RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OR5AN1 (Homo sapiens)

Ensembl gene IDs: ENSG00000176495

Ensembl transcript IDs: ENST00000313940.2, ENST00000641850.1, ENST00000641998.1

Found 535 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTTTGTCACCTGGAGAGCTTGGTGGGGGTGGCTGCAGGCCCCAGTTaGGAGGTCCTGCCCAGTGAAGAGGAATGGGATTGGACACCCACC +
Preference number: 1 (lower is better)
Translates to: LCHLESLVGVAAGPS*EVLPSEEEWDWTPT
Trigger: GGTGGGTGTCCAATCCCATTCCTCTTCACTGGGCAGGACCTCCCAACTGGGGCCTGCAGCCACCCCCACCAAGCTCTCCAGGTGACAAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR GCA 90 bp CCTGGGGGCTCCACCCCAGAGAGATGCAGGTCAGCAATCGCTCAGTaGAGCCAGCCCAAGATAGAGGGTATGTGTTGTGGGCCCAAGCCA +
Preference number: 1 (lower is better)
Translates to: PGGSTPERCRSAIAQ*SQPKIEGMCCGPKP
Trigger: TGGCTTGGGCCCACAACACATACCCTCTATCTTGGGCTGGCTGCACTGAGCGATTGCTGACCTGCATCTCTCTGGGGTGGAGCCCCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR TCA 90 bp CTTGGTGGGGGTGGCTGCAGGCCCCAGTTGGGAGGTCCTGCCCAGTaGAGAGGAATGGGATTGGACACCCACCTAAAGCATAGTCTGGCT +
Preference number: 1 (lower is better)
Translates to: LGGGGCRPQLGGPAQ*RGMGLDTHLKHSLA
Trigger: AGCCAGACTATGCTTTAGGTGGGTGTCCAATCCCATTCCTCTTCACTGGGCAGGACCTCCCAACTGGGGCCTGCAGCCACCCCCACCAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR CCA 90 bp GCCATCTCAGGGATAATTCAAATCTTTGTCACCTGGAGAGCTTGGTaGGGGTGGCTGCAGGCCCCAGTTGGGAGGTCCTGCCCAGTGAAG +
Preference number: 1 (lower is better)
Translates to: AISGIIQIFVTWRAW*GWLQAPVGRSCPVK
Trigger: CTTCACTGGGCAGGACCTCCCAACTGGGGCCTGCAGCCACCCCCACCAAGCTCTCCAGGTGACAAAGATTTGAATTATCCCTGAGATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR CCA 90 bp AGTGCCATCTCAGGGATAATTCAAATCTTTGTCACCTGGAGAGCTTaGTGGGGGTGGCTGCAGGCCCCAGTTGGGAGGTCCTGCCCAGTG +
Preference number: 1 (lower is better)
Translates to: SAISGIIQIFVTWRA*WGWLQAPVGRSCPV
Trigger: CACTGGGCAGGACCTCCCAACTGGGGCCTGCAGCCACCCCCACCAAGCTCTCCAGGTGACAAAGATTTGAATTATCCCTGAGATGGCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR CCA 90 bp CCCTCTGTGAGTGCCATCTCAGGGATAATTCAAATCTTTGTCACCTaGAGAGCTTGGTGGGGGTGGCTGCAGGCCCCAGTTGGGAGGTCC +
Preference number: 1 (lower is better)
Translates to: PSVSAISGIIQIFVT*RAWWGWLQAPVGRS
Trigger: GGACCTCCCAACTGGGGCCTGCAGCCACCCCCACCAAGCTCTCCAGGTGACAAAGATTTGAATTATCCCTGAGATGGCACTCACAGAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR CCA 90 bp TCAGGGATAATTCAAATCTTTGTCACCTGGAGAGCTTGGTGGGGGTaGCTGCAGGCCCCAGTTGGGAGGTCCTGCCCAGTGAAGAGGAAT +
Preference number: 1 (lower is better)
Translates to: SGIIQIFVTWRAWWG*LQAPVGRSCPVKRN
Trigger: ATTCCTCTTCACTGGGCAGGACCTCCCAACTGGGGCCTGCAGCCACCCCCACCAAGCTCTCCAGGTGACAAAGATTTGAATTATCCCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR CCA 90 bp AACCTGGAGGTGTCACCAGTGAAGGCTGTGAAACAGCAAAGACAGTaGCTTGTCCCTTCCTCTGAGAGCTTTGTCCCAGGGAGGTATGCA +
Preference number: 1 (lower is better)
Translates to: NLEVSPVKAVKQQRQ*LVPSSESFVPGRYA
Trigger: TGCATACCTCCCTGGGACAAAGCTCTCAGAGGAAGGGACAAGCCACTGTCTTTGCTGTTTCACAGCCTTCACTGGTGACACCTCCAGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR CCA 90 bp GGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTGAGAAGATATaGGAATGGAAACCCACGAAACACTCTGGCCACTTTTCCATAGGG +
Preference number: 1 (lower is better)
Translates to: GGWKPRPEDLPGEKI*EWKPTKHSGHFSIG
Trigger: CCCTATGGAAAAGTGGCCAGAGTGTTTCGTGGGTTTCCATTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR CCA 90 bp GAGATCTTCGTAATGGTTGTGGCTAAGGGTCATTTGTTTGACTCCTaGGGGCTCCACCCCAGAGAGATGCAGGTCAGCAATCGCTCAGTG +
Preference number: 1 (lower is better)
Translates to: EIFVMVVAKGHLFDS*GLHPREMQVSNRSV
Trigger: CACTGAGCGATTGCTGACCTGCATCTCTCTGGGGTGGAGCCCCCAGGAGTCAAACAAATGACCCTTAGCCACAACCATTACGAAGATCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR TCA 90 bp AGTGAAGGCTGTGAAACAGCAAAGACAGTGGCTTGTCCCTTCCTCTaGGAGCTTTGTCCCAGGGAGGTATGCAGTTTTGGTGGCCCAAAG +
Preference number: 1 (lower is better)
Translates to: SEGCETAKTVACPFL*ELCPREVCSFGGPK
Trigger: CTTTGGGCCACCAAAACTGCATACCTCCCTGGGACAAAGCTCTCAGAGGAAGGGACAAGCCACTGTCTTTGCTGTTTCACAGCCTTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR CCA 90 bp TGGAAGCCCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAATaGAAACCCACGAAACACTCTGGCCACTTTTCCATAGGGCTGCTG +
Preference number: 1 (lower is better)
Translates to: WKPRPEDLPGEKIWE*KPTKHSGHFSIGLL
Trigger: CAGCAGCCCTATGGAAAAGTGGCCAGAGTGTTTCGTGGGTTTCCATTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGGGCTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR CCA 90 bp TTCATTAGTTGGAGCGTGTCAAGGGCAGTTCCACTGCAGAGGCAGTaGCATAGAAACTTTCTGTTGACCTCGGAAGCTCTGTCTAGGGAG +
Preference number: 1 (lower is better)
Translates to: FISWSVSRAVPLQRQ*HRNFLLTSEALSRE
Trigger: CTCCCTAGACAGAGCTTCCGAGGTCAACAGAAAGTTTCTATGCCACTGCCTCTGCAGTGGAACTGCCCTTGACACGCTCCAACTAATGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR GCA 90 bp AAGACTCTTGTTCTGTTGTGTGGCTCCCCTATGTTTCCTCACATTTaGAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTTTCCTCT +
Preference number: 1 (lower is better)
Translates to: KTLVLLCGSPMFPHI*SCVPSQCSERVVSS
Trigger: AGAGGAAACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGCAAATGTGAGGAAACATAGGGGAGCCACACAACAGAACAAGAGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR CCA 90 bp ATACCTAGGCTTACAGGACAGCTGGAAGACTCTTGTTCTGTTGTGTaGCTCCCCTATGTTTCCTCACATTTGCAGCTGTGTTCCCTCTCA +
Preference number: 1 (lower is better)
Translates to: IPRLTGQLEDSCSVV*LPYVSSHLQLCSLS
Trigger: TGAGAGGGAACACAGCTGCAAATGTGAGGAAACATAGGGGAGCCACACAACAGAACAAGAGTCTTCCAGCTGTCCTGTAAGCCTAGGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR TCA 90 bp AAGTTTCTCCTTCCCTTTATTTTGAGCCTGTGTGTGTCTTACATGTaGGACGGGTCTCTTGAAGACAGCATACCATTGGGTCTTCCTTTT +
Preference number: 1 (lower is better)
Translates to: KFLLPFILSLCVSYM*DGSLEDSIPLGLPF
Trigger: AAAAGGAAGACCCAATGGTATGCTGTCTTCAAGAGACCCGTCTCACATGTAAGACACACACAGGCTCAAAATAAAGGGAAGGAGAAACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR GCA 90 bp ATCTCTTGTAAGGCAGGTCTGGTGGTAATGAAGTCCCTCAACATTTaGTTATCTGAGAAGGATTGTATTATTCCTTCACTTAGGAGCTTA +
Preference number: 1 (lower is better)
Translates to: ISCKAGLVVMKSLNI*LSEKDCIIPSLRSL
Trigger: TAAGCTCCTAAGTGAAGGAATAATACAATCCTTCTCAGATAAGCAAATGTTGAGGGACTTCATTACCACCAGACCTGCCTTACAAGAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR GCA 90 bp CATTCAAGGTTAATACTGATATGTGTGCATTTGATTCTGTCATTGTaGTGTCAGCTGGTTATTATGTTTACTTGTTTGTGTGGTTGCTTC +
Preference number: 1 (lower is better)
Translates to: HSRLILICVHLILSL*CQLVIMFTCLCGCF
Trigger: GAAGCAACCACACAAACAAGTAAACATAATAACCAGCTGACAGCACAATGACAGAATCAAATGCACACATATCAGTATTAACCTTGAATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR GCA 90 bp GTTCCTCTGAATTCCTCACCTTCACATATTCTGTTTCTTCTAACTTaGCATAACACAATCTTTCTCTCCAAATCAGTGAACATTTTTGCA +
Preference number: 1 (lower is better)
Translates to: VPLNSSPSHILFLLT*HNTIFLSKSVNIFA
Trigger: TGCAAAAATGTTCACTGATTTGGAGAGAAAGATTGTGTTATGGCAAGTTAGAAGAAACAGAATATGTGAAGGTGAGGAATTCAGAGGAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR CCA 90 bp CTCTGTCTGTTTATTCTTTCCCATCCAGAAACACAGAATAAACAATaGTTACCACCATGTCTTTATTATGCTGTATCAGCATATATGGGA +
Preference number: 1 (lower is better)
Translates to: LCLFILSHPETQNKQ*LPPCLYYAVSAYMG
Trigger: TCCCATATATGCTGATACAGCATAATAAAGACATGGTGGTAACCATTGTTTATTCTGTGTTTCTGGATGGGAAAGAATAAACAGACAGAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CCA 90 bp GCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTTTCCTCTCCCCCTGAGTACCTGGAGAGCTTGGTaGGGGTGGCTGCAGGCCCCA +
Preference number: 2 (lower is better)
Translates to: AAVFPLSAQNVWFPLPLSTWRAW*GWLQAP
Trigger: TGGGGCCTGCAGCCACCCCCACCAAGCTCTCCAGGT...ACTCAGGGGGAGAGGAAACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CCA 90 bp GGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAAAGAGCTTGGTGGGGGTaGCTGCAGGCCCCAGTTGGG +
Preference number: 2 (lower is better)
Translates to: GGGWKPRPEDLPGEKIWERAWWG*LQAPVG
Trigger: CCCAACTGGGGCCTGCAGCCACCCCCACCAAGCTCT...TTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CCA 90 bp GGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAAACCTGGAGAGCTTGGTaGGGGTGGCTGCAGGCCCCA +
Preference number: 2 (lower is better)
Translates to: GGGWKPRPEDLPGEKIWETWRAW*GWLQAP
Trigger: TGGGGCCTGCAGCCACCCCCACCAAGCTCTCCAGGT...TTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CCA 90 bp GCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTTTCCTCTCCCCCTGAGTCCATGCTGGCCTGAGTaGCTGCTCTGCCAAGACTCC +
Preference number: 2 (lower is better)
Translates to: AAVFPLSAQNVWFPLPLSPCWPE*LLCQDS
Trigger: GGAGTCTTGGCAGAGCAGCCACTCAGGCCAGCATGG...ACTCAGGGGGAGAGGAAACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CCA 90 bp GCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTTTCCTCTCCCCCTGAGTTCTGGTGATGAGTGGTaGGGGGTGTGTGGGACCCGT +
Preference number: 2 (lower is better)
Translates to: AAVFPLSAQNVWFPLPLSSGDEW*GVCGTR
Trigger: ACGGGTCCCACACACCCCCCACCACTCATCACCAGA...ACTCAGGGGGAGAGGAAACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CCA 90 bp GGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAACCATGCTGGCCTGAGTaGCTGCTCTGCCAAGACTCC +
Preference number: 2 (lower is better)
Translates to: GGGWKPRPEDLPGEKIWEPCWPE*LLCQDS
Trigger: GGAGTCTTGGCAGAGCAGCCACTCAGGCCAGCATGG...TTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR GCA 90 bp GCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTTTCCTCTCCCCCTGAGTTCTGGTCAGCCATCTTaGCCACTCCTCCACTTCTCC +
Preference number: 2 (lower is better)
Translates to: AAVFPLSAQNVWFPLPLSSGQPS*PLLHFS
Trigger: GGAGAAGTGGAGGAGTGGGCAAGATGGCTGACCAGA...ACTCAGGGGGAGAGGAAACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR GCA 90 bp CCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAATGGAAACCCACGAAACCTTGGTGGGGGTGGCTaGAGGCCCCAGTTGGGAGGT +
Preference number: 2 (lower is better)
Translates to: PGLKIFLVRRYGNGNPRNLGGGG*RPQLGG
Trigger: ACCTCCCAACTGGGGCCTGCAGCCACCCCCACCAAG...GTTTCGTGGGTTTCCATTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR TCA 90 bp GTGTCACCAGTGAAGGCTGTGAAACAGCAAAGACAGTGGCTTGTCCCTTCCTCTGACTCCATGCTGGCCTaGGTGGCTGCTCTGCCAAGA +
Preference number: 2 (lower is better)
Translates to: VSPVKAVKQQRQWLVPSSDSMLA*VAALPR
Trigger: TCTTGGCAGAGCAGCCACTCAGGCCAGCATGGAGTC...AGAGGAAGGGACAAGCCACTGTCTTTGCTGTTTCACAGCCTTCACTGGTGACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR GCA 90 bp TATGTTTCCTCACATTTGCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTCTTGGTGGGGGTGGCTaGAGGCCCCAGTTGGGAGGT +
Preference number: 2 (lower is better)
Translates to: YVSSHLQLCSLSVLRTCGLGGGG*RPQLGG
Trigger: ACCTCCCAACTGGGGCCTGCAGCCACCCCCACCAAG...ACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGCAAATGTGAGGAAACATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CCA 90 bp GCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTTTCCTCTCCCCCTGAGTCACACTAGCTGCTTCTaGTCAGCCATCTTGCCCACT +
Preference number: 2 (lower is better)
Translates to: AAVFPLSAQNVWFPLPLSHTSCF*SAILPT
Trigger: AGTGGGCAAGATGGCTGACCAGAAGCAGCTAGTGTG...ACTCAGGGGGAGAGGAAACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CCA 90 bp TTGATAGTTCTGGCTGGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTTGTGTTGTGCTAGGCTaGGGGTTCTCTTCCACCCTG +
Preference number: 2 (lower is better)
Translates to: LIVLAGGGWKPRPEDLPGCVVLG*GFSSTL
Trigger: CAGGGTGGAAGAGAACCCCCAGCCTAGCACAACACA...ACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACCAGCCAGAACTATCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CCA 90 bp TATGTTTCCTCACATTTGCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTAGAGCTTGGTGGGGGTaGCTGCAGGCCCCAGTTGGG +
Preference number: 2 (lower is better)
Translates to: YVSSHLQLCSLSVLRTCGRAWWG*LQAPVG
Trigger: CCCAACTGGGGCCTGCAGCCACCCCCACCAAGCTCT...ACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGCAAATGTGAGGAAACATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR CAA 90 bp CTTGTCCCTTCCTCTGAGAGCTTTGTCCCAGGGAGGTATGCAGTTTaGGTGGCCCAAAGCAGCTGTAGGAAGTGGCTGGAGAGCCTAGTT +
Preference number: 2 (lower is better)
Translates to: LVPSSESFVPGRYAV*VAQSSCRKWLESLV
Trigger: AACTAGGCTCTCCAGCCACTTCCTACAGCTGCTTTGGGCCACCAAAACTGCATACCTCCCTGGGACAAAGCTCTCAGAGGAAGGGACAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR TCA 90 bp GTGTCACCAGTGAAGGCTGTGAAACAGCAAAGACAGTGGCTTGTCCCTTCCTCTGGGGGTGGCAGAGCCTaGATTTTACGCCAGGCAGTT +
Preference number: 2 (lower is better)
Translates to: VSPVKAVKQQRQWLVPSSGGGRA*ILRQAV
Trigger: AACTGCCTGGCGTAAAATTCAGGCTCTGCCACCCCC...AGAGGAAGGGACAAGCCACTGTCTTTGCTGTTTCACAGCCTTCACTGGTGACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR GCA 90 bp TATGTTTCCTCACATTTGCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTCACTCCTGGGCTGCCTaGTGCAGCTCTGGGGAGATC +
Preference number: 2 (lower is better)
Translates to: YVSSHLQLCSLSVLRTCGHSWAA*CSSGEI
Trigger: GATCTCCCCAGAGCTGCAGCAGGCAGCCCAGGAGTG...ACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGCAAATGTGAGGAAACATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CCA 90 bp GGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAAAAAGCCCTGGTGGAGTaGGTTCACAAGGAGATCTCC +
Preference number: 2 (lower is better)
Translates to: GGGWKPRPEDLPGEKIWEKALVE*VHKEIS
Trigger: GGAGATCTCCTTGTGAACCCACTCCACCAGGGCTTT...TTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CCA 90 bp TATGTTTCCTCACATTTGCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTGCTGCAGGCCCCAGTTaGGAGGTCCTGCCCAGTGAA +
Preference number: 2 (lower is better)
Translates to: YVSSHLQLCSLSVLRTCGAAGPS*EVLPSE
Trigger: TTCACTGGGCAGGACCTCCCAACTGGGGCCTGCAGC...ACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGCAAATGTGAGGAAACATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR CAA 90 bp ACAGCAGTGGAAGAGATCTTCGTAATGGTTGTGGCTAAGGGTCATTaGTTTGACTCCTGGGGGCTCCACCCCAGAGAGATGCAGGTCAGC +
Preference number: 2 (lower is better)
Translates to: TAVEEIFVMVVAKGH*FDSWGLHPREMQVS
Trigger: GCTGACCTGCATCTCTCTGGGGTGGAGCCCCCAGGAGTCAAACAAATGACCCTTAGCCACAACCATTACGAAGATCTCTTCCACTGCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR TCA 90 bp CCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAATGGAAACCCACGAAACGGGGGTGGCAGAGCCTaGATTTTACGCCAGGCAGTT +
Preference number: 2 (lower is better)
Translates to: PGLKIFLVRRYGNGNPRNGGGRA*ILRQAV
Trigger: AACTGCCTGGCGTAAAATTCAGGCTCTGCCACCCCC...GTTTCGTGGGTTTCCATTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR TCA 90 bp GGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAATCTGAACAGCAAAGATaGCAGCCCAGCTCTTCCCTT +
Preference number: 2 (lower is better)
Translates to: GGGWKPRPEDLPGEKIWESEQQR*QPSSSL
Trigger: AAGGGAAGAGCTGGGCTGTCATCTTTGCTGTTCAGA...TTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CCA 90 bp TTGATAGTTCTGGCTGGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTTATCCTCAGATCATCTaGAGATCAGCTGGGACTGGC +
Preference number: 2 (lower is better)
Translates to: LIVLAGGGWKPRPEDLPGYPQII*RSAGTG
Trigger: GCCAGTCCCAGCTGATCTCCAGATGATCTGAGGATA...ACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACCAGCCAGAACTATCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CCA 90 bp GGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAATCTTATCTTGTGAGGTaGCATGGAAGTGGGGCCTGT +
Preference number: 2 (lower is better)
Translates to: GGGWKPRPEDLPGEKIWESYLVR*HGSGAC
Trigger: ACAGGCCCCACTTCCATGCCACCTCACAAGATAAGA...TTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CCA 90 bp TTGATAGTTCTGGCTGGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTGGTTCTCTTCCACCCTaGGTCAGCTCAGATTCTTCA +
Preference number: 2 (lower is better)
Translates to: LIVLAGGGWKPRPEDLPGGSLPP*VSSDSS
Trigger: TGAAGAATCTGAGCTGACCCAGGGTGGAAGAGAACC...ACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACCAGCCAGAACTATCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR TCA 90 bp GTGTCACCAGTGAAGGCTGTGAAACAGCAAAGACAGTGGCTTGTCCCTTCCTCTGGGTTAGGGAGATTCTaGTGGGCCATATCTGGCAGA +
Preference number: 2 (lower is better)
Translates to: VSPVKAVKQQRQWLVPSSGLGRF*WAISGR
Trigger: TCTGCCAGATATGGCCCATCAGAATCTCCCTAACCC...AGAGGAAGGGACAAGCCACTGTCTTTGCTGTTTCACAGCCTTCACTGGTGACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR TCA 90 bp TATGTTTCCTCACATTTGCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTGGAGGTCCTGCCCAGTaGAGAGGAATGGGATTGGAC +
Preference number: 2 (lower is better)
Translates to: YVSSHLQLCSLSVLRTCGGGPAQ*RGMGLD
Trigger: GTCCAATCCCATTCCTCTTCACTGGGCAGGACCTCC...ACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGCAAATGTGAGGAAACATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR GCA 90 bp GGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAAAAAGATTGTGTGGCTTaGCCAGCATCACACACCTTG +
Preference number: 2 (lower is better)
Translates to: GGGWKPRPEDLPGEKIWEKDCVA*PASHTL
Trigger: CAAGGTGTGTGATGCTGGGCAAGCCACACAATCTTT...TTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR GCA 90 bp GTGTCACCAGTGAAGGCTGTGAAACAGCAAAGACAGTGGCTTGTCCCTTCCTCTGCCACACACACTAGCTaGTTCTGGTCAGCCATCTTG +
Preference number: 2 (lower is better)
Translates to: VSPVKAVKQQRQWLVPSSATHTS*FWSAIL
Trigger: CAAGATGGCTGACCAGAAGCAGCTAGTGTGTGTGGC...AGAGGAAGGGACAAGCCACTGTCTTTGCTGTTTCACAGCCTTCACTGGTGACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CCA 90 bp GCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTTTCCTCTCCCCCTGAGTTTTTTCCCTTTCCAATaGCAGAACCCCTCTGTCTGT +
Preference number: 2 (lower is better)
Translates to: AAVFPLSAQNVWFPLPLSFFPFQ*QNPSVC
Trigger: ACAGACAGAGGGGTTCTGCCATTGGAAAGGGAAAAA...ACTCAGGGGGAGAGGAAACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CCA 90 bp CCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAATGGAAACCCACGAAACCAGCATCACACACCTTaGGGGTGGCAGAGCCTGAAT +
Preference number: 2 (lower is better)
Translates to: PGLKIFLVRRYGNGNPRNQHHTP*GWQSLN
Trigger: ATTCAGGCTCTGCCACCCCCAAGGTGTGTGATGCTG...GTTTCGTGGGTTTCCATTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CCA 90 bp GTGTCACCAGTGAAGGCTGTGAAACAGCAAAGACAGTGGCTTGTCCCTTCCTCTTGGAAGTGGGGCCTGTaGGTTGTTGCTGTTAACACC +
Preference number: 2 (lower is better)
Translates to: VSPVKAVKQQRQWLVPSSWKWGL*VVAVNT
Trigger: GGTGTTAACAGCAACAACCCACAGGCCCCACTTCCA...AGAGGAAGGGACAAGCCACTGTCTTTGCTGTTTCACAGCCTTCACTGGTGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CCA 90 bp GTGTCACCAGTGAAGGCTGTGAAACAGCAAAGACAGTGGCTTGTCCCTTCCTCTACAGCTGTGCTGTGTTaGGGGTCTACTTCAGTCCTC +
Preference number: 2 (lower is better)
Translates to: VSPVKAVKQQRQWLVPSSTAVLC*GSTSVL
Trigger: GAGGACTGAAGTAGACCCCCAACACAGCACAGCTGT...AGAGGAAGGGACAAGCCACTGTCTTTGCTGTTTCACAGCCTTCACTGGTGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CCA 90 bp GGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAAAAACAGCAAAGACAGTaGCTTGTCCCTTCCTCTGAG +
Preference number: 2 (lower is better)
Translates to: GGGWKPRPEDLPGEKIWEKQQRQ*LVPSSE
Trigger: CTCAGAGGAAGGGACAAGCCACTGTCTTTGCTGTTT...TTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CCA 90 bp TATGTTTCCTCACATTTGCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTCTGATTCAGCACTCCTaGGCTGCCTGCTGCAGCTCT +
Preference number: 2 (lower is better)
Translates to: YVSSHLQLCSLSVLRTCGLIQHS*AACCSS
Trigger: AGAGCTGCAGCAGGCAGCCCAGGAGTGCTGAATCAG...ACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGCAAATGTGAGGAAACATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR CAA 90 bp AGTGGATCTTATCTTGTGAGGTGGCATGGAAGTGGGGCCTGTGGGTaGTTGCTGTTAACACCCCTGGATTCAGCCTCTTTCCTAGGGTTA +
Preference number: 2 (lower is better)
Translates to: SGSYLVRWHGSGACG*LLLTPLDSASFLGL
Trigger: TAACCCTAGGAAAGAGGCTGAATCCAGGGGTGTTAACAGCAACAACCCACAGGCCCCACTTCCATGCCACCTCACAAGATAAGATCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR TCA 90 bp TTTTCCAAATTTGTCCCTGGACCTTCCCTCAAGATGGGCTTAGCTAGACTACATGACTCCATGCTGGCCTaGGTGGCTGCTCTGCCAAGA +
Preference number: 2 (lower is better)
Translates to: FSKFVPGPSLKMGLARLHDSMLA*VAALPR
Trigger: TCTTGGCAGAGCAGCCACTCAGGCCAGCATGGAGTC...ATGTAGTCTAGCTAAGCCCATCTTGAGGGAAGGTCCAGGGACAAATTTGGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR GCA 90 bp CCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAATGGAAACCCACGAAACGCCACACACACTAGCTaGTTCTGGTCAGCCATCTTG +
Preference number: 2 (lower is better)
Translates to: PGLKIFLVRRYGNGNPRNATHTS*FWSAIL
Trigger: CAAGATGGCTGACCAGAAGCAGCTAGTGTGTGTGGC...GTTTCGTGGGTTTCCATTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR GCA 90 bp TTGATAGTTCTGGCTGGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTTTCTCCCTCTGTGAGTaGCATCTCAGGGATAATTCA +
Preference number: 2 (lower is better)
Translates to: LIVLAGGGWKPRPEDLPGFSLCE*HLRDNS
Trigger: TGAATTATCCCTGAGATGGCACTCACAGAGGGAGAA...ACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACCAGCCAGAACTATCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CCA 90 bp TTGATAGTTCTGGCTGGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTCTGATGGGCCATATCTaGCAGAAATCTCAGAATCTG +
Preference number: 2 (lower is better)
Translates to: LIVLAGGGWKPRPEDLPGLMGHI*QKSQNL
Trigger: CAGATTCTGAGATTTCTGCCAGATATGGCCCATCAG...ACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACCAGCCAGAACTATCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CCA 90 bp TATGTTTCCTCACATTTGCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTATGTTTCTGAACTCCTaGGGGTCTGTGCCAGGCCTC +
Preference number: 2 (lower is better)
Translates to: YVSSHLQLCSLSVLRTCGMFLNS*GSVPGL
Trigger: GAGGCCTGGCACAGACCCCCAGGAGTTCAGAAACAT...ACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGCAAATGTGAGGAAACATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CCA 90 bp TTGATAGTTCTGGCTGGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTGGAATTCCAAGCCAGTaGATCTTATCTTGTGAGGTG +
Preference number: 2 (lower is better)
Translates to: LIVLAGGGWKPRPEDLPGGIPSQ*ILSCEV
Trigger: CACCTCACAAGATAAGATCCACTGGCTTGGAATTCC...ACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACCAGCCAGAACTATCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CCA 90 bp TATGTTTCCTCACATTTGCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTTGTGTTGTGCTAGGCTaGGGGTTCTCTTCCACCCTG +
Preference number: 2 (lower is better)
Translates to: YVSSHLQLCSLSVLRTCGCVVLG*GFSSTL
Trigger: CAGGGTGGAAGAGAACCCCCAGCCTAGCACAACACA...ACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGCAAATGTGAGGAAACATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CCA 90 bp TTTTCCAAATTTGTCCCTGGACCTTCCCTCAAGATGGGCTTAGCTAGACTACATCTGGCTGGTGGTGGCTaGAAGCCCAGGCCTGAAGAT +
Preference number: 2 (lower is better)
Translates to: FSKFVPGPSLKMGLARLHLAGGG*KPRPED
Trigger: ATCTTCAGGCCTGGGCTTCCAGCCACCACCAGCCAG...ATGTAGTCTAGCTAAGCCCATCTTGAGGGAAGGTCCAGGGACAAATTTGGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CCA 90 bp TTTTCCAAATTTGTCCCTGGACCTTCCCTCAAGATGGGCTTAGCTAGACTACATTCTGGTGATGAGTGGTaGGGGGTGTGTGGGACCCGT +
Preference number: 2 (lower is better)
Translates to: FSKFVPGPSLKMGLARLHSGDEW*GVCGTR
Trigger: ACGGGTCCCACACACCCCCCACCACTCATCACCAGA...ATGTAGTCTAGCTAAGCCCATCTTGAGGGAAGGTCCAGGGACAAATTTGGAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CCA 90 bp TATGTTTCCTCACATTTGCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTCATTTGTTTGACTCCTaGGGGCTCCACCCCAGAGAG +
Preference number: 2 (lower is better)
Translates to: YVSSHLQLCSLSVLRTCGHLFDS*GLHPRE
Trigger: CTCTCTGGGGTGGAGCCCCCAGGAGTCAAACAAATG...ACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGCAAATGTGAGGAAACATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR CAA 90 bp GAAGACTCTTGTTCTGTTGTGTGGCTCCCCTATGTTTCCTCACATTaGCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTTTCCTC +
Preference number: 2 (lower is better)
Translates to: EDSCSVVWLPYVSSH*QLCSLSVLRTCGFL
Trigger: GAGGAAACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGCAAATGTGAGGAAACATAGGGGAGCCACACAACAGAACAAGAGTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR TCA 90 bp TATGTTTCCTCACATTTGCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTGGGTTAGGGAGATTCTaGTGGGCCATATCTGGCAGA +
Preference number: 2 (lower is better)
Translates to: YVSSHLQLCSLSVLRTCGGLGRF*WAISGR
Trigger: TCTGCCAGATATGGCCCATCAGAATCTCCCTAACCC...ACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGCAAATGTGAGGAAACATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR GCA 90 bp GTGTCACCAGTGAAGGCTGTGAAACAGCAAAGACAGTGGCTTGTCCCTTCCTCTAAAGATTGTGTGGCTTaGCCAGCATCACACACCTTG +
Preference number: 2 (lower is better)
Translates to: VSPVKAVKQQRQWLVPSSKDCVA*PASHTL
Trigger: CAAGGTGTGTGATGCTGGGCAAGCCACACAATCTTT...AGAGGAAGGGACAAGCCACTGTCTTTGCTGTTTCACAGCCTTCACTGGTGACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR GCA 90 bp GCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTTTCCTCTCCCCCTGAGTATAGCGTTTATTATATaGTGGGGTCCCTATTCTGAG +
Preference number: 2 (lower is better)
Translates to: AAVFPLSAQNVWFPLPLSIAFII*WGPYSE
Trigger: CTCAGAATAGGGACCCCAGCATATAATAAACGCTAT...ACTCAGGGGGAGAGGAAACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR GCA 90 bp TTTTCCAAATTTGTCCCTGGACCTTCCCTCAAGATGGGCTTAGCTAGACTACATTCCTGGGCTGCCTGCTaGAGCTCTGGGGAGATCTTT +
Preference number: 2 (lower is better)
Translates to: FSKFVPGPSLKMGLARLHSWAAC*SSGEIF
Trigger: AAAGATCTCCCCAGAGCTGCAGCAGGCAGCCCAGGA...ATGTAGTCTAGCTAAGCCCATCTTGAGGGAAGGTCCAGGGACAAATTTGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CCA 90 bp TTCTCCCTCTGTGAGTGCCATCTCAGGGATAATTCAAATCTTTGTCACCTGGAGCAGCATCACACACCTTaGGGGTGGCAGAGCCTGAAT +
Preference number: 2 (lower is better)
Translates to: FSLCECHLRDNSNLCHLEQHHTP*GWQSLN
Trigger: ATTCAGGCTCTGCCACCCCCAAGGTGTGTGATGCTG...CTCCAGGTGACAAAGATTTGAATTATCCCTGAGATGGCACTCACAGAGGGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CCA 90 bp TATGTTTCCTCACATTTGCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTAGCAGCTGTAGGAAGTaGCTGGAGAGCCTAGTTGAG +
Preference number: 2 (lower is better)
Translates to: YVSSHLQLCSLSVLRTCGSSCRK*LESLVE
Trigger: CTCAACTAGGCTCTCCAGCCACTTCCTACAGCTGCT...ACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGCAAATGTGAGGAAACATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR TCA 90 bp CCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAATGGAAACCCACGAAACTCAGCTGGGACTGGCTaGTGTAGAGTAGGCTTAAAT +
Preference number: 2 (lower is better)
Translates to: PGLKIFLVRRYGNGNPRNSAGTG*CRVGLN
Trigger: ATTTAAGCCTACTCTACATCAGCCAGTCCCAGCTGA...GTTTCGTGGGTTTCCATTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR TCA 90 bp CCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAATGGAAACCCACGAAACTTCTGTTCCTTTCCATaGCAGCCACACACACTAGCT +
Preference number: 2 (lower is better)
Translates to: PGLKIFLVRRYGNGNPRNFCSFP*QPHTLA
Trigger: AGCTAGTGTGTGTGGCTGTCATGGAAAGGAACAGAA...GTTTCGTGGGTTTCCATTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR TCA 90 bp TTTTCCAAATTTGTCCCTGGACCTTCCCTCAAGATGGGCTTAGCTAGACTACATGGTCTGCTGTTAGCCTaGCGGGGATCCCTTTGTAGA +
Preference number: 2 (lower is better)
Translates to: FSKFVPGPSLKMGLARLHGLLLA*RGSLCR
Trigger: TCTACAAAGGGATCCCCGTCAGGCTAACAGCAGACC...ATGTAGTCTAGCTAAGCCCATCTTGAGGGAAGGTCCAGGGACAAATTTGGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR GCA 90 bp GCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTTTCCTCTCCCCCTGAGTGCAGCTATCTCATGTTaGTCTTTCTTAAAGACACAA +
Preference number: 2 (lower is better)
Translates to: AAVFPLSAQNVWFPLPLSAAISC*SFLKTQ
Trigger: TTGTGTCTTTAAGAAAGAGCAACATGAGATAGCTGC...ACTCAGGGGGAGAGGAAACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR GCA 90 bp TTGATAGTTCTGGCTGGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTGGAGGCTTTGATATCTaGAATGTTAGTTTGGATTCC +
Preference number: 2 (lower is better)
Translates to: LIVLAGGGWKPRPEDLPGGGFDI*NVSLDS
Trigger: GGAATCCAAACTAACATTGCAGATATCAAAGCCTCC...ACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACCAGCCAGAACTATCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CCA 90 bp TTCTCCCTCTGTGAGTGCCATCTCAGGGATAATTCAAATCTTTGTCACCTGGAGTGGAAGTGGGGCCTGTaGGTTGTTGCTGTTAACACC +
Preference number: 2 (lower is better)
Translates to: FSLCECHLRDNSNLCHLEWKWGL*VVAVNT
Trigger: GGTGTTAACAGCAACAACCCACAGGCCCCACTTCCA...CTCCAGGTGACAAAGATTTGAATTATCCCTGAGATGGCACTCACAGAGGGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CCA 90 bp TATGTTTCCTCACATTTGCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTGGAGGTATGCAGTTTTaGTGGCCCAAAGCAGCTGTA +
Preference number: 2 (lower is better)
Translates to: YVSSHLQLCSLSVLRTCGGGMQF*WPKAAV
Trigger: TACAGCTGCTTTGGGCCACCAAAACTGCATACCTCC...ACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGCAAATGTGAGGAAACATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR TCA 90 bp TTTTCCAAATTTGTCCCTGGACCTTCCCTCAAGATGGGCTTAGCTAGACTACATGTGAGACGGGTCTCTTaGAGACAGCATACCATTGGG +
Preference number: 2 (lower is better)
Translates to: FSKFVPGPSLKMGLARLHVRRVS*RQHTIG
Trigger: CCCAATGGTATGCTGTCTTCAAGAGACCCGTCTCAC...ATGTAGTCTAGCTAAGCCCATCTTGAGGGAAGGTCCAGGGACAAATTTGGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR GCA 90 bp TTGATAGTTCTGGCTGGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTGCAGCTATCTCATGTTaGTCTTTCTTAAAGACACAA +
Preference number: 2 (lower is better)
Translates to: LIVLAGGGWKPRPEDLPGAAISC*SFLKTQ
Trigger: TTGTGTCTTTAAGAAAGAGCAACATGAGATAGCTGC...ACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACCAGCCAGAACTATCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR GCA 90 bp TTTTCCAAATTTGTCCCTGGACCTTCCCTCAAGATGGGCTTAGCTAGACTACATAGGGCTGCTGTTTTATaGTTGGGGGCTGCTCCAGTA +
Preference number: 2 (lower is better)
Translates to: FSKFVPGPSLKMGLARLHRAAVL*LGAAPV
Trigger: TACTGGAGCAGCCCCCAAGCATAAAACAGCAGCCCT...ATGTAGTCTAGCTAAGCCCATCTTGAGGGAAGGTCCAGGGACAAATTTGGAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CCA 90 bp CCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAATGGAAACCCACGAAACTTTTTCCCTTTCCAATaGCAGAACCCCTCTGTCTGT +
Preference number: 2 (lower is better)
Translates to: PGLKIFLVRRYGNGNPRNFFPFQ*QNPSVC
Trigger: ACAGACAGAGGGGTTCTGCCATTGGAAAGGGAAAAA...GTTTCGTGGGTTTCCATTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CCA 90 bp GTGTCACCAGTGAAGGCTGTGAAACAGCAAAGACAGTGGCTTGTCCCTTCCTCTTTCTTATGCTACAGCTaGTGTAGGCAAGGAAATTGC +
Preference number: 2 (lower is better)
Translates to: VSPVKAVKQQRQWLVPSSFLCYS*CRQGNC
Trigger: GCAATTTCCTTGCCTACACCAGCTGTAGCATAAGAA...AGAGGAAGGGACAAGCCACTGTCTTTGCTGTTTCACAGCCTTCACTGGTGACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CCA 90 bp TTCTCCCTCTGTGAGTGCCATCTCAGGGATAATTCAAATCTTTGTCACCTGGAGTATCCTCAGATCATCTaGAGATCAGCTGGGACTGGC +
Preference number: 2 (lower is better)
Translates to: FSLCECHLRDNSNLCHLEYPQII*RSAGTG
Trigger: GCCAGTCCCAGCTGATCTCCAGATGATCTGAGGATA...CTCCAGGTGACAAAGATTTGAATTATCCCTGAGATGGCACTCACAGAGGGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CCA 90 bp TTCTCCCTCTGTGAGTGCCATCTCAGGGATAATTCAAATCTTTGTCACCTGGAGGGTTCTCTTCCACCCTaGGTCAGCTCAGATTCTTCA +
Preference number: 2 (lower is better)
Translates to: FSLCECHLRDNSNLCHLEGSLPP*VSSDSS
Trigger: TGAAGAATCTGAGCTGACCCAGGGTGGAAGAGAACC...CTCCAGGTGACAAAGATTTGAATTATCCCTGAGATGGCACTCACAGAGGGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CCA 90 bp TTTTCCAAATTTGTCCCTGGACCTTCCCTCAAGATGGGCTTAGCTAGACTACATCAAATCTTTGTCACCTaGAGAGCTTGGTGGGGGTGG +
Preference number: 2 (lower is better)
Translates to: FSKFVPGPSLKMGLARLHQIFVT*RAWWGW
Trigger: CCACCCCCACCAAGCTCTCCAGGTGACAAAGATTTG...ATGTAGTCTAGCTAAGCCCATCTTGAGGGAAGGTCCAGGGACAAATTTGGAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CCA 90 bp TTTTCCAAATTTGTCCCTGGACCTTCCCTCAAGATGGGCTTAGCTAGACTACATAGCAGCTGTAGGAAGTaGCTGGAGAGCCTAGTTGAG +
Preference number: 2 (lower is better)
Translates to: FSKFVPGPSLKMGLARLHSSCRK*LESLVE
Trigger: CTCAACTAGGCTCTCCAGCCACTTCCTACAGCTGCT...ATGTAGTCTAGCTAAGCCCATCTTGAGGGAAGGTCCAGGGACAAATTTGGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR TCA 90 bp GTGTCACCAGTGAAGGCTGTGAAACAGCAAAGACAGTGGCTTGTCCCTTCCTCTTGTTGCTATTGGCTGTaGACTTTGAATATCATCTCC +
Preference number: 2 (lower is better)
Translates to: VSPVKAVKQQRQWLVPSSCCYWL*TLNIIS
Trigger: GGAGATGATATTCAAAGTTCACAGCCAATAGCAACA...AGAGGAAGGGACAAGCCACTGTCTTTGCTGTTTCACAGCCTTCACTGGTGACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR TCA 90 bp TTCTCCCTCTGTGAGTGCCATCTCAGGGATAATTCAAATCTTTGTCACCTGGAGCTCTGTGTATTAGACTaGAGACTGAAAGCCCTGGTG +
Preference number: 2 (lower is better)
Translates to: FSLCECHLRDNSNLCHLELCVLD*RLKALV
Trigger: CACCAGGGCTTTCAGTCTTCAGTCTAATACACAGAG...CTCCAGGTGACAAAGATTTGAATTATCCCTGAGATGGCACTCACAGAGGGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR GCA 90 bp TTGATAGTTCTGGCTGGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTACCATGTCTTTATTATaGTGTATCAGCATATATGGG +
Preference number: 2 (lower is better)
Translates to: LIVLAGGGWKPRPEDLPGTMSLL*CISIYG
Trigger: CCCATATATGCTGATACAGCATAATAAAGACATGGT...ACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACCAGCCAGAACTATCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR GCA 90 bp TATGTTTCCTCACATTTGCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTTTCTCCCTCTGTGAGTaGCATCTCAGGGATAATTCA +
Preference number: 2 (lower is better)
Translates to: YVSSHLQLCSLSVLRTCGFSLCE*HLRDNS
Trigger: TGAATTATCCCTGAGATGGCACTCACAGAGGGAGAA...ACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGCAAATGTGAGGAAACATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CCA 90 bp CCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAATGGAAACCCACGAAACTTCTTATGCTACAGCTaGTGTAGGCAAGGAAATTGC +
Preference number: 2 (lower is better)
Translates to: PGLKIFLVRRYGNGNPRNFLCYS*CRQGNC
Trigger: GCAATTTCCTTGCCTACACCAGCTGTAGCATAAGAA...GTTTCGTGGGTTTCCATTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CCA 90 bp TTTTCCAAATTTGTCCCTGGACCTTCCCTCAAGATGGGCTTAGCTAGACTACATGGAGGTATGCAGTTTTaGTGGCCCAAAGCAGCTGTA +
Preference number: 2 (lower is better)
Translates to: FSKFVPGPSLKMGLARLHGGMQF*WPKAAV
Trigger: TACAGCTGCTTTGGGCCACCAAAACTGCATACCTCC...ATGTAGTCTAGCTAAGCCCATCTTGAGGGAAGGTCCAGGGACAAATTTGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CCA 90 bp TTTTCCAAATTTGTCCCTGGACCTTCCCTCAAGATGGGCTTAGCTAGACTACATTGCCTGCTGCAGCTCTaGGGAGATCTTTGTGTTTAC +
Preference number: 2 (lower is better)
Translates to: FSKFVPGPSLKMGLARLHCLLQL*GDLCVY
Trigger: GTAAACACAAAGATCTCCCCAGAGCTGCAGCAGGCA...ATGTAGTCTAGCTAAGCCCATCTTGAGGGAAGGTCCAGGGACAAATTTGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR TCA 90 bp TTCTCCCTCTGTGAGTGCCATCTCAGGGATAATTCAAATCTTTGTCACCTGGAGGAGCCATCTTTGATCTaGGAAGCCACAGGAAACAAA +
Preference number: 2 (lower is better)
Translates to: FSLCECHLRDNSNLCHLEEPSLI*EATGNK
Trigger: TTTGTTTCCTGTGGCTTCTCAGATCAAAGATGGCTC...CTCCAGGTGACAAAGATTTGAATTATCCCTGAGATGGCACTCACAGAGGGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR TCA 90 bp CCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAATGGAAACCCACGAAACTGTTGCTATTGGCTGTaGACTTTGAATATCATCTCC +
Preference number: 2 (lower is better)
Translates to: PGLKIFLVRRYGNGNPRNCCYWL*TLNIIS
Trigger: GGAGATGATATTCAAAGTTCACAGCCAATAGCAACA...GTTTCGTGGGTTTCCATTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR TCA 90 bp TTTTCCAAATTTGTCCCTGGACCTTCCCTCAAGATGGGCTTAGCTAGACTACATTCAGCTGGGACTGGCTaGTGTAGAGTAGGCTTAAAT +
Preference number: 2 (lower is better)
Translates to: FSKFVPGPSLKMGLARLHSAGTG*CRVGLN
Trigger: ATTTAAGCCTACTCTACATCAGCCAGTCCCAGCTGA...ATGTAGTCTAGCTAAGCCCATCTTGAGGGAAGGTCCAGGGACAAATTTGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR TCA 90 bp TTTTCCAAATTTGTCCCTGGACCTTCCCTCAAGATGGGCTTAGCTAGACTACATGGAGATCTCCTGACTTaGGGGTTGCAAAGACCTAAT +
Preference number: 2 (lower is better)
Translates to: FSKFVPGPSLKMGLARLHGDLLT*GLQRPN
Trigger: ATTAGGTCTTTGCAACCCTCAAGTCAGGAGATCTCC...ATGTAGTCTAGCTAAGCCCATCTTGAGGGAAGGTCCAGGGACAAATTTGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR GCA 90 bp TATGTTTCCTCACATTTGCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTTTCTCTGAACATGACTaGAGGTTAGCTTGTCTAGGT +
Preference number: 2 (lower is better)
Translates to: YVSSHLQLCSLSVLRTCGFSEHD*RLACLG
Trigger: ACCTAGACAAGCTAACCTGCAGTCATGTTCAGAGAA...ACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGCAAATGTGAGGAAACATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR GCA 90 bp TTTTCCAAATTTGTCCCTGGACCTTCCCTCAAGATGGGCTTAGCTAGACTACATTCTAACCTCCAACTTTaGTGGGGCTGCAGCTACTTT +
Preference number: 2 (lower is better)
Translates to: FSKFVPGPSLKMGLARLHSNLQL*WGCSYF
Trigger: AAAGTAGCTGCAGCCCCAGCAAAGTTGGAGGTTAGA...ATGTAGTCTAGCTAAGCCCATCTTGAGGGAAGGTCCAGGGACAAATTTGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CCA 90 bp TTTTCCAAATTTGTCCCTGGACCTTCCCTCAAGATGGGCTTAGCTAGACTACATAACCTCCAACTTTGCTaGGGCTGCAGCTACTTTTAC +
Preference number: 2 (lower is better)
Translates to: FSKFVPGPSLKMGLARLHNLQLC*GCSYFY
Trigger: GTAAAAGTAGCTGCAGCCCCAGCAAAGTTGGAGGTT...ATGTAGTCTAGCTAAGCCCATCTTGAGGGAAGGTCCAGGGACAAATTTGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CCA 90 bp TTTTCCAAATTTGTCCCTGGACCTTCCCTCAAGATGGGCTTAGCTAGACTACATTCCAGTTGTTTTCTGTaGGTGATGAGGGCTGAGATC +
Preference number: 2 (lower is better)
Translates to: FSKFVPGPSLKMGLARLHSSCFL*VMRAEI
Trigger: GATCTCAGCCCTCATCACCCACAGAAAACAACTGGA...ATGTAGTCTAGCTAAGCCCATCTTGAGGGAAGGTCCAGGGACAAATTTGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR TCA 90 bp CCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAATGGAAACCCACGAAACTTCTATCCCACTTCATaGTTAAAATCACCTCCTTCT +
Preference number: 2 (lower is better)
Translates to: PGLKIFLVRRYGNGNPRNFYPTS*LKSPPS
Trigger: AGAAGGAGGTGATTTTAATCATGAAGTGGGATAGAA...GTTTCGTGGGTTTCCATTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR TCA 90 bp CCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAATGGAAACCCACGAAACTGCAAAATCCAGTGCTaGCTGCAACATTCATTTATT +
Preference number: 2 (lower is better)
Translates to: PGLKIFLVRRYGNGNPRNCKIQC*LQHSFI
Trigger: AATAAATGAATGTTGCAGTCAGCACTGGATTTTGCA...GTTTCGTGGGTTTCCATTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR GCA 90 bp TATGTTTCCTCACATTTGCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTATAGCGTTTATTATATaGTGGGGTCCCTATTCTGAG +
Preference number: 2 (lower is better)
Translates to: YVSSHLQLCSLSVLRTCGIAFII*WGPYSE
Trigger: CTCAGAATAGGGACCCCAGCATATAATAAACGCTAT...ACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGCAAATGTGAGGAAACATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR GCA 90 bp TATGTTTCCTCACATTTGCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTGGAGGCTTTGATATCTaGAATGTTAGTTTGGATTCC +
Preference number: 2 (lower is better)
Translates to: YVSSHLQLCSLSVLRTCGGGFDI*NVSLDS
Trigger: GGAATCCAAACTAACATTGCAGATATCAAAGCCTCC...ACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGCAAATGTGAGGAAACATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CCA 90 bp CCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAATGGAAACCCACGAAACCTGTATCAGCATATATaGGAGATGATGTTTCTGAAC +
Preference number: 2 (lower is better)
Translates to: PGLKIFLVRRYGNGNPRNLYQHI*EMMFLN
Trigger: GTTCAGAAACATCATCTCCCATATATGCTGATACAG...GTTTCGTGGGTTTCCATTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CCA 90 bp TTTTCCAAATTTGTCCCTGGACCTTCCCTCAAGATGGGCTTAGCTAGACTACATTCTTGTTCTGTTGTGTaGCTCCCCTATGTTTCCTCA +
Preference number: 2 (lower is better)
Translates to: FSKFVPGPSLKMGLARLHSCSVV*LPYVSS
Trigger: TGAGGAAACATAGGGGAGCCACACAACAGAACAAGA...ATGTAGTCTAGCTAAGCCCATCTTGAGGGAAGGTCCAGGGACAAATTTGGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR TCA 90 bp TTTTCCAAATTTGTCCCTGGACCTTCCCTCAAGATGGGCTTAGCTAGACTACATTCCTTCCCTTTATTTTaGGCCTGTGTGTGTCTTACA +
Preference number: 2 (lower is better)
Translates to: FSKFVPGPSLKMGLARLHSFPLF*ACVCLT
Trigger: TGTAAGACACACACAGGCTCAAAATAAAGGGAAGGA...ATGTAGTCTAGCTAAGCCCATCTTGAGGGAAGGTCCAGGGACAAATTTGGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CCA 90 bp TATGTTTCCTCACATTTGCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTTTACGCCAGGCAGTTTaGACAAGGAGAAAATTTTTA +
Preference number: 2 (lower is better)
Translates to: YVSSHLQLCSLSVLRTCGLRQAV*TRRKFL
Trigger: TAAAAATTTTCTCCTTGTCCAAACTGCCTGGCGTAA...ACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGCAAATGTGAGGAAACATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CCA 90 bp TTTTCCAAATTTGTCCCTGGACCTTCCCTCAAGATGGGCTTAGCTAGACTACATGAGAAGATATGGGAATaGAAACCCACGAAACACTCT +
Preference number: 2 (lower is better)
Translates to: FSKFVPGPSLKMGLARLHEKIWE*KPTKHS
Trigger: AGAGTGTTTCGTGGGTTTCCATTCCCATATCTTCTC...ATGTAGTCTAGCTAAGCCCATCTTGAGGGAAGGTCCAGGGACAAATTTGGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR CAA 90 bp CTCCAGGACCTAAAGATCCTGATGTCTGTGGCATTGAGTCATCTGTaGGTCCATATTGGCATATTTTGTGCATCAAATCAAGCCTTCTTT +
Preference number: 2 (lower is better)
Translates to: LQDLKILMSVALSHL*VHIGIFCASNQAFF
Trigger: AAAGAAGGCTTGATTTGATGCACAAAATATGCCAATATGGACCAACAGATGACTCAATGCCACAGACATCAGGATCTTTAGGTCCTGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR TCA 90 bp TTTATTATGCTGTATCAGCATATATGGGAGATGATGTTTCTGAACTCCTGGGGGGAGCCATCTTTGATCTaGGAAGCCACAGGAAACAAA +
Preference number: 2 (lower is better)
Translates to: FIMLYQHIWEMMFLNSWGEPSLI*EATGNK
Trigger: TTTGTTTCCTGTGGCTTCTCAGATCAAAGATGGCTC...CCCCCAGGAGTTCAGAAACATCATCTCCCATATATGCTGATACAGCATAATAAA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CCA 90 bp AAAATAATGAACCTCCAGGACCTAAAGATCCTGATGTCTGTGGCATTGAGTCATCTGATGGGCCATATCTaGCAGAAATCTCAGAATCTG +
Preference number: 2 (lower is better)
Translates to: KIMNLQDLKILMSVALSHLMGHI*QKSQNL
Trigger: CAGATTCTGAGATTTCTGCCAGATATGGCCCATCAG...ATGACTCAATGCCACAGACATCAGGATCTTTAGGTCCTGGAGGTTCATTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CCA 90 bp TTTTCCAAATTTGTCCCTGGACCTTCCCTCAAGATGGGCTTAGCTAGACTACATGTAACAAATCAGCCATaGAAGTTTCTCCTTCCCTTT +
Preference number: 2 (lower is better)
Translates to: FSKFVPGPSLKMGLARLHVTNQP*KFLLPF
Trigger: AAAGGGAAGGAGAAACTTCCATGGCTGATTTGTTAC...ATGTAGTCTAGCTAAGCCCATCTTGAGGGAAGGTCCAGGGACAAATTTGGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR GCA 90 bp TTCTCCCTCTGTGAGTGCCATCTCAGGGATAATTCAAATCTTTGTCACCTGGAGACCATGTCTTTATTATaGTGTATCAGCATATATGGG +
Preference number: 2 (lower is better)
Translates to: FSLCECHLRDNSNLCHLETMSLL*CISIYG
Trigger: CCCATATATGCTGATACAGCATAATAAAGACATGGT...CTCCAGGTGACAAAGATTTGAATTATCCCTGAGATGGCACTCACAGAGGGAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CCA 90 bp TTTTCCAAATTTGTCCCTGGACCTTCCCTCAAGATGGGCTTAGCTAGACTACATTTACGCCAGGCAGTTTaGACAAGGAGAAAATTTTTA +
Preference number: 2 (lower is better)
Translates to: FSKFVPGPSLKMGLARLHLRQAV*TRRKFL
Trigger: TAAAAATTTTCTCCTTGTCCAAACTGCCTGGCGTAA...ATGTAGTCTAGCTAAGCCCATCTTGAGGGAAGGTCCAGGGACAAATTTGGAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CCA 90 bp TTTTCCAAATTTGTCCCTGGACCTTCCCTCAAGATGGGCTTAGCTAGACTACATTCTGTTGGTCCATATTaGCATATTTTGTGCATCAAA +
Preference number: 2 (lower is better)
Translates to: FSKFVPGPSLKMGLARLHSVGPY*HILCIK
Trigger: TTTGATGCACAAAATATGCCAATATGGACCAACAGA...ATGTAGTCTAGCTAAGCCCATCTTGAGGGAAGGTCCAGGGACAAATTTGGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CCA 90 bp TTTTCCAAATTTGTCCCTGGACCTTCCCTCAAGATGGGCTTAGCTAGACTACATCTTAGGAGCTTAGTTTaGCTAGATATGAAATTCTTG +
Preference number: 2 (lower is better)
Translates to: FSKFVPGPSLKMGLARLHLRSLV*LDMKFL
Trigger: CAAGAATTTCATATCTAGCCAAACTAAGCTCCTAAG...ATGTAGTCTAGCTAAGCCCATCTTGAGGGAAGGTCCAGGGACAAATTTGGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR CAA 90 bp TGTTGGTCCATATTGGCATATTTTGTGCATCAAATCAAGCCTTCTTaGTCCAAAGGCAGTAGGCAGCATGAATTTTGTTATAGTCCATTC +
Preference number: 2 (lower is better)
Translates to: CWSILAYFVHQIKPS*SKGSRQHEFCYSPF
Trigger: GAATGGACTATAACAAAATTCATGCTGCCTACTGCCTTTGGACAAAGAAGGCTTGATTTGATGCACAAAATATGCCAATATGGACCAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR CAA 90 bp TCTGAGATTGTTTCCTCAGCTTGGTTTATTCTGCTCTTAATACTTTaGATTGCATTGTGGAATTCTTGTATTGCGCTATTCAGCTCTGTC +
Preference number: 2 (lower is better)
Translates to: SEIVSSAWFILLLIL*IALWNSCIALFSSV
Trigger: GACAGAGCTGAATAGCGCAATACAAGAATTCCACAATGCAATCAAAAGTATTAAGAGCAGAATAAACCAAGCTGAGGAAACAATCTCAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CCA 90 bp TTTATTATGCTGTATCAGCATATATGGGAGATGATGTTTCTGAACTCCTGGGGGTCTGTTGGTCCATATTaGCATATTTTGTGCATCAAA +
Preference number: 2 (lower is better)
Translates to: FIMLYQHIWEMMFLNSWGSVGPY*HILCIK
Trigger: TTTGATGCACAAAATATGCCAATATGGACCAACAGA...CCCCCAGGAGTTCAGAAACATCATCTCCCATATATGCTGATACAGCATAATAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR CAA 90 bp TTACATTCAAGGTTAATACTGATATGTGTGCATTTGATTCTGTCATaGTGCTGTCAGCTGGTTATTATGTTTACTTGTTTGTGTGGTTGC +
Preference number: 2 (lower is better)
Translates to: LHSRLILICVHLILS*CCQLVIMFTCLCGC
Trigger: GCAACCACACAAACAAGTAAACATAATAACCAGCTGACAGCACAATGACAGAATCAAATGCACACATATCAGTATTAACCTTGAATGTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR CCA 72 bp ATTCAAATCTTTGTCACCTGGAGAGCTTGGTGGGGGTaGCTGCAGGCCCCAGTTGGGAGGTCCTGCCCAGTG +
Preference number: 3 (lower is better)
Translates to: IQIFVTWRAWWG*LQAPVGRSCPV
Trigger: CACTGGGCAGGACCTCCCAACTGGGGCCTGCAGCCACCCCCACCAAGCTCTCCAGGTGACAAAGATTTGAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CAA 90 bp GCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTTTCCTCTCCCCCTGAGTCCAGCATCACACACCTaGGGGGTGGCAGAGCCTGAA +
Preference number: 3 (lower is better)
Translates to: AAVFPLSAQNVWFPLPLSPASHT*GVAEPE
Trigger: TTCAGGCTCTGCCACCCCCAAGGTGTGTGATGCTGG...ACTCAGGGGGAGAGGAAACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CAA 90 bp GCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTTTCCTCTCCCCCTGAGTAGTGGGGCCTGTGGGTaGTTGCTGTTAACACCCCTG +
Preference number: 3 (lower is better)
Translates to: AAVFPLSAQNVWFPLPLSSGACG*LLLTPL
Trigger: CAGGGGTGTTAACAGCAACAACCCACAGGCCCCACT...ACTCAGGGGGAGAGGAAACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CAA 90 bp GCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTTTCCTCTCCCCCTGAGTGCCCAGCTCTTCCCTTaGAGCTCCTTCTTAGGGAGG +
Preference number: 3 (lower is better)
Translates to: AAVFPLSAQNVWFPLPLSAQLFP*SSFLGR
Trigger: CCTCCCTAAGAAGGAGCTCAAAGGGAAGAGCTGGGC...ACTCAGGGGGAGAGGAAACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR CCA 72 bp GGGATAATTCAAATCTTTGTCACCTGGAGAGCTTGGTaGGGGTGGCTGCAGGCCCCAGTTGGGAGGTCCTGC +
Preference number: 3 (lower is better)
Translates to: GIIQIFVTWRAW*GWLQAPVGRSC
Trigger: GCAGGACCTCCCAACTGGGGCCTGCAGCCACCCCCACCAAGCTCTCCAGGTGACAAAGATTTGAATTATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CAA 90 bp GGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAAGGGGCCTGTGGGTTGTaGCTGTTAACACCCCTGGAT +
Preference number: 3 (lower is better)
Translates to: GGGWKPRPEDLPGEKIWEGACGL*LLTPLD
Trigger: ATCCAGGGGTGTTAACAGCAACAACCCACAGGCCCC...TTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR GCA 72 bp TCCACCCCAGAGAGATGCAGGTCAGCAATCGCTCAGTaGAGCCAGCCCAAGATAGAGGGTATGTGTTGTGGG +
Preference number: 3 (lower is better)
Translates to: STPERCRSAIAQ*SQPKIEGMCCG
Trigger: CCCACAACACATACCCTCTATCTTGGGCTGGCTGCACTGAGCGATTGCTGACCTGCATCTCTCTGGGGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR CCA 72 bp CCTCTGAGAGCTTTGTCCCAGGGAGGTATGCAGTTTTaGTGGCCCAAAGCAGCTGTAGGAAGTGGCTGGAGA +
Preference number: 3 (lower is better)
Translates to: PLRALSQGGMQF*WPKAAVGSGWR
Trigger: TCTCCAGCCACTTCCTACAGCTGCTTTGGGCCACCAAAACTGCATACCTCCCTGGGACAAAGCTCTCAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR CCA 72 bp GGCTGCTGTTTTATGCTTGGGGGCTGCTCCAGTACCTaGTCACCTCAGATTTCCCAGAACCTGGAGGTGTCA +
Preference number: 3 (lower is better)
Translates to: GCCFMLGGCSST*SPQISQNLEVS
Trigger: TGACACCTCCAGGTTCTGGGAAATCTGAGGTGACCAGGTACTGGAGCAGCCCCCAAGCATAAAACAGCAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CAA 90 bp CCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAATGGAAACCCACGAAACCCAGCATCACACACCTaGGGGGTGGCAGAGCCTGAA +
Preference number: 3 (lower is better)
Translates to: PGLKIFLVRRYGNGNPRNPASHT*GVAEPE
Trigger: TTCAGGCTCTGCCACCCCCAAGGTGTGTGATGCTGG...GTTTCGTGGGTTTCCATTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CAA 90 bp GGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAACAGTCTGGCCACGTTTaGGTAGAACAGCTGTGCTGT +
Preference number: 3 (lower is better)
Translates to: GGGWKPRPEDLPGEKIWEQSGHV*VEQLCC
Trigger: ACAGCACAGCTGTTCTACCAAAACGTGGCCAGACTG...TTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CAA 90 bp GGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAAAGCAAAGACAGTGGCTaGTCCCTTCCTCTGAGAGCT +
Preference number: 3 (lower is better)
Translates to: GGGWKPRPEDLPGEKIWESKDSG*SLPLRA
Trigger: AGCTCTCAGAGGAAGGGACAAGCCACTGTCTTTGCT...TTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR CCA 72 bp AGTGCCATCTCAGGGATAATTCAAATCTTTGTCACCTaGAGAGCTTGGTGGGGGTGGCTGCAGGCCCCAGTT +
Preference number: 3 (lower is better)
Translates to: SAISGIIQIFVT*RAWWGWLQAPV
Trigger: AACTGGGGCCTGCAGCCACCCCCACCAAGCTCTCCAGGTGACAAAGATTTGAATTATCCCTGAGATGGCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR CCA 72 bp TATGCAGTTTTGGTGGCCCAAAGCAGCTGTAGGAAGTaGCTGGAGAGCCTAGTTGAGAGGTTCCACCCAGTG +
Preference number: 3 (lower is better)
Translates to: YAVLVAQSSCRK*LESLVERFHPV
Trigger: CACTGGGTGGAACCTCTCAACTAGGCTCTCCAGCCACTTCCTACAGCTGCTTTGGGCCACCAAAACTGCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR CCA 72 bp GTGTCACCAGTGAAGGCTGTGAAACAGCAAAGACAGTaGCTTGTCCCTTCCTCTGAGAGCTTTGTCCCAGGG +
Preference number: 3 (lower is better)
Translates to: VSPVKAVKQQRQ*LVPSSESFVPG
Trigger: CCCTGGGACAAAGCTCTCAGAGGAAGGGACAAGCCACTGTCTTTGCTGTTTCACAGCCTTCACTGGTGACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR CCA 72 bp TGGAGCGTGTCAAGGGCAGTTCCACTGCAGAGGCAGTaGCATAGAAACTTTCTGTTGACCTCGGAAGCTCTG +
Preference number: 3 (lower is better)
Translates to: WSVSRAVPLQRQ*HRNFLLTSEAL
Trigger: CAGAGCTTCCGAGGTCAACAGAAAGTTTCTATGCCACTGCCTCTGCAGTGGAACTGCCCTTGACACGCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CAA 90 bp GCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTTTCCTCTCCCCCTGAGTCAAATCAAGCCTTCTTaGTCCAAAGGCAGTAGGCAG +
Preference number: 3 (lower is better)
Translates to: AAVFPLSAQNVWFPLPLSQIKPS*SKGSRQ
Trigger: CTGCCTACTGCCTTTGGACAAAGAAGGCTTGATTTG...ACTCAGGGGGAGAGGAAACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CAA 90 bp GTGTCACCAGTGAAGGCTGTGAAACAGCAAAGACAGTGGCTTGTCCCTTCCTCTTTCTGGTCAGCCATCTaGCCCACTCCTCCACTTCTC +
Preference number: 3 (lower is better)
Translates to: VSPVKAVKQQRQWLVPSSFWSAI*PTPPLL
Trigger: GAGAAGTGGAGGAGTGGGCAAGATGGCTGACCAGAA...AGAGGAAGGGACAAGCCACTGTCTTTGCTGTTTCACAGCCTTCACTGGTGACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CAA 90 bp TTTTCCAAATTTGTCCCTGGACCTTCCCTCAAGATGGGCTTAGCTAGACTACATTGTCACCTGGAGAGCTaGGTGGGGGTGGCTGCAGGC +
Preference number: 3 (lower is better)
Translates to: FSKFVPGPSLKMGLARLHCHLES*VGVAAG
Trigger: GCCTGCAGCCACCCCCACCAAGCTCTCCAGGTGACA...ATGTAGTCTAGCTAAGCCCATCTTGAGGGAAGGTCCAGGGACAAATTTGGAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR TCA 72 bp CCTGGTGGAGTGGGTTCACAAGGAGATCTCCTGACTTaGGGGTTGCAAAGACCTAATGCTCACCCCTTCTGT +
Preference number: 3 (lower is better)
Translates to: PGGVGSQGDLLT*GLQRPNAHPFC
Trigger: ACAGAAGGGGTGAGCATTAGGTCTTTGCAACCCTCAAGTCAGGAGATCTCCTTGTGAACCCACTCCACCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR TCA 72 bp AAAGCCCTGGTGGAGTGGGTTCACAAGGAGATCTCCTaGCTTGAGGGTTGCAAAGACCTAATGCTCACCCCT +
Preference number: 3 (lower is better)
Translates to: KALVEWVHKEIS*LEGCKDLMLTP
Trigger: AGGGGTGAGCATTAGGTCTTTGCAACCCTCAAGTCAGGAGATCTCCTTGTGAACCCACTCCACCAGGGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR CCA 72 bp GTCTGGCCACGTTTTGGTAGAACAGCTGTGCTGTGTTaGGGGTCTACTTCAGTCCTCAGTCGTCTCAGATAC +
Preference number: 3 (lower is better)
Translates to: VWPRFGRTAVLC*GSTSVLSRLRY
Trigger: GTATCTGAGACGACTGAGGACTGAAGTAGACCCCCAACACAGCACAGCTGTTCTACCAAAACGTGGCCAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR CCA 72 bp TTTGATACTGGCTTGATAGTTCTGGCTGGTGGTGGCTaGAAGCCCAGGCCTGAAGATCTTCCTGGTGAGAAG +
Preference number: 3 (lower is better)
Translates to: FDTGLIVLAGGG*KPRPEDLPGEK
Trigger: CTTCTCACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACCAGCCAGAACTATCAAGCCAGTATCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR CCA 72 bp GTAATGGTTGTGGCTAAGGGTCATTTGTTTGACTCCTaGGGGCTCCACCCCAGAGAGATGCAGGTCAGCAAT +
Preference number: 3 (lower is better)
Translates to: VMVVAKGHLFDS*GLHPREMQVSN
Trigger: ATTGCTGACCTGCATCTCTCTGGGGTGGAGCCCCCAGGAGTCAAACAAATGACCCTTAGCCACAACCATTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CAA 90 bp TTGATAGTTCTGGCTGGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTCTGATGTCTGTGGCATaGAGTCATCTGTTGGTCCAT +
Preference number: 3 (lower is better)
Translates to: LIVLAGGGWKPRPEDLPGLMSVA*SHLLVH
Trigger: ATGGACCAACAGATGACTCAATGCCACAGACATCAG...ACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACCAGCCAGAACTATCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CAA 90 bp TATGTTTCCTCACATTTGCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTGGGGCCTGTGGGTTGTaGCTGTTAACACCCCTGGAT +
Preference number: 3 (lower is better)
Translates to: YVSSHLQLCSLSVLRTCGGACGL*LLTPLD
Trigger: ATCCAGGGGTGTTAACAGCAACAACCCACAGGCCCC...ACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGCAAATGTGAGGAAACATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CAA 90 bp GCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTTTCCTCTCCCCCTGAGTCCACAGTATCAGATGTaGCTATTGGCTGTGAACTTT +
Preference number: 3 (lower is better)
Translates to: AAVFPLSAQNVWFPLPLSPQYQM*LLAVNF
Trigger: AAAGTTCACAGCCAATAGCAACATCTGATACTGTGG...ACTCAGGGGGAGAGGAAACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CAA 90 bp TATGTTTCCTCACATTTGCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTTTCTGGTCAGCCATCTaGCCCACTCCTCCACTTCTC +
Preference number: 3 (lower is better)
Translates to: YVSSHLQLCSLSVLRTCGFWSAI*PTPPLL
Trigger: GAGAAGTGGAGGAGTGGGCAAGATGGCTGACCAGAA...ACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGCAAATGTGAGGAAACATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CAA 90 bp TATGTTTCCTCACATTTGCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTCTTCCTCTGAGAGCTTaGTCCCAGGGAGGTATGCAG +
Preference number: 3 (lower is better)
Translates to: YVSSHLQLCSLSVLRTCGLPLRA*SQGGMQ
Trigger: CTGCATACCTCCCTGGGACAAAGCTCTCAGAGGAAG...ACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGCAAATGTGAGGAAACATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR GCA 72 bp CAGCCACACACACTAGCTGCTTCTGGTCAGCCATCTTaGCCACTCCTCCACTTCTCCTCTAGTTTTCTTAAG +
Preference number: 3 (lower is better)
Translates to: QPHTLAASGQPS*PLLHFSSSFLK
Trigger: CTTAAGAAAACTAGAGGAGAAGTGGAGGAGTGGGCAAGATGGCTGACCAGAAGCAGCTAGTGTGTGTGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR GCA 72 bp GTTCTGTTGTGTGGCTCCCCTATGTTTCCTCACATTTaGAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTG +
Preference number: 3 (lower is better)
Translates to: VLLCGSPMFPHI*SCVPSQCSERV
Trigger: CACACGTTCTGAGCACTGAGAGGGAACACAGCTGCAAATGTGAGGAAACATAGGGGAGCCACACAACAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR CCA 72 bp ATTCCAAGCCAGTGGATCTTATCTTGTGAGGTGGCATaGAAGTGGGGCCTGTGGGTTGTTGCTGTTAACACC +
Preference number: 3 (lower is better)
Translates to: IPSQWILSCEVA*KWGLWVVAVNT
Trigger: GGTGTTAACAGCAACAACCCACAGGCCCCACTTCCATGCCACCTCACAAGATAAGATCCACTGGCTTGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR CCA 72 bp GTGGGACCCGTGGGAGACAGACCAGCCTCTTCTCCTTaGGTTGACTACAGATTATTAGAGGTGTGGATAAAG +
Preference number: 3 (lower is better)
Translates to: VGPVGDRPASSP*VDYRLLEVWIK
Trigger: CTTTATCCACACCTCTAATAATCTGTAGTCAACCCAAGGAGAAGAGGCTGGTCTGTCTCCCACGGGTCCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CAA 90 bp GGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAAAGAAGGGAGGAGGCTTaGATATCTGCAATGTTAGTT +
Preference number: 3 (lower is better)
Translates to: GGGWKPRPEDLPGEKIWERREEA*ISAMLV
Trigger: AACTAACATTGCAGATATCAAAGCCTCCTCCCTTCT...TTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CAA 90 bp TTTTCCAAATTTGTCCCTGGACCTTCCCTCAAGATGGGCTTAGCTAGACTACATAGTGGGGCCTGTGGGTaGTTGCTGTTAACACCCCTG +
Preference number: 3 (lower is better)
Translates to: FSKFVPGPSLKMGLARLHSGACG*LLLTPL
Trigger: CAGGGGTGTTAACAGCAACAACCCACAGGCCCCACT...ATGTAGTCTAGCTAAGCCCATCTTGAGGGAAGGTCCAGGGACAAATTTGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CAA 90 bp TATGTTTCCTCACATTTGCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTAGCAAAGACAGTGGCTaGTCCCTTCCTCTGAGAGCT +
Preference number: 3 (lower is better)
Translates to: YVSSHLQLCSLSVLRTCGSKDSG*SLPLRA
Trigger: AGCTCTCAGAGGAAGGGACAAGCCACTGTCTTTGCT...ACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGCAAATGTGAGGAAACATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CAA 90 bp GCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTTTCCTCTCCCCCTGAGTATCTGTTGGTCCATATaGGCATATTTTGTGCATCAA +
Preference number: 3 (lower is better)
Translates to: AAVFPLSAQNVWFPLPLSICWSI*AYFVHQ
Trigger: TTGATGCACAAAATATGCCAATATGGACCAACAGAT...ACTCAGGGGGAGAGGAAACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CAA 90 bp GCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTTTCCTCTCCCCCTGAGTGTTAGCTTGTCTAGGTaGAGCTTGACTGAAATATAT +
Preference number: 3 (lower is better)
Translates to: AAVFPLSAQNVWFPLPLSVSLSR*SLTEIY
Trigger: ATATATTTCAGTCAAGCTCAACCTAGACAAGCTAAC...ACTCAGGGGGAGAGGAAACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CAA 90 bp CCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAATGGAAACCCACGAAACAGGATTAGGAACCACTaGAAAAAGCAGTCTGGCCAC +
Preference number: 3 (lower is better)
Translates to: PGLKIFLVRRYGNGNPRNRIRNH*KKQSGH
Trigger: GTGGCCAGACTGCTTTTTCAAGTGGTTCCTAATCCT...GTTTCGTGGGTTTCCATTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR TCA 72 bp ACCCGTGGGAGACAGACCAGCCTCTTCTCCTTGGGTTaGCTACAGATTATTAGAGGTGTGGATAAAGCACTT +
Preference number: 3 (lower is better)
Translates to: TRGRQTSLFSLG*LQIIRGVDKAL
Trigger: AAGTGCTTTATCCACACCTCTAATAATCTGTAGTCAACCCAAGGAGAAGAGGCTGGTCTGTCTCCCACGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR CCA 72 bp TATCAGCATATATGGGAGATGATGTTTCTGAACTCCTaGGGGTCTGTGCCAGGCCTCATTTCTGTAGTGGCA +
Preference number: 3 (lower is better)
Translates to: YQHIWEMMFLNS*GSVPGLISVVA
Trigger: TGCCACTACAGAAATGAGGCCTGGCACAGACCCCCAGGAGTTCAGAAACATCATCTCCCATATATGCTGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR CCA 72 bp CTTACAGGACAGCTGGAAGACTCTTGTTCTGTTGTGTaGCTCCCCTATGTTTCCTCACATTTGCAGCTGTGT +
Preference number: 3 (lower is better)
Translates to: LTGQLEDSCSVV*LPYVSSHLQLC
Trigger: ACACAGCTGCAAATGTGAGGAAACATAGGGGAGCCACACAACAGAACAAGAGTCTTCCAGCTGTCCTGTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CAA 90 bp GGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAAATCTGTTGGTCCATATaGGCATATTTTGTGCATCAA +
Preference number: 3 (lower is better)
Translates to: GGGWKPRPEDLPGEKIWEICWSI*AYFVHQ
Trigger: TTGATGCACAAAATATGCCAATATGGACCAACAGAT...TTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CAA 90 bp TTGATAGTTCTGGCTGGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTTTGTCTAGGTTGAGCTaGACTGAAATATATTTGACC +
Preference number: 3 (lower is better)
Translates to: LIVLAGGGWKPRPEDLPGLSRLS*TEIYLT
Trigger: GGTCAAATATATTTCAGTCAAGCTCAACCTAGACAA...ACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACCAGCCAGAACTATCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CAA 90 bp TTTTCCAAATTTGTCCCTGGACCTTCCCTCAAGATGGGCTTAGCTAGACTACATCAGTCTGGCCACGTTTaGGTAGAACAGCTGTGCTGT +
Preference number: 3 (lower is better)
Translates to: FSKFVPGPSLKMGLARLHQSGHV*VEQLCC
Trigger: ACAGCACAGCTGTTCTACCAAAACGTGGCCAGACTG...ATGTAGTCTAGCTAAGCCCATCTTGAGGGAAGGTCCAGGGACAAATTTGGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CAA 90 bp TTTTCCAAATTTGTCCCTGGACCTTCCCTCAAGATGGGCTTAGCTAGACTACATGCTCTGGGGAGATCTTaGTGTTTACGTTCCTTCCCC +
Preference number: 3 (lower is better)
Translates to: FSKFVPGPSLKMGLARLHALGRS*CLRSFP
Trigger: GGGGAAGGAACGTAAACACAAAGATCTCCCCAGAGC...ATGTAGTCTAGCTAAGCCCATCTTGAGGGAAGGTCCAGGGACAAATTTGGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CAA 90 bp TTCTCCCTCTGTGAGTGCCATCTCAGGGATAATTCAAATCTTTGTCACCTGGAGCTGATGTCTGTGGCATaGAGTCATCTGTTGGTCCAT +
Preference number: 3 (lower is better)
Translates to: FSLCECHLRDNSNLCHLELMSVA*SHLLVH
Trigger: ATGGACCAACAGATGACTCAATGCCACAGACATCAG...CTCCAGGTGACAAAGATTTGAATTATCCCTGAGATGGCACTCACAGAGGGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CAA 90 bp GTGTCACCAGTGAAGGCTGTGAAACAGCAAAGACAGTGGCTTGTCCCTTCCTCTTTTACGCCAGGCAGTTaGGACAAGGAGAAAATTTTT +
Preference number: 3 (lower is better)
Translates to: VSPVKAVKQQRQWLVPSSFTPGS*DKEKIF
Trigger: AAAAATTTTCTCCTTGTCCAAACTGCCTGGCGTAAA...AGAGGAAGGGACAAGCCACTGTCTTTGCTGTTTCACAGCCTTCACTGGTGACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CAA 90 bp TTCTCCCTCTGTGAGTGCCATCTCAGGGATAATTCAAATCTTTGTCACCTGGAGATAGTCTGGCTATGTTaGGGTAGAGCAGCTGTGTTG +
Preference number: 3 (lower is better)
Translates to: FSLCECHLRDNSNLCHLEIVWLC*GRAAVL
Trigger: CAACACAGCTGCTCTACCCAAACATAGCCAGACTAT...CTCCAGGTGACAAAGATTTGAATTATCCCTGAGATGGCACTCACAGAGGGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR TCA 72 bp TTTCACTGGGCCAAGGCTTTGTGTAGGGTCTGTGTTTaGTGCTCACTTCTTATCTCTTGTTTCAGAGGGGGA +
Preference number: 3 (lower is better)
Translates to: FHWAKALCRVCV*CSLLISCFRGG
Trigger: TCCCCCTCTGAAACAAGAGATAAGAAGTGAGCATCAAACACAGACCCTACACAAAGCCTTGGCCCAGTGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR CCA 72 bp AGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAATaGAAACCCACGAAACACTCTGGCCACTTTTCCATA +
Preference number: 3 (lower is better)
Translates to: RPEDLPGEKIWE*KPTKHSGHFSI
Trigger: TATGGAAAAGTGGCCAGAGTGTTTCGTGGGTTTCCATTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CAA 90 bp TTCTCCCTCTGTGAGTGCCATCTCAGGGATAATTCAAATCTTTGTCACCTGGAGGCAGGAACCATATCCTaGTTTCTATCCCACTTCATG +
Preference number: 3 (lower is better)
Translates to: FSLCECHLRDNSNLCHLEAGTIS*FLSHFM
Trigger: CATGAAGTGGGATAGAAACAAGGATATGGTTCCTGC...CTCCAGGTGACAAAGATTTGAATTATCCCTGAGATGGCACTCACAGAGGGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CAA 90 bp TTTTCCAAATTTGTCCCTGGACCTTCCCTCAAGATGGGCTTAGCTAGACTACATATAGTCTGGCTATGTTaGGGTAGAGCAGCTGTGTTG +
Preference number: 3 (lower is better)
Translates to: FSKFVPGPSLKMGLARLHIVWLC*GRAAVL
Trigger: CAACACAGCTGCTCTACCCAAACATAGCCAGACTAT...ATGTAGTCTAGCTAAGCCCATCTTGAGGGAAGGTCCAGGGACAAATTTGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR TCA 72 bp CTTCCCTTTATTTTGAGCCTGTGTGTGTCTTACATGTaGGACGGGTCTCTTGAAGACAGCATACCATTGGGT +
Preference number: 3 (lower is better)
Translates to: LPFILSLCVSYM*DGSLEDSIPLG
Trigger: ACCCAATGGTATGCTGTCTTCAAGAGACCCGTCTCACATGTAAGACACACACAGGCTCAAAATAAAGGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR TCA 72 bp CAAATCAGCCATGGAAGTTTCTCCTTCCCTTTATTTTaGGCCTGTGTGTGTCTTACATGTGAGACGGGTCTC +
Preference number: 3 (lower is better)
Translates to: QISHGSFSFPLF*ACVCLTCETGL
Trigger: GAGACCCGTCTCACATGTAAGACACACACAGGCTCAAAATAAAGGGAAGGAGAAACTTCCATGGCTGATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR CCA 72 bp CATTCTAGCCAGTTTGGCCTGGTTAAGGACCTTTGCTaGAGAACTGGTGTGATCATTTGGAGGACATATGAT +
Preference number: 3 (lower is better)
Translates to: HSSQFGLVKDLC*RTGVIIWRTYD
Trigger: ATCATATGTCCTCCAAATGATCACACCAGTTCTCCAGCAAAGGTCCTTAACCAGGCCAAACTGGCTAGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CAA 90 bp TATGTTTCCTCACATTTGCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTTTTACGCCAGGCAGTTaGGACAAGGAGAAAATTTTT +
Preference number: 3 (lower is better)
Translates to: YVSSHLQLCSLSVLRTCGFTPGS*DKEKIF
Trigger: AAAAATTTTCTCCTTGTCCAAACTGCCTGGCGTAAA...ACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGCAAATGTGAGGAAACATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CAA 90 bp TTTTCCAAATTTGTCCCTGGACCTTCCCTCAAGATGGGCTTAGCTAGACTACATTCCTCTCTAGCAAGGTaGGGGATATTTTCATGGACA +
Preference number: 3 (lower is better)
Translates to: FSKFVPGPSLKMGLARLHSSLAR*GIFSWT
Trigger: TGTCCATGAAAATATCCCCAACCTTGCTAGAGAGGA...ATGTAGTCTAGCTAAGCCCATCTTGAGGGAAGGTCCAGGGACAAATTTGGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CAA 90 bp AAAATAATGAACCTCCAGGACCTAAAGATCCTGATGTCTGTGGCATTGAGTCATCAAATCAAGCCTTCTTaGTCCAAAGGCAGTAGGCAG +
Preference number: 3 (lower is better)
Translates to: KIMNLQDLKILMSVALSHQIKPS*SKGSRQ
Trigger: CTGCCTACTGCCTTTGGACAAAGAAGGCTTGATTTG...ATGACTCAATGCCACAGACATCAGGATCTTTAGGTCCTGGAGGTTCATTATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CAA 90 bp TTCTCCCTCTGTGAGTGCCATCTCAGGGATAATTCAAATCTTTGTCACCTGGAGGCATTGAGTCATCTGTaGGTCCATATTGGCATATTT +
Preference number: 3 (lower is better)
Translates to: FSLCECHLRDNSNLCHLEALSHL*VHIGIF
Trigger: AAATATGCCAATATGGACCAACAGATGACTCAATGC...CTCCAGGTGACAAAGATTTGAATTATCCCTGAGATGGCACTCACAGAGGGAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CAA 90 bp TTCTCCCTCTGTGAGTGCCATCTCAGGGATAATTCAAATCTTTGTCACCTGGAGTGCAGCTATCTCATGTaGCTCTTTCTTAAAGACACA +
Preference number: 3 (lower is better)
Translates to: FSLCECHLRDNSNLCHLECSYLM*LFLKDT
Trigger: TGTGTCTTTAAGAAAGAGCAACATGAGATAGCTGCA...CTCCAGGTGACAAAGATTTGAATTATCCCTGAGATGGCACTCACAGAGGGAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CAA 90 bp TTTTCCAAATTTGTCCCTGGACCTTCCCTCAAGATGGGCTTAGCTAGACTACATCCACAGTATCAGATGTaGCTATTGGCTGTGAACTTT +
Preference number: 3 (lower is better)
Translates to: FSKFVPGPSLKMGLARLHPQYQM*LLAVNF
Trigger: AAAGTTCACAGCCAATAGCAACATCTGATACTGTGG...ATGTAGTCTAGCTAAGCCCATCTTGAGGGAAGGTCCAGGGACAAATTTGGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CAA 90 bp TTTTCCAAATTTGTCCCTGGACCTTCCCTCAAGATGGGCTTAGCTAGACTACATTGCAGCTATCTCATGTaGCTCTTTCTTAAAGACACA +
Preference number: 3 (lower is better)
Translates to: FSKFVPGPSLKMGLARLHCSYLM*LFLKDT
Trigger: TGTGTCTTTAAGAAAGAGCAACATGAGATAGCTGCA...ATGTAGTCTAGCTAAGCCCATCTTGAGGGAAGGTCCAGGGACAAATTTGGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CAA 90 bp TTTTCCAAATTTGTCCCTGGACCTTCCCTCAAGATGGGCTTAGCTAGACTACATCTGTATTTACTGAATTaGACTGTTGTCCTCTCTAGC +
Preference number: 3 (lower is better)
Translates to: FSKFVPGPSLKMGLARLHLYLLN*TVVLSS
Trigger: GCTAGAGAGGACAACAGTCAAATTCAGTAAATACAG...ATGTAGTCTAGCTAAGCCCATCTTGAGGGAAGGTCCAGGGACAAATTTGGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CAA 90 bp TTTTCCAAATTTGTCCCTGGACCTTCCCTCAAGATGGGCTTAGCTAGACTACATCTGATATGTGTGCATTaGATTCTGTCATTGTGCTGT +
Preference number: 3 (lower is better)
Translates to: FSKFVPGPSLKMGLARLHLICVH*ILSLCC
Trigger: ACAGCACAATGACAGAATCAAATGCACACATATCAG...ATGTAGTCTAGCTAAGCCCATCTTGAGGGAAGGTCCAGGGACAAATTTGGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CAA 90 bp TTTTCCAAATTTGTCCCTGGACCTTCCCTCAAGATGGGCTTAGCTAGACTACATTTGTCTAGGTTGAGCTaGACTGAAATATATTTGACC +
Preference number: 3 (lower is better)
Translates to: FSKFVPGPSLKMGLARLHLSRLS*TEIYLT
Trigger: GGTCAAATATATTTCAGTCAAGCTCAACCTAGACAA...ATGTAGTCTAGCTAAGCCCATCTTGAGGGAAGGTCCAGGGACAAATTTGGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR-3UTR CAA 90 bp TTTTCCAAATTTGTCCCTGGACCTTCCCTCAAGATGGGCTTAGCTAGACTACATCATAACCCATACTTCTaGGAGGCTTTGTTTATTTCT +
Preference number: 3 (lower is better)
Translates to: FSKFVPGPSLKMGLARLHHNPYF*EALFIS
Trigger: AGAAATAAACAAAGCCTCCAAGAAGTATGGGTTATG...ATGTAGTCTAGCTAAGCCCATCTTGAGGGAAGGTCCAGGGACAAATTTGGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR TCA 72 bp CCATTCATTATCATATTTTGTGGGTTAGGGAGATTCTaGTGGGCCATATCTGGCAGAAATCTCAGAATCTGT +
Preference number: 3 (lower is better)
Translates to: PFIIIFCGLGRF*WAISGRNLRIC
Trigger: ACAGATTCTGAGATTTCTGCCAGATATGGCCCATCAGAATCTCCCTAACCCACAAAATATGATAATGAATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR TCA 72 bp TTGCTGGAGAACTGGTGTGATCATTTGGAGGACATATaGTATTTTGGCCATTTGAGTTACCAGAGTTCTTAC +
Preference number: 3 (lower is better)
Translates to: LLENWCDHLEDI*YFGHLSYQSSY
Trigger: GTAAGAACTCTGGTAACTCAAATGGCCAAAATATCATATGTCCTCCAAATGATCACACCAGTTCTCCAGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR GCA 72 bp AAGGCAGGTCTGGTGGTAATGAAGTCCCTCAACATTTaGTTATCTGAGAAGGATTGTATTATTCCTTCACTT +
Preference number: 3 (lower is better)
Translates to: KAGLVVMKSLNI*LSEKDCIIPSL
Trigger: AAGTGAAGGAATAATACAATCCTTCTCAGATAAGCAAATGTTGAGGGACTTCATTACCACCAGACCTGCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR TCA 72 bp GCGTTTATTATATGCTGGGGTCCCTATTCTGAGTTTTaGATAAGTATCAGCTCAATAATCCTAAACAACTCC +
Preference number: 3 (lower is better)
Translates to: AFIICWGPYSEF*ISISSIILNNS
Trigger: GGAGTTGTTTAGGATTATTGAGCTGATACTTATTCAAAACTCAGAATAGGGACCCCAGCATATAATAAACGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR GCA 72 bp CTCAGCTTGGTTTATTCTGCTCTTAATACTTTTGATTaGATTGTGGAATTCTTGTATTGCGCTATTCAGCTC +
Preference number: 3 (lower is better)
Translates to: LSLVYSALNTFD*IVEFLYCAIQL
Trigger: GAGCTGAATAGCGCAATACAAGAATTCCACAATGCAATCAAAAGTATTAAGAGCAGAATAAACCAAGCTGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR CCA 72 bp GAACCAGCATCAAGTTCTGAGATTGTTTCCTCAGCTTaGTTTATTCTGCTCTTAATACTTTTGATTGCATTG +
Preference number: 3 (lower is better)
Translates to: EPASSSEIVSSA*FILLLILLIAL
Trigger: CAATGCAATCAAAAGTATTAAGAGCAGAATAAACCAAGCTGAGGAAACAATCTCAGAACTTGATGCTGGTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR TCA 72 bp AACTACTGCTGTATAACAAACTGCAAAATCCAGTGCTaGCTGCAACATTCATTTATTATCACTCACATATCC +
Preference number: 3 (lower is better)
Translates to: NYCCITNCKIQC*LQHSFIITHIS
Trigger: GGATATGTGAGTGATAATAAATGAATGTTGCAGTCAGCACTGGATTTTGCAGTTTGTTATACAGCAGTAGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR TCA 72 bp ACGTATAGCGTTTATTATATGCTGGGGTCCCTATTCTaGGTTTTGAATAAGTATCAGCTCAATAATCCTAAA +
Preference number: 3 (lower is better)
Translates to: TYSVYYMLGSLF*VLNKYQLNNPK
Trigger: TTTAGGATTATTGAGCTGATACTTATTCAAAACTCAGAATAGGGACCCCAGCATATAATAAACGCTATACGT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp GCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTTTCCTCTCCCCCTGAGTGTCACCTGGAGAGCTTaGTGGGGGTGGCTGCAGGCC +
Preference number: 4 (lower is better)
Translates to: AAVFPLSAQNVWFPLPLSVTWRA*WGWLQA
Trigger: GGCCTGCAGCCACCCCCACCAAGCTCTCCAGGTGAC...ACTCAGGGGGAGAGGAAACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR GCA 90 bp GGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAACTTGGTGGGGGTGGCTaGAGGCCCCAGTTGGGAGGT +
Preference number: 4 (lower is better)
Translates to: GGGWKPRPEDLPGEKIWELGGGG*RPQLGG
Trigger: ACCTCCCAACTGGGGCCTGCAGCCACCCCCACCAAG...TTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR GCA 90 bp GCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTTTCCTCTCCCCCTGAGTCACTCCTGGGCTGCCTaGTGCAGCTCTGGGGAGATC +
Preference number: 4 (lower is better)
Translates to: AAVFPLSAQNVWFPLPLSHSWAA*CSSGEI
Trigger: GATCTCCCCAGAGCTGCAGCAGGCAGCCCAGGAGTG...ACTCAGGGGGAGAGGAAACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp GCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTTTCCTCTCCCCCTGAGTGCTGCAGGCCCCAGTTaGGAGGTCCTGCCCAGTGAA +
Preference number: 4 (lower is better)
Translates to: AAVFPLSAQNVWFPLPLSAAGPS*EVLPSE
Trigger: TTCACTGGGCAGGACCTCCCAACTGGGGCCTGCAGC...ACTCAGGGGGAGAGGAAACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp GGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAAGTCACCTGGAGAGCTTaGTGGGGGTGGCTGCAGGCC +
Preference number: 4 (lower is better)
Translates to: GGGWKPRPEDLPGEKIWEVTWRA*WGWLQA
Trigger: GGCCTGCAGCCACCCCCACCAAGCTCTCCAGGTGAC...TTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR GCA 90 bp TTGATAGTTCTGGCTGGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTCACTCCTGGGCTGCCTaGTGCAGCTCTGGGGAGATC +
Preference number: 4 (lower is better)
Translates to: LIVLAGGGWKPRPEDLPGHSWAA*CSSGEI
Trigger: GATCTCCCCAGAGCTGCAGCAGGCAGCCCAGGAGTG...ACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACCAGCCAGAACTATCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR TCA 90 bp GCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTTTCCTCTCCCCCTGAGTGGGGGTGGCAGAGCCTaGATTTTACGCCAGGCAGTT +
Preference number: 4 (lower is better)
Translates to: AAVFPLSAQNVWFPLPLSGGGRA*ILRQAV
Trigger: AACTGCCTGGCGTAAAATTCAGGCTCTGCCACCCCC...ACTCAGGGGGAGAGGAAACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR TCA 90 bp TTGATAGTTCTGGCTGGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTGACTCCATGCTGGCCTaGGTGGCTGCTCTGCCAAGA +
Preference number: 4 (lower is better)
Translates to: LIVLAGGGWKPRPEDLPGDSMLA*VAALPR
Trigger: TCTTGGCAGAGCAGCCACTCAGGCCAGCATGGAGTC...ACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACCAGCCAGAACTATCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp GTGTCACCAGTGAAGGCTGTGAAACAGCAAAGACAGTGGCTTGTCCCTTCCTCTACCTGGAGAGCTTGGTaGGGGTGGCTGCAGGCCCCA +
Preference number: 4 (lower is better)
Translates to: VSPVKAVKQQRQWLVPSSTWRAW*GWLQAP
Trigger: TGGGGCCTGCAGCCACCCCCACCAAGCTCTCCAGGT...AGAGGAAGGGACAAGCCACTGTCTTTGCTGTTTCACAGCCTTCACTGGTGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp GGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAAGGTGTGTGGGACCCGTaGGAGACAGACCAGCCTCTT +
Preference number: 4 (lower is better)
Translates to: GGGWKPRPEDLPGEKIWEGVWDP*ETDQPL
Trigger: AAGAGGCTGGTCTGTCTCCCACGGGTCCCACACACC...TTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp TTGATAGTTCTGGCTGGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTTCTGGTGATGAGTGGTaGGGGGTGTGTGGGACCCGT +
Preference number: 4 (lower is better)
Translates to: LIVLAGGGWKPRPEDLPGSGDEW*GVCGTR
Trigger: ACGGGTCCCACACACCCCCCACCACTCATCACCAGA...ACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACCAGCCAGAACTATCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR TCA 90 bp GGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAAGCTGCCTGTAGTTCCTaGTTCAGCACTCCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: GGGWKPRPEDLPGEKIWEAACSS*FSTPGL
Trigger: CAGCCCAGGAGTGCTGAATCAGGAACTACAGGCAGC...TTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR TCA 90 bp GCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTTTCCTCTCCCCCTGAGTGGTCTGCTGTTAGCCTaGCGGGGATCCCTTTGTAGA +
Preference number: 4 (lower is better)
Translates to: AAVFPLSAQNVWFPLPLSGLLLA*RGSLCR
Trigger: TCTACAAAGGGATCCCCGTCAGGCTAACAGCAGACC...ACTCAGGGGGAGAGGAAACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR GCA 90 bp TTGATAGTTCTGGCTGGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTTCCTGGGCTGCCTGCTaGAGCTCTGGGGAGATCTTT +
Preference number: 4 (lower is better)
Translates to: LIVLAGGGWKPRPEDLPGSWAAC*SSGEIF
Trigger: AAAGATCTCCCCAGAGCTGCAGCAGGCAGCCCAGGA...ACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACCAGCCAGAACTATCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp GTGTCACCAGTGAAGGCTGTGAAACAGCAAAGACAGTGGCTTGTCCCTTCCTCTGCTGCAGGCCCCAGTTaGGAGGTCCTGCCCAGTGAA +
Preference number: 4 (lower is better)
Translates to: VSPVKAVKQQRQWLVPSSAAGPS*EVLPSE
Trigger: TTCACTGGGCAGGACCTCCCAACTGGGGCCTGCAGC...AGAGGAAGGGACAAGCCACTGTCTTTGCTGTTTCACAGCCTTCACTGGTGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp CCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAATGGAAACCCACGAAACAGAGCTTGGTGGGGGTaGCTGCAGGCCCCAGTTGGG +
Preference number: 4 (lower is better)
Translates to: PGLKIFLVRRYGNGNPRNRAWWG*LQAPVG
Trigger: CCCAACTGGGGCCTGCAGCCACCCCCACCAAGCTCT...GTTTCGTGGGTTTCCATTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR TCA 90 bp GCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTTTCCTCTCCCCCTGAGTGTGAGACGGGTCTCTTaGAGACAGCATACCATTGGG +
Preference number: 4 (lower is better)
Translates to: AAVFPLSAQNVWFPLPLSVRRVS*RQHTIG
Trigger: CCCAATGGTATGCTGTCTTCAAGAGACCCGTCTCAC...ACTCAGGGGGAGAGGAAACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR GCA 90 bp GGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAATCTGGTCAGCCATCTTaGCCACTCCTCCACTTCTCC +
Preference number: 4 (lower is better)
Translates to: GGGWKPRPEDLPGEKIWESGQPS*PLLHFS
Trigger: GGAGAAGTGGAGGAGTGGGCAAGATGGCTGACCAGA...TTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR GCA 90 bp GCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTTTCCTCTCCCCCTGAGTGCCACACACACTAGCTaGTTCTGGTCAGCCATCTTG +
Preference number: 4 (lower is better)
Translates to: AAVFPLSAQNVWFPLPLSATHTS*FWSAIL
Trigger: CAAGATGGCTGACCAGAAGCAGCTAGTGTGTGTGGC...ACTCAGGGGGAGAGGAAACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR GCA 90 bp GGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAATCCACCCCAGAGAGATaGAGGTCAGCAATCGCTCAG +
Preference number: 4 (lower is better)
Translates to: GGGWKPRPEDLPGEKIWESTPER*RSAIAQ
Trigger: CTGAGCGATTGCTGACCTGCATCTCTCTGGGGTGGA...TTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp GGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAAATGTTTCTGAACTCCTaGGGGTCTGTGCCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: GGGWKPRPEDLPGEKIWEMFLNS*GSVPGL
Trigger: GAGGCCTGGCACAGACCCCCAGGAGTTCAGAAACAT...TTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp GTGTCACCAGTGAAGGCTGTGAAACAGCAAAGACAGTGGCTTGTCCCTTCCTCTCCATGCTGGCCTGAGTaGCTGCTCTGCCAAGACTCC +
Preference number: 4 (lower is better)
Translates to: VSPVKAVKQQRQWLVPSSPCWPE*LLCQDS
Trigger: GGAGTCTTGGCAGAGCAGCCACTCAGGCCAGCATGG...AGAGGAAGGGACAAGCCACTGTCTTTGCTGTTTCACAGCCTTCACTGGTGACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp GGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAATGTGTTGTGCTAGGCTaGGGGTTCTCTTCCACCCTG +
Preference number: 4 (lower is better)
Translates to: GGGWKPRPEDLPGEKIWECVVLG*GFSSTL
Trigger: CAGGGTGGAAGAGAACCCCCAGCCTAGCACAACACA...TTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp GCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTTTCCTCTCCCCCTGAGTAGCAGCTGTAGGAAGTaGCTGGAGAGCCTAGTTGAG +
Preference number: 4 (lower is better)
Translates to: AAVFPLSAQNVWFPLPLSSSCRK*LESLVE
Trigger: CTCAACTAGGCTCTCCAGCCACTTCCTACAGCTGCT...ACTCAGGGGGAGAGGAAACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp GTGTCACCAGTGAAGGCTGTGAAACAGCAAAGACAGTGGCTTGTCCCTTCCTCTGATAGTTCTGGCTGGTaGTGGCTGGAAGCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: VSPVKAVKQQRQWLVPSSDSSGW*WLEAQA
Trigger: GGCCTGGGCTTCCAGCCACCACCAGCCAGAACTATC...AGAGGAAGGGACAAGCCACTGTCTTTGCTGTTTCACAGCCTTCACTGGTGACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp GGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAACATTTGTTTGACTCCTaGGGGCTCCACCCCAGAGAG +
Preference number: 4 (lower is better)
Translates to: GGGWKPRPEDLPGEKIWEHLFDS*GLHPRE
Trigger: CTCTCTGGGGTGGAGCCCCCAGGAGTCAAACAAATG...TTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR TCA 90 bp GTGTCACCAGTGAAGGCTGTGAAACAGCAAAGACAGTGGCTTGTCCCTTCCTCTGCTTGTCCCTTCCTCTaGGAGCTTTGTCCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: VSPVKAVKQQRQWLVPSSACPFL*ELCPRE
Trigger: CTCCCTGGGACAAAGCTCTCAGAGGAAGGGACAAGC...AGAGGAAGGGACAAGCCACTGTCTTTGCTGTTTCACAGCCTTCACTGGTGACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR TCA 90 bp GTGTCACCAGTGAAGGCTGTGAAACAGCAAAGACAGTGGCTTGTCCCTTCCTCTGGTTTCCTCTCCCCCTaGGTGCTGCCTGTAGTTCCT +
Preference number: 4 (lower is better)
Translates to: VSPVKAVKQQRQWLVPSSGFLSP*VLPVVP
Trigger: AGGAACTACAGGCAGCACTCAGGGGGAGAGGAAACC...AGAGGAAGGGACAAGCCACTGTCTTTGCTGTTTCACAGCCTTCACTGGTGACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp GCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTTTCCTCTCCCCCTGAGTTATCCTCAGATCATCTaGAGATCAGCTGGGACTGGC +
Preference number: 4 (lower is better)
Translates to: AAVFPLSAQNVWFPLPLSYPQII*RSAGTG
Trigger: GCCAGTCCCAGCTGATCTCCAGATGATCTGAGGATA...ACTCAGGGGGAGAGGAAACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp GCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTTTCCTCTCCCCCTGAGTGGTTCTCTTCCACCCTaGGTCAGCTCAGATTCTTCA +
Preference number: 4 (lower is better)
Translates to: AAVFPLSAQNVWFPLPLSGSLPP*VSSDSS
Trigger: TGAAGAATCTGAGCTGACCCAGGGTGGAAGAGAACC...ACTCAGGGGGAGAGGAAACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp GGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAACAAATCTTTGTCACCTaGAGAGCTTGGTGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: GGGWKPRPEDLPGEKIWEQIFVT*RAWWGW
Trigger: CCACCCCCACCAAGCTCTCCAGGTGACAAAGATTTG...TTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp GGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAAACAGCTGTGCTGTGTTaGGGGTCTACTTCAGTCCTC +
Preference number: 4 (lower is better)
Translates to: GGGWKPRPEDLPGEKIWETAVLC*GSTSVL
Trigger: GAGGACTGAAGTAGACCCCCAACACAGCACAGCTGT...TTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp TTGATAGTTCTGGCTGGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTACAGCTGTGCTGTGTTaGGGGTCTACTTCAGTCCTC +
Preference number: 4 (lower is better)
Translates to: LIVLAGGGWKPRPEDLPGTAVLC*GSTSVL
Trigger: GAGGACTGAAGTAGACCCCCAACACAGCACAGCTGT...ACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACCAGCCAGAACTATCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp CCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAATGGAAACCCACGAAACGATAGTTCTGGCTGGTaGTGGCTGGAAGCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: PGLKIFLVRRYGNGNPRNDSSGW*WLEAQA
Trigger: GGCCTGGGCTTCCAGCCACCACCAGCCAGAACTATC...GTTTCGTGGGTTTCCATTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp GGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAACATAGGGAGGAGTCCTaGAAGCTGGAGCATAGATGC +
Preference number: 4 (lower is better)
Translates to: GGGWKPRPEDLPGEKIWEHREES*KLEHRC
Trigger: GCATCTATGCTCCAGCTTCCAGGACTCCTCCCTATG...TTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR CAA 72 bp CTTGTGAGGTGGCATGGAAGTGGGGCCTGTGGGTTGTaGCTGTTAACACCCCTGGATTCAGCCTCTTTCCTA +
Preference number: 4 (lower is better)
Translates to: LVRWHGSGACGL*LLTPLDSASFL
Trigger: TAGGAAAGAGGCTGAATCCAGGGGTGTTAACAGCAACAACCCACAGGCCCCACTTCCATGCCACCTCACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR TCA 90 bp TATGTTTCCTCACATTTGCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTGACTCCATGCTGGCCTaGGTGGCTGCTCTGCCAAGA +
Preference number: 4 (lower is better)
Translates to: YVSSHLQLCSLSVLRTCGDSMLA*VAALPR
Trigger: TCTTGGCAGAGCAGCCACTCAGGCCAGCATGGAGTC...ACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGCAAATGTGAGGAAACATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR TCA 90 bp CCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAATGGAAACCCACGAAACGGAGGTCCTGCCCAGTaGAGAGGAATGGGATTGGAC +
Preference number: 4 (lower is better)
Translates to: PGLKIFLVRRYGNGNPRNGGPAQ*RGMGLD
Trigger: GTCCAATCCCATTCCTCTTCACTGGGCAGGACCTCC...GTTTCGTGGGTTTCCATTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR TCA 90 bp CCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAATGGAAACCCACGAAACGCTTGTCCCTTCCTCTaGGAGCTTTGTCCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: PGLKIFLVRRYGNGNPRNACPFL*ELCPRE
Trigger: CTCCCTGGGACAAAGCTCTCAGAGGAAGGGACAAGC...GTTTCGTGGGTTTCCATTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR TCA 90 bp GTGTCACCAGTGAAGGCTGTGAAACAGCAAAGACAGTGGCTTGTCCCTTCCTCTGGTCTGCTGTTAGCCTaGCGGGGATCCCTTTGTAGA +
Preference number: 4 (lower is better)
Translates to: VSPVKAVKQQRQWLVPSSGLLLA*RGSLCR
Trigger: TCTACAAAGGGATCCCCGTCAGGCTAACAGCAGACC...AGAGGAAGGGACAAGCCACTGTCTTTGCTGTTTCACAGCCTTCACTGGTGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR GCA 90 bp CCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAATGGAAACCCACGAAACTCCTGGGCTGCCTGCTaGAGCTCTGGGGAGATCTTT +
Preference number: 4 (lower is better)
Translates to: PGLKIFLVRRYGNGNPRNSWAAC*SSGEIF
Trigger: AAAGATCTCCCCAGAGCTGCAGCAGGCAGCCCAGGA...GTTTCGTGGGTTTCCATTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR GCA 90 bp GCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTTTCCTCTCCCCCTGAGTCTGCTTGCCACTCTGTaGCTTTTTAGTGGGGCATTT +
Preference number: 4 (lower is better)
Translates to: AAVFPLSAQNVWFPLPLSLLATL*LFSGAF
Trigger: AAATGCCCCACTAAAAAGGCACAGAGTGGCAAGCAG...ACTCAGGGGGAGAGGAAACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp TATGTTTCCTCACATTTGCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTCCATGCTGGCCTGAGTaGCTGCTCTGCCAAGACTCC +
Preference number: 4 (lower is better)
Translates to: YVSSHLQLCSLSVLRTCGPCWPE*LLCQDS
Trigger: GGAGTCTTGGCAGAGCAGCCACTCAGGCCAGCATGG...ACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGCAAATGTGAGGAAACATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp TTGATAGTTCTGGCTGGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTGGAGGTATGCAGTTTTaGTGGCCCAAAGCAGCTGTA +
Preference number: 4 (lower is better)
Translates to: LIVLAGGGWKPRPEDLPGGGMQF*WPKAAV
Trigger: TACAGCTGCTTTGGGCCACCAAAACTGCATACCTCC...ACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACCAGCCAGAACTATCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp TATGTTTCCTCACATTTGCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTCTGGCTGGTGGTGGCTaGAAGCCCAGGCCTGAAGAT +
Preference number: 4 (lower is better)
Translates to: YVSSHLQLCSLSVLRTCGLAGGG*KPRPED
Trigger: ATCTTCAGGCCTGGGCTTCCAGCCACCACCAGCCAG...ACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGCAAATGTGAGGAAACATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp GGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAATGCCTGCTGCAGCTCTaGGGAGATCTTTGTGTTTAC +
Preference number: 4 (lower is better)
Translates to: GGGWKPRPEDLPGEKIWECLLQL*GDLCVY
Trigger: GTAAACACAAAGATCTCCCCAGAGCTGCAGCAGGCA...TTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp GCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTTTCCTCTCCCCCTGAGTTCCAGTTGTTTTCTGTaGGTGATGAGGGCTGAGATC +
Preference number: 4 (lower is better)
Translates to: AAVFPLSAQNVWFPLPLSSSCFL*VMRAEI
Trigger: GATCTCAGCCCTCATCACCCACAGAAAACAACTGGA...ACTCAGGGGGAGAGGAAACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR CAA 72 bp AGCAAAGACAGTGGCTTGTCCCTTCCTCTGAGAGCTTaGTCCCAGGGAGGTATGCAGTTTTGGTGGCCCAAA +
Preference number: 4 (lower is better)
Translates to: SKDSGLSLPLRA*SQGGMQFWWPK
Trigger: TTTGGGCCACCAAAACTGCATACCTCCCTGGGACAAAGCTCTCAGAGGAAGGGACAAGCCACTGTCTTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR TCA 90 bp GGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAACCACAGAAGTGGAGTTaGAGCAAAGCACCAATTTGG +
Preference number: 4 (lower is better)
Translates to: GGGWKPRPEDLPGEKIWEPQKWS*SKAPIW
Trigger: CCAAATTGGTGCTTTGCTTCAACTCCACTTCTGTGG...TTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR TCA 90 bp TTGATAGTTCTGGCTGGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTCCACAGAAGTGGAGTTaGAGCAAAGCACCAATTTGG +
Preference number: 4 (lower is better)
Translates to: LIVLAGGGWKPRPEDLPGPQKWS*SKAPIW
Trigger: CCAAATTGGTGCTTTGCTTCAACTCCACTTCTGTGG...ACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACCAGCCAGAACTATCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR TCA 90 bp TTGATAGTTCTGGCTGGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTCAAGATGGGCATGTTTaGCCACAAAATTGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: LIVLAGGGWKPRPEDLPGQDGHV*PQNWLS
Trigger: GGACAGCCAATTTTGTGGTCAAACATGCCCATCTTG...ACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACCAGCCAGAACTATCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR TCA 90 bp GGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAATCAGCTGGGACTGGCTaGTGTAGAGTAGGCTTAAAT +
Preference number: 4 (lower is better)
Translates to: GGGWKPRPEDLPGEKIWESAGTG*CRVGLN
Trigger: ATTTAAGCCTACTCTACATCAGCCAGTCCCAGCTGA...TTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR TCA 90 bp TTGATAGTTCTGGCTGGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTTTCTGTTCCTTTCCATaGCAGCCACACACACTAGCT +
Preference number: 4 (lower is better)
Translates to: LIVLAGGGWKPRPEDLPGFCSFP*QPHTLA
Trigger: AGCTAGTGTGTGTGGCTGTCATGGAAAGGAACAGAA...ACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACCAGCCAGAACTATCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR TCA 90 bp TTGATAGTTCTGGCTGGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTTGTGTGTCTTACATGTaGGACGGGTCTCTTGAAGAC +
Preference number: 4 (lower is better)
Translates to: LIVLAGGGWKPRPEDLPGCVSYM*DGSLED
Trigger: GTCTTCAAGAGACCCGTCTCACATGTAAGACACACA...ACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACCAGCCAGAACTATCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR GCA 90 bp CCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAATGGAAACCCACGAAACTCTGGTCAGCCATCTTaGCCACTCCTCCACTTCTCC +
Preference number: 4 (lower is better)
Translates to: PGLKIFLVRRYGNGNPRNSGQPS*PLLHFS
Trigger: GGAGAAGTGGAGGAGTGGGCAAGATGGCTGACCAGA...GTTTCGTGGGTTTCCATTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR GCA 90 bp GGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAATCTAACCTCCAACTTTaGTGGGGCTGCAGCTACTTT +
Preference number: 4 (lower is better)
Translates to: GGGWKPRPEDLPGEKIWESNLQL*WGCSYF
Trigger: AAAGTAGCTGCAGCCCCAGCAAAGTTGGAGGTTAGA...TTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR GCA 90 bp GTGTCACCAGTGAAGGCTGTGAAACAGCAAAGACAGTGGCTTGTCCCTTCCTCTAGGGCTGCTGTTTTATaGTTGGGGGCTGCTCCAGTA +
Preference number: 4 (lower is better)
Translates to: VSPVKAVKQQRQWLVPSSRAAVL*LGAAPV
Trigger: TACTGGAGCAGCCCCCAAGCATAAAACAGCAGCCCT...AGAGGAAGGGACAAGCCACTGTCTTTGCTGTTTCACAGCCTTCACTGGTGACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR GCA 90 bp GTGTCACCAGTGAAGGCTGTGAAACAGCAAAGACAGTGGCTTGTCCCTTCCTCTCAAGGGCAGTTCCACTaGAGAGGCAGTGGCATAGAA +
Preference number: 4 (lower is better)
Translates to: VSPVKAVKQQRQWLVPSSQGQFH*RGSGIE
Trigger: TTCTATGCCACTGCCTCTGCAGTGGAACTGCCCTTG...AGAGGAAGGGACAAGCCACTGTCTTTGCTGTTTCACAGCCTTCACTGGTGACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR GCA 90 bp CCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAATGGAAACCCACGAAACTCCACCCCAGAGAGATaGAGGTCAGCAATCGCTCAG +
Preference number: 4 (lower is better)
Translates to: PGLKIFLVRRYGNGNPRNSTPER*RSAIAQ
Trigger: CTGAGCGATTGCTGACCTGCATCTCTCTGGGGTGGA...GTTTCGTGGGTTTCCATTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR GCA 90 bp TTGATAGTTCTGGCTGGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTCTGCTTGCCACTCTGTaGCTTTTTAGTGGGGCATTT +
Preference number: 4 (lower is better)
Translates to: LIVLAGGGWKPRPEDLPGLLATL*LFSGAF
Trigger: AAATGCCCCACTAAAAAGGCACAGAGTGGCAAGCAG...ACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACCAGCCAGAACTATCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp GCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTTTCCTCTCCCCCTGAGTCCTGGTGAGAAGATATaGGAATGGAAACCCACGAAA +
Preference number: 4 (lower is better)
Translates to: AAVFPLSAQNVWFPLPLSPGEKI*EWKPTK
Trigger: TTTCGTGGGTTTCCATTCCCATATCTTCTCACCAGG...ACTCAGGGGGAGAGGAAACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp GGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAACCACTGCAGAGGCAGTaGCATAGAAACTTTCTGTTG +
Preference number: 4 (lower is better)
Translates to: GGGWKPRPEDLPGEKIWEPLQRQ*HRNFLL
Trigger: CAACAGAAAGTTTCTATGCCACTGCCTCTGCAGTGG...TTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp TTCTCCCTCTGTGAGTGCCATCTCAGGGATAATTCAAATCTTTGTCACCTGGAGGGTGTGTGGGACCCGTaGGAGACAGACCAGCCTCTT +
Preference number: 4 (lower is better)
Translates to: FSLCECHLRDNSNLCHLEGVWDP*ETDQPL
Trigger: AAGAGGCTGGTCTGTCTCCCACGGGTCCCACACACC...CTCCAGGTGACAAAGATTTGAATTATCCCTGAGATGGCACTCACAGAGGGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR TCA 90 bp CCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAATGGAAACCCACGAAACGAGAAGCACAGGTGTTaGATGCCTTGGACCTGCCTT +
Preference number: 4 (lower is better)
Translates to: PGLKIFLVRRYGNGNPRNEKHRC*MPWTCL
Trigger: AAGGCAGGTCCAAGGCATTCAACACCTGTGCTTCTC...GTTTCGTGGGTTTCCATTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR TCA 90 bp CCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAATGGAAACCCACGAAACCTAAGTCTTGTCCTGTaGCCTTTACCCAGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: PGLKIFLVRRYGNGNPRNLSLVL*PLPRSS
Trigger: GGAGGACCTGGGTAAAGGTCACAGGACAAGACTTAG...GTTTCGTGGGTTTCCATTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR TCA 90 bp GGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAATACCCAAGCAGGTTTTaGTCTGAGGAAATTCCTCTG +
Preference number: 4 (lower is better)
Translates to: GGGWKPRPEDLPGEKIWEYPSRF*SEEIPL
Trigger: CAGAGGAATTTCCTCAGATCAAAACCTGCTTGGGTA...TTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641850.1
CDS-3UTR TCA 90 bp GCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTTTCCTCTCCCCCTGAGTCTGGGGTCCCTATTCTaGGTTTTGAATAAGTATCAG +
Preference number: 4 (lower is better)
Translates to: AAVFPLSAQNVWFPLPLSLGSLF*VLNKYQ
Trigger: CTGATACTTATTCAAAACTCAGAATAGGGACCCCAG...ACTCAGGGGGAGAGGAAACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR TCA 90 bp CCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAATGGAAACCCACGAAACGTGAGACGGGTCTCTTaGAGACAGCATACCATTGGG +
Preference number: 4 (lower is better)
Translates to: PGLKIFLVRRYGNGNPRNVRRVS*RQHTIG
Trigger: CCCAATGGTATGCTGTCTTCAAGAGACCCGTCTCAC...GTTTCGTGGGTTTCCATTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR TCA 90 bp GCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTTTCCTCTCCCCCTGAGTGTTCAGGAACTCCTCTaGTGTATCCTATTGGTTTTG +
Preference number: 4 (lower is better)
Translates to: AAVFPLSAQNVWFPLPLSVQELL*CILLVL
Trigger: CAAAACCAATAGGATACATCAGAGGAGTTCCTGAAC...ACTCAGGGGGAGAGGAAACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR GCA 90 bp GTGTCACCAGTGAAGGCTGTGAAACAGCAAAGACAGTGGCTTGTCCCTTCCTCTAGCACAGGTGTTGAATaGCTTGGACCTGCCTTTAGC +
Preference number: 4 (lower is better)
Translates to: VSPVKAVKQQRQWLVPSSSTGVE*LGPAFS
Trigger: GCTAAAGGCAGGTCCAAGGCATTCAACACCTGTGCT...AGAGGAAGGGACAAGCCACTGTCTTTGCTGTTTCACAGCCTTCACTGGTGACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR GCA 90 bp GGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAAAAGCAACACTTCTTGTaGTTGGAGTGGGTATCTCTG +
Preference number: 4 (lower is better)
Translates to: GGGWKPRPEDLPGEKIWEKQHFL*LEWVSL
Trigger: CAGAGATACCCACTCCAAGCACAAGAAGTGTTGCTT...TTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641850.1
CDS-3UTR GCA 90 bp AAAATAATGAACCTCCAGGACCTAAAGATCCTGATGTCTGTGGCATTGAGTCATCTTGGTGGGGGTGGCTaGAGGCCCCAGTTGGGAGGT +
Preference number: 4 (lower is better)
Translates to: KIMNLQDLKILMSVALSHLGGGG*RPQLGG
Trigger: ACCTCCCAACTGGGGCCTGCAGCCACCCCCACCAAG...ATGACTCAATGCCACAGACATCAGGATCTTTAGGTCCTGGAGGTTCATTATTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp GCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTTTCCTCTCCCCCTGAGTATGGAATTTTTCAGGTaGGCGTATCACACTCCAAGA +
Preference number: 4 (lower is better)
Translates to: AAVFPLSAQNVWFPLPLSMEFFR*AYHTPR
Trigger: TCTTGGAGTGTGATACGCCCACCTGAAAAATTCCAT...ACTCAGGGGGAGAGGAAACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp TTGATAGTTCTGGCTGGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTTTTTTCCCTTTCCAATaGCAGAACCCCTCTGTCTGT +
Preference number: 4 (lower is better)
Translates to: LIVLAGGGWKPRPEDLPGFFPFQ*QNPSVC
Trigger: ACAGACAGAGGGGTTCTGCCATTGGAAAGGGAAAAA...ACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACCAGCCAGAACTATCAA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp TATGTTTCCTCACATTTGCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTCAGCATCACACACCTTaGGGGTGGCAGAGCCTGAAT +
Preference number: 4 (lower is better)
Translates to: YVSSHLQLCSLSVLRTCGQHHTP*GWQSLN
Trigger: ATTCAGGCTCTGCCACCCCCAAGGTGTGTGATGCTG...ACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGCAAATGTGAGGAAACATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp TTTATTATGCTGTATCAGCATATATGGGAGATGATGTTTCTGAACTCCTGGGGGACCTGGAGAGCTTGGTaGGGGTGGCTGCAGGCCCCA +
Preference number: 4 (lower is better)
Translates to: FIMLYQHIWEMMFLNSWGTWRAW*GWLQAP
Trigger: TGGGGCCTGCAGCCACCCCCACCAAGCTCTCCAGGT...CCCCCAGGAGTTCAGAAACATCATCTCCCATATATGCTGATACAGCATAATAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp GCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTTTCCTCTCCCCCTGAGTGAGAAGATATGGGAATaGAAACCCACGAAACACTCT +
Preference number: 4 (lower is better)
Translates to: AAVFPLSAQNVWFPLPLSEKIWE*KPTKHS
Trigger: AGAGTGTTTCGTGGGTTTCCATTCCCATATCTTCTC...ACTCAGGGGGAGAGGAAACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp TTGATAGTTCTGGCTGGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTTGCTCATTCATTAGTTaGAGCGTGTCAAGGGCAGTT +
Preference number: 4 (lower is better)
Translates to: LIVLAGGGWKPRPEDLPGCSFIS*SVSRAV
Trigger: AACTGCCCTTGACACGCTCCAACTAATGAATGAGCA...ACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACCAGCCAGAACTATCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR TCA 90 bp TATGTTTCCTCACATTTGCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTCTAAGTCTTGTCCTGTaGCCTTTACCCAGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: YVSSHLQLCSLSVLRTCGLSLVL*PLPRSS
Trigger: GGAGGACCTGGGTAAAGGTCACAGGACAAGACTTAG...ACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGCAAATGTGAGGAAACATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR TCA 90 bp CCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAATGGAAACCCACGAAACTGGAGTGGGTATCTCTaGTATCTGTGTTGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: PGLKIFLVRRYGNGNPRNWSGYL*YLCCPG
Trigger: TCCTGGGCAACACAGATATCAGAGATACCCACTCCA...GTTTCGTGGGTTTCCATTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641850.1
CDS-3UTR TCA 90 bp TTTTCCAAATTTGTCCCTGGACCTTCCCTCAAGATGGGCTTAGCTAGACTACATGGGGGTGGCAGAGCCTaGATTTTACGCCAGGCAGTT +
Preference number: 4 (lower is better)
Translates to: FSKFVPGPSLKMGLARLHGGGRA*ILRQAV
Trigger: AACTGCCTGGCGTAAAATTCAGGCTCTGCCACCCCC...ATGTAGTCTAGCTAAGCCCATCTTGAGGGAAGGTCCAGGGACAAATTTGGAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR TCA 90 bp TTTTCCAAATTTGTCCCTGGACCTTCCCTCAAGATGGGCTTAGCTAGACTACATGGTTTCCTCTCCCCCTaGGTGCTGCCTGTAGTTCCT +
Preference number: 4 (lower is better)
Translates to: FSKFVPGPSLKMGLARLHGFLSP*VLPVVP
Trigger: AGGAACTACAGGCAGCACTCAGGGGGAGAGGAAACC...ATGTAGTCTAGCTAAGCCCATCTTGAGGGAAGGTCCAGGGACAAATTTGGAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR TCA 90 bp GTGTCACCAGTGAAGGCTGTGAAACAGCAAAGACAGTGGCTTGTCCCTTCCTCTTGTGTGTCTTACATGTaGGACGGGTCTCTTGAAGAC +
Preference number: 4 (lower is better)
Translates to: VSPVKAVKQQRQWLVPSSCVSYM*DGSLED
Trigger: GTCTTCAAGAGACCCGTCTCACATGTAAGACACACA...AGAGGAAGGGACAAGCCACTGTCTTTGCTGTTTCACAGCCTTCACTGGTGACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR TCA 90 bp TTGATAGTTCTGGCTGGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTGTTCAGGAACTCCTCTaGTGTATCCTATTGGTTTTG +
Preference number: 4 (lower is better)
Translates to: LIVLAGGGWKPRPEDLPGVQELL*CILLVL
Trigger: CAAAACCAATAGGATACATCAGAGGAGTTCCTGAAC...ACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACCAGCCAGAACTATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR GCA 90 bp TTGATAGTTCTGGCTGGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTTTCTCTGAACATGACTaGAGGTTAGCTTGTCTAGGT +
Preference number: 4 (lower is better)
Translates to: LIVLAGGGWKPRPEDLPGFSEHD*RLACLG
Trigger: ACCTAGACAAGCTAACCTGCAGTCATGTTCAGAGAA...ACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACCAGCCAGAACTATCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR GCA 90 bp CCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAATGGAAACCCACGAAACTGTGTTCCCTCTCAGTaGTCAGAACGTGTGGTTTCC +
Preference number: 4 (lower is better)
Translates to: PGLKIFLVRRYGNGNPRNCVPSQ*SERVVS
Trigger: GGAAACCACACGTTCTGAGCACTGAGAGGGAACACA...GTTTCGTGGGTTTCCATTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR GCA 90 bp GTGTCACCAGTGAAGGCTGTGAAACAGCAAAGACAGTGGCTTGTCCCTTCCTCTTCTTCACTGTGTTGCTaGAGCTCCTTAACTGGACTG +
Preference number: 4 (lower is better)
Translates to: VSPVKAVKQQRQWLVPSSSSLCC*SSLTGL
Trigger: CAGTCCAGTTAAGGAGCTGCAGCAACACAGTGAAGA...AGAGGAAGGGACAAGCCACTGTCTTTGCTGTTTCACAGCCTTCACTGGTGACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp GGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAAATGGAATTTTTCAGGTaGGCGTATCACACTCCAAGA +
Preference number: 4 (lower is better)
Translates to: GGGWKPRPEDLPGEKIWEMEFFR*AYHTPR
Trigger: TCTTGGAGTGTGATACGCCCACCTGAAAAATTCCAT...TTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp GGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAATTCTTATGCTACAGCTaGTGTAGGCAAGGAAATTGC +
Preference number: 4 (lower is better)
Translates to: GGGWKPRPEDLPGEKIWEFLCYS*CRQGNC
Trigger: GCAATTTCCTTGCCTACACCAGCTGTAGCATAAGAA...TTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp CCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAATGGAAACCCACGAAACTCTTATCTTGTGAGGTaGCATGGAAGTGGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: PGLKIFLVRRYGNGNPRNSYLVR*HGSGAC
Trigger: ACAGGCCCCACTTCCATGCCACCTCACAAGATAAGA...GTTTCGTGGGTTTCCATTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp TTCTCCCTCTGTGAGTGCCATCTCAGGGATAATTCAAATCTTTGTCACCTGGAGTGTGTTGTGCTAGGCTaGGGGTTCTCTTCCACCCTG +
Preference number: 4 (lower is better)
Translates to: FSLCECHLRDNSNLCHLECVVLG*GFSSTL
Trigger: CAGGGTGGAAGAGAACCCCCAGCCTAGCACAACACA...CTCCAGGTGACAAAGATTTGAATTATCCCTGAGATGGCACTCACAGAGGGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp TTGATAGTTCTGGCTGGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAATaGAAACCCACGAAACACTCT +
Preference number: 4 (lower is better)
Translates to: LIVLAGGGWKPRPEDLPGEKIWE*KPTKHS
Trigger: AGAGTGTTTCGTGGGTTTCCATTCCCATATCTTCTC...ACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACCAGCCAGAACTATCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp TTTTCCAAATTTGTCCCTGGACCTTCCCTCAAGATGGGCTTAGCTAGACTACATCTGATTCAGCACTCCTaGGCTGCCTGCTGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: FSKFVPGPSLKMGLARLHLIQHS*AACCSS
Trigger: AGAGCTGCAGCAGGCAGCCCAGGAGTGCTGAATCAG...ATGTAGTCTAGCTAAGCCCATCTTGAGGGAAGGTCCAGGGACAAATTTGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp CCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAATGGAAACCCACGAAACTCCTCCCCCAGTCATTaGCTCAGTGCTCCTGAAATT +
Preference number: 4 (lower is better)
Translates to: PGLKIFLVRRYGNGNPRNSSPSH*LSAPEI
Trigger: AATTTCAGGAGCACTGAGCCAATGACTGGGGGAGGA...GTTTCGTGGGTTTCCATTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641998.1
3UTR CAA 72 bp TGTTCTGTTGTGTGGCTCCCCTATGTTTCCTCACATTaGCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGT +
Preference number: 4 (lower is better)
Translates to: CSVVWLPYVSSH*QLCSLSVLRTC
Trigger: ACACGTTCTGAGCACTGAGAGGGAACACAGCTGCAAATGTGAGGAAACATAGGGGAGCCACACAACAGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR TCA 90 bp TTCTCCCTCTGTGAGTGCCATCTCAGGGATAATTCAAATCTTTGTCACCTGGAGAGAGGGTGGGTGACATaGTGGATGAATAGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: FSLCECHLRDNSNLCHLERGWVT*WMNRAG
Trigger: CCCTGCTCTATTCATCCATCATGTCACCCACCCTCT...CTCCAGGTGACAAAGATTTGAATTATCCCTGAGATGGCACTCACAGAGGGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR TCA 90 bp TTCTCCCTCTGTGAGTGCCATCTCAGGGATAATTCAAATCTTTGTCACCTGGAGGAGAAGCACAGGTGTTaGATGCCTTGGACCTGCCTT +
Preference number: 4 (lower is better)
Translates to: FSLCECHLRDNSNLCHLEEKHRC*MPWTCL
Trigger: AAGGCAGGTCCAAGGCATTCAACACCTGTGCTTCTC...CTCCAGGTGACAAAGATTTGAATTATCCCTGAGATGGCACTCACAGAGGGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR TCA 90 bp CCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAATGGAAACCCACGAAACCAAGATGGGCATGTTTaGCCACAAAATTGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: PGLKIFLVRRYGNGNPRNQDGHV*PQNWLS
Trigger: GGACAGCCAATTTTGTGGTCAAACATGCCCATCTTG...GTTTCGTGGGTTTCCATTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR TCA 90 bp GGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAAGAATTACATGGATATTaGGACGGTACAGAATCCACT +
Preference number: 4 (lower is better)
Translates to: GGGWKPRPEDLPGEKIWEELHGY*DGTEST
Trigger: AGTGGATTCTGTACCGTCTCAATATCCATGTAATTC...TTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR TCA 90 bp GCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTTTCCTCTCCCCCTGAGTTGCAAAATCCAGTGCTaGCTGCAACATTCATTTATT +
Preference number: 4 (lower is better)
Translates to: AAVFPLSAQNVWFPLPLSCKIQC*LQHSFI
Trigger: AATAAATGAATGTTGCAGTCAGCACTGGATTTTGCA...ACTCAGGGGGAGAGGAAACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR TCA 90 bp TATGTTTCCTCACATTTGCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTTCTGAACAGCAAAGATaGCAGCCCAGCTCTTCCCTT +
Preference number: 4 (lower is better)
Translates to: YVSSHLQLCSLSVLRTCGSEQQR*QPSSSL
Trigger: AAGGGAAGAGCTGGGCTGTCATCTTTGCTGTTCAGA...ACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGCAAATGTGAGGAAACATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR GCA 90 bp CCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAATGGAAACCCACGAAACAAAGATTGTGTGGCTTaGCCAGCATCACACACCTTG +
Preference number: 4 (lower is better)
Translates to: PGLKIFLVRRYGNGNPRNKDCVA*PASHTL
Trigger: CAAGGTGTGTGATGCTGGGCAAGCCACACAATCTTT...GTTTCGTGGGTTTCCATTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR GCA 90 bp TTCTCCCTCTGTGAGTGCCATCTCAGGGATAATTCAAATCTTTGTCACCTGGAGGCCACACACACTAGCTaGTTCTGGTCAGCCATCTTG +
Preference number: 4 (lower is better)
Translates to: FSLCECHLRDNSNLCHLEATHTS*FWSAIL
Trigger: CAAGATGGCTGACCAGAAGCAGCTAGTGTGTGTGGC...CTCCAGGTGACAAAGATTTGAATTATCCCTGAGATGGCACTCACAGAGGGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR GCA 90 bp GCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTTTCCTCTCCCCCTGAGTAAGTCCCTCAACATTTaGTTATCTGAGAAGGATTGT +
Preference number: 4 (lower is better)
Translates to: AAVFPLSAQNVWFPLPLSKSLNI*LSEKDC
Trigger: ACAATCCTTCTCAGATAAGCAAATGTTGAGGGACTT...ACTCAGGGGGAGAGGAAACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp GGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAAATGGGTGTATGGAGGTaGGAATCCATCCTTATTAAA +
Preference number: 4 (lower is better)
Translates to: GGGWKPRPEDLPGEKIWEMGVWR*ESILIK
Trigger: TTTAATAAGGATGGATTCCCACCTCCATACACCCAT...TTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp TATGTTTCCTCACATTTGCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTTGGGGTGGAGAAAACTaGGAAACATACCCAAGCAGG +
Preference number: 4 (lower is better)
Translates to: YVSSHLQLCSLSVLRTCGWGGEN*ETYPSR
Trigger: CCTGCTTGGGTATGTTTCCCAGTTTTCTCCACCCCA...ACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGCAAATGTGAGGAAACATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641850.1
CDS-3UTR CCA 90 bp TTTTCCAAATTTGTCCCTGGACCTTCCCTCAAGATGGGCTTAGCTAGACTACATATGTTTCTGAACTCCTaGGGGTCTGTGCCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: FSKFVPGPSLKMGLARLHMFLNS*GSVPGL
Trigger: GAGGCCTGGCACAGACCCCCAGGAGTTCAGAAACAT...ATGTAGTCTAGCTAAGCCCATCTTGAGGGAAGGTCCAGGGACAAATTTGGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp TTCTCCCTCTGTGAGTGCCATCTCAGGGATAATTCAAATCTTTGTCACCTGGAGCAAATCTTTGTCACCTaGAGAGCTTGGTGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: FSLCECHLRDNSNLCHLEQIFVT*RAWWGW
Trigger: CCACCCCCACCAAGCTCTCCAGGTGACAAAGATTTG...CTCCAGGTGACAAAGATTTGAATTATCCCTGAGATGGCACTCACAGAGGGAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp CCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAATGGAAACCCACGAAACAAACAGCAAAGACAGTaGCTTGTCCCTTCCTCTGAG +
Preference number: 4 (lower is better)
Translates to: PGLKIFLVRRYGNGNPRNKQQRQ*LVPSSE
Trigger: CTCAGAGGAAGGGACAAGCCACTGTCTTTGCTGTTT...GTTTCGTGGGTTTCCATTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp TTTATTATGCTGTATCAGCATATATGGGAGATGATGTTTCTGAACTCCTGGGGGCTGGCTGGTGGTGGCTaGAAGCCCAGGCCTGAAGAT +
Preference number: 4 (lower is better)
Translates to: FIMLYQHIWEMMFLNSWGLAGGG*KPRPED
Trigger: ATCTTCAGGCCTGGGCTTCCAGCCACCACCAGCCAG...CCCCCAGGAGTTCAGAAACATCATCTCCCATATATGCTGATACAGCATAATAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp GGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAAGTAACAAATCAGCCATaGAAGTTTCTCCTTCCCTTT +
Preference number: 4 (lower is better)
Translates to: GGGWKPRPEDLPGEKIWEVTNQP*KFLLPF
Trigger: AAAGGGAAGGAGAAACTTCCATGGCTGATTTGTTAC...TTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR CAA 72 bp TTCCACCCAGTGAGGAGGAACAGGATTAGGAACCACTaGAAAAAGCAGTCTGGCCACGTTTTGGTAGAACAG +
Preference number: 4 (lower is better)
Translates to: FHPVRRNRIRNH*KKQSGHVLVEQ
Trigger: CTGTTCTACCAAAACGTGGCCAGACTGCTTTTTCAAGTGGTTCCTAATCCTGTTCCTCCTCACTGGGTGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR TCA 90 bp TTCTCCCTCTGTGAGTGCCATCTCAGGGATAATTCAAATCTTTGTCACCTGGAGAAGCCATGGCTGTCATaGGACAAGACTCACTCAGTC +
Preference number: 4 (lower is better)
Translates to: FSLCECHLRDNSNLCHLEKPWLS*DKTHSV
Trigger: GACTGAGTGAGTCTTGTCTCATGACAGCCATGGCTT...CTCCAGGTGACAAAGATTTGAATTATCCCTGAGATGGCACTCACAGAGGGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR TCA 90 bp GGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAACTTTTTACAGAAGGTTaGGTAAGGAGTAAGAGAATC +
Preference number: 4 (lower is better)
Translates to: GGGWKPRPEDLPGEKIWELFTEG*VRSKRI
Trigger: GATTCTCTTACTCCTTACTCAACCTTCTGTAAAAAG...TTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR TCA 90 bp AAAATAATGAACCTCCAGGACCTAAAGATCCTGATGTCTGTGGCATTGAGTCATGCTGCCTGTAGTTCCTaGTTCAGCACTCCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: KIMNLQDLKILMSVALSHAACSS*FSTPGL
Trigger: CAGCCCAGGAGTGCTGAATCAGGAACTACAGGCAGC...ATGACTCAATGCCACAGACATCAGGATCTTTAGGTCCTGGAGGTTCATTATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR TCA 90 bp GGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAACATTTGGAGGACATATaGTATTTTGGCCATTTGAGT +
Preference number: 4 (lower is better)
Translates to: GGGWKPRPEDLPGEKIWEHLEDI*YFGHLS
Trigger: ACTCAAATGGCCAAAATATCATATGTCCTCCAAATG...TTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR GCA 90 bp TTCTCCCTCTGTGAGTGCCATCTCAGGGATAATTCAAATCTTTGTCACCTGGAGAGCACAGGTGTTGAATaGCTTGGACCTGCCTTTAGC +
Preference number: 4 (lower is better)
Translates to: FSLCECHLRDNSNLCHLESTGVE*LGPAFS
Trigger: GCTAAAGGCAGGTCCAAGGCATTCAACACCTGTGCT...CTCCAGGTGACAAAGATTTGAATTATCCCTGAGATGGCACTCACAGAGGGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR GCA 90 bp CCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAATGGAAACCCACGAAACAGGACATGGTCAGTTTaGAAAGTTGTGCAGGGTACA +
Preference number: 4 (lower is better)
Translates to: PGLKIFLVRRYGNGNPRNRTWSV*KVVQGT
Trigger: TGTACCCTGCACAACTTTGCAAACTGACCATGTCCT...GTTTCGTGGGTTTCCATTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641850.1
CDS-3UTR GCA 90 bp TATGTTTCCTCACATTTGCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTTCTAACCTCCAACTTTaGTGGGGCTGCAGCTACTTT +
Preference number: 4 (lower is better)
Translates to: YVSSHLQLCSLSVLRTCGSNLQL*WGCSYF
Trigger: AAAGTAGCTGCAGCCCCAGCAAAGTTGGAGGTTAGA...ACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGCAAATGTGAGGAAACATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR GCA 90 bp CCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAATGGAAACCCACGAAACATGTTTCCTCACATTTaGAGCTGTGTTCCCTCTCAG +
Preference number: 4 (lower is better)
Translates to: PGLKIFLVRRYGNGNPRNMFPHI*SCVPSQ
Trigger: CTGAGAGGGAACACAGCTGCAAATGTGAGGAAACAT...GTTTCGTGGGTTTCCATTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR GCA 90 bp TTGATAGTTCTGGCTGGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTAAGTCCCTCAACATTTaGTTATCTGAGAAGGATTGT +
Preference number: 4 (lower is better)
Translates to: LIVLAGGGWKPRPEDLPGKSLNI*LSEKDC
Trigger: ACAATCCTTCTCAGATAAGCAAATGTTGAGGGACTT...ACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACCAGCCAGAACTATCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR GCA 90 bp TATGTTTCCTCACATTTGCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTTCTTCACTGTGTTGCTaGAGCTCCTTAACTGGACTG +
Preference number: 4 (lower is better)
Translates to: YVSSHLQLCSLSVLRTCGSSLCC*SSLTGL
Trigger: CAGTCCAGTTAAGGAGCTGCAGCAACACAGTGAAGA...ACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGCAAATGTGAGGAAACATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp TTCTCCCTCTGTGAGTGCCATCTCAGGGATAATTCAAATCTTTGTCACCTGGAGGTTCCTGTAAGAGGTTaGAGAGCATCTTGGGGACTG +
Preference number: 4 (lower is better)
Translates to: FSLCECHLRDNSNLCHLEVPVRG*RASWGL
Trigger: CAGTCCCCAAGATGCTCTCCAACCTCTTACAGGAAC...CTCCAGGTGACAAAGATTTGAATTATCCCTGAGATGGCACTCACAGAGGGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp GGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAACTGTATCAGCATATATaGGAGATGATGTTTCTGAAC +
Preference number: 4 (lower is better)
Translates to: GGGWKPRPEDLPGEKIWELYQHI*EMMFLN
Trigger: GTTCAGAAACATCATCTCCCATATATGCTGATACAG...TTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp TTTTCCAAATTTGTCCCTGGACCTTCCCTCAAGATGGGCTTAGCTAGACTACATAAAGCCCTGGTGGAGTaGGTTCACAAGGAGATCTCC +
Preference number: 4 (lower is better)
Translates to: FSKFVPGPSLKMGLARLHKALVE*VHKEIS
Trigger: GGAGATCTCCTTGTGAACCCACTCCACCAGGGCTTT...ATGTAGTCTAGCTAAGCCCATCTTGAGGGAAGGTCCAGGGACAAATTTGGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp TATGTTTCCTCACATTTGCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTAAACAGCAAAGACAGTaGCTTGTCCCTTCCTCTGAG +
Preference number: 4 (lower is better)
Translates to: YVSSHLQLCSLSVLRTCGKQQRQ*LVPSSE
Trigger: CTCAGAGGAAGGGACAAGCCACTGTCTTTGCTGTTT...ACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGCAAATGTGAGGAAACATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp TATGTTTCCTCACATTTGCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTCCACTGCAGAGGCAGTaGCATAGAAACTTTCTGTTG +
Preference number: 4 (lower is better)
Translates to: YVSSHLQLCSLSVLRTCGPLQRQ*HRNFLL
Trigger: CAACAGAAAGTTTCTATGCCACTGCCTCTGCAGTGG...ACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGCAAATGTGAGGAAACATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp AAAATAATGAACCTCCAGGACCTAAAGATCCTGATGTCTGTGGCATTGAGTCATCTGATTCAGCACTCCTaGGCTGCCTGCTGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: KIMNLQDLKILMSVALSHLIQHS*AACCSS
Trigger: AGAGCTGCAGCAGGCAGCCCAGGAGTGCTGAATCAG...ATGACTCAATGCCACAGACATCAGGATCTTTAGGTCCTGGAGGTTCATTATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp CCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAATGGAAACCCACGAAACTCTTGTTCTGTTGTGTaGCTCCCCTATGTTTCCTCA +
Preference number: 4 (lower is better)
Translates to: PGLKIFLVRRYGNGNPRNSCSVV*LPYVSS
Trigger: TGAGGAAACATAGGGGAGCCACACAACAGAACAAGA...GTTTCGTGGGTTTCCATTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp TTGATAGTTCTGGCTGGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTGGACATATGATATTTTaGCCATTTGAGTTACCAGAG +
Preference number: 4 (lower is better)
Translates to: LIVLAGGGWKPRPEDLPGGHMIF*PFELPE
Trigger: CTCTGGTAACTCAAATGGCCAAAATATCATATGTCC...ACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACCAGCCAGAACTATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp GGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAAGGACATATGATATTTTaGCCATTTGAGTTACCAGAG +
Preference number: 4 (lower is better)
Translates to: GGGWKPRPEDLPGEKIWEGHMIF*PFELPE
Trigger: CTCTGGTAACTCAAATGGCCAAAATATCATATGTCC...TTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR TCA 90 bp TTCTCCCTCTGTGAGTGCCATCTCAGGGATAATTCAAATCTTTGTCACCTGGAGGATCCTGGGAAAATCTaGGAATCCCAGCAGGATGAA +
Preference number: 4 (lower is better)
Translates to: FSLCECHLRDNSNLCHLEDPGKI*ESQQDE
Trigger: TTCATCCTGCTGGGATTCTCAGATTTTCCCAGGATC...CTCCAGGTGACAAAGATTTGAATTATCCCTGAGATGGCACTCACAGAGGGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR TCA 90 bp TTCTCCCTCTGTGAGTGCCATCTCAGGGATAATTCAAATCTTTGTCACCTGGAGGGACCTGCCTTTAGCTaGAGTGATCTTCATGATGGA +
Preference number: 4 (lower is better)
Translates to: FSLCECHLRDNSNLCHLEGPAFS*SDLHDG
Trigger: TCCATCATGAAGATCACTTCAGCTAAAGGCAGGTCC...CTCCAGGTGACAAAGATTTGAATTATCCCTGAGATGGCACTCACAGAGGGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR TCA 90 bp CCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAATGGAAACCCACGAAACGAAACAGCTGTTAGATaGGAAGCACAGGTGTTGAAT +
Preference number: 4 (lower is better)
Translates to: PGLKIFLVRRYGNGNPRNETAVR*EAQVLN
Trigger: ATTCAACACCTGTGCTTCTCATCTAACAGCTGTTTC...GTTTCGTGGGTTTCCATTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR TCA 90 bp TTCTCCCTCTGTGAGTGCCATCTCAGGGATAATTCAAATCTTTGTCACCTGGAGTCAGCTGGGACTGGCTaGTGTAGAGTAGGCTTAAAT +
Preference number: 4 (lower is better)
Translates to: FSLCECHLRDNSNLCHLESAGTG*CRVGLN
Trigger: ATTTAAGCCTACTCTACATCAGCCAGTCCCAGCTGA...CTCCAGGTGACAAAGATTTGAATTATCCCTGAGATGGCACTCACAGAGGGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR TCA 90 bp TTCTCCCTCTGTGAGTGCCATCTCAGGGATAATTCAAATCTTTGTCACCTGGAGGGAGATCTCCTGACTTaGGGGTTGCAAAGACCTAAT +
Preference number: 4 (lower is better)
Translates to: FSLCECHLRDNSNLCHLEGDLLT*GLQRPN
Trigger: ATTAGGTCTTTGCAACCCTCAAGTCAGGAGATCTCC...CTCCAGGTGACAAAGATTTGAATTATCCCTGAGATGGCACTCACAGAGGGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR TCA 90 bp CCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAATGGAAACCCACGAAACTCCTTCCCTTTATTTTaGGCCTGTGTGTGTCTTACA +
Preference number: 4 (lower is better)
Translates to: PGLKIFLVRRYGNGNPRNSFPLF*ACVCLT
Trigger: TGTAAGACACACACAGGCTCAAAATAAAGGGAAGGA...GTTTCGTGGGTTTCCATTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR GCA 90 bp GTGTCACCAGTGAAGGCTGTGAAACAGCAAAGACAGTGGCTTGTCCCTTCCTCTATAGCGTTTATTATATaGTGGGGTCCCTATTCTGAG +
Preference number: 4 (lower is better)
Translates to: VSPVKAVKQQRQWLVPSSIAFII*WGPYSE
Trigger: CTCAGAATAGGGACCCCAGCATATAATAAACGCTAT...AGAGGAAGGGACAAGCCACTGTCTTTGCTGTTTCACAGCCTTCACTGGTGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR GCA 90 bp GTGTCACCAGTGAAGGCTGTGAAACAGCAAAGACAGTGGCTTGTCCCTTCCTCTTCTTGGATTGGATTTTaGCATCCTCCTGAATTTCCA +
Preference number: 4 (lower is better)
Translates to: VSPVKAVKQQRQWLVPSSSWIGF*HPPEFP
Trigger: TGGAAATTCAGGAGGATGGCAAAATCCAATCCAAGA...AGAGGAAGGGACAAGCCACTGTCTTTGCTGTTTCACAGCCTTCACTGGTGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR GCA 90 bp GGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAACTGTTTCTTCTAACTTaGCATAACACAATCTTTCTC +
Preference number: 4 (lower is better)
Translates to: GGGWKPRPEDLPGEKIWELFLLT*HNTIFL
Trigger: GAGAAAGATTGTGTTATGGCAAGTTAGAAGAAACAG...TTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp GTGTCACCAGTGAAGGCTGTGAAACAGCAAAGACAGTGGCTTGTCCCTTCCTCTTATCACACTCCAAGATaGGCATGTTTGACCACAAAA +
Preference number: 4 (lower is better)
Translates to: VSPVKAVKQQRQWLVPSSYHTPR*ACLTTK
Trigger: TTTTGTGGTCAAACATGCCCATCTTGGAGTGTGATA...AGAGGAAGGGACAAGCCACTGTCTTTGCTGTTTCACAGCCTTCACTGGTGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp TTGATAGTTCTGGCTGGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTAATCTAATAAGGACATaGTCAGTTTGCAAAGTTGTG +
Preference number: 4 (lower is better)
Translates to: LIVLAGGGWKPRPEDLPGNLIRT*SVCKVV
Trigger: CACAACTTTGCAAACTGACCATGTCCTTATTAGATT...ACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACCAGCCAGAACTATCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641850.1
CDS-3UTR CCA 90 bp TTGATAGTTCTGGCTGGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTTCTGTTGGTCCATATTaGCATATTTTGTGCATCAAA +
Preference number: 4 (lower is better)
Translates to: LIVLAGGGWKPRPEDLPGSVGPY*HILCIK
Trigger: TTTGATGCACAAAATATGCCAATATGGACCAACAGA...ACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACCAGCCAGAACTATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp TTGATAGTTCTGGCTGGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTACTGGTGTGATCATTTaGAGGACATATGATATTTTG +
Preference number: 4 (lower is better)
Translates to: LIVLAGGGWKPRPEDLPGTGVII*RTYDIL
Trigger: CAAAATATCATATGTCCTCCAAATGATCACACCAGT...ACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACCAGCCAGAACTATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp TTCTCCCTCTGTGAGTGCCATCTCAGGGATAATTCAAATCTTTGTCACCTGGAGCCTTTGCTGGAGAACTaGTGTGATCATTTGGAGGAC +
Preference number: 4 (lower is better)
Translates to: FSLCECHLRDNSNLCHLEPLLEN*CDHLED
Trigger: GTCCTCCAAATGATCACACCAGTTCTCCAGCAAAGG...CTCCAGGTGACAAAGATTTGAATTATCCCTGAGATGGCACTCACAGAGGGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp CCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAATGGAAACCCACGAAACGTTAAGGACCTTTGCTaGAGAACTGGTGTGATCATT +
Preference number: 4 (lower is better)
Translates to: PGLKIFLVRRYGNGNPRNVKDLC*RTGVII
Trigger: AATGATCACACCAGTTCTCCAGCAAAGGTCCTTAAC...GTTTCGTGGGTTTCCATTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp CCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAATGGAAACCCACGAAACCTTTATGTGCTGACCTaGAAGGCTATCTTTAGTGGA +
Preference number: 4 (lower is better)
Translates to: PGLKIFLVRRYGNGNPRNLYVLT*KAIFSG
Trigger: TCCACTAAAGATAGCCTTCCAGGTCAGCACATAAAG...GTTTCGTGGGTTTCCATTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR TCA 90 bp TTTTCCAAATTTGTCCCTGGACCTTCCCTCAAGATGGGCTTAGCTAGACTACATGGACCTGCCTTTAGCTaGAGTGATCTTCATGATGGA +
Preference number: 4 (lower is better)
Translates to: FSKFVPGPSLKMGLARLHGPAFS*SDLHDG
Trigger: TCCATCATGAAGATCACTTCAGCTAAAGGCAGGTCC...ATGTAGTCTAGCTAAGCCCATCTTGAGGGAAGGTCCAGGGACAAATTTGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR TCA 90 bp TTCTCCCTCTGTGAGTGCCATCTCAGGGATAATTCAAATCTTTGTCACCTGGAGAAATCTGTCAAAGCTTaGAGAACCTCCAGAGCTGGA +
Preference number: 4 (lower is better)
Translates to: FSLCECHLRDNSNLCHLEKSVKA*RTSRAG
Trigger: TCCAGCTCTGGAGGTTCTTCAAGCTTTGACAGATTT...CTCCAGGTGACAAAGATTTGAATTATCCCTGAGATGGCACTCACAGAGGGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR TCA 90 bp TTTATTATGCTGTATCAGCATATATGGGAGATGATGTTTCTGAACTCCTGGGGGGGGTTAGGGAGATTCTaGTGGGCCATATCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: FIMLYQHIWEMMFLNSWGGLGRF*WAISGR
Trigger: TCTGCCAGATATGGCCCATCAGAATCTCCCTAACCC...CCCCCAGGAGTTCAGAAACATCATCTCCCATATATGCTGATACAGCATAATAAA
46% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR TCA 90 bp AAAATAATGAACCTCCAGGACCTAAAGATCCTGATGTCTGTGGCATTGAGTCATGGGTTAGGGAGATTCTaGTGGGCCATATCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: KIMNLQDLKILMSVALSHGLGRF*WAISGR
Trigger: TCTGCCAGATATGGCCCATCAGAATCTCCCTAACCC...ATGACTCAATGCCACAGACATCAGGATCTTTAGGTCCTGGAGGTTCATTATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR TCA 90 bp TATGTTTCCTCACATTTGCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTCTGGGGTCCCTATTCTaGGTTTTGAATAAGTATCAG +
Preference number: 4 (lower is better)
Translates to: YVSSHLQLCSLSVLRTCGLGSLF*VLNKYQ
Trigger: CTGATACTTATTCAAAACTCAGAATAGGGACCCCAG...ACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGCAAATGTGAGGAAACATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR TCA 90 bp TTTTCCAAATTTGTCCCTGGACCTTCCCTCAAGATGGGCTTAGCTAGACTACATCTCTGTGTATTAGACTaGAGACTGAAAGCCCTGGTG +
Preference number: 4 (lower is better)
Translates to: FSKFVPGPSLKMGLARLHLCVLD*RLKALV
Trigger: CACCAGGGCTTTCAGTCTTCAGTCTAATACACAGAG...ATGTAGTCTAGCTAAGCCCATCTTGAGGGAAGGTCCAGGGACAAATTTGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR TCA 90 bp GTGTCACCAGTGAAGGCTGTGAAACAGCAAAGACAGTGGCTTGTCCCTTCCTCTCATTTGGAGGACATATaGTATTTTGGCCATTTGAGT +
Preference number: 4 (lower is better)
Translates to: VSPVKAVKQQRQWLVPSSHLEDI*YFGHLS
Trigger: ACTCAAATGGCCAAAATATCATATGTCCTCCAAATG...AGAGGAAGGGACAAGCCACTGTCTTTGCTGTTTCACAGCCTTCACTGGTGACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR TCA 90 bp TTTTCCAAATTTGTCCCTGGACCTTCCCTCAAGATGGGCTTAGCTAGACTACATTTTTCCCTAAGGTGGTaGCCTATAGAGGTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: FSKFVPGPSLKMGLARLHFSLRW*PIEVPL
Trigger: CAGAGGAACCTCTATAGGTCACCACCTTAGGGAAAA...ATGTAGTCTAGCTAAGCCCATCTTGAGGGAAGGTCCAGGGACAAATTTGGAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR GCA 90 bp GTGTCACCAGTGAAGGCTGTGAAACAGCAAAGACAGTGGCTTGTCCCTTCCTCTACAAAAGTGATAGTTTaGTGTTCCTGTAAGAGGTTG +
Preference number: 4 (lower is better)
Translates to: VSPVKAVKQQRQWLVPSSTKVIV*CSCKRL
Trigger: CAACCTCTTACAGGAACAGCAAACTATCACTTTTGT...AGAGGAAGGGACAAGCCACTGTCTTTGCTGTTTCACAGCCTTCACTGGTGACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR GCA 90 bp CCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAATGGAAACCCACGAAACCAGTTTGCAAAGTTGTaGAGGGTACAAAATCAGGTA +
Preference number: 4 (lower is better)
Translates to: PGLKIFLVRRYGNGNPRNQFAKL*RVQNQV
Trigger: TACCTGATTTTGTACCCTGCACAACTTTGCAAACTG...GTTTCGTGGGTTTCCATTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641850.1
CDS-3UTR GCA 90 bp CCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAATGGAAACCCACGAAACGGAGGCTTTGATATCTaGAATGTTAGTTTGGATTCC +
Preference number: 4 (lower is better)
Translates to: PGLKIFLVRRYGNGNPRNGGFDI*NVSLDS
Trigger: GGAATCCAAACTAACATTGCAGATATCAAAGCCTCC...GTTTCGTGGGTTTCCATTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR GCA 90 bp TTTATTATGCTGTATCAGCATATATGGGAGATGATGTTTCTGAACTCCTGGGGGAGGGCTGCTGTTTTATaGTTGGGGGCTGCTCCAGTA +
Preference number: 4 (lower is better)
Translates to: FIMLYQHIWEMMFLNSWGRAAVL*LGAAPV
Trigger: TACTGGAGCAGCCCCCAAGCATAAAACAGCAGCCCT...CCCCCAGGAGTTCAGAAACATCATCTCCCATATATGCTGATACAGCATAATAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR GCA 90 bp TATGTTTCCTCACATTTGCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTCCTGACTCCCCATCTTaGTTATGTCACTTATATAGC +
Preference number: 4 (lower is better)
Translates to: YVSSHLQLCSLSVLRTCGPDSPS*LCHLYS
Trigger: GCTATATAAGTGACATAAGCAAGATGGGGAGTCAGG...ACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGCAAATGTGAGGAAACATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp GTGTCACCAGTGAAGGCTGTGAAACAGCAAAGACAGTGGCTTGTCCCTTCCTCTTTACGCCAGGCAGTTTaGACAAGGAGAAAATTTTTA +
Preference number: 4 (lower is better)
Translates to: VSPVKAVKQQRQWLVPSSLRQAV*TRRKFL
Trigger: TAAAAATTTTCTCCTTGTCCAAACTGCCTGGCGTAA...AGAGGAAGGGACAAGCCACTGTCTTTGCTGTTTCACAGCCTTCACTGGTGACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp AAAATAATGAACCTCCAGGACCTAAAGATCCTGATGTCTGTGGCATTGAGTCATCACACTAGCTGCTTCTaGTCAGCCATCTTGCCCACT +
Preference number: 4 (lower is better)
Translates to: KIMNLQDLKILMSVALSHHTSCF*SAILPT
Trigger: AGTGGGCAAGATGGCTGACCAGAAGCAGCTAGTGTG...ATGACTCAATGCCACAGACATCAGGATCTTTAGGTCCTGGAGGTTCATTATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp TTTATTATGCTGTATCAGCATATATGGGAGATGATGTTTCTGAACTCCTGGGGGTGGAAGTGGGGCCTGTaGGTTGTTGCTGTTAACACC +
Preference number: 4 (lower is better)
Translates to: FIMLYQHIWEMMFLNSWGWKWGL*VVAVNT
Trigger: GGTGTTAACAGCAACAACCCACAGGCCCCACTTCCA...CCCCCAGGAGTTCAGAAACATCATCTCCCATATATGCTGATACAGCATAATAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp TTCTCCCTCTGTGAGTGCCATCTCAGGGATAATTCAAATCTTTGTCACCTGGAGTGCTCATTCATTAGTTaGAGCGTGTCAAGGGCAGTT +
Preference number: 4 (lower is better)
Translates to: FSLCECHLRDNSNLCHLECSFIS*SVSRAV
Trigger: AACTGCCCTTGACACGCTCCAACTAATGAATGAGCA...CTCCAGGTGACAAAGATTTGAATTATCCCTGAGATGGCACTCACAGAGGGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp TATGTTTCCTCACATTTGCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTGTTAAGGACCTTTGCTaGAGAACTGGTGTGATCATT +
Preference number: 4 (lower is better)
Translates to: YVSSHLQLCSLSVLRTCGVKDLC*RTGVII
Trigger: AATGATCACACCAGTTCTCCAGCAAAGGTCCTTAAC...ACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGCAAATGTGAGGAAACATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp TATGTTTCCTCACATTTGCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTCTTTATGTGCTGACCTaGAAGGCTATCTTTAGTGGA +
Preference number: 4 (lower is better)
Translates to: YVSSHLQLCSLSVLRTCGLYVLT*KAIFSG
Trigger: TCCACTAAAGATAGCCTTCCAGGTCAGCACATAAAG...ACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGCAAATGTGAGGAAACATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp TTTATTATGCTGTATCAGCATATATGGGAGATGATGTTTCTGAACTCCTGGGGGCATAGGGAGGAGTCCTaGAAGCTGGAGCATAGATGC +
Preference number: 4 (lower is better)
Translates to: FIMLYQHIWEMMFLNSWGHREES*KLEHRC
Trigger: GCATCTATGCTCCAGCTTCCAGGACTCCTCCCTATG...CCCCCAGGAGTTCAGAAACATCATCTCCCATATATGCTGATACAGCATAATAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR TCA 90 bp TTTTCCAAATTTGTCCCTGGACCTTCCCTCAAGATGGGCTTAGCTAGACTACATAAATCTGTCAAAGCTTaGAGAACCTCCAGAGCTGGA +
Preference number: 4 (lower is better)
Translates to: FSKFVPGPSLKMGLARLHKSVKA*RTSRAG
Trigger: TCCAGCTCTGGAGGTTCTTCAAGCTTTGACAGATTT...ATGTAGTCTAGCTAAGCCCATCTTGAGGGAAGGTCCAGGGACAAATTTGGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR TCA 90 bp CCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAATGGAAACCCACGAAACCTAGATGAATATAGGTaGTCAAAATCCTATCCAGTG +
Preference number: 4 (lower is better)
Translates to: PGLKIFLVRRYGNGNPRNLDEYR*SKSYPV
Trigger: CACTGGATAGGATTTTGATCACCTATATTCATCTAG...GTTTCGTGGGTTTCCATTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641850.1
CDS-3UTR TCA 90 bp TTTTCCAAATTTGTCCCTGGACCTTCCCTCAAGATGGGCTTAGCTAGACTACATGAGCCATCTTTGATCTaGGAAGCCACAGGAAACAAA +
Preference number: 4 (lower is better)
Translates to: FSKFVPGPSLKMGLARLHEPSLI*EATGNK
Trigger: TTTGTTTCCTGTGGCTTCTCAGATCAAAGATGGCTC...ATGTAGTCTAGCTAAGCCCATCTTGAGGGAAGGTCCAGGGACAAATTTGGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR TCA 90 bp AAAATAATGAACCTCCAGGACCTAAAGATCCTGATGTCTGTGGCATTGAGTCATTCTGAACAGCAAAGATaGCAGCCCAGCTCTTCCCTT +
Preference number: 4 (lower is better)
Translates to: KIMNLQDLKILMSVALSHSEQQR*QPSSSL
Trigger: AAGGGAAGAGCTGGGCTGTCATCTTTGCTGTTCAGA...ATGACTCAATGCCACAGACATCAGGATCTTTAGGTCCTGGAGGTTCATTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR TCA 90 bp TTCTCCCTCTGTGAGTGCCATCTCAGGGATAATTCAAATCTTTGTCACCTGGAGTCCCCTCCCTTTCAGTaGTGTCAATTACTTGTAGAT +
Preference number: 4 (lower is better)
Translates to: FSLCECHLRDNSNLCHLESPPFQ*CQLLVD
Trigger: ATCTACAAGTAATTGACATCACTGAAAGGGAGGGGA...CTCCAGGTGACAAAGATTTGAATTATCCCTGAGATGGCACTCACAGAGGGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR TCA 90 bp TTCTCCCTCTGTGAGTGCCATCTCAGGGATAATTCAAATCTTTGTCACCTGGAGTCCTTCCCTTTATTTTaGGCCTGTGTGTGTCTTACA +
Preference number: 4 (lower is better)
Translates to: FSLCECHLRDNSNLCHLESFPLF*ACVCLT
Trigger: TGTAAGACACACACAGGCTCAAAATAAAGGGAAGGA...CTCCAGGTGACAAAGATTTGAATTATCCCTGAGATGGCACTCACAGAGGGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR GCA 90 bp GTGTCACCAGTGAAGGCTGTGAAACAGCAAAGACAGTGGCTTGTCCCTTCCTCTACTCAGTGTGTCTCTTaGTATTCAGAGATCATAAAT +
Preference number: 4 (lower is better)
Translates to: VSPVKAVKQQRQWLVPSSTQCVS*YSEIIN
Trigger: ATTTATGATCTCTGAATAGCAAGAGACACACTGAGT...AGAGGAAGGGACAAGCCACTGTCTTTGCTGTTTCACAGCCTTCACTGGTGACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641850.1
CDS-3UTR GCA 90 bp AAAATAATGAACCTCCAGGACCTAAAGATCCTGATGTCTGTGGCATTGAGTCATTGTGTTCCCTCTCAGTaGTCAGAACGTGTGGTTTCC +
Preference number: 4 (lower is better)
Translates to: KIMNLQDLKILMSVALSHCVPSQ*SERVVS
Trigger: GGAAACCACACGTTCTGAGCACTGAGAGGGAACACA...ATGACTCAATGCCACAGACATCAGGATCTTTAGGTCCTGGAGGTTCATTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR GCA 90 bp TTTTCCAAATTTGTCCCTGGACCTTCCCTCAAGATGGGCTTAGCTAGACTACATATGTTTCCTCACATTTaGAGCTGTGTTCCCTCTCAG +
Preference number: 4 (lower is better)
Translates to: FSKFVPGPSLKMGLARLHMFPHI*SCVPSQ
Trigger: CTGAGAGGGAACACAGCTGCAAATGTGAGGAAACAT...ATGTAGTCTAGCTAAGCCCATCTTGAGGGAAGGTCCAGGGACAAATTTGGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR GCA 90 bp CCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAATGGAAACCCACGAAACTTGATTCTGTCATTGTaGTGTCAGCTGGTTATTATG +
Preference number: 4 (lower is better)
Translates to: PGLKIFLVRRYGNGNPRNLILSL*CQLVIM
Trigger: CATAATAACCAGCTGACAGCACAATGACAGAATCAA...GTTTCGTGGGTTTCCATTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR GCA 90 bp GTGTCACCAGTGAAGGCTGTGAAACAGCAAAGACAGTGGCTTGTCCCTTCCTCTCTGTTTCTTCTAACTTaGCATAACACAATCTTTCTC +
Preference number: 4 (lower is better)
Translates to: VSPVKAVKQQRQWLVPSSLFLLT*HNTIFL
Trigger: GAGAAAGATTGTGTTATGGCAAGTTAGAAGAAACAG...AGAGGAAGGGACAAGCCACTGTCTTTGCTGTTTCACAGCCTTCACTGGTGACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp AAAATAATGAACCTCCAGGACCTAAAGATCCTGATGTCTGTGGCATTGAGTCATGTTCCTGTAAGAGGTTaGAGAGCATCTTGGGGACTG +
Preference number: 4 (lower is better)
Translates to: KIMNLQDLKILMSVALSHVPVRG*RASWGL
Trigger: CAGTCCCCAAGATGCTCTCCAACCTCTTACAGGAAC...ATGACTCAATGCCACAGACATCAGGATCTTTAGGTCCTGGAGGTTCATTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp CCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAATGGAAACCCACGAAACACTGGAAGAATTACATaGATATTGAGACGGTACAGA +
Preference number: 4 (lower is better)
Translates to: PGLKIFLVRRYGNGNPRNTGRIT*ILRRYR
Trigger: TCTGTACCGTCTCAATATCCATGTAATTCTTCCAGT...GTTTCGTGGGTTTCCATTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp GTGTCACCAGTGAAGGCTGTGAAACAGCAAAGACAGTGGCTTGTCCCTTCCTCTTCTGTTGGTCCATATTaGCATATTTTGTGCATCAAA +
Preference number: 4 (lower is better)
Translates to: VSPVKAVKQQRQWLVPSSSVGPY*HILCIK
Trigger: TTTGATGCACAAAATATGCCAATATGGACCAACAGA...AGAGGAAGGGACAAGCCACTGTCTTTGCTGTTTCACAGCCTTCACTGGTGACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp AAAATAATGAACCTCCAGGACCTAAAGATCCTGATGTCTGTGGCATTGAGTCATTATCCTCAGATCATCTaGAGATCAGCTGGGACTGGC +
Preference number: 4 (lower is better)
Translates to: KIMNLQDLKILMSVALSHYPQII*RSAGTG
Trigger: GCCAGTCCCAGCTGATCTCCAGATGATCTGAGGATA...ATGACTCAATGCCACAGACATCAGGATCTTTAGGTCCTGGAGGTTCATTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp TTTTCCAAATTTGTCCCTGGACCTTCCCTCAAGATGGGCTTAGCTAGACTACATGGAATTCCAAGCCAGTaGATCTTATCTTGTGAGGTG +
Preference number: 4 (lower is better)
Translates to: FSKFVPGPSLKMGLARLHGIPSQ*ILSCEV
Trigger: CACCTCACAAGATAAGATCCACTGGCTTGGAATTCC...ATGTAGTCTAGCTAAGCCCATCTTGAGGGAAGGTCCAGGGACAAATTTGGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp TTTTCCAAATTTGTCCCTGGACCTTCCCTCAAGATGGGCTTAGCTAGACTACATCCTGGTGAGAAGATATaGGAATGGAAACCCACGAAA +
Preference number: 4 (lower is better)
Translates to: FSKFVPGPSLKMGLARLHPGEKI*EWKPTK
Trigger: TTTCGTGGGTTTCCATTCCCATATCTTCTCACCAGG...ATGTAGTCTAGCTAAGCCCATCTTGAGGGAAGGTCCAGGGACAAATTTGGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp TTTATTATGCTGTATCAGCATATATGGGAGATGATGTTTCTGAACTCCTGGGGGCTGCAGCTCCTTAACTaGACTGCAGAGCCTTCCTAT +
Preference number: 4 (lower is better)
Translates to: FIMLYQHIWEMMFLNSWGLQLLN*TAEPSY
Trigger: ATAGGAAGGCTCTGCAGTCCAGTTAAGGAGCTGCAG...CCCCCAGGAGTTCAGAAACATCATCTCCCATATATGCTGATACAGCATAATAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR TCA 90 bp AAAATAATGAACCTCCAGGACCTAAAGATCCTGATGTCTGTGGCATTGAGTCATGATCCTGGGAAAATCTaGGAATCCCAGCAGGATGAA +
Preference number: 4 (lower is better)
Translates to: KIMNLQDLKILMSVALSHDPGKI*ESQQDE
Trigger: TTCATCCTGCTGGGATTCTCAGATTTTCCCAGGATC...ATGACTCAATGCCACAGACATCAGGATCTTTAGGTCCTGGAGGTTCATTATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR TCA 90 bp TTCTCCCTCTGTGAGTGCCATCTCAGGGATAATTCAAATCTTTGTCACCTGGAGTGTTGCTATTGGCTGTaGACTTTGAATATCATCTCC +
Preference number: 4 (lower is better)
Translates to: FSLCECHLRDNSNLCHLECCYWL*TLNIIS
Trigger: GGAGATGATATTCAAAGTTCACAGCCAATAGCAACA...CTCCAGGTGACAAAGATTTGAATTATCCCTGAGATGGCACTCACAGAGGGAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR TCA 90 bp TTTATTATGCTGTATCAGCATATATGGGAGATGATGTTTCTGAACTCCTGGGGGTTTTCCCTAAGGTGGTaGCCTATAGAGGTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: FIMLYQHIWEMMFLNSWGFSLRW*PIEVPL
Trigger: CAGAGGAACCTCTATAGGTCACCACCTTAGGGAAAA...CCCCCAGGAGTTCAGAAACATCATCTCCCATATATGCTGATACAGCATAATAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR GCA 90 bp TATGTTTCCTCACATTTGCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTACAAAAGTGATAGTTTaGTGTTCCTGTAAGAGGTTG +
Preference number: 4 (lower is better)
Translates to: YVSSHLQLCSLSVLRTCGTKVIV*CSCKRL
Trigger: CAACCTCTTACAGGAACAGCAAACTATCACTTTTGT...ACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGCAAATGTGAGGAAACATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR GCA 90 bp TTCTCCCTCTGTGAGTGCCATCTCAGGGATAATTCAAATCTTTGTCACCTGGAGAGAAGACAGGGTTCTTaGCAAAGGTTGAAATTGCTT +
Preference number: 4 (lower is better)
Translates to: FSLCECHLRDNSNLCHLERRQGS*QRLKLL
Trigger: AAGCAATTTCAACCTTTGGCAAGAACCCTGTCTTCT...CTCCAGGTGACAAAGATTTGAATTATCCCTGAGATGGCACTCACAGAGGGAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR GCA 90 bp TATGTTTCCTCACATTTGCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTGCAGCTATCTCATGTTaGTCTTTCTTAAAGACACAA +
Preference number: 4 (lower is better)
Translates to: YVSSHLQLCSLSVLRTCGAAISC*SFLKTQ
Trigger: TTGTGTCTTTAAGAAAGAGCAACATGAGATAGCTGC...ACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGCAAATGTGAGGAAACATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR GCA 90 bp TTCTCCCTCTGTGAGTGCCATCTCAGGGATAATTCAAATCTTTGTCACCTGGAGGGAGGCTTTGATATCTaGAATGTTAGTTTGGATTCC +
Preference number: 4 (lower is better)
Translates to: FSLCECHLRDNSNLCHLEGGFDI*NVSLDS
Trigger: GGAATCCAAACTAACATTGCAGATATCAAAGCCTCC...CTCCAGGTGACAAAGATTTGAATTATCCCTGAGATGGCACTCACAGAGGGAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp TATGTTTCCTCACATTTGCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTCTGTATCAGCATATATaGGAGATGATGTTTCTGAAC +
Preference number: 4 (lower is better)
Translates to: YVSSHLQLCSLSVLRTCGLYQHI*EMMFLN
Trigger: GTTCAGAAACATCATCTCCCATATATGCTGATACAG...ACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGCAAATGTGAGGAAACATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp TTTTCCAAATTTGTCCCTGGACCTTCCCTCAAGATGGGCTTAGCTAGACTACATTTCTTATGCTACAGCTaGTGTAGGCAAGGAAATTGC +
Preference number: 4 (lower is better)
Translates to: FSKFVPGPSLKMGLARLHFLCYS*CRQGNC
Trigger: GCAATTTCCTTGCCTACACCAGCTGTAGCATAAGAA...ATGTAGTCTAGCTAAGCCCATCTTGAGGGAAGGTCCAGGGACAAATTTGGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp TTTATTATGCTGTATCAGCATATATGGGAGATGATGTTTCTGAACTCCTGGGGGAACCTCCAACTTTGCTaGGGCTGCAGCTACTTTTAC +
Preference number: 4 (lower is better)
Translates to: FIMLYQHIWEMMFLNSWGNLQLC*GCSYFY
Trigger: GTAAAAGTAGCTGCAGCCCCAGCAAAGTTGGAGGTT...CCCCCAGGAGTTCAGAAACATCATCTCCCATATATGCTGATACAGCATAATAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp TTTATTATGCTGTATCAGCATATATGGGAGATGATGTTTCTGAACTCCTGGGGGCCTTTGCTGGAGAACTaGTGTGATCATTTGGAGGAC +
Preference number: 4 (lower is better)
Translates to: FIMLYQHIWEMMFLNSWGPLLEN*CDHLED
Trigger: GTCCTCCAAATGATCACACCAGTTCTCCAGCAAAGG...CCCCCAGGAGTTCAGAAACATCATCTCCCATATATGCTGATACAGCATAATAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp AAAATAATGAACCTCCAGGACCTAAAGATCCTGATGTCTGTGGCATTGAGTCATTCCAGTTGTTTTCTGTaGGTGATGAGGGCTGAGATC +
Preference number: 4 (lower is better)
Translates to: KIMNLQDLKILMSVALSHSSCFL*VMRAEI
Trigger: GATCTCAGCCCTCATCACCCACAGAAAACAACTGGA...ATGACTCAATGCCACAGACATCAGGATCTTTAGGTCCTGGAGGTTCATTATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR CAA 72 bp CATATTCTGAATTCTATTTCTGTCATTCTAGCCAGTTaGGCCTGGTTAAGGACCTTTGCTGGAGAACTGGTG +
Preference number: 4 (lower is better)
Translates to: HILNSISVILAS*AWLRTFAGELV
Trigger: CACCAGTTCTCCAGCAAAGGTCCTTAACCAGGCCAAACTGGCTAGAATGACAGAAATAGAATTCAGAATATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR TCA 90 bp TTCTCCCTCTGTGAGTGCCATCTCAGGGATAATTCAAATCTTTGTCACCTGGAGACTCAGTCCCATCGTTaGAAAGATAAAGTACTGAAT +
Preference number: 4 (lower is better)
Translates to: FSLCECHLRDNSNLCHLETQSHR*KDKVLN
Trigger: ATTCAGTACTTTATCTTTTCAACGATGGGACTGAGT...CTCCAGGTGACAAAGATTTGAATTATCCCTGAGATGGCACTCACAGAGGGAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR TCA 90 bp TTCTCCCTCTGTGAGTGCCATCTCAGGGATAATTCAAATCTTTGTCACCTGGAGATAGACAAAGATTCCTaGTGTATAGAAGAGGGAAAC +
Preference number: 4 (lower is better)
Translates to: FSLCECHLRDNSNLCHLEIDKDS*CIEEGN
Trigger: GTTTCCCTCTTCTATACATCAGGAATCTTTGTCTAT...CTCCAGGTGACAAAGATTTGAATTATCCCTGAGATGGCACTCACAGAGGGAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR TCA 90 bp TTCTCCCTCTGTGAGTGCCATCTCAGGGATAATTCAAATCTTTGTCACCTGGAGCTTTTTACAGAAGGTTaGGTAAGGAGTAAGAGAATC +
Preference number: 4 (lower is better)
Translates to: FSLCECHLRDNSNLCHLELFTEG*VRSKRI
Trigger: GATTCTCTTACTCCTTACTCAACCTTCTGTAAAAAG...CTCCAGGTGACAAAGATTTGAATTATCCCTGAGATGGCACTCACAGAGGGAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR TCA 90 bp TTCTCCCTCTGTGAGTGCCATCTCAGGGATAATTCAAATCTTTGTCACCTGGAGTTCTATCCCACTTCATaGTTAAAATCACCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: FSLCECHLRDNSNLCHLEFYPTS*LKSPPS
Trigger: AGAAGGAGGTGATTTTAATCATGAAGTGGGATAGAA...CTCCAGGTGACAAAGATTTGAATTATCCCTGAGATGGCACTCACAGAGGGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR GCA 90 bp TTTTCCAAATTTGTCCCTGGACCTTCCCTCAAGATGGGCTTAGCTAGACTACATTCTTGGATTGGATTTTaGCATCCTCCTGAATTTCCA +
Preference number: 4 (lower is better)
Translates to: FSKFVPGPSLKMGLARLHSWIGF*HPPEFP
Trigger: TGGAAATTCAGGAGGATGGCAAAATCCAATCCAAGA...ATGTAGTCTAGCTAAGCCCATCTTGAGGGAAGGTCCAGGGACAAATTTGGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR GCA 90 bp TATGTTTCCTCACATTTGCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTCCTTTCTATATTTACTaGTCCTTTCAAGATCTCTTG +
Preference number: 4 (lower is better)
Translates to: YVSSHLQLCSLSVLRTCGPFYIY*SFQDLL
Trigger: CAAGAGATCTTGAAAGGAGCAGTAAATATAGAAAGG...ACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGCAAATGTGAGGAAACATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp TTTTCCAAATTTGTCCCTGGACCTTCCCTCAAGATGGGCTTAGCTAGACTACATATGGGTGTATGGAGGTaGGAATCCATCCTTATTAAA +
Preference number: 4 (lower is better)
Translates to: FSKFVPGPSLKMGLARLHMGVWR*ESILIK
Trigger: TTTAATAAGGATGGATTCCCACCTCCATACACCCAT...ATGTAGTCTAGCTAAGCCCATCTTGAGGGAAGGTCCAGGGACAAATTTGGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp TTTTCCAAATTTGTCCCTGGACCTTCCCTCAAGATGGGCTTAGCTAGACTACATAGCAAAGCACCAATTTaGAATAAAGAAGCAGTGAGG +
Preference number: 4 (lower is better)
Translates to: FSKFVPGPSLKMGLARLHSKAPI*NKEAVR
Trigger: CCTCACTGCTTCTTTATTCCAAATTGGTGCTTTGCT...ATGTAGTCTAGCTAAGCCCATCTTGAGGGAAGGTCCAGGGACAAATTTGGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp TTTTCCAAATTTGTCCCTGGACCTTCCCTCAAGATGGGCTTAGCTAGACTACATTATCACACTCCAAGATaGGCATGTTTGACCACAAAA +
Preference number: 4 (lower is better)
Translates to: FSKFVPGPSLKMGLARLHYHTPR*ACLTTK
Trigger: TTTTGTGGTCAAACATGCCCATCTTGGAGTGTGATA...ATGTAGTCTAGCTAAGCCCATCTTGAGGGAAGGTCCAGGGACAAATTTGGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp TTCTCCCTCTGTGAGTGCCATCTCAGGGATAATTCAAATCTTTGTCACCTGGAGTTACGCCAGGCAGTTTaGACAAGGAGAAAATTTTTA +
Preference number: 4 (lower is better)
Translates to: FSLCECHLRDNSNLCHLELRQAV*TRRKFL
Trigger: TAAAAATTTTCTCCTTGTCCAAACTGCCTGGCGTAA...CTCCAGGTGACAAAGATTTGAATTATCCCTGAGATGGCACTCACAGAGGGAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp TTTATTATGCTGTATCAGCATATATGGGAGATGATGTTTCTGAACTCCTGGGGGGGAATTCCAAGCCAGTaGATCTTATCTTGTGAGGTG +
Preference number: 4 (lower is better)
Translates to: FIMLYQHIWEMMFLNSWGGIPSQ*ILSCEV
Trigger: CACCTCACAAGATAAGATCCACTGGCTTGGAATTCC...CCCCCAGGAGTTCAGAAACATCATCTCCCATATATGCTGATACAGCATAATAAA
42% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp TATGTTTCCTCACATTTGCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTACTGGTGTGATCATTTaGAGGACATATGATATTTTG +
Preference number: 4 (lower is better)
Translates to: YVSSHLQLCSLSVLRTCGTGVII*RTYDIL
Trigger: CAAAATATCATATGTCCTCCAAATGATCACACCAGT...ACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGCAAATGTGAGGAAACATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp TATGTTTCCTCACATTTGCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTCTTAGGAGCTTAGTTTaGCTAGATATGAAATTCTTG +
Preference number: 4 (lower is better)
Translates to: YVSSHLQLCSLSVLRTCGLRSLV*LDMKFL
Trigger: CAAGAATTTCATATCTAGCCAAACTAAGCTCCTAAG...ACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGCAAATGTGAGGAAACATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR TCA 90 bp TTTTCCAAATTTGTCCCTGGACCTTCCCTCAAGATGGGCTTAGCTAGACTACATACTCAGTCCCATCGTTaGAAAGATAAAGTACTGAAT +
Preference number: 4 (lower is better)
Translates to: FSKFVPGPSLKMGLARLHTQSHR*KDKVLN
Trigger: ATTCAGTACTTTATCTTTTCAACGATGGGACTGAGT...ATGTAGTCTAGCTAAGCCCATCTTGAGGGAAGGTCCAGGGACAAATTTGGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR TCA 90 bp TTTATTATGCTGTATCAGCATATATGGGAGATGATGTTTCTGAACTCCTGGGGGGAAACAGCTGTTAGATaGGAAGCACAGGTGTTGAAT +
Preference number: 4 (lower is better)
Translates to: FIMLYQHIWEMMFLNSWGETAVR*EAQVLN
Trigger: ATTCAACACCTGTGCTTCTCATCTAACAGCTGTTTC...CCCCCAGGAGTTCAGAAACATCATCTCCCATATATGCTGATACAGCATAATAAA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR TCA 90 bp TTTATTATGCTGTATCAGCATATATGGGAGATGATGTTTCTGAACTCCTGGGGGATGTTCACCATCTCCTaGGACAATTCGCATAGGAAA +
Preference number: 4 (lower is better)
Translates to: FIMLYQHIWEMMFLNSWGMFTIS*DNSHRK
Trigger: TTTCCTATGCGAATTGTCTCAGGAGATGGTGAACAT...CCCCCAGGAGTTCAGAAACATCATCTCCCATATATGCTGATACAGCATAATAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641850.1
CDS-3UTR TCA 90 bp TTTTCCAAATTTGTCCCTGGACCTTCCCTCAAGATGGGCTTAGCTAGACTACATTGCAAAATCCAGTGCTaGCTGCAACATTCATTTATT +
Preference number: 4 (lower is better)
Translates to: FSKFVPGPSLKMGLARLHCKIQC*LQHSFI
Trigger: AATAAATGAATGTTGCAGTCAGCACTGGATTTTGCA...ATGTAGTCTAGCTAAGCCCATCTTGAGGGAAGGTCCAGGGACAAATTTGGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR TCA 90 bp TTTATTATGCTGTATCAGCATATATGGGAGATGATGTTTCTGAACTCCTGGGGGTCCCCTCCCTTTCAGTaGTGTCAATTACTTGTAGAT +
Preference number: 4 (lower is better)
Translates to: FIMLYQHIWEMMFLNSWGSPPFQ*CQLLVD
Trigger: ATCTACAAGTAATTGACATCACTGAAAGGGAGGGGA...CCCCCAGGAGTTCAGAAACATCATCTCCCATATATGCTGATACAGCATAATAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR GCA 90 bp AAAATAATGAACCTCCAGGACCTAAAGATCCTGATGTCTGTGGCATTGAGTCATTTCTCTGAACATGACTaGAGGTTAGCTTGTCTAGGT +
Preference number: 4 (lower is better)
Translates to: KIMNLQDLKILMSVALSHFSEHD*RLACLG
Trigger: ACCTAGACAAGCTAACCTGCAGTCATGTTCAGAGAA...ATGACTCAATGCCACAGACATCAGGATCTTTAGGTCCTGGAGGTTCATTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR GCA 90 bp TTCTCCCTCTGTGAGTGCCATCTCAGGGATAATTCAAATCTTTGTCACCTGGAGCCTTTCTATATTTACTaGTCCTTTCAAGATCTCTTG +
Preference number: 4 (lower is better)
Translates to: FSLCECHLRDNSNLCHLEPFYIY*SFQDLL
Trigger: CAAGAGATCTTGAAAGGAGCAGTAAATATAGAAAGG...CTCCAGGTGACAAAGATTTGAATTATCCCTGAGATGGCACTCACAGAGGGAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR GCA 90 bp TTTATTATGCTGTATCAGCATATATGGGAGATGATGTTTCTGAACTCCTGGGGGCCTGACTCCCCATCTTaGTTATGTCACTTATATAGC +
Preference number: 4 (lower is better)
Translates to: FIMLYQHIWEMMFLNSWGPDSPS*LCHLYS
Trigger: GCTATATAAGTGACATAAGCAAGATGGGGAGTCAGG...CCCCCAGGAGTTCAGAAACATCATCTCCCATATATGCTGATACAGCATAATAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR TCA 90 bp AAAATAATGAACCTCCAGGACCTAAAGATCCTGATGTCTGTGGCATTGAGTCATGAATTACATGGATATTaGGACGGTACAGAATCCACT +
Preference number: 4 (lower is better)
Translates to: KIMNLQDLKILMSVALSHELHGY*DGTEST
Trigger: AGTGGATTCTGTACCGTCTCAATATCCATGTAATTC...ATGACTCAATGCCACAGACATCAGGATCTTTAGGTCCTGGAGGTTCATTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR TCA 90 bp TTTATTATGCTGTATCAGCATATATGGGAGATGATGTTTCTGAACTCCTGGGGGTGTTGCTATTGGCTGTaGACTTTGAATATCATCTCC +
Preference number: 4 (lower is better)
Translates to: FIMLYQHIWEMMFLNSWGCCYWL*TLNIIS
Trigger: GGAGATGATATTCAAAGTTCACAGCCAATAGCAACA...CCCCCAGGAGTTCAGAAACATCATCTCCCATATATGCTGATACAGCATAATAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR TCA 90 bp TTTATTATGCTGTATCAGCATATATGGGAGATGATGTTTCTGAACTCCTGGGGGTTGGCTCAGTGCTCCTaGAATTTTATGTTTGAGGTT +
Preference number: 4 (lower is better)
Translates to: FIMLYQHIWEMMFLNSWGLAQCS*NFMFEV
Trigger: AACCTCAAACATAAAATTTCAGGAGCACTGAGCCAA...CCCCCAGGAGTTCAGAAACATCATCTCCCATATATGCTGATACAGCATAATAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641998.1
CDS-3UTR GCA 90 bp TTTTCCAAATTTGTCCCTGGACCTTCCCTCAAGATGGGCTTAGCTAGACTACATACCATGTCTTTATTATaGTGTATCAGCATATATGGG +
Preference number: 4 (lower is better)
Translates to: FSKFVPGPSLKMGLARLHTMSLL*CISIYG
Trigger: CCCATATATGCTGATACAGCATAATAAAGACATGGT...ATGTAGTCTAGCTAAGCCCATCTTGAGGGAAGGTCCAGGGACAAATTTGGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR GCA 90 bp AAAATAATGAACCTCCAGGACCTAAAGATCCTGATGTCTGTGGCATTGAGTCATATAGCGTTTATTATATaGTGGGGTCCCTATTCTGAG +
Preference number: 4 (lower is better)
Translates to: KIMNLQDLKILMSVALSHIAFII*WGPYSE
Trigger: CTCAGAATAGGGACCCCAGCATATAATAAACGCTAT...ATGACTCAATGCCACAGACATCAGGATCTTTAGGTCCTGGAGGTTCATTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp TTTTCCAAATTTGTCCCTGGACCTTCCCTCAAGATGGGCTTAGCTAGACTACATGTTTCTGAATTTCTCTaGCCTAAGTTTATTCATCTG +
Preference number: 4 (lower is better)
Translates to: FSKFVPGPSLKMGLARLHVSEFL*PKFIHL
Trigger: CAGATGAATAAACTTAGGCCAGAGAAATTCAGAAAC...ATGTAGTCTAGCTAAGCCCATCTTGAGGGAAGGTCCAGGGACAAATTTGGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp TTTTCCAAATTTGTCCCTGGACCTTCCCTCAAGATGGGCTTAGCTAGACTACATAATCAACTTATTTTCTaGATGTTTTCACTGGGCCAA +
Preference number: 4 (lower is better)
Translates to: FSKFVPGPSLKMGLARLHNQLIF*MFSLGQ
Trigger: TTGGCCCAGTGAAAACATCCAGAAAATAAGTTGATT...ATGTAGTCTAGCTAAGCCCATCTTGAGGGAAGGTCCAGGGACAAATTTGGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR TCA 90 bp TTTATTATGCTGTATCAGCATATATGGGAGATGATGTTTCTGAACTCCTGGGGGATAGACAAAGATTCCTaGTGTATAGAAGAGGGAAAC +
Preference number: 4 (lower is better)
Translates to: FIMLYQHIWEMMFLNSWGIDKDS*CIEEGN
Trigger: GTTTCCCTCTTCTATACATCAGGAATCTTTGTCTAT...CCCCCAGGAGTTCAGAAACATCATCTCCCATATATGCTGATACAGCATAATAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR TCA 90 bp TTTATTATGCTGTATCAGCATATATGGGAGATGATGTTTCTGAACTCCTGGGGGTTCTATCCCACTTCATaGTTAAAATCACCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: FIMLYQHIWEMMFLNSWGFYPTS*LKSPPS
Trigger: AGAAGGAGGTGATTTTAATCATGAAGTGGGATAGAA...CCCCCAGGAGTTCAGAAACATCATCTCCCATATATGCTGATACAGCATAATAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR GCA 90 bp TTTATTATGCTGTATCAGCATATATGGGAGATGATGTTTCTGAACTCCTGGGGGGCAGCTATCTCATGTTaGTCTTTCTTAAAGACACAA +
Preference number: 4 (lower is better)
Translates to: FIMLYQHIWEMMFLNSWGAAISC*SFLKTQ
Trigger: TTGTGTCTTTAAGAAAGAGCAACATGAGATAGCTGC...CCCCCAGGAGTTCAGAAACATCATCTCCCATATATGCTGATACAGCATAATAAA
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR GCA 90 bp TTTATTATGCTGTATCAGCATATATGGGAGATGATGTTTCTGAACTCCTGGGGGTTGATTCTGTCATTGTaGTGTCAGCTGGTTATTATG +
Preference number: 4 (lower is better)
Translates to: FIMLYQHIWEMMFLNSWGLILSL*CQLVIM
Trigger: CATAATAACCAGCTGACAGCACAATGACAGAATCAA...CCCCCAGGAGTTCAGAAACATCATCTCCCATATATGCTGATACAGCATAATAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR CAA 72 bp CTAAAGATCCTGATGTCTGTGGCATTGAGTCATCTGTaGGTCCATATTGGCATATTTTGTGCATCAAATCAA +
Preference number: 4 (lower is better)
Translates to: LKILMSVALSHL*VHIGIFCASNQ
Trigger: TTGATTTGATGCACAAAATATGCCAATATGGACCAACAGATGACTCAATGCCACAGACATCAGGATCTTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR CAA 72 bp ACCGTAACTCCTTCTGCACAAATTGTGCTTTCAGCTTaGGTGGTAACAAATTTAAACATTCTGCAGTTTTCC +
Preference number: 4 (lower is better)
Translates to: TVTPSAQIVLSA*VVTNLNILQFS
Trigger: GGAAAACTGCAGAATGTTTAAATTTGTTACCACCAAAGCTGAAAGCACAATTTGTGCAGAAGGAGTTACGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp TTTATTATGCTGTATCAGCATATATGGGAGATGATGTTTCTGAACTCCTGGGGGAATCAACTTATTTTCTaGATGTTTTCACTGGGCCAA +
Preference number: 4 (lower is better)
Translates to: FIMLYQHIWEMMFLNSWGNQLIF*MFSLGQ
Trigger: TTGGCCCAGTGAAAACATCCAGAAAATAAGTTGATT...CCCCCAGGAGTTCAGAAACATCATCTCCCATATATGCTGATACAGCATAATAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CCA 90 bp AAAATAATGAACCTCCAGGACCTAAAGATCCTGATGTCTGTGGCATTGAGTCATCTTAGGAGCTTAGTTTaGCTAGATATGAAATTCTTG +
Preference number: 4 (lower is better)
Translates to: KIMNLQDLKILMSVALSHLRSLV*LDMKFL
Trigger: CAAGAATTTCATATCTAGCCAAACTAAGCTCCTAAG...ATGACTCAATGCCACAGACATCAGGATCTTTAGGTCCTGGAGGTTCATTATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR CAA 72 bp GCTTGGTTTATTCTGCTCTTAATACTTTTGATTGCATaGTGGAATTCTTGTATTGCGCTATTCAGCTCTGTC +
Preference number: 4 (lower is better)
Translates to: AWFILLLILLIA*WNSCIALFSSV
Trigger: GACAGAGCTGAATAGCGCAATACAAGAATTCCACAATGCAATCAAAAGTATTAAGAGCAGAATAAACCAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
3UTR CAA 72 bp CTGTGTCACTTTATTGTGATTCTTATTTTTCTTGGATaGGATTTTGCCATCCTCCTGAATTTCCATGATCTT +
Preference number: 4 (lower is better)
Translates to: LCHFIVILIFLG*DFAILLNFHDL
Trigger: AAGATCATGGAAATTCAGGAGGATGGCAAAATCCAATCCAAGAAAAATAAGAATCACAATAAAGTGACACAG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CAA 90 bp TTGATAGTTCTGGCTGGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTTGTCACCTGGAGAGCTaGGTGGGGGTGGCTGCAGGC +
Preference number: 5 (lower is better)
Translates to: LIVLAGGGWKPRPEDLPGCHLES*VGVAAG
Trigger: GCCTGCAGCCACCCCCACCAAGCTCTCCAGGTGACA...ACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACCAGCCAGAACTATCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CAA 90 bp TTGATAGTTCTGGCTGGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTGGGGCCTGTGGGTTGTaGCTGTTAACACCCCTGGAT +
Preference number: 5 (lower is better)
Translates to: LIVLAGGGWKPRPEDLPGGACGL*LLTPLD
Trigger: ATCCAGGGGTGTTAACAGCAACAACCCACAGGCCCC...ACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACCAGCCAGAACTATCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CAA 90 bp GGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAAAGTGGGGCCTGTGGGTaGTTGCTGTTAACACCCCTG +
Preference number: 5 (lower is better)
Translates to: GGGWKPRPEDLPGEKIWESGACG*LLLTPL
Trigger: CAGGGGTGTTAACAGCAACAACCCACAGGCCCCACT...TTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CAA 90 bp GCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTTTCCTCTCCCCCTGAGTGCTCTGGGGAGATCTTaGTGTTTACGTTCCTTCCCC +
Preference number: 5 (lower is better)
Translates to: AAVFPLSAQNVWFPLPLSALGRS*CLRSFP
Trigger: GGGGAAGGAACGTAAACACAAAGATCTCCCCAGAGC...ACTCAGGGGGAGAGGAAACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CAA 90 bp GCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTTTCCTCTCCCCCTGAGTACAGCTGGAAGACTCTaGTTCTGTTGTGTGGCTCCC +
Preference number: 5 (lower is better)
Translates to: AAVFPLSAQNVWFPLPLSTAGRL*FCCVAP
Trigger: GGGAGCCACACAACAGAACAAGAGTCTTCCAGCTGT...ACTCAGGGGGAGAGGAAACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CAA 90 bp GTGTCACCAGTGAAGGCTGTGAAACAGCAAAGACAGTGGCTTGTCCCTTCCTCTGCCCAGCTCTTCCCTTaGAGCTCCTTCTTAGGGAGG +
Preference number: 5 (lower is better)
Translates to: VSPVKAVKQQRQWLVPSSAQLFP*SSFLGR
Trigger: CCTCCCTAAGAAGGAGCTCAAAGGGAAGAGCTGGGC...AGAGGAAGGGACAAGCCACTGTCTTTGCTGTTTCACAGCCTTCACTGGTGACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CAA 90 bp GGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAAACAGCTGGAAGACTCTaGTTCTGTTGTGTGGCTCCC +
Preference number: 5 (lower is better)
Translates to: GGGWKPRPEDLPGEKIWETAGRL*FCCVAP
Trigger: GGGAGCCACACAACAGAACAAGAGTCTTCCAGCTGT...TTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CAA 90 bp GCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTTTCCTCTCCCCCTGAGTCAAATCTGTCAAAGCTaGAAGAACCTCCAGAGCTGG +
Preference number: 5 (lower is better)
Translates to: AAVFPLSAQNVWFPLPLSQICQS*KNLQSW
Trigger: CCAGCTCTGGAGGTTCTTCAAGCTTTGACAGATTTG...ACTCAGGGGGAGAGGAAACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CAA 90 bp GCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTTTCCTCTCCCCCTGAGTAAAAGATTGTGTGGCTaGCCCAGCATCACACACCTT +
Preference number: 5 (lower is better)
Translates to: AAVFPLSAQNVWFPLPLSKRLCG*PSITHL
Trigger: AAGGTGTGTGATGCTGGGCAAGCCACACAATCTTTT...ACTCAGGGGGAGAGGAAACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CAA 90 bp GTGTCACCAGTGAAGGCTGTGAAACAGCAAAGACAGTGGCTTGTCCCTTCCTCTAGGTTGGAGAGCATCTaGGGGACTGTGGAGCTGATA +
Preference number: 5 (lower is better)
Translates to: VSPVKAVKQQRQWLVPSSRLESI*GTVELI
Trigger: TATCAGCTCCACAGTCCCCAAGATGCTCTCCAACCT...AGAGGAAGGGACAAGCCACTGTCTTTGCTGTTTCACAGCCTTCACTGGTGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CAA 90 bp TTGATAGTTCTGGCTGGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTCAAATCTGTCAAAGCTaGAAGAACCTCCAGAGCTGG +
Preference number: 5 (lower is better)
Translates to: LIVLAGGGWKPRPEDLPGQICQS*KNLQSW
Trigger: CCAGCTCTGGAGGTTCTTCAAGCTTTGACAGATTTG...ACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACCAGCCAGAACTATCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CAA 90 bp TTGATAGTTCTGGCTGGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTCAAATCAAGCCTTCTTaGTCCAAAGGCAGTAGGCAG +
Preference number: 5 (lower is better)
Translates to: LIVLAGGGWKPRPEDLPGQIKPS*SKGSRQ
Trigger: CTGCCTACTGCCTTTGGACAAAGAAGGCTTGATTTG...ACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACCAGCCAGAACTATCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CAA 90 bp GCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTTTCCTCTCCCCCTGAGTGCAGGAACCATATCCTaGTTTCTATCCCACTTCATG +
Preference number: 5 (lower is better)
Translates to: AAVFPLSAQNVWFPLPLSAGTIS*FLSHFM
Trigger: CATGAAGTGGGATAGAAACAAGGATATGGTTCCTGC...ACTCAGGGGGAGAGGAAACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CAA 90 bp GCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTTTCCTCTCCCCCTGAGTTATGTTTCCTCACATTaGCAGCTGTGTTCCCTCTCA +
Preference number: 5 (lower is better)
Translates to: AAVFPLSAQNVWFPLPLSYVSSH*QLCSLS
Trigger: TGAGAGGGAACACAGCTGCAAATGTGAGGAAACATA...ACTCAGGGGGAGAGGAAACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CAA 90 bp GCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTTTCCTCTCCCCCTGAGTTCCTCTCTAGCAAGGTaGGGGATATTTTCATGGACA +
Preference number: 5 (lower is better)
Translates to: AAVFPLSAQNVWFPLPLSSSLAR*GIFSWT
Trigger: TGTCCATGAAAATATCCCCAACCTTGCTAGAGAGGA...ACTCAGGGGGAGAGGAAACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CAA 90 bp GGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAACAGATAGCTGTCCAGTaGTTTTCTGTGGGTGATGAG +
Preference number: 5 (lower is better)
Translates to: GGGWKPRPEDLPGEKIWEQIAVQ*FSVGDE
Trigger: CTCATCACCCACAGAAAACAACTGGACAGCTATCTG...TTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CAA 90 bp GGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAAGCAGGAACCATATCCTaGTTTCTATCCCACTTCATG +
Preference number: 5 (lower is better)
Translates to: GGGWKPRPEDLPGEKIWEAGTIS*FLSHFM
Trigger: CATGAAGTGGGATAGAAACAAGGATATGGTTCCTGC...TTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CAA 90 bp TTGATAGTTCTGGCTGGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTCTCCTTCCCTTTATTTaGAGCCTGTGTGTGTCTTAC +
Preference number: 5 (lower is better)
Translates to: LIVLAGGGWKPRPEDLPGLLPFI*SLCVSY
Trigger: GTAAGACACACACAGGCTCAAAATAAAGGGAAGGAG...ACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACCAGCCAGAACTATCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CAA 90 bp GTGTCACCAGTGAAGGCTGTGAAACAGCAAAGACAGTGGCTTGTCCCTTCCTCTCTTGTCTTCACTGTGTaGCTGCAGCTCCTTAACTGG +
Preference number: 5 (lower is better)
Translates to: VSPVKAVKQQRQWLVPSSLVFTV*LQLLNW
Trigger: CCAGTTAAGGAGCTGCAGCAACACAGTGAAGACAAG...AGAGGAAGGGACAAGCCACTGTCTTTGCTGTTTCACAGCCTTCACTGGTGACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CAA 90 bp CCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAATGGAAACCCACGAAACTGTTCCTGTAAGAGGTaGGAGAGCATCTTGGGGACT +
Preference number: 5 (lower is better)
Translates to: PGLKIFLVRRYGNGNPRNCSCKR*ESILGT
Trigger: AGTCCCCAAGATGCTCTCCAACCTCTTACAGGAACA...GTTTCGTGGGTTTCCATTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CAA 90 bp TTGATAGTTCTGGCTGGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTTTAAAGCAACACTTCTaGTGCTTGGAGTGGGTATCT +
Preference number: 5 (lower is better)
Translates to: LIVLAGGGWKPRPEDLPGLKQHF*CLEWVS
Trigger: AGATACCCACTCCAAGCACAAGAAGTGTTGCTTTAA...ACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACCAGCCAGAACTATCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641850.1
CDS-3UTR CAA 90 bp TTCTCCCTCTGTGAGTGCCATCTCAGGGATAATTCAAATCTTTGTCACCTGGAGTTCTGGTCAGCCATCTaGCCCACTCCTCCACTTCTC +
Preference number: 5 (lower is better)
Translates to: FSLCECHLRDNSNLCHLEFWSAI*PTPPLL
Trigger: GAGAAGTGGAGGAGTGGGCAAGATGGCTGACCAGAA...CTCCAGGTGACAAAGATTTGAATTATCCCTGAGATGGCACTCACAGAGGGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CAA 90 bp GTGTCACCAGTGAAGGCTGTGAAACAGCAAAGACAGTGGCTTGTCCCTTCCTCTATAGTCTGGCTATGTTaGGGTAGAGCAGCTGTGTTG +
Preference number: 5 (lower is better)
Translates to: VSPVKAVKQQRQWLVPSSIVWLC*GRAAVL
Trigger: CAACACAGCTGCTCTACCCAAACATAGCCAGACTAT...AGAGGAAGGGACAAGCCACTGTCTTTGCTGTTTCACAGCCTTCACTGGTGACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CAA 90 bp TATGTTTCCTCACATTTGCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTCAGTCTGGCCACGTTTaGGTAGAACAGCTGTGCTGT +
Preference number: 5 (lower is better)
Translates to: YVSSHLQLCSLSVLRTCGQSGHV*VEQLCC
Trigger: ACAGCACAGCTGTTCTACCAAAACGTGGCCAGACTG...ACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGCAAATGTGAGGAAACATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CAA 90 bp TTCTCCCTCTGTGAGTGCCATCTCAGGGATAATTCAAATCTTTGTCACCTGGAGCTTCCTCTGAGAGCTTaGTCCCAGGGAGGTATGCAG +
Preference number: 5 (lower is better)
Translates to: FSLCECHLRDNSNLCHLELPLRA*SQGGMQ
Trigger: CTGCATACCTCCCTGGGACAAAGCTCTCAGAGGAAG...CTCCAGGTGACAAAGATTTGAATTATCCCTGAGATGGCACTCACAGAGGGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CAA 90 bp GCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTTTCCTCTCCCCCTGAGTCTCACTTCTTATCTCTaGTTTCAGAGGGGGATATAT +
Preference number: 5 (lower is better)
Translates to: AAVFPLSAQNVWFPLPLSLTSYL*FQRGIY
Trigger: ATATATCCCCCTCTGAAACAAGAGATAAGAAGTGAG...ACTCAGGGGGAGAGGAAACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CAA 90 bp GGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAATTTACGCCAGGCAGTTaGGACAAGGAGAAAATTTTT +
Preference number: 5 (lower is better)
Translates to: GGGWKPRPEDLPGEKIWEFTPGS*DKEKIF
Trigger: AAAAATTTTCTCCTTGTCCAAACTGCCTGGCGTAAA...TTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CAA 90 bp TTTATTATGCTGTATCAGCATATATGGGAGATGATGTTTCTGAACTCCTGGGGGCCAGCATCACACACCTaGGGGGTGGCAGAGCCTGAA +
Preference number: 5 (lower is better)
Translates to: FIMLYQHIWEMMFLNSWGPASHT*GVAEPE
Trigger: TTCAGGCTCTGCCACCCCCAAGGTGTGTGATGCTGG...CCCCCAGGAGTTCAGAAACATCATCTCCCATATATGCTGATACAGCATAATAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CAA 90 bp CCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAATGGAAACCCACGAAACAAAAGATTGTGTGGCTaGCCCAGCATCACACACCTT +
Preference number: 5 (lower is better)
Translates to: PGLKIFLVRRYGNGNPRNKRLCG*PSITHL
Trigger: AAGGTGTGTGATGCTGGGCAAGCCACACAATCTTTT...GTTTCGTGGGTTTCCATTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CAA 90 bp TTCTCCCTCTGTGAGTGCCATCTCAGGGATAATTCAAATCTTTGTCACCTGGAGAGCAAAGACAGTGGCTaGTCCCTTCCTCTGAGAGCT +
Preference number: 5 (lower is better)
Translates to: FSLCECHLRDNSNLCHLESKDSG*SLPLRA
Trigger: AGCTCTCAGAGGAAGGGACAAGCCACTGTCTTTGCT...CTCCAGGTGACAAAGATTTGAATTATCCCTGAGATGGCACTCACAGAGGGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CAA 90 bp TTCTCCCTCTGTGAGTGCCATCTCAGGGATAATTCAAATCTTTGTCACCTGGAGGCTCTGGGGAGATCTTaGTGTTTACGTTCCTTCCCC +
Preference number: 5 (lower is better)
Translates to: FSLCECHLRDNSNLCHLEALGRS*CLRSFP
Trigger: GGGGAAGGAACGTAAACACAAAGATCTCCCCAGAGC...CTCCAGGTGACAAAGATTTGAATTATCCCTGAGATGGCACTCACAGAGGGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CAA 90 bp GGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAACTCACTTCTTATCTCTaGTTTCAGAGGGGGATATAT +
Preference number: 5 (lower is better)
Translates to: GGGWKPRPEDLPGEKIWELTSYL*FQRGIY
Trigger: ATATATCCCCCTCTGAAACAAGAGATAAGAAGTGAG...TTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CAA 90 bp GCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTTTCCTCTCCCCCTGAGTGATTGTTTCCTCAGCTaGGTTTATTCTGCTCTTAAT +
Preference number: 5 (lower is better)
Translates to: AAVFPLSAQNVWFPLPLSDCFLS*VYSALN
Trigger: ATTAAGAGCAGAATAAACCAAGCTGAGGAAACAATC...ACTCAGGGGGAGAGGAAACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CAA 90 bp GCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTTTCCTCTCCCCCTGAGTCAATTACTTGTAGATTaGGCCTGTTTACATAACCCA +
Preference number: 5 (lower is better)
Translates to: AAVFPLSAQNVWFPLPLSQLLVD*ACLHNP
Trigger: TGGGTTATGTAAACAGGCCAAATCTACAAGTAATTG...ACTCAGGGGGAGAGGAAACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CAA 90 bp TTGATAGTTCTGGCTGGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTCATTTGATTCTGTCATaGTGCTGTCAGCTGGTTATT +
Preference number: 5 (lower is better)
Translates to: LIVLAGGGWKPRPEDLPGHLILS*CCQLVI
Trigger: AATAACCAGCTGACAGCACAATGACAGAATCAAATG...ACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACCAGCCAGAACTATCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CAA 90 bp GGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAACTGATATGTGTGCATTaGATTCTGTCATTGTGCTGT +
Preference number: 5 (lower is better)
Translates to: GGGWKPRPEDLPGEKIWELICVH*ILSLCC
Trigger: ACAGCACAATGACAGAATCAAATGCACACATATCAG...TTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CAA 90 bp TATGTTTCCTCACATTTGCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTTGTGAGACGGGTCTCTaGAAGACAGCATACCATTGG +
Preference number: 5 (lower is better)
Translates to: YVSSHLQLCSLSVLRTCGCETGL*KTAYHW
Trigger: CCAATGGTATGCTGTCTTCAAGAGACCCGTCTCACA...ACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGCAAATGTGAGGAAACATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CAA 90 bp CCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAATGGAAACCCACGAAACCAGATAGCTGTCCAGTaGTTTTCTGTGGGTGATGAG +
Preference number: 5 (lower is better)
Translates to: PGLKIFLVRRYGNGNPRNQIAVQ*FSVGDE
Trigger: CTCATCACCCACAGAAAACAACTGGACAGCTATCTG...GTTTCGTGGGTTTCCATTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CAA 90 bp TTTTCCAAATTTGTCCCTGGACCTTCCCTCAAGATGGGCTTAGCTAGACTACATAGGTTGGAGAGCATCTaGGGGACTGTGGAGCTGATA +
Preference number: 5 (lower is better)
Translates to: FSKFVPGPSLKMGLARLHRLESI*GTVELI
Trigger: TATCAGCTCCACAGTCCCCAAGATGCTCTCCAACCT...ATGTAGTCTAGCTAAGCCCATCTTGAGGGAAGGTCCAGGGACAAATTTGGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CAA 90 bp TTCTCCCTCTGTGAGTGCCATCTCAGGGATAATTCAAATCTTTGTCACCTGGAGCAGGTGTTGAATGCCTaGGACCTGCCTTTAGCTGAA +
Preference number: 5 (lower is better)
Translates to: FSLCECHLRDNSNLCHLEQVLNA*DLPLAE
Trigger: TTCAGCTAAAGGCAGGTCCAAGGCATTCAACACCTG...CTCCAGGTGACAAAGATTTGAATTATCCCTGAGATGGCACTCACAGAGGGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CAA 90 bp CCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAATGGAAACCCACGAAACGCTCAGTGCTCCTTGTaGACATTTGATAAGCTAGAG +
Preference number: 5 (lower is better)
Translates to: PGLKIFLVRRYGNGNPRNAQCSL*TFDKLE
Trigger: CTCTAGCTTATCAAATGTCAACAAGGAGCACTGAGC...GTTTCGTGGGTTTCCATTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641850.1
CDS-3UTR CAA 90 bp TTGATAGTTCTGGCTGGTGGTGGCTGGAAGCCCAGGCCTGAAGATCTTCCTGGTGTTAGCTTGTCTAGGTaGAGCTTGACTGAAATATAT +
Preference number: 5 (lower is better)
Translates to: LIVLAGGGWKPRPEDLPGVSLSR*SLTEIY
Trigger: ATATATTTCAGTCAAGCTCAACCTAGACAAGCTAAC...ACCAGGAAGATCTTCAGGCCTGGGCTTCCAGCCACCACCAGCCAGAACTATCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CAA 90 bp GTGTCACCAGTGAAGGCTGTGAAACAGCAAAGACAGTGGCTTGTCCCTTCCTCTAGAAGGGAGGAGGCTTaGATATCTGCAATGTTAGTT +
Preference number: 5 (lower is better)
Translates to: VSPVKAVKQQRQWLVPSSRREEA*ISAMLV
Trigger: AACTAACATTGCAGATATCAAAGCCTCCTCCCTTCT...AGAGGAAGGGACAAGCCACTGTCTTTGCTGTTTCACAGCCTTCACTGGTGACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CAA 90 bp AAAATAATGAACCTCCAGGACCTAAAGATCCTGATGTCTGTGGCATTGAGTCATGGGGCCTGTGGGTTGTaGCTGTTAACACCCCTGGAT +
Preference number: 5 (lower is better)
Translates to: KIMNLQDLKILMSVALSHGACGL*LLTPLD
Trigger: ATCCAGGGGTGTTAACAGCAACAACCCACAGGCCCC...ATGACTCAATGCCACAGACATCAGGATCTTTAGGTCCTGGAGGTTCATTATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CAA 90 bp TTTATTATGCTGTATCAGCATATATGGGAGATGATGTTTCTGAACTCCTGGGGGAGTGGGGCCTGTGGGTaGTTGCTGTTAACACCCCTG +
Preference number: 5 (lower is better)
Translates to: FIMLYQHIWEMMFLNSWGSGACG*LLLTPL
Trigger: CAGGGGTGTTAACAGCAACAACCCACAGGCCCCACT...CCCCCAGGAGTTCAGAAACATCATCTCCCATATATGCTGATACAGCATAATAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CAA 90 bp AAAATAATGAACCTCCAGGACCTAAAGATCCTGATGTCTGTGGCATTGAGTCATGCCCAGCTCTTCCCTTaGAGCTCCTTCTTAGGGAGG +
Preference number: 5 (lower is better)
Translates to: KIMNLQDLKILMSVALSHAQLFP*SSFLGR
Trigger: CCTCCCTAAGAAGGAGCTCAAAGGGAAGAGCTGGGC...ATGACTCAATGCCACAGACATCAGGATCTTTAGGTCCTGGAGGTTCATTATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CAA 90 bp TTCTCCCTCTGTGAGTGCCATCTCAGGGATAATTCAAATCTTTGTCACCTGGAGTGTGAGACGGGTCTCTaGAAGACAGCATACCATTGG +
Preference number: 5 (lower is better)
Translates to: FSLCECHLRDNSNLCHLECETGL*KTAYHW
Trigger: CCAATGGTATGCTGTCTTCAAGAGACCCGTCTCACA...CTCCAGGTGACAAAGATTTGAATTATCCCTGAGATGGCACTCACAGAGGGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CAA 90 bp TTTTCCAAATTTGTCCCTGGACCTTCCCTCAAGATGGGCTTAGCTAGACTACATTGTTCCTGTAAGAGGTaGGAGAGCATCTTGGGGACT +
Preference number: 5 (lower is better)
Translates to: FSKFVPGPSLKMGLARLHCSCKR*ESILGT
Trigger: AGTCCCCAAGATGCTCTCCAACCTCTTACAGGAACA...ATGTAGTCTAGCTAAGCCCATCTTGAGGGAAGGTCCAGGGACAAATTTGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CAA 90 bp TTCTCCCTCTGTGAGTGCCATCTCAGGGATAATTCAAATCTTTGTCACCTGGAGCAAATCAAGCCTTCTTaGTCCAAAGGCAGTAGGCAG +
Preference number: 5 (lower is better)
Translates to: FSLCECHLRDNSNLCHLEQIKPS*SKGSRQ
Trigger: CTGCCTACTGCCTTTGGACAAAGAAGGCTTGATTTG...CTCCAGGTGACAAAGATTTGAATTATCCCTGAGATGGCACTCACAGAGGGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CAA 90 bp AAAATAATGAACCTCCAGGACCTAAAGATCCTGATGTCTGTGGCATTGAGTCATCTTCCTCTGAGAGCTTaGTCCCAGGGAGGTATGCAG +
Preference number: 5 (lower is better)
Translates to: KIMNLQDLKILMSVALSHLPLRA*SQGGMQ
Trigger: CTGCATACCTCCCTGGGACAAAGCTCTCAGAGGAAG...ATGACTCAATGCCACAGACATCAGGATCTTTAGGTCCTGGAGGTTCATTATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CAA 90 bp TATGTTTCCTCACATTTGCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTAACACGTTCATTCACTaGTCTTCACTGTGTTGCTGC +
Preference number: 5 (lower is better)
Translates to: YVSSHLQLCSLSVLRTCGNTFIH*SSLCCC
Trigger: GCAGCAACACAGTGAAGACAAGTGAATGAACGTGTT...ACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGCAAATGTGAGGAAACATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CAA 90 bp CCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAATGGAAACCCACGAAACAGAATTACATGGATATaGAGACGGTACAGAATCCAC +
Preference number: 5 (lower is better)
Translates to: PGLKIFLVRRYGNGNPRNRITWI*RRYRIH
Trigger: GTGGATTCTGTACCGTCTCAATATCCATGTAATTCT...GTTTCGTGGGTTTCCATTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CAA 90 bp TTCTCCCTCTGTGAGTGCCATCTCAGGGATAATTCAAATCTTTGTCACCTGGAGGGTCAGTTTGCAAAGTaGTGCAGGGTACAAAATCAG +
Preference number: 5 (lower is better)
Translates to: FSLCECHLRDNSNLCHLEGQFAK*CRVQNQ
Trigger: CTGATTTTGTACCCTGCACAACTTTGCAAACTGACC...CTCCAGGTGACAAAGATTTGAATTATCCCTGAGATGGCACTCACAGAGGGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641850.1
CDS-3UTR CAA 90 bp GTGTCACCAGTGAAGGCTGTGAAACAGCAAAGACAGTGGCTTGTCCCTTCCTCTATCTGTTGGTCCATATaGGCATATTTTGTGCATCAA +
Preference number: 5 (lower is better)
Translates to: VSPVKAVKQQRQWLVPSSICWSI*AYFVHQ
Trigger: TTGATGCACAAAATATGCCAATATGGACCAACAGAT...AGAGGAAGGGACAAGCCACTGTCTTTGCTGTTTCACAGCCTTCACTGGTGACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CAA 90 bp CCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAATGGAAACCCACGAAACTGCAGCTATCTCATGTaGCTCTTTCTTAAAGACACA +
Preference number: 5 (lower is better)
Translates to: PGLKIFLVRRYGNGNPRNCSYLM*LFLKDT
Trigger: TGTGTCTTTAAGAAAGAGCAACATGAGATAGCTGCA...GTTTCGTGGGTTTCCATTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CAA 90 bp TTTTCCAAATTTGTCCCTGGACCTTCCCTCAAGATGGGCTTAGCTAGACTACATAGGATTAGGAACCACTaGAAAAAGCAGTCTGGCCAC +
Preference number: 5 (lower is better)
Translates to: FSKFVPGPSLKMGLARLHRIRNH*KKQSGH
Trigger: GTGGCCAGACTGCTTTTTCAAGTGGTTCCTAATCCT...ATGTAGTCTAGCTAAGCCCATCTTGAGGGAAGGTCCAGGGACAAATTTGGAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CAA 90 bp TTTATTATGCTGTATCAGCATATATGGGAGATGATGTTTCTGAACTCCTGGGGGAGCAAAGACAGTGGCTaGTCCCTTCCTCTGAGAGCT +
Preference number: 5 (lower is better)
Translates to: FIMLYQHIWEMMFLNSWGSKDSG*SLPLRA
Trigger: AGCTCTCAGAGGAAGGGACAAGCCACTGTCTTTGCT...CCCCCAGGAGTTCAGAAACATCATCTCCCATATATGCTGATACAGCATAATAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CAA 90 bp TTCTCCCTCTGTGAGTGCCATCTCAGGGATAATTCAAATCTTTGTCACCTGGAGAAGACTCTTGTTCTGTaGTGTGGCTCCCCTATGTTT +
Preference number: 5 (lower is better)
Translates to: FSLCECHLRDNSNLCHLEKTLVL*CGSPMF
Trigger: AAACATAGGGGAGCCACACAACAGAACAAGAGTCTT...CTCCAGGTGACAAAGATTTGAATTATCCCTGAGATGGCACTCACAGAGGGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CAA 90 bp CCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAATGGAAACCCACGAAACCTTATTTTTCTTGGATaGGATTTTGCCATCCTCCTG +
Preference number: 5 (lower is better)
Translates to: PGLKIFLVRRYGNGNPRNLIFLG*DFAILL
Trigger: CAGGAGGATGGCAAAATCCAATCCAAGAAAAATAAG...GTTTCGTGGGTTTCCATTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CAA 90 bp GTGTCACCAGTGAAGGCTGTGAAACAGCAAAGACAGTGGCTTGTCCCTTCCTCTCATAACCCATACTTCTaGGAGGCTTTGTTTATTTCT +
Preference number: 5 (lower is better)
Translates to: VSPVKAVKQQRQWLVPSSHNPYF*EALFIS
Trigger: AGAAATAAACAAAGCCTCCAAGAAGTATGGGTTATG...AGAGGAAGGGACAAGCCACTGTCTTTGCTGTTTCACAGCCTTCACTGGTGACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CAA 90 bp GTGTCACCAGTGAAGGCTGTGAAACAGCAAAGACAGTGGCTTGTCCCTTCCTCTCAATTACTTGTAGATTaGGCCTGTTTACATAACCCA +
Preference number: 5 (lower is better)
Translates to: VSPVKAVKQQRQWLVPSSQLLVD*ACLHNP
Trigger: TGGGTTATGTAAACAGGCCAAATCTACAAGTAATTG...AGAGGAAGGGACAAGCCACTGTCTTTGCTGTTTCACAGCCTTCACTGGTGACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CAA 90 bp CCAGGCCTGAAGATCTTCCTGGTGAGAAGATATGGGAATGGAAACCCACGAAACCTGTATTTACTGAATTaGACTGTTGTCCTCTCTAGC +
Preference number: 5 (lower is better)
Translates to: PGLKIFLVRRYGNGNPRNLYLLN*TVVLSS
Trigger: GCTAGAGAGGACAACAGTCAAATTCAGTAAATACAG...GTTTCGTGGGTTTCCATTCCCATATCTTCTCACCAGGAAGATCTTCAGGCCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CAA 90 bp TTTTCCAAATTTGTCCCTGGACCTTCCCTCAAGATGGGCTTAGCTAGACTACATTATGTTTCCTCACATTaGCAGCTGTGTTCCCTCTCA +
Preference number: 5 (lower is better)
Translates to: FSKFVPGPSLKMGLARLHYVSSH*QLCSLS
Trigger: TGAGAGGGAACACAGCTGCAAATGTGAGGAAACATA...ATGTAGTCTAGCTAAGCCCATCTTGAGGGAAGGTCCAGGGACAAATTTGGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CAA 90 bp TATGTTTCCTCACATTTGCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTTACTTGTTTGTGTGGTaGCTTCATAGTGACATTGGT +
Preference number: 5 (lower is better)
Translates to: YVSSHLQLCSLSVLRTCGYLFVW*LHSDIG
Trigger: ACCAATGTCACTATGAAGCAACCACACAAACAAGTA...ACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGCAAATGTGAGGAAACATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CAA 90 bp TTTTCCAAATTTGTCCCTGGACCTTCCCTCAAGATGGGCTTAGCTAGACTACATCTCCTTCCCTTTATTTaGAGCCTGTGTGTGTCTTAC +
Preference number: 5 (lower is better)
Translates to: FSKFVPGPSLKMGLARLHLLPFI*SLCVSY
Trigger: GTAAGACACACACAGGCTCAAAATAAAGGGAAGGAG...ATGTAGTCTAGCTAAGCCCATCTTGAGGGAAGGTCCAGGGACAAATTTGGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CAA 90 bp TTTTCCAAATTTGTCCCTGGACCTTCCCTCAAGATGGGCTTAGCTAGACTACATAACACGTTCATTCACTaGTCTTCACTGTGTTGCTGC +
Preference number: 5 (lower is better)
Translates to: FSKFVPGPSLKMGLARLHNTFIH*SSLCCC
Trigger: GCAGCAACACAGTGAAGACAAGTGAATGAACGTGTT...ATGTAGTCTAGCTAAGCCCATCTTGAGGGAAGGTCCAGGGACAAATTTGGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CAA 90 bp TATGTTTCCTCACATTTGCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTAGCAAAAGAACCCAATaGTGTGTAGATAACACATGG +
Preference number: 5 (lower is better)
Translates to: YVSSHLQLCSLSVLRTCGSKRTQ*CVDNTW
Trigger: CCATGTGTTATCTACACACAATTGGGTTCTTTTGCT...ACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGCAAATGTGAGGAAACATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CAA 90 bp TTCTCCCTCTGTGAGTGCCATCTCAGGGATAATTCAAATCTTTGTCACCTGGAGAGAATTACATGGATATaGAGACGGTACAGAATCCAC +
Preference number: 5 (lower is better)
Translates to: FSLCECHLRDNSNLCHLERITWI*RRYRIH
Trigger: GTGGATTCTGTACCGTCTCAATATCCATGTAATTCT...CTCCAGGTGACAAAGATTTGAATTATCCCTGAGATGGCACTCACAGAGGGAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CAA 90 bp AAAATAATGAACCTCCAGGACCTAAAGATCCTGATGTCTGTGGCATTGAGTCATTCTCTGATATCTGTGTaGCCCAGGACAGTGTCTTCA +
Preference number: 5 (lower is better)
Translates to: KIMNLQDLKILMSVALSHSLISV*PRTVSS
Trigger: TGAAGACACTGTCCTGGGCAACACAGATATCAGAGA...ATGACTCAATGCCACAGACATCAGGATCTTTAGGTCCTGGAGGTTCATTATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641850.1
CDS-3UTR CAA 90 bp TTTATTATGCTGTATCAGCATATATGGGAGATGATGTTTCTGAACTCCTGGGGGAAGGACATGGTCAGTTaGCAAAGTTGTGCAGGGTAC +
Preference number: 5 (lower is better)
Translates to: FIMLYQHIWEMMFLNSWGKDMVS*QSCAGY
Trigger: GTACCCTGCACAACTTTGCAAACTGACCATGTCCTT...CCCCCAGGAGTTCAGAAACATCATCTCCCATATATGCTGATACAGCATAATAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641850.1
CDS-3UTR CAA 90 bp TTTATTATGCTGTATCAGCATATATGGGAGATGATGTTTCTGAACTCCTGGGGGCTGATGTCTGTGGCATaGAGTCATCTGTTGGTCCAT +
Preference number: 5 (lower is better)
Translates to: FIMLYQHIWEMMFLNSWGLMSVA*SHLLVH
Trigger: ATGGACCAACAGATGACTCAATGCCACAGACATCAG...CCCCCAGGAGTTCAGAAACATCATCTCCCATATATGCTGATACAGCATAATAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CAA 90 bp TATGTTTCCTCACATTTGCAGCTGTGTTCCCTCTCAGTGCTCAGAACGTGTGGTTTGTCTAGGTTGAGCTaGACTGAAATATATTTGACC +
Preference number: 5 (lower is better)
Translates to: YVSSHLQLCSLSVLRTCGLSRLS*TEIYLT
Trigger: GGTCAAATATATTTCAGTCAAGCTCAACCTAGACAA...ACCACACGTTCTGAGCACTGAGAGGGAACACAGCTGCAAATGTGAGGAAACATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CAA 90 bp TTTTCCAAATTTGTCCCTGGACCTTCCCTCAAGATGGGCTTAGCTAGACTACATTGCATTGTGGAATTCTaGTATTGCGCTATTCAGCTC +
Preference number: 5 (lower is better)
Translates to: FSKFVPGPSLKMGLARLHCIVEF*YCAIQL
Trigger: GAGCTGAATAGCGCAATACAAGAATTCCACAATGCA...ATGTAGTCTAGCTAAGCCCATCTTGAGGGAAGGTCCAGGGACAAATTTGGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CAA 90 bp TTCTCCCTCTGTGAGTGCCATCTCAGGGATAATTCAAATCTTTGTCACCTGGAGTACTTGTTTGTGTGGTaGCTTCATAGTGACATTGGT +
Preference number: 5 (lower is better)
Translates to: FSLCECHLRDNSNLCHLEYLFVW*LHSDIG
Trigger: ACCAATGTCACTATGAAGCAACCACACAAACAAGTA...CTCCAGGTGACAAAGATTTGAATTATCCCTGAGATGGCACTCACAGAGGGAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CAA 90 bp TTTTCCAAATTTGTCCCTGGACCTTCCCTCAAGATGGGCTTAGCTAGACTACATGACTCAGTGTGTCTCTaGCTATTCAGAGATCATAAA +
Preference number: 5 (lower is better)
Translates to: FSKFVPGPSLKMGLARLHDSVCL*LFRDHK
Trigger: TTTATGATCTCTGAATAGCAAGAGACACACTGAGTC...ATGTAGTCTAGCTAAGCCCATCTTGAGGGAAGGTCCAGGGACAAATTTGGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641850.1
CDS-3UTR CAA 90 bp TTCTCCCTCTGTGAGTGCCATCTCAGGGATAATTCAAATCTTTGTCACCTGGAGTTGTCTAGGTTGAGCTaGACTGAAATATATTTGACC +
Preference number: 5 (lower is better)
Translates to: FSLCECHLRDNSNLCHLELSRLS*TEIYLT
Trigger: GGTCAAATATATTTCAGTCAAGCTCAACCTAGACAA...CTCCAGGTGACAAAGATTTGAATTATCCCTGAGATGGCACTCACAGAGGGAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CAA 90 bp AAAATAATGAACCTCCAGGACCTAAAGATCCTGATGTCTGTGGCATTGAGTCATAAGACTCTTGTTCTGTaGTGTGGCTCCCCTATGTTT +
Preference number: 5 (lower is better)
Translates to: KIMNLQDLKILMSVALSHKTLVL*CGSPMF
Trigger: AAACATAGGGGAGCCACACAACAGAACAAGAGTCTT...ATGACTCAATGCCACAGACATCAGGATCTTTAGGTCCTGGAGGTTCATTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CAA 90 bp TTCTCCCTCTGTGAGTGCCATCTCAGGGATAATTCAAATCTTTGTCACCTGGAGGATTGTTTCCTCAGCTaGGTTTATTCTGCTCTTAAT +
Preference number: 5 (lower is better)
Translates to: FSLCECHLRDNSNLCHLEDCFLS*VYSALN
Trigger: ATTAAGAGCAGAATAAACCAAGCTGAGGAAACAATC...CTCCAGGTGACAAAGATTTGAATTATCCCTGAGATGGCACTCACAGAGGGAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CAA 90 bp TTTTCCAAATTTGTCCCTGGACCTTCCCTCAAGATGGGCTTAGCTAGACTACATCATCAAGTTCTGAGATaGTTTCCTCAGCTTGGTTTA +
Preference number: 5 (lower is better)
Translates to: FSKFVPGPSLKMGLARLHHQVLR*FPQLGL
Trigger: TAAACCAAGCTGAGGAAACAATCTCAGAACTTGATG...ATGTAGTCTAGCTAAGCCCATCTTGAGGGAAGGTCCAGGGACAAATTTGGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CAA 90 bp TTTATTATGCTGTATCAGCATATATGGGAGATGATGTTTCTGAACTCCTGGGGGTCCTCTCTAGCAAGGTaGGGGATATTTTCATGGACA +
Preference number: 5 (lower is better)
Translates to: FIMLYQHIWEMMFLNSWGSSLAR*GIFSWT
Trigger: TGTCCATGAAAATATCCCCAACCTTGCTAGAGAGGA...CCCCCAGGAGTTCAGAAACATCATCTCCCATATATGCTGATACAGCATAATAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CAA 90 bp TTTATTATGCTGTATCAGCATATATGGGAGATGATGTTTCTGAACTCCTGGGGGAAGAAGACAGGGTTCTaGCCAAAGGTTGAAATTGCT +
Preference number: 5 (lower is better)
Translates to: FIMLYQHIWEMMFLNSWGKKTGF*PKVEIA
Trigger: AGCAATTTCAACCTTTGGCAAGAACCCTGTCTTCTT...CCCCCAGGAGTTCAGAAACATCATCTCCCATATATGCTGATACAGCATAATAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CAA 90 bp AAAATAATGAACCTCCAGGACCTAAAGATCCTGATGTCTGTGGCATTGAGTCATTTGGCTCAGTGCTCCTaGTTGACATTTGATAAGCTA +
Preference number: 5 (lower is better)
Translates to: KIMNLQDLKILMSVALSHLAQCS*LTFDKL
Trigger: TAGCTTATCAAATGTCAACAAGGAGCACTGAGCCAA...ATGACTCAATGCCACAGACATCAGGATCTTTAGGTCCTGGAGGTTCATTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641850.1
CDS-3UTR CAA 90 bp AAAATAATGAACCTCCAGGACCTAAAGATCCTGATGTCTGTGGCATTGAGTCATCCACAGTATCAGATGTaGCTATTGGCTGTGAACTTT +
Preference number: 5 (lower is better)
Translates to: KIMNLQDLKILMSVALSHPQYQM*LLAVNF
Trigger: AAAGTTCACAGCCAATAGCAACATCTGATACTGTGG...ATGACTCAATGCCACAGACATCAGGATCTTTAGGTCCTGGAGGTTCATTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS TCA 90 bp GTCTTCAGATCCCAGGGTCTCCAAAAATTACAACAGAGAGCAATTTaGAGTATTTCAGAAGTTCTAACAGCCTTATATAGGAGTACTCCG +
Preference number: 5 (lower is better)
Translates to: VFRSQGLQKLQQRAI*SISEVLTALYRSTP
Trigger: CGGAGTACTCCTATATAAGGCTGTTAGAACTTCTGAAATACTTCAAATTGCTCTCTGTTGTAATTTTTGGAGACCCTGGGATCTGAAGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641850.1
CDS CCA 90 bp GACCATAAACTCTGTTCCATGTGTATCCTTACTGGAAGAATTACATaGATATTGAGACGGTACAGAATCCACTGTTCTAAGTCTTGTCCT +
Preference number: 5 (lower is better)
Translates to: DHKLCSMCILTGRIT*ILRRYRIHCSKSCP
Trigger: AGGACAAGACTTAGAACAGTGGATTCTGTACCGTCTCAATATCCATGTAATTCTTCCAGTAAGGATACACATGGAACAGAGTTTATGGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS CCA 90 bp GAAGATTACAAAGAATATTTAAAGCAACACTTCTTGTGCTTGGAGTaGGTATCTCTGATATCTGTGTTGCCCAGGACAGTGTCTTCAGAT +
Preference number: 5 (lower is better)
Translates to: EDYKEYLKQHFLCLE*VSLISVLPRTVSSD
Trigger: ATCTGAAGACACTGTCCTGGGCAACACAGATATCAGAGATACCCACTCCAAGCACAAGAAGTGTTGCTTTAAATATTCTTTGTAATCTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641850.1
CDS-3UTR CAA 90 bp AAAATAATGAACCTCCAGGACCTAAAGATCCTGATGTCTGTGGCATTGAGTCATGCATTGAGTCATCTGTaGGTCCATATTGGCATATTT +
Preference number: 5 (lower is better)
Translates to: KIMNLQDLKILMSVALSHALSHL*VHIGIF
Trigger: AAATATGCCAATATGGACCAACAGATGACTCAATGC...ATGACTCAATGCCACAGACATCAGGATCTTTAGGTCCTGGAGGTTCATTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CAA 90 bp AAAATAATGAACCTCCAGGACCTAAAGATCCTGATGTCTGTGGCATTGAGTCATTTTACGCCAGGCAGTTaGGACAAGGAGAAAATTTTT +
Preference number: 5 (lower is better)
Translates to: KIMNLQDLKILMSVALSHFTPGS*DKEKIF
Trigger: AAAAATTTTCTCCTTGTCCAAACTGCCTGGCGTAAA...ATGACTCAATGCCACAGACATCAGGATCTTTAGGTCCTGGAGGTTCATTATTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CAA 90 bp TTTATTATGCTGTATCAGCATATATGGGAGATGATGTTTCTGAACTCCTGGGGGCTTATTTTTCTTGGATaGGATTTTGCCATCCTCCTG +
Preference number: 5 (lower is better)
Translates to: FIMLYQHIWEMMFLNSWGLIFLG*DFAILL
Trigger: CAGGAGGATGGCAAAATCCAATCCAAGAAAAATAAG...CCCCCAGGAGTTCAGAAACATCATCTCCCATATATGCTGATACAGCATAATAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CAA 90 bp AAAATAATGAACCTCCAGGACCTAAAGATCCTGATGTCTGTGGCATTGAGTCATCATCAAGTTCTGAGATaGTTTCCTCAGCTTGGTTTA +
Preference number: 5 (lower is better)
Translates to: KIMNLQDLKILMSVALSHHQVLR*FPQLGL
Trigger: TAAACCAAGCTGAGGAAACAATCTCAGAACTTGATG...ATGACTCAATGCCACAGACATCAGGATCTTTAGGTCCTGGAGGTTCATTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CAA 90 bp AAAATAATGAACCTCCAGGACCTAAAGATCCTGATGTCTGTGGCATTGAGTCATCATTTGATTCTGTCATaGTGCTGTCAGCTGGTTATT +
Preference number: 5 (lower is better)
Translates to: KIMNLQDLKILMSVALSHHLILS*CCQLVI
Trigger: AATAACCAGCTGACAGCACAATGACAGAATCAAATG...ATGACTCAATGCCACAGACATCAGGATCTTTAGGTCCTGGAGGTTCATTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CAA 90 bp TTTATTATGCTGTATCAGCATATATGGGAGATGATGTTTCTGAACTCCTGGGGGCTGATATGTGTGCATTaGATTCTGTCATTGTGCTGT +
Preference number: 5 (lower is better)
Translates to: FIMLYQHIWEMMFLNSWGLICVH*ILSLCC
Trigger: ACAGCACAATGACAGAATCAAATGCACACATATCAG...CCCCCAGGAGTTCAGAAACATCATCTCCCATATATGCTGATACAGCATAATAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS TCA 90 bp TGTTATAGTCCATTCATTATCATATTTTGTGGGTTAGGGAGATTCTaGTGGGCCATATCTGGCAGAAATCTCAGAATCTGTAAACTCAGC +
Preference number: 5 (lower is better)
Translates to: CYSPFIIIFCGLGRF*WAISGRNLRICKLS
Trigger: GCTGAGTTTACAGATTCTGAGATTTCTGCCAGATATGGCCCATCAGAATCTCCCTAACCCACAAAATATGATAATGAATGGACTATAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS-3UTR CAA 90 bp TTTATTATGCTGTATCAGCATATATGGGAGATGATGTTTCTGAACTCCTGGGGGCATAACCCATACTTCTaGGAGGCTTTGTTTATTTCT +
Preference number: 5 (lower is better)
Translates to: FIMLYQHIWEMMFLNSWGHNPYF*EALFIS
Trigger: AGAAATAAACAAAGCCTCCAAGAAGTATGGGTTATG...CCCCCAGGAGTTCAGAAACATCATCTCCCATATATGCTGATACAGCATAATAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS CCA 72 bp ATGGAATTTTTCAGGTGGGCGTATCACACTCCAAGATaGGCATGTTTGACCACAAAATTGGCTGTCCACTCA +
Preference number: 6 (lower is better)
Translates to: MEFFRWAYHTPR*ACLTTKLAVHS
Trigger: TGAGTGGACAGCCAATTTTGTGGTCAAACATGCCCATCTTGGAGTGTGATACGCCCACCTGAAAAATTCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641850.1
ENST00000641998.1
CDS CCA 72 bp ATAGGTGATTTCTGTAATATTTCCTCCCCCAGTCATTaGCTCAGTGCTCCTAATATCAGAAAGGAGACAAGA +
Preference number: 6 (lower is better)
Translates to: IGDFCNISSPSH*LSAPNIRKETR
Trigger: TCTTGTCTCCTTTCTGATATTAGGAGCACTGAGCCAATGACTGGGGGAGGAAATATTACAGAAATCACCTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313940.2
CDS TCA 72 bp GGTGGAGAAAACTGGGAAACATACCCAAGCAGGTTTTaGTCTGAGGAAATTCCTCTGAAACTCAGTAAATTA +
Preference number: 6 (lower is better)
Translates to: GGENWETYPSRF*SEEIPLKLSKL
Trigger: TAATTTACTGAGTTTCAGAGGAATTTCCTCAGATCAAAACCTGCTTGGGTATGTTTCCCAGTTTTCTCCACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641850.1
CDS CAA 72 bp GATTACAAAGAATATTTAAAGCAACACTTCTTGTGCTaGGAGTGGGTATCTCTGATATCTGTGTTGCCCAGG +
Preference number: 6 (lower is better)
Translates to: DYKEYLKQHFLC*EWVSLISVLPR
Trigger: CCTGGGCAACACAGATATCAGAGATACCCACTCCAAGCACAAGAAGTGTTGCTTTAAATATTCTTTGTAATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641850.1
CDS CCA 72 bp ATCAAAATCCTATCCAGTGCTAATCTAATAAGGACATaGTCAGTTTGCAAAGTTGTGCAGGGTACAAAATCA +
Preference number: 6 (lower is better)
Translates to: IKILSSANLIRT*SVCKVVQGTKS
Trigger: TGATTTTGTACCCTGCACAACTTTGCAAACTGACCATGTCCTTATTAGATTAGCACTGGATAGGATTTTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641850.1
CDS GCA 72 bp GTACTCCGTCATATCATTAAGACTCAGTGTGTCTCTTaGTATTCAGAGATCATAAATCAAAGCTATGTATTT +
Preference number: 6 (lower is better)
Translates to: VLRHIIKTQCVS*YSEIINQSYVF
Trigger: AAATACATAGCTTTGATTTATGATCTCTGAATAGCAAGAGACACACTGAGTCTTAATGATATGACGGAGTAC
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641850.1