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Pregenerated sensors for OR5AS1 (Homo sapiens)

Ensembl gene IDs: ENSG00000181785

Ensembl transcript IDs: ENST00000641320.1

Found 260 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TTTAGAGATCCCCTGCCCAGAGAGGAGGAATCTAGAGAGGCAGTCTaGCTACAGAGGTTTTGCAGTGCTGCGGTGGGCTCCACCCAGTTC +
Preference number: 1 (lower is better)
Translates to: FRDPLPREEESREAV*LQRFCSAAVGSTQF
Trigger: GAACTGGGTGGAGCCCACCGCAGCACTGCAAAACCTCTGTAGCCAGACTGCCTCTCTAGATTCCTCCTCTCTGGGCAGGGGATCTCTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR GCA 90 bp TTCCTTTTAATTGTCAGGCCCCTCTGCTGCAGGTCTGCTGGAGTTTaGTGGAGATCCACTCCAGACCCTGTTTGCCTGCGAAGGCTGCAG +
Preference number: 1 (lower is better)
Translates to: FLLIVRPLCCRSAGV*WRSTPDPVCLRRLQ
Trigger: CTGCAGCCTTCGCAGGCAAACAGGGTCTGGAGTGGATCTCCAGCAAACTCCAGCAGACCTGCAGCAGAGGGGCCTGACAATTAAAAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR GCA 90 bp GGTCTGCTGGAGTTTGCTGGAGATCCACTCCAGACCCTGTTTGCCTaGGAAGGCTGCAGAACAGTAAAGATTGCTGCCCGTTCCTTCCTT +
Preference number: 1 (lower is better)
Translates to: GLLEFAGDPLQTLFA*EGCRTVKIAARSFL
Trigger: AAGGAAGGAACGGGCAGCAATCTTTACTGTTCTGCAGCCTTCGCAGGCAAACAGGGTCTGGAGTGGATCTCCAGCAAACTCCAGCAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR GCA 90 bp TGCAGGTCTGCTGGAGTTTGCTGGAGATCCACTCCAGACCCTGTTTaGCTGCGAAGGCTGCAGAACAGTAAAGATTGCTGCCCGTTCCTT +
Preference number: 1 (lower is better)
Translates to: CRSAGVCWRSTPDPV*LRRLQNSKDCCPFL
Trigger: AAGGAACGGGCAGCAATCTTTACTGTTCTGCAGCCTTCGCAGGCAAACAGGGTCTGGAGTGGATCTCCAGCAAACTCCAGCAGACCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR TCA 90 bp TGGGCTCCACCCAGTTCAAACTTCCTGGCAGCTTTGTTTACACTATaGGGGGAAAACTGCCTACTGAAGCCTCAGCAATGGCGGACTCTC +
Preference number: 1 (lower is better)
Translates to: WAPPSSNFLAALFTL*GENCLLKPQQWRTL
Trigger: GAGAGTCCGCCATTGCTGAGGCTTCAGTAGGCAGTTTTCCCCTCATAGTGTAAACAAAGCTGCCAGGAAGTTTGAACTGGGTGGAGCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR GCA 90 bp CGTTCCTTCCTTTGGAAGCTTCATCCTAGAGGCACACCTGTGAGATaGCAGCTGGAGCTCTCTCCTATGAGGTATCTGTCAACCCCTACT +
Preference number: 1 (lower is better)
Translates to: RSFLWKLHPRGTPVR*QLELSPMRYLSTPT
Trigger: AGTAGGGGTTGACAGATACCTCATAGGAGAGAGCTCCAGCTGGCATCTCACAGGTGTGCCTCTAGGATGAAGCTTCCAAAGGAAGGAACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR CCA 90 bp AGAAATCACCCACCTTCTCTGTTGATCTTGCTGGGAGCAGCAGACTaGAGCATCTCCTATTTGACCATCTTGCCAGCCACCAAACATAAC +
Preference number: 1 (lower is better)
Translates to: RNHPPSLLILLGAAD*SISYLTILPATKHN
Trigger: GTTATGTTTGGTGGCTGGCAAGATGGTCAAATAGGAGATGCTCCAGTCTGCTGCTCCCAGCAAGATCAACAGAGAAGGTGGGTGATTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR TCA 90 bp ATATTCCTCCATCCCGTTATTTTGAGCCTATGTATGCTTTGCACATaGGATCGGTCTCCTGAATACAGCACACCAATCGGTCTTGACTCT +
Preference number: 1 (lower is better)
Translates to: IFLHPVILSLCMLCT*DRSPEYSTPIGLDS
Trigger: AGAGTCAAGACCGATTGGTGTGCTGTATTCAGGAGACCGATCTCATGTGCAAAGCATACATAGGCTCAAAATAACGGGATGGAGGAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR GCA 90 bp TTCCATCAATTCATCAAACTCATTCTCTGTCCAGTTTTGTTTCCTTaGTGGCGTGGAATTGTGATCCTTTGTGGGAGAAGAGATGTCTGG +
Preference number: 1 (lower is better)
Translates to: FHQFIKLILCPVLFP*WRGIVILCGRRDVW
Trigger: CCAGACATCTCTTCTCCCACAAAGGATCACAATTCCACGCCAGCAAGGAAACAAAACTGGACAGAGAATGAGTTTGATGAATTGATGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR TCA 90 bp TTACTGCCTCAATTTTGGGACTTGTTTTTGGTCTATTCATGGATTTaGCTTCTTCCTGGATTAGACTTGGGAGGGTGTGTGTTTCCAGGA +
Preference number: 1 (lower is better)
Translates to: LLPQFWDLFLVYSWI*LLPGLDLGGCVFPG
Trigger: TCCTGGAAACACACACCCTCCCAAGTCTAATCCAGGAAGAAGTCAAATCCATGAATAGACCAAAAACAAGTCCCAAAATTGAGGCAGTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR TCA 90 bp TGTGCTTTTGTCATTGGTTCTGTTTATGAGATGGGTTACGTTTATTaGTTTGCGTATGTTAAGCCAGCCTTGCATCCCAGGGATAAAGCC +
Preference number: 1 (lower is better)
Translates to: CAFVIGSVYEMGYVY*FAYVKPALHPRDKA
Trigger: GGCTTTATCCCTGGGATGCAAGGCTGGCTTAACATACGCAAATCAATAAACGTAACCCATCTCATAAACAGAACCAATGACAAAAGCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR TCA 90 bp TGCCGGTTTTCAAAGGGAATGCGTCCAGTTTTTGCCCATTCAGTATaGTATTGGCTGTGGGTTTGTCATAATAGCTCTTATTATTTGGAG +
Preference number: 1 (lower is better)
Translates to: CRFSKGMRPVFAHSV*YWLWVCHNSSYYLE
Trigger: CTCCAAATAATAAGAGCTATTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGACGCATTCCCTTTGAAAACCGGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR GCA 90 bp TATCCTTCCTTCTGTTTGATCGATTTGGCTATTGATGCTTGTGTATaGTTCATGAAGTTCTCGTGCTGTGTTTTTCAGCTCCATCAGGTT +
Preference number: 1 (lower is better)
Translates to: YPSFCLIDLAIDACV*FMKFSCCVFQLHQV
Trigger: AACCTGATGGAGCTGAAAAACACAGCACGAGAACTTCATGAAGCATACACAAGCATCAATAGCCAAATCGATCAAACAGAAGGAAGGATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR CCA 90 bp CTTTTTGCATTGGTTTTTCCTCACCATCATGCATTTATCTACCTTTaGTCTTTGATGTTGGTGGTGGAGTTTCTGAGTGGACGTCCTTTT +
Preference number: 1 (lower is better)
Translates to: LFALVFPHHHAFIYL*SLMLVVEFLSGRPF
Trigger: AAAAGGACGTCCACTCAGAAACTCCACCACCAACATCAAAGACCAAAGGTAGATAAATGCATGATGGTGAGGAAAAACCAATGCAAAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR CCA 90 bp ATTCATCAAACTCATTCTCTGTCCAGTTTTGTTTCCTTGCTGGCGTaGAATTGTGATCCTTTGTGGGAGAAGAGATGTCTGGTTTTAGAA +
Preference number: 1 (lower is better)
Translates to: IHQTHSLSSFVSLLA*NCDPLWEKRCLVLE
Trigger: TTCTAAAACCAGACATCTCTTCTCCCACAAAGGATCACAATTCCACGCCAGCAAGGAAACAAAACTGGACAGAGAATGAGTTTGATGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR TCA 90 bp AGCAATTCCTCTAACCATTTTTCGAGGTTCTTAGCTTCTTTGCATTaGGTTAGGACATGCTCCTTTAGCTCAGAGGAGTTTGATATTACC +
Preference number: 1 (lower is better)
Translates to: SNSSNHFSRFLASLH*VRTCSFSSEEFDIT
Trigger: GGTAATATCAAACTCCTCTGAGCTAAAGGAGCATGTCCTAACTCAATGCAAAGAAGCTAAGAACCTCGAAAAATGGTTAGAGGAATTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR TCA 90 bp TTTGCTATCCATTTGCTTGGTAAATATTCCTCCATCCCGTTATTTTaGGCCTATGTATGCTTTGCACATGAGATCGGTCTCCTGAATACA +
Preference number: 1 (lower is better)
Translates to: FAIHLLGKYSSIPLF*AYVCFAHEIGLLNT
Trigger: TGTATTCAGGAGACCGATCTCATGTGCAAAGCATACATAGGCTCAAAATAACGGGATGGAGGAATATTTACCAAGCAAATGGATAGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR CCA 90 bp TGTGATGTTAGGGTGTTGATTTTAGATCTTTCCTGCTTTCTCTTGTaGGCCTTTAGTACTGTGAATTTTCCTCTAAACACTGCTTTAGCT +
Preference number: 1 (lower is better)
Translates to: CDVRVLILDLSCFLL*AFSTVNFPLNTALA
Trigger: AGCTAAAGCAGTGTTTAGAGGAAAATTCACAGTACTAAAGGCCCACAAGAGAAAGCAGGAAAGATCTAAAATCAACACCCTAACATCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR GCA 90 bp ATCGATTTGGCTATTGATGCTTGTGTATGCTTCATGAAGTTCTCGTaGTGTGTTTTTCAGCTCCATCAGGTTATTTATGTTCTCTTCAAA +
Preference number: 1 (lower is better)
Translates to: IDLAIDACVCFMKFS*CVFQLHQVIYVLFK
Trigger: TTTGAAGAGAACATAAATAACCTGATGGAGCTGAAAAACACAGCACGAGAACTTCATGAAGCATACACAAGCATCAATAGCCAAATCGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR CAA 90 bp CCAGAGTGCACCCGTTCCTCATGGCACAGTCCTTCATGGCTTCCCTaGGCTAGTGGAGGGAGTTTGCCAACCCTTTGTGCTTCCCGGGTG +
Preference number: 2 (lower is better)
Translates to: PECTRSSWHSPSWLP*ASGGSLPTLCASRV
Trigger: CACCCGGGAAGCACAAAGGGTTGGCAAACTCCCTCCACTAGCCAAGGGAAGCCATGAAGGACTGTGCCATGAGGAACGGGTGCACTCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR-3UTR CCA 90 bp AGTTTGCCAACCCTTTGTGCTTCCCGGGTGAAGCAACACCCCACCCTGCTTCTGCTGGGAGCAGCAGACTaGAGCATCTCCTATTTGACC +
Preference number: 2 (lower is better)
Translates to: SLPTLCASRVKQHPTLLLLGAAD*SISYLT
Trigger: GGTCAAATAGGAGATGCTCCAGTCTGCTGCTCCCAG...CAGAAGCAGGGTGGGGTGTTGCTTCACCCGGGAAGCACAAAGGGTTGGCAAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR-3UTR CCA 90 bp TGCCACTGGGGTATGAAGAAAACTCCTGCAGCTAGCTCAGTGCCTGCCCAAACAGAAAAGCATAGTATCTaGGCCAGAGTGCACCCGTTC +
Preference number: 2 (lower is better)
Translates to: CHWGMKKTPAASSVPAQTEKHSI*ARVHPF
Trigger: GAACGGGTGCACTCTGGCCCAGATACTATGCTTTTC...TGTTTGGGCAGGCACTGAGCTAGCTGCAGGAGTTTTCTTCATACCCCAGTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR-3UTR TCA 90 bp GACTCTATCCAATTTGCCAGTCTGTGGCTTTTAACTGGGGCTTTCAGCCCATTTCTAGAGGCACACCTGTaGGATGCCAGCTGGAGCTCT +
Preference number: 2 (lower is better)
Translates to: DSIQFASLWLLTGAFSPFLEAHL*DASWSS
Trigger: AGAGCTCCAGCTGGCATCTCACAGGTGTGCCTCTAG...AAATGGGCTGAAAGCCCCAGTTAAAAGCCACAGACTGGCAAATTGGATAGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR-3UTR GCA 90 bp AGTTTGCCAACCCTTTGTGCTTCCCGGGTGAAGCAACACCCCACCCTGCTTCTGTACCTCAGTTGGAAATaGAGAAATCACCCACCTTCT +
Preference number: 2 (lower is better)
Translates to: SLPTLCASRVKQHPTLLLYLSWK*RNHPPS
Trigger: AGAAGGTGGGTGATTTCTGCATTTCCAACTGAGGTA...CAGAAGCAGGGTGGGGTGTTGCTTCACCCGGGAAGCACAAAGGGTTGGCAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR-3UTR GCA 90 bp GACTCTATCCAATTTGCCAGTCTGTGGCTTTTAACTGGGGCTTTCAGCCCATTTCAGTGGATCTTAGCTTaGTGGGCTCCATGGGGGTGG +
Preference number: 2 (lower is better)
Translates to: DSIQFASLWLLTGAFSPFQWILA*WAPWGW
Trigger: CCACCCCCATGGAGCCCAGCAAGCTAAGATCCACTG...AAATGGGCTGAAAGCCCCAGTTAAAAGCCACAGACTGGCAAATTGGATAGAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR CAA 90 bp TACCTCAGTTGGAAATGCAGAAATCACCCACCTTCTCTGTTGATCTaGCTGGGAGCAGCAGACTGGAGCATCTCCTATTTGACCATCTTG +
Preference number: 2 (lower is better)
Translates to: YLSWKCRNHPPSLLI*LGAADWSISYLTIL
Trigger: CAAGATGGTCAAATAGGAGATGCTCCAGTCTGCTGCTCCCAGCAAGATCAACAGAGAAGGTGGGTGATTTCTGCATTTCCAACTGAGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR-3UTR TCA 90 bp GACTCTATCCAATTTGCCAGTCTGTGGCTTTTAACTGGGGCTTTCAGCCCATTTGGTCAAGGACCCACTTaGTGCAGGAGTCTATCTCTT +
Preference number: 2 (lower is better)
Translates to: DSIQFASLWLLTGAFSPFGQGPT*CRSLSL
Trigger: AAGAGATAGACTCCTGCATCAAGTGGGTCCTTGACC...AAATGGGCTGAAAGCCCCAGTTAAAAGCCACAGACTGGCAAATTGGATAGAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR-3UTR GCA 90 bp GTTCTCGTGCTGTGTTTTTCAGCTCCATCAGGTTATTTATGTTCTCTTCAAACCAGCAACACCCCACCCTaGTTCTGCTCACCCACCATG +
Preference number: 2 (lower is better)
Translates to: VLVLCFSAPSGYLCSLQTSNTPP*FCSPTM
Trigger: CATGGTGGGTGAGCAGAAGCAGGGTGGGGTGTTGCT...GGTTTGAAGAGAACATAAATAACCTGATGGAGCTGAAAAACACAGCACGAGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR-3UTR TCA 90 bp GTTCTCGTGCTGTGTTTTTCAGCTCCATCAGGTTATTTATGTTCTCTTCAAACCACCCACCTTCTCTGTTaGTCTTGCTGGGAGCAGCAG +
Preference number: 2 (lower is better)
Translates to: VLVLCFSAPSGYLCSLQTTHLLC*SCWEQQ
Trigger: CTGCTGCTCCCAGCAAGATCAACAGAGAAGGTGGGT...GGTTTGAAGAGAACATAAATAACCTGATGGAGCTGAAAAACACAGCACGAGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR-3UTR TCA 90 bp GACTCTATCCAATTTGCCAGTCTGTGGCTTTTAACTGGGGCTTTCAGCCCATTTTCTACCTTTGGTCTTTaGTGTTGGTGGTGGAGTTTC +
Preference number: 2 (lower is better)
Translates to: DSIQFASLWLLTGAFSPFSTFGL*CWWWSF
Trigger: GAAACTCCACCACCAACATCAAAGACCAAAGGTAGA...AAATGGGCTGAAAGCCCCAGTTAAAAGCCACAGACTGGCAAATTGGATAGAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR-3UTR CCA 90 bp TGCCACTGGGGTATGAAGAAAACTCCTGCAGCTAGCTCAGTGCCTGCCCAAACAAACTCTATGCATAAATaGCCTAAACACACAGATAAG +
Preference number: 2 (lower is better)
Translates to: CHWGMKKTPAASSVPAQTNSMHK*PKHTDK
Trigger: CTTATCTGTGTGTTTAGGCCATTTATGCATAGAGTT...TGTTTGGGCAGGCACTGAGCTAGCTGCAGGAGTTTTCTTCATACCCCAGTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR-3UTR GCA 90 bp GACTCTATCCAATTTGCCAGTCTGTGGCTTTTAACTGGGGCTTTCAGCCCATTTTCAGACTGCTATGCTTaGAGGAAGAATTTCAAGCCA +
Preference number: 2 (lower is better)
Translates to: DSIQFASLWLLTGAFSPFSDCYA*RKNFKP
Trigger: TGGCTTGAAATTCTTCCTGCAAGCATAGCAGTCTGA...AAATGGGCTGAAAGCCCCAGTTAAAAGCCACAGACTGGCAAATTGGATAGAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR CAA 90 bp CTTCCATCAATTCATCAAACTCATTCTCTGTCCAGTTTTGTTTCCTaGCTGGCGTGGAATTGTGATCCTTTGTGGGAGAAGAGATGTCTG +
Preference number: 2 (lower is better)
Translates to: LPSIHQTHSLSSFVS*LAWNCDPLWEKRCL
Trigger: CAGACATCTCTTCTCCCACAAAGGATCACAATTCCACGCCAGCAAGGAAACAAAACTGGACAGAGAATGAGTTTGATGAATTGATGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR-3UTR TCA 90 bp AATTACTTCCATCAATTCATCAAACTCATTCTCTGTCCAGTTTTGTTTCCTTGCGGGAAAACTGCCTACTaGAGCCTCAGCAATGGCGGA +
Preference number: 2 (lower is better)
Translates to: NYFHQFIKLILCPVLFPCGKTAY*SLSNGG
Trigger: TCCGCCATTGCTGAGGCTTCAGTAGGCAGTTTTCCC...GCAAGGAAACAAAACTGGACAGAGAATGAGTTTGATGAATTGATGGAAGTAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR-3UTR TCA 90 bp GACTCTATCCAATTTGCCAGTCTGTGGCTTTTAACTGGGGCTTTCAGCCCATTTGATCGATTTGGCTATTaGTGCTTGTGTATGCTTCAT +
Preference number: 2 (lower is better)
Translates to: DSIQFASLWLLTGAFSPFDRFGY*CLCMLH
Trigger: ATGAAGCATACACAAGCATCAATAGCCAAATCGATC...AAATGGGCTGAAAGCCCCAGTTAAAAGCCACAGACTGGCAAATTGGATAGAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR-3UTR GCA 90 bp GACTCTATCCAATTTGCCAGTCTGTGGCTTTTAACTGGGGCTTTCAGCCCATTTATTGATGCTTGTGTATaGTTCATGAAGTTCTCGTGC +
Preference number: 2 (lower is better)
Translates to: DSIQFASLWLLTGAFSPFIDACV*FMKFSC
Trigger: GCACGAGAACTTCATGAAGCATACACAAGCATCAAT...AAATGGGCTGAAAGCCCCAGTTAAAAGCCACAGACTGGCAAATTGGATAGAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR-3UTR CCA 90 bp GACTCTATCCAATTTGCCAGTCTGTGGCTTTTAACTGGGGCTTTCAGCCCATTTCCAGTTCAAACTTCCTaGCAGCTTTGTTTACACTAT +
Preference number: 2 (lower is better)
Translates to: DSIQFASLWLLTGAFSPFPVQTS*QLCLHY
Trigger: ATAGTGTAAACAAAGCTGCCAGGAAGTTTGAACTGG...AAATGGGCTGAAAGCCCCAGTTAAAAGCCACAGACTGGCAAATTGGATAGAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR-3UTR CCA 90 bp GACTCTATCCAATTTGCCAGTCTGTGGCTTTTAACTGGGGCTTTCAGCCCATTTTCAGCCTTTTTGCATTaGTTTTTCCTCACCATCATG +
Preference number: 2 (lower is better)
Translates to: DSIQFASLWLLTGAFSPFSAFLH*FFLTIM
Trigger: CATGATGGTGAGGAAAAACCAATGCAAAAAGGCTGA...AAATGGGCTGAAAGCCCCAGTTAAAAGCCACAGACTGGCAAATTGGATAGAGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR-3UTR CCA 90 bp GTTCTCGTGCTGTGTTTTTCAGCTCCATCAGGTTATTTATGTTCTCTTCAAACCGTTTCCTTGCTGGCGTaGAATTGTGATCCTTTGTGG +
Preference number: 2 (lower is better)
Translates to: VLVLCFSAPSGYLCSLQTVSLLA*NCDPLW
Trigger: CCACAAAGGATCACAATTCCACGCCAGCAAGGAAAC...GGTTTGAAGAGAACATAAATAACCTGATGGAGCTGAAAAACACAGCACGAGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR CAA 90 bp CCCAATTACTTCCATCAATTCATCAAACTCATTCTCTGTCCAGTTTaGTTTCCTTGCTGGCGTGGAATTGTGATCCTTTGTGGGAGAAGA +
Preference number: 2 (lower is better)
Translates to: PNYFHQFIKLILCPV*FPCWRGIVILCGRR
Trigger: TCTTCTCCCACAAAGGATCACAATTCCACGCCAGCAAGGAAACAAAACTGGACAGAGAATGAGTTTGATGAATTGATGGAAGTAATTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR CAA 90 bp ATTACTGCCTCAATTTTGGGACTTGTTTTTGGTCTATTCATGGATTaGACTTCTTCCTGGATTAGACTTGGGAGGGTGTGTGTTTCCAGG +
Preference number: 2 (lower is better)
Translates to: ITASILGLVFGLFMD*TSSWIRLGRVCVSR
Trigger: CCTGGAAACACACACCCTCCCAAGTCTAATCCAGGAAGAAGTCAAATCCATGAATAGACCAAAAACAAGTCCCAAAATTGAGGCAGTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR-3UTR GCA 90 bp AGGTACCTCAGTTGGAAATGCAGAAATCACCCACCTTCTCTGTTGATCTTGCTGAATATACACATGCTCTaGTGCCAAGTAGCTTCTAAT +
Preference number: 2 (lower is better)
Translates to: RYLSWKCRNHPPSLLILLNIHML*CQVASN
Trigger: ATTAGAAGCTACTTGGCAGCAGAGCATGTGTATATT...CAGCAAGATCAACAGAGAAGGTGGGTGATTTCTGCATTTCCAACTGAGGTACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR-3UTR GCA 90 bp AGGTACCTCAGTTGGAAATGCAGAAATCACCCACCTTCTCTGTTGATCTTGCTGTGTGTGACACTTTACTaGGTCAGTTGCTTTATTGTA +
Preference number: 2 (lower is better)
Translates to: RYLSWKCRNHPPSLLILLCVTLY*VSCFIV
Trigger: TACAATAAAGCAACTGACGCAGTAAAGTGTCACACA...CAGCAAGATCAACAGAGAAGGTGGGTGATTTCTGCATTTCCAACTGAGGTACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR-3UTR GCA 90 bp GTTCTCGTGCTGTGTTTTTCAGCTCCATCAGGTTATTTATGTTCTCTTCAAACCTTTTTAGAGATCCCCTaGCCAGAGAGGAGGAATCTA +
Preference number: 2 (lower is better)
Translates to: VLVLCFSAPSGYLCSLQTFLEIP*PERRNL
Trigger: TAGATTCCTCCTCTCTGGGCAGGGGATCTCTAAAAA...GGTTTGAAGAGAACATAAATAACCTGATGGAGCTGAAAAACACAGCACGAGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR-3UTR TCA 90 bp CTTCTTTGCATTGAGTTAGGACATGCTCCTTTAGCTCAGAGGAGTTTGATATTATTTCTTGAGAACCAGTaGAACCACCATCAGTATCCC +
Preference number: 2 (lower is better)
Translates to: LLCIELGHAPLAQRSLILFLENQ*NHHQYP
Trigger: GGGATACTGATGGTGGTTTCACTGGTTCTCAAGAAA...TAATATCAAACTCCTCTGAGCTAAAGGAGCATGTCCTAACTCAATGCAAAGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR-3UTR GCA 90 bp GTTCTCGTGCTGTGTTTTTCAGCTCCATCAGGTTATTTATGTTCTCTTCAAACCATACACATGCTCTGCTaGCAAGTAGCTTCTAATACC +
Preference number: 2 (lower is better)
Translates to: VLVLCFSAPSGYLCSLQTIHMLC*QVASNT
Trigger: GGTATTAGAAGCTACTTGGCAGCAGAGCATGTGTAT...GGTTTGAAGAGAACATAAATAACCTGATGGAGCTGAAAAACACAGCACGAGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR-3UTR GCA 90 bp CTTCTTTGCATTGAGTTAGGACATGCTCCTTTAGCTCAGAGGAGTTTGATATTAATGCAGTATACCAGGTaGCAAACAGGTGGTGGAAAA +
Preference number: 2 (lower is better)
Translates to: LLCIELGHAPLAQRSLILMQYTR*QTGGGK
Trigger: TTTTCCACCACCTGTTTGGCACCTGGTATACTGCAT...TAATATCAAACTCCTCTGAGCTAAAGGAGCATGTCCTAACTCAATGCAAAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR-3UTR GCA 90 bp AGGTACCTCAGTTGGAAATGCAGAAATCACCCACCTTCTCTGTTGATCTTGCTGATCCATTTCATTAGGTaGTATCTTATTGTCTCCATG +
Preference number: 2 (lower is better)
Translates to: RYLSWKCRNHPPSLLILLIHFIR*YLIVSM
Trigger: CATGGAGACAATAAGATAGCACCTAATGAAATGGAT...CAGCAAGATCAACAGAGAAGGTGGGTGATTTCTGCATTTCCAACTGAGGTACCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR CAA 90 bp CTTTTGTCATTGGTTCTGTTTATGAGATGGGTTACGTTTATTGATTaGCGTATGTTAAGCCAGCCTTGCATCCCAGGGATAAAGCCAATT +
Preference number: 2 (lower is better)
Translates to: LLSLVLFMRWVTFID*RMLSQPCIPGIKPI
Trigger: AATTGGCTTTATCCCTGGGATGCAAGGCTGGCTTAACATACGCAAATCAATAAACGTAACCCATCTCATAAACAGAACCAATGACAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR-3UTR CCA 90 bp AATTACTTCCATCAATTCATCAAACTCATTCTCTGTCCAGTTTTGTTTCCTTGCTCTAGAGAGGCAGTCTaGCTACAGAGGTTTTGCAGT +
Preference number: 2 (lower is better)
Translates to: NYFHQFIKLILCPVLFPCSREAV*LQRFCS
Trigger: ACTGCAAAACCTCTGTAGCCAGACTGCCTCTCTAGA...GCAAGGAAACAAAACTGGACAGAGAATGAGTTTGATGAATTGATGGAAGTAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR-3UTR CCA 90 bp CTTCTTTGCATTGAGTTAGGACATGCTCCTTTAGCTCAGAGGAGTTTGATATTAGTTTTGTTTCCTTGCTaGCGTGGAATTGTGATCCTT +
Preference number: 2 (lower is better)
Translates to: LLCIELGHAPLAQRSLILVLFPC*RGIVIL
Trigger: AAGGATCACAATTCCACGCCAGCAAGGAAACAAAAC...TAATATCAAACTCCTCTGAGCTAAAGGAGCATGTCCTAACTCAATGCAAAGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR CAA 90 bp TGCACTGAGAAATCTAAAAATTTGTGTGACACTTTACTGCGTCAGTaGCTTTATTGTAGTGATCTAGAAGAGAACCCACAGTATCTTCAT +
Preference number: 2 (lower is better)
Translates to: CTEKSKNLCDTLLRQ*LYCSDLEENPQYLH
Trigger: ATGAAGATACTGTGGGTTCTCTTCTAGATCACTACAATAAAGCAACTGACGCAGTAAAGTGTCACACAAATTTTTAGATTTCTCAGTGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR CAA 90 bp AATTGTGATGTTAGGGTGTTGATTTTAGATCTTTCCTGCTTTCTCTaGTGGGCCTTTAGTACTGTGAATTTTCCTCTAAACACTGCTTTA +
Preference number: 2 (lower is better)
Translates to: NCDVRVLILDLSCFL*WAFSTVNFPLNTAL
Trigger: TAAAGCAGTGTTTAGAGGAAAATTCACAGTACTAAAGGCCCACAAGAGAAAGCAGGAAAGATCTAAAATCAACACCCTAACATCACAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR-3UTR TCA 90 bp AATTACTTCCATCAATTCATCAAACTCATTCTCTGTCCAGTTTTGTTTCCTTGCAGCCCAAAGACAATGTaGTGTATCTTCATTCTGACT +
Preference number: 2 (lower is better)
Translates to: NYFHQFIKLILCPVLFPCSPKTM*CIFILT
Trigger: AGTCAGAATGAAGATACATCACATTGTCTTTGGGCT...GCAAGGAAACAAAACTGGACAGAGAATGAGTTTGATGAATTGATGGAAGTAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR CAA 90 bp CAGCCACCAAACATAACTATGATATGCACTGAGAAATCTAAAAATTaGTGTGACACTTTACTGCGTCAGTTGCTTTATTGTAGTGATCTA +
Preference number: 2 (lower is better)
Translates to: QPPNITMICTEKSKN*CDTLLRQLLYCSDL
Trigger: TAGATCACTACAATAAAGCAACTGACGCAGTAAAGTGTCACACAAATTTTTAGATTTCTCAGTGCATATCATAGTTATGTTTGGTGGCTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR-3UTR GCA 90 bp AATTACTTCCATCAATTCATCAAACTCATTCTCTGTCCAGTTTTGTTTCCTTGCAACTTCAGACTGCTATaGTTGCAGGAAGAATTTCAA +
Preference number: 2 (lower is better)
Translates to: NYFHQFIKLILCPVLFPCNFRLL*LQEEFQ
Trigger: TTGAAATTCTTCCTGCAAGCATAGCAGTCTGAAGTT...GCAAGGAAACAAAACTGGACAGAGAATGAGTTTGATGAATTGATGGAAGTAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR CCA 72 bp CCAGAGTGCACCCGTTCCTCATGGCACAGTCCTTCATaGCTTCCCTTGGCTAGTGGAGGGAGTTTGCCAACC +
Preference number: 3 (lower is better)
Translates to: PECTRSSWHSPS*LPLASGGSLPT
Trigger: GGTTGGCAAACTCCCTCCACTAGCCAAGGGAAGCCATGAAGGACTGTGCCATGAGGAACGGGTGCACTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR CCA 72 bp CCCGTTCCTCATGGCACAGTCCTTCATGGCTTCCCTTaGCTAGTGGAGGGAGTTTGCCAACCCTTTGTGCTT +
Preference number: 3 (lower is better)
Translates to: PVPHGTVLHGFP*LVEGVCQPFVL
Trigger: AAGCACAAAGGGTTGGCAAACTCCCTCCACTAGCCAAGGGAAGCCATGAAGGACTGTGCCATGAGGAACGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR CCA 72 bp AGCATAGTATCTGGGCCAGAGTGCACCCGTTCCTCATaGCACAGTCCTTCATGGCTTCCCTTGGCTAGTGGA +
Preference number: 3 (lower is better)
Translates to: SIVSGPECTRSS*HSPSWLPLASG
Trigger: TCCACTAGCCAAGGGAAGCCATGAAGGACTGTGCCATGAGGAACGGGTGCACTCTGGCCCAGATACTATGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR GCA 72 bp GAGGAATCTAGAGAGGCAGTCTGGCTACAGAGGTTTTaGAGTGCTGCGGTGGGCTCCACCCAGTTCAAACTT +
Preference number: 3 (lower is better)
Translates to: EESREAVWLQRF*SAAVGSTQFKL
Trigger: AAGTTTGAACTGGGTGGAGCCCACCGCAGCACTGCAAAACCTCTGTAGCCAGACTGCCTCTCTAGATTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR GCA 72 bp GAGTTTGCTGGAGATCCACTCCAGACCCTGTTTGCCTaGGAAGGCTGCAGAACAGTAAAGATTGCTGCCCGT +
Preference number: 3 (lower is better)
Translates to: EFAGDPLQTLFA*EGCRTVKIAAR
Trigger: ACGGGCAGCAATCTTTACTGTTCTGCAGCCTTCGCAGGCAAACAGGGTCTGGAGTGGATCTCCAGCAAACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR GCA 72 bp GCTGGAGTTTGCTGGAGATCCACTCCAGACCCTGTTTaGCTGCGAAGGCTGCAGAACAGTAAAGATTGCTGC +
Preference number: 3 (lower is better)
Translates to: AGVCWRSTPDPV*LRRLQNSKDCC
Trigger: GCAGCAATCTTTACTGTTCTGCAGCCTTCGCAGGCAAACAGGGTCTGGAGTGGATCTCCAGCAAACTCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR CCA 72 bp CCACCTTCTCTGTTGATCTTGCTGGGAGCAGCAGACTaGAGCATCTCCTATTTGACCATCTTGCCAGCCACC +
Preference number: 3 (lower is better)
Translates to: PPSLLILLGAAD*SISYLTILPAT
Trigger: GGTGGCTGGCAAGATGGTCAAATAGGAGATGCTCCAGTCTGCTGCTCCCAGCAAGATCAACAGAGAAGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR-3UTR CAA 90 bp TGCCACTGGGGTATGAAGAAAACTCCTGCAGCTAGCTCAGTGCCTGCCCAAACATGGAGCATCTCCTATTaGACCATCTTGCCAGCCACC +
Preference number: 3 (lower is better)
Translates to: CHWGMKKTPAASSVPAQTWSISY*TILPAT
Trigger: GGTGGCTGGCAAGATGGTCAAATAGGAGATGCTCCA...TGTTTGGGCAGGCACTGAGCTAGCTGCAGGAGTTTTCTTCATACCCCAGTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR GCA 72 bp GAAGACGATGGGAAAAGCATAGTATCTGGGCCAGAGTaGACCCGTTCCTCATGGCACAGTCCTTCATGGCTT +
Preference number: 3 (lower is better)
Translates to: EDDGKSIVSGPE*TRSSWHSPSWL
Trigger: AAGCCATGAAGGACTGTGCCATGAGGAACGGGTGCACTCTGGCCCAGATACTATGCTTTTCCCATCGTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR GCA 72 bp TTTCCTTTTAATTGTCAGGCCCCTCTGCTGCAGGTCTaGTGGAGTTTGCTGGAGATCCACTCCAGACCCTGT +
Preference number: 3 (lower is better)
Translates to: FPFNCQAPLLQV*WSLLEIHSRPC
Trigger: ACAGGGTCTGGAGTGGATCTCCAGCAAACTCCAGCAGACCTGCAGCAGAGGGGCCTGACAATTAAAAGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR TCA 72 bp CAGCTTTGTTTACACTATGAGGGGAAAACTGCCTACTaGAGCCTCAGCAATGGCGGACTCTCCTCCTCCAAC +
Preference number: 3 (lower is better)
Translates to: QLCLHYEGKTAY*SLSNGGLSSSN
Trigger: GTTGGAGGAGGAGAGTCCGCCATTGCTGAGGCTTCAGTAGGCAGTTTTCCCCTCATAGTGTAAACAAAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR GCA 72 bp CTTTGGAAGCTTCATCCTAGAGGCACACCTGTGAGATaGCAGCTGGAGCTCTCTCCTATGAGGTATCTGTCA +
Preference number: 3 (lower is better)
Translates to: LWKLHPRGTPVR*QLELSPMRYLS
Trigger: TGACAGATACCTCATAGGAGAGAGCTCCAGCTGGCATCTCACAGGTGTGCCTCTAGGATGAAGCTTCCAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR TCA 72 bp TCAGTTGGAAATGCAGAAATCACCCACCTTCTCTGTTaGTCTTGCTGGGAGCAGCAGACTGGAGCATCTCCT +
Preference number: 3 (lower is better)
Translates to: SVGNAEITHLLC*SCWEQQTGASP
Trigger: AGGAGATGCTCCAGTCTGCTGCTCCCAGCAAGATCAACAGAGAAGGTGGGTGATTTCTGCATTTCCAACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR GCA 72 bp CCAACCAAGCTCGAGCATCCCAGGTCAACTTCAGACTaGTATGCTTGCAGGAAGAATTTCAAGCCAGTGGAT +
Preference number: 3 (lower is better)
Translates to: PTKLEHPRSTSD*YACRKNFKPVD
Trigger: ATCCACTGGCTTGAAATTCTTCCTGCAAGCATAGCAGTCTGAAGTTGACCTGGGATGCTCGAGCTTGGTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR CCA 72 bp TGCAGAACAGTAAAGATTGCTGCCCGTTCCTTCCTTTaGAAGCTTCATCCTAGAGGCACACCTGTGAGATGC +
Preference number: 3 (lower is better)
Translates to: CRTVKIAARSFL*KLHPRGTPVRC
Trigger: GCATCTCACAGGTGTGCCTCTAGGATGAAGCTTCCAAAGGAAGGAACGGGCAGCAATCTTTACTGTTCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR TCA 72 bp CCCAGTTCAAACTTCCTGGCAGCTTTGTTTACACTATaGGGGGAAAACTGCCTACTGAAGCCTCAGCAATGG +
Preference number: 3 (lower is better)
Translates to: PSSNFLAALFTL*GENCLLKPQQW
Trigger: CCATTGCTGAGGCTTCAGTAGGCAGTTTTCCCCTCATAGTGTAAACAAAGCTGCCAGGAAGTTTGAACTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR-3UTR CAA 90 bp CTTCTTTGCATTGAGTTAGGACATGCTCCTTTAGCTCAGAGGAGTTTGATATTACACTCCAGACCCTGTTaGCCTGCGAAGGCTGCAGAA +
Preference number: 3 (lower is better)
Translates to: LLCIELGHAPLAQRSLILHSRPC*PAKAAE
Trigger: TTCTGCAGCCTTCGCAGGCAAACAGGGTCTGGAGTG...TAATATCAAACTCCTCTGAGCTAAAGGAGCATGTCCTAACTCAATGCAAAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR TCA 72 bp CTTGTTAGGTTGGGGAGTTTCTCCTGGATGATATCCTaGAGAGTGTTTTCCAAGTTGGTTCCATTCTCCCCC +
Preference number: 3 (lower is better)
Translates to: LVRLGSFSWMIS*RVFSKLVPFSP
Trigger: GGGGGAGAATGGAACCAACTTGGAAAACACTCTTCAGGATATCATCCAGGAGAAACTCCCCAACCTAACAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR TCA 72 bp GCTGTTAGTCTGATGGGCTTCCCTTTGTGGGTAATGTaGGCTTTCTCTCTGGCTGTCCTTAACACCTTAACA +
Preference number: 3 (lower is better)
Translates to: AVSLMGFPLWVM*AFSLAVLNTLT
Trigger: TGTTAAGGTGTTAAGGACAGCCAGAGAGAAAGCTCACATTACCCACAAAGGGAAGCCCATCAGACTAACAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR-3UTR CAA 90 bp AGGTACCTCAGTTGGAAATGCAGAAATCACCCACCTTCTCTGTTGATCTTGCTGTCCTATTTGACCATCTaGCCAGCCACCAAACATAAC +
Preference number: 3 (lower is better)
Translates to: RYLSWKCRNHPPSLLILLSYLTI*PATKHN
Trigger: GTTATGTTTGGTGGCTGGCAAGATGGTCAAATAGGA...CAGCAAGATCAACAGAGAAGGTGGGTGATTTCTGCATTTCCAACTGAGGTACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR-3UTR CAA 90 bp CTTCTTTGCATTGAGTTAGGACATGCTCCTTTAGCTCAGAGGAGTTTGATATTACACCCACCTTCTCTGTaGATCTTGCTGGGAGCAGCA +
Preference number: 3 (lower is better)
Translates to: LLCIELGHAPLAQRSLILHPPSL*ILLGAA
Trigger: TGCTGCTCCCAGCAAGATCAACAGAGAAGGTGGGTG...TAATATCAAACTCCTCTGAGCTAAAGGAGCATGTCCTAACTCAATGCAAAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR TCA 72 bp TGGCCTGTCTTGTTAGGTTGGGGAGTTTCTCCTGGATaGTATCCTGAAGAGTGTTTTCCAAGTTGGTTCCAT +
Preference number: 3 (lower is better)
Translates to: WPVLLGWGVSPG*YPEECFPSWFH
Trigger: ATGGAACCAACTTGGAAAACACTCTTCAGGATATCATCCAGGAGAAACTCCCCAACCTAACAAGACAGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR-3UTR CAA 90 bp GTTCTCGTGCTGTGTTTTTCAGCTCCATCAGGTTATTTATGTTCTCTTCAAACCAGCCAGGTACCTCAGTaGGAAATGCAGAAATCACCC +
Preference number: 3 (lower is better)
Translates to: VLVLCFSAPSGYLCSLQTSQVPQ*EMQKSP
Trigger: GGGTGATTTCTGCATTTCCAACTGAGGTACCTGGCT...GGTTTGAAGAGAACATAAATAACCTGATGGAGCTGAAAAACACAGCACGAGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR CCA 72 bp CCAATCGGTCTTGACTCTATCCAATTTGCCAGTCTGTaGCTTTTAACTGGGGCTTTCAGCCCATTTACATTT +
Preference number: 3 (lower is better)
Translates to: PIGLDSIQFASL*LLTGAFSPFTF
Trigger: AAATGTAAATGGGCTGAAAGCCCCAGTTAAAAGCCACAGACTGGCAAATTGGATAGAGTCAAGACCGATTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR-3UTR CAA 90 bp AGGTACCTCAGTTGGAAATGCAGAAATCACCCACCTTCTCTGTTGATCTTGCTGTTAGGTGCTATCTTATaGTCTCCATGTCCAAGGTTA +
Preference number: 3 (lower is better)
Translates to: RYLSWKCRNHPPSLLILLLGAIL*SPCPRL
Trigger: TAACCTTGGACATGGAGACAATAAGATAGCACCTAA...CAGCAAGATCAACAGAGAAGGTGGGTGATTTCTGCATTTCCAACTGAGGTACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR-3UTR CAA 90 bp GACTCTATCCAATTTGCCAGTCTGTGGCTTTTAACTGGGGCTTTCAGCCCATTTTTCAGCCTTTTTGCATaGGTTTTTCCTCACCATCAT +
Preference number: 3 (lower is better)
Translates to: DSIQFASLWLLTGAFSPFFSLFA*VFPHHH
Trigger: ATGATGGTGAGGAAAAACCAATGCAAAAAGGCTGAA...AAATGGGCTGAAAGCCCCAGTTAAAAGCCACAGACTGGCAAATTGGATAGAGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR CCA 72 bp AATGAGTTAGGGAGGAGCCTCTCGTTTTCTATTGCTTaGAATAGTTTCAGAAGGAATAGTACCAGCTCCTCT +
Preference number: 3 (lower is better)
Translates to: NELGRSLSFSIA*NSFRRNSTSSS
Trigger: AGAGGAGCTGGTACTATTCCTTCTGAAACTATTCCAAGCAATAGAAAACGAGAGGCTCCTCCCTAACTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR-3UTR CAA 90 bp AATTACTTCCATCAATTCATCAAACTCATTCTCTGTCCAGTTTTGTTTCCTTGCGGGTCAAGGACCCACTaGATGCAGGAGTCTATCTCT +
Preference number: 3 (lower is better)
Translates to: NYFHQFIKLILCPVLFPCGSRTH*MQESIS
Trigger: AGAGATAGACTCCTGCATCAAGTGGGTCCTTGACCC...GCAAGGAAACAAAACTGGACAGAGAATGAGTTTGATGAATTGATGGAAGTAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR-3UTR CAA 90 bp GACTCTATCCAATTTGCCAGTCTGTGGCTTTTAACTGGGGCTTTCAGCCCATTTATGTATTTCCTGAATTaGAATGTTGGCCTGTCTTGT +
Preference number: 3 (lower is better)
Translates to: DSIQFASLWLLTGAFSPFMYFLN*NVGLSC
Trigger: ACAAGACAGGCCAACATTCAAATTCAGGAAATACAT...AAATGGGCTGAAAGCCCCAGTTAAAAGCCACAGACTGGCAAATTGGATAGAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR TCA 72 bp CATTTGCTTGGTAAATATTCCTCCATCCCGTTATTTTaGGCCTATGTATGCTTTGCACATGAGATCGGTCTC +
Preference number: 3 (lower is better)
Translates to: HLLGKYSSIPLF*AYVCFAHEIGL
Trigger: GAGACCGATCTCATGTGCAAAGCATACATAGGCTCAAAATAACGGGATGGAGGAATATTTACCAAGCAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR CCA 72 bp TTTGTTTCCTTGCTGGCGTGGAATTGTGATCCTTTGTaGGAGAAGAGATGTCTGGTTTTAGAAATTTTCAGC +
Preference number: 3 (lower is better)
Translates to: FVSLLAWNCDPL*EKRCLVLEIFS
Trigger: GCTGAAAATTTCTAAAACCAGACATCTCTTCTCCCACAAAGGATCACAATTCCACGCCAGCAAGGAAACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR CCA 72 bp CTTGTTTTTGGTCTATTCATGGATTTGACTTCTTCCTaGATTAGACTTGGGAGGGTGTGTGTTTCCAGGAAT +
Preference number: 3 (lower is better)
Translates to: LVFGLFMDLTSS*IRLGRVCVSRN
Trigger: ATTCCTGGAAACACACACCCTCCCAAGTCTAATCCAGGAAGAAGTCAAATCCATGAATAGACCAAAAACAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR TCA 72 bp TCTAACCATTTTTCGAGGTTCTTAGCTTCTTTGCATTaGGTTAGGACATGCTCCTTTAGCTCAGAGGAGTTT +
Preference number: 3 (lower is better)
Translates to: SNHFSRFLASLH*VRTCSFSSEEF
Trigger: AAACTCCTCTGAGCTAAAGGAGCATGTCCTAACTCAATGCAAAGAAGCTAAGAACCTCGAAAAATGGTTAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR TCA 72 bp TCAAAGGGAATGCGTCCAGTTTTTGCCCATTCAGTATaGTATTGGCTGTGGGTTTGTCATAATAGCTCTTAT +
Preference number: 3 (lower is better)
Translates to: SKGMRPVFAHSV*YWLWVCHNSSY
Trigger: ATAAGAGCTATTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGACGCATTCCCTTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR GCA 72 bp TTCTGTTTGATCGATTTGGCTATTGATGCTTGTGTATaGTTCATGAAGTTCTCGTGCTGTGTTTTTCAGCTC +
Preference number: 3 (lower is better)
Translates to: FCLIDLAIDACV*FMKFSCCVFQL
Trigger: GAGCTGAAAAACACAGCACGAGAACTTCATGAAGCATACACAAGCATCAATAGCCAAATCGATCAAACAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR-3UTR CAA 90 bp GTTCTCGTGCTGTGTTTTTCAGCTCCATCAGGTTATTTATGTTCTCTTCAAACCAATTTTCACCTCTTCTaGAAGATAGAGCCTCAAAGA +
Preference number: 3 (lower is better)
Translates to: VLVLCFSAPSGYLCSLQTNFHLF*KIEPQR
Trigger: TCTTTGAGGCTCTATCTTCAAGAAGAGGTGAAAATT...GGTTTGAAGAGAACATAAATAACCTGATGGAGCTGAAAAACACAGCACGAGAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR-3UTR CAA 90 bp AATTACTTCCATCAATTCATCAAACTCATTCTCTGTCCAGTTTTGTTTCCTTGCTTCAGACTGCTATGCTaGCAGGAAGAATTTCAAGCC +
Preference number: 3 (lower is better)
Translates to: NYFHQFIKLILCPVLFPCFRLLC*QEEFQA
Trigger: GGCTTGAAATTCTTCCTGCAAGCATAGCAGTCTGAA...GCAAGGAAACAAAACTGGACAGAGAATGAGTTTGATGAATTGATGGAAGTAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR TCA 72 bp CCTCTAAACACTGCTTTAGCTATGTCCCAGAGATTCTaGTACCTTGTGTCTTTGTTCTCATTGGTTTCAAAT +
Preference number: 3 (lower is better)
Translates to: PLNTALAMSQRF*YLVSLFSLVSN
Trigger: ATTTGAAACCAATGAGAACAAAGACACAAGGTATCAGAATCTCTGGGACATAGCTAAAGCAGTGTTTAGAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR GCA 72 bp TTTCAGCCTTTTTGCATTGGTTTTTCCTCACCATCATaGATTTATCTACCTTTGGTCTTTGATGTTGGTGGT +
Preference number: 3 (lower is better)
Translates to: FQPFCIGFSSPS*IYLPLVFDVGG
Trigger: ACCACCAACATCAAAGACCAAAGGTAGATAAATGCATGATGGTGAGGAAAAACCAATGCAAAAAGGCTGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR GCA 72 bp GCTATTGATGCTTGTGTATGCTTCATGAAGTTCTCGTaGTGTGTTTTTCAGCTCCATCAGGTTATTTATGTT +
Preference number: 3 (lower is better)
Translates to: AIDACVCFMKFS*CVFQLHQVIYV
Trigger: AACATAAATAACCTGATGGAGCTGAAAAACACAGCACGAGAACTTCATGAAGCATACACAAGCATCAATAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR TCA 72 bp TGCTTTTCTGTAAAGGATTTTATTTCCCTCCACTCATaGAGCTTAGTTTGGCTGAATATGAAACTCTGCATT +
Preference number: 3 (lower is better)
Translates to: CFSVKDFISLHS*SLVWLNMKLCI
Trigger: AATGCAGAGTTTCATATTCAGCCAAACTAAGCTTCATGAGTGGAGGGAAATAAAATCCTTTACAGAAAAGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR GCA 72 bp CAACACCATTTATTAAATAGGGAATCCTTTCCTCATTaGTTGTTTTTGTCAGGTTTGTCAAAGATCAGATGG +
Preference number: 3 (lower is better)
Translates to: QHHLLNRESFPH*LFLSGLSKIRW
Trigger: CCATCTGATCTTTGACAAACCTGACAAAAACAAGCAATGAGGAAAGGATTCCCTATTTAATAAATGGTGTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR CCA 72 bp TCTAGGTATTTTACACTCTTTTGTAGCAATTGTGAATaGCAGTTCATTCGATTTGGCTCTGTTTGTCTGTTA +
Preference number: 3 (lower is better)
Translates to: SRYFTLFCSNCE*QFIRFGSVCLL
Trigger: TAACAGACAAACAGAGCCAAATCGAATGAACTGCCATTCACAATTGCTACAAAAGAGTGTAAAATACCTAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR TCA 90 bp AGTTTGCCAACCCTTTGTGCTTCCCGGGTGAAGCAACACCCCACCCTGCTTCTGGGGAAAACTGCCTACTaGAGCCTCAGCAATGGCGGA +
Preference number: 4 (lower is better)
Translates to: SLPTLCASRVKQHPTLLLGKTAY*SLSNGG
Trigger: TCCGCCATTGCTGAGGCTTCAGTAGGCAGTTTTCCC...CAGAAGCAGGGTGGGGTGTTGCTTCACCCGGGAAGCACAAAGGGTTGGCAAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR TCA 90 bp TGCCACTGGGGTATGAAGAAAACTCCTGCAGCTAGCTCAGTGCCTGCCCAAACACAGCCGCTGTTAGTCTaGTGGGCTTCCCTTTGTGGG +
Preference number: 4 (lower is better)
Translates to: CHWGMKKTPAASSVPAQTQPLLV*WASLCG
Trigger: CCCACAAAGGGAAGCCCATCAGACTAACAGCGGCTG...TGTTTGGGCAGGCACTGAGCTAGCTGCAGGAGTTTTCTTCATACCCCAGTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR CAA 72 bp ACCCGTTCCTCATGGCACAGTCCTTCATGGCTTCCCTaGGCTAGTGGAGGGAGTTTGCCAACCCTTTGTGCT +
Preference number: 4 (lower is better)
Translates to: TRSSWHSPSWLP*ASGGSLPTLCA
Trigger: AGCACAAAGGGTTGGCAAACTCCCTCCACTAGCCAAGGGAAGCCATGAAGGACTGTGCCATGAGGAACGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR GCA 90 bp AGTTTGCCAACCCTTTGTGCTTCCCGGGTGAAGCAACACCCCACCCTGCTTCTGGTCATAAGCCATTGCTaGCAGGATAAGGCACTCAGC +
Preference number: 4 (lower is better)
Translates to: SLPTLCASRVKQHPTLLLVISHC*QDKALS
Trigger: GCTGAGTGCCTTATCCTGGCAGCAATGGCTTATGAC...CAGAAGCAGGGTGGGGTGTTGCTTCACCCGGGAAGCACAAAGGGTTGGCAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR TCA 90 bp AGTTTGCCAACCCTTTGTGCTTCCCGGGTGAAGCAACACCCCACCCTGCTTCTGCCCAGTAGTCATTCATaGGCAGGTTGTTCAGTTTCC +
Preference number: 4 (lower is better)
Translates to: SLPTLCASRVKQHPTLLLPSSHS*AGCSVS
Trigger: GGAAACTGAACAACCTGCTCATGAATGACTACTGGG...CAGAAGCAGGGTGGGGTGTTGCTTCACCCGGGAAGCACAAAGGGTTGGCAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR TCA 90 bp TGCCACTGGGGTATGAAGAAAACTCCTGCAGCTAGCTCAGTGCCTGCCCAAACATTTGCTTCTGCCACCTaGGGACTTGATGCTCAACAC +
Preference number: 4 (lower is better)
Translates to: CHWGMKKTPAASSVPAQTFASAT*GLDAQH
Trigger: GTGTTGAGCATCAAGTCCTCAGGTGGCAGAAGCAAA...TGTTTGGGCAGGCACTGAGCTAGCTGCAGGAGTTTTCTTCATACCCCAGTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR TCA 90 bp AGTTTGCCAACCCTTTGTGCTTCCCGGGTGAAGCAACACCCCACCCTGCTTCTGGTGTGGTGTTATTTGTaGGGCCTCTATTCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: SLPTLCASRVKQHPTLLLVWCYL*GLYSVP
Trigger: TGGAACAGAATAGAGGCCTCACAAATAACACCACAC...CAGAAGCAGGGTGGGGTGTTGCTTCACCCGGGAAGCACAAAGGGTTGGCAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR GCA 90 bp AGGTACCTCAGTTGGAAATGCAGAAATCACCCACCTTCTCTGTTGATCTTGCTGGTCAGGCCCCTCTGCTaGAGGTCTGCTGGAGTTTGC +
Preference number: 4 (lower is better)
Translates to: RYLSWKCRNHPPSLLILLVRPLC*RSAGVC
Trigger: GCAAACTCCAGCAGACCTGCAGCAGAGGGGCCTGAC...CAGCAAGATCAACAGAGAAGGTGGGTGATTTCTGCATTTCCAACTGAGGTACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR GCA 90 bp ACCAGTCCCAATGAGATGAGCCAGGTACCTCAGTTGGAAATGCAGAAATCACCCATTGTCAGGCCCCTCTaGTGCAGGTCTGCTGGAGTT +
Preference number: 4 (lower is better)
Translates to: TSPNEMSQVPQLEMQKSPIVRPL*CRSAGV
Trigger: AACTCCAGCAGACCTGCAGCAGAGGGGCCTGACAAT...GGGTGATTTCTGCATTTCCAACTGAGGTACCTGGCTCATCTCATTGGGACTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR GCA 90 bp GACTCTATCCAATTTGCCAGTCTGTGGCTTTTAACTGGGGCTTTCAGCCCATTTAGCAACACCCCACCCTaGTTCTGCTCACCCACCATG +
Preference number: 4 (lower is better)
Translates to: DSIQFASLWLLTGAFSPFSNTPP*FCSPTM
Trigger: CATGGTGGGTGAGCAGAAGCAGGGTGGGGTGTTGCT...AAATGGGCTGAAAGCCCCAGTTAAAAGCCACAGACTGGCAAATTGGATAGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR GCA 90 bp ACCAGTCCCAATGAGATGAGCCAGGTACCTCAGTTGGAAATGCAGAAATCACCCCTAGTGGAGGGAGTTTaGCAACCCTTTGTGCTTCCC +
Preference number: 4 (lower is better)
Translates to: TSPNEMSQVPQLEMQKSPLVEGV*QPFVLP
Trigger: GGGAAGCACAAAGGGTTGGCAAACTCCCTCCACTAG...GGGTGATTTCTGCATTTCCAACTGAGGTACCTGGCTCATCTCATTGGGACTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR GCA 90 bp AGTTTGCCAACCCTTTGTGCTTCCCGGGTGAAGCAACACCCCACCCTGCTTCTGAGGTCAACTTCAGACTaGTATGCTTGCAGGAAGAAT +
Preference number: 4 (lower is better)
Translates to: SLPTLCASRVKQHPTLLLRSTSD*YACRKN
Trigger: ATTCTTCCTGCAAGCATAGCAGTCTGAAGTTGACCT...CAGAAGCAGGGTGGGGTGTTGCTTCACCCGGGAAGCACAAAGGGTTGGCAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR GCA 90 bp AGGTACCTCAGTTGGAAATGCAGAAATCACCCACCTTCTCTGTTGATCTTGCTGGAGGTTTTGCAGTGCTaGGGTGGGCTCCACCCAGTT +
Preference number: 4 (lower is better)
Translates to: RYLSWKCRNHPPSLLILLEVLQC*GGLHPV
Trigger: AACTGGGTGGAGCCCACCGCAGCACTGCAAAACCTC...CAGCAAGATCAACAGAGAAGGTGGGTGATTTCTGCATTTCCAACTGAGGTACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR GCA 90 bp GACTCTATCCAATTTGCCAGTCTGTGGCTTTTAACTGGGGCTTTCAGCCCATTTGGCACACCTGTGAGATaGCAGCTGGAGCTCTCTCCT +
Preference number: 4 (lower is better)
Translates to: DSIQFASLWLLTGAFSPFGTPVR*QLELSP
Trigger: AGGAGAGAGCTCCAGCTGGCATCTCACAGGTGTGCC...AAATGGGCTGAAAGCCCCAGTTAAAAGCCACAGACTGGCAAATTGGATAGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR GCA 90 bp ACCAGTCCCAATGAGATGAGCCAGGTACCTCAGTTGGAAATGCAGAAATCACCCCAGACCCTGTTTGCCTaGGAAGGCTGCAGAACAGTA +
Preference number: 4 (lower is better)
Translates to: TSPNEMSQVPQLEMQKSPQTLFA*EGCRTV
Trigger: TACTGTTCTGCAGCCTTCGCAGGCAAACAGGGTCTG...GGGTGATTTCTGCATTTCCAACTGAGGTACCTGGCTCATCTCATTGGGACTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR CCA 90 bp ACCAGTCCCAATGAGATGAGCCAGGTACCTCAGTTGGAAATGCAGAAATCACCCTGCACCCGTTCCTCATaGCACAGTCCTTCATGGCTT +
Preference number: 4 (lower is better)
Translates to: TSPNEMSQVPQLEMQKSPCTRSS*HSPSWL
Trigger: AAGCCATGAAGGACTGTGCCATGAGGAACGGGTGCA...GGGTGATTTCTGCATTTCCAACTGAGGTACCTGGCTCATCTCATTGGGACTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR TCA 90 bp TGCCACTGGGGTATGAAGAAAACTCCTGCAGCTAGCTCAGTGCCTGCCCAAACATTTCTTGAGAACCAGTaGAACCACCATCAGTATCCC +
Preference number: 4 (lower is better)
Translates to: CHWGMKKTPAASSVPAQTFLENQ*NHHQYP
Trigger: GGGATACTGATGGTGGTTTCACTGGTTCTCAAGAAA...TGTTTGGGCAGGCACTGAGCTAGCTGCAGGAGTTTTCTTCATACCCCAGTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR TCA 90 bp GACTCTATCCAATTTGCCAGTCTGTGGCTTTTAACTGGGGCTTTCAGCCCATTTACCCACCTTCTCTGTTaGTCTTGCTGGGAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: DSIQFASLWLLTGAFSPFTHLLC*SCWEQQ
Trigger: CTGCTGCTCCCAGCAAGATCAACAGAGAAGGTGGGT...AAATGGGCTGAAAGCCCCAGTTAAAAGCCACAGACTGGCAAATTGGATAGAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR GCA 90 bp AGTTTGCCAACCCTTTGTGCTTCCCGGGTGAAGCAACACCCCACCCTGCTTCTGAACAGTATAAAACACTaGCACCACCTTATCAGTGTC +
Preference number: 4 (lower is better)
Translates to: SLPTLCASRVKQHPTLLLNSIKH*HHLISV
Trigger: GACACTGATAAGGTGGTGGCAGTGTTTTATACTGTT...CAGAAGCAGGGTGGGGTGTTGCTTCACCCGGGAAGCACAAAGGGTTGGCAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR TCA 90 bp TGCCACTGGGGTATGAAGAAAACTCCTGCAGCTAGCTCAGTGCCTGCCCAAACATCCATCCCGTTATTTTaGGCCTATGTATGCTTTGCA +
Preference number: 4 (lower is better)
Translates to: CHWGMKKTPAASSVPAQTSIPLF*AYVCFA
Trigger: TGCAAAGCATACATAGGCTCAAAATAACGGGATGGA...TGTTTGGGCAGGCACTGAGCTAGCTGCAGGAGTTTTCTTCATACCCCAGTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR GCA 90 bp TGCCACTGGGGTATGAAGAAAACTCCTGCAGCTAGCTCAGTGCCTGCCCAAACATCAGACTGCTATGCTTaGAGGAAGAATTTCAAGCCA +
Preference number: 4 (lower is better)
Translates to: CHWGMKKTPAASSVPAQTSDCYA*RKNFKP
Trigger: TGGCTTGAAATTCTTCCTGCAAGCATAGCAGTCTGA...TGTTTGGGCAGGCACTGAGCTAGCTGCAGGAGTTTTCTTCATACCCCAGTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR CCA 90 bp GACTCTATCCAATTTGCCAGTCTGTGGCTTTTAACTGGGGCTTTCAGCCCATTTCTGGGAGCAGCAGACTaGAGCATCTCCTATTTGACC +
Preference number: 4 (lower is better)
Translates to: DSIQFASLWLLTGAFSPFLGAAD*SISYLT
Trigger: GGTCAAATAGGAGATGCTCCAGTCTGCTGCTCCCAG...AAATGGGCTGAAAGCCCCAGTTAAAAGCCACAGACTGGCAAATTGGATAGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR TCA 90 bp ACCAGTCCCAATGAGATGAGCCAGGTACCTCAGTTGGAAATGCAGAAATCACCCAATATGCCAACACAATaGAGCAGACACAGACTCTCC +
Preference number: 4 (lower is better)
Translates to: TSPNEMSQVPQLEMQKSPNMPTQ*SRHRLS
Trigger: GGAGAGTCTGTGTCTGCTTCATTGTGTTGGCATATT...GGGTGATTTCTGCATTTCCAACTGAGGTACCTGGCTCATCTCATTGGGACTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR TCA 90 bp GTTCTCGTGCTGTGTTTTTCAGCTCCATCAGGTTATTTATGTTCTCTTCAAACCCTAGAGGCACACCTGTaGGATGCCAGCTGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: VLVLCFSAPSGYLCSLQTLEAHL*DASWSS
Trigger: AGAGCTCCAGCTGGCATCTCACAGGTGTGCCTCTAG...GGTTTGAAGAGAACATAAATAACCTGATGGAGCTGAAAAACACAGCACGAGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR TCA 90 bp AGGTACCTCAGTTGGAAATGCAGAAATCACCCACCTTCTCTGTTGATCTTGCTGCCTTTGTGGGTAATGTaGGCTTTCTCTCTGGCTGTC +
Preference number: 4 (lower is better)
Translates to: RYLSWKCRNHPPSLLILLPLWVM*AFSLAV
Trigger: GACAGCCAGAGAGAAAGCTCACATTACCCACAAAGG...CAGCAAGATCAACAGAGAAGGTGGGTGATTTCTGCATTTCCAACTGAGGTACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR TCA 90 bp TGCCACTGGGGTATGAAGAAAACTCCTGCAGCTAGCTCAGTGCCTGCCCAAACACTTTTCGGCATCTGTTaGGATAAACATGTGCTTTTG +
Preference number: 4 (lower is better)
Translates to: CHWGMKKTPAASSVPAQTLFGIC*DKHVLL
Trigger: CAAAAGCACATGTTTATCTCAACAGATGCCGAAAAG...TGTTTGGGCAGGCACTGAGCTAGCTGCAGGAGTTTTCTTCATACCCCAGTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR GCA 90 bp CTTCTTTGCATTGAGTTAGGACATGCTCCTTTAGCTCAGAGGAGTTTGATATTACTGCAGCTAGCTCAGTaGCTGCCCAAACAGCCACCG +
Preference number: 4 (lower is better)
Translates to: LLCIELGHAPLAQRSLILLQLAQ*LPKQPP
Trigger: CGGTGGCTGTTTGGGCAGGCACTGAGCTAGCTGCAG...TAATATCAAACTCCTCTGAGCTAAAGGAGCATGTCCTAACTCAATGCAAAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR GCA 90 bp ACCAGTCCCAATGAGATGAGCCAGGTACCTCAGTTGGAAATGCAGAAATCACCCTTTTTAGAGATCCCCTaGCCAGAGAGGAGGAATCTA +
Preference number: 4 (lower is better)
Translates to: TSPNEMSQVPQLEMQKSPFLEIP*PERRNL
Trigger: TAGATTCCTCCTCTCTGGGCAGGGGATCTCTAAAAA...GGGTGATTTCTGCATTTCCAACTGAGGTACCTGGCTCATCTCATTGGGACTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR GCA 90 bp ACCAGTCCCAATGAGATGAGCCAGGTACCTCAGTTGGAAATGCAGAAATCACCCTTTGCCTGCGAAGGCTaGAGAACAGTAAAGATTGCT +
Preference number: 4 (lower is better)
Translates to: TSPNEMSQVPQLEMQKSPFACEG*RTVKIA
Trigger: AGCAATCTTTACTGTTCTGCAGCCTTCGCAGGCAAA...GGGTGATTTCTGCATTTCCAACTGAGGTACCTGGCTCATCTCATTGGGACTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR CCA 90 bp ACCAGTCCCAATGAGATGAGCCAGGTACCTCAGTTGGAAATGCAGAAATCACCCGAGAGATGCTTTTCCTaGATGCCAAGAAGTTTGCCA +
Preference number: 4 (lower is better)
Translates to: TSPNEMSQVPQLEMQKSPERCFS*MPRSLP
Trigger: TGGCAAACTTCTTGGCATCCAGGAAAAGCATCTCTC...GGGTGATTTCTGCATTTCCAACTGAGGTACCTGGCTCATCTCATTGGGACTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR CCA 90 bp ACCAGTCCCAATGAGATGAGCCAGGTACCTCAGTTGGAAATGCAGAAATCACCCTCTGTGGCTTTTAACTaGGGCTTTCAGCCCATTTAC +
Preference number: 4 (lower is better)
Translates to: TSPNEMSQVPQLEMQKSPSVAFN*GFQPIY
Trigger: GTAAATGGGCTGAAAGCCCCAGTTAAAAGCCACAGA...GGGTGATTTCTGCATTTCCAACTGAGGTACCTGGCTCATCTCATTGGGACTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR CCA 90 bp AGGTACCTCAGTTGGAAATGCAGAAATCACCCACCTTCTCTGTTGATCTTGCTGATTGCCTGGGCTACATaGGCTGTTTTCTGGTTCCAC +
Preference number: 4 (lower is better)
Translates to: RYLSWKCRNHPPSLLILLIAWAT*AVFWFH
Trigger: GTGGAACCAGAAAACAGCCCATGTAGCCCAGGCAAT...CAGCAAGATCAACAGAGAAGGTGGGTGATTTCTGCATTTCCAACTGAGGTACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR TCA 90 bp TGCCACTGGGGTATGAAGAAAACTCCTGCAGCTAGCTCAGTGCCTGCCCAAACATTGATCTTCAATCTCTaGTATCCTTCCTTCTGTTTG +
Preference number: 4 (lower is better)
Translates to: CHWGMKKTPAASSVPAQTLIFNL*YPSFCL
Trigger: CAAACAGAAGGAAGGATATCAGAGATTGAAGATCAA...TGTTTGGGCAGGCACTGAGCTAGCTGCAGGAGTTTTCTTCATACCCCAGTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR TCA 90 bp ACCAGTCCCAATGAGATGAGCCAGGTACCTCAGTTGGAAATGCAGAAATCACCCGTTTTCATATCAGGATaGTGCTGGCCGCATAAAATG +
Preference number: 4 (lower is better)
Translates to: TSPNEMSQVPQLEMQKSPVFISG*CWPHKM
Trigger: CATTTTATGCGGCCAGCATCATCCTGATATGAAAAC...GGGTGATTTCTGCATTTCCAACTGAGGTACCTGGCTCATCTCATTGGGACTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR TCA 90 bp TGCCACTGGGGTATGAAGAAAACTCCTGCAGCTAGCTCAGTGCCTGCCCAAACACAATACCTAGTTTATTaGGAGTTTTTAGCACGAAGG +
Preference number: 4 (lower is better)
Translates to: CHWGMKKTPAASSVPAQTQYLVY*EFLARR
Trigger: CCTTCGTGCTAAAAACTCTCAATAAACTAGGTATTG...TGTTTGGGCAGGCACTGAGCTAGCTGCAGGAGTTTTCTTCATACCCCAGTGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR GCA 90 bp CTTCTTTGCATTGAGTTAGGACATGCTCCTTTAGCTCAGAGGAGTTTGATATTACAGTGGATCTTAGCTTaGTGGGCTCCATGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: LLCIELGHAPLAQRSLILQWILA*WAPWGW
Trigger: CCACCCCCATGGAGCCCAGCAAGCTAAGATCCACTG...TAATATCAAACTCCTCTGAGCTAAAGGAGCATGTCCTAACTCAATGCAAAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR GCA 90 bp ACCAGTCCCAATGAGATGAGCCAGGTACCTCAGTTGGAAATGCAGAAATCACCCGCTAGCTGGTTATTTTaGCCATTAGCTGATGTGGTT +
Preference number: 4 (lower is better)
Translates to: TSPNEMSQVPQLEMQKSPASWLF*PLADVV
Trigger: AACCACATCAGCTAATGGGCAAAATAACCAGCTAGC...GGGTGATTTCTGCATTTCCAACTGAGGTACCTGGCTCATCTCATTGGGACTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR GCA 90 bp ACCAGTCCCAATGAGATGAGCCAGGTACCTCAGTTGGAAATGCAGAAATCACCCGGCATCATTGTTTTGTaGCGGTTTTCAAAGGGAATG +
Preference number: 4 (lower is better)
Translates to: TSPNEMSQVPQLEMQKSPGIIVL*RFSKGM
Trigger: CATTCCCTTTGAAAACCGGCACAAAACAATGATGCC...GGGTGATTTCTGCATTTCCAACTGAGGTACCTGGCTCATCTCATTGGGACTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR GCA 90 bp AGGTACCTCAGTTGGAAATGCAGAAATCACCCACCTTCTCTGTTGATCTTGCTGAAGGGGTCCAGTTTCTaGTTTCTGCATATGGCTAGC +
Preference number: 4 (lower is better)
Translates to: RYLSWKCRNHPPSLLILLKGSSF*FLHMAS
Trigger: GCTAGCCATATGCAGAAAGCAGAAACTGGACCCCTT...CAGCAAGATCAACAGAGAAGGTGGGTGATTTCTGCATTTCCAACTGAGGTACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR CCA 90 bp ACCAGTCCCAATGAGATGAGCCAGGTACCTCAGTTGGAAATGCAGAAATCACCCGGAACTCAGTTGGCATaGTGTAATTACTCTCCAACA +
Preference number: 4 (lower is better)
Translates to: TSPNEMSQVPQLEMQKSPGTQLA*CNYSPT
Trigger: TGTTGGAGAGTAATTACACCATGCCAACTGAGTTCC...GGGTGATTTCTGCATTTCCAACTGAGGTACCTGGCTCATCTCATTGGGACTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR CAA 72 bp ATCTTGCTGGGAGCAGCAGACTGGAGCATCTCCTATTaGACCATCTTGCCAGCCACCAAACATAACTATGAT +
Preference number: 4 (lower is better)
Translates to: ILLGAADWSISY*TILPATKHNYD
Trigger: ATCATAGTTATGTTTGGTGGCTGGCAAGATGGTCAAATAGGAGATGCTCCAGTCTGCTGCTCCCAGCAAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR CAA 72 bp CTAACCAGTCCCAATGAGATGAGCCAGGTACCTCAGTaGGAAATGCAGAAATCACCCACCTTCTCTGTTGAT +
Preference number: 4 (lower is better)
Translates to: LTSPNEMSQVPQ*EMQKSPTFSVD
Trigger: ATCAACAGAGAAGGTGGGTGATTTCTGCATTTCCAACTGAGGTACCTGGCTCATCTCATTGGGACTGGTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR TCA 90 bp AGGTACCTCAGTTGGAAATGCAGAAATCACCCACCTTCTCTGTTGATCTTGCTGTCTACCTTTGGTCTTTaGTGTTGGTGGTGGAGTTTC +
Preference number: 4 (lower is better)
Translates to: RYLSWKCRNHPPSLLILLSTFGL*CWWWSF
Trigger: GAAACTCCACCACCAACATCAAAGACCAAAGGTAGA...CAGCAAGATCAACAGAGAAGGTGGGTGATTTCTGCATTTCCAACTGAGGTACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR TCA 90 bp AGGTACCTCAGTTGGAAATGCAGAAATCACCCACCTTCTCTGTTGATCTTGCTGGATTGCACTGTGGTCTaGGAGACTGTTATGATTTCC +
Preference number: 4 (lower is better)
Translates to: RYLSWKCRNHPPSLLILLDCTVV*ETVMIS
Trigger: GGAAATCATAACAGTCTCTCAGACCACAGTGCAATC...CAGCAAGATCAACAGAGAAGGTGGGTGATTTCTGCATTTCCAACTGAGGTACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR GCA 90 bp ACCAGTCCCAATGAGATGAGCCAGGTACCTCAGTTGGAAATGCAGAAATCACCCCATTTTAGGAGTGATTaGTGTAGAACAGCTGATGTC +
Preference number: 4 (lower is better)
Translates to: TSPNEMSQVPQLEMQKSPHFRSD*CRTADV
Trigger: GACATCAGCTGTTCTACAGCAATCACTCCTAAAATG...GGGTGATTTCTGCATTTCCAACTGAGGTACCTGGCTCATCTCATTGGGACTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR GCA 90 bp GACTCTATCCAATTTGCCAGTCTGTGGCTTTTAACTGGGGCTTTCAGCCCATTTGATGCTTTTCCTGGATaGCAAGAAGTTTGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: DSIQFASLWLLTGAFSPFDAFPG*QEVCQH
Trigger: ATGCTGGCAAACTTCTTGGCATCCAGGAAAAGCATC...AAATGGGCTGAAAGCCCCAGTTAAAAGCCACAGACTGGCAAATTGGATAGAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR CCA 90 bp TGCCACTGGGGTATGAAGAAAACTCCTGCAGCTAGCTCAGTGCCTGCCCAAACATTTGGGACTTGTTTTTaGTCTATTCATGGATTTGAC +
Preference number: 4 (lower is better)
Translates to: CHWGMKKTPAASSVPAQTFGTCF*SIHGFD
Trigger: GTCAAATCCATGAATAGACCAAAAACAAGTCCCAAA...TGTTTGGGCAGGCACTGAGCTAGCTGCAGGAGTTTTCTTCATACCCCAGTGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR GCA 90 bp CTTCTTTGCATTGAGTTAGGACATGCTCCTTTAGCTCAGAGGAGTTTGATATTAGCGGTCATAAGCCATTaGTGCCAGGATAAGGCACTC +
Preference number: 4 (lower is better)
Translates to: LLCIELGHAPLAQRSLILAVISH*CQDKAL
Trigger: GAGTGCCTTATCCTGGCAGCAATGGCTTATGACCGC...TAATATCAAACTCCTCTGAGCTAAAGGAGCATGTCCTAACTCAATGCAAAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR GCA 90 bp CTTCTTTGCATTGAGTTAGGACATGCTCCTTTAGCTCAGAGGAGTTTGATATTAAGCCACCGAGTTTTGTaGTTCAATCCCAGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: LLCIELGHAPLAQRSLILSHRVL*FNPREL
Trigger: CAGCTCCCTGGGATTGAAGCACAAAACTCGGTGGCT...TAATATCAAACTCCTCTGAGCTAAAGGAGCATGTCCTAACTCAATGCAAAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR GCA 90 bp GACTCTATCCAATTTGCCAGTCTGTGGCTTTTAACTGGGGCTTTCAGCCCATTTCAGCTTTGTTCTTTTTaGTTAGGATTGCCTGGGCTA +
Preference number: 4 (lower is better)
Translates to: DSIQFASLWLLTGAFSPFQLCSF*LGLPGL
Trigger: TAGCCCAGGCAATCCTAAGCAAAAAGAACAAAGCTG...AAATGGGCTGAAAGCCCCAGTTAAAAGCCACAGACTGGCAAATTGGATAGAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR GCA 90 bp AGGTACCTCAGTTGGAAATGCAGAAATCACCCACCTTCTCTGTTGATCTTGCTGCCAGTTTCTGCTTTCTaGATATGGCTAGCCAGTTTT +
Preference number: 4 (lower is better)
Translates to: RYLSWKCRNHPPSLLILLPVSAF*IWLASF
Trigger: AAAACTGGCTAGCCATATGCAGAAAGCAGAAACTGG...CAGCAAGATCAACAGAGAAGGTGGGTGATTTCTGCATTTCCAACTGAGGTACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR CCA 90 bp GTTCTCGTGCTGTGTTTTTCAGCTCCATCAGGTTATTTATGTTCTCTTCAAACCGAAAAGCATAGTATCTaGGCCAGAGTGCACCCGTTC +
Preference number: 4 (lower is better)
Translates to: VLVLCFSAPSGYLCSLQTEKHSI*ARVHPF
Trigger: GAACGGGTGCACTCTGGCCCAGATACTATGCTTTTC...GGTTTGAAGAGAACATAAATAACCTGATGGAGCTGAAAAACACAGCACGAGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR CCA 90 bp CTTCTTTGCATTGAGTTAGGACATGCTCCTTTAGCTCAGAGGAGTTTGATATTAGCCCGTTCCTTCCTTTaGAAGCTTCATCCTAGAGGC +
Preference number: 4 (lower is better)
Translates to: LLCIELGHAPLAQRSLILARSFL*KLHPRG
Trigger: GCCTCTAGGATGAAGCTTCCAAAGGAAGGAACGGGC...TAATATCAAACTCCTCTGAGCTAAAGGAGCATGTCCTAACTCAATGCAAAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR CCA 90 bp GACTCTATCCAATTTGCCAGTCTGTGGCTTTTAACTGGGGCTTTCAGCCCATTTGTTTTGTTTCCTTGCTaGCGTGGAATTGTGATCCTT +
Preference number: 4 (lower is better)
Translates to: DSIQFASLWLLTGAFSPFVLFPC*RGIVIL
Trigger: AAGGATCACAATTCCACGCCAGCAAGGAAACAAAAC...AAATGGGCTGAAAGCCCCAGTTAAAAGCCACAGACTGGCAAATTGGATAGAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR CCA 90 bp ACCAGTCCCAATGAGATGAGCCAGGTACCTCAGTTGGAAATGCAGAAATCACCCCATTATGATGCTAGCTaGTTATTTTGCCCATTAGCT +
Preference number: 4 (lower is better)
Translates to: TSPNEMSQVPQLEMQKSPHYDAS*LFCPLA
Trigger: AGCTAATGGGCAAAATAACCAGCTAGCATCATAATG...GGGTGATTTCTGCATTTCCAACTGAGGTACCTGGCTCATCTCATTGGGACTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR TCA 90 bp GACTCTATCCAATTTGCCAGTCTGTGGCTTTTAACTGGGGCTTTCAGCCCATTTAGAAGCTGGTTGATCTaGGTGTCTGTACATGATAAA +
Preference number: 4 (lower is better)
Translates to: DSIQFASLWLLTGAFSPFRSWLI*VSVHDK
Trigger: TTTATCATGTACAGACACTCAGATCAACCAGCTTCT...AAATGGGCTGAAAGCCCCAGTTAAAAGCCACAGACTGGCAAATTGGATAGAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR TCA 90 bp AGGTACCTCAGTTGGAAATGCAGAAATCACCCACCTTCTCTGTTGATCTTGCTGAGCCCAAAGACAATGTaGTGTATCTTCATTCTGACT +
Preference number: 4 (lower is better)
Translates to: RYLSWKCRNHPPSLLILLSPKTM*CIFILT
Trigger: AGTCAGAATGAAGATACATCACATTGTCTTTGGGCT...CAGCAAGATCAACAGAGAAGGTGGGTGATTTCTGCATTTCCAACTGAGGTACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR TCA 90 bp AGGTACCTCAGTTGGAAATGCAGAAATCACCCACCTTCTCTGTTGATCTTGCTGGATCGATTTGGCTATTaGTGCTTGTGTATGCTTCAT +
Preference number: 4 (lower is better)
Translates to: RYLSWKCRNHPPSLLILLDRFGY*CLCMLH
Trigger: ATGAAGCATACACAAGCATCAATAGCCAAATCGATC...CAGCAAGATCAACAGAGAAGGTGGGTGATTTCTGCATTTCCAACTGAGGTACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR TCA 90 bp GACTCTATCCAATTTGCCAGTCTGTGGCTTTTAACTGGGGCTTTCAGCCCATTTCTTTCAATACTATGTTaGATAGGAGTGGTGAGAGAG +
Preference number: 4 (lower is better)
Translates to: DSIQFASLWLLTGAFSPFLSILC*IGVVRE
Trigger: CTCTCTCACCACTCCTATTCAACATAGTATTGAAAG...AAATGGGCTGAAAGCCCCAGTTAAAAGCCACAGACTGGCAAATTGGATAGAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR CCA 90 bp GTTCTCGTGCTGTGTTTTTCAGCTCCATCAGGTTATTTATGTTCTCTTCAAACCCATTCCAGGTGCCACTaGGGTATGAAGAAAACTCCT +
Preference number: 4 (lower is better)
Translates to: VLVLCFSAPSGYLCSLQTHSRCH*GMKKTP
Trigger: AGGAGTTTTCTTCATACCCCAGTGGCACCTGGAATG...GGTTTGAAGAGAACATAAATAACCTGATGGAGCTGAAAAACACAGCACGAGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR CCA 90 bp AGGTACCTCAGTTGGAAATGCAGAAATCACCCACCTTCTCTGTTGATCTTGCTGGCATTTATCTACCTTTaGTCTTTGATGTTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: RYLSWKCRNHPPSLLILLAFIYL*SLMLVV
Trigger: CACCACCAACATCAAAGACCAAAGGTAGATAAATGC...CAGCAAGATCAACAGAGAAGGTGGGTGATTTCTGCATTTCCAACTGAGGTACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR CCA 90 bp AGGTACCTCAGTTGGAAATGCAGAAATCACCCACCTTCTCTGTTGATCTTGCTGTCAGCCTTTTTGCATTaGTTTTTCCTCACCATCATG +
Preference number: 4 (lower is better)
Translates to: RYLSWKCRNHPPSLLILLSAFLH*FFLTIM
Trigger: CATGATGGTGAGGAAAAACCAATGCAAAAAGGCTGA...CAGCAAGATCAACAGAGAAGGTGGGTGATTTCTGCATTTCCAACTGAGGTACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR CAA 72 bp ATTCATCAAACTCATTCTCTGTCCAGTTTTGTTTCCTaGCTGGCGTGGAATTGTGATCCTTTGTGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: IHQTHSLSSFVS*LAWNCDPLWEK
Trigger: CTTCTCCCACAAAGGATCACAATTCCACGCCAGCAAGGAAACAAAACTGGACAGAGAATGAGTTTGATGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR TCA 90 bp CTTCTTTGCATTGAGTTAGGACATGCTCCTTTAGCTCAGAGGAGTTTGATATTAGCACACATGGACCAGTaGTGTTGTACTTCCACTGAA +
Preference number: 4 (lower is better)
Translates to: LLCIELGHAPLAQRSLILAHMDQ*CCTSTE
Trigger: TTCAGTGGAAGTACAACATCACTGGTCCATGTGTGC...TAATATCAAACTCCTCTGAGCTAAAGGAGCATGTCCTAACTCAATGCAAAGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR TCA 90 bp CTTCTTTGCATTGAGTTAGGACATGCTCCTTTAGCTCAGAGGAGTTTGATATTAAAGTGCTGGTCTGGATaGAGCTGCACAAAGCAAAGA +
Preference number: 4 (lower is better)
Translates to: LLCIELGHAPLAQRSLILKCWSG*SCTKQR
Trigger: TCTTTGCTTTGTGCAGCTTCATCCAGACCAGCACTT...TAATATCAAACTCCTCTGAGCTAAAGGAGCATGTCCTAACTCAATGCAAAGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR TCA 90 bp CTTCTTTGCATTGAGTTAGGACATGCTCCTTTAGCTCAGAGGAGTTTGATATTATTTCTTTATCTTGCCTaGTTGCCCTGGCCAGCACTT +
Preference number: 4 (lower is better)
Translates to: LLCIELGHAPLAQRSLILFLYLA*LPWPAL
Trigger: AAGTGCTGGCCAGGGCAATCAGGCAAGATAAAGAAA...TAATATCAAACTCCTCTGAGCTAAAGGAGCATGTCCTAACTCAATGCAAAGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR TCA 90 bp AGGTACCTCAGTTGGAAATGCAGAAATCACCCACCTTCTCTGTTGATCTTGCTGGATTCTTCATATCCATaGGCATGGAATGTTTTTCCA +
Preference number: 4 (lower is better)
Translates to: RYLSWKCRNHPPSLLILLDSSYP*AWNVFP
Trigger: TGGAAAAACATTCCATGCTCATGGATATGAAGAATC...CAGCAAGATCAACAGAGAAGGTGGGTGATTTCTGCATTTCCAACTGAGGTACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR GCA 90 bp GTTCTCGTGCTGTGTTTTTCAGCTCCATCAGGTTATTTATGTTCTCTTCAAACCATGCAGTATACCAGGTaGCAAACAGGTGGTGGAAAA +
Preference number: 4 (lower is better)
Translates to: VLVLCFSAPSGYLCSLQTMQYTR*QTGGGK
Trigger: TTTTCCACCACCTGTTTGGCACCTGGTATACTGCAT...GGTTTGAAGAGAACATAAATAACCTGATGGAGCTGAAAAACACAGCACGAGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR GCA 90 bp GACTCTATCCAATTTGCCAGTCTGTGGCTTTTAACTGGGGCTTTCAGCCCATTTATTTTAGATCTTTCCTaGTTTCTCTTGTGGGCCTTT +
Preference number: 4 (lower is better)
Translates to: DSIQFASLWLLTGAFSPFILDLS*FLLWAF
Trigger: AAAGGCCCACAAGAGAAAGCAGGAAAGATCTAAAAT...AAATGGGCTGAAAGCCCCAGTTAAAAGCCACAGACTGGCAAATTGGATAGAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR CCA 90 bp CTTCTTTGCATTGAGTTAGGACATGCTCCTTTAGCTCAGAGGAGTTTGATATTATCTAGAGAGGCAGTCTaGCTACAGAGGTTTTGCAGT +
Preference number: 4 (lower is better)
Translates to: LLCIELGHAPLAQRSLILSREAV*LQRFCS
Trigger: ACTGCAAAACCTCTGTAGCCAGACTGCCTCTCTAGA...TAATATCAAACTCCTCTGAGCTAAAGGAGCATGTCCTAACTCAATGCAAAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR CAA 72 bp ATTGGTTTTTCCTCACCATCATGCATTTATCTACCTTaGGTCTTTGATGTTGGTGGTGGAGTTTCTGAGTGG +
Preference number: 4 (lower is better)
Translates to: IGFSSPSCIYLP*VFDVGGGVSEW
Trigger: CCACTCAGAAACTCCACCACCAACATCAAAGACCAAAGGTAGATAAATGCATGATGGTGAGGAAAAACCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR CAA 72 bp TTGGTTCTGTTTATGAGATGGGTTACGTTTATTGATTaGCGTATGTTAAGCCAGCCTTGCATCCCAGGGATA +
Preference number: 4 (lower is better)
Translates to: LVLFMRWVTFID*RMLSQPCIPGI
Trigger: TATCCCTGGGATGCAAGGCTGGCTTAACATACGCAAATCAATAAACGTAACCCATCTCATAAACAGAACCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR TCA 90 bp AATTACTTCCATCAATTCATCAAACTCATTCTCTGTCCAGTTTTGTTTCCTTGCGGTCAAGGACCCACTTaGTGCAGGAGTCTATCTCTT +
Preference number: 4 (lower is better)
Translates to: NYFHQFIKLILCPVLFPCGQGPT*CRSLSL
Trigger: AAGAGATAGACTCCTGCATCAAGTGGGTCCTTGACC...GCAAGGAAACAAAACTGGACAGAGAATGAGTTTGATGAATTGATGGAAGTAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR TCA 90 bp GTTCTCGTGCTGTGTTTTTCAGCTCCATCAGGTTATTTATGTTCTCTTCAAACCGGAGTTTCTCCTGGATaGTATCCTGAAGAGTGTTTT +
Preference number: 4 (lower is better)
Translates to: VLVLCFSAPSGYLCSLQTGVSPG*YPEECF
Trigger: AAAACACTCTTCAGGATATCATCCAGGAGAAACTCC...GGTTTGAAGAGAACATAAATAACCTGATGGAGCTGAAAAACACAGCACGAGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR TCA 90 bp AATTACTTCCATCAATTCATCAAACTCATTCTCTGTCCAGTTTTGTTTCCTTGCGGGGGTTGCTCTTCTTaGGGTGTATCTTTGTGGTGT +
Preference number: 4 (lower is better)
Translates to: NYFHQFIKLILCPVLFPCGGCSS*GVSLWC
Trigger: ACACCACAAAGATACACCTCAAGAAGAGCAACCCCC...GCAAGGAAACAAAACTGGACAGAGAATGAGTTTGATGAATTGATGGAAGTAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR GCA 90 bp GACTCTATCCAATTTGCCAGTCTGTGGCTTTTAACTGGGGCTTTCAGCCCATTTTATCTCCTTCAGTTCTaGTCTGATCTTAGTTATTTC +
Preference number: 4 (lower is better)
Translates to: DSIQFASLWLLTGAFSPFYLLQF*SDLSYF
Trigger: GAAATAACTAAGATCAGAGCAGAACTGAAGGAGATA...AAATGGGCTGAAAGCCCCAGTTAAAAGCCACAGACTGGCAAATTGGATAGAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR GCA 90 bp CTTCTTTGCATTGAGTTAGGACATGCTCCTTTAGCTCAGAGGAGTTTGATATTATTTATCTTGCCTGATTaGCCTGGCCAGCACTTTCAA +
Preference number: 4 (lower is better)
Translates to: LLCIELGHAPLAQRSLILFILPD*PGQHFQ
Trigger: TTGAAAGTGCTGGCCAGGGCAATCAGGCAAGATAAA...TAATATCAAACTCCTCTGAGCTAAAGGAGCATGTCCTAACTCAATGCAAAGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR CCA 90 bp CTTCTTTGCATTGAGTTAGGACATGCTCCTTTAGCTCAGAGGAGTTTGATATTATCTGCTTTCTGCATATaGCTAGCCAGTTTTCCCAAC +
Preference number: 4 (lower is better)
Translates to: LLCIELGHAPLAQRSLILSAFCI*LASFPN
Trigger: GTTGGGAAAACTGGCTAGCCATATGCAGAAAGCAGA...TAATATCAAACTCCTCTGAGCTAAAGGAGCATGTCCTAACTCAATGCAAAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR TCA 90 bp AATTACTTCCATCAATTCATCAAACTCATTCTCTGTCCAGTTTTGTTTCCTTGCTGCTTGGTCCAGAGCTaGGTTCAAGTCCTGAATATC +
Preference number: 4 (lower is better)
Translates to: NYFHQFIKLILCPVLFPCCLVQS*VQVLNI
Trigger: GATATTCAGGACTTGAACTCAGCTCTGGACCAAGCA...GCAAGGAAACAAAACTGGACAGAGAATGAGTTTGATGAATTGATGGAAGTAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR GCA 90 bp CTTCTTTGCATTGAGTTAGGACATGCTCCTTTAGCTCAGAGGAGTTTGATATTAGGATGCCAAGAAGTTTaGCAGCATTTTAGGAGTGAT +
Preference number: 4 (lower is better)
Translates to: LLCIELGHAPLAQRSLILGCQEV*QHFRSD
Trigger: ATCACTCCTAAAATGCTGGCAAACTTCTTGGCATCC...TAATATCAAACTCCTCTGAGCTAAAGGAGCATGTCCTAACTCAATGCAAAGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR GCA 90 bp GTTCTCGTGCTGTGTTTTTCAGCTCCATCAGGTTATTTATGTTCTCTTCAAACCACTTCCACTGAAATATaGCAACACAATGAAGCAGAC +
Preference number: 4 (lower is better)
Translates to: VLVLCFSAPSGYLCSLQTTSTEI*QHNEAD
Trigger: GTCTGCTTCATTGTGTTGGCATATTTCAGTGGAAGT...GGTTTGAAGAGAACATAAATAACCTGATGGAGCTGAAAAACACAGCACGAGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR GCA 90 bp CTTCTTTGCATTGAGTTAGGACATGCTCCTTTAGCTCAGAGGAGTTTGATATTATACCTCAGTTGGAAATaGAGAAATCACCCACCTTCT +
Preference number: 4 (lower is better)
Translates to: LLCIELGHAPLAQRSLILYLSWK*RNHPPS
Trigger: AGAAGGTGGGTGATTTCTGCATTTCCAACTGAGGTA...TAATATCAAACTCCTCTGAGCTAAAGGAGCATGTCCTAACTCAATGCAAAGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR GCA 90 bp AATTACTTCCATCAATTCATCAAACTCATTCTCTGTCCAGTTTTGTTTCCTTGCATGTTAAGCCAGCCTTaGATCCCAGGGATAAAGCCA +
Preference number: 4 (lower is better)
Translates to: NYFHQFIKLILCPVLFPCMLSQP*IPGIKP
Trigger: TGGCTTTATCCCTGGGATGCAAGGCTGGCTTAACAT...GCAAGGAAACAAAACTGGACAGAGAATGAGTTTGATGAATTGATGGAAGTAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR CCA 90 bp CTTCTTTGCATTGAGTTAGGACATGCTCCTTTAGCTCAGAGGAGTTTGATATTACCTGAATTTGAATGTTaGCCTGTCTTGTTAGGTTGG +
Preference number: 4 (lower is better)
Translates to: LLCIELGHAPLAQRSLILPEFEC*PVLLGW
Trigger: CCAACCTAACAAGACAGGCCAACATTCAAATTCAGG...TAATATCAAACTCCTCTGAGCTAAAGGAGCATGTCCTAACTCAATGCAAAGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR CAA 72 bp TTCCATCAATTCATCAAACTCATTCTCTGTCCAGTTTaGTTTCCTTGCTGGCGTGGAATTGTGATCCTTTGT +
Preference number: 4 (lower is better)
Translates to: FHQFIKLILCPV*FPCWRGIVILC
Trigger: ACAAAGGATCACAATTCCACGCCAGCAAGGAAACAAAACTGGACAGAGAATGAGTTTGATGAATTGATGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR TCA 90 bp CTTCTTTGCATTGAGTTAGGACATGCTCCTTTAGCTCAGAGGAGTTTGATATTAGTAGATGTGTGGTTTTaGGTGAGTTTCTTAATCCTG +
Preference number: 4 (lower is better)
Translates to: LLCIELGHAPLAQRSLILVDVWF*VSFLIL
Trigger: CAGGATTAAGAAACTCACTCAAAACCACACATCTAC...TAATATCAAACTCCTCTGAGCTAAAGGAGCATGTCCTAACTCAATGCAAAGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR TCA 90 bp GTTCTCGTGCTGTGTTTTTCAGCTCCATCAGGTTATTTATGTTCTCTTCAAACCCATTGGTTCTGTTTATaGGATGGGTTACGTTTATTG +
Preference number: 4 (lower is better)
Translates to: VLVLCFSAPSGYLCSLQTHWFCL*DGLRLL
Trigger: CAATAAACGTAACCCATCTCATAAACAGAACCAATG...GGTTTGAAGAGAACATAAATAACCTGATGGAGCTGAAAAACACAGCACGAGAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR GCA 90 bp AATTACTTCCATCAATTCATCAAACTCATTCTCTGTCCAGTTTTGTTTCCTTGCACCCATAAGGAGAGATaGTTTTCCTGGATGCCAAGA +
Preference number: 4 (lower is better)
Translates to: NYFHQFIKLILCPVLFPCTHKER*FSWMPR
Trigger: TCTTGGCATCCAGGAAAAGCATCTCTCCTTATGGGT...GCAAGGAAACAAAACTGGACAGAGAATGAGTTTGATGAATTGATGGAAGTAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR GCA 90 bp GTTCTCGTGCTGTGTTTTTCAGCTCCATCAGGTTATTTATGTTCTCTTCAAACCAATGCGTCCAGTTTTTaGCCATTCAGTATGATATTG +
Preference number: 4 (lower is better)
Translates to: VLVLCFSAPSGYLCSLQTNASSF*PFSMIL
Trigger: CAATATCATACTGAATGGGCAAAAACTGGACGCATT...GGTTTGAAGAGAACATAAATAACCTGATGGAGCTGAAAAACACAGCACGAGAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR GCA 90 bp GTTCTCGTGCTGTGTTTTTCAGCTCCATCAGGTTATTTATGTTCTCTTCAAACCTACAATCATGTCATCTaGAAACAGAGACGATTTGAC +
Preference number: 4 (lower is better)
Translates to: VLVLCFSAPSGYLCSLQTYNHVI*KQRRFD
Trigger: GTCAAATCGTCTCTGTTTGCAGATGACATGATTGTA...GGTTTGAAGAGAACATAAATAACCTGATGGAGCTGAAAAACACAGCACGAGAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR GCA 90 bp GTTCTCGTGCTGTGTTTTTCAGCTCCATCAGGTTATTTATGTTCTCTTCAAACCGAATCCTTTCCTCATTaGTTGTTTTTGTCAGGTTTG +
Preference number: 4 (lower is better)
Translates to: VLVLCFSAPSGYLCSLQTESFPH*LFLSGL
Trigger: CAAACCTGACAAAAACAAGCAATGAGGAAAGGATTC...GGTTTGAAGAGAACATAAATAACCTGATGGAGCTGAAAAACACAGCACGAGAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR CCA 90 bp AATTACTTCCATCAATTCATCAAACTCATTCTCTGTCCAGTTTTGTTTCCTTGCCAATTTGCCAGTCTGTaGCTTTTAACTGGGGCTTTC +
Preference number: 4 (lower is better)
Translates to: NYFHQFIKLILCPVLFPCQFASL*LLTGAF
Trigger: GAAAGCCCCAGTTAAAAGCCACAGACTGGCAAATTG...GCAAGGAAACAAAACTGGACAGAGAATGAGTTTGATGAATTGATGGAAGTAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR CAA 72 bp GATGTTGGTGGTGGAGTTTCTGAGTGGACGTCCTTTTaGTTGATATTGATGCTATTCCTTAGTTTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: DVGGGVSEWTSF*LILMLFLSFPF
Trigger: AAAAGGAAAACTAAGGAATAGCATCAATATCAACAAAAAGGACGTCCACTCAGAAACTCCACCACCAACATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR CAA 72 bp TGGCAGTTCATTCGATTTGGCTCTGTTTGTCTGTTATaGGTGTATAGGAATGCTTGTGATTTTTGCACATTG +
Preference number: 4 (lower is better)
Translates to: WQFIRFGSVCLL*VYRNACDFCTL
Trigger: CAATGTGCAAAAATCACAAGCATTCCTATACACCAATAACAGACAAACAGAGCCAAATCGAATGAACTGCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR TCA 90 bp CTTCTTTGCATTGAGTTAGGACATGCTCCTTTAGCTCAGAGGAGTTTGATATTACCTCTCTTATTTCCTTaGGCACTAATTTGTAGTTCT +
Preference number: 4 (lower is better)
Translates to: LLCIELGHAPLAQRSLILPLLFP*ALICSS
Trigger: AGAACTACAAATTAGTGCTCAAGGAAATAAGAGAGG...TAATATCAAACTCCTCTGAGCTAAAGGAGCATGTCCTAACTCAATGCAAAGAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR GCA 90 bp AATTACTTCCATCAATTCATCAAACTCATTCTCTGTCCAGTTTTGTTTCCTTGCATACACATGCTCTGCTaGCAAGTAGCTTCTAATACC +
Preference number: 4 (lower is better)
Translates to: NYFHQFIKLILCPVLFPCIHMLC*QVASNT
Trigger: GGTATTAGAAGCTACTTGGCAGCAGAGCATGTGTAT...GCAAGGAAACAAAACTGGACAGAGAATGAGTTTGATGAATTGATGGAAGTAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR GCA 90 bp CTTCTTTGCATTGAGTTAGGACATGCTCCTTTAGCTCAGAGGAGTTTGATATTAAACTTCAGACTGCTATaGTTGCAGGAAGAATTTCAA +
Preference number: 4 (lower is better)
Translates to: LLCIELGHAPLAQRSLILNFRLL*LQEEFQ
Trigger: TTGAAATTCTTCCTGCAAGCATAGCAGTCTGAAGTT...TAATATCAAACTCCTCTGAGCTAAAGGAGCATGTCCTAACTCAATGCAAAGAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR CCA 90 bp AATTACTTCCATCAATTCATCAAACTCATTCTCTGTCCAGTTTTGTTTCCTTGCAATGTGAGGCACACATaGACCAGTGATGTTGTACTT +
Preference number: 4 (lower is better)
Translates to: NYFHQFIKLILCPVLFPCNVRHT*TSDVVL
Trigger: AAGTACAACATCACTGGTCCATGTGTGCCTCACATT...GCAAGGAAACAAAACTGGACAGAGAATGAGTTTGATGAATTGATGGAAGTAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR CCA 90 bp GTTCTCGTGCTGTGTTTTTCAGCTCCATCAGGTTATTTATGTTCTCTTCAAACCAACTCTATGCATAAATaGCCTAAACACACAGATAAG +
Preference number: 4 (lower is better)
Translates to: VLVLCFSAPSGYLCSLQTNSMHK*PKHTDK
Trigger: CTTATCTGTGTGTTTAGGCCATTTATGCATAGAGTT...GGTTTGAAGAGAACATAAATAACCTGATGGAGCTGAAAAACACAGCACGAGAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR CCA 90 bp GTTCTCGTGCTGTGTTTTTCAGCTCCATCAGGTTATTTATGTTCTCTTCAAACCTTACTGCCTCAATTTTaGGACTTGTTTTTGGTCTAT +
Preference number: 4 (lower is better)
Translates to: VLVLCFSAPSGYLCSLQTLLPQF*DLFLVY
Trigger: ATAGACCAAAAACAAGTCCCAAAATTGAGGCAGTAA...GGTTTGAAGAGAACATAAATAACCTGATGGAGCTGAAAAACACAGCACGAGAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR GCA 90 bp CTTCTTTGCATTGAGTTAGGACATGCTCCTTTAGCTCAGAGGAGTTTGATATTAATCCATTTCATTAGGTaGTATCTTATTGTCTCCATG +
Preference number: 4 (lower is better)
Translates to: LLCIELGHAPLAQRSLILIHFIR*YLIVSM
Trigger: CATGGAGACAATAAGATAGCACCTAATGAAATGGAT...TAATATCAAACTCCTCTGAGCTAAAGGAGCATGTCCTAACTCAATGCAAAGAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR GCA 90 bp AATTACTTCCATCAATTCATCAAACTCATTCTCTGTCCAGTTTTGTTTCCTTGCATTGATGCTTGTGTATaGTTCATGAAGTTCTCGTGC +
Preference number: 4 (lower is better)
Translates to: NYFHQFIKLILCPVLFPCIDACV*FMKFSC
Trigger: GCACGAGAACTTCATGAAGCATACACAAGCATCAAT...GCAAGGAAACAAAACTGGACAGAGAATGAGTTTGATGAATTGATGGAAGTAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR GCA 90 bp CTTCTTTGCATTGAGTTAGGACATGCTCCTTTAGCTCAGAGGAGTTTGATATTACTTTATGAATTTGGGTaGTCTTGTATTGGGTACATA +
Preference number: 4 (lower is better)
Translates to: LLCIELGHAPLAQRSLILLYEFG*SCIGYI
Trigger: TATGTACCCAATACAAGAGCACCCAAATTCATAAAG...TAATATCAAACTCCTCTGAGCTAAAGGAGCATGTCCTAACTCAATGCAAAGAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR GCA 90 bp CTTCTTTGCATTGAGTTAGGACATGCTCCTTTAGCTCAGAGGAGTTTGATATTAGTTGAGATAAACATGTaGTTTTGTCATTGGTTCTGT +
Preference number: 4 (lower is better)
Translates to: LLCIELGHAPLAQRSLILVEINM*FCHWFC
Trigger: ACAGAACCAATGACAAAAGCACATGTTTATCTCAAC...TAATATCAAACTCCTCTGAGCTAAAGGAGCATGTCCTAACTCAATGCAAAGAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR TCA 90 bp AATTACTTCCATCAATTCATCAAACTCATTCTCTGTCCAGTTTTGTTTCCTTGCCAAACAGAGACGATTTaGCTTCCTCTTTTCCTATTT +
Preference number: 4 (lower is better)
Translates to: NYFHQFIKLILCPVLFPCQTETI*LPLFLF
Trigger: AAATAGGAAAAGAGGAAGTCAAATCGTCTCTGTTTG...GCAAGGAAACAAAACTGGACAGAGAATGAGTTTGATGAATTGATGGAAGTAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR GCA 90 bp AATTACTTCCATCAATTCATCAAACTCATTCTCTGTCCAGTTTTGTTTCCTTGCAATATACACATGCTCTaGTGCCAAGTAGCTTCTAAT +
Preference number: 4 (lower is better)
Translates to: NYFHQFIKLILCPVLFPCNIHML*CQVASN
Trigger: ATTAGAAGCTACTTGGCAGCAGAGCATGTGTATATT...GCAAGGAAACAAAACTGGACAGAGAATGAGTTTGATGAATTGATGGAAGTAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR CAA 72 bp AAATCTAAAAATTTGTGTGACACTTTACTGCGTCAGTaGCTTTATTGTAGTGATCTAGAAGAGAACCCACAG +
Preference number: 4 (lower is better)
Translates to: KSKNLCDTLLRQ*LYCSDLEENPQ
Trigger: CTGTGGGTTCTCTTCTAGATCACTACAATAAAGCAACTGACGCAGTAAAGTGTCACACAAATTTTTAGATTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR CAA 72 bp AAATGCAATGTGGTGCTGAGAATAATGTATATTCTATaGATTTGGGGTGTAGAGTTCTGTAGAGGTCTATTA +
Preference number: 4 (lower is better)
Translates to: KCNVVLRIMYIL*IWGVEFCRGLL
Trigger: TAATAGACCTCTACAGAACTCTACACCCCAAATCAATAGAATATACATTATTCTCAGCACCACATTGCATTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641320.1
3UTR CAA 72 bp TATCTCCTTCAGTTCTGCTCTGATCTTAGTTATTTCTaGTCTTCTGAGGCTTTTGAATTTGTTTGTTCTTGT +
Preference number: 4 (lower is better)
Translates to: YLLQFCSDLSYF*SSEAFEFVCSC
Trigger: ACAAGAACAAACAAATTCAAAAGCCTCAGAAGACAAGAAATAACTAAGATCAGAGCAGAACTGAAGGAGATA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR CAA 90 bp TGCCACTGGGGTATGAAGAAAACTCCTGCAGCTAGCTCAGTGCCTGCCCAAACACACCCACCTTCTCTGTaGATCTTGCTGGGAGCAGCA +
Preference number: 5 (lower is better)
Translates to: CHWGMKKTPAASSVPAQTHPPSL*ILLGAA
Trigger: TGCTGCTCCCAGCAAGATCAACAGAGAAGGTGGGTG...TGTTTGGGCAGGCACTGAGCTAGCTGCAGGAGTTTTCTTCATACCCCAGTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR CAA 90 bp TGCCACTGGGGTATGAAGAAAACTCCTGCAGCTAGCTCAGTGCCTGCCCAAACAGGGTCAAGGACCCACTaGATGCAGGAGTCTATCTCT +
Preference number: 5 (lower is better)
Translates to: CHWGMKKTPAASSVPAQTGSRTH*MQESIS
Trigger: AGAGATAGACTCCTGCATCAAGTGGGTCCTTGACCC...TGTTTGGGCAGGCACTGAGCTAGCTGCAGGAGTTTTCTTCATACCCCAGTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR CAA 90 bp AGTTTGCCAACCCTTTGTGCTTCCCGGGTGAAGCAACACCCCACCCTGCTTCTGTCCTATTTGACCATCTaGCCAGCCACCAAACATAAC +
Preference number: 5 (lower is better)
Translates to: SLPTLCASRVKQHPTLLLSYLTI*PATKHN
Trigger: GTTATGTTTGGTGGCTGGCAAGATGGTCAAATAGGA...CAGAAGCAGGGTGGGGTGTTGCTTCACCCGGGAAGCACAAAGGGTTGGCAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR CAA 90 bp AGTTTGCCAACCCTTTGTGCTTCCCGGGTGAAGCAACACCCCACCCTGCTTCTGTTCAGACTGCTATGCTaGCAGGAAGAATTTCAAGCC +
Preference number: 5 (lower is better)
Translates to: SLPTLCASRVKQHPTLLLFRLLC*QEEFQA
Trigger: GGCTTGAAATTCTTCCTGCAAGCATAGCAGTCTGAA...CAGAAGCAGGGTGGGGTGTTGCTTCACCCGGGAAGCACAAAGGGTTGGCAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR CAA 90 bp TGCCACTGGGGTATGAAGAAAACTCCTGCAGCTAGCTCAGTGCCTGCCCAAACACTTCCTGGATTAGACTaGGGAGGGTGTGTGTTTCCA +
Preference number: 5 (lower is better)
Translates to: CHWGMKKTPAASSVPAQTLPGLD*GGCVFP
Trigger: TGGAAACACACACCCTCCCAAGTCTAATCCAGGAAG...TGTTTGGGCAGGCACTGAGCTAGCTGCAGGAGTTTTCTTCATACCCCAGTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR CAA 90 bp AGGTACCTCAGTTGGAAATGCAGAAATCACCCACCTTCTCTGTTGATCTTGCTGCACTCCAGACCCTGTTaGCCTGCGAAGGCTGCAGAA +
Preference number: 5 (lower is better)
Translates to: RYLSWKCRNHPPSLLILLHSRPC*PAKAAE
Trigger: TTCTGCAGCCTTCGCAGGCAAACAGGGTCTGGAGTG...CAGCAAGATCAACAGAGAAGGTGGGTGATTTCTGCATTTCCAACTGAGGTACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR CAA 90 bp AGTTTGCCAACCCTTTGTGCTTCCCGGGTGAAGCAACACCCCACCCTGCTTCTGTTTTCTTTAAGACTGTaGGATATTGGCCCCCACTCA +
Preference number: 5 (lower is better)
Translates to: SLPTLCASRVKQHPTLLLFSLRL*DIGPHS
Trigger: TGAGTGGGGGCCAATATCCAACAGTCTTAAAGAAAA...CAGAAGCAGGGTGGGGTGTTGCTTCACCCGGGAAGCACAAAGGGTTGGCAAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR CAA 90 bp AGTTTGCCAACCCTTTGTGCTTCCCGGGTGAAGCAACACCCCACCCTGCTTCTGACTGGCTTTATGAATTaGGGTGCTCTTGTATTGGGT +
Preference number: 5 (lower is better)
Translates to: SLPTLCASRVKQHPTLLLTGFMN*GALVLG
Trigger: ACCCAATACAAGAGCACCCAAATTCATAAAGCCAGT...CAGAAGCAGGGTGGGGTGTTGCTTCACCCGGGAAGCACAAAGGGTTGGCAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR CAA 90 bp AGTTTGCCAACCCTTTGTGCTTCCCGGGTGAAGCAACACCCCACCCTGCTTCTGTGTTCATCAGGGATATaGGCCTGGCATGTTCTTTTT +
Preference number: 5 (lower is better)
Translates to: SLPTLCASRVKQHPTLLLCSSGI*AWHVLF
Trigger: AAAAAGAACATGCCAGGCCAATATCCCTGATGAACA...CAGAAGCAGGGTGGGGTGTTGCTTCACCCGGGAAGCACAAAGGGTTGGCAAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR CAA 90 bp AGGTACCTCAGTTGGAAATGCAGAAATCACCCACCTTCTCTGTTGATCTTGCTGCAGGTCTGCTGGAGTTaGCTGGAGATCCACTCCAGA +
Preference number: 5 (lower is better)
Translates to: RYLSWKCRNHPPSLLILLQVCWS*LEIHSR
Trigger: TCTGGAGTGGATCTCCAGCAAACTCCAGCAGACCTG...CAGCAAGATCAACAGAGAAGGTGGGTGATTTCTGCATTTCCAACTGAGGTACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR CAA 90 bp AGTTTGCCAACCCTTTGTGCTTCCCGGGTGAAGCAACACCCCACCCTGCTTCTGTTCAGCCTTTTTGCATaGGTTTTTCCTCACCATCAT +
Preference number: 5 (lower is better)
Translates to: SLPTLCASRVKQHPTLLLFSLFA*VFPHHH
Trigger: ATGATGGTGAGGAAAAACCAATGCAAAAAGGCTGAA...CAGAAGCAGGGTGGGGTGTTGCTTCACCCGGGAAGCACAAAGGGTTGGCAAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR CAA 90 bp ACCAGTCCCAATGAGATGAGCCAGGTACCTCAGTTGGAAATGCAGAAATCACCCTATGTTAAGCCAGCCTaGCATCCCAGGGATAAAGCC +
Preference number: 5 (lower is better)
Translates to: TSPNEMSQVPQLEMQKSPYVKPA*HPRDKA
Trigger: GGCTTTATCCCTGGGATGCAAGGCTGGCTTAACATA...GGGTGATTTCTGCATTTCCAACTGAGGTACCTGGCTCATCTCATTGGGACTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR CAA 90 bp AGTTTGCCAACCCTTTGTGCTTCCCGGGTGAAGCAACACCCCACCCTGCTTCTGCCTCATTGCTTGTTTTaGTCAGGTTTGTCAAAGATC +
Preference number: 5 (lower is better)
Translates to: SLPTLCASRVKQHPTLLLPHCLF*SGLSKI
Trigger: GATCTTTGACAAACCTGACAAAAACAAGCAATGAGG...CAGAAGCAGGGTGGGGTGTTGCTTCACCCGGGAAGCACAAAGGGTTGGCAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR CAA 90 bp GACTCTATCCAATTTGCCAGTCTGTGGCTTTTAACTGGGGCTTTCAGCCCATTTCTGCCACCTGAGGACTaGATGCTCAACACAGTGATG +
Preference number: 5 (lower is better)
Translates to: DSIQFASLWLLTGAFSPFLPPED*MLNTVM
Trigger: CATCACTGTGTTGAGCATCAAGTCCTCAGGTGGCAG...AAATGGGCTGAAAGCCCCAGTTAAAAGCCACAGACTGGCAAATTGGATAGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR CAA 90 bp AGTTTGCCAACCCTTTGTGCTTCCCGGGTGAAGCAACACCCCACCCTGCTTCTGAATTTTCACCTCTTCTaGAAGATAGAGCCTCAAAGA +
Preference number: 5 (lower is better)
Translates to: SLPTLCASRVKQHPTLLLNFHLF*KIEPQR
Trigger: TCTTTGAGGCTCTATCTTCAAGAAGAGGTGAAAATT...CAGAAGCAGGGTGGGGTGTTGCTTCACCCGGGAAGCACAAAGGGTTGGCAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR CAA 90 bp TGCCACTGGGGTATGAAGAAAACTCCTGCAGCTAGCTCAGTGCCTGCCCAAACAATCTACCTTTGGTCTTaGATGTTGGTGGTGGAGTTT +
Preference number: 5 (lower is better)
Translates to: CHWGMKKTPAASSVPAQTIYLWS*MLVVEF
Trigger: AAACTCCACCACCAACATCAAAGACCAAAGGTAGAT...TGTTTGGGCAGGCACTGAGCTAGCTGCAGGAGTTTTCTTCATACCCCAGTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR CAA 90 bp AGTTTGCCAACCCTTTGTGCTTCCCGGGTGAAGCAACACCCCACCCTGCTTCTGTTAGCTCAGAGGAGTTaGATATTACCCAATTCTTCT +
Preference number: 5 (lower is better)
Translates to: SLPTLCASRVKQHPTLLLLAQRS*ILPNSS
Trigger: AGAAGAATTGGGTAATATCAAACTCCTCTGAGCTAA...CAGAAGCAGGGTGGGGTGTTGCTTCACCCGGGAAGCACAAAGGGTTGGCAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR CAA 90 bp ACCAGTCCCAATGAGATGAGCCAGGTACCTCAGTTGGAAATGCAGAAATCACCCAGAGTGTTTTCCAAGTaGGTTCCATTCTCCCCCTCA +
Preference number: 5 (lower is better)
Translates to: TSPNEMSQVPQLEMQKSPRVFSK*VPFSPS
Trigger: TGAGGGGGAGAATGGAACCAACTTGGAAAACACTCT...GGGTGATTTCTGCATTTCCAACTGAGGTACCTGGCTCATCTCATTGGGACTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR CAA 90 bp AGTTTGCCAACCCTTTGTGCTTCCCGGGTGAAGCAACACCCCACCCTGCTTCTGATGTATTTCCTGAATTaGAATGTTGGCCTGTCTTGT +
Preference number: 5 (lower is better)
Translates to: SLPTLCASRVKQHPTLLLMYFLN*NVGLSC
Trigger: ACAAGACAGGCCAACATTCAAATTCAGGAAATACAT...CAGAAGCAGGGTGGGGTGTTGCTTCACCCGGGAAGCACAAAGGGTTGGCAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR CAA 90 bp AGGTACCTCAGTTGGAAATGCAGAAATCACCCACCTTCTCTGTTGATCTTGCTGCAAGTGGAGAATGTTTaGCTTCTGCCACCTGAGGAC +
Preference number: 5 (lower is better)
Translates to: RYLSWKCRNHPPSLLILLQVENV*LLPPED
Trigger: GTCCTCAGGTGGCAGAAGCAAAACATTCTCCACTTG...CAGCAAGATCAACAGAGAAGGTGGGTGATTTCTGCATTTCCAACTGAGGTACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR CAA 90 bp GACTCTATCCAATTTGCCAGTCTGTGGCTTTTAACTGGGGCTTTCAGCCCATTTAGCCAGGTACCTCAGTaGGAAATGCAGAAATCACCC +
Preference number: 5 (lower is better)
Translates to: DSIQFASLWLLTGAFSPFSQVPQ*EMQKSP
Trigger: GGGTGATTTCTGCATTTCCAACTGAGGTACCTGGCT...AAATGGGCTGAAAGCCCCAGTTAAAAGCCACAGACTGGCAAATTGGATAGAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR CAA 90 bp TGCCACTGGGGTATGAAGAAAACTCCTGCAGCTAGCTCAGTGCCTGCCCAAACACTCATGAAGCTTAGTTaGGCTGAATATGAAACTCTG +
Preference number: 5 (lower is better)
Translates to: CHWGMKKTPAASSVPAQTLMKLS*AEYETL
Trigger: CAGAGTTTCATATTCAGCCAAACTAAGCTTCATGAG...TGTTTGGGCAGGCACTGAGCTAGCTGCAGGAGTTTTCTTCATACCCCAGTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR CAA 90 bp TGCCACTGGGGTATGAAGAAAACTCCTGCAGCTAGCTCAGTGCCTGCCCAAACATGTGATGTTAGGGTGTaGATTTTAGATCTTTCCTGC +
Preference number: 5 (lower is better)
Translates to: CHWGMKKTPAASSVPAQTCDVRV*ILDLSC
Trigger: GCAGGAAAGATCTAAAATCAACACCCTAACATCACA...TGTTTGGGCAGGCACTGAGCTAGCTGCAGGAGTTTTCTTCATACCCCAGTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR CAA 90 bp TGCCACTGGGGTATGAAGAAAACTCCTGCAGCTAGCTCAGTGCCTGCCCAAACAGGTCTATTCATGGATTaGACTTCTTCCTGGATTAGA +
Preference number: 5 (lower is better)
Translates to: CHWGMKKTPAASSVPAQTGLFMD*TSSWIR
Trigger: TCTAATCCAGGAAGAAGTCAAATCCATGAATAGACC...TGTTTGGGCAGGCACTGAGCTAGCTGCAGGAGTTTTCTTCATACCCCAGTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR CAA 90 bp AGGTACCTCAGTTGGAAATGCAGAAATCACCCACCTTCTCTGTTGATCTTGCTGATTCTCTGTCCAGTTTaGTTTCCTTGCTGGCGTGGA +
Preference number: 5 (lower is better)
Translates to: RYLSWKCRNHPPSLLILLILCPV*FPCWRG
Trigger: TCCACGCCAGCAAGGAAACAAAACTGGACAGAGAAT...CAGCAAGATCAACAGAGAAGGTGGGTGATTTCTGCATTTCCAACTGAGGTACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR CAA 90 bp AGGTACCTCAGTTGGAAATGCAGAAATCACCCACCTTCTCTGTTGATCTTGCTGGAATGTTGGCCTGTCTaGTTAGGTTGGGGAGTTTCT +
Preference number: 5 (lower is better)
Translates to: RYLSWKCRNHPPSLLILLECWPV*LGWGVS
Trigger: AGAAACTCCCCAACCTAACAAGACAGGCCAACATTC...CAGCAAGATCAACAGAGAAGGTGGGTGATTTCTGCATTTCCAACTGAGGTACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR CAA 90 bp AGGTACCTCAGTTGGAAATGCAGAAATCACCCACCTTCTCTGTTGATCTTGCTGTTATGTGTCTGGGGGTaGCTCTTCTTGAGGTGTATC +
Preference number: 5 (lower is better)
Translates to: RYLSWKCRNHPPSLLILLLCVWG*LFLRCI
Trigger: GATACACCTCAAGAAGAGCAACCCCCAGACACATAA...CAGCAAGATCAACAGAGAAGGTGGGTGATTTCTGCATTTCCAACTGAGGTACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR CAA 90 bp TGCCACTGGGGTATGAAGAAAACTCCTGCAGCTAGCTCAGTGCCTGCCCAAACATGTAGATGTGTGGTTTaGAGTGAGTTTCTTAATCCT +
Preference number: 5 (lower is better)
Translates to: CHWGMKKTPAASSVPAQTCRCVV*SEFLNP
Trigger: AGGATTAAGAAACTCACTCAAAACCACACATCTACA...TGTTTGGGCAGGCACTGAGCTAGCTGCAGGAGTTTTCTTCATACCCCAGTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR CAA 90 bp ACCAGTCCCAATGAGATGAGCCAGGTACCTCAGTTGGAAATGCAGAAATCACCCTTAGGTGCTATCTTATaGTCTCCATGTCCAAGGTTA +
Preference number: 5 (lower is better)
Translates to: TSPNEMSQVPQLEMQKSPLGAIL*SPCPRL
Trigger: TAACCTTGGACATGGAGACAATAAGATAGCACCTAA...GGGTGATTTCTGCATTTCCAACTGAGGTACCTGGCTCATCTCATTGGGACTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR CAA 90 bp ACCAGTCCCAATGAGATGAGCCAGGTACCTCAGTTGGAAATGCAGAAATCACCCGAATGCGTCCAGTTTTaGCCCATTCAGTATGATATT +
Preference number: 5 (lower is better)
Translates to: TSPNEMSQVPQLEMQKSPECVQF*PIQYDI
Trigger: AATATCATACTGAATGGGCAAAAACTGGACGCATTC...GGGTGATTTCTGCATTTCCAACTGAGGTACCTGGCTCATCTCATTGGGACTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS CCA 90 bp ACGATATTGGAGCCACAAAATGACAGCCTGAATGTGAGGCACACATaGACCAGTGATGTTGTACTTCCACTGAAATATGCCAACACAATG +
Preference number: 5 (lower is better)
Translates to: TILEPQNDSLNVRHT*TSDVVLPLKYANTM
Trigger: CATTGTGTTGGCATATTTCAGTGGAAGTACAACATCACTGGTCCATGTGTGCCTCACATTCAGGCTGTCATTTTGTGGCTCCAATATCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR CAA 90 bp CTTCTTTGCATTGAGTTAGGACATGCTCCTTTAGCTCAGAGGAGTTTGATATTATGGAGCATCTCCTATTaGACCATCTTGCCAGCCACC +
Preference number: 5 (lower is better)
Translates to: LLCIELGHAPLAQRSLILWSISY*TILPAT
Trigger: GGTGGCTGGCAAGATGGTCAAATAGGAGATGCTCCA...TAATATCAAACTCCTCTGAGCTAAAGGAGCATGTCCTAACTCAATGCAAAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR CAA 90 bp GTTCTCGTGCTGTGTTTTTCAGCTCCATCAGGTTATTTATGTTCTCTTCAAACCGAGCCTATGTATGCTTaGCACATGAGATCGGTCTCC +
Preference number: 5 (lower is better)
Translates to: VLVLCFSAPSGYLCSLQTEPMYA*HMRSVS
Trigger: GGAGACCGATCTCATGTGCAAAGCATACATAGGCTC...GGTTTGAAGAGAACATAAATAACCTGATGGAGCTGAAAAACACAGCACGAGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR CAA 90 bp AGGTACCTCAGTTGGAAATGCAGAAATCACCCACCTTCTCTGTTGATCTTGCTGGGCAGTTCATTCGATTaGGCTCTGTTTGTCTGTTAT +
Preference number: 5 (lower is better)
Translates to: RYLSWKCRNHPPSLLILLGSSFD*ALFVCY
Trigger: ATAACAGACAAACAGAGCCAAATCGAATGAACTGCC...CAGCAAGATCAACAGAGAAGGTGGGTGATTTCTGCATTTCCAACTGAGGTACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR CAA 90 bp GTTCTCGTGCTGTGTTTTTCAGCTCCATCAGGTTATTTATGTTCTCTTCAAACCTCTTTTTGCTTAGGATaGCCTGGGCTACATGGGCTG +
Preference number: 5 (lower is better)
Translates to: VLVLCFSAPSGYLCSLQTSFCLG*PGLHGL
Trigger: CAGCCCATGTAGCCCAGGCAATCCTAAGCAAAAAGA...GGTTTGAAGAGAACATAAATAACCTGATGGAGCTGAAAAACACAGCACGAGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR CAA 90 bp AGGTACCTCAGTTGGAAATGCAGAAATCACCCACCTTCTCTGTTGATCTTGCTGTCCTTTCCTCATTGCTaGTTTTTGTCAGGTTTGTCA +
Preference number: 5 (lower is better)
Translates to: RYLSWKCRNHPPSLLILLSFPHC*FLSGLS
Trigger: TGACAAACCTGACAAAAACAAGCAATGAGGAAAGGA...CAGCAAGATCAACAGAGAAGGTGGGTGATTTCTGCATTTCCAACTGAGGTACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR CAA 90 bp AGGTACCTCAGTTGGAAATGCAGAAATCACCCACCTTCTCTGTTGATCTTGCTGTGGACGTCCTTTTTGTaGATATTGATGCTATTCCTT +
Preference number: 5 (lower is better)
Translates to: RYLSWKCRNHPPSLLILLWTSFL*ILMLFL
Trigger: AAGGAATAGCATCAATATCAACAAAAAGGACGTCCA...CAGCAAGATCAACAGAGAAGGTGGGTGATTTCTGCATTTCCAACTGAGGTACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR CAA 90 bp CTTCTTTGCATTGAGTTAGGACATGCTCCTTTAGCTCAGAGGAGTTTGATATTACCAGCTTTGTTCTTTTaGCTTAGGATTGCCTGGGCT +
Preference number: 5 (lower is better)
Translates to: LLCIELGHAPLAQRSLILPALFF*LRIAWA
Trigger: AGCCCAGGCAATCCTAAGCAAAAAGAACAAAGCTGG...TAATATCAAACTCCTCTGAGCTAAAGGAGCATGTCCTAACTCAATGCAAAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR CAA 90 bp GTTCTCGTGCTGTGTTTTTCAGCTCCATCAGGTTATTTATGTTCTCTTCAAACCAGTCTCCCACTATTTTaGTGTGTTAGTCTAAGTCTC +
Preference number: 5 (lower is better)
Translates to: VLVLCFSAPSGYLCSLQTSLPLF*CVSLSL
Trigger: GAGACTTAGACTAACACACAAAAATAGTGGGAGACT...GGTTTGAAGAGAACATAAATAACCTGATGGAGCTGAAAAACACAGCACGAGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR CAA 90 bp GTTCTCGTGCTGTGTTTTTCAGCTCCATCAGGTTATTTATGTTCTCTTCAAACCAGAGATTCTGATACCTaGTGTCTTTGTTCTCATTGG +
Preference number: 5 (lower is better)
Translates to: VLVLCFSAPSGYLCSLQTRDSDT*CLCSHW
Trigger: CCAATGAGAACAAAGACACAAGGTATCAGAATCTCT...GGTTTGAAGAGAACATAAATAACCTGATGGAGCTGAAAAACACAGCACGAGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR CAA 90 bp AATTACTTCCATCAATTCATCAAACTCATTCTCTGTCCAGTTTTGTTTCCTTGCCTTTCCTGCTTTCTCTaGTGGGCCTTTAGTACTGTG +
Preference number: 5 (lower is better)
Translates to: NYFHQFIKLILCPVLFPCLSCFL*WAFSTV
Trigger: CACAGTACTAAAGGCCCACAAGAGAAAGCAGGAAAG...GCAAGGAAACAAAACTGGACAGAGAATGAGTTTGATGAATTGATGGAAGTAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR CAA 90 bp AATTACTTCCATCAATTCATCAAACTCATTCTCTGTCCAGTTTTGTTTCCTTGCTGGAATTGTGATCCTTaGTGGGAGAAGAGATGTCTG +
Preference number: 5 (lower is better)
Translates to: NYFHQFIKLILCPVLFPCWNCDP*WEKRCL
Trigger: CAGACATCTCTTCTCCCACAAAGGATCACAATTCCA...GCAAGGAAACAAAACTGGACAGAGAATGAGTTTGATGAATTGATGGAAGTAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR CAA 90 bp CTTCTTTGCATTGAGTTAGGACATGCTCCTTTAGCTCAGAGGAGTTTGATATTATCCTTCATTTCCACCTaGGTGAATCTGATGATTATG +
Preference number: 5 (lower is better)
Translates to: LLCIELGHAPLAQRSLILSFIST*VNLMIM
Trigger: CATAATCATCAGATTCACCAAGGTGGAAATGAAGGA...TAATATCAAACTCCTCTGAGCTAAAGGAGCATGTCCTAACTCAATGCAAAGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR CAA 90 bp CTTCTTTGCATTGAGTTAGGACATGCTCCTTTAGCTCAGAGGAGTTTGATATTAGTTACGTTTATTGATTaGCGTATGTTAAGCCAGCCT +
Preference number: 5 (lower is better)
Translates to: LLCIELGHAPLAQRSLILVTFID*RMLSQP
Trigger: AGGCTGGCTTAACATACGCAAATCAATAAACGTAAC...TAATATCAAACTCCTCTGAGCTAAAGGAGCATGTCCTAACTCAATGCAAAGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR CAA 90 bp AATTACTTCCATCAATTCATCAAACTCATTCTCTGTCCAGTTTTGTTTCCTTGCCTTTATTTCTTTATCTaGCCTGATTGCCCTGGCCAG +
Preference number: 5 (lower is better)
Translates to: NYFHQFIKLILCPVLFPCLYFFI*PDCPGQ
Trigger: CTGGCCAGGGCAATCAGGCAAGATAAAGAAATAAAG...GCAAGGAAACAAAACTGGACAGAGAATGAGTTTGATGAATTGATGGAAGTAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR CAA 90 bp CTTCTTTGCATTGAGTTAGGACATGCTCCTTTAGCTCAGAGGAGTTTGATATTAGCAAACAGAGACGATTaGACTTCCTCTTTTCCTATT +
Preference number: 5 (lower is better)
Translates to: LLCIELGHAPLAQRSLILANRDD*TSSFPI
Trigger: AATAGGAAAAGAGGAAGTCAAATCGTCTCTGTTTGC...TAATATCAAACTCCTCTGAGCTAAAGGAGCATGTCCTAACTCAATGCAAAGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR CAA 90 bp AATTACTTCCATCAATTCATCAAACTCATTCTCTGTCCAGTTTTGTTTCCTTGCTTGCTATCCATTTGCTaGGTAAATATTCCTCCATCC +
Preference number: 5 (lower is better)
Translates to: NYFHQFIKLILCPVLFPCLLSIC*VNIPPS
Trigger: GGATGGAGGAATATTTACCAAGCAAATGGATAGCAA...GCAAGGAAACAAAACTGGACAGAGAATGAGTTTGATGAATTGATGGAAGTAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR CAA 90 bp AATTACTTCCATCAATTCATCAAACTCATTCTCTGTCCAGTTTTGTTTCCTTGCTCATTCATGAGCAGGTaGTTCAGTTTCCATGTAGAT +
Preference number: 5 (lower is better)
Translates to: NYFHQFIKLILCPVLFPCSFMSR*FSFHVD
Trigger: ATCTACATGGAAACTGAACAACCTGCTCATGAATGA...GCAAGGAAACAAAACTGGACAGAGAATGAGTTTGATGAATTGATGGAAGTAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR CAA 90 bp AATTACTTCCATCAATTCATCAAACTCATTCTCTGTCCAGTTTTGTTTCCTTGCTTAGCACGAAGGGTGTaGAATTTTATCAAAGGCCTT +
Preference number: 5 (lower is better)
Translates to: NYFHQFIKLILCPVLFPCLARRV*NFIKGL
Trigger: AAGGCCTTTGATAAAATTCAACACCCTTCGTGCTAA...GCAAGGAAACAAAACTGGACAGAGAATGAGTTTGATGAATTGATGGAAGTAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR CAA 90 bp AATTACTTCCATCAATTCATCAAACTCATTCTCTGTCCAGTTTTGTTTCCTTGCTTGTATCCTGACATTTaGCTGAAGTTGCTTATCAGC +
Preference number: 5 (lower is better)
Translates to: NYFHQFIKLILCPVLFPCLYPDI*LKLLIS
Trigger: GCTGATAAGCAACTTCAGCAAAATGTCAGGATACAA...GCAAGGAAACAAAACTGGACAGAGAATGAGTTTGATGAATTGATGGAAGTAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR CAA 90 bp AATTACTTCCATCAATTCATCAAACTCATTCTCTGTCCAGTTTTGTTTCCTTGCTTCTGTTTGATCGATTaGGCTATTGATGCTTGTGTA +
Preference number: 5 (lower is better)
Translates to: NYFHQFIKLILCPVLFPCFCLID*AIDACV
Trigger: TACACAAGCATCAATAGCCAAATCGATCAAACAGAA...GCAAGGAAACAAAACTGGACAGAGAATGAGTTTGATGAATTGATGGAAGTAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641320.1
CDS-3UTR CAA 90 bp AATTACTTCCATCAATTCATCAAACTCATTCTCTGTCCAGTTTTGTTTCCTTGCGCTCTTCTTGTTGCATaGATCCTTTTACCATTATGT +
Preference number: 5 (lower is better)
Translates to: NYFHQFIKLILCPVLFPCALLVA*ILLPLC
Trigger: ACATAATGGTAAAAGGATCAATGCAACAAGAAGAGC...GCAAGGAAACAAAACTGGACAGAGAATGAGTTTGATGAATTGATGGAAGTAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641320.1