RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OR5AU1 (Homo sapiens)

Ensembl gene IDs: ENSG00000169327

Ensembl transcript IDs: ENST00000304418.5, ENST00000641039.1, ENST00000641697.1, ENST00000641822.1

Found 272 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGCACCTGGGCTGGTGTGAGCTGGTCACCCATACATCTGGCACTTTaGTGGAGAAGGCTGGGCTCAGCTGGGAGCCTCAACTGGAGTGTC +
Preference number: 1 (lower is better)
Translates to: GTWAGVSWSPIHLAL*WRRLGSAGSLNWSV
Trigger: GACACTCCAGTTGAGGCTCCCAGCTGAGCCCAGCCTTCTCCATCAAAGTGCCAGATGTATGGGTGACCAGCTCACACCAGCCCAGGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
3UTR CCA 90 bp GTCACCCATACATCTGGCACTTTGATGGAGAAGGCTGGGCTCAGCTaGGAGCCTCAACTGGAGTGTCTACACATGGCCTCTCTAGCATTA +
Preference number: 1 (lower is better)
Translates to: VTHTSGTLMEKAGLS*EPQLECLHMASLAL
Trigger: TAATGCTAGAGAGGCCATGTGTAGACACTCCAGTTGAGGCTCCCAGCTGAGCCCAGCCTTCTCCATCAAAGTGCCAGATGTATGGGTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
3UTR GCA 90 bp GGCTCAGGGATCCCAGAGAGTGTTCCCAGACAGCTGTGCCAAAGGTaGAAGTCCTCTTATGACCTAAGCTCAGAAGTCCTAATATCTGCT +
Preference number: 1 (lower is better)
Translates to: GSGIPESVPRQLCQR*KSSYDLSSEVLISA
Trigger: AGCAGATATTAGGACTTCTGAGCTTAGGTCATAAGAGGACTTGCACCTTTGGCACAGCTGTCTGGGAACACTCTCTGGGATCCCTGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
3UTR CCA 90 bp GACAGTAACAAAGGTTACTTTGTGGTATTCAGCTGGCACCTGGGCTaGTGTGAGCTGGTCACCCATACATCTGGCACTTTGATGGAGAAG +
Preference number: 1 (lower is better)
Translates to: DSNKGYFVVFSWHLG*CELVTHTSGTLMEK
Trigger: CTTCTCCATCAAAGTGCCAGATGTATGGGTGACCAGCTCACACCAGCCCAGGTGCCAGCTGAATACCACAAAGTAACCTTTGTTACTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
3UTR CCA 90 bp ACATTCTCCTCATTGACCTTCAAGCTTTCACTATCAGTCTCTTCATaGCCCTTCCAGTTTCTGCCCACTGCCCAGTACCAATGTCAATGC +
Preference number: 1 (lower is better)
Translates to: TFSSLTFKLSLSVSS*PFQFLPTAQYQCQC
Trigger: GCATTGACATTGGTACTGGGCAGTGGGCAGAAACTGGAAGGGCCATGAAGAGACTGATAGTGAAAGCTTGAAGGTCAATGAGGAGAATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
3UTR GCA 90 bp GCTTTCACTATCAGTCTCTTCATGGCCCTTCCAGTTTCTGCCCACTaGCCAGTACCAATGTCAATGCCACATGTTTTTGTTACAAAAGCA +
Preference number: 1 (lower is better)
Translates to: AFTISLFMALPVSAH*PVPMSMPHVFVTKA
Trigger: TGCTTTTGTAACAAAAACATGTGGCATTGACATTGGTACTGGGCAGTGGGCAGAAACTGGAAGGGCCATGAAGAGACTGATAGTGAAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
3UTR GCA 90 bp AGTTTGAATGAGGCTCAACTTATTAATTTGTTCTTTTATAGATCATaGTTCCTGTGTCATATCTCAGAAATCTTTGGCTACCTCAAGGTC +
Preference number: 1 (lower is better)
Translates to: SLNEAQLINLFFYRS*FLCHISEIFGYLKV
Trigger: GACCTTGAGGTAGCCAAAGATTTCTGAGATATGACACAGGAAGCATGATCTATAAAAGAACAAATTAATAAGTTGAGCCTCATTCAAACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
3UTR CAA 90 bp TGGCACCTGGGCTGGTGTGAGCTGGTCACCCATACATCTGGCACTTaGATGGAGAAGGCTGGGCTCAGCTGGGAGCCTCAACTGGAGTGT +
Preference number: 2 (lower is better)
Translates to: WHLGWCELVTHTSGT*MEKAGLSWEPQLEC
Trigger: ACACTCCAGTTGAGGCTCCCAGCTGAGCCCAGCCTTCTCCATCAAAGTGCCAGATGTATGGGTGACCAGCTCACACCAGCCCAGGTGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
3UTR-3UTR CCA 90 bp GCCAGACTTCTTATGTGGCGGCTCAGGGATCCCAGAGAGTGTTCCCAGACAGCTCAGGCTGGAGTCCAGTaGCACAATCACGGCTCACTG +
Preference number: 2 (lower is better)
Translates to: ARLLMWRLRDPRECSQTAQAGVQ*HNHGSL
Trigger: CAGTGAGCCGTGATTGTGCCACTGGACTCCAGCCTG...AGCTGTCTGGGAACACTCTCTGGGATCCCTGAGCCGCCACATAAGAAGTCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
3UTR-3UTR TCA 90 bp GCCAGACTTCTTATGTGGCGGCTCAGGGATCCCAGAGAGTGTTCCCAGACAGCTGGCTGGTTGGTTAGCTaGCAAGCATTACCTGAGCAG +
Preference number: 2 (lower is better)
Translates to: ARLLMWRLRDPRECSQTAGWLVS*QALPEQ
Trigger: CTGCTCAGGTAATGCTTGTCAGCTAACCAACCAGCC...AGCTGTCTGGGAACACTCTCTGGGATCCCTGAGCCGCCACATAAGAAGTCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
3UTR-3UTR TCA 90 bp GCCAGACTTCTTATGTGGCGGCTCAGGGATCCCAGAGAGTGTTCCCAGACAGCTGGTGGGAGAATCACTTaGGCTCAAGAGTGCAAGACC +
Preference number: 2 (lower is better)
Translates to: ARLLMWRLRDPRECSQTAGGRIT*AQECKT
Trigger: GGTCTTGCACTCTTGAGCTCAAGTGATTCTCCCACC...AGCTGTCTGGGAACACTCTCTGGGATCCCTGAGCCGCCACATAAGAAGTCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
3UTR-3UTR GCA 90 bp GCCAGACTTCTTATGTGGCGGCTCAGGGATCCCAGAGAGTGTTCCCAGACAGCTCCGAGATCACACCATTaGACTCCAACCTGGGCAACA +
Preference number: 2 (lower is better)
Translates to: ARLLMWRLRDPRECSQTAPRSHH*TPTWAT
Trigger: TGTTGCCCAGGTTGGAGTGCAATGGTGTGATCTCGG...AGCTGTCTGGGAACACTCTCTGGGATCCCTGAGCCGCCACATAAGAAGTCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
3UTR-3UTR GCA 90 bp GCCAGACTTCTTATGTGGCGGCTCAGGGATCCCAGAGAGTGTTCCCAGACAGCTCATGCCTGTAATCCCTaGATTTTGGGAGGCCGAAGT +
Preference number: 2 (lower is better)
Translates to: ARLLMWRLRDPRECSQTAHACNP*ILGGRS
Trigger: ACTTCGGCCTCCCAAAATGCAGGGATTACAGGCATG...AGCTGTCTGGGAACACTCTCTGGGATCCCTGAGCCGCCACATAAGAAGTCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
3UTR-3UTR CCA 90 bp GCCAGACTTCTTATGTGGCGGCTCAGGGATCCCAGAGAGTGTTCCCAGACAGCTCAATATTCACAGGGGTaGGCATGGGAATGTGCTCAG +
Preference number: 2 (lower is better)
Translates to: ARLLMWRLRDPRECSQTAQYSQG*AWECAQ
Trigger: CTGAGCACATTCCCATGCCCACCCCTGTGAATATTG...AGCTGTCTGGGAACACTCTCTGGGATCCCTGAGCCGCCACATAAGAAGTCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
3UTR-3UTR TCA 90 bp TCCAGTTTCTGCCCACTGCCCAGTACCAATGTCAATGCCACATGTTTTTGTTACGCACCTGGGCTGGTGTaGGCTGGTCACCCATACATC +
Preference number: 2 (lower is better)
Translates to: SSFCPLPSTNVNATCFCYAPGLV*AGHPYI
Trigger: GATGTATGGGTGACCAGCTCACACCAGCCCAGGTGC...GTAACAAAAACATGTGGCATTGACATTGGTACTGGGCAGTGGGCAGAAACTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
3UTR-3UTR GCA 90 bp CATTCCCACCAGCAGTGTATTAGAGTTCCAGTTGCTTCTCATCCTCACCATCACATGTTCATGCCACTGTaGTCCAGCCTCGGGGGTGGA +
Preference number: 2 (lower is better)
Translates to: HSHQQCIRVPVASHPHHHMFMPL*SSLGGG
Trigger: TCCACCCCCGAGGCTGGAGCACAGTGGCATGAACAT...GTGATGGTGAGGATGAGAAGCAACTGGAACTCTAATACACTGCTGGTGGGAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
3UTR-3UTR GCA 90 bp CATTCCCACCAGCAGTGTATTAGAGTTCCAGTTGCTTCTCATCCTCACCATCACGCAGACCAGAGGGCATaGCCAATATTCACAGGGGTG +
Preference number: 2 (lower is better)
Translates to: HSHQQCIRVPVASHPHHHADQRA*PIFTGV
Trigger: CACCCCTGTGAATATTGGGCATGCCCTCTGGTCTGC...GTGATGGTGAGGATGAGAAGCAACTGGAACTCTAATACACTGCTGGTGGGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
3UTR-3UTR TCA 90 bp GCCAGACTTCTTATGTGGCGGCTCAGGGATCCCAGAGAGTGTTCCCAGACAGCTTCCTATGCCATTTGTTaGAAAGACTGTTCTTTCCCT +
Preference number: 2 (lower is better)
Translates to: ARLLMWRLRDPRECSQTASYAIC*KDCSFP
Trigger: AGGGAAAGAACAGTCTTTTCAACAAATGGCATAGGA...AGCTGTCTGGGAACACTCTCTGGGATCCCTGAGCCGCCACATAAGAAGTCTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
3UTR-3UTR TCA 90 bp CATTCCCACCAGCAGTGTATTAGAGTTCCAGTTGCTTCTCATCCTCACCATCACGCCTCCTCTAAATCCTaGGCCCAAGTGATCCTCTTG +
Preference number: 2 (lower is better)
Translates to: HSHQQCIRVPVASHPHHHASSKS*AQVILL
Trigger: CAAGAGGATCACTTGGGCTCAGGATTTAGAGGAGGC...GTGATGGTGAGGATGAGAAGCAACTGGAACTCTAATACACTGCTGGTGGGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
3UTR-3UTR TCA 90 bp CATTCCCACCAGCAGTGTATTAGAGTTCCAGTTGCTTCTCATCCTCACCATCACGTGTCTATCCACAGGTaGGATCATCACACTGCAGCC +
Preference number: 2 (lower is better)
Translates to: HSHQQCIRVPVASHPHHHVSIHR*DHHTAA
Trigger: GGCTGCAGTGTGATGATCTCACCTGTGGATAGACAC...GTGATGGTGAGGATGAGAAGCAACTGGAACTCTAATACACTGCTGGTGGGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
3UTR-3UTR TCA 90 bp CATTCCCACCAGCAGTGTATTAGAGTTCCAGTTGCTTCTCATCCTCACCATCACAGGTTGAGGCTGCAATaGGCAATGTTCATGCCACTG +
Preference number: 2 (lower is better)
Translates to: HSHQQCIRVPVASHPHHHRLRLQ*AMFMPL
Trigger: CAGTGGCATGAACATTGCTCATTGCAGCCTCAACCT...GTGATGGTGAGGATGAGAAGCAACTGGAACTCTAATACACTGCTGGTGGGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
3UTR-3UTR TCA 90 bp GCCAGACTTCTTATGTGGCGGCTCAGGGATCCCAGAGAGTGTTCCCAGACAGCTGATTATTCCAATCCATaGATATTGAAGGTCTCTCCA +
Preference number: 2 (lower is better)
Translates to: ARLLMWRLRDPRECSQTADYSNP*ILKVSP
Trigger: TGGAGAGACCTTCAATATTCATGGATTGGAATAATC...AGCTGTCTGGGAACACTCTCTGGGATCCCTGAGCCGCCACATAAGAAGTCTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
3UTR-3UTR TCA 90 bp TCCAGTTTCTGCCCACTGCCCAGTACCAATGTCAATGCCACATGTTTTTGTTACGTGTCTATCCACAGGTaGGATCATCACACTGCAGCC +
Preference number: 2 (lower is better)
Translates to: SSFCPLPSTNVNATCFCYVSIHR*DHHTAA
Trigger: GGCTGCAGTGTGATGATCTCACCTGTGGATAGACAC...GTAACAAAAACATGTGGCATTGACATTGGTACTGGGCAGTGGGCAGAAACTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
3UTR-3UTR CCA 90 bp GCCAGACTTCTTATGTGGCGGCTCAGGGATCCCAGAGAGTGTTCCCAGACAGCTTCCACATTTTGTTTGTaGTCAAATTGTGGTCTCTCT +
Preference number: 2 (lower is better)
Translates to: ARLLMWRLRDPRECSQTASTFCL*SNCGLS
Trigger: AGAGAGACCACAATTTGACCACAAACAAAATGTGGA...AGCTGTCTGGGAACACTCTCTGGGATCCCTGAGCCGCCACATAAGAAGTCTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
3UTR-3UTR TCA 90 bp CATTCCCACCAGCAGTGTATTAGAGTTCCAGTTGCTTCTCATCCTCACCATCACGAAAAAGAAGAAGAATaGCAGGCCAGCATGGTGGCT +
Preference number: 2 (lower is better)
Translates to: HSHQQCIRVPVASHPHHHEKEEE*QASMVA
Trigger: AGCCACCATGCTGGCCTGTCATTCTTCTTCTTTTTC...GTGATGGTGAGGATGAGAAGCAACTGGAACTCTAATACACTGCTGGTGGGAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
3UTR-3UTR TCA 90 bp TCCAGTTTCTGCCCACTGCCCAGTACCAATGTCAATGCCACATGTTTTTGTTACATACATCTGGCACTTTaGTGGAGAAGGCTGGGCTCA +
Preference number: 2 (lower is better)
Translates to: SSFCPLPSTNVNATCFCYIHLAL*WRRLGS
Trigger: TGAGCCCAGCCTTCTCCATCAAAGTGCCAGATGTAT...GTAACAAAAACATGTGGCATTGACATTGGTACTGGGCAGTGGGCAGAAACTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
3UTR-3UTR CCA 90 bp TCCAGTTTCTGCCCACTGCCCAGTACCAATGTCAATGCCACATGTTTTTGTTACAGGGTCTTCTCTCCTTaGTTGGCTGGTTGGTTAGCT +
Preference number: 2 (lower is better)
Translates to: SSFCPLPSTNVNATCFCYRVFSP*LAGWLA
Trigger: AGCTAACCAACCAGCCAACCAAGGAGAGAAGACCCT...GTAACAAAAACATGTGGCATTGACATTGGTACTGGGCAGTGGGCAGAAACTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
3UTR-3UTR CCA 90 bp GCCAGACTTCTTATGTGGCGGCTCAGGGATCCCAGAGAGTGTTCCCAGACAGCTAACTGTTTTCCAACGTaGTTTTACCATTTCACATTC +
Preference number: 2 (lower is better)
Translates to: ARLLMWRLRDPRECSQTANCFPT*FYHFTF
Trigger: GAATGTGAAATGGTAAAACCACGTTGGAAAACAGTT...AGCTGTCTGGGAACACTCTCTGGGATCCCTGAGCCGCCACATAAGAAGTCTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
3UTR-3UTR TCA 90 bp TCCAGTTTCTGCCCACTGCCCAGTACCAATGTCAATGCCACATGTTTTTGTTACGTGCAAGTCCTCTTATaGCCTAAGCTCAGAAGTCCT +
Preference number: 2 (lower is better)
Translates to: SSFCPLPSTNVNATCFCYVQVLL*PKLRSP
Trigger: AGGACTTCTGAGCTTAGGTCATAAGAGGACTTGCAC...GTAACAAAAACATGTGGCATTGACATTGGTACTGGGCAGTGGGCAGAAACTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
3UTR-3UTR TCA 90 bp TGTGAATCTAATGTAGCCGTATCTCTCAGTATATGCAGCCAAATAAACCATTTGGCACCTGGGCTGGTGTaGGCTGGTCACCCATACATC +
Preference number: 2 (lower is better)
Translates to: CESNVAVSLSICSQINHLAPGLV*AGHPYI
Trigger: GATGTATGGGTGACCAGCTCACACCAGCCCAGGTGC...CAAATGGTTTATTTGGCTGCATATACTGAGAGATACGGCTACATTAGATTCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
3UTR-3UTR TCA 90 bp CATTCCCACCAGCAGTGTATTAGAGTTCCAGTTGCTTCTCATCCTCACCATCACATCTTGCCAACAGGTTaGATTATGCAACAAGCAGAC +
Preference number: 2 (lower is better)
Translates to: HSHQQCIRVPVASHPHHHILPTG*IMQQAD
Trigger: GTCTGCTTGTTGCATAATTCAACCTGTTGGCAAGAT...GTGATGGTGAGGATGAGAAGCAACTGGAACTCTAATACACTGCTGGTGGGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
3UTR-3UTR GCA 90 bp TGTGAATCTAATGTAGCCGTATCTCTCAGTATATGCAGCCAAATAAACCATTTGATGTTCATGCCACTGTaGTCCAGCCTCGGGGGTGGA +
Preference number: 2 (lower is better)
Translates to: CESNVAVSLSICSQINHLMFMPL*SSLGGG
Trigger: TCCACCCCCGAGGCTGGAGCACAGTGGCATGAACAT...CAAATGGTTTATTTGGCTGCATATACTGAGAGATACGGCTACATTAGATTCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
3UTR-3UTR CCA 90 bp TGTGAATCTAATGTAGCCGTATCTCTCAGTATATGCAGCCAAATAAACCATTTGTCACAGGGGTGGGCATaGGAATGTGCTCAGGGTGAC +
Preference number: 2 (lower is better)
Translates to: CESNVAVSLSICSQINHLSQGWA*ECAQGD
Trigger: GTCACCCTGAGCACATTCCCATGCCCACCCCTGTGA...CAAATGGTTTATTTGGCTGCATATACTGAGAGATACGGCTACATTAGATTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
3UTR-3UTR CCA 90 bp TGTTCCATTGATCTATTTCTACAGCAATCACACTGTCTTGATTACTGTAGCCATTCACAGGGGTGGGCATaGGAATGTGCTCAGGGTGAC +
Preference number: 2 (lower is better)
Translates to: CSIDLFLQQSHCLDYCSHSQGWA*ECAQGD
Trigger: GTCACCCTGAGCACATTCCCATGCCCACCCCTGTGA...ATGGCTACAGTAATCAAGACAGTGTGATTGCTGTAGAAATAGATCAATGGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
3UTR-3UTR CCA 90 bp TGTGAATCTAATGTAGCCGTATCTCTCAGTATATGCAGCCAAATAAACCATTTGAAGGCTGGGCTCAGCTaGGAGCCTCAACTGGAGTGT +
Preference number: 2 (lower is better)
Translates to: CESNVAVSLSICSQINHLKAGLS*EPQLEC
Trigger: ACACTCCAGTTGAGGCTCCCAGCTGAGCCCAGCCTT...CAAATGGTTTATTTGGCTGCATATACTGAGAGATACGGCTACATTAGATTCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
3UTR-3UTR TCA 90 bp TGTTCCATTGATCTATTTCTACAGCAATCACACTGTCTTGATTACTGTAGCCATAGTGGGCAGATCACCTaGGGTCAGGAGTTCAAGACC +
Preference number: 2 (lower is better)
Translates to: CSIDLFLQQSHCLDYCSHSGQIT*GQEFKT
Trigger: GGTCTTGAACTCCTGACCTCAGGTGATCTGCCCACT...ATGGCTACAGTAATCAAGACAGTGTGATTGCTGTAGAAATAGATCAATGGAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
3UTR-3UTR TCA 90 bp CATTCCCACCAGCAGTGTATTAGAGTTCCAGTTGCTTCTCATCCTCACCATCACGATTATTCCAATCCATaGATATTGAAGGTCTCTCCA +
Preference number: 2 (lower is better)
Translates to: HSHQQCIRVPVASHPHHHDYSNP*ILKVSP
Trigger: TGGAGAGACCTTCAATATTCATGGATTGGAATAATC...GTGATGGTGAGGATGAGAAGCAACTGGAACTCTAATACACTGCTGGTGGGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
3UTR-3UTR CCA 90 bp CATTCCCACCAGCAGTGTATTAGAGTTCCAGTTGCTTCTCATCCTCACCATCACTTTGTGGTCAAATTGTaGTCTCTCTATTCTGTTCCA +
Preference number: 2 (lower is better)
Translates to: HSHQQCIRVPVASHPHHHFVVKL*SLYSVP
Trigger: TGGAACAGAATAGAGAGACCACAATTTGACCACAAA...GTGATGGTGAGGATGAGAAGCAACTGGAACTCTAATACACTGCTGGTGGGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
3UTR-3UTR CCA 90 bp CATTCCCACCAGCAGTGTATTAGAGTTCCAGTTGCTTCTCATCCTCACCATCACTTTTCTTATAACCTGTaGCTTCTCTTTGTGTGTGTG +
Preference number: 2 (lower is better)
Translates to: HSHQQCIRVPVASHPHHHFSYNL*LLFVCV
Trigger: CACACACACAAAGAGAAGCCACAGGTTATAAGAAAA...GTGATGGTGAGGATGAGAAGCAACTGGAACTCTAATACACTGCTGGTGGGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
3UTR-3UTR TCA 90 bp TCCAGTTTCTGCCCACTGCCCAGTACCAATGTCAATGCCACATGTTTTTGTTACACTAACTGGGAAAAATaGATGAAGCATCTCAACATG +
Preference number: 2 (lower is better)
Translates to: SSFCPLPSTNVNATCFCYTNWEK*MKHLNM
Trigger: CATGTTGAGATGCTTCATTCATTTTTCCCAGTTAGT...GTAACAAAAACATGTGGCATTGACATTGGTACTGGGCAGTGGGCAGAAACTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
3UTR-3UTR TCA 90 bp TCCAGTTTCTGCCCACTGCCCAGTACCAATGTCAATGCCACATGTTTTTGTTACTCCAAAACTTTCCAATaGCTTCAAACAACAGGGATT +
Preference number: 2 (lower is better)
Translates to: SSFCPLPSTNVNATCFCYSKTFQ*LQTTGI
Trigger: AATCCCTGTTGTTTGAAGTCATTGGAAAGTTTTGGA...GTAACAAAAACATGTGGCATTGACATTGGTACTGGGCAGTGGGCAGAAACTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
3UTR-3UTR GCA 90 bp TCCAGTTTCTGCCCACTGCCCAGTACCAATGTCAATGCCACATGTTTTTGTTACATCCTCACCATCACTTaGTATAGTCAATCTTGTTCA +
Preference number: 2 (lower is better)
Translates to: SSFCPLPSTNVNATCFCYILTIT*YSQSCS
Trigger: TGAACAAGATTGACTATAGCAAGTGATGGTGAGGAT...GTAACAAAAACATGTGGCATTGACATTGGTACTGGGCAGTGGGCAGAAACTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
3UTR-3UTR CCA 90 bp TGTGAATCTAATGTAGCCGTATCTCTCAGTATATGCAGCCAAATAAACCATTTGCAATATTCACAGGGGTaGGCATGGGAATGTGCTCAG +
Preference number: 2 (lower is better)
Translates to: CESNVAVSLSICSQINHLQYSQG*AWECAQ
Trigger: CTGAGCACATTCCCATGCCCACCCCTGTGAATATTG...CAAATGGTTTATTTGGCTGCATATACTGAGAGATACGGCTACATTAGATTCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
3UTR-3UTR CCA 90 bp CATTCCCACCAGCAGTGTATTAGAGTTCCAGTTGCTTCTCATCCTCACCATCACTGGTGGGATTTTGATTaGGATAGAATTGAATCTCAA +
Preference number: 2 (lower is better)
Translates to: HSHQQCIRVPVASHPHHHWWDFD*DRIESQ
Trigger: TTGAGATTCAATTCTATCCCAATCAAAATCCCACCA...GTGATGGTGAGGATGAGAAGCAACTGGAACTCTAATACACTGCTGGTGGGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
3UTR-3UTR CCA 90 bp TCCAGTTTCTGCCCACTGCCCAGTACCAATGTCAATGCCACATGTTTTTGTTACTTTGTGGTCAAATTGTaGTCTCTCTATTCTGTTCCA +
Preference number: 2 (lower is better)
Translates to: SSFCPLPSTNVNATCFCYFVVKL*SLYSVP
Trigger: TGGAACAGAATAGAGAGACCACAATTTGACCACAAA...GTAACAAAAACATGTGGCATTGACATTGGTACTGGGCAGTGGGCAGAAACTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
3UTR-3UTR CCA 90 bp TCCAGTTTCTGCCCACTGCCCAGTACCAATGTCAATGCCACATGTTTTTGTTACTCCACATTTTGTTTGTaGTCAAATTGTGGTCTCTCT +
Preference number: 2 (lower is better)
Translates to: SSFCPLPSTNVNATCFCYSTFCL*SNCGLS
Trigger: AGAGAGACCACAATTTGACCACAAACAAAATGTGGA...GTAACAAAAACATGTGGCATTGACATTGGTACTGGGCAGTGGGCAGAAACTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
3UTR-3UTR TCA 90 bp TGTGAATCTAATGTAGCCGTATCTCTCAGTATATGCAGCCAAATAAACCATTTGGAAAAAGAAGAAGAATaGCAGGCCAGCATGGTGGCT +
Preference number: 2 (lower is better)
Translates to: CESNVAVSLSICSQINHLEKEEE*QASMVA
Trigger: AGCCACCATGCTGGCCTGTCATTCTTCTTCTTTTTC...CAAATGGTTTATTTGGCTGCATATACTGAGAGATACGGCTACATTAGATTCACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
3UTR-3UTR CCA 90 bp TCCAGTTTCTGCCCACTGCCCAGTACCAATGTCAATGCCACATGTTTTTGTTACTGGTGGGATTTTGATTaGGATAGAATTGAATCTCAA +
Preference number: 2 (lower is better)
Translates to: SSFCPLPSTNVNATCFCYWWDFD*DRIESQ
Trigger: TTGAGATTCAATTCTATCCCAATCAAAATCCCACCA...GTAACAAAAACATGTGGCATTGACATTGGTACTGGGCAGTGGGCAGAAACTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
3UTR CAA 90 bp CACATTTTGTTTGTGGTCAAATTGTGGTCTCTCTATTCTGTTCCATaGATCTATTTCTACAGCAATCACACTGTCTTGATTACTGTAGCC +
Preference number: 2 (lower is better)
Translates to: HILFVVKLWSLYSVP*IYFYSNHTVLITVA
Trigger: GGCTACAGTAATCAAGACAGTGTGATTGCTGTAGAAATAGATCAATGGAACAGAATAGAGAGACCACAATTTGACCACAAACAAAATGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
3UTR-3UTR TCA 90 bp TGTGAATCTAATGTAGCCGTATCTCTCAGTATATGCAGCCAAATAAACCATTTGTGCCTCTTTTCTTACTaGGATGTTTTTATGGAGCTT +
Preference number: 2 (lower is better)
Translates to: CESNVAVSLSICSQINHLCLFSY*DVFMEL
Trigger: AAGCTCCATAAAAACATCTCAGTAAGAAAAGAGGCA...CAAATGGTTTATTTGGCTGCATATACTGAGAGATACGGCTACATTAGATTCACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
3UTR-3UTR TCA 90 bp TGTGAATCTAATGTAGCCGTATCTCTCAGTATATGCAGCCAAATAAACCATTTGATGGTAGGTATCTATTaGACATTTTGTGAAACCACC +
Preference number: 2 (lower is better)
Translates to: CESNVAVSLSICSQINHLMVGIY*TFCETT
Trigger: GGTGGTTTCACAAAATGTTCAATAGATACCTACCAT...CAAATGGTTTATTTGGCTGCATATACTGAGAGATACGGCTACATTAGATTCACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
3UTR-3UTR TCA 90 bp TGTGAATCTAATGTAGCCGTATCTCTCAGTATATGCAGCCAAATAAACCATTTGCTCCCAACTTCCAAGTaGCTAATTCATTTCTTGTTA +
Preference number: 2 (lower is better)
Translates to: CESNVAVSLSICSQINHLLPTSK*LIHFLL
Trigger: TAACAAGAAATGAATTAGTCACTTGGAAGTTGGGAG...CAAATGGTTTATTTGGCTGCATATACTGAGAGATACGGCTACATTAGATTCACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
3UTR-3UTR CCA 90 bp TGTGAATCTAATGTAGCCGTATCTCTCAGTATATGCAGCCAAATAAACCATTTGTTTTCTTATAACCTGTaGCTTCTCTTTGTGTGTGTG +
Preference number: 2 (lower is better)
Translates to: CESNVAVSLSICSQINHLFSYNL*LLFVCV
Trigger: CACACACACAAAGAGAAGCCACAGGTTATAAGAAAA...CAAATGGTTTATTTGGCTGCATATACTGAGAGATACGGCTACATTAGATTCACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
3UTR-3UTR CCA 90 bp TGTGAATCTAATGTAGCCGTATCTCTCAGTATATGCAGCCAAATAAACCATTTGAACTGTTTTCCAACGTaGTTTTACCATTTCACATTC +
Preference number: 2 (lower is better)
Translates to: CESNVAVSLSICSQINHLNCFPT*FYHFTF
Trigger: GAATGTGAAATGGTAAAACCACGTTGGAAAACAGTT...CAAATGGTTTATTTGGCTGCATATACTGAGAGATACGGCTACATTAGATTCACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
3UTR-3UTR CAA 90 bp GCCAGACTTCTTATGTGGCGGCTCAGGGATCCCAGAGAGTGTTCCCAGACAGCTCAGGATCTTGCCCTGTaGTCCAGGCTGGAGTCCAGT +
Preference number: 3 (lower is better)
Translates to: ARLLMWRLRDPRECSQTAQDLAL*SRLESS
Trigger: ACTGGACTCCAGCCTGGACAACAGGGCAAGATCCTG...AGCTGTCTGGGAACACTCTCTGGGATCCCTGAGCCGCCACATAAGAAGTCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
3UTR TCA 72 bp GCTGGTGTGAGCTGGTCACCCATACATCTGGCACTTTaGTGGAGAAGGCTGGGCTCAGCTGGGAGCCTCAAC +
Preference number: 3 (lower is better)
Translates to: AGVSWSPIHLAL*WRRLGSAGSLN
Trigger: GTTGAGGCTCCCAGCTGAGCCCAGCCTTCTCCATCAAAGTGCCAGATGTATGGGTGACCAGCTCACACCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
3UTR-3UTR CAA 90 bp GCCAGACTTCTTATGTGGCGGCTCAGGGATCCCAGAGAGTGTTCCCAGACAGCTGAGGGTCTTCTCTCCTaGGTTGGCTGGTTGGTTAGC +
Preference number: 3 (lower is better)
Translates to: ARLLMWRLRDPRECSQTAEGLLS*VGWLVS
Trigger: GCTAACCAACCAGCCAACCAAGGAGAGAAGACCCTC...AGCTGTCTGGGAACACTCTCTGGGATCCCTGAGCCGCCACATAAGAAGTCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
3UTR-3UTR CAA 90 bp GCCAGACTTCTTATGTGGCGGCTCAGGGATCCCAGAGAGTGTTCCCAGACAGCTGTCTTCTCTCCTTGGTaGGCTGGTTGGTTAGCTGAC +
Preference number: 3 (lower is better)
Translates to: ARLLMWRLRDPRECSQTAVFSPW*AGWLAD
Trigger: GTCAGCTAACCAACCAGCCAACCAAGGAGAGAAGAC...AGCTGTCTGGGAACACTCTCTGGGATCCCTGAGCCGCCACATAAGAAGTCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
3UTR CCA 72 bp ACATCTGGCACTTTGATGGAGAAGGCTGGGCTCAGCTaGGAGCCTCAACTGGAGTGTCTACACATGGCCTCT +
Preference number: 3 (lower is better)
Translates to: TSGTLMEKAGLS*EPQLECLHMAS
Trigger: AGAGGCCATGTGTAGACACTCCAGTTGAGGCTCCCAGCTGAGCCCAGCCTTCTCCATCAAAGTGCCAGATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
3UTR CCA 72 bp GGTCACCCATACATCTGGCACTTTGATGGAGAAGGCTaGGCTCAGCTGGGAGCCTCAACTGGAGTGTCTACA +
Preference number: 3 (lower is better)
Translates to: GHPYIWHFDGEG*AQLGASTGVST
Trigger: TGTAGACACTCCAGTTGAGGCTCCCAGCTGAGCCCAGCCTTCTCCATCAAAGTGCCAGATGTATGGGTGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
3UTR-3UTR CAA 90 bp GCCAGACTTCTTATGTGGCGGCTCAGGGATCCCAGAGAGTGTTCCCAGACAGCTCTGTCCACATTTTGTTaGTGGTCAAATTGTGGTCTC +
Preference number: 3 (lower is better)
Translates to: ARLLMWRLRDPRECSQTALSTFC*WSNCGL
Trigger: GAGACCACAATTTGACCACAAACAAAATGTGGACAG...AGCTGTCTGGGAACACTCTCTGGGATCCCTGAGCCGCCACATAAGAAGTCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
3UTR TCA 72 bp TTACTTTGTGGTATTCAGCTGGCACCTGGGCTGGTGTaGGCTGGTCACCCATACATCTGGCACTTTGATGGA +
Preference number: 3 (lower is better)
Translates to: LLCGIQLAPGLV*AGHPYIWHFDG
Trigger: TCCATCAAAGTGCCAGATGTATGGGTGACCAGCTCACACCAGCCCAGGTGCCAGCTGAATACCACAAAGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
3UTR CCA 72 bp AGGAAGAAAGGGAGGTGGGGAGGGAGGGAGGGAGGGTaGGAAAGGAAAGGAAATACACTAACTGGGAAAAAT +
Preference number: 3 (lower is better)
Translates to: RKKGRWGGREGG*ERKGNTLTGKN
Trigger: ATTTTTCCCAGTTAGTGTATTTCCTTTCCTTTCCCACCCTCCCTCCCTCCCTCCCCACCTCCCTTTCTTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
3UTR CCA 72 bp AAAGGTTACTTTGTGGTATTCAGCTGGCACCTGGGCTaGTGTGAGCTGGTCACCCATACATCTGGCACTTTG +
Preference number: 3 (lower is better)
Translates to: KGYFVVFSWHLG*CELVTHTSGTL
Trigger: CAAAGTGCCAGATGTATGGGTGACCAGCTCACACCAGCCCAGGTGCCAGCTGAATACCACAAAGTAACCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
3UTR CCA 72 bp GTAACAAAGGTTACTTTGTGGTATTCAGCTGGCACCTaGGCTGGTGTGAGCTGGTCACCCATACATCTGGCA +
Preference number: 3 (lower is better)
Translates to: VTKVTLWYSAGT*AGVSWSPIHLA
Trigger: TGCCAGATGTATGGGTGACCAGCTCACACCAGCCCAGGTGCCAGCTGAATACCACAAAGTAACCTTTGTTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
3UTR GCA 72 bp ATCCCAGAGAGTGTTCCCAGACAGCTGTGCCAAAGGTaGAAGTCCTCTTATGACCTAAGCTCAGAAGTCCTA +
Preference number: 3 (lower is better)
Translates to: IPESVPRQLCQR*KSSYDLSSEVL
Trigger: TAGGACTTCTGAGCTTAGGTCATAAGAGGACTTGCACCTTTGGCACAGCTGTCTGGGAACACTCTCTGGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
3UTR-3UTR CAA 90 bp TCCAGTTTCTGCCCACTGCCCAGTACCAATGTCAATGCCACATGTTTTTGTTACACCTGTGGCTTCTCTTaGTGTGTGTGTGTGTGTGTG +
Preference number: 3 (lower is better)
Translates to: SSFCPLPSTNVNATCFCYTCGFS*CVCVCV
Trigger: CACACACACACACACACACAAAGAGAAGCCACAGGT...GTAACAAAAACATGTGGCATTGACATTGGTACTGGGCAGTGGGCAGAAACTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
3UTR GCA 72 bp ATCAGTCTCTTCATGGCCCTTCCAGTTTCTGCCCACTaGCCAGTACCAATGTCAATGCCACATGTTTTTGTT +
Preference number: 3 (lower is better)
Translates to: ISLFMALPVSAH*PVPMSMPHVFV
Trigger: AACAAAAACATGTGGCATTGACATTGGTACTGGGCAGTGGGCAGAAACTGGAAGGGCCATGAAGAGACTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
3UTR-3UTR CAA 90 bp TGTGAATCTAATGTAGCCGTATCTCTCAGTATATGCAGCCAAATAAACCATTTGCAGGATCTTGCCCTGTaGTCCAGGCTGGAGTCCAGT +
Preference number: 3 (lower is better)
Translates to: CESNVAVSLSICSQINHLQDLAL*SRLESS
Trigger: ACTGGACTCCAGCCTGGACAACAGGGCAAGATCCTG...CAAATGGTTTATTTGGCTGCATATACTGAGAGATACGGCTACATTAGATTCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
3UTR-3UTR CAA 90 bp TCCAGTTTCTGCCCACTGCCCAGTACCAATGTCAATGCCACATGTTTTTGTTACGTAACAAAGGTTACTTaGTGGTATTCAGCTGGCACC +
Preference number: 3 (lower is better)
Translates to: SSFCPLPSTNVNATCFCYVTKVT*WYSAGT
Trigger: GGTGCCAGCTGAATACCACAAAGTAACCTTTGTTAC...GTAACAAAAACATGTGGCATTGACATTGGTACTGGGCAGTGGGCAGAAACTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
3UTR-3UTR CAA 90 bp TGTTCCATTGATCTATTTCTACAGCAATCACACTGTCTTGATTACTGTAGCCATGAGGGTCTTCTCTCCTaGGTTGGCTGGTTGGTTAGC +
Preference number: 3 (lower is better)
Translates to: CSIDLFLQQSHCLDYCSHEGLLS*VGWLVS
Trigger: GCTAACCAACCAGCCAACCAAGGAGAGAAGACCCTC...ATGGCTACAGTAATCAAGACAGTGTGATTGCTGTAGAAATAGATCAATGGAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
3UTR-3UTR CAA 90 bp TGTTCCATTGATCTATTTCTACAGCAATCACACTGTCTTGATTACTGTAGCCATTGTAATCCCTGCATTTaGGGAGGCCGAAGTGGGCAG +
Preference number: 3 (lower is better)
Translates to: CSIDLFLQQSHCLDYCSHCNPCI*GGRSGQ
Trigger: CTGCCCACTTCGGCCTCCCAAAATGCAGGGATTACA...ATGGCTACAGTAATCAAGACAGTGTGATTGCTGTAGAAATAGATCAATGGAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
3UTR-3UTR CAA 90 bp CATTCCCACCAGCAGTGTATTAGAGTTCCAGTTGCTTCTCATCCTCACCATCACGGCTGTTCAAATCTTTaGCCTCTTTTCTTACTGAGA +
Preference number: 3 (lower is better)
Translates to: HSHQQCIRVPVASHPHHHGCSNL*PLFLLR
Trigger: TCTCAGTAAGAAAAGAGGCAAAAGATTTGAACAGCC...GTGATGGTGAGGATGAGAAGCAACTGGAACTCTAATACACTGCTGGTGGGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
3UTR TCA 72 bp TCCCCTTATGTCTCTTCAGGCTCCATCACCATCGCCTaGCCTGTTGGTCTTCTAGAATTTTATACAGATGAA +
Preference number: 3 (lower is better)
Translates to: SPYVSSGSITIA*PVGLLEFYTDE
Trigger: TTCATCTGTATAAAATTCTAGAAGACCAACAGGTCAGGCGATGGTGATGGAGCCTGAAGAGACATAAGGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
3UTR-3UTR CAA 90 bp CATTCCCACCAGCAGTGTATTAGAGTTCCAGTTGCTTCTCATCCTCACCATCACTTCTGTATATCTTCTTaGGTGAAGTGGCTGTTCAAA +
Preference number: 3 (lower is better)
Translates to: HSHQQCIRVPVASHPHHHFCISS*VKWLFK
Trigger: TTTGAACAGCCACTTCACCAAAGAAGATATACAGAA...GTGATGGTGAGGATGAGAAGCAACTGGAACTCTAATACACTGCTGGTGGGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
3UTR-3UTR CAA 90 bp TCCAGTTTCTGCCCACTGCCCAGTACCAATGTCAATGCCACATGTTTTTGTTACACTACCCCCATTATTTaGGTAATTATAGCAGTATGG +
Preference number: 3 (lower is better)
Translates to: SSFCPLPSTNVNATCFCYTTPII*VIIAVW
Trigger: CCATACTGCTATAATTACCAAAATAATGGGGGTAGT...GTAACAAAAACATGTGGCATTGACATTGGTACTGGGCAGTGGGCAGAAACTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
3UTR-3UTR CAA 90 bp TCCAGTTTCTGCCCACTGCCCAGTACCAATGTCAATGCCACATGTTTTTGTTACTTCTGTATATCTTCTTaGGTGAAGTGGCTGTTCAAA +
Preference number: 3 (lower is better)
Translates to: SSFCPLPSTNVNATCFCYFCISS*VKWLFK
Trigger: TTTGAACAGCCACTTCACCAAAGAAGATATACAGAA...GTAACAAAAACATGTGGCATTGACATTGGTACTGGGCAGTGGGCAGAAACTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
3UTR-3UTR CAA 90 bp TGTGAATCTAATGTAGCCGTATCTCTCAGTATATGCAGCCAAATAAACCATTTGGTATTAGAGTTCCAGTaGCTTCTCATCCTCACCATC +
Preference number: 3 (lower is better)
Translates to: CESNVAVSLSICSQINHLVLEFQ*LLILTI
Trigger: GATGGTGAGGATGAGAAGCAACTGGAACTCTAATAC...CAAATGGTTTATTTGGCTGCATATACTGAGAGATACGGCTACATTAGATTCACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
3UTR-3UTR CAA 90 bp TGTGAATCTAATGTAGCCGTATCTCTCAGTATATGCAGCCAAATAAACCATTTGAATCTTGCCAACAGGTaGAATTATGCAACAAGCAGA +
Preference number: 3 (lower is better)
Translates to: CESNVAVSLSICSQINHLNLANR*NYATSR
Trigger: TCTGCTTGTTGCATAATTCAACCTGTTGGCAAGATT...CAAATGGTTTATTTGGCTGCATATACTGAGAGATACGGCTACATTAGATTCACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
3UTR-3UTR CAA 90 bp TGTGAATCTAATGTAGCCGTATCTCTCAGTATATGCAGCCAAATAAACCATTTGGGCTGTTCAAATCTTTaGCCTCTTTTCTTACTGAGA +
Preference number: 3 (lower is better)
Translates to: CESNVAVSLSICSQINHLGCSNL*PLFLLR
Trigger: TCTCAGTAAGAAAAGAGGCAAAAGATTTGAACAGCC...CAAATGGTTTATTTGGCTGCATATACTGAGAGATACGGCTACATTAGATTCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR TCA 90 bp GCCAGACTTCTTATGTGGCGGCTCAGGGATCCCAGAGAGTGTTCCCAGACAGCTGCTGGGGGTCAGTGGTaGGGCCCAAGAGCTCAAACT +
Preference number: 4 (lower is better)
Translates to: ARLLMWRLRDPRECSQTAAGGQW*GPRAQT
Trigger: AGTTTGAGCTCTTGGGCCTCACCACTGACCCCCAGC...AGCTGTCTGGGAACACTCTCTGGGATCCCTGAGCCGCCACATAAGAAGTCTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR CCA 90 bp GCCAGACTTCTTATGTGGCGGCTCAGGGATCCCAGAGAGTGTTCCCAGACAGCTACGAAGAGCAGCCTCTaGAGCTGGGGGTCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: ARLLMWRLRDPRECSQTATKSSL*SWGSVV
Trigger: CACCACTGACCCCCAGCTCCAGAGGCTGCTCTTCGT...AGCTGTCTGGGAACACTCTCTGGGATCCCTGAGCCGCCACATAAGAAGTCTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR CCA 90 bp GCCAGACTTCTTATGTGGCGGCTCAGGGATCCCAGAGAGTGTTCCCAGACAGCTAAGTTCACCAGGGTCTaGGGCACAACCGTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: ARLLMWRLRDPRECSQTAKFTRV*GTTVEE
Trigger: CTCCTCCACGGTTGTGCCCCAGACCCTGGTGAACTT...AGCTGTCTGGGAACACTCTCTGGGATCCCTGAGCCGCCACATAAGAAGTCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
3UTR CAA 72 bp GGCTGGTGTGAGCTGGTCACCCATACATCTGGCACTTaGATGGAGAAGGCTGGGCTCAGCTGGGAGCCTCAA +
Preference number: 4 (lower is better)
Translates to: GWCELVTHTSGT*MEKAGLSWEPQ
Trigger: TTGAGGCTCCCAGCTGAGCCCAGCCTTCTCCATCAAAGTGCCAGATGTATGGGTGACCAGCTCACACCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR GCA 90 bp GCCAGACTTCTTATGTGGCGGCTCAGGGATCCCAGAGAGTGTTCCCAGACAGCTGAGTACATGGGTGTGTaGAGGGTGGCACTCACATGG +
Preference number: 4 (lower is better)
Translates to: ARLLMWRLRDPRECSQTAEYMGV*RVALTW
Trigger: CCATGTGAGTGCCACCCTGCACACACCCATGTACTC...AGCTGTCTGGGAACACTCTCTGGGATCCCTGAGCCGCCACATAAGAAGTCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR GCA 90 bp GCCAGACTTCTTATGTGGCGGCTCAGGGATCCCAGAGAGTGTTCCCAGACAGCTGCAGACCAGAGGGCATaGCCAATATTCACAGGGGTG +
Preference number: 4 (lower is better)
Translates to: ARLLMWRLRDPRECSQTAADQRA*PIFTGV
Trigger: CACCCCTGTGAATATTGGGCATGCCCTCTGGTCTGC...AGCTGTCTGGGAACACTCTCTGGGATCCCTGAGCCGCCACATAAGAAGTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR CCA 90 bp GGTGGGCATGGGAATGTGCTCAGGGTGACACCACCTAAGGTAAAAGTTCCCTTGAGCTGGCACCTGGGCTaGTGTGAGCTGGTCACCCAT +
Preference number: 4 (lower is better)
Translates to: GGHGNVLRVTPPKVKVPLSWHLG*CELVTH
Trigger: ATGGGTGACCAGCTCACACCAGCCCAGGTGCCAGCT...CAAGGGAACTTTTACCTTAGGTGGTGTCACCCTGAGCACATTCCCATGCCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR TCA 90 bp GCCAGACTTCTTATGTGGCGGCTCAGGGATCCCAGAGAGTGTTCCCAGACAGCTTCACCACTGTGTAGATaGCAGCAACTGTGCGGTCCT +
Preference number: 4 (lower is better)
Translates to: ARLLMWRLRDPRECSQTASPLCR*QQLCGP
Trigger: AGGACCGCACAGTTGCTGTCATCTACACAGTGGTGA...AGCTGTCTGGGAACACTCTCTGGGATCCCTGAGCCGCCACATAAGAAGTCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR TCA 90 bp GCCAGACTTCTTATGTGGCGGCTCAGGGATCCCAGAGAGTGTTCCCAGACAGCTGCCTCCTCTAAATCCTaGGCCCAAGTGATCCTCTTG +
Preference number: 4 (lower is better)
Translates to: ARLLMWRLRDPRECSQTAASSKS*AQVILL
Trigger: CAAGAGGATCACTTGGGCTCAGGATTTAGAGGAGGC...AGCTGTCTGGGAACACTCTCTGGGATCCCTGAGCCGCCACATAAGAAGTCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR TCA 90 bp GCCAGACTTCTTATGTGGCGGCTCAGGGATCCCAGAGAGTGTTCCCAGACAGCTTTATGTTGCCCAGGCTaGAGCGCAGTGTCTATCCAC +
Preference number: 4 (lower is better)
Translates to: ARLLMWRLRDPRECSQTALCCPG*SAVSIH
Trigger: GTGGATAGACACTGCGCTTCAGCCTGGGCAACATAA...AGCTGTCTGGGAACACTCTCTGGGATCCCTGAGCCGCCACATAAGAAGTCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR GCA 90 bp GGTGGGCATGGGAATGTGCTCAGGGTGACACCACCTAAGGTAAAAGTTCCCTTGATGTTCATGCCACTGTaGTCCAGCCTCGGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: GGHGNVLRVTPPKVKVPLMFMPL*SSLGGG
Trigger: TCCACCCCCGAGGCTGGAGCACAGTGGCATGAACAT...CAAGGGAACTTTTACCTTAGGTGGTGTCACCCTGAGCACATTCCCATGCCCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR CCA 90 bp GCCAGACTTCTTATGTGGCGGCTCAGGGATCCCAGAGAGTGTTCCCAGACAGCTAGGGTGGCACTCACATaGATCAGGAGGAACATGACC +
Preference number: 4 (lower is better)
Translates to: ARLLMWRLRDPRECSQTARVALT*IRRNMT
Trigger: GGTCATGTTCCTCCTGATCCATGTGAGTGCCACCCT...AGCTGTCTGGGAACACTCTCTGGGATCCCTGAGCCGCCACATAAGAAGTCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR GCA 90 bp GCCAGACTTCTTATGTGGCGGCTCAGGGATCCCAGAGAGTGTTCCCAGACAGCTTGTGGGTCAGGAGGCTaGAAGGTGTCCTTAAGATTC +
Preference number: 4 (lower is better)
Translates to: ARLLMWRLRDPRECSQTACGSGG*KVSLRF
Trigger: GAATCTTAAGGACACCTTGCAGCCTCCTGACCCACA...AGCTGTCTGGGAACACTCTCTGGGATCCCTGAGCCGCCACATAAGAAGTCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR CCA 90 bp GGTGGGCATGGGAATGTGCTCAGGGTGACACCACCTAAGGTAAAAGTTCCCTTGTGGGTGTGTGCAGGGTaGCACTCACATGGATCAGGA +
Preference number: 4 (lower is better)
Translates to: GGHGNVLRVTPPKVKVPLWVCAG*HSHGSG
Trigger: TCCTGATCCATGTGAGTGCCACCCTGCACACACCCA...CAAGGGAACTTTTACCTTAGGTGGTGTCACCCTGAGCACATTCCCATGCCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR CCA 90 bp GGTGGGCATGGGAATGTGCTCAGGGTGACACCACCTAAGGTAAAAGTTCCCTTGTTTGATGGAGAAGGCTaGGCTCAGCTGGGAGCCTCA +
Preference number: 4 (lower is better)
Translates to: GGHGNVLRVTPPKVKVPLFDGEG*AQLGAS
Trigger: TGAGGCTCCCAGCTGAGCCCAGCCTTCTCCATCAAA...CAAGGGAACTTTTACCTTAGGTGGTGTCACCCTGAGCACATTCCCATGCCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR CCA 90 bp GCCAGACTTCTTATGTGGCGGCTCAGGGATCCCAGAGAGTGTTCCCAGACAGCTCTATCAGTCTCTTCATaGCCCTTCCAGTTTCTGCCC +
Preference number: 4 (lower is better)
Translates to: ARLLMWRLRDPRECSQTALSVSS*PFQFLP
Trigger: GGGCAGAAACTGGAAGGGCCATGAAGAGACTGATAG...AGCTGTCTGGGAACACTCTCTGGGATCCCTGAGCCGCCACATAAGAAGTCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR TCA 90 bp GGTGGGCATGGGAATGTGCTCAGGGTGACACCACCTAAGGTAAAAGTTCCCTTGCACAGAAGAAGTGAGTaGCGACATGAGCACCGCAGA +
Preference number: 4 (lower is better)
Translates to: GGHGNVLRVTPPKVKVPLHRRSE*RHEHRR
Trigger: TCTGCGGTGCTCATGTCGTCACTCACTTCTTCTGTG...CAAGGGAACTTTTACCTTAGGTGGTGTCACCCTGAGCACATTCCCATGCCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR TCA 90 bp GGTGGGCATGGGAATGTGCTCAGGGTGACACCACCTAAGGTAAAAGTTCCCTTGTCACCACTGTGTAGATaGCAGCAACTGTGCGGTCCT +
Preference number: 4 (lower is better)
Translates to: GGHGNVLRVTPPKVKVPLSPLCR*QQLCGP
Trigger: AGGACCGCACAGTTGCTGTCATCTACACAGTGGTGA...CAAGGGAACTTTTACCTTAGGTGGTGTCACCCTGAGCACATTCCCATGCCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR TCA 90 bp GCCAGACTTCTTATGTGGCGGCTCAGGGATCCCAGAGAGTGTTCCCAGACAGCTGAAAAAGAAGAAGAATaGCAGGCCAGCATGGTGGCT +
Preference number: 4 (lower is better)
Translates to: ARLLMWRLRDPRECSQTAEKEEE*QASMVA
Trigger: AGCCACCATGCTGGCCTGTCATTCTTCTTCTTTTTC...AGCTGTCTGGGAACACTCTCTGGGATCCCTGAGCCGCCACATAAGAAGTCTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR TCA 90 bp GCCAGACTTCTTATGTGGCGGCTCAGGGATCCCAGAGAGTGTTCCCAGACAGCTGTGCAAGTCCTCTTATaGCCTAAGCTCAGAAGTCCT +
Preference number: 4 (lower is better)
Translates to: ARLLMWRLRDPRECSQTAVQVLL*PKLRSP
Trigger: AGGACTTCTGAGCTTAGGTCATAAGAGGACTTGCAC...AGCTGTCTGGGAACACTCTCTGGGATCCCTGAGCCGCCACATAAGAAGTCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR GCA 90 bp GCCAGACTTCTTATGTGGCGGCTCAGGGATCCCAGAGAGTGTTCCCAGACAGCTGAAGCTTGTTACATGTaGAGATTCCAGGTCCCAACC +
Preference number: 4 (lower is better)
Translates to: ARLLMWRLRDPRECSQTAEACYM*RFQVPT
Trigger: GGTTGGGACCTGGAATCTGCACATGTAACAAGCTTC...AGCTGTCTGGGAACACTCTCTGGGATCCCTGAGCCGCCACATAAGAAGTCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641039.1
CDS-3UTR TCA 90 bp CATTCCCACCAGCAGTGTATTAGAGTTCCAGTTGCTTCTCATCCTCACCATCACAGGCCATGGCAGCGATaGGATAGCACTCACTGGTGG +
Preference number: 4 (lower is better)
Translates to: HSHQQCIRVPVASHPHHHRPWQR*DSTHWW
Trigger: CCACCAGTGAGTGCTATCTCATCGCTGCCATGGCCT...GTGATGGTGAGGATGAGAAGCAACTGGAACTCTAATACACTGCTGGTGGGAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR TCA 90 bp GGTGGGCATGGGAATGTGCTCAGGGTGACACCACCTAAGGTAAAAGTTCCCTTGAGGAGATCAAGATGGTaGGGGTGCAGCTCAAAAGGT +
Preference number: 4 (lower is better)
Translates to: GGHGNVLRVTPPKVKVPLRRSRW*GCSSKG
Trigger: ACCTTTTGAGCTGCACCCTCACCATCTTGATCTCCT...CAAGGGAACTTTTACCTTAGGTGGTGTCACCCTGAGCACATTCCCATGCCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR TCA 90 bp GCCAGACTTCTTATGTGGCGGCTCAGGGATCCCAGAGAGTGTTCCCAGACAGCTGCAAACAGATCTTCCTaGGCCACATATACGTATCTC +
Preference number: 4 (lower is better)
Translates to: ARLLMWRLRDPRECSQTAANRSS*ATYTYL
Trigger: GAGATACGTATATGTGGCTCAGGAAGATCTGTTTGC...AGCTGTCTGGGAACACTCTCTGGGATCCCTGAGCCGCCACATAAGAAGTCTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641039.1
CDS-3UTR GCA 90 bp GGTGGGCATGGGAATGTGCTCAGGGTGACACCACCTAAGGTAAAAGTTCCCTTGAATGAGCAATGTTCATaGCACTGTGCTCCAGCCTCG +
Preference number: 4 (lower is better)
Translates to: GGHGNVLRVTPPKVKVPLNEQCS*HCAPAS
Trigger: CGAGGCTGGAGCACAGTGGCATGAACATTGCTCATT...CAAGGGAACTTTTACCTTAGGTGGTGTCACCCTGAGCACATTCCCATGCCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR GCA 90 bp GCCAGACTTCTTATGTGGCGGCTCAGGGATCCCAGAGAGTGTTCCCAGACAGCTAGAAATGTCCCATTTTaGAGGTTTGTCACGCTGCCT +
Preference number: 4 (lower is better)
Translates to: ARLLMWRLRDPRECSQTARNVPF*RFVTLP
Trigger: AGGCAGCGTGACAAACCTGCAAAATGGGACATTTCT...AGCTGTCTGGGAACACTCTCTGGGATCCCTGAGCCGCCACATAAGAAGTCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR CCA 90 bp GGTGGGCATGGGAATGTGCTCAGGGTGACACCACCTAAGGTAAAAGTTCCCTTGCAATATTCACAGGGGTaGGCATGGGAATGTGCTCAG +
Preference number: 4 (lower is better)
Translates to: GGHGNVLRVTPPKVKVPLQYSQG*AWECAQ
Trigger: CTGAGCACATTCCCATGCCCACCCCTGTGAATATTG...CAAGGGAACTTTTACCTTAGGTGGTGTCACCCTGAGCACATTCCCATGCCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR CCA 90 bp GGTGGGCATGGGAATGTGCTCAGGGTGACACCACCTAAGGTAAAAGTTCCCTTGAGGGTCTTCTCTCCTTaGTTGGCTGGTTGGTTAGCT +
Preference number: 4 (lower is better)
Translates to: GGHGNVLRVTPPKVKVPLRVFSP*LAGWLA
Trigger: AGCTAACCAACCAGCCAACCAAGGAGAGAAGACCCT...CAAGGGAACTTTTACCTTAGGTGGTGTCACCCTGAGCACATTCCCATGCCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR CCA 90 bp CATTCCCACCAGCAGTGTATTAGAGTTCCAGTTGCTTCTCATCCTCACCATCACCAGGCTGGAGTCCAGTaGCACAATCACGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: HSHQQCIRVPVASHPHHHQAGVQ*HNHGSL
Trigger: CAGTGAGCCGTGATTGTGCCACTGGACTCCAGCCTG...GTGATGGTGAGGATGAGAAGCAACTGGAACTCTAATACACTGCTGGTGGGAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR CCA 90 bp GCCAGACTTCTTATGTGGCGGCTCAGGGATCCCAGAGAGTGTTCCCAGACAGCTACAAAGGTTACTTTGTaGTATTCAGCTGGCACCTGG +
Preference number: 4 (lower is better)
Translates to: ARLLMWRLRDPRECSQTATKVTL*YSAGTW
Trigger: CCAGGTGCCAGCTGAATACCACAAAGTAACCTTTGT...AGCTGTCTGGGAACACTCTCTGGGATCCCTGAGCCGCCACATAAGAAGTCTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR TCA 90 bp TCCAGTTTCTGCCCACTGCCCAGTACCAATGTCAATGCCACATGTTTTTGTTACGGATCAGGAGGAACATaGCCAGGTTCCCCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: SSFCPLPSTNVNATCFCYGSGGT*PGSPAE
Trigger: CTCTGCTGGGGAACCTGGTCATGTTCCTCCTGATCC...GTAACAAAAACATGTGGCATTGACATTGGTACTGGGCAGTGGGCAGAAACTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR TCA 90 bp TCCAGTTTCTGCCCACTGCCCAGTACCAATGTCAATGCCACATGTTTTTGTTACAGGCCATGGCAGCGATaGGATAGCACTCACTGGTGG +
Preference number: 4 (lower is better)
Translates to: SSFCPLPSTNVNATCFCYRPWQR*DSTHWW
Trigger: CCACCAGTGAGTGCTATCTCATCGCTGCCATGGCCT...GTAACAAAAACATGTGGCATTGACATTGGTACTGGGCAGTGGGCAGAAACTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR TCA 90 bp GGTGGGCATGGGAATGTGCTCAGGGTGACACCACCTAAGGTAAAAGTTCCCTTGGAAAAAGAAGAAGAATaGCAGGCCAGCATGGTGGCT +
Preference number: 4 (lower is better)
Translates to: GGHGNVLRVTPPKVKVPLEKEEE*QASMVA
Trigger: AGCCACCATGCTGGCCTGTCATTCTTCTTCTTTTTC...CAAGGGAACTTTTACCTTAGGTGGTGTCACCCTGAGCACATTCCCATGCCCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR CCA 90 bp CATTCCCACCAGCAGTGTATTAGAGTTCCAGTTGCTTCTCATCCTCACCATCACGCCTTAAACCTGCCCTaGGCCGAGCTCATTTTCAGG +
Preference number: 4 (lower is better)
Translates to: HSHQQCIRVPVASHPHHHALNLP*AELIFR
Trigger: CCTGAAAATGAGCTCGGCCCAGGGCAGGTTTAAGGC...GTGATGGTGAGGATGAGAAGCAACTGGAACTCTAATACACTGCTGGTGGGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR CCA 90 bp TCCAGTTTCTGCCCACTGCCCAGTACCAATGTCAATGCCACATGTTTTTGTTACTCACAGGGGTGGGCATaGGAATGTGCTCAGGGTGAC +
Preference number: 4 (lower is better)
Translates to: SSFCPLPSTNVNATCFCYSQGWA*ECAQGD
Trigger: GTCACCCTGAGCACATTCCCATGCCCACCCCTGTGA...GTAACAAAAACATGTGGCATTGACATTGGTACTGGGCAGTGGGCAGAAACTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR CCA 90 bp GCCAGACTTCTTATGTGGCGGCTCAGGGATCCCAGAGAGTGTTCCCAGACAGCTTTGTACTGGGACAACTaGATAGCCACATGCAAAAGA +
Preference number: 4 (lower is better)
Translates to: ARLLMWRLRDPRECSQTALYWDN*IATCKR
Trigger: TCTTTTGCATGTGGCTATCCAGTTGTCCCAGTACAA...AGCTGTCTGGGAACACTCTCTGGGATCCCTGAGCCGCCACATAAGAAGTCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR CCA 90 bp GCCAGACTTCTTATGTGGCGGCTCAGGGATCCCAGAGAGTGTTCCCAGACAGCTGTAATCAAGACAGTGTaGTTCTGGGGTAAGGATACA +
Preference number: 4 (lower is better)
Translates to: ARLLMWRLRDPRECSQTAVIKTV*FWGKDT
Trigger: TGTATCCTTACCCCAGAACCACACTGTCTTGATTAC...AGCTGTCTGGGAACACTCTCTGGGATCCCTGAGCCGCCACATAAGAAGTCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR TCA 90 bp CATTCCCACCAGCAGTGTATTAGAGTTCCAGTTGCTTCTCATCCTCACCATCACAGACCTCAGGAGACATaGTGGTTGAGTAGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: HSHQQCIRVPVASHPHHHRPQET*WLSRAG
Trigger: CCCTGCTCTACTCAACCATCATGTCTCCTGAGGTCT...GTGATGGTGAGGATGAGAAGCAACTGGAACTCTAATACACTGCTGGTGGGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR TCA 90 bp CATTCCCACCAGCAGTGTATTAGAGTTCCAGTTGCTTCTCATCCTCACCATCACTTATGTTGCCCAGGCTaGAGCGCAGTGTCTATCCAC +
Preference number: 4 (lower is better)
Translates to: HSHQQCIRVPVASHPHHHLCCPG*SAVSIH
Trigger: GTGGATAGACACTGCGCTTCAGCCTGGGCAACATAA...GTGATGGTGAGGATGAGAAGCAACTGGAACTCTAATACACTGCTGGTGGGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR GCA 90 bp TCCAGTTTCTGCCCACTGCCCAGTACCAATGTCAATGCCACATGTTTTTGTTACGAGTACATGGGTGTGTaGAGGGTGGCACTCACATGG +
Preference number: 4 (lower is better)
Translates to: SSFCPLPSTNVNATCFCYEYMGV*RVALTW
Trigger: CCATGTGAGTGCCACCCTGCACACACCCATGTACTC...GTAACAAAAACATGTGGCATTGACATTGGTACTGGGCAGTGGGCAGAAACTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR GCA 90 bp CATTCCCACCAGCAGTGTATTAGAGTTCCAGTTGCTTCTCATCCTCACCATCACTTCATCCTTCTCCAGTaGTCCGACTCATTGCCCCCA +
Preference number: 4 (lower is better)
Translates to: HSHQQCIRVPVASHPHHHFILLQ*SDSLPP
Trigger: TGGGGGCAATGAGTCGGAGCACTGGAGAAGGATGAA...GTGATGGTGAGGATGAGAAGCAACTGGAACTCTAATACACTGCTGGTGGGAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641039.1
CDS-3UTR GCA 90 bp GGTGGGCATGGGAATGTGCTCAGGGTGACACCACCTAAGGTAAAAGTTCCCTTGAGAAATGTCCCATTTTaGAGGTTTGTCACGCTGCCT +
Preference number: 4 (lower is better)
Translates to: GGHGNVLRVTPPKVKVPLRNVPF*RFVTLP
Trigger: AGGCAGCGTGACAAACCTGCAAAATGGGACATTTCT...CAAGGGAACTTTTACCTTAGGTGGTGTCACCCTGAGCACATTCCCATGCCCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR CCA 90 bp GGTGGGCATGGGAATGTGCTCAGGGTGACACCACCTAAGGTAAAAGTTCCCTTGACAAAGGTTACTTTGTaGTATTCAGCTGGCACCTGG +
Preference number: 4 (lower is better)
Translates to: GGHGNVLRVTPPKVKVPLTKVTL*YSAGTW
Trigger: CCAGGTGCCAGCTGAATACCACAAAGTAACCTTTGT...CAAGGGAACTTTTACCTTAGGTGGTGTCACCCTGAGCACATTCCCATGCCCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR TCA 90 bp TCCAGTTTCTGCCCACTGCCCAGTACCAATGTCAATGCCACATGTTTTTGTTACAGACCTCAGGAGACATaGTGGTTGAGTAGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: SSFCPLPSTNVNATCFCYRPQET*WLSRAG
Trigger: CCCTGCTCTACTCAACCATCATGTCTCCTGAGGTCT...GTAACAAAAACATGTGGCATTGACATTGGTACTGGGCAGTGGGCAGAAACTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR TCA 90 bp GGTGGGCATGGGAATGTGCTCAGGGTGACACCACCTAAGGTAAAAGTTCCCTTGATCTTGCCAACAGGTTaGATTATGCAACAAGCAGAC +
Preference number: 4 (lower is better)
Translates to: GGHGNVLRVTPPKVKVPLILPTG*IMQQAD
Trigger: GTCTGCTTGTTGCATAATTCAACCTGTTGGCAAGAT...CAAGGGAACTTTTACCTTAGGTGGTGTCACCCTGAGCACATTCCCATGCCCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR TCA 90 bp GCCAGACTTCTTATGTGGCGGCTCAGGGATCCCAGAGAGTGTTCCCAGACAGCTACTGGGAAAAATGAATaGAGCATCTCAACATGGATT +
Preference number: 4 (lower is better)
Translates to: ARLLMWRLRDPRECSQTATGKNE*SISTWI
Trigger: AATCCATGTTGAGATGCTTCATTCATTTTTCCCAGT...AGCTGTCTGGGAACACTCTCTGGGATCCCTGAGCCGCCACATAAGAAGTCTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR TCA 90 bp TCCAGTTTCTGCCCACTGCCCAGTACCAATGTCAATGCCACATGTTTTTGTTACGGCTGGTTGGTTAGCTaGCAAGCATTACCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: SSFCPLPSTNVNATCFCYGWLVS*QALPEQ
Trigger: CTGCTCAGGTAATGCTTGTCAGCTAACCAACCAGCC...GTAACAAAAACATGTGGCATTGACATTGGTACTGGGCAGTGGGCAGAAACTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR TCA 90 bp GCCAGACTTCTTATGTGGCGGCTCAGGGATCCCAGAGAGTGTTCCCAGACAGCTGAACATTTTGCCATCTaGATAAGATGGGAAAGAGAA +
Preference number: 4 (lower is better)
Translates to: ARLLMWRLRDPRECSQTAEHFAI*IRWERE
Trigger: TTCTCTTTCCCATCTTATTCAGATGGCAAAATGTTC...AGCTGTCTGGGAACACTCTCTGGGATCCCTGAGCCGCCACATAAGAAGTCTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR GCA 90 bp CATTCCCACCAGCAGTGTATTAGAGTTCCAGTTGCTTCTCATCCTCACCATCACCATGCCTGTAATCCCTaGATTTTGGGAGGCCGAAGT +
Preference number: 4 (lower is better)
Translates to: HSHQQCIRVPVASHPHHHHACNP*ILGGRS
Trigger: ACTTCGGCCTCCCAAAATGCAGGGATTACAGGCATG...GTGATGGTGAGGATGAGAAGCAACTGGAACTCTAATACACTGCTGGTGGGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR GCA 90 bp CATTCCCACCAGCAGTGTATTAGAGTTCCAGTTGCTTCTCATCCTCACCATCACTGTGGGTCAGGAGGCTaGAAGGTGTCCTTAAGATTC +
Preference number: 4 (lower is better)
Translates to: HSHQQCIRVPVASHPHHHCGSGG*KVSLRF
Trigger: GAATCTTAAGGACACCTTGCAGCCTCCTGACCCACA...GTGATGGTGAGGATGAGAAGCAACTGGAACTCTAATACACTGCTGGTGGGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR CCA 90 bp CATTCCCACCAGCAGTGTATTAGAGTTCCAGTTGCTTCTCATCCTCACCATCACTCAAACTCCATCCCTTaGCTCAGGTTTGCCCCTTTC +
Preference number: 4 (lower is better)
Translates to: HSHQQCIRVPVASHPHHHSNSIP*LRFAPF
Trigger: GAAAGGGGCAAACCTGAGCCAAGGGATGGAGTTTGA...GTGATGGTGAGGATGAGAAGCAACTGGAACTCTAATACACTGCTGGTGGGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR CCA 90 bp TGTTCCATTGATCTATTTCTACAGCAATCACACTGTCTTGATTACTGTAGCCATAGCAGCCTCTGGAGCTaGGGGTCAGTGGTGAGGCCC +
Preference number: 4 (lower is better)
Translates to: CSIDLFLQQSHCLDYCSHSSLWS*GSVVRP
Trigger: GGGCCTCACCACTGACCCCCAGCTCCAGAGGCTGCT...ATGGCTACAGTAATCAAGACAGTGTGATTGCTGTAGAAATAGATCAATGGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR CCA 90 bp TGTGAATCTAATGTAGCCGTATCTCTCAGTATATGCAGCCAAATAAACCATTTGAGCAGCCTCTGGAGCTaGGGGTCAGTGGTGAGGCCC +
Preference number: 4 (lower is better)
Translates to: CESNVAVSLSICSQINHLSSLWS*GSVVRP
Trigger: GGGCCTCACCACTGACCCCCAGCTCCAGAGGCTGCT...CAAATGGTTTATTTGGCTGCATATACTGAGAGATACGGCTACATTAGATTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR CCA 90 bp CATTCCCACCAGCAGTGTATTAGAGTTCCAGTTGCTTCTCATCCTCACCATCACGGTCACCCATACATCTaGCACTTTGATGGAGAAGGC +
Preference number: 4 (lower is better)
Translates to: HSHQQCIRVPVASHPHHHGHPYI*HFDGEG
Trigger: GCCTTCTCCATCAAAGTGCCAGATGTATGGGTGACC...GTGATGGTGAGGATGAGAAGCAACTGGAACTCTAATACACTGCTGGTGGGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR TCA 90 bp CATTCCCACCAGCAGTGTATTAGAGTTCCAGTTGCTTCTCATCCTCACCATCACCAGGATCTCACACAGTaGGGTGTCTACACAAGACAA +
Preference number: 4 (lower is better)
Translates to: HSHQQCIRVPVASHPHHHQDLTQ*GVYTRQ
Trigger: TTGTCTTGTGTAGACACCTCACTGTGTGAGATCCTG...GTGATGGTGAGGATGAGAAGCAACTGGAACTCTAATACACTGCTGGTGGGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR TCA 90 bp GGTGGGCATGGGAATGTGCTCAGGGTGACACCACCTAAGGTAAAAGTTCCCTTGTCCTATGCCATTTGTTaGAAAGACTGTTCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: GGHGNVLRVTPPKVKVPLSYAIC*KDCSFP
Trigger: AGGGAAAGAACAGTCTTTTCAACAAATGGCATAGGA...CAAGGGAACTTTTACCTTAGGTGGTGTCACCCTGAGCACATTCCCATGCCCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR GCA 90 bp TCCAGTTTCTGCCCACTGCCCAGTACCAATGTCAATGCCACATGTTTTTGTTACAATGAGCAATGTTCATaGCACTGTGCTCCAGCCTCG +
Preference number: 4 (lower is better)
Translates to: SSFCPLPSTNVNATCFCYNEQCS*HCAPAS
Trigger: CGAGGCTGGAGCACAGTGGCATGAACATTGCTCATT...GTAACAAAAACATGTGGCATTGACATTGGTACTGGGCAGTGGGCAGAAACTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR GCA 90 bp TCCAGTTTCTGCCCACTGCCCAGTACCAATGTCAATGCCACATGTTTTTGTTACCATGCCTGTAATCCCTaGATTTTGGGAGGCCGAAGT +
Preference number: 4 (lower is better)
Translates to: SSFCPLPSTNVNATCFCYHACNP*ILGGRS
Trigger: ACTTCGGCCTCCCAAAATGCAGGGATTACAGGCATG...GTAACAAAAACATGTGGCATTGACATTGGTACTGGGCAGTGGGCAGAAACTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR GCA 90 bp GCCAGACTTCTTATGTGGCGGCTCAGGGATCCCAGAGAGTGTTCCCAGACAGCTGTATCTCTCAGTATATaGAGCCAAATAAACCATTTG +
Preference number: 4 (lower is better)
Translates to: ARLLMWRLRDPRECSQTAVSLSI*SQINHL
Trigger: CAAATGGTTTATTTGGCTGCATATACTGAGAGATAC...AGCTGTCTGGGAACACTCTCTGGGATCCCTGAGCCGCCACATAAGAAGTCTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR GCA 90 bp GCCAGACTTCTTATGTGGCGGCTCAGGGATCCCAGAGAGTGTTCCCAGACAGCTAACTGGATAGCCACATaGAAAAGAATGAAGTTTTTC +
Preference number: 4 (lower is better)
Translates to: ARLLMWRLRDPRECSQTANWIAT*KRMKFF
Trigger: GAAAAACTTCATTCTTTTGCATGTGGCTATCCAGTT...AGCTGTCTGGGAACACTCTCTGGGATCCCTGAGCCGCCACATAAGAAGTCTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR CCA 90 bp CATTCCCACCAGCAGTGTATTAGAGTTCCAGTTGCTTCTCATCCTCACCATCACGATAGCACTCACTGGTaGCAAAACCCGCATAGAAGA +
Preference number: 4 (lower is better)
Translates to: HSHQQCIRVPVASHPHHHDSTHW*QNPHRR
Trigger: TCTTCTATGCGGGTTTTGCCACCAGTGAGTGCTATC...GTGATGGTGAGGATGAGAAGCAACTGGAACTCTAATACACTGCTGGTGGGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR CCA 90 bp TCCAGTTTCTGCCCACTGCCCAGTACCAATGTCAATGCCACATGTTTTTGTTACCAATATTCACAGGGGTaGGCATGGGAATGTGCTCAG +
Preference number: 4 (lower is better)
Translates to: SSFCPLPSTNVNATCFCYQYSQG*AWECAQ
Trigger: CTGAGCACATTCCCATGCCCACCCCTGTGAATATTG...GTAACAAAAACATGTGGCATTGACATTGGTACTGGGCAGTGGGCAGAAACTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR CCA 90 bp GGTGGGCATGGGAATGTGCTCAGGGTGACACCACCTAAGGTAAAAGTTCCCTTGTCTTCTTTGGTGAAGTaGCTGTTCAAATCTTTTGCC +
Preference number: 4 (lower is better)
Translates to: GGHGNVLRVTPPKVKVPLSSLVK*LFKSFA
Trigger: GGCAAAAGATTTGAACAGCCACTTCACCAAAGAAGA...CAAGGGAACTTTTACCTTAGGTGGTGTCACCCTGAGCACATTCCCATGCCCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR CCA 90 bp TCCAGTTTCTGCCCACTGCCCAGTACCAATGTCAATGCCACATGTTTTTGTTACGGTCACCCATACATCTaGCACTTTGATGGAGAAGGC +
Preference number: 4 (lower is better)
Translates to: SSFCPLPSTNVNATCFCYGHPYI*HFDGEG
Trigger: GCCTTCTCCATCAAAGTGCCAGATGTATGGGTGACC...GTAACAAAAACATGTGGCATTGACATTGGTACTGGGCAGTGGGCAGAAACTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR TCA 90 bp TGTTCCATTGATCTATTTCTACAGCAATCACACTGTCTTGATTACTGTAGCCATGCACCTGGGCTGGTGTaGGCTGGTCACCCATACATC +
Preference number: 4 (lower is better)
Translates to: CSIDLFLQQSHCLDYCSHAPGLV*AGHPYI
Trigger: GATGTATGGGTGACCAGCTCACACCAGCCCAGGTGC...ATGGCTACAGTAATCAAGACAGTGTGATTGCTGTAGAAATAGATCAATGGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR GCA 90 bp GGTGGGCATGGGAATGTGCTCAGGGTGACACCACCTAAGGTAAAAGTTCCCTTGATCCTCACCATCACTTaGTATAGTCAATCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: GGHGNVLRVTPPKVKVPLILTIT*YSQSCS
Trigger: TGAACAAGATTGACTATAGCAAGTGATGGTGAGGAT...CAAGGGAACTTTTACCTTAGGTGGTGTCACCCTGAGCACATTCCCATGCCCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR CCA 90 bp GGTGGGCATGGGAATGTGCTCAGGGTGACACCACCTAAGGTAAAAGTTCCCTTGAAGATACAGCCAGTGTaGATAAGAGAATTGAGGAAT +
Preference number: 4 (lower is better)
Translates to: GGHGNVLRVTPPKVKVPLKIQPV*IRELRN
Trigger: ATTCCTCAATTCTCTTATCCACACTGGCTGTATCTT...CAAGGGAACTTTTACCTTAGGTGGTGTCACCCTGAGCACATTCCCATGCCCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR CCA 90 bp TGTTCCATTGATCTATTTCTACAGCAATCACACTGTCTTGATTACTGTAGCCATGGGTCAAGGAGTAGCTaGACCTGGGGCGCAGGTACA +
Preference number: 4 (lower is better)
Translates to: CSIDLFLQQSHCLDYCSHGSRSS*TWGAGT
Trigger: TGTACCTGCGCCCCAGGTCCAGCTACTCCTTGACCC...ATGGCTACAGTAATCAAGACAGTGTGATTGCTGTAGAAATAGATCAATGGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR TCA 90 bp TGTTCCATTGATCTATTTCTACAGCAATCACACTGTCTTGATTACTGTAGCCATGGATCAGGAGGAACATaGCCAGGTTCCCCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: CSIDLFLQQSHCLDYCSHGSGGT*PGSPAE
Trigger: CTCTGCTGGGGAACCTGGTCATGTTCCTCCTGATCC...ATGGCTACAGTAATCAAGACAGTGTGATTGCTGTAGAAATAGATCAATGGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR GCA 90 bp TCCAGTTTCTGCCCACTGCCCAGTACCAATGTCAATGCCACATGTTTTTGTTACAGAATTGAGGAATCCTaGACTGTAGGAGCCCACAAT +
Preference number: 4 (lower is better)
Translates to: SSFCPLPSTNVNATCFCYRIEES*TVGAHN
Trigger: ATTGTGGGCTCCTACAGTGCAGGATTCCTCAATTCT...GTAACAAAAACATGTGGCATTGACATTGGTACTGGGCAGTGGGCAGAAACTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR GCA 90 bp TGTGAATCTAATGTAGCCGTATCTCTCAGTATATGCAGCCAAATAAACCATTTGAGTGCTCCGACTCATTaGCCCCATCCCTGGGATAGC +
Preference number: 4 (lower is better)
Translates to: CESNVAVSLSICSQINHLSAPTH*PHPWDS
Trigger: GCTATCCCAGGGATGGGGGCAATGAGTCGGAGCACT...CAAATGGTTTATTTGGCTGCATATACTGAGAGATACGGCTACATTAGATTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641039.1
CDS-3UTR GCA 90 bp GGTGGGCATGGGAATGTGCTCAGGGTGACACCACCTAAGGTAAAAGTTCCCTTGCAGTACCAATGTCAATaGCACATGTTTTTGTTACAA +
Preference number: 4 (lower is better)
Translates to: GGHGNVLRVTPPKVKVPLQYQCQ*HMFLLQ
Trigger: TTGTAACAAAAACATGTGGCATTGACATTGGTACTG...CAAGGGAACTTTTACCTTAGGTGGTGTCACCCTGAGCACATTCCCATGCCCACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR GCA 90 bp CATTCCCACCAGCAGTGTATTAGAGTTCCAGTTGCTTCTCATCCTCACCATCACGCGTCACCTACCTTTTaGACTAGAAATGTCCCATTT +
Preference number: 4 (lower is better)
Translates to: HSHQQCIRVPVASHPHHHASPTF*TRNVPF
Trigger: AAATGGGACATTTCTAGTGCAAAAGGTAGGTGACGC...GTGATGGTGAGGATGAGAAGCAACTGGAACTCTAATACACTGCTGGTGGGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR CCA 90 bp CATTCCCACCAGCAGTGTATTAGAGTTCCAGTTGCTTCTCATCCTCACCATCACAGAAACACTAAACCATaGGGTACTTGCAGGAGCAAA +
Preference number: 4 (lower is better)
Translates to: HSHQQCIRVPVASHPHHHRNTKP*GTCRSK
Trigger: TTTGCTCCTGCAAGTACCCCATGGTTTAGTGTTTCT...GTGATGGTGAGGATGAGAAGCAACTGGAACTCTAATACACTGCTGGTGGGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641039.1
CDS-3UTR CCA 90 bp TGTTCCATTGATCTATTTCTACAGCAATCACACTGTCTTGATTACTGTAGCCATCAGGCTGGAGTCCAGTaGCACAATCACGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: CSIDLFLQQSHCLDYCSHQAGVQ*HNHGSL
Trigger: CAGTGAGCCGTGATTGTGCCACTGGACTCCAGCCTG...ATGGCTACAGTAATCAAGACAGTGTGATTGCTGTAGAAATAGATCAATGGAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR CCA 90 bp TCAACATGGATTACTAAATCTTGCCAACAGGTTGAATTATGCAACAAGCAGACAAAGGCTGGGCTCAGCTaGGAGCCTCAACTGGAGTGT +
Preference number: 4 (lower is better)
Translates to: STWITKSCQQVELCNKQTKAGLS*EPQLEC
Trigger: ACACTCCAGTTGAGGCTCCCAGCTGAGCCCAGCCTT...TGTCTGCTTGTTGCATAATTCAACCTGTTGGCAAGATTTAGTAATCCATGTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR CCA 90 bp TGTTCCATTGATCTATTTCTACAGCAATCACACTGTCTTGATTACTGTAGCCATAAGGCTGGGCTCAGCTaGGAGCCTCAACTGGAGTGT +
Preference number: 4 (lower is better)
Translates to: CSIDLFLQQSHCLDYCSHKAGLS*EPQLEC
Trigger: ACACTCCAGTTGAGGCTCCCAGCTGAGCCCAGCCTT...ATGGCTACAGTAATCAAGACAGTGTGATTGCTGTAGAAATAGATCAATGGAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR CCA 90 bp CATTCCCACCAGCAGTGTATTAGAGTTCCAGTTGCTTCTCATCCTCACCATCACGTAATCAAGACAGTGTaGTTCTGGGGTAAGGATACA +
Preference number: 4 (lower is better)
Translates to: HSHQQCIRVPVASHPHHHVIKTV*FWGKDT
Trigger: TGTATCCTTACCCCAGAACCACACTGTCTTGATTAC...GTGATGGTGAGGATGAGAAGCAACTGGAACTCTAATACACTGCTGGTGGGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR TCA 90 bp TCCAGTTTCTGCCCACTGCCCAGTACCAATGTCAATGCCACATGTTTTTGTTACATCTTGCCAACAGGTTaGATTATGCAACAAGCAGAC +
Preference number: 4 (lower is better)
Translates to: SSFCPLPSTNVNATCFCYILPTG*IMQQAD
Trigger: GTCTGCTTGTTGCATAATTCAACCTGTTGGCAAGAT...GTAACAAAAACATGTGGCATTGACATTGGTACTGGGCAGTGGGCAGAAACTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR GCA 90 bp TGTGAATCTAATGTAGCCGTATCTCTCAGTATATGCAGCCAAATAAACCATTTGGCAGACCAGAGGGCATaGCCAATATTCACAGGGGTG +
Preference number: 4 (lower is better)
Translates to: CESNVAVSLSICSQINHLADQRA*PIFTGV
Trigger: CACCCCTGTGAATATTGGGCATGCCCTCTGGTCTGC...CAAATGGTTTATTTGGCTGCATATACTGAGAGATACGGCTACATTAGATTCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR CCA 90 bp TGTTCCATTGATCTATTTCTACAGCAATCACACTGTCTTGATTACTGTAGCCATTGGGTGTGTGCAGGGTaGCACTCACATGGATCAGGA +
Preference number: 4 (lower is better)
Translates to: CSIDLFLQQSHCLDYCSHWVCAG*HSHGSG
Trigger: TCCTGATCCATGTGAGTGCCACCCTGCACACACCCA...ATGGCTACAGTAATCAAGACAGTGTGATTGCTGTAGAAATAGATCAATGGAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR CCA 90 bp TGTGAATCTAATGTAGCCGTATCTCTCAGTATATGCAGCCAAATAAACCATTTGGCCTTAAACCTGCCCTaGGCCGAGCTCATTTTCAGG +
Preference number: 4 (lower is better)
Translates to: CESNVAVSLSICSQINHLALNLP*AELIFR
Trigger: CCTGAAAATGAGCTCGGCCCAGGGCAGGTTTAAGGC...CAAATGGTTTATTTGGCTGCATATACTGAGAGATACGGCTACATTAGATTCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR CCA 90 bp CATTCCCACCAGCAGTGTATTAGAGTTCCAGTTGCTTCTCATCCTCACCATCACTCTTCTTTGGTGAAGTaGCTGTTCAAATCTTTTGCC +
Preference number: 4 (lower is better)
Translates to: HSHQQCIRVPVASHPHHHSSLVK*LFKSFA
Trigger: GGCAAAAGATTTGAACAGCCACTTCACCAAAGAAGA...GTGATGGTGAGGATGAGAAGCAACTGGAACTCTAATACACTGCTGGTGGGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR CCA 90 bp TGTGAATCTAATGTAGCCGTATCTCTCAGTATATGCAGCCAAATAAACCATTTGTTTGATGGAGAAGGCTaGGCTCAGCTGGGAGCCTCA +
Preference number: 4 (lower is better)
Translates to: CESNVAVSLSICSQINHLFDGEG*AQLGAS
Trigger: TGAGGCTCCCAGCTGAGCCCAGCCTTCTCCATCAAA...CAAATGGTTTATTTGGCTGCATATACTGAGAGATACGGCTACATTAGATTCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR TCA 90 bp TCAACATGGATTACTAAATCTTGCCAACAGGTTGAATTATGCAACAAGCAGACACACAGAAGAAGTGAGTaGCGACATGAGCACCGCAGA +
Preference number: 4 (lower is better)
Translates to: STWITKSCQQVELCNKQTHRRSE*RHEHRR
Trigger: TCTGCGGTGCTCATGTCGTCACTCACTTCTTCTGTG...TGTCTGCTTGTTGCATAATTCAACCTGTTGGCAAGATTTAGTAATCCATGTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR TCA 90 bp CATTCCCACCAGCAGTGTATTAGAGTTCCAGTTGCTTCTCATCCTCACCATCACAACCCACAGAAAATTTaGTCCAATAGGTCTATAGCT +
Preference number: 4 (lower is better)
Translates to: HSHQQCIRVPVASHPHHHNPQKI*SNRSIA
Trigger: AGCTATAGACCTATTGGATCAAATTTTCTGTGGGTT...GTGATGGTGAGGATGAGAAGCAACTGGAACTCTAATACACTGCTGGTGGGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641039.1
CDS-3UTR TCA 90 bp TGTTCCATTGATCTATTTCTACAGCAATCACACTGTCTTGATTACTGTAGCCATGGCTGGTTGGTTAGCTaGCAAGCATTACCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: CSIDLFLQQSHCLDYCSHGWLVS*QALPEQ
Trigger: CTGCTCAGGTAATGCTTGTCAGCTAACCAACCAGCC...ATGGCTACAGTAATCAAGACAGTGTGATTGCTGTAGAAATAGATCAATGGAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR TCA 90 bp TGTTCCATTGATCTATTTCTACAGCAATCACACTGTCTTGATTACTGTAGCCATGGTGGGAGAATCACTTaGGCTCAAGAGTGCAAGACC +
Preference number: 4 (lower is better)
Translates to: CSIDLFLQQSHCLDYCSHGGRIT*AQECKT
Trigger: GGTCTTGCACTCTTGAGCTCAAGTGATTCTCCCACC...ATGGCTACAGTAATCAAGACAGTGTGATTGCTGTAGAAATAGATCAATGGAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR TCA 90 bp TGTTCCATTGATCTATTTCTACAGCAATCACACTGTCTTGATTACTGTAGCCATGCCTCCTCTAAATCCTaGGCCCAAGTGATCCTCTTG +
Preference number: 4 (lower is better)
Translates to: CSIDLFLQQSHCLDYCSHASSKS*AQVILL
Trigger: CAAGAGGATCACTTGGGCTCAGGATTTAGAGGAGGC...ATGGCTACAGTAATCAAGACAGTGTGATTGCTGTAGAAATAGATCAATGGAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR TCA 90 bp TGTGAATCTAATGTAGCCGTATCTCTCAGTATATGCAGCCAAATAAACCATTTGGTGTCTATCCACAGGTaGGATCATCACACTGCAGCC +
Preference number: 4 (lower is better)
Translates to: CESNVAVSLSICSQINHLVSIHR*DHHTAA
Trigger: GGCTGCAGTGTGATGATCTCACCTGTGGATAGACAC...CAAATGGTTTATTTGGCTGCATATACTGAGAGATACGGCTACATTAGATTCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR TCA 90 bp CATTCCCACCAGCAGTGTATTAGAGTTCCAGTTGCTTCTCATCCTCACCATCACTGCCTCTTTTCTTACTaGGATGTTTTTATGGAGCTT +
Preference number: 4 (lower is better)
Translates to: HSHQQCIRVPVASHPHHHCLFSY*DVFMEL
Trigger: AAGCTCCATAAAAACATCTCAGTAAGAAAAGAGGCA...GTGATGGTGAGGATGAGAAGCAACTGGAACTCTAATACACTGCTGGTGGGAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR TCA 90 bp CATTCCCACCAGCAGTGTATTAGAGTTCCAGTTGCTTCTCATCCTCACCATCACTCCAAAACTTTCCAATaGCTTCAAACAACAGGGATT +
Preference number: 4 (lower is better)
Translates to: HSHQQCIRVPVASHPHHHSKTFQ*LQTTGI
Trigger: AATCCCTGTTGTTTGAAGTCATTGGAAAGTTTTGGA...GTGATGGTGAGGATGAGAAGCAACTGGAACTCTAATACACTGCTGGTGGGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR TCA 90 bp CATTCCCACCAGCAGTGTATTAGAGTTCCAGTTGCTTCTCATCCTCACCATCACCTCCCAACTTCCAAGTaGCTAATTCATTTCTTGTTA +
Preference number: 4 (lower is better)
Translates to: HSHQQCIRVPVASHPHHHLPTSK*LIHFLL
Trigger: TAACAAGAAATGAATTAGTCACTTGGAAGTTGGGAG...GTGATGGTGAGGATGAGAAGCAACTGGAACTCTAATACACTGCTGGTGGGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR GCA 90 bp TGTTCCATTGATCTATTTCTACAGCAATCACACTGTCTTGATTACTGTAGCCATCCCTTGGCTCAGGTTTaGCCCTTTCATCCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: CSIDLFLQQSHCLDYCSHPLAQV*PFHPSP
Trigger: TGGAGAAGGATGAAAGGGGCAAACCTGAGCCAAGGG...ATGGCTACAGTAATCAAGACAGTGTGATTGCTGTAGAAATAGATCAATGGAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR GCA 90 bp TCAACATGGATTACTAAATCTTGCCAACAGGTTGAATTATGCAACAAGCAGACACCCTTGGCTCAGGTTTaGCCCTTTCATCCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: STWITKSCQQVELCNKQTPLAQV*PFHPSP
Trigger: TGGAGAAGGATGAAAGGGGCAAACCTGAGCCAAGGG...TGTCTGCTTGTTGCATAATTCAACCTGTTGGCAAGATTTAGTAATCCATGTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR CCA 90 bp TGTGAATCTAATGTAGCCGTATCTCTCAGTATATGCAGCCAAATAAACCATTTGAGGGTGGCACTCACATaGATCAGGAGGAACATGACC +
Preference number: 4 (lower is better)
Translates to: CESNVAVSLSICSQINHLRVALT*IRRNMT
Trigger: GGTCATGTTCCTCCTGATCCATGTGAGTGCCACCCT...CAAATGGTTTATTTGGCTGCATATACTGAGAGATACGGCTACATTAGATTCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR CCA 90 bp CATTCCCACCAGCAGTGTATTAGAGTTCCAGTTGCTTCTCATCCTCACCATCACCCTAGGAATCCAGTTTaGGTTCATTCTATTAGTCAA +
Preference number: 4 (lower is better)
Translates to: HSHQQCIRVPVASHPHHHPRNPV*VHSISQ
Trigger: TTGACTAATAGAATGAACCCAAACTGGATTCCTAGG...GTGATGGTGAGGATGAGAAGCAACTGGAACTCTAATACACTGCTGGTGGGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR TCA 90 bp TGTTCCATTGATCTATTTCTACAGCAATCACACTGTCTTGATTACTGTAGCCATAGGAGATCAAGATGGTaGGGGTGCAGCTCAAAAGGT +
Preference number: 4 (lower is better)
Translates to: CSIDLFLQQSHCLDYCSHRRSRW*GCSSKG
Trigger: ACCTTTTGAGCTGCACCCTCACCATCTTGATCTCCT...ATGGCTACAGTAATCAAGACAGTGTGATTGCTGTAGAAATAGATCAATGGAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR TCA 90 bp TCAACATGGATTACTAAATCTTGCCAACAGGTTGAATTATGCAACAAGCAGACAAGGTTGAGGCTGCAATaGGCAATGTTCATGCCACTG +
Preference number: 4 (lower is better)
Translates to: STWITKSCQQVELCNKQTRLRLQ*AMFMPL
Trigger: CAGTGGCATGAACATTGCTCATTGCAGCCTCAACCT...TGTCTGCTTGTTGCATAATTCAACCTGTTGGCAAGATTTAGTAATCCATGTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR TCA 90 bp TGTGAATCTAATGTAGCCGTATCTCTCAGTATATGCAGCCAAATAAACCATTTGAGGTTGAGGCTGCAATaGGCAATGTTCATGCCACTG +
Preference number: 4 (lower is better)
Translates to: CESNVAVSLSICSQINHLRLRLQ*AMFMPL
Trigger: CAGTGGCATGAACATTGCTCATTGCAGCCTCAACCT...CAAATGGTTTATTTGGCTGCATATACTGAGAGATACGGCTACATTAGATTCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR TCA 90 bp TCCAGTTTCTGCCCACTGCCCAGTACCAATGTCAATGCCACATGTTTTTGTTACGATTATTCCAATCCATaGATATTGAAGGTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: SSFCPLPSTNVNATCFCYDYSNP*ILKVSP
Trigger: TGGAGAGACCTTCAATATTCATGGATTGGAATAATC...GTAACAAAAACATGTGGCATTGACATTGGTACTGGGCAGTGGGCAGAAACTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR TCA 90 bp TCCAGTTTCTGCCCACTGCCCAGTACCAATGTCAATGCCACATGTTTTTGTTACATGGTAGGTATCTATTaGACATTTTGTGAAACCACC +
Preference number: 4 (lower is better)
Translates to: SSFCPLPSTNVNATCFCYMVGIY*TFCETT
Trigger: GGTGGTTTCACAAAATGTTCAATAGATACCTACCAT...GTAACAAAAACATGTGGCATTGACATTGGTACTGGGCAGTGGGCAGAAACTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR TCA 90 bp TGTGAATCTAATGTAGCCGTATCTCTCAGTATATGCAGCCAAATAAACCATTTGATACATCTGGCACTTTaGTGGAGAAGGCTGGGCTCA +
Preference number: 4 (lower is better)
Translates to: CESNVAVSLSICSQINHLIHLAL*WRRLGS
Trigger: TGAGCCCAGCCTTCTCCATCAAAGTGCCAGATGTAT...CAAATGGTTTATTTGGCTGCATATACTGAGAGATACGGCTACATTAGATTCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR TCA 90 bp TCCAGTTTCTGCCCACTGCCCAGTACCAATGTCAATGCCACATGTTTTTGTTACCTCCCAACTTCCAAGTaGCTAATTCATTTCTTGTTA +
Preference number: 4 (lower is better)
Translates to: SSFCPLPSTNVNATCFCYLPTSK*LIHFLL
Trigger: TAACAAGAAATGAATTAGTCACTTGGAAGTTGGGAG...GTAACAAAAACATGTGGCATTGACATTGGTACTGGGCAGTGGGCAGAAACTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR TCA 90 bp TCCAGTTTCTGCCCACTGCCCAGTACCAATGTCAATGCCACATGTTTTTGTTACGAACATTTTGCCATCTaGATAAGATGGGAAAGAGAA +
Preference number: 4 (lower is better)
Translates to: SSFCPLPSTNVNATCFCYEHFAI*IRWERE
Trigger: TTCTCTTTCCCATCTTATTCAGATGGCAAAATGTTC...GTAACAAAAACATGTGGCATTGACATTGGTACTGGGCAGTGGGCAGAAACTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR GCA 90 bp CATTCCCACCAGCAGTGTATTAGAGTTCCAGTTGCTTCTCATCCTCACCATCACAGTTTGAGAACATTTTaGCATCTGAATAAGATGGGA +
Preference number: 4 (lower is better)
Translates to: HSHQQCIRVPVASHPHHHSLRTF*HLNKMG
Trigger: TCCCATCTTATTCAGATGGCAAAATGTTCTCAAACT...GTGATGGTGAGGATGAGAAGCAACTGGAACTCTAATACACTGCTGGTGGGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR CCA 90 bp TCAACATGGATTACTAAATCTTGCCAACAGGTTGAATTATGCAACAAGCAGACATCAAACTCCATCCCTTaGCTCAGGTTTGCCCCTTTC +
Preference number: 4 (lower is better)
Translates to: STWITKSCQQVELCNKQTSNSIP*LRFAPF
Trigger: GAAAGGGGCAAACCTGAGCCAAGGGATGGAGTTTGA...TGTCTGCTTGTTGCATAATTCAACCTGTTGGCAAGATTTAGTAATCCATGTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR CCA 90 bp TGTTCCATTGATCTATTTCTACAGCAATCACACTGTCTTGATTACTGTAGCCATAGGGTCTTCTCTCCTTaGTTGGCTGGTTGGTTAGCT +
Preference number: 4 (lower is better)
Translates to: CSIDLFLQQSHCLDYCSHRVFSP*LAGWLA
Trigger: AGCTAACCAACCAGCCAACCAAGGAGAGAAGACCCT...ATGGCTACAGTAATCAAGACAGTGTGATTGCTGTAGAAATAGATCAATGGAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR CCA 90 bp TGTGAATCTAATGTAGCCGTATCTCTCAGTATATGCAGCCAAATAAACCATTTGCTATCAGTCTCTTCATaGCCCTTCCAGTTTCTGCCC +
Preference number: 4 (lower is better)
Translates to: CESNVAVSLSICSQINHLLSVSS*PFQFLP
Trigger: GGGCAGAAACTGGAAGGGCCATGAAGAGACTGATAG...CAAATGGTTTATTTGGCTGCATATACTGAGAGATACGGCTACATTAGATTCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
3UTR CAA 72 bp GCATCTCAACATGGATTACTAAATCTTGCCAACAGGTaGAATTATGCAACAAGCAGACACACCCTTCTCACT +
Preference number: 4 (lower is better)
Translates to: ASQHGLLNLANR*NYATSRHTLLT
Trigger: AGTGAGAAGGGTGTGTCTGCTTGTTGCATAATTCAACCTGTTGGCAAGATTTAGTAATCCATGTTGAGATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR TCA 90 bp TCAACATGGATTACTAAATCTTGCCAACAGGTTGAATTATGCAACAAGCAGACACAGGATCTCACACAGTaGGGTGTCTACACAAGACAA +
Preference number: 4 (lower is better)
Translates to: STWITKSCQQVELCNKQTQDLTQ*GVYTRQ
Trigger: TTGTCTTGTGTAGACACCTCACTGTGTGAGATCCTG...TGTCTGCTTGTTGCATAATTCAACCTGTTGGCAAGATTTAGTAATCCATGTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR TCA 90 bp TGTGAATCTAATGTAGCCGTATCTCTCAGTATATGCAGCCAAATAAACCATTTGGTGCAAGTCCTCTTATaGCCTAAGCTCAGAAGTCCT +
Preference number: 4 (lower is better)
Translates to: CESNVAVSLSICSQINHLVQVLL*PKLRSP
Trigger: AGGACTTCTGAGCTTAGGTCATAAGAGGACTTGCAC...CAAATGGTTTATTTGGCTGCATATACTGAGAGATACGGCTACATTAGATTCACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR CCA 90 bp TGTGAATCTAATGTAGCCGTATCTCTCAGTATATGCAGCCAAATAAACCATTTGGATAGCACTCACTGGTaGCAAAACCCGCATAGAAGA +
Preference number: 4 (lower is better)
Translates to: CESNVAVSLSICSQINHLDSTHW*QNPHRR
Trigger: TCTTCTATGCGGGTTTTGCCACCAGTGAGTGCTATC...CAAATGGTTTATTTGGCTGCATATACTGAGAGATACGGCTACATTAGATTCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR TCA 90 bp TCAACATGGATTACTAAATCTTGCCAACAGGTTGAATTATGCAACAAGCAGACATTCCCTGAGCAACAGTaGTCCCAAACAATGGTTCTT +
Preference number: 4 (lower is better)
Translates to: STWITKSCQQVELCNKQTFPEQQ*SQTMVL
Trigger: AAGAACCATTGTTTGGGATCACTGTTGCTCAGGGAA...TGTCTGCTTGTTGCATAATTCAACCTGTTGGCAAGATTTAGTAATCCATGTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641039.1
CDS-3UTR GCA 90 bp TGTGAATCTAATGTAGCCGTATCTCTCAGTATATGCAGCCAAATAAACCATTTGAGAATTGAGGAATCCTaGACTGTAGGAGCCCACAAT +
Preference number: 4 (lower is better)
Translates to: CESNVAVSLSICSQINHLRIEES*TVGAHN
Trigger: ATTGTGGGCTCCTACAGTGCAGGATTCCTCAATTCT...CAAATGGTTTATTTGGCTGCATATACTGAGAGATACGGCTACATTAGATTCACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR GCA 90 bp TGTGAATCTAATGTAGCCGTATCTCTCAGTATATGCAGCCAAATAAACCATTTGGCGTCACCTACCTTTTaGACTAGAAATGTCCCATTT +
Preference number: 4 (lower is better)
Translates to: CESNVAVSLSICSQINHLASPTF*TRNVPF
Trigger: AAATGGGACATTTCTAGTGCAAAAGGTAGGTGACGC...CAAATGGTTTATTTGGCTGCATATACTGAGAGATACGGCTACATTAGATTCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR CCA 90 bp TGTTCCATTGATCTATTTCTACAGCAATCACACTGTCTTGATTACTGTAGCCATTTGTACTGGGACAACTaGATAGCCACATGCAAAAGA +
Preference number: 4 (lower is better)
Translates to: CSIDLFLQQSHCLDYCSHLYWDN*IATCKR
Trigger: TCTTTTGCATGTGGCTATCCAGTTGTCCCAGTACAA...ATGGCTACAGTAATCAAGACAGTGTGATTGCTGTAGAAATAGATCAATGGAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
3UTR CAA 72 bp ATAGATCATGCTTCCTGTGTCATATCTCAGAAATCTTaGGCTACCTCAAGGTCACAAAAGTTTTCTCCTGTT +
Preference number: 4 (lower is better)
Translates to: IDHASCVISQKS*ATSRSQKFSPV
Trigger: AACAGGAGAAAACTTTTGTGACCTTGAGGTAGCCAAAGATTTCTGAGATATGACACAGGAAGCATGATCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR TCA 90 bp TCAACATGGATTACTAAATCTTGCCAACAGGTTGAATTATGCAACAAGCAGACATCCTATGCCATTTGTTaGAAAGACTGTTCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: STWITKSCQQVELCNKQTSYAIC*KDCSFP
Trigger: AGGGAAAGAACAGTCTTTTCAACAAATGGCATAGGA...TGTCTGCTTGTTGCATAATTCAACCTGTTGGCAAGATTTAGTAATCCATGTTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR TCA 90 bp TGTTCCATTGATCTATTTCTACAGCAATCACACTGTCTTGATTACTGTAGCCATACTGGGAAAAATGAATaGAGCATCTCAACATGGATT +
Preference number: 4 (lower is better)
Translates to: CSIDLFLQQSHCLDYCSHTGKNE*SISTWI
Trigger: AATCCATGTTGAGATGCTTCATTCATTTTTCCCAGT...ATGGCTACAGTAATCAAGACAGTGTGATTGCTGTAGAAATAGATCAATGGAACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR TCA 90 bp TGTGAATCTAATGTAGCCGTATCTCTCAGTATATGCAGCCAAATAAACCATTTGTCCAAAACTTTCCAATaGCTTCAAACAACAGGGATT +
Preference number: 4 (lower is better)
Translates to: CESNVAVSLSICSQINHLSKTFQ*LQTTGI
Trigger: AATCCCTGTTGTTTGAAGTCATTGGAAAGTTTTGGA...CAAATGGTTTATTTGGCTGCATATACTGAGAGATACGGCTACATTAGATTCACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR TCA 90 bp TGTGAATCTAATGTAGCCGTATCTCTCAGTATATGCAGCCAAATAAACCATTTGCTTAAACATTCTGCTTaGAAATCTCCTTTGTCGGAT +
Preference number: 4 (lower is better)
Translates to: CESNVAVSLSICSQINHLLKHSA*KSPLSD
Trigger: ATCCGACAAAGGAGATTTTCAAGCAGAATGTTTAAG...CAAATGGTTTATTTGGCTGCATATACTGAGAGATACGGCTACATTAGATTCACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR TCA 90 bp TGTTCCATTGATCTATTTCTACAGCAATCACACTGTCTTGATTACTGTAGCCATCTTAAACATTCTGCTTaGAAATCTCCTTTGTCGGAT +
Preference number: 4 (lower is better)
Translates to: CSIDLFLQQSHCLDYCSHLKHSA*KSPLSD
Trigger: ATCCGACAAAGGAGATTTTCAAGCAGAATGTTTAAG...ATGGCTACAGTAATCAAGACAGTGTGATTGCTGTAGAAATAGATCAATGGAACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR GCA 90 bp TCAACATGGATTACTAAATCTTGCCAACAGGTTGAATTATGCAACAAGCAGACAAGAACATCTGAGTCATaGAGCCAAAATAAGAGATCA +
Preference number: 4 (lower is better)
Translates to: STWITKSCQQVELCNKQTRTSES*SQNKRS
Trigger: TGATCTCTTATTTTGGCTGCATGACTCAGATGTTCT...TGTCTGCTTGTTGCATAATTCAACCTGTTGGCAAGATTTAGTAATCCATGTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR GCA 90 bp TCAACATGGATTACTAAATCTTGCCAACAGGTTGAATTATGCAACAAGCAGACAATCCTCACCATCACTTaGTATAGTCAATCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: STWITKSCQQVELCNKQTILTIT*YSQSCS
Trigger: TGAACAAGATTGACTATAGCAAGTGATGGTGAGGAT...TGTCTGCTTGTTGCATAATTCAACCTGTTGGCAAGATTTAGTAATCCATGTTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR GCA 90 bp TGTTCCATTGATCTATTTCTACAGCAATCACACTGTCTTGATTACTGTAGCCATCTTGTTATCTACTGCTaGGTAATAAACTGCTCCAAA +
Preference number: 4 (lower is better)
Translates to: CSIDLFLQQSHCLDYCSHLVIYC*VINCSK
Trigger: TTTGGAGCAGTTTATTACGCAGCAGTAGATAACAAG...ATGGCTACAGTAATCAAGACAGTGTGATTGCTGTAGAAATAGATCAATGGAACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR GCA 90 bp TGTGAATCTAATGTAGCCGTATCTCTCAGTATATGCAGCCAAATAAACCATTTGTTCATCCTTCTCCAGTaGTCTGATGATAATCTAACA +
Preference number: 4 (lower is better)
Translates to: CESNVAVSLSICSQINHLFILLQ*SDDNLT
Trigger: TGTTAGATTATCATCAGAGCACTGGAGAAGGATGAA...CAAATGGTTTATTTGGCTGCATATACTGAGAGATACGGCTACATTAGATTCACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641697.1
CDS-3UTR CCA 90 bp TCAACATGGATTACTAAATCTTGCCAACAGGTTGAATTATGCAACAAGCAGACAAAGATACAGCCAGTGTaGATAAGAGAATTGAGGAAT +
Preference number: 4 (lower is better)
Translates to: STWITKSCQQVELCNKQTKIQPV*IRELRN
Trigger: ATTCCTCAATTCTCTTATCCACACTGGCTGTATCTT...TGTCTGCTTGTTGCATAATTCAACCTGTTGGCAAGATTTAGTAATCCATGTTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR CCA 90 bp TGTTCCATTGATCTATTTCTACAGCAATCACACTGTCTTGATTACTGTAGCCATTTTGTGGTCAAATTGTaGTCTCTCTATTCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: CSIDLFLQQSHCLDYCSHFVVKL*SLYSVP
Trigger: TGGAACAGAATAGAGAGACCACAATTTGACCACAAA...ATGGCTACAGTAATCAAGACAGTGTGATTGCTGTAGAAATAGATCAATGGAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR CCA 90 bp TGTGAATCTAATGTAGCCGTATCTCTCAGTATATGCAGCCAAATAAACCATTTGTTTGTGGTCAAATTGTaGTCTCTCTATTCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: CESNVAVSLSICSQINHLFVVKL*SLYSVP
Trigger: TGGAACAGAATAGAGAGACCACAATTTGACCACAAA...CAAATGGTTTATTTGGCTGCATATACTGAGAGATACGGCTACATTAGATTCACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR CCA 90 bp TGTGAATCTAATGTAGCCGTATCTCTCAGTATATGCAGCCAAATAAACCATTTGCCTAGGAATCCAGTTTaGGTTCATTCTATTAGTCAA +
Preference number: 4 (lower is better)
Translates to: CESNVAVSLSICSQINHLPRNPV*VHSISQ
Trigger: TTGACTAATAGAATGAACCCAAACTGGATTCCTAGG...CAAATGGTTTATTTGGCTGCATATACTGAGAGATACGGCTACATTAGATTCACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR GCA 90 bp TGTGAATCTAATGTAGCCGTATCTCTCAGTATATGCAGCCAAATAAACCATTTGCAGTACCAATGTCAATaGCACATGTTTTTGTTACAA +
Preference number: 4 (lower is better)
Translates to: CESNVAVSLSICSQINHLQYQCQ*HMFLLQ
Trigger: TTGTAACAAAAACATGTGGCATTGACATTGGTACTG...CAAATGGTTTATTTGGCTGCATATACTGAGAGATACGGCTACATTAGATTCACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR GCA 90 bp TGTGAATCTAATGTAGCCGTATCTCTCAGTATATGCAGCCAAATAAACCATTTGGTATCTCTCAGTATATaGAGCCAAATAAACCATTTG +
Preference number: 4 (lower is better)
Translates to: CESNVAVSLSICSQINHLVSLSI*SQINHL
Trigger: CAAATGGTTTATTTGGCTGCATATACTGAGAGATAC...CAAATGGTTTATTTGGCTGCATATACTGAGAGATACGGCTACATTAGATTCACA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR GCA 90 bp TGTTCCATTGATCTATTTCTACAGCAATCACACTGTCTTGATTACTGTAGCCATAGTTTGAGAACATTTTaGCATCTGAATAAGATGGGA +
Preference number: 4 (lower is better)
Translates to: CSIDLFLQQSHCLDYCSHSLRTF*HLNKMG
Trigger: TCCCATCTTATTCAGATGGCAAAATGTTCTCAAACT...ATGGCTACAGTAATCAAGACAGTGTGATTGCTGTAGAAATAGATCAATGGAACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR GCA 90 bp TGTGAATCTAATGTAGCCGTATCTCTCAGTATATGCAGCCAAATAAACCATTTGAACTGGATAGCCACATaGAAAAGAATGAAGTTTTTC +
Preference number: 4 (lower is better)
Translates to: CESNVAVSLSICSQINHLNWIAT*KRMKFF
Trigger: GAAAAACTTCATTCTTTTGCATGTGGCTATCCAGTT...CAAATGGTTTATTTGGCTGCATATACTGAGAGATACGGCTACATTAGATTCACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR CCA 90 bp TCAACATGGATTACTAAATCTTGCCAACAGGTTGAATTATGCAACAAGCAGACATGGTGGGATTTTGATTaGGATAGAATTGAATCTCAA +
Preference number: 4 (lower is better)
Translates to: STWITKSCQQVELCNKQTWWDFD*DRIESQ
Trigger: TTGAGATTCAATTCTATCCCAATCAAAATCCCACCA...TGTCTGCTTGTTGCATAATTCAACCTGTTGGCAAGATTTAGTAATCCATGTTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
3UTR CAA 72 bp TTTGTGGTCAAATTGTGGTCTCTCTATTCTGTTCCATaGATCTATTTCTACAGCAATCACACTGTCTTGATT +
Preference number: 4 (lower is better)
Translates to: FVVKLWSLYSVP*IYFYSNHTVLI
Trigger: AATCAAGACAGTGTGATTGCTGTAGAAATAGATCAATGGAACAGAATAGAGAGACCACAATTTGACCACAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
3UTR CAA 72 bp CACTGCACTTGGCCTTTTTACTACTGTAAGTCTCTTTaGATGTATTTTAGTTTGAATGAGGCTCAACTTATT +
Preference number: 4 (lower is better)
Translates to: HCTWPFYYCKSL*MYFSLNEAQLI
Trigger: AATAAGTTGAGCCTCATTCAAACTAAAATACATCAAAAGAGACTTACAGTAGTAAAAAGGCCAAGTGCAGTG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS CCA 90 bp AGCTGGGGGTCAGTGGTGAGGCCCAAGAGCTCAAACTCCATCCCTTaGCTCAGGTTTGCCCCTTTCATCCTTCTCCAGTGCTCTGCGATG +
Preference number: 5 (lower is better)
Translates to: SWGSVVRPKSSNSIP*LRFAPFILLQCSAM
Trigger: CATCGCAGAGCACTGGAGAAGGATGAAAGGGGCAAACCTGAGCCAAGGGATGGAGTTTGAGCTCTTGGGCCTCACCACTGACCCCCAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304418.5
ENST00000641822.1
CDS CCA 90 bp AGCTGGGGGTCAGTGGTGAGGCCCAAGAGCTCAAACTCCATCCCTTaGCTCAGGTTTGCCCCTTTCATCCTTCTCCAGTGCTCCGACTCA +
Preference number: 5 (lower is better)
Translates to: SWGSVVRPKSSNSIP*LRFAPFILLQCSDS
Trigger: TGAGTCGGAGCACTGGAGAAGGATGAAAGGGGCAAACCTGAGCCAAGGGATGGAGTTTGAGCTCTTGGGCCTCACCACTGACCCCCAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641039.1
CDS GCA 90 bp AGTGGTGAGGCCCAAGAGCTCAAACTCCATCCCTTGGCTCAGGTTTaGCCCTTTCATCCTTCTCCAGTGCTCCGACTCATTGCCCCCATC +
Preference number: 5 (lower is better)
Translates to: SGEAQELKLHPLAQV*PFHPSPVLRLIAPI
Trigger: GATGGGGGCAATGAGTCGGAGCACTGGAGAAGGATGAAAGGGGCAAACCTGAGCCAAGGGATGGAGTTTGAGCTCTTGGGCCTCACCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641039.1
CDS-3UTR CAA 90 bp GCCAGACTTCTTATGTGGCGGCTCAGGGATCCCAGAGAGTGTTCCCAGACAGCTTCCCTTGGCTCAGGTTaGCCCCTTTCATCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: ARLLMWRLRDPRECSQTASLGSG*PLSSFS
Trigger: GGAGAAGGATGAAAGGGGCAAACCTGAGCCAAGGGA...AGCTGTCTGGGAACACTCTCTGGGATCCCTGAGCCGCCACATAAGAAGTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR CAA 90 bp GCCAGACTTCTTATGTGGCGGCTCAGGGATCCCAGAGAGTGTTCCCAGACAGCTTCCCATTTTGCAGGTTaGTCACGCTGCCTCCTGACC +
Preference number: 5 (lower is better)
Translates to: ARLLMWRLRDPRECSQTASHFAG*SRCLLT
Trigger: GGTCAGGAGGCAGCGTGACAAACCTGCAAAATGGGA...AGCTGTCTGGGAACACTCTCTGGGATCCCTGAGCCGCCACATAAGAAGTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS CCA 90 bp AGCTGGGGGTCAGTGGTGAGGCCCAAGAGCTCAAACTCCATCCCTTaGCTCAGGTTTGCCCCTTTCATCCTTCTCCAGTGCTCTGATGAT +
Preference number: 5 (lower is better)
Translates to: SWGSVVRPKSSNSIP*LRFAPFILLQCSDD
Trigger: ATCATCAGAGCACTGGAGAAGGATGAAAGGGGCAAACCTGAGCCAAGGGATGGAGTTTGAGCTCTTGGGCCTCACCACTGACCCCCAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641697.1
CDS-3UTR CAA 90 bp GGTGGGCATGGGAATGTGCTCAGGGTGACACCACCTAAGGTAAAAGTTCCCTTGCAGGATCTTGCCCTGTaGTCCAGGCTGGAGTCCAGT +
Preference number: 5 (lower is better)
Translates to: GGHGNVLRVTPPKVKVPLQDLAL*SRLESS
Trigger: ACTGGACTCCAGCCTGGACAACAGGGCAAGATCCTG...CAAGGGAACTTTTACCTTAGGTGGTGTCACCCTGAGCACATTCCCATGCCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS GCA 90 bp AGTGGTGAGGCCCAAGAGCTCAAACTCCATCCCTTGGCTCAGGTTTaGCCCTTTCATCCTTCTCCAGTGCTCTGCGATGGAGAAAGAAGG +
Preference number: 5 (lower is better)
Translates to: SGEAQELKLHPLAQV*PFHPSPVLCDGERR
Trigger: CCTTCTTTCTCCATCGCAGAGCACTGGAGAAGGATGAAAGGGGCAAACCTGAGCCAAGGGATGGAGTTTGAGCTCTTGGGCCTCACCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304418.5
ENST00000641822.1
CDS-3UTR CAA 90 bp GCCAGACTTCTTATGTGGCGGCTCAGGGATCCCAGAGAGTGTTCCCAGACAGCTACCTGTGGCTTCTCTTaGTGTGTGTGTGTGTGTGTG +
Preference number: 5 (lower is better)
Translates to: ARLLMWRLRDPRECSQTATCGFS*CVCVCV
Trigger: CACACACACACACACACACAAAGAGAAGCCACAGGT...AGCTGTCTGGGAACACTCTCTGGGATCCCTGAGCCGCCACATAAGAAGTCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR CAA 90 bp GGTGGGCATGGGAATGTGCTCAGGGTGACACCACCTAAGGTAAAAGTTCCCTTGGTCTTCTCTCCTTGGTaGGCTGGTTGGTTAGCTGAC +
Preference number: 5 (lower is better)
Translates to: GGHGNVLRVTPPKVKVPLVFSPW*AGWLAD
Trigger: GTCAGCTAACCAACCAGCCAACCAAGGAGAGAAGAC...CAAGGGAACTTTTACCTTAGGTGGTGTCACCCTGAGCACATTCCCATGCCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR CAA 90 bp GGTGGGCATGGGAATGTGCTCAGGGTGACACCACCTAAGGTAAAAGTTCCCTTGACCTGTGGCTTCTCTTaGTGTGTGTGTGTGTGTGTG +
Preference number: 5 (lower is better)
Translates to: GGHGNVLRVTPPKVKVPLTCGFS*CVCVCV
Trigger: CACACACACACACACACACAAAGAGAAGCCACAGGT...CAAGGGAACTTTTACCTTAGGTGGTGTCACCCTGAGCACATTCCCATGCCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS GCA 90 bp CAGACTAAAGATACAGCCAGTGTGGATAAGAGAATTGAGGAATCCTaGACTGTAGGAGCCCACAATCAGCGAGGCACAGACCTCAGGAGA +
Preference number: 5 (lower is better)
Translates to: QTKDTASVDKRIEES*TVGAHNQRGTDLRR
Trigger: TCTCCTGAGGTCTGTGCCTCGCTGATTGTGGGCTCCTACAGTGCAGGATTCCTCAATTCTCTTATCCACACTGGCTGTATCTTTAGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304418.5
ENST00000641039.1
ENST00000641697.1
ENST00000641822.1
CDS-3UTR CAA 90 bp CATTCCCACCAGCAGTGTATTAGAGTTCCAGTTGCTTCTCATCCTCACCATCACCTCAAACTCCATCCCTaGGCTCAGGTTTGCCCCTTT +
Preference number: 5 (lower is better)
Translates to: HSHQQCIRVPVASHPHHHLKLHP*AQVCPF
Trigger: AAAGGGGCAAACCTGAGCCAAGGGATGGAGTTTGAG...GTGATGGTGAGGATGAGAAGCAACTGGAACTCTAATACACTGCTGGTGGGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR CAA 90 bp GGTGGGCATGGGAATGTGCTCAGGGTGACACCACCTAAGGTAAAAGTTCCCTTGGTTCACAGGAGAAGCTaGTTACATGTGCAGATTCCA +
Preference number: 5 (lower is better)
Translates to: GGHGNVLRVTPPKVKVPLVHRRS*LHVQIP
Trigger: TGGAATCTGCACATGTAACAAGCTTCTCCTGTGAAC...CAAGGGAACTTTTACCTTAGGTGGTGTCACCCTGAGCACATTCCCATGCCCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641039.1
CDS-3UTR CAA 90 bp TCCAGTTTCTGCCCACTGCCCAGTACCAATGTCAATGCCACATGTTTTTGTTACGTCTTCTCTCCTTGGTaGGCTGGTTGGTTAGCTGAC +
Preference number: 5 (lower is better)
Translates to: SSFCPLPSTNVNATCFCYVFSPW*AGWLAD
Trigger: GTCAGCTAACCAACCAGCCAACCAAGGAGAGAAGAC...GTAACAAAAACATGTGGCATTGACATTGGTACTGGGCAGTGGGCAGAAACTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR CAA 90 bp GCCAGACTTCTTATGTGGCGGCTCAGGGATCCCAGAGAGTGTTCCCAGACAGCTACTACCCCCATTATTTaGGTAATTATAGCAGTATGG +
Preference number: 5 (lower is better)
Translates to: ARLLMWRLRDPRECSQTATTPII*VIIAVW
Trigger: CCATACTGCTATAATTACCAAAATAATGGGGGTAGT...AGCTGTCTGGGAACACTCTCTGGGATCCCTGAGCCGCCACATAAGAAGTCTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR CAA 90 bp GCCAGACTTCTTATGTGGCGGCTCAGGGATCCCAGAGAGTGTTCCCAGACAGCTGTCAGACTTTCAACTTaGTTCTTTTTCAAAGTTGCG +
Preference number: 5 (lower is better)
Translates to: ARLLMWRLRDPRECSQTAVRLST*FFFKVA
Trigger: CGCAACTTTGAAAAAGAACAAAGTTGAAAGTCTGAC...AGCTGTCTGGGAACACTCTCTGGGATCCCTGAGCCGCCACATAAGAAGTCTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR CAA 90 bp GGTGGGCATGGGAATGTGCTCAGGGTGACACCACCTAAGGTAAAAGTTCCCTTGCTGTCCACATTTTGTTaGTGGTCAAATTGTGGTCTC +
Preference number: 5 (lower is better)
Translates to: GGHGNVLRVTPPKVKVPLLSTFC*WSNCGL
Trigger: GAGACCACAATTTGACCACAAACAAAATGTGGACAG...CAAGGGAACTTTTACCTTAGGTGGTGTCACCCTGAGCACATTCCCATGCCCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS TCA 90 bp GAGAAAGAAGGCACCACCATAAATGAGGTTGAACACCTGGGGCTCTaGCTGGGTTTAATTCTGCCTAAGGACAGCCTTCTGAAGATGAGT +
Preference number: 5 (lower is better)
Translates to: EKEGTTINEVEHLGL*LGLILPKDSLLKMS
Trigger: ACTCATCTTCAGAAGGCTGTCCTTAGGCAGAATTAAACCCAGTCAGAGCCCCAGGTGTTCAACCTCATTTATGGTGGTGCCTTCTTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304418.5
ENST00000641822.1
CDS TCA 90 bp CAAAAGGTTGAAACCAGCAAAAATGAAGAGCAGGATCTCACACAGTaGGGTGTCTACACAAGACAAGGACAGGATGGGTGGCCCATCACA +
Preference number: 5 (lower is better)
Translates to: QKVETSKNEEQDLTQ*GVYTRQGQDGWPIT
Trigger: TGTGATGGGCCACCCATCCTGTCCTTGTCTTGTGTAGACACCTCACTGTGTGAGATCCTGCTCTTCATTTTTGCTGGTTTCAACCTTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000304418.5
ENST00000641039.1
ENST00000641697.1
ENST00000641822.1
CDS-3UTR CAA 90 bp GGTGGGCATGGGAATGTGCTCAGGGTGACACCACCTAAGGTAAAAGTTCCCTTGGGCTGTTCAAATCTTTaGCCTCTTTTCTTACTGAGA +
Preference number: 5 (lower is better)
Translates to: GGHGNVLRVTPPKVKVPLGCSNL*PLFLLR
Trigger: TCTCAGTAAGAAAAGAGGCAAAAGATTTGAACAGCC...CAAGGGAACTTTTACCTTAGGTGGTGTCACCCTGAGCACATTCCCATGCCCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS GCA 90 bp AGTAAGCTGCCTTGCCCAAGGTTCACAGGAGAAGCTTGTTACATGTaGAGATTCCAGGTCCCAACCCACAGAAAATTTGATCCAATAGGT +
Preference number: 5 (lower is better)
Translates to: SKLPCPRFTGEACYM*RFQVPTHRKFDPIG
Trigger: ACCTATTGGATCAAATTTTCTGTGGGTTGGGACCTGGAATCTGCACATGTAACAAGCTTCTCCTGTGAACCTTGGGCAAGGCAGCTTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641039.1
CDS GCA 90 bp AGCACTCACTGGTGGCAAAACCCGCATAGAAGAACATCTGAGTCATaGAGCCAAAATAAGAGATCACTTTCCTCTTGGCCAAGAAGTTCA +
Preference number: 5 (lower is better)
Translates to: STHWWQNPHRRTSES*SQNKRSLSSWPRSS
Trigger: TGAACTTCTTGGCCAAGAGGAAAGTGATCTCTTATTTTGGCTGCATGACTCAGATGTTCTTCTATGCGGGTTTTGCCACCAGTGAGTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304418.5
ENST00000641039.1
ENST00000641697.1
ENST00000641822.1
CDS-3UTR CAA 90 bp TGTGAATCTAATGTAGCCGTATCTCTCAGTATATGCAGCCAAATAAACCATTTGTCCCTTGGCTCAGGTTaGCCCCTTTCATCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: CESNVAVSLSICSQINHLSLGSG*PLSSFS
Trigger: GGAGAAGGATGAAAGGGGCAAACCTGAGCCAAGGGA...CAAATGGTTTATTTGGCTGCATATACTGAGAGATACGGCTACATTAGATTCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR CAA 90 bp TCAACATGGATTACTAAATCTTGCCAACAGGTTGAATTATGCAACAAGCAGACATGTAATCCCTGCATTTaGGGAGGCCGAAGTGGGCAG +
Preference number: 5 (lower is better)
Translates to: STWITKSCQQVELCNKQTCNPCI*GGRSGQ
Trigger: CTGCCCACTTCGGCCTCCCAAAATGCAGGGATTACA...TGTCTGCTTGTTGCATAATTCAACCTGTTGGCAAGATTTAGTAATCCATGTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR CAA 90 bp CATTCCCACCAGCAGTGTATTAGAGTTCCAGTTGCTTCTCATCCTCACCATCACATTGCCTTGGTAACTTaGTTGAAAATCAGCTGTCCA +
Preference number: 5 (lower is better)
Translates to: HSHQQCIRVPVASHPHHHIALVT*LKISCP
Trigger: TGGACAGCTGATTTTCAACAAAGTTACCAAGGCAAT...GTGATGGTGAGGATGAGAAGCAACTGGAACTCTAATACACTGCTGGTGGGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR CAA 90 bp CATTCCCACCAGCAGTGTATTAGAGTTCCAGTTGCTTCTCATCCTCACCATCACCAATGCCACATGTTTTaGTTACAAAAGCACTCCCAA +
Preference number: 5 (lower is better)
Translates to: HSHQQCIRVPVASHPHHHQCHMF*LQKHSQ
Trigger: TTGGGAGTGCTTTTGTAACAAAAACATGTGGCATTG...GTGATGGTGAGGATGAGAAGCAACTGGAACTCTAATACACTGCTGGTGGGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR CAA 90 bp TCCAGTTTCTGCCCACTGCCCAGTACCAATGTCAATGCCACATGTTTTTGTTACCCTGACCATAAAAGTTaGGGAGTTTTGAAGGCTCTT +
Preference number: 5 (lower is better)
Translates to: SSFCPLPSTNVNATCFCYPDHKS*GVLKAL
Trigger: AAGAGCCTTCAAAACTCCCAAACTTTTATGGTCAGG...GTAACAAAAACATGTGGCATTGACATTGGTACTGGGCAGTGGGCAGAAACTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR CAA 90 bp TGTGAATCTAATGTAGCCGTATCTCTCAGTATATGCAGCCAAATAAACCATTTGTCCCATTTTGCAGGTTaGTCACGCTGCCTCCTGACC +
Preference number: 5 (lower is better)
Translates to: CESNVAVSLSICSQINHLSHFAG*SRCLLT
Trigger: GGTCAGGAGGCAGCGTGACAAACCTGCAAAATGGGA...CAAATGGTTTATTTGGCTGCATATACTGAGAGATACGGCTACATTAGATTCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR CAA 90 bp TGTTCCATTGATCTATTTCTACAGCAATCACACTGTCTTGATTACTGTAGCCATCTCAAACTCCATCCCTaGGCTCAGGTTTGCCCCTTT +
Preference number: 5 (lower is better)
Translates to: CSIDLFLQQSHCLDYCSHLKLHP*AQVCPF
Trigger: AAAGGGGCAAACCTGAGCCAAGGGATGGAGTTTGAG...ATGGCTACAGTAATCAAGACAGTGTGATTGCTGTAGAAATAGATCAATGGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR CAA 90 bp TCCAGTTTCTGCCCACTGCCCAGTACCAATGTCAATGCCACATGTTTTTGTTACAATCTTGCCAACAGGTaGAATTATGCAACAAGCAGA +
Preference number: 5 (lower is better)
Translates to: SSFCPLPSTNVNATCFCYNLANR*NYATSR
Trigger: TCTGCTTGTTGCATAATTCAACCTGTTGGCAAGATT...GTAACAAAAACATGTGGCATTGACATTGGTACTGGGCAGTGGGCAGAAACTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR CAA 90 bp CATTCCCACCAGCAGTGTATTAGAGTTCCAGTTGCTTCTCATCCTCACCATCACACTACCCCCATTATTTaGGTAATTATAGCAGTATGG +
Preference number: 5 (lower is better)
Translates to: HSHQQCIRVPVASHPHHHTTPII*VIIAVW
Trigger: CCATACTGCTATAATTACCAAAATAATGGGGGTAGT...GTGATGGTGAGGATGAGAAGCAACTGGAACTCTAATACACTGCTGGTGGGAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR CAA 90 bp TCCAGTTTCTGCCCACTGCCCAGTACCAATGTCAATGCCACATGTTTTTGTTACATTGCCTTGGTAACTTaGTTGAAAATCAGCTGTCCA +
Preference number: 5 (lower is better)
Translates to: SSFCPLPSTNVNATCFCYIALVT*LKISCP
Trigger: TGGACAGCTGATTTTCAACAAAGTTACCAAGGCAAT...GTAACAAAAACATGTGGCATTGACATTGGTACTGGGCAGTGGGCAGAAACTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR CAA 90 bp CATTCCCACCAGCAGTGTATTAGAGTTCCAGTTGCTTCTCATCCTCACCATCACAAGGCTCTTTTAATTTaGAACTCTGCCCTTTTTAGC +
Preference number: 5 (lower is better)
Translates to: HSHQQCIRVPVASHPHHHKALLI*NSALFS
Trigger: GCTAAAAAGGGCAGAGTTCAAAATTAAAAGAGCCTT...GTGATGGTGAGGATGAGAAGCAACTGGAACTCTAATACACTGCTGGTGGGAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR CAA 90 bp TCAACATGGATTACTAAATCTTGCCAACAGGTTGAATTATGCAACAAGCAGACAGAGATCACTTTCCTCTaGGCCAAGAAGTTCACCAGG +
Preference number: 5 (lower is better)
Translates to: STWITKSCQQVELCNKQTEITFL*AKKFTR
Trigger: CCTGGTGAACTTCTTGGCCAAGAGGAAAGTGATCTC...TGTCTGCTTGTTGCATAATTCAACCTGTTGGCAAGATTTAGTAATCCATGTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR CAA 90 bp TCCAGTTTCTGCCCACTGCCCAGTACCAATGTCAATGCCACATGTTTTTGTTACGTCAGACTTTCAACTTaGTTCTTTTTCAAAGTTGCG +
Preference number: 5 (lower is better)
Translates to: SSFCPLPSTNVNATCFCYVRLST*FFFKVA
Trigger: CGCAACTTTGAAAAAGAACAAAGTTGAAAGTCTGAC...GTAACAAAAACATGTGGCATTGACATTGGTACTGGGCAGTGGGCAGAAACTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR CAA 90 bp TGTTCCATTGATCTATTTCTACAGCAATCACACTGTCTTGATTACTGTAGCCATGTATTAGAGTTCCAGTaGCTTCTCATCCTCACCATC +
Preference number: 5 (lower is better)
Translates to: CSIDLFLQQSHCLDYCSHVLEFQ*LLILTI
Trigger: GATGGTGAGGATGAGAAGCAACTGGAACTCTAATAC...ATGGCTACAGTAATCAAGACAGTGTGATTGCTGTAGAAATAGATCAATGGAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR CAA 90 bp TCAACATGGATTACTAAATCTTGCCAACAGGTTGAATTATGCAACAAGCAGACAGTATTAGAGTTCCAGTaGCTTCTCATCCTCACCATC +
Preference number: 5 (lower is better)
Translates to: STWITKSCQQVELCNKQTVLEFQ*LLILTI
Trigger: GATGGTGAGGATGAGAAGCAACTGGAACTCTAATAC...TGTCTGCTTGTTGCATAATTCAACCTGTTGGCAAGATTTAGTAATCCATGTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR CAA 90 bp TCAACATGGATTACTAAATCTTGCCAACAGGTTGAATTATGCAACAAGCAGACACTGTCCACATTTTGTTaGTGGTCAAATTGTGGTCTC +
Preference number: 5 (lower is better)
Translates to: STWITKSCQQVELCNKQTLSTFC*WSNCGL
Trigger: GAGACCACAATTTGACCACAAACAAAATGTGGACAG...TGTCTGCTTGTTGCATAATTCAACCTGTTGGCAAGATTTAGTAATCCATGTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR CAA 90 bp TCAACATGGATTACTAAATCTTGCCAACAGGTTGAATTATGCAACAAGCAGACACCTGACCATAAAAGTTaGGGAGTTTTGAAGGCTCTT +
Preference number: 5 (lower is better)
Translates to: STWITKSCQQVELCNKQTPDHKS*GVLKAL
Trigger: AAGAGCCTTCAAAACTCCCAAACTTTTATGGTCAGG...TGTCTGCTTGTTGCATAATTCAACCTGTTGGCAAGATTTAGTAATCCATGTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR CAA 90 bp TGTTCCATTGATCTATTTCTACAGCAATCACACTGTCTTGATTACTGTAGCCATCAATGCCACATGTTTTaGTTACAAAAGCACTCCCAA +
Preference number: 5 (lower is better)
Translates to: CSIDLFLQQSHCLDYCSHQCHMF*LQKHSQ
Trigger: TTGGGAGTGCTTTTGTAACAAAAACATGTGGCATTG...ATGGCTACAGTAATCAAGACAGTGTGATTGCTGTAGAAATAGATCAATGGAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR CAA 90 bp TGTTCCATTGATCTATTTCTACAGCAATCACACTGTCTTGATTACTGTAGCCATTTCTGTATATCTTCTTaGGTGAAGTGGCTGTTCAAA +
Preference number: 5 (lower is better)
Translates to: CSIDLFLQQSHCLDYCSHFCISS*VKWLFK
Trigger: TTTGAACAGCCACTTCACCAAAGAAGATATACAGAA...ATGGCTACAGTAATCAAGACAGTGTGATTGCTGTAGAAATAGATCAATGGAACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS-3UTR CAA 90 bp TCAACATGGATTACTAAATCTTGCCAACAGGTTGAATTATGCAACAAGCAGACAAAGGCTCTTTTAATTTaGAACTCTGCCCTTTTTAGC +
Preference number: 5 (lower is better)
Translates to: STWITKSCQQVELCNKQTKALLI*NSALFS
Trigger: GCTAAAAAGGGCAGAGTTCAAAATTAAAAGAGCCTT...TGTCTGCTTGTTGCATAATTCAACCTGTTGGCAAGATTTAGTAATCCATGTTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641039.1
ENST00000641697.1
CDS CAA 90 bp GAGCTGGGGGTCAGTGGTGAGGCCCAAGAGCTCAAACTCCATCCCTaGGCTCAGGTTTGCCCCTTTCATCCTTCTCCAGTGCTCCGACTC +
Preference number: 6 (lower is better)
Translates to: ELGVSGEAQELKLHP*AQVCPFHPSPVLRL
Trigger: GAGTCGGAGCACTGGAGAAGGATGAAAGGGGCAAACCTGAGCCAAGGGATGGAGTTTGAGCTCTTGGGCCTCACCACTGACCCCCAGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641039.1
CDS CAA 90 bp GAGCTGGGGGTCAGTGGTGAGGCCCAAGAGCTCAAACTCCATCCCTaGGCTCAGGTTTGCCCCTTTCATCCTTCTCCAGTGCTCTGCGAT +
Preference number: 6 (lower is better)
Translates to: ELGVSGEAQELKLHP*AQVCPFHPSPVLCD
Trigger: ATCGCAGAGCACTGGAGAAGGATGAAAGGGGCAAACCTGAGCCAAGGGATGGAGTTTGAGCTCTTGGGCCTCACCACTGACCCCCAGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304418.5
ENST00000641822.1
CDS GCA 72 bp GCCCAAGAGCTCAAACTCCATCCCTTGGCTCAGGTTTaGCCCTTTCATCCTTCTCCAGTGCTCTGCGATGGA +
Preference number: 6 (lower is better)
Translates to: AQELKLHPLAQV*PFHPSPVLCDG
Trigger: TCCATCGCAGAGCACTGGAGAAGGATGAAAGGGGCAAACCTGAGCCAAGGGATGGAGTTTGAGCTCTTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304418.5
ENST00000641822.1
CDS CCA 72 bp TCAGTGGTGAGGCCCAAGAGCTCAAACTCCATCCCTTaGCTCAGGTTTGCCCCTTTCATCCTTCTCCAGTGC +
Preference number: 6 (lower is better)
Translates to: SVVRPKSSNSIP*LRFAPFILLQC
Trigger: GCACTGGAGAAGGATGAAAGGGGCAAACCTGAGCCAAGGGATGGAGTTTGAGCTCTTGGGCCTCACCACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304418.5
ENST00000641039.1
ENST00000641697.1
ENST00000641822.1
CDS GCA 72 bp GCCCAAGAGCTCAAACTCCATCCCTTGGCTCAGGTTTaGCCCTTTCATCCTTCTCCAGTGCTCCGACTCATT +
Preference number: 6 (lower is better)
Translates to: AQELKLHPLAQV*PFHPSPVLRLI
Trigger: AATGAGTCGGAGCACTGGAGAAGGATGAAAGGGGCAAACCTGAGCCAAGGGATGGAGTTTGAGCTCTTGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641039.1
CDS TCA 72 bp GGCACCACCATAAATGAGGTTGAACACCTGGGGCTCTaGCTGGGTTTAATTCTGCCTAAGGACAGCCTTCTG +
Preference number: 6 (lower is better)
Translates to: GTTINEVEHLGL*LGLILPKDSLL
Trigger: CAGAAGGCTGTCCTTAGGCAGAATTAAACCCAGTCAGAGCCCCAGGTGTTCAACCTCATTTATGGTGGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304418.5
ENST00000641822.1
CDS GCA 72 bp CCTTGGCTCAGGTTTGCCCCTTTCATCCTTCTCCAGTaGTCTGCGATGGAGAAAGAAGGCACCACCATAAAT +
Preference number: 6 (lower is better)
Translates to: PWLRFAPFILLQ*SAMEKEGTTIN
Trigger: ATTTATGGTGGTGCCTTCTTTCTCCATCGCAGAGCACTGGAGAAGGATGAAAGGGGCAAACCTGAGCCAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304418.5
ENST00000641822.1
CDS GCA 72 bp GATACAGCCAGTGTGGATAAGAGAATTGAGGAATCCTaGACTGTAGGAGCCCACAATCAGCGAGGCACAGAC +
Preference number: 6 (lower is better)
Translates to: DTASVDKRIEES*TVGAHNQRGTD
Trigger: GTCTGTGCCTCGCTGATTGTGGGCTCCTACAGTGCAGGATTCCTCAATTCTCTTATCCACACTGGCTGTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304418.5
ENST00000641039.1
ENST00000641697.1
ENST00000641822.1
CDS TCA 72 bp GAAACCAGCAAAAATGAAGAGCAGGATCTCACACAGTaGGGTGTCTACACAAGACAAGGACAGGATGGGTGG +
Preference number: 6 (lower is better)
Translates to: ETSKNEEQDLTQ*GVYTRQGQDGW
Trigger: CCACCCATCCTGTCCTTGTCTTGTGTAGACACCTCACTGTGTGAGATCCTGCTCTTCATTTTTGCTGGTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304418.5
ENST00000641039.1
ENST00000641697.1
ENST00000641822.1
CDS TCA 72 bp CATGTGCAGATTCCAGGTCCCAACCCACAGAAAATTTaGTCCAATAGGTCTATAGCTTGGCCCCAAAGTCTG +
Preference number: 6 (lower is better)
Translates to: HVQIPGPNPQKI*SNRSIAWPQSL
Trigger: CAGACTTTGGGGCCAAGCTATAGACCTATTGGATCAAATTTTCTGTGGGTTGGGACCTGGAATCTGCACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641039.1
CDS GCA 72 bp CCTTGCCCAAGGTTCACAGGAGAAGCTTGTTACATGTaGAGATTCCAGGTCCCAACCCACAGAAAATTTGAT +
Preference number: 6 (lower is better)
Translates to: PCPRFTGEACYM*RFQVPTHRKFD
Trigger: ATCAAATTTTCTGTGGGTTGGGACCTGGAATCTGCACATGTAACAAGCTTCTCCTGTGAACCTTGGGCAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641039.1