 4 (lower is better)
Translates to: DHITCLPFSHCSGCSVSSRLVSA*KKCCKN
Trigger: GTTTTTGCAACACTTTTTGCAAGCACTTACTAACCT...TGAAGAGACTGAGCAGCCAGAGCAGTGAGAAAAGGGTAAGCAGGTGATATGGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR GCA 90 bp ACTACTGAAACTGACTACCAGCCTTTTATGATGGTTACCCCAACAAGATCACCAAACAAGATCACCAAATaGCCTGAAACTTCCGGCTTG +
Preference number: 4 (lower is better)
Translates to: TTETDYQPFMMVTPTRSPNKITK*PETSGL
Trigger: CAAGCCGGAAGTTTCAGGGCATTTGGTGATCTTGTT...TGGTGATCTTGTTGGGGTAACCATCATAAAAGGCTGGTAGTCAGTTTCAGTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CCA 90 bp ACTACTGAAACTGACTACCAGCCTTTTATGATGGTTACCCCAACAAGATCACCACTACCAACTCAGTTATaGACATGTCTGTGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: TTETDYQPFMMVTPTRSPLPTQL*TCLCRR
Trigger: TCTCCTGCACAGACATGTCCATAACTGAGTTGGTAG...TGGTGATCTTGTTGGGGTAACCATCATAAAAGGCTGGTAGTCAGTTTCAGTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CCA 90 bp CTTTGCCAAAGTAGCCATATATCTTACTCTCACAGCTTCTCCAGGTTTTTGCTCCTTTCTGCTTTCCTGTaGGCATGCATAATATGGTGG +
Preference number: 4 (lower is better)
Translates to: LCQSSHISYSHSFSRFLLLSAFL*ACIIWW
Trigger: CCACCATATTATGCATGCCCACAGGAAAGCAGAAAG...GAGCAAAAACCTGGAGAAGCTGTGAGAGTAAGATATATGGCTACTTTGGCAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CCA 90 bp GTAATCCACTATACATTATTTTCTCTGTTGAGGCAGATTTCTACATTGGTCTGTCATCTGCATCTGATGTaGCACGAGGCTGCTTCGTCC +
Preference number: 4 (lower is better)
Translates to: VIHYTLFSLLRQISTLVCHLHLM*HEAASS
Trigger: GGACGAAGCAGCCTCGTGCCACATCAGATGCAGATG...ACAGACCAATGTAGAAATCTGCCTCAACAGAGAAAATAATGTATAGTGGATTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CCA 90 bp CTTACCCTTTTCTCACTGCTCTGGCTGCTCAGTCTCTTCAATGTCCCTCAAACACTAAAGGATACATTGTaGCACCTAGAAGGGAAATAT +
Preference number: 4 (lower is better)
Translates to: LTLFSLLWLLSLFNVPQTLKDTL*HLEGKY
Trigger: ATATTTCCCTTCTAGGTGCCACAATGTATCCTTTAG...TGTTTGAGGGACATTGAAGAGACTGAGCAGCCAGAGCAGTGAGAAAAGGGTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CCA 90 bp CTTAGAAAGATGGGAAATCAGGAAGCTACCACCTATTTTGTTGGCCCCAGAGCTATCTCCCTTTGCCAATaGCAAAACTATGAACCAAGA +
Preference number: 4 (lower is better)
Translates to: LRKMGNQEATTYFVGPRAISLCQ*QNYEPR
Trigger: TCTTGGTTCATAGTTTTGCCATTGGCAAAGGGAGAT...AGCTCTGGGGCCAACAAAATAGGTGGTAGCTTCCTGATTTCCCATCTTTCTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CCA 90 bp AGGTATTTCTTGGCTTGTGGATGCAGAACTCCAATCTCTATCTCTACCTTCACACTTTTCTCACTGCTCTaGCTGCTCAGTCTCTTCAAT +
Preference number: 4 (lower is better)
Translates to: RYFLACGCRTPISISTFTLFSLL*LLSLFN
Trigger: ATTGAAGAGACTGAGCAGCCAGAGCAGTGAGAAAAG...TGTGAAGGTAGAGATAGAGATTGGAGTTCTGCATCCACAAGCCAAGAAATACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR TCA 90 bp TTCATCACAACTTACTTGTTGCATCAAGGGACCAAACTACATTCCAGAAGCAAACTGAATAGAAAATGGTaGCCACCACAAGATGGGAGG +
Preference number: 4 (lower is better)
Translates to: FITTYLLHQGTKLHSRSKLNRKW*PPQDGR
Trigger: CCTCCCATCTTGTGGTGGTCACCATTTTCTATTCAG...TTTGCTTCTGGAATGTAGTTTGGTCCCTTGATGCAACAAGTAAGTTGTGATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR TCA 90 bp CTACCAGCCTTTTATGATGGTTACCCCAACAAGATCACCAAATGCCCTGAAACTCACTATGGCATGGAATaGAAATCTCTGTCAATTCCT +
Preference number: 4 (lower is better)
Translates to: LPAFYDGYPNKITKCPETHYGME*KSLSIP
Trigger: AGGAATTGACAGAGATTTTCATTCCATGCCATAGTG...AGTTTCAGGGCATTTGGTGATCTTGTTGGGGTAACCATCATAAAAGGCTGGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR TCA 90 bp CTTTGCCAAAGTAGCCATATATCTTACTCTCACAGCTTCTCCAGGTTTTTGCTCGAATTAAATTCCCACTaGTGTTGGCCCACTATGTTG +
Preference number: 4 (lower is better)
Translates to: LCQSSHISYSHSFSRFLLELNSH*CWPTML
Trigger: CAACATAGTGGGCCAACATCAGTGGGAATTTAATTC...GAGCAAAAACCTGGAGAAGCTGTGAGAGTAAGATATATGGCTACTTTGGCAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR TCA 90 bp AGGTATTTCTTGGCTTGTGGATGCAGAACTCCAATCTCTATCTCTACCTTCACAGAATTAAATTCCCACTaGTGTTGGCCCACTATGTTG +
Preference number: 4 (lower is better)
Translates to: RYFLACGCRTPISISTFTELNSH*CWPTML
Trigger: CAACATAGTGGGCCAACATCAGTGGGAATTTAATTC...TGTGAAGGTAGAGATAGAGATTGGAGTTCTGCATCCACAAGCCAAGAAATACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR TCA 90 bp TTCATCACAACTTACTTGTTGCATCAAGGGACCAAACTACATTCCAGAAGCAAAGTGTCCTTACTTTGCTaGGCCTGTGCACTTAGGTAT +
Preference number: 4 (lower is better)
Translates to: FITTYLLHQGTKLHSRSKVSLLC*ACALRY
Trigger: ATACCTAAGTGCACAGGCTCAGCAAAGTAAGGACAC...TTTGCTTCTGGAATGTAGTTTGGTCCCTTGATGCAACAAGTAAGTTGTGATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR TCA 90 bp AGGTATTTCTTGGCTTGTGGATGCAGAACTCCAATCTCTATCTCTACCTTCACAACTACCAGCCTTTTATaGTGGTTACCCCAACAAGAT +
Preference number: 4 (lower is better)
Translates to: RYFLACGCRTPISISTFTTTSLL*WLPQQD
Trigger: ATCTTGTTGGGGTAACCATCATAAAAGGCTGGTAGT...TGTGAAGGTAGAGATAGAGATTGGAGTTCTGCATCCACAAGCCAAGAAATACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR TCA 90 bp CTACCAGCCTTTTATGATGGTTACCCCAACAAGATCACCAAATGCCCTGAAACTTTCTTCCTCACTTGGTaGTTCTGTGACCATCTTATT +
Preference number: 4 (lower is better)
Translates to: LPAFYDGYPNKITKCPETFFLTW*FCDHLI
Trigger: AATAAGATGGTCACAGAATCACCAAGTGAGGAAGAA...AGTTTCAGGGCATTTGGTGATCTTGTTGGGGTAACCATCATAAAAGGCTGGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR GCA 90 bp GATCCTCATAACCATTGCGTAAGAAACACCAAGCAACTATTATTACTCCTGTTTATATGGTGGCCAGAATaGATCCGTAGGACAGGACAG +
Preference number: 4 (lower is better)
Translates to: DPHNHCVRNTKQLLLLLFIWWPE*IRRTGQ
Trigger: CTGTCCTGTCCTACGGATGCATTCTGGCCACCATAT...AAACAGGAGTAATAATAGTTGCTTGGTGTTTCTTACGCAATGGTTATGAGGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR GCA 90 bp TTCATCACAACTTACTTGTTGCATCAAGGGACCAAACTACATTCCAGAAGCAAATTGACTAGTCAGATCTaGTGGCCTGGCAATATGCCA +
Preference number: 4 (lower is better)
Translates to: FITTYLLHQGTKLHSRSKLTSQI*WPGNMP
Trigger: TGGCATATTGCCAGGCCAGCAGATCTGACTAGTCAA...TTTGCTTCTGGAATGTAGTTTGGTCCCTTGATGCAACAAGTAAGTTGTGATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR GCA 90 bp AACCAAGAGCAAGCATATCTATGTACCTTCTATGGGTGTAAAGCACATTTGATCTTGACTAGTCAGATCTaGTGGCCTGGCAATATGCCA +
Preference number: 4 (lower is better)
Translates to: NQEQAYLCTFYGCKAHLILTSQI*WPGNMP
Trigger: TGGCATATTGCCAGGCCAGCAGATCTGACTAGTCAA...GATCAAATGTGCTTTACACCCATAGAAGGTACATAGATATGCTTGCTCTTGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR GCA 90 bp CTACCAGCCTTTTATGATGGTTACCCCAACAAGATCACCAAATGCCCTGAAACTTCACAACTTACTTGTTaGATCAAGGGACCAAACTAC +
Preference number: 4 (lower is better)
Translates to: LPAFYDGYPNKITKCPETSQLTC*IKGPNY
Trigger: GTAGTTTGGTCCCTTGATGCAACAAGTAAGTTGTGA...AGTTTCAGGGCATTTGGTGATCTTGTTGGGGTAACCATCATAAAAGGCTGGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR GCA 90 bp TTCATCACAACTTACTTGTTGCATCAAGGGACCAAACTACATTCCAGAAGCAAAAATCTAGTGGCAGCTTaGTTAGATCATGCACTGCCC +
Preference number: 4 (lower is better)
Translates to: FITTYLLHQGTKLHSRSKNLVAA*LDHALP
Trigger: GGGCAGTGCATGATCTAAGCAAGCTGCCACTAGATT...TTTGCTTCTGGAATGTAGTTTGGTCCCTTGATGCAACAAGTAAGTTGTGATGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR GCA 90 bp GTATTTCTTGGCTTGTGGATGCAGAACTCCAATCTCTATCTCTACCTTCACATCCTCCATATCTTCCCTTaGTGTTTCTCTACCTGGAAT +
Preference number: 4 (lower is better)
Translates to: VFLGLWMQNSNLYLYLHILHIFP*CFSTWN
Trigger: ATTCCAGGTAGAGAAACAGCAAGGGAAGATATGGAG...GATGTGAAGGTAGAGATAGAGATTGGAGTTCTGCATCCACAAGCCAAGAAATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CCA 90 bp TTCATCACAACTTACTTGTTGCATCAAGGGACCAAACTACATTCCAGAAGCAAAGCATGCATAATATGGTaGCCAGAATGCATCCGTAGG +
Preference number: 4 (lower is better)
Translates to: FITTYLLHQGTKLHSRSKACIIW*PECIRR
Trigger: CCTACGGATGCATTCTGGCCACCATATTATGCATGC...TTTGCTTCTGGAATGTAGTTTGGTCCCTTGATGCAACAAGTAAGTTGTGATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CCA 90 bp TTCATCACAACTTACTTGTTGCATCAAGGGACCAAACTACATTCCAGAAGCAAATGGGCATGCATAATATaGTGGCCAGAATGCATCCGT +
Preference number: 4 (lower is better)
Translates to: FITTYLLHQGTKLHSRSKWACII*WPECIR
Trigger: ACGGATGCATTCTGGCCACCATATTATGCATGCCCA...TTTGCTTCTGGAATGTAGTTTGGTCCCTTGATGCAACAAGTAAGTTGTGATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CCA 90 bp GATCCTCATAACCATTGCGTAAGAAACACCAAGCAACTATTATTACTCCTGTTTCCTAGAAAGAGTGACTaGGTACAGATTGCCCCACTG +
Preference number: 4 (lower is better)
Translates to: DPHNHCVRNTKQLLLLLFPRKSD*VQIAPL
Trigger: CAGTGGGGCAATCTGTACCCAGTCACTCTTTCTAGG...AAACAGGAGTAATAATAGTTGCTTGGTGTTTCTTACGCAATGGTTATGAGGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CCA 90 bp TTCATCACAACTTACTTGTTGCATCAAGGGACCAAACTACATTCCAGAAGCAAATTGGATTCAGGGAACTaGGACTTTGACCTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: FITTYLLHQGTKLHSRSKLDSGN*DFDLCS
Trigger: AGAGCAGAGGTCAAAGTCCCAGTTCCCTGAATCCAA...TTTGCTTCTGGAATGTAGTTTGGTCCCTTGATGCAACAAGTAAGTTGTGATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CCA 90 bp GATCCTCATAACCATTGCGTAAGAAACACCAAGCAACTATTATTACTCCTGTTTTCTTCCAGCTTCTGGTaGCCCAAGGTATTTCTTGGC +
Preference number: 4 (lower is better)
Translates to: DPHNHCVRNTKQLLLLLFSSSFW*PKVFLG
Trigger: GCCAAGAAATACCTTGGGCCACCAGAAGCTGGAAGA...AAACAGGAGTAATAATAGTTGCTTGGTGTTTCTTACGCAATGGTTATGAGGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CCA 90 bp ACTACTGAAACTGACTACCAGCCTTTTATGATGGTTACCCCAACAAGATCACCAATATCTTCCAGCTTCTaGTGGCCCAAGGTATTTCTT +
Preference number: 4 (lower is better)
Translates to: TTETDYQPFMMVTPTRSPISSSF*WPKVFL
Trigger: AAGAAATACCTTGGGCCACCAGAAGCTGGAAGATAT...TGGTGATCTTGTTGGGGTAACCATCATAAAAGGCTGGTAGTCAGTTTCAGTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR TCA 90 bp GTATTTCTTGGCTTGTGGATGCAGAACTCCAATCTCTATCTCTACCTTCACATCGTATCATACAGAGTGTaGAAGAGATGCTGTTGTTCA +
Preference number: 4 (lower is better)
Translates to: VFLGLWMQNSNLYLYLHIVSYRV*KRCCCS
Trigger: TGAACAACAGCATCTCTTTCACACTCTGTATGATAC...GATGTGAAGGTAGAGATAGAGATTGGAGTTCTGCATCCACAAGCCAAGAAATAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR TCA 90 bp CTACCAGCCTTTTATGATGGTTACCCCAACAAGATCACCAAATGCCCTGAAACTCATTATTTTCTCTGTTaGGGCAGATTTCTACATTGG +
Preference number: 4 (lower is better)
Translates to: LPAFYDGYPNKITKCPETHYFLC*GRFLHW
Trigger: CCAATGTAGAAATCTGCCTCAACAGAGAAAATAATG...AGTTTCAGGGCATTTGGTGATCTTGTTGGGGTAACCATCATAAAAGGCTGGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR GCA 90 bp TTCATCACAACTTACTTGTTGCATCAAGGGACCAAACTACATTCCAGAAGCAAAAACAAGATCACCAAATaGCCTGAAACTTCCGGCTTG +
Preference number: 4 (lower is better)
Translates to: FITTYLLHQGTKLHSRSKNKITK*PETSGL
Trigger: CAAGCCGGAAGTTTCAGGGCATTTGGTGATCTTGTT...TTTGCTTCTGGAATGTAGTTTGGTCCCTTGATGCAACAAGTAAGTTGTGATGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CCA 90 bp AACCAAGAGCAAGCATATCTATGTACCTTCTATGGGTGTAAAGCACATTTGATCCTACCAACTCAGTTATaGACATGTCTGTGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: NQEQAYLCTFYGCKAHLILPTQL*TCLCRR
Trigger: TCTCCTGCACAGACATGTCCATAACTGAGTTGGTAG...GATCAAATGTGCTTTACACCCATAGAAGGTACATAGATATGCTTGCTCTTGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CCA 90 bp TTCATCACAACTTACTTGTTGCATCAAGGGACCAAACTACATTCCAGAAGCAAATTCATGTTGAAGGCATaGATAACTCGAGGTCGAGCA +
Preference number: 4 (lower is better)
Translates to: FITTYLLHQGTKLHSRSKFMLKA*ITRGRA
Trigger: TGCTCGACCTCGAGTTATCCATGCCTTCAACATGAA...TTTGCTTCTGGAATGTAGTTTGGTCCCTTGATGCAACAAGTAAGTTGTGATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CCA 90 bp GTATTTCTTGGCTTGTGGATGCAGAACTCCAATCTCTATCTCTACCTTCACATCTCTGTCTTAGAAAGATaGGAAATCAGGAAGCTACCA +
Preference number: 4 (lower is better)
Translates to: VFLGLWMQNSNLYLYLHISVLER*EIRKLP
Trigger: TGGTAGCTTCCTGATTTCCCATCTTTCTAAGACAGA...GATGTGAAGGTAGAGATAGAGATTGGAGTTCTGCATCCACAAGCCAAGAAATAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CCA 90 bp GTAATCCACTATACATTATTTTCTCTGTTGAGGCAGATTTCTACATTGGTCTGTGGAAACTTACAATCATaGCAGGAGGCGAAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: VIHYTLFSLLRQISTLVCGNLQS*QEAKGK
Trigger: CTTCCCCTTCGCCTCCTGCCATGATTGTAAGTTTCC...ACAGACCAATGTAGAAATCTGCCTCAACAGAGAAAATAATGTATAGTGGATTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CCA 90 bp GTAATCCACTATACATTATTTTCTCTGTTGAGGCAGATTTCTACATTGGTCTGTACAGTTCCACATGGTTaGGGAGGCCTCAGGAAACTT +
Preference number: 4 (lower is better)
Translates to: VIHYTLFSLLRQISTLVCTVPHG*GGLRKL
Trigger: AAGTTTCCTGAGGCCTCCCCAACCATGTGGAACTGT...ACAGACCAATGTAGAAATCTGCCTCAACAGAGAAAATAATGTATAGTGGATTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR TCA 90 bp GTAATCCACTATACATTATTTTCTCTGTTGAGGCAGATTTCTACATTGGTCTGTCTGAATAGAAAATGGTaGCCACCACAAGATGGGAGG +
Preference number: 4 (lower is better)
Translates to: VIHYTLFSLLRQISTLVCLNRKW*PPQDGR
Trigger: CCTCCCATCTTGTGGTGGTCACCATTTTCTATTCAG...ACAGACCAATGTAGAAATCTGCCTCAACAGAGAAAATAATGTATAGTGGATTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR TCA 90 bp GATCCTCATAACCATTGCGTAAGAAACACCAAGCAACTATTATTACTCCTGTTTCCAATGGCAAAACTATaGACCAAGAGCAAGCATATC +
Preference number: 4 (lower is better)
Translates to: DPHNHCVRNTKQLLLLLFPMAKL*TKSKHI
Trigger: GATATGCTTGCTCTTGGTTCATAGTTTTGCCATTGG...AAACAGGAGTAATAATAGTTGCTTGGTGTTTCTTACGCAATGGTTATGAGGATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR TCA 90 bp AACCAAGAGCAAGCATATCTATGTACCTTCTATGGGTGTAAAGCACATTTGATCGGATTACAATCAAGATaGGATTTGGGTAGGGAAACA +
Preference number: 4 (lower is better)
Translates to: NQEQAYLCTFYGCKAHLIGLQSR*DLGRET
Trigger: TGTTTCCCTACCCAAATCTCATCTTGATTGTAATCC...GATCAAATGTGCTTTACACCCATAGAAGGTACATAGATATGCTTGCTCTTGGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR GCA 90 bp AACCAAGAGCAAGCATATCTATGTACCTTCTATGGGTGTAAAGCACATTTGATCTCACAACTTACTTGTTaGATCAAGGGACCAAACTAC +
Preference number: 4 (lower is better)
Translates to: NQEQAYLCTFYGCKAHLISQLTC*IKGPNY
Trigger: GTAGTTTGGTCCCTTGATGCAACAAGTAAGTTGTGA...GATCAAATGTGCTTTACACCCATAGAAGGTACATAGATATGCTTGCTCTTGGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR GCA 90 bp GATCCTCATAACCATTGCGTAAGAAACACCAAGCAACTATTATTACTCCTGTTTATCCATAGCACTTATTaGCACCCAAATTGGGATGTG +
Preference number: 4 (lower is better)
Translates to: DPHNHCVRNTKQLLLLLFIHSTY*HPNWDV
Trigger: CACATCCCAATTTGGGTGGCAATAAGTGCTATGGAT...AAACAGGAGTAATAATAGTTGCTTGGTGTTTCTTACGCAATGGTTATGAGGATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR GCA 90 bp GATCCTCATAACCATTGCGTAAGAAACACCAAGCAACTATTATTACTCCTGTTTCTCCATATCTTCCCTTaGTGTTTCTCTACCTGGAAT +
Preference number: 4 (lower is better)
Translates to: DPHNHCVRNTKQLLLLLFLHIFP*CFSTWN
Trigger: ATTCCAGGTAGAGAAACAGCAAGGGAAGATATGGAG...AAACAGGAGTAATAATAGTTGCTTGGTGTTTCTTACGCAATGGTTATGAGGATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CCA 90 bp TTCATCACAACTTACTTGTTGCATCAAGGGACCAAACTACATTCCAGAAGCAAATCTGTCTTAGAAAGATaGGAAATCAGGAAGCTACCA +
Preference number: 4 (lower is better)
Translates to: FITTYLLHQGTKLHSRSKSVLER*EIRKLP
Trigger: TGGTAGCTTCCTGATTTCCCATCTTTCTAAGACAGA...TTTGCTTCTGGAATGTAGTTTGGTCCCTTGATGCAACAAGTAAGTTGTGATGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CCA 90 bp AACCAAGAGCAAGCATATCTATGTACCTTCTATGGGTGTAAAGCACATTTGATCTTCCAAAAGTATAGATaGTTTGGCCAAGGTCACATG +
Preference number: 4 (lower is better)
Translates to: NQEQAYLCTFYGCKAHLIFQKYR*FGQGHM
Trigger: CATGTGACCTTGGCCAAACCATCTATACTTTTGGAA...GATCAAATGTGCTTTACACCCATAGAAGGTACATAGATATGCTTGCTCTTGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
3UTR CAA 72 bp GATTTAATACAGGTTAGTAAGTGCTTGCAAAAAGTGTaGCAAAAACTCAGGAAGCAGTCTCTGCCACCAAAA +
Preference number: 4 (lower is better)
Translates to: DLIQVSKCLQKV*QKLRKQSLPPK
Trigger: TTTTGGTGGCAGAGACTGCTTCCTGAGTTTTTGCAACACTTTTTGCAAGCACTTACTAACCTGTATTAAATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR TCA 90 bp GTAATCCACTATACATTATTTTCTCTGTTGAGGCAGATTTCTACATTGGTCTGTAGCACATTTGATCAATaGGGTTCTAGCGTGTGTGTA +
Preference number: 4 (lower is better)
Translates to: VIHYTLFSLLRQISTLVCSTFDQ*GSSVCV
Trigger: TACACACACGCTAGAACCTCATTGATCAAATGTGCT...ACAGACCAATGTAGAAATCTGCCTCAACAGAGAAAATAATGTATAGTGGATTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CCA 90 bp TTCATCACAACTTACTTGTTGCATCAAGGGACCAAACTACATTCCAGAAGCAAATATTGCCACCCAAATTaGGATGTGTATTTATTTCCC +
Preference number: 4 (lower is better)
Translates to: FITTYLLHQGTKLHSRSKYCHPN*DVYLFP
Trigger: GGGAAATAAATACACATCCCAATTTGGGTGGCAATA...TTTGCTTCTGGAATGTAGTTTGGTCCCTTGATGCAACAAGTAAGTTGTGATGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR TCA 90 bp GATCCTCATAACCATTGCGTAAGAAACACCAAGCAACTATTATTACTCCTGTTTAAAAGATTCAGGTATTaGATAGATGTGAGGAACCCA +
Preference number: 4 (lower is better)
Translates to: DPHNHCVRNTKQLLLLLFKRFRY*IDVRNP
Trigger: TGGGTTCCTCACATCTATTCAATACCTGAATCTTTT...AAACAGGAGTAATAATAGTTGCTTGGTGTTTCTTACGCAATGGTTATGAGGATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR TCA 90 bp GATCCTCATAACCATTGCGTAAGAAACACCAAGCAACTATTATTACTCCTGTTTCATTATTTTCTCTGTTaGGGCAGATTTCTACATTGG +
Preference number: 4 (lower is better)
Translates to: DPHNHCVRNTKQLLLLLFHYFLC*GRFLHW
Trigger: CCAATGTAGAAATCTGCCTCAACAGAGAAAATAATG...AAACAGGAGTAATAATAGTTGCTTGGTGTTTCTTACGCAATGGTTATGAGGATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR GCA 90 bp TTCATCACAACTTACTTGTTGCATCAAGGGACCAAACTACATTCCAGAAGCAAAAGGTTAGTAAGTGCTTaGAAAAAGTGTTGCAAAAAC +
Preference number: 4 (lower is better)
Translates to: FITTYLLHQGTKLHSRSKRLVSA*KKCCKN
Trigger: GTTTTTGCAACACTTTTTGCAAGCACTTACTAACCT...TTTGCTTCTGGAATGTAGTTTGGTCCCTTGATGCAACAAGTAAGTTGTGATGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR GCA 90 bp GTAATCCACTATACATTATTTTCTCTGTTGAGGCAGATTTCTACATTGGTCTGTGATCCTCATAACCATTaGGTAAGAAACACCAAGCAA +
Preference number: 4 (lower is better)
Translates to: VIHYTLFSLLRQISTLVCDPHNH*VRNTKQ
Trigger: TTGCTTGGTGTTTCTTACGCAATGGTTATGAGGATC...ACAGACCAATGTAGAAATCTGCCTCAACAGAGAAAATAATGTATAGTGGATTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CCA 90 bp GTAATCCACTATACATTATTTTCTCTGTTGAGGCAGATTTCTACATTGGTCTGTATCTCCCTTTGCCAATaGCAAAACTATGAACCAAGA +
Preference number: 4 (lower is better)
Translates to: VIHYTLFSLLRQISTLVCISLCQ*QNYEPR
Trigger: TCTTGGTTCATAGTTTTGCCATTGGCAAAGGGAGAT...ACAGACCAATGTAGAAATCTGCCTCAACAGAGAAAATAATGTATAGTGGATTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CCA 90 bp AACCAAGAGCAAGCATATCTATGTACCTTCTATGGGTGTAAAGCACATTTGATCTATAACTATAGTATGTaGAGTCAACTAGGTGTGGAA +
Preference number: 4 (lower is better)
Translates to: NQEQAYLCTFYGCKAHLIYNYSM*SQLGVE
Trigger: TTCCACACCTAGTTGACTCCACATACTATAGTTATA...GATCAAATGTGCTTTACACCCATAGAAGGTACATAGATATGCTTGCTCTTGGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CCA 90 bp TTCATCACAACTTACTTGTTGCATCAAGGGACCAAACTACATTCCAGAAGCAAATATAACTATAGTATGTaGAGTCAACTAGGTGTGGAA +
Preference number: 4 (lower is better)
Translates to: FITTYLLHQGTKLHSRSKYNYSM*SQLGVE
Trigger: TTCCACACCTAGTTGACTCCACATACTATAGTTATA...TTTGCTTCTGGAATGTAGTTTGGTCCCTTGATGCAACAAGTAAGTTGTGATGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS GCA 90 bp GCCCTAGGCACTAGGACCACATCTGCATCTGATGTGGCACGAGGCTaGTTCGTCCAGCACCCTGGGACTAGGGTGCCCATCACCTTCCTG +
Preference number: 5 (lower is better)
Translates to: ALGTRTTSASDVARG*FVQHPGTRVPITFL
Trigger: CAGGAAGGTGATGGGCACCCTAGTCCCAGGGTGCTGGACGAAGCAGCCTCGTGCCACATCAGATGCAGATGTGGTCCTAGTGCCTAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CAA 90 bp ACATGGTTGGGGAGGCCTCAGGAAACTTACAATCATGGCAGGAGGCGAAGGGGAGTGACTGGGTACAGATaGCCCCACTGCTTTCAAGCT +
Preference number: 5 (lower is better)
Translates to: TWLGRPQETYNHGRRRRGVTGYR*PHCFQA
Trigger: AGCTTGAAAGCAGTGGGGCAATCTGTACCCAGTCAC...TCCCCTTCGCCTCCTGCCATGATTGTAAGTTTCCTGAGGCCTCCCCAACCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CAA 90 bp GTGTATGGCCTTAGAGCACTGACCATATGCACAGATGCAGATACCCAAGCGCCTCCCACCAGAATGAACTaGGTGACTCGTGTCTGGTTC +
Preference number: 5 (lower is better)
Translates to: VYGLRALTICTDADTQAPPTRMN*VTRVWF
Trigger: GAACCAGACACGAGTCACCAAGTTCATTCTGGTGGG...AGGCGCTTGGGTATCTGCATCTGTGCATATGGTCAGTGCTCTAAGGCCATACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CAA 90 bp GTGTATGGCCTTAGAGCACTGACCATATGCACAGATGCAGATACCCAAGCGCCTGTGACTGGGTACAGATaGCCCCACTGCTTTCAAGCT +
Preference number: 5 (lower is better)
Translates to: VYGLRALTICTDADTQAPVTGYR*PHCFQA
Trigger: AGCTTGAAAGCAGTGGGGCAATCTGTACCCAGTCAC...AGGCGCTTGGGTATCTGCATCTGTGCATATGGTCAGTGCTCTAAGGCCATACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CAA 90 bp CAGAGCCAGACCATATCACCTGCTTACCCTTTTCTCACTGCTCTGGCTGCTCAGGGCCCAAGGTATTTCTaGGCTTGTGGATGCAGAACT +
Preference number: 5 (lower is better)
Translates to: QSQTISPAYPFLTALAAQGPRYF*ACGCRT
Trigger: AGTTCTGCATCCACAAGCCAAGAAATACCTTGGGCC...CTGAGCAGCCAGAGCAGTGAGAAAAGGGTAAGCAGGTGATATGGTCTGGCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CAA 90 bp ACATGGTTGGGGAGGCCTCAGGAAACTTACAATCATGGCAGGAGGCGAAGGGGACCACTAAAGGATACATaGTGGCACCTAGAAGGGAAA +
Preference number: 5 (lower is better)
Translates to: TWLGRPQETYNHGRRRRGPLKDT*WHLEGK
Trigger: TTTCCCTTCTAGGTGCCACAATGTATCCTTTAGTGG...TCCCCTTCGCCTCCTGCCATGATTGTAAGTTTCCTGAGGCCTCCCCAACCATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CAA 90 bp CTTAGAAAGATGGGAAATCAGGAAGCTACCACCTATTTTGTTGGCCCCAGAGCTCAGGGAACTGGGACTTaGACCTCTGCTCTCCCACTG +
Preference number: 5 (lower is better)
Translates to: LRKMGNQEATTYFVGPRAQGTGT*TSALPL
Trigger: CAGTGGGAGAGCAGAGGTCAAAGTCCCAGTTCCCTG...AGCTCTGGGGCCAACAAAATAGGTGGTAGCTTCCTGATTTCCCATCTTTCTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS GCA 90 bp AGCCACTGTCAGAATATAGGCCACAAGGAATATCAGAAACATGGCTaGCCGCATACTCAAGCTCCCAGGGAATCCCACCAGAATGAACTT +
Preference number: 5 (lower is better)
Translates to: SHCQNIGHKEYQKHG*PHTQAPRESHQNEL
Trigger: AAGTTCATTCTGGTGGGATTCCCTGGGAGCTTGAGTATGCGGGCAGCCATGTTTCTGATATTCCTTGTGGCCTATATTCTGACAGTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000408922.3
ENST00000641698.1
ENST00000642360.1
ENST00000647270.1
CDS-3UTR CAA 90 bp GACCATATCACCTGCTTACCCTTTTCTCACTGCTCTGGCTGCTCAGTCTCTTCACTACCACCTATTTTGTaGGCCCCAGAGCTATTAGTG +
Preference number: 5 (lower is better)
Translates to: DHITCLPFSHCSGCSVSSLPPIL*APELLV
Trigger: CACTAATAGCTCTGGGGCCAACAAAATAGGTGGTAG...TGAAGAGACTGAGCAGCCAGAGCAGTGAGAAAAGGGTAAGCAGGTGATATGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CAA 90 bp CTTTGCCAAAGTAGCCATATATCTTACTCTCACAGCTTCTCCAGGTTTTTGCTCCAGGGAACTGGGACTTaGACCTCTGCTCTCCCACTG +
Preference number: 5 (lower is better)
Translates to: LCQSSHISYSHSFSRFLLQGTGT*TSALPL
Trigger: CAGTGGGAGAGCAGAGGTCAAAGTCCCAGTTCCCTG...GAGCAAAAACCTGGAGAAGCTGTGAGAGTAAGATATATGGCTACTTTGGCAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CAA 90 bp CTTAGAAAGATGGGAAATCAGGAAGCTACCACCTATTTTGTTGGCCCCAGAGCTTACAGTTCCACATGGTaGGGGAGGCCTCAGGAAACT +
Preference number: 5 (lower is better)
Translates to: LRKMGNQEATTYFVGPRAYSSTW*GRPQET
Trigger: AGTTTCCTGAGGCCTCCCCAACCATGTGGAACTGTA...AGCTCTGGGGCCAACAAAATAGGTGGTAGCTTCCTGATTTCCCATCTTTCTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CAA 90 bp CAGAGCCAGACCATATCACCTGCTTACCCTTTTCTCACTGCTCTGGCTGCTCAGGTGAAAGAGATGCTGTaGTTCACAGACCAAAAACTA +
Preference number: 5 (lower is better)
Translates to: QSQTISPAYPFLTALAAQVKEML*FTDQKL
Trigger: TAGTTTTTGGTCTGTGAACAACAGCATCTCTTTCAC...CTGAGCAGCCAGAGCAGTGAGAAAAGGGTAAGCAGGTGATATGGTCTGGCTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CAA 90 bp CCTGTGCACTTAGGTATTCCTTCCACAAAGGGGAAGGAGCTCAATGTTCCATCTTTCTTCAGAGCTTCCTaGACCTCTCGGTTTCTTAGG +
Preference number: 5 (lower is better)
Translates to: PVHLGIPSTKGKELNVPSFFRAS*TSRFLR
Trigger: CCTAAGAAACCGAGAGGTCAAGGAAGCTCTGAAGAA...AGATGGAACATTGAGCTCCTTCCCCTTTGTGGAAGGAATACCTAAGTGCACAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CAA 90 bp CAGAGCCAGACCATATCACCTGCTTACCCTTTTCTCACTGCTCTGGCTGCTCAGTCTCATATAAGGAACTaGTCATTGGACATTGAGTCC +
Preference number: 5 (lower is better)
Translates to: QSQTISPAYPFLTALAAQSHIRN*SLDIES
Trigger: GGACTCAATGTCCAATGACAAGTTCCTTATATGAGA...CTGAGCAGCCAGAGCAGTGAGAAAAGGGTAAGCAGGTGATATGGTCTGGCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CAA 90 bp CTTAGAAAGATGGGAAATCAGGAAGCTACCACCTATTTTGTTGGCCCCAGAGCTTTCTTCAGAGCTTCCTaGACCTCTCGGTTTCTTAGG +
Preference number: 5 (lower is better)
Translates to: LRKMGNQEATTYFVGPRAFFRAS*TSRFLR
Trigger: CCTAAGAAACCGAGAGGTCAAGGAAGCTCTGAAGAA...AGCTCTGGGGCCAACAAAATAGGTGGTAGCTTCCTGATTTCCCATCTTTCTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CAA 90 bp CTTACCCTTTTCTCACTGCTCTGGCTGCTCAGTCTCTTCAATGTCCCTCAAACAAAGCTACCACCTATTTaGTTGGCCCCAGAGCTATTA +
Preference number: 5 (lower is better)
Translates to: LTLFSLLWLLSLFNVPQTKLPPI*LAPELL
Trigger: TAATAGCTCTGGGGCCAACAAAATAGGTGGTAGCTT...TGTTTGAGGGACATTGAAGAGACTGAGCAGCCAGAGCAGTGAGAAAAGGGTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CAA 90 bp GACCATATCACCTGCTTACCCTTTTCTCACTGCTCTGGCTGCTCAGTCTCTTCAAAATTCCCACTGATGTaGGCCCACTATGTTGAATAC +
Preference number: 5 (lower is better)
Translates to: DHITCLPFSHCSGCSVSSKFPLM*AHYVEY
Trigger: GTATTCAACATAGTGGGCCAACATCAGTGGGAATTT...TGAAGAGACTGAGCAGCCAGAGCAGTGAGAAAAGGGTAAGCAGGTGATATGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS TCA 90 bp ACATACAGGCACCCACTCAGACCTTTCTTTCTAATCAGCTGTAATTaGCTAGTCAGATCTGCTGGCCTGGCAATATGCCAGTTTCTTCAG +
Preference number: 5 (lower is better)
Translates to: TYRHPLRPFFLISCN*LVRSAGLAICQFLQ
Trigger: CTGAAGAAACTGGCATATTGCCAGGCCAGCAGATCTGACTAGTCAATTACAGCTGATTAGAAAGAAAGGTCTGAGTGGGTGCCTGTATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000408922.3
ENST00000641698.1
ENST00000642360.1
ENST00000647270.1
CDS-3UTR CAA 90 bp TTCATCACAACTTACTTGTTGCATCAAGGGACCAAACTACATTCCAGAAGCAAACATGGCTCATTATGGTaGGGTAGTGGAGTGGGCGAC +
Preference number: 5 (lower is better)
Translates to: FITTYLLHQGTKLHSRSKHGSLW*GSGVGD
Trigger: GTCGCCCACTCCACTACCCAACCATAATGAGCCATG...TTTGCTTCTGGAATGTAGTTTGGTCCCTTGATGCAACAAGTAAGTTGTGATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CAA 90 bp GACCATATCACCTGCTTACCCTTTTCTCACTGCTCTGGCTGCTCAGTCTCTTCATTCATCACAACTTACTaGTTGCATCAAGGGACCAAA +
Preference number: 5 (lower is better)
Translates to: DHITCLPFSHCSGCSVSSFITTY*LHQGTK
Trigger: TTTGGTCCCTTGATGCAACAAGTAAGTTGTGATGAA...TGAAGAGACTGAGCAGCCAGAGCAGTGAGAAAAGGGTAAGCAGGTGATATGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CAA 90 bp CTTACCCTTTTCTCACTGCTCTGGCTGCTCAGTCTCTTCAATGTCCCTCAAACAAACTTCCGGCTTGCTTaGTGTGTCACCTTAGAAATA +
Preference number: 5 (lower is better)
Translates to: LTLFSLLWLLSLFNVPQTNFRLA*CVTLEI
Trigger: TATTTCTAAGGTGACACACAAAGCAAGCCGGAAGTT...TGTTTGAGGGACATTGAAGAGACTGAGCAGCCAGAGCAGTGAGAAAAGGGTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CAA 90 bp GACCATATCACCTGCTTACCCTTTTCTCACTGCTCTGGCTGCTCAGTCTCTTCAGGGTTCCTTATGAGTTaGGATGGTGATAATCAAATC +
Preference number: 5 (lower is better)
Translates to: DHITCLPFSHCSGCSVSSGFLMS*DGDNQI
Trigger: GATTTGATTATCACCATCCAAACTCATAAGGAACCC...TGAAGAGACTGAGCAGCCAGAGCAGTGAGAAAAGGGTAAGCAGGTGATATGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CAA 90 bp GTGTATGGCCTTAGAGCACTGACCATATGCACAGATGCAGATACCCAAGCGCCTTTATTGCCACCCAAATaGGGATGTGTATTTATTTCC +
Preference number: 5 (lower is better)
Translates to: VYGLRALTICTDADTQAPLLPPK*GCVFIS
Trigger: GGAAATAAATACACATCCCAATTTGGGTGGCAATAA...AGGCGCTTGGGTATCTGCATCTGTGCATATGGTCAGTGCTCTAAGGCCATACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CAA 90 bp CTTTGCCAAAGTAGCCATATATCTTACTCTCACAGCTTCTCCAGGTTTTTGCTCTTCTCCAACTCCATATaGGAGACACAGGGCTTAGCT +
Preference number: 5 (lower is better)
Translates to: LCQSSHISYSHSFSRFLLFSNSI*ETQGLA
Trigger: AGCTAAGCCCTGTGTCTCCAATATGGAGTTGGAGAA...GAGCAAAAACCTGGAGAAGCTGTGAGAGTAAGATATATGGCTACTTTGGCAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CAA 90 bp GTATTTCTTGGCTTGTGGATGCAGAACTCCAATCTCTATCTCTACCTTCACATCTCAAGAATGAGACTGTaGAGGGAGTTGCTACCTCTG +
Preference number: 5 (lower is better)
Translates to: VFLGLWMQNSNLYLYLHISRMRL*RELLPL
Trigger: CAGAGGTAGCAACTCCCTCAACAGTCTCATTCTTGA...GATGTGAAGGTAGAGATAGAGATTGGAGTTCTGCATCCACAAGCCAAGAAATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CAA 90 bp CTTAGAAAGATGGGAAATCAGGAAGCTACCACCTATTTTGTTGGCCCCAGAGCTAAATTCCCACTGATGTaGGCCCACTATGTTGAATAC +
Preference number: 5 (lower is better)
Translates to: LRKMGNQEATTYFVGPRAKFPLM*AHYVEY
Trigger: GTATTCAACATAGTGGGCCAACATCAGTGGGAATTT...AGCTCTGGGGCCAACAAAATAGGTGGTAGCTTCCTGATTTCCCATCTTTCTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CAA 90 bp GTAATCCACTATACATTATTTTCTCTGTTGAGGCAGATTTCTACATTGGTCTGTCATGGCTCATTATGGTaGGGTAGTGGAGTGGGCGAC +
Preference number: 5 (lower is better)
Translates to: VIHYTLFSLLRQISTLVCHGSLW*GSGVGD
Trigger: GTCGCCCACTCCACTACCCAACCATAATGAGCCATG...ACAGACCAATGTAGAAATCTGCCTCAACAGAGAAAATAATGTATAGTGGATTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CAA 90 bp GTATTTCTTGGCTTGTGGATGCAGAACTCCAATCTCTATCTCTACCTTCACATCAAGCTACCACCTATTTaGTTGGCCCCAGAGCTATTA +
Preference number: 5 (lower is better)
Translates to: VFLGLWMQNSNLYLYLHIKLPPI*LAPELL
Trigger: TAATAGCTCTGGGGCCAACAAAATAGGTGGTAGCTT...GATGTGAAGGTAGAGATAGAGATTGGAGTTCTGCATCCACAAGCCAAGAAATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CAA 90 bp CCTGTGCACTTAGGTATTCCTTCCACAAAGGGGAAGGAGCTCAATGTTCCATCTCAGGTTAGTAAGTGCTaGCAAAAAGTGTTGCAAAAA +
Preference number: 5 (lower is better)
Translates to: PVHLGIPSTKGKELNVPSQVSKC*QKVLQK
Trigger: TTTTTGCAACACTTTTTGCAAGCACTTACTAACCTG...AGATGGAACATTGAGCTCCTTCCCCTTTGTGGAAGGAATACCTAAGTGCACAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CAA 90 bp GTATTTCTTGGCTTGTGGATGCAGAACTCCAATCTCTATCTCTACCTTCACATCCCACTAAAGGATACATaGTGGCACCTAGAAGGGAAA +
Preference number: 5 (lower is better)
Translates to: VFLGLWMQNSNLYLYLHIPLKDT*WHLEGK
Trigger: TTTCCCTTCTAGGTGCCACAATGTATCCTTTAGTGG...GATGTGAAGGTAGAGATAGAGATTGGAGTTCTGCATCCACAAGCCAAGAAATAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CAA 90 bp AGGTATTTCTTGGCTTGTGGATGCAGAACTCCAATCTCTATCTCTACCTTCACAGGGTGTAAAGCACATTaGATCAATGAGGTTCTAGCG +
Preference number: 5 (lower is better)
Translates to: RYFLACGCRTPISISTFTGCKAH*INEVLA
Trigger: CGCTAGAACCTCATTGATCAAATGTGCTTTACACCC...TGTGAAGGTAGAGATAGAGATTGGAGTTCTGCATCCACAAGCCAAGAAATACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CAA 90 bp CTTAGAAAGATGGGAAATCAGGAAGCTACCACCTATTTTGTTGGCCCCAGAGCTTTCATCACAACTTACTaGTTGCATCAAGGGACCAAA +
Preference number: 5 (lower is better)
Translates to: LRKMGNQEATTYFVGPRAFITTY*LHQGTK
Trigger: TTTGGTCCCTTGATGCAACAAGTAAGTTGTGATGAA...AGCTCTGGGGCCAACAAAATAGGTGGTAGCTTCCTGATTTCCCATCTTTCTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CAA 90 bp CTTAGAAAGATGGGAAATCAGGAAGCTACCACCTATTTTGTTGGCCCCAGAGCTGGGTTCCTTATGAGTTaGGATGGTGATAATCAAATC +
Preference number: 5 (lower is better)
Translates to: LRKMGNQEATTYFVGPRAGFLMS*DGDNQI
Trigger: GATTTGATTATCACCATCCAAACTCATAAGGAACCC...AGCTCTGGGGCCAACAAAATAGGTGGTAGCTTCCTGATTTCCCATCTTTCTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CAA 90 bp AACCAAGAGCAAGCATATCTATGTACCTTCTATGGGTGTAAAGCACATTTGATCGGCCCAAGGTATTTCTaGGCTTGTGGATGCAGAACT +
Preference number: 5 (lower is better)
Translates to: NQEQAYLCTFYGCKAHLIGPRYF*ACGCRT
Trigger: AGTTCTGCATCCACAAGCCAAGAAATACCTTGGGCC...GATCAAATGTGCTTTACACCCATAGAAGGTACATAGATATGCTTGCTCTTGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CAA 90 bp CTACCAGCCTTTTATGATGGTTACCCCAACAAGATCACCAAATGCCCTGAAACTAGCTTCTCCAGGTTTTaGCTCAAACATTTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: LPAFYDGYPNKITKCPETSFSRF*LKHFFL
Trigger: GAGGAAGAAATGTTTGAGCAAAAACCTGGAGAAGCT...AGTTTCAGGGCATTTGGTGATCTTGTTGGGGTAACCATCATAAAAGGCTGGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CAA 90 bp AGGTATTTCTTGGCTTGTGGATGCAGAACTCCAATCTCTATCTCTACCTTCACAACTCCATATCTTCCCTaGCTGTTTCTCTACCTGGAA +
Preference number: 5 (lower is better)
Translates to: RYFLACGCRTPISISTFTTPYLP*LFLYLE
Trigger: TTCCAGGTAGAGAAACAGCAAGGGAAGATATGGAGT...TGTGAAGGTAGAGATAGAGATTGGAGTTCTGCATCCACAAGCCAAGAAATACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CAA 90 bp CTTTGCCAAAGTAGCCATATATCTTACTCTCACAGCTTCTCCAGGTTTTTGCTCCACCAGGTTCCCCTTTaGATATGTGGGGATTACAAT +
Preference number: 5 (lower is better)
Translates to: LCQSSHISYSHSFSRFLLHQVPL*ICGDYN
Trigger: ATTGTAATCCCCACATATCAAAAGGGGAACCTGGTG...GAGCAAAAACCTGGAGAAGCTGTGAGAGTAAGATATATGGCTACTTTGGCAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CAA 90 bp GTATTTCTTGGCTTGTGGATGCAGAACTCCAATCTCTATCTCTACCTTCACATCCACCAGGTTCCCCTTTaGATATGTGGGGATTACAAT +
Preference number: 5 (lower is better)
Translates to: VFLGLWMQNSNLYLYLHIHQVPL*ICGDYN
Trigger: ATTGTAATCCCCACATATCAAAAGGGGAACCTGGTG...GATGTGAAGGTAGAGATAGAGATTGGAGTTCTGCATCCACAAGCCAAGAAATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CAA 90 bp TTCATCACAACTTACTTGTTGCATCAAGGGACCAAACTACATTCCAGAAGCAAATTCTCCAACTCCATATaGGAGACACAGGGCTTAGCT +
Preference number: 5 (lower is better)
Translates to: FITTYLLHQGTKLHSRSKFSNSI*ETQGLA
Trigger: AGCTAAGCCCTGTGTCTCCAATATGGAGTTGGAGAA...TTTGCTTCTGGAATGTAGTTTGGTCCCTTGATGCAACAAGTAAGTTGTGATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CAA 90 bp GTAATCCACTATACATTATTTTCTCTGTTGAGGCAGATTTCTACATTGGTCTGTCCCACCAGAATGAACTaGGTGACTCGTGTCTGGTTC +
Preference number: 5 (lower is better)
Translates to: VIHYTLFSLLRQISTLVCPTRMN*VTRVWF
Trigger: GAACCAGACACGAGTCACCAAGTTCATTCTGGTGGG...ACAGACCAATGTAGAAATCTGCCTCAACAGAGAAAATAATGTATAGTGGATTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CAA 90 bp TTCATCACAACTTACTTGTTGCATCAAGGGACCAAACTACATTCCAGAAGCAAAAAGAAGTACATAGGCTaGTGCAGTGGCCGATTTTGC +
Preference number: 5 (lower is better)
Translates to: FITTYLLHQGTKLHSRSKKKYIG*CSGRFC
Trigger: GCAAAATCGGCCACTGCACAAGCCTATGTACTTCTT...TTTGCTTCTGGAATGTAGTTTGGTCCCTTGATGCAACAAGTAAGTTGTGATGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CAA 90 bp AACCAAGAGCAAGCATATCTATGTACCTTCTATGGGTGTAAAGCACATTTGATCCTACCACCTATTTTGTaGGCCCCAGAGCTATTAGTG +
Preference number: 5 (lower is better)
Translates to: NQEQAYLCTFYGCKAHLILPPIL*APELLV
Trigger: CACTAATAGCTCTGGGGCCAACAAAATAGGTGGTAG...GATCAAATGTGCTTTACACCCATAGAAGGTACATAGATATGCTTGCTCTTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CAA 90 bp GTAATCCACTATACATTATTTTCTCTGTTGAGGCAGATTTCTACATTGGTCTGTTACAGTTCCACATGGTaGGGGAGGCCTCAGGAAACT +
Preference number: 5 (lower is better)
Translates to: VIHYTLFSLLRQISTLVCYSSTW*GRPQET
Trigger: AGTTTCCTGAGGCCTCCCCAACCATGTGGAACTGTA...ACAGACCAATGTAGAAATCTGCCTCAACAGAGAAAATAATGTATAGTGGATTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CAA 90 bp CTTTGCCAAAGTAGCCATATATCTTACTCTCACAGCTTCTCCAGGTTTTTGCTCGTGAAAGAGATGCTGTaGTTCACAGACCAAAAACTA +
Preference number: 5 (lower is better)
Translates to: LCQSSHISYSHSFSRFLLVKEML*FTDQKL
Trigger: TAGTTTTTGGTCTGTGAACAACAGCATCTCTTTCAC...GAGCAAAAACCTGGAGAAGCTGTGAGAGTAAGATATATGGCTACTTTGGCAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CAA 90 bp CTACCAGCCTTTTATGATGGTTACCCCAACAAGATCACCAAATGCCCTGAAACTCAGGTTAGTAAGTGCTaGCAAAAAGTGTTGCAAAAA +
Preference number: 5 (lower is better)
Translates to: LPAFYDGYPNKITKCPETQVSKC*QKVLQK
Trigger: TTTTTGCAACACTTTTTGCAAGCACTTACTAACCTG...AGTTTCAGGGCATTTGGTGATCTTGTTGGGGTAACCATCATAAAAGGCTGGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CAA 90 bp AACCAAGAGCAAGCATATCTATGTACCTTCTATGGGTGTAAAGCACATTTGATCGGGTGTAAAGCACATTaGATCAATGAGGTTCTAGCG +
Preference number: 5 (lower is better)
Translates to: NQEQAYLCTFYGCKAHLIGCKAH*INEVLA
Trigger: CGCTAGAACCTCATTGATCAAATGTGCTTTACACCC...GATCAAATGTGCTTTACACCCATAGAAGGTACATAGATATGCTTGCTCTTGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CAA 90 bp CTTTGCCAAAGTAGCCATATATCTTACTCTCACAGCTTCTCCAGGTTTTTGCTCTCTCATATAAGGAACTaGTCATTGGACATTGAGTCC +
Preference number: 5 (lower is better)
Translates to: LCQSSHISYSHSFSRFLLSHIRN*SLDIES
Trigger: GGACTCAATGTCCAATGACAAGTTCCTTATATGAGA...GAGCAAAAACCTGGAGAAGCTGTGAGAGTAAGATATATGGCTACTTTGGCAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CAA 90 bp AACCAAGAGCAAGCATATCTATGTACCTTCTATGGGTGTAAAGCACATTTGATCACTCCATATCTTCCCTaGCTGTTTCTCTACCTGGAA +
Preference number: 5 (lower is better)
Translates to: NQEQAYLCTFYGCKAHLITPYLP*LFLYLE
Trigger: TTCCAGGTAGAGAAACAGCAAGGGAAGATATGGAGT...GATCAAATGTGCTTTACACCCATAGAAGGTACATAGATATGCTTGCTCTTGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CAA 90 bp AACCAAGAGCAAGCATATCTATGTACCTTCTATGGGTGTAAAGCACATTTGATCAAACTAAACAGTAACTaGGGCACAGTCACAGAGATG +
Preference number: 5 (lower is better)
Translates to: NQEQAYLCTFYGCKAHLIKLNSN*GTVTEM
Trigger: CATCTCTGTGACTGTGCCCAAGTTACTGTTTAGTTT...GATCAAATGTGCTTTACACCCATAGAAGGTACATAGATATGCTTGCTCTTGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CAA 90 bp TTCATCACAACTTACTTGTTGCATCAAGGGACCAAACTACATTCCAGAAGCAAAAAACTAAACAGTAACTaGGGCACAGTCACAGAGATG +
Preference number: 5 (lower is better)
Translates to: FITTYLLHQGTKLHSRSKKLNSN*GTVTEM
Trigger: CATCTCTGTGACTGTGCCCAAGTTACTGTTTAGTTT...TTTGCTTCTGGAATGTAGTTTGGTCCCTTGATGCAACAAGTAAGTTGTGATGAA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CAA 90 bp AACCAAGAGCAAGCATATCTATGTACCTTCTATGGGTGTAAAGCACATTTGATCAGGCAGATTTCTACATaGGTCTGTGTCCTTACTTTG +
Preference number: 5 (lower is better)
Translates to: NQEQAYLCTFYGCKAHLIRQIST*VCVLTL
Trigger: CAAAGTAAGGACACAGACCAATGTAGAAATCTGCCT...GATCAAATGTGCTTTACACCCATAGAAGGTACATAGATATGCTTGCTCTTGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CAA 90 bp AACCAAGAGCAAGCATATCTATGTACCTTCTATGGGTGTAAAGCACATTTGATCAACTTCCGGCTTGCTTaGTGTGTCACCTTAGAAATA +
Preference number: 5 (lower is better)
Translates to: NQEQAYLCTFYGCKAHLINFRLA*CVTLEI
Trigger: TATTTCTAAGGTGACACACAAAGCAAGCCGGAAGTT...GATCAAATGTGCTTTACACCCATAGAAGGTACATAGATATGCTTGCTCTTGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CAA 90 bp AACCAAGAGCAAGCATATCTATGTACCTTCTATGGGTGTAAAGCACATTTGATCAGCTTCTCCAGGTTTTaGCTCAAACATTTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: NQEQAYLCTFYGCKAHLISFSRF*LKHFFL
Trigger: GAGGAAGAAATGTTTGAGCAAAAACCTGGAGAAGCT...GATCAAATGTGCTTTACACCCATAGAAGGTACATAGATATGCTTGCTCTTGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CAA 90 bp GATCCTCATAACCATTGCGTAAGAAACACCAAGCAACTATTATTACTCCTGTTTAAGGTATTTCTTGGCTaGTGGATGCAGAACTCCAAT +
Preference number: 5 (lower is better)
Translates to: DPHNHCVRNTKQLLLLLFKVFLG*WMQNSN
Trigger: ATTGGAGTTCTGCATCCACAAGCCAAGAAATACCTT...AAACAGGAGTAATAATAGTTGCTTGGTGTTTCTTACGCAATGGTTATGAGGATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CAA 90 bp GTAATCCACTATACATTATTTTCTCTGTTGAGGCAGATTTCTACATTGGTCTGTAAGGTATTTCTTGGCTaGTGGATGCAGAACTCCAAT +
Preference number: 5 (lower is better)
Translates to: VIHYTLFSLLRQISTLVCKVFLG*WMQNSN
Trigger: ATTGGAGTTCTGCATCCACAAGCCAAGAAATACCTT...ACAGACCAATGTAGAAATCTGCCTCAACAGAGAAAATAATGTATAGTGGATTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS-3UTR CAA 90 bp TTCATCACAACTTACTTGTTGCATCAAGGGACCAAACTACATTCCAGAAGCAAATTATTGCCACCCAAATaGGGATGTGTATTTATTTCC +
Preference number: 5 (lower is better)
Translates to: FITTYLLHQGTKLHSRSKLLPPK*GCVFIS
Trigger: GGAAATAAATACACATCCCAATTTGGGTGGCAATAA...TTTGCTTCTGGAATGTAGTTTGGTCCCTTGATGCAACAAGTAAGTTGTGATGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS GCA 72 bp ACTAGGACCACATCTGCATCTGATGTGGCACGAGGCTaGTTCGTCCAGCACCCTGGGACTAGGGTGCCCATC +
Preference number: 6 (lower is better)
Translates to: TRTTSASDVARG*FVQHPGTRVPI
Trigger: GATGGGCACCCTAGTCCCAGGGTGCTGGACGAAGCAGCCTCGTGCCACATCAGATGCAGATGTGGTCCTAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS CAA 90 bp ACCAGAATGAACTTGGTGACTCGTGTCTGGTTCTCCAACTCCATATaGGAGACACAGGGCTTAGCTCTCCTTGGCACAGCAGCCTCTGAT +
Preference number: 6 (lower is better)
Translates to: TRMNLVTRVWFSNSI*ETQGLALLGTAASD
Trigger: ATCAGAGGCTGCTGTGCCAAGGAGAGCTAAGCCCTGTGTCTCCAATATGGAGTTGGAGAACCAGACACGAGTCACCAAGTTCATTCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS GCA 72 bp CAGAATATAGGCCACAAGGAATATCAGAAACATGGCTaGCCGCATACTCAAGCTCCCAGGGAATCCCACCAG +
Preference number: 6 (lower is better)
Translates to: QNIGHKEYQKHG*PHTQAPRESHQ
Trigger: CTGGTGGGATTCCCTGGGAGCTTGAGTATGCGGGCAGCCATGTTTCTGATATTCCTTGTGGCCTATATTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000408922.3
ENST00000641698.1
ENST00000642360.1
ENST00000647270.1
CDS CAA 90 bp GTGAAAGAGATGCTGTTGTTCACAGACCAAAAACTAAACAGTAACTaGGGCACAGTCACAGAGATGTACCAGGTCTCCAAGAAGGACAGG +
Preference number: 6 (lower is better)
Translates to: VKEMLLFTDQKLNSN*GTVTEMYQVSKKDR
Trigger: CCTGTCCTTCTTGGAGACCTGGTACATCTCTGTGACTGTGCCCAAGTTACTGTTTAGTTTTTGGTCTGTGAACAACAGCATCTCTTTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000408922.3
ENST00000641698.1
ENST00000642360.1
ENST00000647270.1
CDS CAA 72 bp CACTTTCTAAACCTAGAAAGAGTGACTGGGTACAGATaGCCCCACTGCTTTCAAGCTGAAAGCCAGGATAAG +
Preference number: 6 (lower is better)
Translates to: HFLNLERVTGYR*PHCFQAESQDK
Trigger: CTTATCCTGGCTTTCAGCTTGAAAGCAGTGGGGCAATCTGTACCCAGTCACTCTTTCTAGGTTTAGAAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641698.1
ENST00000647270.1
CDS CAA 72 bp ATGCTGTTGTTCACAGACCAAAAACTAAACAGTAACTaGGGCACAGTCACAGAGATGTACCAGGTCTCCAAG +
Preference number: 6 (lower is better)
Translates to: MLLFTDQKLNSN*GTVTEMYQVSK
Trigger: CTTGGAGACCTGGTACATCTCTGTGACTGTGCCCAAGTTACTGTTTAGTTTTTGGTCTGTGAACAACAGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000408922.3
ENST00000641698.1
ENST00000642360.1
ENST00000647270.1
CDS CAA 90 bp ATGAAGAAGTACAGTTGTATCATACAGAGTGTGAAAGAGATGCTGTaGTTCACAGACCAAAAACTAAACAGTAACTTGGGCACAGTCACA +
Preference number: 6 (lower is better)
Translates to: MKKYSCIIQSVKEML*FTDQKLNSNLGTVT
Trigger: TGTGACTGTGCCCAAGTTACTGTTTAGTTTTTGGTCTGTGAACAACAGCATCTCTTTCACACTCTGTATGATACAACTGTACTTCTTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000408922.3
ENST00000641698.1
ENST00000642360.1
ENST00000647270.1
CDS CAA 72 bp ACATTCTGTGCACATGAGAGCAATGAAGAAGTACAGTaGTATCATACAGAGTGTGAAAGAGATGCTGTTGTT +
Preference number: 6 (lower is better)
Translates to: TFCAHESNEEVQ*YHTECERDAVV
Trigger: AACAACAGCATCTCTTTCACACTCTGTATGATACAACTGTACTTCTTCATTGCTCTCATGTGCACAGAATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000408922.3
ENST00000641698.1
ENST00000642360.1
ENST00000647270.1