Pregenerated sensors for OR5V1 (Homo sapiens)
Ensembl gene IDs: ENSG00000112461, ENSG00000227137, ENSG00000243729Ensembl transcript IDs: ENST00000230223.5, ENST00000377154.1, ENST00000400698.6, ENST00000418692.1, ENST00000421859.5, ENST00000441440.5, ENST00000444009.5, ENST00000446761.1, ENST00000451227.1, ENST00000453123.1, ENST00000458123.1, ENST00000458372.1, ENST00000548546.1, ENST00000549299.1, ENST00000550240.1, ENST00000641768.1
Found 53 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTAAACAGAATAGGAATGGAGACAAGGCACTCCACTAGAACACTATaGCAACATTACACAAAAGAGGGGCTGGGAAGTCAAGACTTAATC | + |
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Preference number: 1 (lower is better) Translates to: LNRIGMETRHSTRTL*QHYTKEGLGSQDLI Trigger: GATTAAGTCTTGACTTCCCAGCCCCTCTTTTGTGTAATGTTGTCATAGTGTTCTAGTGGAGTGCCTTGTCTCCATTCCTATTCTGTTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641768.1 |
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| 3UTR-3UTR CCA 90 bp | AGTCAAGACTTAATCAAGGGAGGCATCAGTAGGTATGGGAAGAAAAAGAAGACGAAGATAAATTGGCCTTaGCCCATGCAGCAGGTGATA | + |
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Preference number: 2 (lower is better) Translates to: SQDLIKGGISRYGKKKKTKINWP*PMQQVI Trigger: TATCACCTGCTGCATGGGCCAAGGCCAATTTATCTT...CGTCTTCTTTTTCTTCCCATACCTACTGATGCCTCCCTTGATTAAGTCTTGACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000641768.1 |
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| 3UTR-3UTR CCA 90 bp | GAAAAAGAAGACGGTCCTGAGAGAATAGTGAAGAAAGACACTAGACAACTTGTAAATGTGAAGATAAATTaGCCTTGGCCCATGCAGCAG | + |
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Preference number: 2 (lower is better) Translates to: EKEDGPERIVKKDTRQLVNVKIN*PWPMQQ Trigger: CTGCTGCATGGGCCAAGGCCAATTTATCTTCACATT...TACAAGTTGTCTAGTGTCTTTCTTCACTATTCTCTCAGGACCGTCTTCTTTTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000641768.1 |
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| 3UTR TCA 72 bp | ATAGGAATGGAGACAAGGCACTCCACTAGAACACTATaGCAACATTACACAAAAGAGGGGCTGGGAAGTCAA | + |
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Preference number: 3 (lower is better) Translates to: IGMETRHSTRTL*QHYTKEGLGSQ Trigger: TTGACTTCCCAGCCCCTCTTTTGTGTAATGTTGTCATAGTGTTCTAGTGGAGTGCCTTGTCTCCATTCCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641768.1 |
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| 3UTR-3UTR CAA 90 bp | GCCTTGGCCCATGCAGCAGGTGATAAAATTAAAATTAGCTACCAACAGATCTGGAGAGGGAAACAGTCTTaGAATGCAAAATTCAGGAAT | + |
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Preference number: 3 (lower is better) Translates to: ALAHAAGDKIKISYQQIWRGKQS*NAKFRN Trigger: ATTCCTGAATTTTGCATTCAAAGACTGTTTCCCTCT...CCAGATCTGTTGGTAGCTAATTTTAATTTTATCACCTGCTGCATGGGCCAAGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000641768.1 |
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| 3UTR CCA 72 bp | GACTGTCTTCATTCCAATGTGAAGATAAATTGGCCTTaGCCCATGCAGCAGGTGATAAAATTAAAATTAGCT | + |
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Preference number: 3 (lower is better) Translates to: DCLHSNVKINWP*PMQQVIKLKLA Trigger: AGCTAATTTTAATTTTATCACCTGCTGCATGGGCCAAGGCCAATTTATCTTCACATTGGAATGAAGACAGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641768.1 |
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| 3UTR CCA 72 bp | AATTATGACTGTCTTCATTCCAATGTGAAGATAAATTaGCCTTGGCCCATGCAGCAGGTGATAAAATTAAAA | + |
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Preference number: 3 (lower is better) Translates to: NYDCLHSNVKIN*PWPMQQVIKLK Trigger: TTTTAATTTTATCACCTGCTGCATGGGCCAAGGCCAATTTATCTTCACATTGGAATGAAGACAGTCATAATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641768.1 |
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| CDS-3UTR CCA 90 bp | ATGACAACATTACACAAAAGAGGGGCTGGGAAGTCAAGACTTAATCAAGGGAGGCTTCCCTCTGAGGACTaGATCCTCAAGATGGTGGAG | + |
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Preference number: 4 (lower is better) Translates to: MTTLHKRGAGKSRLNQGRLPSED*ILKMVE Trigger: CTCCACCATCTTGAGGATCCAGTCCTCAGAGGGAAG...CCTCCCTTGATTAAGTCTTGACTTCCCAGCCCCTCTTTTGTGTAATGTTGTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641768.1 |
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| CDS-3UTR TCA 90 bp | GCCTTGGCCCATGCAGCAGGTGATAAAATTAAAATTAGCTACCAACAGATCTGGCACTGTATGCACCACTaGGTTAAGGAAACCAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: ALAHAAGDKIKISYQQIWHCMHH*VKETSS Trigger: GCTGCTGGTTTCCTTAACTCAGTGGTGCATACAGTG...CCAGATCTGTTGGTAGCTAATTTTAATTTTATCACCTGCTGCATGGGCCAAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641768.1 |
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| CDS-3UTR CCA 90 bp | ATGACAACATTACACAAAAGAGGGGCTGGGAAGTCAAGACTTAATCAAGGGAGGATCCAAAGAGGAAATTaGTGGCTGCCACTTGCTCCC | + |
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Preference number: 4 (lower is better) Translates to: MTTLHKRGAGKSRLNQGRIQRGN*WLPLAP Trigger: GGGAGCAAGTGGCAGCCACCAATTTCCTCTTTGGAT...CCTCCCTTGATTAAGTCTTGACTTCCCAGCCCCTCTTTTGTGTAATGTTGTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641768.1 |
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| CDS-3UTR TCA 90 bp | ATGACAACATTACACAAAAGAGGGGCTGGGAAGTCAAGACTTAATCAAGGGAGGGCAGTGCCAACTCATTaGCAGAAGTGTTTCCACAAG | + |
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Preference number: 4 (lower is better) Translates to: MTTLHKRGAGKSRLNQGRAVPTH*QKCFHK Trigger: CTTGTGGAAACACTTCTGTCAATGAGTTGGCACTGC...CCTCCCTTGATTAAGTCTTGACTTCCCAGCCCCTCTTTTGTGTAATGTTGTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641768.1 |
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| CDS-3UTR TCA 90 bp | GGAAGTCAAGACTTAATCAAGGGAGGCATCAGTAGGTATGGGAAGAAAAAGAAGAAGGAGTCCAACCAATaGAGACCCCAGTGGATAGCA | + |
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Preference number: 4 (lower is better) Translates to: GSQDLIKGGISRYGKKKKKESNQ*RPQWIA Trigger: TGCTATCCACTGGGGTCTTCATTGGTTGGACTCCTT...CTTCTTTTTCTTCCCATACCTACTGATGCCTCCCTTGATTAAGTCTTGACTTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000641768.1 |
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| CDS-3UTR CCA 90 bp | ATGACAACATTACACAAAAGAGGGGCTGGGAAGTCAAGACTTAATCAAGGGAGGAGGTGTATGCAGGTGTaGATCAGTCACAGTCGTCAA | + |
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Preference number: 4 (lower is better) Translates to: MTTLHKRGAGKSRLNQGRRCMQV*ISHSRQ Trigger: TTGACGACTGTGACTGATCCACACCTGCATACACCT...CCTCCCTTGATTAAGTCTTGACTTCCCAGCCCCTCTTTTGTGTAATGTTGTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641768.1 |
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| CDS-3UTR TCA 90 bp | AGTCAAGACTTAATCAAGGGAGGCATCAGTAGGTATGGGAAGAAAAAGAAGACGTGCATGGGACTGGAGTaGGTAAGGAAAATGCCCTTT | + |
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Preference number: 4 (lower is better) Translates to: SQDLIKGGISRYGKKKKTCMGLE*VRKMPF Trigger: AAAGGGCATTTTCCTTACTCACTCCAGTCCCATGCA...CGTCTTCTTTTTCTTCCCATACCTACTGATGCCTCCCTTGATTAAGTCTTGACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000641768.1 |
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| CDS-3UTR TCA 90 bp | AGAATAAGTACACTTAGACTGGAGTGTATCAACTCTTCAATATCTGTCCCAACAACTCTACTCAGTCCCTaGAGGCCAGTGCATGGGACT | + |
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Preference number: 4 (lower is better) Translates to: RISTLRLECINSSISVPTTLLSP*RPVHGT Trigger: AGTCCCATGCACTGGCCTTCAGGGACTGAGTAGAGT...TGTTGGGACAGATATTGAAGAGTTGATACACTCCAGTCTAAGTGTACTTATTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641768.1 |
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| CDS-3UTR TCA 90 bp | GGAAGTCAAGACTTAATCAAGGGAGGCATCAGTAGGTATGGGAAGAAAAAGAAGTTACCATTCAGACTCTaGGAGACTGATATGGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: GSQDLIKGGISRYGKKKKLPFRL*ETDMGL Trigger: CAGCCCCATATCAGTCTCTCAGAGTCTGAATGGTAA...CTTCTTTTTCTTCCCATACCTACTGATGCCTCCCTTGATTAAGTCTTGACTTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000641768.1 |
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| CDS-3UTR CCA 90 bp | GGAAGTCAAGACTTAATCAAGGGAGGCATCAGTAGGTATGGGAAGAAAAAGAAGTTCCATGATGTCGCCTaGTTTCCTTTCAGGAATTGG | + |
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Preference number: 4 (lower is better) Translates to: GSQDLIKGGISRYGKKKKFHDVA*FPFRNW Trigger: CCAATTCCTGAAAGGAAACCAGGCGACATCATGGAA...CTTCTTTTTCTTCCCATACCTACTGATGCCTCCCTTGATTAAGTCTTGACTTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000641768.1 |
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| CDS-3UTR GCA 90 bp | AGAATAAGTACACTTAGACTGGAGTGTATCAACTCTTCAATATCTGTCCCAACATTCTTTGAGAGGAGGTaGACCATCATCTGGGGGACA | + |
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Preference number: 4 (lower is better) Translates to: RISTLRLECINSSISVPTFFERR*TIIWGT Trigger: TGTCCCCCAGATGATGGTGCACCTCCTCTCAAAGAA...TGTTGGGACAGATATTGAAGAGTTGATACACTCCAGTCTAAGTGTACTTATTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000641768.1 |
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| CDS-3UTR GCA 90 bp | GAAAAAGAAGACGGTCCTGAGAGAATAGTGAAGAAAGACACTAGACAACTTGTAGAGGAAATTGGTGGCTaGCACTTGCTCCCTATAGTT | + |
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Preference number: 4 (lower is better) Translates to: EKEDGPERIVKKDTRQLVEEIGG*HLLPIV Trigger: AACTATAGGGAGCAAGTGGCAGCCACCAATTTCCTC...TACAAGTTGTCTAGTGTCTTTCTTCACTATTCTCTCAGGACCGTCTTCTTTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000641768.1 |
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| CDS-3UTR TCA 90 bp | CAATGTGAAGATAAATTGGCCTTGGCCCATGCAGCAGGTGATAAAATTAAAATTTTTTCGTCTTCCCTCTaGGGACTGGATCCTCAAGAT | + |
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Preference number: 4 (lower is better) Translates to: QCEDKLALAHAAGDKIKIFSSSL*GLDPQD Trigger: ATCTTGAGGATCCAGTCCTCAGAGGGAAGACGAAAA...AATTTTAATTTTATCACCTGCTGCATGGGCCAAGGCCAATTTATCTTCACATTG 41% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000641768.1 |
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| CDS-3UTR TCA 90 bp | CAATGTGAAGATAAATTGGCCTTGGCCCATGCAGCAGGTGATAAAATTAAAATTGATGGGTTTTCTAGGTaGGTGCCAAGACTCTACTCA | + |
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Preference number: 4 (lower is better) Translates to: QCEDKLALAHAAGDKIKIDGFSR*VPRLYS Trigger: TGAGTAGAGTCTTGGCACTCACCTAGAAAACCCATC...AATTTTAATTTTATCACCTGCTGCATGGGCCAAGGCCAATTTATCTTCACATTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000641768.1 |
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| CDS-3UTR TCA 90 bp | AGTCAAGACTTAATCAAGGGAGGCATCAGTAGGTATGGGAAGAAAAAGAAGACGTGTGATTGGAGATATTaGGCAGAGATTACCATTCAG | + |
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Preference number: 4 (lower is better) Translates to: SQDLIKGGISRYGKKKKTCDWRY*AEITIQ Trigger: CTGAATGGTAATCTCTGCTCAATATCTCCAATCACA...CGTCTTCTTTTTCTTCCCATACCTACTGATGCCTCCCTTGATTAAGTCTTGACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000641768.1 |
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| CDS-3UTR GCA 90 bp | GGAAGTCAAGACTTAATCAAGGGAGGCATCAGTAGGTATGGGAAGAAAAAGAAGAGGCTGCTAATTGATTaGATAGAACCTTGCTCAGAA | + |
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Preference number: 4 (lower is better) Translates to: GSQDLIKGGISRYGKKKKRLLID*IEPCSE Trigger: TTCTGAGCAAGGTTCTATGCAATCAATTAGCAGCCT...CTTCTTTTTCTTCCCATACCTACTGATGCCTCCCTTGATTAAGTCTTGACTTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000641768.1 |
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| CDS-3UTR GCA 90 bp | CAATGTGAAGATAAATTGGCCTTGGCCCATGCAGCAGGTGATAAAATTAAAATTGGTTTTCTAGGTGAGTaGCAAGACTCTACTCAGTCC | + |
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Preference number: 4 (lower is better) Translates to: QCEDKLALAHAAGDKIKIGFLGE*QDSTQS Trigger: GGACTGAGTAGAGTCTTGGCACTCACCTAGAAAACC...AATTTTAATTTTATCACCTGCTGCATGGGCCAAGGCCAATTTATCTTCACATTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000641768.1 |
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| CDS-3UTR TCA 90 bp | AGTCAAGACTTAATCAAGGGAGGCATCAGTAGGTATGGGAAGAAAAAGAAGACGTCCACTAGAACACTATaGCAACATTACACAAAAGAG | + |
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Preference number: 4 (lower is better) Translates to: SQDLIKGGISRYGKKKKTSTRTL*QHYTKE Trigger: CTCTTTTGTGTAATGTTGTCATAGTGTTCTAGTGGA...CGTCTTCTTTTTCTTCCCATACCTACTGATGCCTCCCTTGATTAAGTCTTGACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000641768.1 |
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| CDS-3UTR GCA 90 bp | GGAAGTCAAGACTTAATCAAGGGAGGCATCAGTAGGTATGGGAAGAAAAAGAAGAGATGGTGGAGATTATaGAAATGTAGGAAAGTACGA | + |
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Preference number: 4 (lower is better) Translates to: GSQDLIKGGISRYGKKKKRWWRL*KCRKVR Trigger: TCGTACTTTCCTACATTTGCATAATCTCCACCATCT...CTTCTTTTTCTTCCCATACCTACTGATGCCTCCCTTGATTAAGTCTTGACTTCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000641768.1 |
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| CDS-3UTR CCA 90 bp | GAAAAAGAAGACGGTCCTGAGAGAATAGTGAAGAAAGACACTAGACAACTTGTAGGATCCTCAAGATGGTaGAGATTATGCAAATGTAGG | + |
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Preference number: 4 (lower is better) Translates to: EKEDGPERIVKKDTRQLVGSSRW*RLCKCR Trigger: CCTACATTTGCATAATCTCCACCATCTTGAGGATCC...TACAAGTTGTCTAGTGTCTTTCTTCACTATTCTCTCAGGACCGTCTTCTTTTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000641768.1 |
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| CDS-3UTR CCA 90 bp | TGTTTTATTAAGAAGGGCCTACTAAAGAAAGAAAGGTCAAAAGCATGGCTTAAGCAAAGAGGAAATTGGTaGCTGCCACTTGCTCCCTAT | + |
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Preference number: 4 (lower is better) Translates to: CFIKKGLLKKERSKAWLKQRGNW*LPLAPY Trigger: ATAGGGAGCAAGTGGCAGCCACCAATTTCCTCTTTG...CTTAAGCCATGCTTTTGACCTTTCTTTCTTTAGTAGGCCCTTCTTAATAAAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641768.1 |
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| CDS-3UTR TCA 90 bp | TGTTTTATTAAGAAGGGCCTACTAAAGAAAGAAAGGTCAAAAGCATGGCTTAAGCAGACTCTGAGAGACTaGTATGGGGCTGTTTTTAAG | + |
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Preference number: 4 (lower is better) Translates to: CFIKKGLLKKERSKAWLKQTLRD*YGAVFK Trigger: CTTAAAAACAGCCCCATATCAGTCTCTCAGAGTCTG...CTTAAGCCATGCTTTTGACCTTTCTTTCTTTAGTAGGCCCTTCTTAATAAAACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000641768.1 |
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| CDS-3UTR TCA 90 bp | GAAAAAGAAGACGGTCCTGAGAGAATAGTGAAGAAAGACACTAGACAACTTGTAAAAAGAAGACGGTCCTaGGAGAATAGTGAAGAAAGA | + |
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Preference number: 4 (lower is better) Translates to: EKEDGPERIVKKDTRQLVKRRRS*ENSEER Trigger: TCTTTCTTCACTATTCTCTCAGGACCGTCTTCTTTT...TACAAGTTGTCTAGTGTCTTTCTTCACTATTCTCTCAGGACCGTCTTCTTTTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000641768.1 |
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| CDS-3UTR CCA 90 bp | TGTTTTATTAAGAAGGGCCTACTAAAGAAAGAAAGGTCAAAAGCATGGCTTAAGAAGATAAATTGGCCTTaGCCCATGCAGCAGGTGATA | + |
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Preference number: 4 (lower is better) Translates to: CFIKKGLLKKERSKAWLKKINWP*PMQQVI Trigger: TATCACCTGCTGCATGGGCCAAGGCCAATTTATCTT...CTTAAGCCATGCTTTTGACCTTTCTTTCTTTAGTAGGCCCTTCTTAATAAAACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641768.1 |
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| CDS-3UTR TCA 90 bp | TGTTTTATTAAGAAGGGCCTACTAAAGAAAGAAAGGTCAAAAGCATGGCTTAAGGTGCTGATAAACTTCTaGGTGATGGGTTTTCTAGGT | + |
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Preference number: 4 (lower is better) Translates to: CFIKKGLLKKERSKAWLKVLINF*VMGFLG Trigger: ACCTAGAAAACCCATCACTCAGAAGTTTATCAGCAC...CTTAAGCCATGCTTTTGACCTTTCTTTCTTTAGTAGGCCCTTCTTAATAAAACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000641768.1 |
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| CDS-3UTR TCA 90 bp | CAATGTGAAGATAAATTGGCCTTGGCCCATGCAGCAGGTGATAAAATTAAAATTGTGAGGTTCAATAAGTaGGTTTACTATCCAAAGAGG | + |
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Preference number: 4 (lower is better) Translates to: QCEDKLALAHAAGDKIKIVRFNK*VYYPKR Trigger: CCTCTTTGGATAGTAAACTCACTTATTGAACCTCAC...AATTTTAATTTTATCACCTGCTGCATGGGCCAAGGCCAATTTATCTTCACATTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641768.1 |
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| CDS-3UTR TCA 90 bp | CAATGTGAAGATAAATTGGCCTTGGCCCATGCAGCAGGTGATAAAATTAAAATTAACACTGTACAACACTaGAACCAACCTATCTTTCTT | + |
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Preference number: 4 (lower is better) Translates to: QCEDKLALAHAAGDKIKINTVQH*NQPIFL Trigger: AAGAAAGATAGGTTGGTTTCAGTGTTGTACAGTGTT...AATTTTAATTTTATCACCTGCTGCATGGGCCAAGGCCAATTTATCTTCACATTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641768.1 |
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| CDS-3UTR GCA 90 bp | AGAATAAGTACACTTAGACTGGAGTGTATCAACTCTTCAATATCTGTCCCAACAAATGTCAACACTGTATaGACCACTGAGTTAAGGAAA | + |
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Preference number: 4 (lower is better) Translates to: RISTLRLECINSSISVPTNVNTV*TTELRK Trigger: TTTCCTTAACTCAGTGGTGCATACAGTGTTGACATT...TGTTGGGACAGATATTGAAGAGTTGATACACTCCAGTCTAAGTGTACTTATTCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641768.1 |
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| CDS TCA 90 bp | TACAGAGTCTGTGCTGATAAACTTCTGAGTGATGGGTTTTCTAGGTaGGTGCCAAGACTCTACTCAGTCCCTGAAGGCCAGTGCATGGGA | + |
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Preference number: 5 (lower is better) Translates to: YRVCADKLLSDGFSR*VPRLYSVPEGQCMG Trigger: TCCCATGCACTGGCCTTCAGGGACTGAGTAGAGTCTTGGCACTCACCTAGAAAACCCATCACTCAGAAGTTTATCAGCACAGACTCTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641768.1 |
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| CDS-3UTR CAA 90 bp | AGTCAAGACTTAATCAAGGGAGGCATCAGTAGGTATGGGAAGAAAAAGAAGACGGTTTCCTTTCAGGAATaGGGCAAAGAGAAGACCAGA | + |
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Preference number: 5 (lower is better) Translates to: SQDLIKGGISRYGKKKKTVSFQE*GKEKTR Trigger: TCTGGTCTTCTCTTTGCCCAATTCCTGAAAGGAAAC...CGTCTTCTTTTTCTTCCCATACCTACTGATGCCTCCCTTGATTAAGTCTTGACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000641768.1 |
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| CDS-3UTR CAA 90 bp | AGTCAAGACTTAATCAAGGGAGGCATCAGTAGGTATGGGAAGAAAAAGAAGACGAGCAGTGCCAACTCATaGACAGAAGTGTTTCCACAA | + |
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Preference number: 5 (lower is better) Translates to: SQDLIKGGISRYGKKKKTSSANS*TEVFPQ Trigger: TTGTGGAAACACTTCTGTCAATGAGTTGGCACTGCT...CGTCTTCTTTTTCTTCCCATACCTACTGATGCCTCCCTTGATTAAGTCTTGACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000641768.1 |
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| CDS-3UTR CAA 90 bp | AGAATAAGTACACTTAGACTGGAGTGTATCAACTCTTCAATATCTGTCCCAACAGAAGATAAATTGGCCTaGGCCCATGCAGCAGGTGAT | + |
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Preference number: 5 (lower is better) Translates to: RISTLRLECINSSISVPTEDKLA*AHAAGD Trigger: ATCACCTGCTGCATGGGCCAAGGCCAATTTATCTTC...TGTTGGGACAGATATTGAAGAGTTGATACACTCCAGTCTAAGTGTACTTATTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641768.1 |
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| CDS-3UTR CAA 90 bp | GAAAAAGAAGACGGTCCTGAGAGAATAGTGAAGAAAGACACTAGACAACTTGTACAATGTGAAGATAAATaGGCCTTGGCCCATGCAGCA | + |
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Preference number: 5 (lower is better) Translates to: EKEDGPERIVKKDTRQLVQCEDK*ALAHAA Trigger: TGCTGCATGGGCCAAGGCCAATTTATCTTCACATTG...TACAAGTTGTCTAGTGTCTTTCTTCACTATTCTCTCAGGACCGTCTTCTTTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000641768.1 |
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| CDS CCA 90 bp | ATCATATGCTGCAATAGCATGACCATTCTCTTTGTGCTCTTTTTCTaGACCTCCTTTCTAACAGATGTGCTGGGAAGTTCACAACGTATT | + |
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Preference number: 5 (lower is better) Translates to: IICCNSMTILFVLFF*TSFLTDVLGSSQRI Trigger: AATACGTTGTGAACTTCCCAGCACATCTGTTAGAAAGGAGGTCCAGAAAAAGAGCACAAAGAGAATGGTCATGCTATTGCAGCATATGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000418692.1 ENST00000441440.5 ENST00000458372.1 |
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| CDS-3UTR CAA 90 bp | AGAATAAGTACACTTAGACTGGAGTGTATCAACTCTTCAATATCTGTCCCAACAATTGGTGGCTGCCACTaGCTCCCTATAGTTTTGACA | + |
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Preference number: 5 (lower is better) Translates to: RISTLRLECINSSISVPTIGGCH*LPIVLT Trigger: TGTCAAAACTATAGGGAGCAAGTGGCAGCCACCAAT...TGTTGGGACAGATATTGAAGAGTTGATACACTCCAGTCTAAGTGTACTTATTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641768.1 |
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| CDS-3UTR CAA 90 bp | TGTTTTATTAAGAAGGGCCTACTAAAGAAAGAAAGGTCAAAAGCATGGCTTAAGTATCCAAAGAGGAAATaGGTGGCTGCCACTTGCTCC | + |
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Preference number: 5 (lower is better) Translates to: CFIKKGLLKKERSKAWLKYPKRK*VAATCS Trigger: GGAGCAAGTGGCAGCCACCAATTTCCTCTTTGGATA...CTTAAGCCATGCTTTTGACCTTTCTTTCTTTAGTAGGCCCTTCTTAATAAAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641768.1 |
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| CDS-3UTR CAA 90 bp | AGAATAAGTACACTTAGACTGGAGTGTATCAACTCTTCAATATCTGTCCCAACATCTTTAATGAGTAAGTaGAGATGGGCCGTACATATG | + |
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Preference number: 5 (lower is better) Translates to: RISTLRLECINSSISVPTSLMSK*RWAVHM Trigger: CATATGTACGGCCCATCTCAACTTACTCATTAAAGA...TGTTGGGACAGATATTGAAGAGTTGATACACTCCAGTCTAAGTGTACTTATTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641768.1 |
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| CDS GCA 72 bp | TTGCCACAGAAGGGCAGGCAGAATGTCAACACTGTATaGACCACTGAGTTAAGGAAACCAGCAGCCCAGCAT | + |
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Preference number: 6 (lower is better) Translates to: LPQKGRQNVNTV*TTELRKPAAQH Trigger: ATGCTGGGCTGCTGGTTTCCTTAACTCAGTGGTGCATACAGTGTTGACATTCTGCCTGCCCTTCTGTGGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENST00000230223.5 ENST00000377154.1 ENST00000400698.6 ENST00000418692.1 ENST00000421859.5 ENST00000441440.5 ENST00000444009.5 ENST00000446761.1 ENST00000458372.1 ENST00000548546.1 ENST00000549299.1 ENST00000550240.1 ENST00000641768.1 |
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| CDS TCA 72 bp | TACTCAGTCCCTGAAGGCCAGTGCATGGGACTGGAGTaGGTAAGGAAAATGCCCTTTGGATTAAGAAGATCC | + |
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Preference number: 6 (lower is better) Translates to: YSVPEGQCMGLE*VRKMPFGLRRS Trigger: GGATCTTCTTAATCCAAAGGGCATTTTCCTTACTCACTCCAGTCCCATGCACTGGCCTTCAGGGACTGAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641768.1 |
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| CDS TCA 72 bp | TGTGCTGATAAACTTCTGAGTGATGGGTTTTCTAGGTaGGTGCCAAGACTCTACTCAGTCCCTGAAGGCCAG | + |
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Preference number: 6 (lower is better) Translates to: CADKLLSDGFSR*VPRLYSVPEGQ Trigger: CTGGCCTTCAGGGACTGAGTAGAGTCTTGGCACTCACCTAGAAAACCCATCACTCAGAAGTTTATCAGCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641768.1 |
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| CDS CAA 72 bp | CCAATGAAGACCCCAGTGGATAGCAGTGCCAACTCATaGACAGAAGTGTTTCCACAAGACAAGATCAGCAAA | + |
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Preference number: 6 (lower is better) Translates to: PMKTPVDSSANS*TEVFPQDKISK Trigger: TTTGCTGATCTTGTCTTGTGGAAACACTTCTGTCAATGAGTTGGCACTGCTATCCACTGGGGTCTTCATTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENST00000230223.5 ENST00000377154.1 ENST00000400698.6 ENST00000418692.1 ENST00000421859.5 ENST00000441440.5 ENST00000444009.5 ENST00000446761.1 ENST00000458372.1 ENST00000548546.1 ENST00000549299.1 ENST00000550240.1 ENST00000641768.1 |
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| CDS TCA 72 bp | ATAATGTTCCCTACAGAGTCTGTGCTGATAAACTTCTaGGTGATGGGTTTTCTAGGTGAGTGCCAAGACTCT | + |
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Preference number: 6 (lower is better) Translates to: IMFPTESVLINF*VMGFLGECQDS Trigger: AGAGTCTTGGCACTCACCTAGAAAACCCATCACTCAGAAGTTTATCAGCACAGACTCTGTAGGGAACATTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641768.1 |
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| CDS CCA 72 bp | TGCAATAGCATGACCATTCTCTTTGTGCTCTTTTTCTaGACCTCCTTTCTAACAGATGTGCTGGGAAGTTCA | + |
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Preference number: 6 (lower is better) Translates to: CNSMTILFVLFF*TSFLTDVLGSS Trigger: TGAACTTCCCAGCACATCTGTTAGAAAGGAGGTCCAGAAAAAGAGCACAAAGAGAATGGTCATGCTATTGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000418692.1 ENST00000441440.5 ENST00000458372.1 |
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| CDS TCA 72 bp | TCAATAGGAACTTTAAAAACTTTAGGGAAGAAAAGATaGCATCTGAGTTCGCAGAAGCCGAAATATCGACCC | + |
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Preference number: 6 (lower is better) Translates to: SIGTLKTLGKKR*HLSSQKPKYRP Trigger: GGGTCGATATTTCGGCTTCTGCGAACTCAGATGTCATCTTTTCTTCCCTAAAGTTTTTAAAGTTCCTATTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENST00000377154.1 ENST00000400698.6 ENST00000421859.5 ENST00000444009.5 ENST00000446761.1 ENST00000451227.1 ENST00000453123.1 ENST00000458123.1 |
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| CDS TCA 72 bp | CCAGATTATAAAAATGAATCATATGCTGCAATAGCATaGCCATTCTCTTTGTGCTCTTTTTCTGGACCTCCT | + |
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Preference number: 6 (lower is better) Translates to: PDYKNESYAAIA*PFSLCSFSGPP Trigger: AGGAGGTCCAGAAAAAGAGCACAAAGAGAATGGTCATGCTATTGCAGCATATGATTCATTTTTATAATCTGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000418692.1 ENST00000441440.5 ENST00000458372.1 |
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| CDS TCA 72 bp | ATTGGAGATATTGAGCAGAGATTACCATTCAGACTCTaGGAGACTGATATGGGGCTGTTTTTAAGAATACAA | + |
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Preference number: 6 (lower is better) Translates to: IGDIEQRLPFRL*ETDMGLFLRIQ Trigger: TTGTATTCTTAAAAACAGCCCCATATCAGTCTCTCAGAGTCTGAATGGTAATCTCTGCTCAATATCTCCAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000641768.1 |
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