RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OR5A2 (Homo sapiens)

Ensembl gene IDs: ENSG00000172324

Ensembl transcript IDs: ENST00000302040.6, ENST00000641361.1, ENST00000641673.1

Found 450 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGTAGTGCCCTTGCCCAGGGCCTCAGCCGATCTGGACCCTCTAGCTaGGTGTATCAGGAACTGATCCACTTTATCAGCTTTGCTGTGATC +
Preference number: 1 (lower is better)
Translates to: GSALAQGLSRSGPSS*VYQELIHFISFAVI
Trigger: GATCACAGCAAAGCTGATAAAGTGGATCAGTTCCTGATACACCCAGCTAGAGGGTCCAGATCGGCTGAGGCCCTGGGCAAGGGCACTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR TCA 90 bp GAGGACAAGTCACCAGGAAATCAGGGAGGTAGTCACGGATCAAGCTaGTGGAAGAACGTGCTGGCATACATGGCGTATCACCTTACATGC +
Preference number: 1 (lower is better)
Translates to: EDKSPGNQGGSHGSS*WKNVLAYMAYHLTC
Trigger: GCATGTAAGGTGATACGCCATGTATGCCAGCACGTTCTTCCATCAGCTTGATCCGTGACTACCTCCCTGATTTCCTGGTGACTTGTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR TCA 90 bp GACATCATAGTTCCATCTCAGAAGAACGTGGCTTTGAACACAAGATaGATTCTCTGTTTTTCTATGAGGTCTCCCCGGGTCCCAGCTGCC +
Preference number: 1 (lower is better)
Translates to: DIIVPSQKNVALNTR*ILCFSMRSPRVPAA
Trigger: GGCAGCTGGGACCCGGGGAGACCTCATAGAAAAACAGAGAATTCATCTTGTGTTCAAAGCCACGTTCTTCTGAGATGGAACTATGATGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR GCA 90 bp TGTGGTCCCACCCAAAGTGTGCGGTTAGTCTCTTCAACTAGATACTaGCAGCCATTTGGTCTGGCAATTCTGAAGAGAGATGCTGCTATA +
Preference number: 1 (lower is better)
Translates to: CGPTQSVRLVSSTRY*QPFGLAILKRDAAI
Trigger: TATAGCAGCATCTCTCTTCAGAATTGCCAGACCAAATGGCTGGCAGTATCTAGTTGAAGAGACTAACCGCACACTTTGGGTGGGACCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR GCA 90 bp AAGATGAATTCTCTGTTTTTCTATGAGGTCTCCCCGGGTCCCAGCTaGCGGTTTATTTATAGAATGTGGTCCCACCCAAAGTGTGCGGTT +
Preference number: 1 (lower is better)
Translates to: KMNSLFFYEVSPGPS*RFIYRMWSHPKCAV
Trigger: AACCGCACACTTTGGGTGGGACCACATTCTATAAATAAACCGGCAGCTGGGACCCGGGGAGACCTCATAGAAAAACAGAGAATTCATCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR GCA 90 bp CATGGCGTATCACCTTACATGCAAGATAGTCAGGTTGCCCCTGCTTaGTTTTATGTCAGGGAGATCCAGATTCATTATCTAGACACAAGC +
Preference number: 1 (lower is better)
Translates to: HGVSPYMQDSQVAPA*FYVREIQIHYLDTS
Trigger: GCTTGTGTCTAGATAATGAATCTGGATCTCCCTGACATAAAAGCAAGCAGGGGCAACCTGACTATCTTGCATGTAAGGTGATACGCCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR TCA 90 bp CAGGCCCCACCTCCAGCACTGGAGATTGCAATTAAACATGAGATGTaGATGGGGACAAATATCCAAATTCTATCAAGGCCCAAATCAGAA +
Preference number: 1 (lower is better)
Translates to: QAPPPALEIAIKHEM*MGTNIQILSRPKSE
Trigger: TTCTGATTTGGGCCTTGATAGAATTTGGATATTTGTCCCCATTCACATCTCATGTTTAATTGCAATCTCCAGTGCTGGAGGTGGGGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR CCA 90 bp GTGTGGCTATTTATTTGCCTGTACAAAAGAGTGAACTCTTATCCCTaGCCAGGCCCACAAGCAGTATTACATATAGGAGGTCTTAACCAG +
Preference number: 1 (lower is better)
Translates to: VWLFICLYKRVNSYP*PGPQAVLHIGGLNQ
Trigger: CTGGTTAAGACCTCCTATATGTAATACTGCTTGTGGGCCTGGCCAGGGATAAGAGTTCACTCTTTTGTACAGGCAAATAAATAGCCACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR GCA 90 bp AATGTTCAGGTTAAGGTAAAGGATTGTGGAGACCAAGTTTTATTGTaGAGAAGAAGCTCTCAGACAGCAGACTTCAGAGAGAGCAGGTTG +
Preference number: 1 (lower is better)
Translates to: NVQVKVKDCGDQVLL*RRSSQTADFRESRL
Trigger: CAACCTGCTCTCTCTGAAGTCTGCTGTCTGAGAGCTTCTTCTGCACAATAAAACTTGGTCTCCACAATCCTTTACCTTAACCTGAACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR TCA 90 bp TTGTGCCACTGGCGTAAGTTCAAGCTTGGCAGCTTTGTTCTTCACTaGAAATTAAATCTGTCATTCTGGCTTATGCAGATAGCTATTCTG +
Preference number: 1 (lower is better)
Translates to: LCHWRKFKLGSFVLH*KLNLSFWLMQIAIL
Trigger: CAGAATAGCTATCTGCATAAGCCAGAATGACAGATTTAATTTTCAGTGAAGAACAAAGCTGCCAAGCTTGAACTTACGCCAGTGGCACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR CCA 90 bp CCCCACCTCCAGCACTGGAGATTGCAATTAAACATGAGATGTGAATaGGGACAAATATCCAAATTCTATCAAGGCCCAAATCAGAATTAT +
Preference number: 1 (lower is better)
Translates to: PHLQHWRLQLNMRCE*GQISKFYQGPNQNY
Trigger: ATAATTCTGATTTGGGCCTTGATAGAATTTGGATATTTGTCCCCATTCACATCTCATGTTTAATTGCAATCTCCAGTGCTGGAGGTGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR GCA 90 bp TCCATTTTATGGTTAGGATCTGAGGCACCTAGAGTCCAAGCAACTTaGCTAAAGACACACAGGCAGATATTATTTACTCACTTATTTATA +
Preference number: 1 (lower is better)
Translates to: SILWLGSEAPRVQAT*LKTHRQILFTHLFI
Trigger: TATAAATAAGTGAGTAAATAATATCTGCCTGTGTGTCTTTAGGCAAGTTGCTTGGACTCTAGGTGCCTCAGATCCTAACCATAAAATGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR-3UTR CCA 90 bp TGGCTATTTATTTGCCTGTACAAAAGAGTGAACTCTTATCCCTGGCCAGGCCCACCATATGCCAGGCACTaGGCTAAGCCCTCTTTATGC +
Preference number: 2 (lower is better)
Translates to: WLFICLYKRVNSYPWPGPPYARH*AKPSLC
Trigger: GCATAAAGAGGGCTTAGCCCAGTGCCTGGCATATGG...TGGGCCTGGCCAGGGATAAGAGTTCACTCTTTTGTACAGGCAAATAAATAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR-3UTR CCA 90 bp TGGCTATTTATTTGCCTGTACAAAAGAGTGAACTCTTATCCCTGGCCAGGCCCACGGGACAACTCAAATTaGAGACTTCCAGGCTATGGG +
Preference number: 2 (lower is better)
Translates to: WLFICLYKRVNSYPWPGPRDNSN*RLPGYG
Trigger: CCCATAGCCTGGAAGTCTCCAATTTGAGTTGTCCCG...TGGGCCTGGCCAGGGATAAGAGTTCACTCTTTTGTACAGGCAAATAAATAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR-3UTR TCA 90 bp TGGCTATTTATTTGCCTGTACAAAAGAGTGAACTCTTATCCCTGGCCAGGCCCAAGGATAGGAGCTTGGTaGGTTAGAGTACAGGTCAAG +
Preference number: 2 (lower is better)
Translates to: WLFICLYKRVNSYPWPGPRIGAW*VRVQVK
Trigger: CTTGACCTGTACTCTAACTCACCAAGCTCCTATCCT...TGGGCCTGGCCAGGGATAAGAGTTCACTCTTTTGTACAGGCAAATAAATAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR-3UTR CCA 90 bp TGGCTATTTATTTGCCTGTACAAAAGAGTGAACTCTTATCCCTGGCCAGGCCCAACGTGCTGGCATACATaGCGTATCACCTTACATGCA +
Preference number: 2 (lower is better)
Translates to: WLFICLYKRVNSYPWPGPTCWHT*RITLHA
Trigger: TGCATGTAAGGTGATACGCCATGTATGCCAGCACGT...TGGGCCTGGCCAGGGATAAGAGTTCACTCTTTTGTACAGGCAAATAAATAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR-3UTR CCA 90 bp TGGCTATTTATTTGCCTGTACAAAAGAGTGAACTCTTATCCCTGGCCAGGCCCAGTCAATATAAACACCTaGCTTATCATCCCCAGGGGG +
Preference number: 2 (lower is better)
Translates to: WLFICLYKRVNSYPWPGPVNINT*LIIPRG
Trigger: CCCCCTGGGGATGATAAGCCAGGTGTTTATATTGAC...TGGGCCTGGCCAGGGATAAGAGTTCACTCTTTTGTACAGGCAAATAAATAGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR-3UTR TCA 90 bp TGGCTATTTATTTGCCTGTACAAAAGAGTGAACTCTTATCCCTGGCCAGGCCCACATCCCCAGGGGGTTTaGAAATGTTATAGACATGAG +
Preference number: 2 (lower is better)
Translates to: WLFICLYKRVNSYPWPGPHPQGV*KCYRHE
Trigger: CTCATGTCTATAACATTTTCAAACCCCCTGGGGATG...TGGGCCTGGCCAGGGATAAGAGTTCACTCTTTTGTACAGGCAAATAAATAGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR-3UTR GCA 90 bp CAAGAACTCACTATCATGAATACAACACCAACCCATGAGAGATCCACCCCCATAACATGGGAAGGTATCTaGCCTGTGGTTTTCATGAGC +
Preference number: 2 (lower is better)
Translates to: QELTIMNTTPTHERSTPITWEGI*PVVFMS
Trigger: GCTCATGAAAACCACAGGGCAGATACCTTCCCATGT...TATGGGGGTGGATCTCTCATGGGTTGGTGTTGTATTCATGATAGTGAGTTCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR-3UTR GCA 90 bp TGGCTATTTATTTGCCTGTACAAAAGAGTGAACTCTTATCCCTGGCCAGGCCCAAGTTGCAAACATGAGTaGCACACCCTAGATGATGGT +
Preference number: 2 (lower is better)
Translates to: WLFICLYKRVNSYPWPGPSCKHE*HTLDDG
Trigger: ACCATCATCTAGGGTGTGGCACTCATGTTTGCAACT...TGGGCCTGGCCAGGGATAAGAGTTCACTCTTTTGTACAGGCAAATAAATAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR-3UTR GCA 90 bp TGGCTATTTATTTGCCTGTACAAAAGAGTGAACTCTTATCCCTGGCCAGGCCCACCACTTTATCAGCTTTaGTGTGATCCCTTTCTCTCC +
Preference number: 2 (lower is better)
Translates to: WLFICLYKRVNSYPWPGPPLYQL*CDPFLS
Trigger: GGAGAGAAAGGGATCACAGCAAAGCTGATAAAGTGG...TGGGCCTGGCCAGGGATAAGAGTTCACTCTTTTGTACAGGCAAATAAATAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR-3UTR CCA 90 bp TGGCTATTTATTTGCCTGTACAAAAGAGTGAACTCTTATCCCTGGCCAGGCCCACATGATTCTGAAACATaGGAAGGTATCTGCCCTGTG +
Preference number: 2 (lower is better)
Translates to: WLFICLYKRVNSYPWPGPHDSET*EGICPV
Trigger: CACAGGGCAGATACCTTCCCATGTTTCAGAATCATG...TGGGCCTGGCCAGGGATAAGAGTTCACTCTTTTGTACAGGCAAATAAATAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR-3UTR TCA 90 bp TATGCCAGGCACTGGGCTAAGCCCTCTTTATGCATATTCTCACTTAATTGTTGTTGCCTGGCTCTTAGTTaGTTATCTCCTAGATCAGGG +
Preference number: 2 (lower is better)
Translates to: YARHWAKPSLCIFSLNCCCLALS*LSPRSG
Trigger: CCCTGATCTAGGAGATAATCAACTAAGAGCCAGGCA...ACAACAATTAAGTGAGAATATGCATAAAGAGGGCTTAGCCCAGTGCCTGGCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR-3UTR GCA 90 bp TATGCCAGGCACTGGGCTAAGCCCTCTTTATGCATATTCTCACTTAATTGTTGTACATGGGAAGGTATCTaGCCTGTGGTTTTCATGAGC +
Preference number: 2 (lower is better)
Translates to: YARHWAKPSLCIFSLNCCTWEGI*PVVFMS
Trigger: GCTCATGAAAACCACAGGGCAGATACCTTCCCATGT...ACAACAATTAAGTGAGAATATGCATAAAGAGGGCTTAGCCCAGTGCCTGGCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR-3UTR CCA 90 bp TATGCCAGGCACTGGGCTAAGCCCTCTTTATGCATATTCTCACTTAATTGTTGTCCCCACCTCCAGCACTaGAGATTGCAATTAAACATG +
Preference number: 2 (lower is better)
Translates to: YARHWAKPSLCIFSLNCCPHLQH*RLQLNM
Trigger: CATGTTTAATTGCAATCTCCAGTGCTGGAGGTGGGG...ACAACAATTAAGTGAGAATATGCATAAAGAGGGCTTAGCCCAGTGCCTGGCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR CAA 90 bp AGAAATGTTCAGGTTAAGGTAAAGGATTGTGGAGACCAAGTTTTATaGTGCAGAAGAAGCTCTCAGACAGCAGACTTCAGAGAGAGCAGG +
Preference number: 2 (lower is better)
Translates to: RNVQVKVKDCGDQVL*CRRSSQTADFRESR
Trigger: CCTGCTCTCTCTGAAGTCTGCTGTCTGAGAGCTTCTTCTGCACAATAAAACTTGGTCTCCACAATCCTTTACCTTAACCTGAACATTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR-3UTR TCA 90 bp TGGCTATTTATTTGCCTGTACAAAAGAGTGAACTCTTATCCCTGGCCAGGCCCATCTAAGGAAACCATTTaGGAATCTCAGAAGAGGGAA +
Preference number: 2 (lower is better)
Translates to: WLFICLYKRVNSYPWPGPSKETI*ESQKRE
Trigger: TTCCCTCTTCTGAGATTCTCAAATGGTTTCCTTAGA...TGGGCCTGGCCAGGGATAAGAGTTCACTCTTTTGTACAGGCAAATAAATAGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR-3UTR TCA 90 bp TGGCTATTTATTTGCCTGTACAAAAGAGTGAACTCTTATCCCTGGCCAGGCCCAAAGAACTCACTATCATaGATACAACACCAACCCATG +
Preference number: 2 (lower is better)
Translates to: WLFICLYKRVNSYPWPGPKNSLS*IQHQPM
Trigger: CATGGGTTGGTGTTGTATTCATGATAGTGAGTTCTT...TGGGCCTGGCCAGGGATAAGAGTTCACTCTTTTGTACAGGCAAATAAATAGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR-3UTR TCA 90 bp TATGCCAGGCACTGGGCTAAGCCCTCTTTATGCATATTCTCACTTAATTGTTGTGCCTCTTTTTGTAGTTaGTTGAATTGGCCGAGAGGT +
Preference number: 2 (lower is better)
Translates to: YARHWAKPSLCIFSLNCCASFCS*LNWPRG
Trigger: ACCTCTCGGCCAATTCAATCAACTACAAAAAGAGGC...ACAACAATTAAGTGAGAATATGCATAAAGAGGGCTTAGCCCAGTGCCTGGCATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR-3UTR TCA 90 bp TGGCTATTTATTTGCCTGTACAAAAGAGTGAACTCTTATCCCTGGCCAGGCCCATTATCAGCTTTGCTGTaGTCCCTTTCTCTCCAAATA +
Preference number: 2 (lower is better)
Translates to: WLFICLYKRVNSYPWPGPLSALL*SLSLQI
Trigger: TATTTGGAGAGAAAGGGATCACAGCAAAGCTGATAA...TGGGCCTGGCCAGGGATAAGAGTTCACTCTTTTGTACAGGCAAATAAATAGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR-3UTR GCA 90 bp TGGCTATTTATTTGCCTGTACAAAAGAGTGAACTCTTATCCCTGGCCAGGCCCAATTCTTAACCCTCTTTaGAAAAGTCCCTCCATATCC +
Preference number: 2 (lower is better)
Translates to: WLFICLYKRVNSYPWPGPILNPL*KSPSIS
Trigger: GGATATGGAGGGACTTTTGCAAAGAGGGTTAAGAAT...TGGGCCTGGCCAGGGATAAGAGTTCACTCTTTTGTACAGGCAAATAAATAGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR-3UTR GCA 90 bp TGGCTATTTATTTGCCTGTACAAAAGAGTGAACTCTTATCCCTGGCCAGGCCCAAAGATTTTTGGAAGTTaGAAACATGAGTGCCACACC +
Preference number: 2 (lower is better)
Translates to: WLFICLYKRVNSYPWPGPKIFGS*KHECHT
Trigger: GGTGTGGCACTCATGTTTGCAACTTCCAAAAATCTT...TGGGCCTGGCCAGGGATAAGAGTTCACTCTTTTGTACAGGCAAATAAATAGCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR-3UTR CCA 90 bp TGGCTATTTATTTGCCTGTACAAAAGAGTGAACTCTTATCCCTGGCCAGGCCCATCTAATGAGAATTTATaGTTTGCAGGGCATGACTCC +
Preference number: 2 (lower is better)
Translates to: WLFICLYKRVNSYPWPGPSNENL*FAGHDS
Trigger: GGAGTCATGCCCTGCAAACCATAAATTCTCATTAGA...TGGGCCTGGCCAGGGATAAGAGTTCACTCTTTTGTACAGGCAAATAAATAGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR-3UTR TCA 90 bp CAAGAACTCACTATCATGAATACAACACCAACCCATGAGAGATCCACCCCCATATCTAAGGAAACCATTTaGGAATCTCAGAAGAGGGAA +
Preference number: 2 (lower is better)
Translates to: QELTIMNTTPTHERSTPISKETI*ESQKRE
Trigger: TTCCCTCTTCTGAGATTCTCAAATGGTTTCCTTAGA...TATGGGGGTGGATCTCTCATGGGTTGGTGTTGTATTCATGATAGTGAGTTCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR-3UTR TCA 90 bp TGGCTATTTATTTGCCTGTACAAAAGAGTGAACTCTTATCCCTGGCCAGGCCCACTTTTTGTAGTTGATTaGATTGGCCGAGAGGTTTTT +
Preference number: 2 (lower is better)
Translates to: WLFICLYKRVNSYPWPGPLFVVD*IGREVF
Trigger: AAAAACCTCTCGGCCAATTCAATCAACTACAAAAAG...TGGGCCTGGCCAGGGATAAGAGTTCACTCTTTTGTACAGGCAAATAAATAGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR-3UTR TCA 90 bp CAGATAGCTATTCTGAGCTTGGTTAACTTCAGTCCATCTGGAAAAGATTTTTGGTGCCTGGCTCTTAGTTaGTTATCTCCTAGATCAGGG +
Preference number: 2 (lower is better)
Translates to: QIAILSLVNFSPSGKDFWCLALS*LSPRSG
Trigger: CCCTGATCTAGGAGATAATCAACTAAGAGCCAGGCA...CCAAAAATCTTTTCCAGATGGACTGAAGTTAACCAAGCTCAGAATAGCTATCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR-3UTR TCA 90 bp TGGCTATTTATTTGCCTGTACAAAAGAGTGAACTCTTATCCCTGGCCAGGCCCAAAAGTAAGTGAATGTTaGTGGTGCATAGGACAACAA +
Preference number: 2 (lower is better)
Translates to: WLFICLYKRVNSYPWPGPKVSEC*WCIGQQ
Trigger: TTGTTGTCCTATGCACCATCAACATTCACTTACTTT...TGGGCCTGGCCAGGGATAAGAGTTCACTCTTTTGTACAGGCAAATAAATAGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR-3UTR TCA 90 bp CAGATAGCTATTCTGAGCTTGGTTAACTTCAGTCCATCTGGAAAAGATTTTTGGGCCTCTTTTTGTAGTTaGTTGAATTGGCCGAGAGGT +
Preference number: 2 (lower is better)
Translates to: QIAILSLVNFSPSGKDFWASFCS*LNWPRG
Trigger: ACCTCTCGGCCAATTCAATCAACTACAAAAAGAGGC...CCAAAAATCTTTTCCAGATGGACTGAAGTTAACCAAGCTCAGAATAGCTATCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR-3UTR GCA 90 bp TGGCTATTTATTTGCCTGTACAAAAGAGTGAACTCTTATCCCTGGCCAGGCCCAAAGGCCTACTGTTCTTaGACTGCTATAAAAATATTC +
Preference number: 2 (lower is better)
Translates to: WLFICLYKRVNSYPWPGPKAYCS*TAIKIF
Trigger: GAATATTTTTATAGCAGTGCAAGAACAGTAGGCCTT...TGGGCCTGGCCAGGGATAAGAGTTCACTCTTTTGTACAGGCAAATAAATAGCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR-3UTR CCA 90 bp TGGCTATTTATTTGCCTGTACAAAAGAGTGAACTCTTATCCCTGGCCAGGCCCAAACATGAGATGTGAATaGGGACAAATATCCAAATTC +
Preference number: 2 (lower is better)
Translates to: WLFICLYKRVNSYPWPGPNMRCE*GQISKF
Trigger: GAATTTGGATATTTGTCCCCATTCACATCTCATGTT...TGGGCCTGGCCAGGGATAAGAGTTCACTCTTTTGTACAGGCAAATAAATAGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR-3UTR CCA 90 bp TGGCTATTTATTTGCCTGTACAAAAGAGTGAACTCTTATCCCTGGCCAGGCCCAATAAAGAGATTTAATTaGCTCACAGTTCTTCAGGCT +
Preference number: 2 (lower is better)
Translates to: WLFICLYKRVNSYPWPGPIKRFN*LTVLQA
Trigger: AGCCTGAAGAACTGTGAGCCAATTAAATCTCTTTAT...TGGGCCTGGCCAGGGATAAGAGTTCACTCTTTTGTACAGGCAAATAAATAGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR-3UTR CCA 90 bp TATGCCAGGCACTGGGCTAAGCCCTCTTTATGCATATTCTCACTTAATTGTTGTTCTAATGAGAATTTATaGTTTGCAGGGCATGACTCC +
Preference number: 2 (lower is better)
Translates to: YARHWAKPSLCIFSLNCCSNENL*FAGHDS
Trigger: GGAGTCATGCCCTGCAAACCATAAATTCTCATTAGA...ACAACAATTAAGTGAGAATATGCATAAAGAGGGCTTAGCCCAGTGCCTGGCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR-3UTR CCA 90 bp TGGCTATTTATTTGCCTGTACAAAAGAGTGAACTCTTATCCCTGGCCAGGCCCAATTCTCTATAGAATGTaGATTTTTCCCACAAGAGAC +
Preference number: 2 (lower is better)
Translates to: WLFICLYKRVNSYPWPGPILYRM*IFPTRD
Trigger: GTCTCTTGTGGGAAAAATCCACATTCTATAGAGAAT...TGGGCCTGGCCAGGGATAAGAGTTCACTCTTTTGTACAGGCAAATAAATAGCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR-3UTR CCA 90 bp TGGCTATTTATTTGCCTGTACAAAAGAGTGAACTCTTATCCCTGGCCAGGCCCAGAGACTTCCAGGCTATaGGTAAATTTAAACATTTTC +
Preference number: 2 (lower is better)
Translates to: WLFICLYKRVNSYPWPGPETSRL*VNLNIF
Trigger: GAAAATGTTTAAATTTACCCATAGCCTGGAAGTCTC...TGGGCCTGGCCAGGGATAAGAGTTCACTCTTTTGTACAGGCAAATAAATAGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR-3UTR CCA 90 bp TGGCTATTTATTTGCCTGTACAAAAGAGTGAACTCTTATCCCTGGCCAGGCCCAATTTGTCTTTCTATATaGCTTCCTGACAGATGGATA +
Preference number: 2 (lower is better)
Translates to: WLFICLYKRVNSYPWPGPICLSI*LPDRWI
Trigger: TATCCATCTGTCAGGAAGCCATATAGAAAGACAAAT...TGGGCCTGGCCAGGGATAAGAGTTCACTCTTTTGTACAGGCAAATAAATAGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR-3UTR CCA 90 bp CAAGAACTCACTATCATGAATACAACACCAACCCATGAGAGATCCACCCCCATAAACATGAGATGTGAATaGGGACAAATATCCAAATTC +
Preference number: 2 (lower is better)
Translates to: QELTIMNTTPTHERSTPINMRCE*GQISKF
Trigger: GAATTTGGATATTTGTCCCCATTCACATCTCATGTT...TATGGGGGTGGATCTCTCATGGGTTGGTGTTGTATTCATGATAGTGAGTTCTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR-3UTR CCA 90 bp CAGATAGCTATTCTGAGCTTGGTTAACTTCAGTCCATCTGGAAAAGATTTTTGGATAGAGATAGTAATATaGGTGCACCTGTTGGCTGAG +
Preference number: 2 (lower is better)
Translates to: QIAILSLVNFSPSGKDFWIEIVI*VHLLAE
Trigger: CTCAGCCAACAGGTGCACCCATATTACTATCTCTAT...CCAAAAATCTTTTCCAGATGGACTGAAGTTAACCAAGCTCAGAATAGCTATCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR CAA 90 bp TTCCAGGCTATGGGTAAATTTAAACATTTTCTGGCAGACAATTGGTaGAGTTCGTCTGAAGACCTGGGATTAATGGAAAGAAATGTTCAG +
Preference number: 2 (lower is better)
Translates to: FQAMGKFKHFLADNW*SSSEDLGLMERNVQ
Trigger: CTGAACATTTCTTTCCATTAATCCCAGGTCTTCAGACGAACTCAACCAATTGTCTGCCAGAAAATGTTTAAATTTACCCATAGCCTGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR-3UTR GCA 90 bp TATGCCAGGCACTGGGCTAAGCCCTCTTTATGCATATTCTCACTTAATTGTTGTAATTATGTAAATGTCTaGACAATTCACCTAGCTCAC +
Preference number: 2 (lower is better)
Translates to: YARHWAKPSLCIFSLNCCNYVNV*TIHLAH
Trigger: GTGAGCTAGGTGAATTGTGCAGACATTTACATAATT...ACAACAATTAAGTGAGAATATGCATAAAGAGGGCTTAGCCCAGTGCCTGGCATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR-3UTR GCA 90 bp CAGATAGCTATTCTGAGCTTGGTTAACTTCAGTCCATCTGGAAAAGATTTTTGGTCCCACAAGAGACTTTaGAAGGCAATTTCAAGGTAT +
Preference number: 2 (lower is better)
Translates to: QIAILSLVNFSPSGKDFWSHKRL*KAISRY
Trigger: ATACCTTGAAATTGCCTTGCAAAGTCTCTTGTGGGA...CCAAAAATCTTTTCCAGATGGACTGAAGTTAACCAAGCTCAGAATAGCTATCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR-3UTR CCA 90 bp TATGCCAGGCACTGGGCTAAGCCCTCTTTATGCATATTCTCACTTAATTGTTGTATAAAGAGATTTAATTaGCTCACAGTTCTTCAGGCT +
Preference number: 2 (lower is better)
Translates to: YARHWAKPSLCIFSLNCCIKRFN*LTVLQA
Trigger: AGCCTGAAGAACTGTGAGCCAATTAAATCTCTTTAT...ACAACAATTAAGTGAGAATATGCATAAAGAGGGCTTAGCCCAGTGCCTGGCATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR-3UTR CCA 90 bp TATGCCAGGCACTGGGCTAAGCCCTCTTTATGCATATTCTCACTTAATTGTTGTATTCTCTATAGAATGTaGATTTTTCCCACAAGAGAC +
Preference number: 2 (lower is better)
Translates to: YARHWAKPSLCIFSLNCCILYRM*IFPTRD
Trigger: GTCTCTTGTGGGAAAAATCCACATTCTATAGAGAAT...ACAACAATTAAGTGAGAATATGCATAAAGAGGGCTTAGCCCAGTGCCTGGCATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR-3UTR TCA 90 bp CAGATAGCTATTCTGAGCTTGGTTAACTTCAGTCCATCTGGAAAAGATTTTTGGCTTTTTGTAGTTGATTaGATTGGCCGAGAGGTTTTT +
Preference number: 2 (lower is better)
Translates to: QIAILSLVNFSPSGKDFWLFVVD*IGREVF
Trigger: AAAAACCTCTCGGCCAATTCAATCAACTACAAAAAG...CCAAAAATCTTTTCCAGATGGACTGAAGTTAACCAAGCTCAGAATAGCTATCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR-3UTR CCA 90 bp CAGATAGCTATTCTGAGCTTGGTTAACTTCAGTCCATCTGGAAAAGATTTTTGGCTGATATGTCTCAATTaGAGTGGATACCCTAAACTT +
Preference number: 2 (lower is better)
Translates to: QIAILSLVNFSPSGKDFWLICLN*SGYPKL
Trigger: AAGTTTAGGGTATCCACTCCAATTGAGACATATCAG...CCAAAAATCTTTTCCAGATGGACTGAAGTTAACCAAGCTCAGAATAGCTATCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR-3UTR GCA 90 bp CAGATAGCTATTCTGAGCTTGGTTAACTTCAGTCCATCTGGAAAAGATTTTTGGGAACTGCTTCTGATATaGAAGAGAAATCATAGAGAT +
Preference number: 2 (lower is better)
Translates to: QIAILSLVNFSPSGKDFWELLLI*KRNHRD
Trigger: ATCTCTATGATTTCTCTTGCATATCAGAAGCAGTTC...CCAAAAATCTTTTCCAGATGGACTGAAGTTAACCAAGCTCAGAATAGCTATCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR-3UTR GCA 90 bp CAGATAGCTATTCTGAGCTTGGTTAACTTCAGTCCATCTGGAAAAGATTTTTGGGGTAGTTGGGCAAACTaGAAAAATACCTTATATCTT +
Preference number: 2 (lower is better)
Translates to: QIAILSLVNFSPSGKDFWGSWAN*KNTLYL
Trigger: AAGATATAAGGTATTTTTGCAGTTTGCCCAACTACC...CCAAAAATCTTTTCCAGATGGACTGAAGTTAACCAAGCTCAGAATAGCTATCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR-3UTR CCA 90 bp CAGATAGCTATTCTGAGCTTGGTTAACTTCAGTCCATCTGGAAAAGATTTTTGGAACATGAGATGTGAATaGGGACAAATATCCAAATTC +
Preference number: 2 (lower is better)
Translates to: QIAILSLVNFSPSGKDFWNMRCE*GQISKF
Trigger: GAATTTGGATATTTGTCCCCATTCACATCTCATGTT...CCAAAAATCTTTTCCAGATGGACTGAAGTTAACCAAGCTCAGAATAGCTATCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR-3UTR CCA 90 bp CAGATAGCTATTCTGAGCTTGGTTAACTTCAGTCCATCTGGAAAAGATTTTTGGATAATTTCCATTTTATaGTTAGGATCTGAGGCACCT +
Preference number: 2 (lower is better)
Translates to: QIAILSLVNFSPSGKDFWIISIL*LGSEAP
Trigger: AGGTGCCTCAGATCCTAACCATAAAATGGAAATTAT...CCAAAAATCTTTTCCAGATGGACTGAAGTTAACCAAGCTCAGAATAGCTATCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR-3UTR CCA 90 bp CAGATAGCTATTCTGAGCTTGGTTAACTTCAGTCCATCTGGAAAAGATTTTTGGGAGACTTCCAGGCTATaGGTAAATTTAAACATTTTC +
Preference number: 2 (lower is better)
Translates to: QIAILSLVNFSPSGKDFWETSRL*VNLNIF
Trigger: GAAAATGTTTAAATTTACCCATAGCCTGGAAGTCTC...CCAAAAATCTTTTCCAGATGGACTGAAGTTAACCAAGCTCAGAATAGCTATCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR CAA 90 bp AAATTAAATCTGTCATTCTGGCTTATGCAGATAGCTATTCTGAGCTaGGTTAACTTCAGTCCATCTGGAAAAGATTTTTGGAAGTTGCAA +
Preference number: 2 (lower is better)
Translates to: KLNLSFWLMQIAILS*VNFSPSGKDFWKLQ
Trigger: TTGCAACTTCCAAAAATCTTTTCCAGATGGACTGAAGTTAACCAAGCTCAGAATAGCTATCTGCATAAGCCAGAATGACAGATTTAATTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR-3UTR GCA 90 bp TTCGATGACTTTCCTCCTATACATACAAACTCTGTTTTAACATTCCAGGATGTTAATTATGTAAATGTCTaGACAATTCACCTAGCTCAC +
Preference number: 2 (lower is better)
Translates to: FDDFPPIHTNSVLTFQDVNYVNV*TIHLAH
Trigger: GTGAGCTAGGTGAATTGTGCAGACATTTACATAATT...AACATCCTGGAATGTTAAAACAGAGTTTGTATGTATAGGAGGAAAGTCATCGAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR-3UTR CAA 90 bp AAAGGGGGAGCAGGTACATCACATGACAAAAGCAGGAGCAAGAGAGAGAGGCAGGAAAGTGGCAGGGGATaGGTGGGAGTGCTACACACT +
Preference number: 3 (lower is better)
Translates to: KGGAGTSHDKSRSKRERQESGRG*VGVLHT
Trigger: AGTGTGTAGCACTCCCACCAATCCCCTGCCACTTTC...CTGCCTCTCTCTCTTGCTCCTGCTTTTGTCATGTGATGTACCTGCTCCCCCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR CCA 72 bp TCCCCGGGTCCCAGCTGCCGGTTTATTTATAGAATGTaGTCCCACCCAAAGTGTGCGGTTAGTCTCTTCAAC +
Preference number: 3 (lower is better)
Translates to: SPGPSCRFIYRM*SHPKCAVSLFN
Trigger: GTTGAAGAGACTAACCGCACACTTTGGGTGGGACCACATTCTATAAATAAACCGGCAGCTGGGACCCGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR-3UTR CAA 90 bp TGGCTATTTATTTGCCTGTACAAAAGAGTGAACTCTTATCCCTGGCCAGGCCCAAAATTGGTAGTGCCCTaGCCCAGGGCCTCAGCCGAT +
Preference number: 3 (lower is better)
Translates to: WLFICLYKRVNSYPWPGPKLVVP*PRASAD
Trigger: ATCGGCTGAGGCCCTGGGCAAGGGCACTACCAATTT...TGGGCCTGGCCAGGGATAAGAGTTCACTCTTTTGTACAGGCAAATAAATAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR TCA 72 bp TCACCAGGAAATCAGGGAGGTAGTCACGGATCAAGCTaGTGGAAGAACGTGCTGGCATACATGGCGTATCAC +
Preference number: 3 (lower is better)
Translates to: SPGNQGGSHGSS*WKNVLAYMAYH
Trigger: GTGATACGCCATGTATGCCAGCACGTTCTTCCATCAGCTTGATCCGTGACTACCTCCCTGATTTCCTGGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR-3UTR CAA 90 bp TGGCTATTTATTTGCCTGTACAAAAGAGTGAACTCTTATCCCTGGCCAGGCCCAGCTTGGGGAGAAAAATaGGTAGTGCCCTTGCCCAGG +
Preference number: 3 (lower is better)
Translates to: WLFICLYKRVNSYPWPGPAWGEK*VVPLPR
Trigger: CCTGGGCAAGGGCACTACCAATTTTTCTCCCCAAGC...TGGGCCTGGCCAGGGATAAGAGTTCACTCTTTTGTACAGGCAAATAAATAGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR GCA 72 bp AGGGAGGTAGTCACGGATCAAGCTGATGGAAGAACGTaGTGGCATACATGGCGTATCACCTTACATGCAAGA +
Preference number: 3 (lower is better)
Translates to: REVVTDQADGRT*WHTWRITLHAR
Trigger: TCTTGCATGTAAGGTGATACGCCATGTATGCCAGCACGTTCTTCCATCAGCTTGATCCGTGACTACCTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR GCA 72 bp TCTCTGTTTTTCTATGAGGTCTCCCCGGGTCCCAGCTaGCGGTTTATTTATAGAATGTGGTCCCACCCAAAG +
Preference number: 3 (lower is better)
Translates to: SLFFYEVSPGPS*RFIYRMWSHPK
Trigger: CTTTGGGTGGGACCACATTCTATAAATAAACCGGCAGCTGGGACCCGGGGAGACCTCATAGAAAAACAGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR TCA 72 bp GACCGGTGTGGCTATTTATTTGCCTGTACAAAAGAGTaGACTCTTATCCCTGGCCAGGCCCACAAGCAGTAT +
Preference number: 3 (lower is better)
Translates to: DRCGYLFACTKE*TLIPGQAHKQY
Trigger: ATACTGCTTGTGGGCCTGGCCAGGGATAAGAGTTCACTCTTTTGTACAGGCAAATAAATAGCCACACCGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR-3UTR CAA 90 bp TGGCTATTTATTTGCCTGTACAAAAGAGTGAACTCTTATCCCTGGCCAGGCCCAATATGGGTGCACCTGTaGGCTGAGACTGATATGTCT +
Preference number: 3 (lower is better)
Translates to: WLFICLYKRVNSYPWPGPIWVHL*AETDMS
Trigger: AGACATATCAGTCTCAGCCAACAGGTGCACCCATAT...TGGGCCTGGCCAGGGATAAGAGTTCACTCTTTTGTACAGGCAAATAAATAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR GCA 72 bp AAGAACGTGCTGGCATACATGGCGTATCACCTTACATaGAAGATAGTCAGGTTGCCCCTGCTTGCTTTTATG +
Preference number: 3 (lower is better)
Translates to: KNVLAYMAYHLT*KIVRLPLLAFM
Trigger: CATAAAAGCAAGCAGGGGCAACCTGACTATCTTGCATGTAAGGTGATACGCCATGTATGCCAGCACGTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR GCA 72 bp ACCCAAAGTGTGCGGTTAGTCTCTTCAACTAGATACTaGCAGCCATTTGGTCTGGCAATTCTGAAGAGAGAT +
Preference number: 3 (lower is better)
Translates to: TQSVRLVSSTRY*QPFGLAILKRD
Trigger: ATCTCTCTTCAGAATTGCCAGACCAAATGGCTGGCAGTATCTAGTTGAAGAGACTAACCGCACACTTTGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR-3UTR CAA 90 bp TATGCCAGGCACTGGGCTAAGCCCTCTTTATGCATATTCTCACTTAATTGTTGTATGAGAATTTATGGTTaGCAGGGCATGACTCCCCAG +
Preference number: 3 (lower is better)
Translates to: YARHWAKPSLCIFSLNCCMRIYG*QGMTPQ
Trigger: CTGGGGAGTCATGCCCTGCAAACCATAAATTCTCAT...ACAACAATTAAGTGAGAATATGCATAAAGAGGGCTTAGCCCAGTGCCTGGCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR TCA 72 bp ACAAGAACTCACTATCATGAATACAACACCAACCCATaGGAGATCCACCCCCATAGATTCAAACACCTCCCA +
Preference number: 3 (lower is better)
Translates to: TRTHYHEYNTNP*EIHPHRFKHLP
Trigger: TGGGAGGTGTTTGAATCTATGGGGGTGGATCTCTCATGGGTTGGTGTTGTATTCATGATAGTGAGTTCTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR GCA 72 bp TCCTATGGCCATGATTCTGAAACATGGGAAGGTATCTaGCCTGTGGTTTTCATGAGCTCTAAGGAAACCATT +
Preference number: 3 (lower is better)
Translates to: SYGHDSETWEGI*PVVFMSSKETI
Trigger: AATGGTTTCCTTAGAGCTCATGAAAACCACAGGGCAGATACCTTCCCATGTTTCAGAATCATGGCCATAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR GCA 72 bp TGGTTAGGATCTGAGGCACCTAGAGTCCAAGCAACTTaGCTAAAGACACACAGGCAGATATTATTTACTCAC +
Preference number: 3 (lower is better)
Translates to: WLGSEAPRVQAT*LKTHRQILFTH
Trigger: GTGAGTAAATAATATCTGCCTGTGTGTCTTTAGGCAAGTTGCTTGGACTCTAGGTGCCTCAGATCCTAACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR TCA 72 bp CAATATAAACACCTGGCTTATCATCCCCAGGGGGTTTaGAAATGTTATAGACATGAGGACAAGTCACCAGGA +
Preference number: 3 (lower is better)
Translates to: QYKHLAYHPQGV*KCYRHEDKSPG
Trigger: TCCTGGTGACTTGTCCTCATGTCTATAACATTTTCAAACCCCCTGGGGATGATAAGCCAGGTGTTTATATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR GCA 72 bp GTTAAGGTAAAGGATTGTGGAGACCAAGTTTTATTGTaGAGAAGAAGCTCTCAGACAGCAGACTTCAGAGAG +
Preference number: 3 (lower is better)
Translates to: VKVKDCGDQVLL*RRSSQTADFRE
Trigger: CTCTCTGAAGTCTGCTGTCTGAGAGCTTCTTCTGCACAATAAAACTTGGTCTCCACAATCCTTTACCTTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR CCA 72 bp TTTATTTGCCTGTACAAAAGAGTGAACTCTTATCCCTaGCCAGGCCCACAAGCAGTATTACATATAGGAGGT +
Preference number: 3 (lower is better)
Translates to: FICLYKRVNSYP*PGPQAVLHIGG
Trigger: ACCTCCTATATGTAATACTGCTTGTGGGCCTGGCCAGGGATAAGAGTTCACTCTTTTGTACAGGCAAATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR-3UTR CAA 90 bp CAGATAGCTATTCTGAGCTTGGTTAACTTCAGTCCATCTGGAAAAGATTTTTGGATGAGAATTTATGGTTaGCAGGGCATGACTCCCCAG +
Preference number: 3 (lower is better)
Translates to: QIAILSLVNFSPSGKDFWMRIYG*QGMTPQ
Trigger: CTGGGGAGTCATGCCCTGCAAACCATAAATTCTCAT...CCAAAAATCTTTTCCAGATGGACTGAAGTTAACCAAGCTCAGAATAGCTATCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR-3UTR CAA 90 bp CAGATAGCTATTCTGAGCTTGGTTAACTTCAGTCCATCTGGAAAAGATTTTTGGATATGGGTGCACCTGTaGGCTGAGACTGATATGTCT +
Preference number: 3 (lower is better)
Translates to: QIAILSLVNFSPSGKDFWIWVHL*AETDMS
Trigger: AGACATATCAGTCTCAGCCAACAGGTGCACCCATAT...CCAAAAATCTTTTCCAGATGGACTGAAGTTAACCAAGCTCAGAATAGCTATCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR TCA 72 bp TTCTTATCAGACTTAAAAGGGTGCCTGGCTCTTAGTTaGTTATCTCCTAGATCAGGGAAGGAAGGAAGGAAA +
Preference number: 3 (lower is better)
Translates to: FLSDLKGCLALS*LSPRSGKEGRK
Trigger: TTTCCTTCCTTCCTTCCCTGATCTAGGAGATAATCAACTAAGAGCCAGGCACCCTTTTAAGTCTGATAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR CCA 72 bp AAGGCGGGACAACTCAAATTGGAGACTTCCAGGCTATaGGTAAATTTAAACATTTTCTGGCAGACAATTGGT +
Preference number: 3 (lower is better)
Translates to: KAGQLKLETSRL*VNLNIFWQTIG
Trigger: ACCAATTGTCTGCCAGAAAATGTTTAAATTTACCCATAGCCTGGAAGTCTCCAATTTGAGTTGTCCCGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR CCA 72 bp GTAAAAGTTCCAAGCCATGAATGCAAGAGACCGGTGTaGCTATTTATTTGCCTGTACAAAAGAGTGAACTCT +
Preference number: 3 (lower is better)
Translates to: VKVPSHECKRPV*LFICLYKRVNS
Trigger: AGAGTTCACTCTTTTGTACAGGCAAATAAATAGCCACACCGGTCTCTTGCATTCATGGCTTGGAACTTTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR-3UTR CAA 90 bp CAGATAGCTATTCTGAGCTTGGTTAACTTCAGTCCATCTGGAAAAGATTTTTGGGGAGACCAAGTTTTATaGTGCAGAAGAAGCTCTCAG +
Preference number: 3 (lower is better)
Translates to: QIAILSLVNFSPSGKDFWGDQVL*CRRSSQ
Trigger: CTGAGAGCTTCTTCTGCACAATAAAACTTGGTCTCC...CCAAAAATCTTTTCCAGATGGACTGAAGTTAACCAAGCTCAGAATAGCTATCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR-3UTR CAA 90 bp CAGATAGCTATTCTGAGCTTGGTTAACTTCAGTCCATCTGGAAAAGATTTTTGGCTCCAGCACTGGAGATaGCAATTAAACATGAGATGT +
Preference number: 3 (lower is better)
Translates to: QIAILSLVNFSPSGKDFWLQHWR*QLNMRC
Trigger: ACATCTCATGTTTAATTGCAATCTCCAGTGCTGGAG...CCAAAAATCTTTTCCAGATGGACTGAAGTTAACCAAGCTCAGAATAGCTATCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR TCA 72 bp CAACTAGATACTGCCAGCCATTTGGTCTGGCAATTCTaGAGAGAGATGCTGCTATATCTAGTTTGTAAAAGT +
Preference number: 3 (lower is better)
Translates to: QLDTASHLVWQF*REMLLYLVCKS
Trigger: ACTTTTACAAACTAGATATAGCAGCATCTCTCTTCAGAATTGCCAGACCAAATGGCTGGCAGTATCTAGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR TCA 72 bp TGGCGTAAGTTCAAGCTTGGCAGCTTTGTTCTTCACTaGAAATTAAATCTGTCATTCTGGCTTATGCAGATA +
Preference number: 3 (lower is better)
Translates to: WRKFKLGSFVLH*KLNLSFWLMQI
Trigger: TATCTGCATAAGCCAGAATGACAGATTTAATTTTCAGTGAAGAACAAAGCTGCCAAGCTTGAACTTACGCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR GCA 72 bp TTAACTTCAGTCCATCTGGAAAAGATTTTTGGAAGTTaGAAACATGAGTGCCACACCCTAGATGATGGTAAT +
Preference number: 3 (lower is better)
Translates to: LTSVHLEKIFGS*KHECHTLDDGN
Trigger: ATTACCATCATCTAGGGTGTGGCACTCATGTTTGCAACTTCCAAAAATCTTTTCCAGATGGACTGAAGTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR CCA 72 bp CAGCACTGGAGATTGCAATTAAACATGAGATGTGAATaGGGACAAATATCCAAATTCTATCAAGGCCCAAAT +
Preference number: 3 (lower is better)
Translates to: QHWRLQLNMRCE*GQISKFYQGPN
Trigger: ATTTGGGCCTTGATAGAATTTGGATATTTGTCCCCATTCACATCTCATGTTTAATTGCAATCTCCAGTGCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR CCA 72 bp GCTATGGGTAAATTTAAACATTTTCTGGCAGACAATTaGTTGAGTTCGTCTGAAGACCTGGGATTAATGGAA +
Preference number: 3 (lower is better)
Translates to: AMGKFKHFLADN*LSSSEDLGLME
Trigger: TTCCATTAATCCCAGGTCTTCAGACGAACTCAACCAATTGTCTGCCAGAAAATGTTTAAATTTACCCATAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR TCA 72 bp AGGGAGATCCAGATTCATTATCTAGACACAAGCAAGTaGAATACAAATGATTCCTCATTTCTGTGGATGATC +
Preference number: 3 (lower is better)
Translates to: REIQIHYLDTSK*NTNDSSFLWMI
Trigger: GATCATCCACAGAAATGAGGAATCATTTGTATTTCACTTGCTTGTGTCTAGATAATGAATCTGGATCTCCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CCA 90 bp AAAGGGGGAGCAGGTACATCACATGACAAAAGCAGGAGCAAGAGAGAGAGGCAGACAGGCCAGGAACAGTaGCTCACTCCCAGCACTTTG +
Preference number: 4 (lower is better)
Translates to: KGGAGTSHDKSRSKRERQTGQEQ*LTPSTL
Trigger: CAAAGTGCTGGGAGTGAGCCACTGTTCCTGGCCTGT...CTGCCTCTCTCTCTTGCTCCTGCTTTTGTCATGTGATGTACCTGCTCCCCCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS-3UTR CCA 90 bp AAAGGGGGAGCAGGTACATCACATGACAAAAGCAGGAGCAAGAGAGAGAGGCAGGTGGGATGGCAGAACTaGTTGAGCCAGTTAACGGGT +
Preference number: 4 (lower is better)
Translates to: KGGAGTSHDKSRSKRERQVGWQN*LSQLTG
Trigger: ACCCGTTAACTGGCTCAACCAGTTCTGCCATCCCAC...CTGCCTCTCTCTCTTGCTCCTGCTTTTGTCATGTGATGTACCTGCTCCCCCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS-3UTR TCA 90 bp AAAGGGGGAGCAGGTACATCACATGACAAAAGCAGGAGCAAGAGAGAGAGGCAGGCCTGTACAAAAGAGTaGACTCTTATCCCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: KGGAGTSHDKSRSKRERQACTKE*TLIPGQ
Trigger: CTGGCCAGGGATAAGAGTTCACTCTTTTGTACAGGC...CTGCCTCTCTCTCTTGCTCCTGCTTTTGTCATGTGATGTACCTGCTCCCCCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR TCA 90 bp AAAGGGGGAGCAGGTACATCACATGACAAAAGCAGGAGCAAGAGAGAGAGGCAGTGGGAGTCAGAAGCCTaGGTTTTGTCTTCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: KGGAGTSHDKSRSKRERQWESEA*VLSSAP
Trigger: TGGAGCTGAAGACAAAACTCAGGCTTCTGACTCCCA...CTGCCTCTCTCTCTTGCTCCTGCTTTTGTCATGTGATGTACCTGCTCCCCCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641361.1
ENST00000641673.1
CDS-3UTR TCA 90 bp CAAGAACTCACTATCATGAATACAACACCAACCCATGAGAGATCCACCCCCATATGCACTCCAACCTGGTaGCCGAGCGAGACTCCGTCT +
Preference number: 4 (lower is better)
Translates to: QELTIMNTTPTHERSTPICTPTW*PSETPS
Trigger: AGACGGAGTCTCGCTCGGTCACCAGGTTGGAGTGCA...TATGGGGGTGGATCTCTCATGGGTTGGTGTTGTATTCATGATAGTGAGTTCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS-3UTR GCA 90 bp AAAGGGGGAGCAGGTACATCACATGACAAAAGCAGGAGCAAGAGAGAGAGGCAGATCTGCATTTCCCACTaGTCCATGGCTGGTTTCTCG +
Preference number: 4 (lower is better)
Translates to: KGGAGTSHDKSRSKRERQICISH*SMAGFS
Trigger: CGAGAAACCAGCCATGGAGCAGTGGGAAATGCAGAT...CTGCCTCTCTCTCTTGCTCCTGCTTTTGTCATGTGATGTACCTGCTCCCCCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR GCA 90 bp AAAGGGGGAGCAGGTACATCACATGACAAAAGCAGGAGCAAGAGAGAGAGGCAGGCTGATGGAAGAACGTaGTGGCATACATGGCGTATC +
Preference number: 4 (lower is better)
Translates to: KGGAGTSHDKSRSKRERQADGRT*WHTWRI
Trigger: GATACGCCATGTATGCCAGCACGTTCTTCCATCAGC...CTGCCTCTCTCTCTTGCTCCTGCTTTTGTCATGTGATGTACCTGCTCCCCCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR GCA 90 bp AAAGGGGGAGCAGGTACATCACATGACAAAAGCAGGAGCAAGAGAGAGAGGCAGTCCCCGGGTCCCAGCTaGCGGTTTATTTATAGAATG +
Preference number: 4 (lower is better)
Translates to: KGGAGTSHDKSRSKRERQSPGPS*RFIYRM
Trigger: CATTCTATAAATAAACCGGCAGCTGGGACCCGGGGA...CTGCCTCTCTCTCTTGCTCCTGCTTTTGTCATGTGATGTACCTGCTCCCCCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CCA 90 bp AAAGGGGGAGCAGGTACATCACATGACAAAAGCAGGAGCAAGAGAGAGAGGCAGCGGGGTCCCTTTCCATaGCTTTCCTCATGGCATTTT +
Preference number: 4 (lower is better)
Translates to: KGGAGTSHDKSRSKRERQRGPFP*LSSWHF
Trigger: AAAATGCCATGAGGAAAGCCATGGAAAGGGACCCCG...CTGCCTCTCTCTCTTGCTCCTGCTTTTGTCATGTGATGTACCTGCTCCCCCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CCA 90 bp AAAGGGGGAGCAGGTACATCACATGACAAAAGCAGGAGCAAGAGAGAGAGGCAGGCTTTACAGGAAGCATaGTGCTGGCATCAGCTTAGC +
Preference number: 4 (lower is better)
Translates to: KGGAGTSHDKSRSKRERQALQEA*CWHQLS
Trigger: GCTAAGCTGATGCCAGCACCATGCTTCCTGTAAAGC...CTGCCTCTCTCTCTTGCTCCTGCTTTTGTCATGTGATGTACCTGCTCCCCCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CCA 90 bp AAAGGGGGAGCAGGTACATCACATGACAAAAGCAGGAGCAAGAGAGAGAGGCAGGATGGAAGAACGTGCTaGCATACATGGCGTATCACC +
Preference number: 4 (lower is better)
Translates to: KGGAGTSHDKSRSKRERQDGRTC*HTWRIT
Trigger: GGTGATACGCCATGTATGCCAGCACGTTCTTCCATC...CTGCCTCTCTCTCTTGCTCCTGCTTTTGTCATGTGATGTACCTGCTCCCCCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CCA 90 bp AAAGGGGGAGCAGGTACATCACATGACAAAAGCAGGAGCAAGAGAGAGAGGCAGGTTAACGGGTCTGGGTaGTGTCAGCTGATCCATCTA +
Preference number: 4 (lower is better)
Translates to: KGGAGTSHDKSRSKRERQVNGSG*CQLIHL
Trigger: TAGATGGATCAGCTGACACCACCCAGACCCGTTAAC...CTGCCTCTCTCTCTTGCTCCTGCTTTTGTCATGTGATGTACCTGCTCCCCCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS-3UTR TCA 90 bp AAAGGGGGAGCAGGTACATCACATGACAAAAGCAGGAGCAAGAGAGAGAGGCAGCAGAAGACAAAGTACTaGGTGGCACAGCCAACAAAG +
Preference number: 4 (lower is better)
Translates to: KGGAGTSHDKSRSKRERQQKTKY*VAQPTK
Trigger: CTTTGTTGGCTGTGCCACTCAGTACTTTGTCTTCTG...CTGCCTCTCTCTCTTGCTCCTGCTTTTGTCATGTGATGTACCTGCTCCCCCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR TCA 90 bp TGGCTATTTATTTGCCTGTACAAAAGAGTGAACTCTTATCCCTGGCCAGGCCCAATGAATGGTCCACCGTaGGAAATCCCGGGGTCCCTT +
Preference number: 4 (lower is better)
Translates to: WLFICLYKRVNSYPWPGPMNGPP*EIPGSL
Trigger: AAGGGACCCCGGGATTTCTCACGGTGGACCATTCAT...TGGGCCTGGCCAGGGATAAGAGTTCACTCTTTTGTACAGGCAAATAAATAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR GCA 90 bp AAAGGGGGAGCAGGTACATCACATGACAAAAGCAGGAGCAAGAGAGAGAGGCAGTGTAAAGCAAGGGGTTaGAGATTGCAGCATACCGGT +
Preference number: 4 (lower is better)
Translates to: KGGAGTSHDKSRSKRERQCKARG*RLQHTG
Trigger: ACCGGTATGCTGCAATCTGCAACCCCTTGCTTTACA...CTGCCTCTCTCTCTTGCTCCTGCTTTTGTCATGTGATGTACCTGCTCCCCCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR GCA 90 bp AAAGGGGGAGCAGGTACATCACATGACAAAAGCAGGAGCAAGAGAGAGAGGCAGACATGGGAAGGTATCTaGCCTGTGGTTTTCATGAGC +
Preference number: 4 (lower is better)
Translates to: KGGAGTSHDKSRSKRERQTWEGI*PVVFMS
Trigger: GCTCATGAAAACCACAGGGCAGATACCTTCCCATGT...CTGCCTCTCTCTCTTGCTCCTGCTTTTGTCATGTGATGTACCTGCTCCCCCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR GCA 90 bp AAAGGGGGAGCAGGTACATCACATGACAAAAGCAGGAGCAAGAGAGAGAGGCAGGCGTATCACCTTACATaGAAGATAGTCAGGTTGCCC +
Preference number: 4 (lower is better)
Translates to: KGGAGTSHDKSRSKRERQAYHLT*KIVRLP
Trigger: GGGCAACCTGACTATCTTGCATGTAAGGTGATACGC...CTGCCTCTCTCTCTTGCTCCTGCTTTTGTCATGTGATGTACCTGCTCCCCCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR GCA 90 bp AAAGGGGGAGCAGGTACATCACATGACAAAAGCAGGAGCAAGAGAGAGAGGCAGGGCCTGGGACATAGGTaGCCACTAAATATTTTGCTG +
Preference number: 4 (lower is better)
Translates to: KGGAGTSHDKSRSKRERQGLGHR*PLNILL
Trigger: CAGCAAAATATTTAGTGGGCACCTATGTCCCAGGCC...CTGCCTCTCTCTCTTGCTCCTGCTTTTGTCATGTGATGTACCTGCTCCCCCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS-3UTR CCA 90 bp AAAGGGGGAGCAGGTACATCACATGACAAAAGCAGGAGCAAGAGAGAGAGGCAGCCACTGCTCCATGGCTaGTTTCTCGTTCCATCAATT +
Preference number: 4 (lower is better)
Translates to: KGGAGTSHDKSRSKRERQPLLHG*FLVPSI
Trigger: AATTGATGGAACGAGAAACCAGCCATGGAGCAGTGG...CTGCCTCTCTCTCTTGCTCCTGCTTTTGTCATGTGATGTACCTGCTCCCCCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CCA 90 bp AAAGGGGGAGCAGGTACATCACATGACAAAAGCAGGAGCAAGAGAGAGAGGCAGGTCAATATAAACACCTaGCTTATCATCCCCAGGGGG +
Preference number: 4 (lower is better)
Translates to: KGGAGTSHDKSRSKRERQVNINT*LIIPRG
Trigger: CCCCCTGGGGATGATAAGCCAGGTGTTTATATTGAC...CTGCCTCTCTCTCTTGCTCCTGCTTTTGTCATGTGATGTACCTGCTCCCCCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CCA 90 bp TGGCTATTTATTTGCCTGTACAAAAGAGTGAACTCTTATCCCTGGCCAGGCCCAGTAGTTCCAGCTACTTaGAAGGCTGAGGTGAGGGGG +
Preference number: 4 (lower is better)
Translates to: WLFICLYKRVNSYPWPGPVVPAT*KAEVRG
Trigger: CCCCCTCACCTCAGCCTTCCAAGTAGCTGGAACTAC...TGGGCCTGGCCAGGGATAAGAGTTCACTCTTTTGTACAGGCAAATAAATAGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS-3UTR TCA 90 bp AAAGGGGGAGCAGGTACATCACATGACAAAAGCAGGAGCAAGAGAGAGAGGCAGCATTTGAGGATGGTCTaGAAGTCCCAGGAGAATGAA +
Preference number: 4 (lower is better)
Translates to: KGGAGTSHDKSRSKRERQHLRMV*KSQENE
Trigger: TTCATTCTCCTGGGACTTTCAGACCATCCTCAAATG...CTGCCTCTCTCTCTTGCTCCTGCTTTTGTCATGTGATGTACCTGCTCCCCCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR TCA 90 bp AAAGGGGGAGCAGGTACATCACATGACAAAAGCAGGAGCAAGAGAGAGAGGCAGTGTAACCATAAGAGATaGGGACCACTAGCACAGACA +
Preference number: 4 (lower is better)
Translates to: KGGAGTSHDKSRSKRERQCNHKR*GPLAQT
Trigger: TGTCTGTGCTAGTGGTCCTCATCTCTTATGGTTACA...CTGCCTCTCTCTCTTGCTCCTGCTTTTGTCATGTGATGTACCTGCTCCCCCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR TCA 90 bp AAAGGGGGAGCAGGTACATCACATGACAAAAGCAGGAGCAAGAGAGAGAGGCAGTGGGTCGCATGTACATaGAGAATCCAGAACCATAGA +
Preference number: 4 (lower is better)
Translates to: KGGAGTSHDKSRSKRERQWVACT*RIQNHR
Trigger: TCTATGGTTCTGGATTCTTCATGTACATGCGACCCA...CTGCCTCTCTCTCTTGCTCCTGCTTTTGTCATGTGATGTACCTGCTCCCCCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR TCA 90 bp AAAGGGGGAGCAGGTACATCACATGACAAAAGCAGGAGCAAGAGAGAGAGGCAGGGGTGTATCAGGAACTaGTCCACTTTATCAGCTTTG +
Preference number: 4 (lower is better)
Translates to: KGGAGTSHDKSRSKRERQGCIRN*STLSAL
Trigger: CAAAGCTGATAAAGTGGATCAGTTCCTGATACACCC...CTGCCTCTCTCTCTTGCTCCTGCTTTTGTCATGTGATGTACCTGCTCCCCCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR TCA 90 bp AAAGGGGGAGCAGGTACATCACATGACAAAAGCAGGAGCAAGAGAGAGAGGCAGCATCCCCAGGGGGTTTaGAAATGTTATAGACATGAG +
Preference number: 4 (lower is better)
Translates to: KGGAGTSHDKSRSKRERQHPQGV*KCYRHE
Trigger: CTCATGTCTATAACATTTTCAAACCCCCTGGGGATG...CTGCCTCTCTCTCTTGCTCCTGCTTTTGTCATGTGATGTACCTGCTCCCCCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR TCA 90 bp TGGCTATTTATTTGCCTGTACAAAAGAGTGAACTCTTATCCCTGGCCAGGCCCATTCTCTGTTTTTCTATaGGGTCTCCCCGGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: WLFICLYKRVNSYPWPGPFSVFL*GLPGSQ
Trigger: CTGGGACCCGGGGAGACCTCATAGAAAAACAGAGAA...TGGGCCTGGCCAGGGATAAGAGTTCACTCTTTTGTACAGGCAAATAAATAGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR TCA 90 bp CAAGAACTCACTATCATGAATACAACACCAACCCATGAGAGATCCACCCCCATAAGGTCTAGGCTGCAGTaGGCCATGACCATGACTGTG +
Preference number: 4 (lower is better)
Translates to: QELTIMNTTPTHERSTPIRSRLQ*AMTMTV
Trigger: CACAGTCATGGTCATGGCTCACTGCAGCCTAGACCT...TATGGGGGTGGATCTCTCATGGGTTGGTGTTGTATTCATGATAGTGAGTTCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS-3UTR GCA 90 bp TGGCTATTTATTTGCCTGTACAAAAGAGTGAACTCTTATCCCTGGCCAGGCCCACAAGGGGTTGCAGATTaGAGCATACCGGTCATAGGC +
Preference number: 4 (lower is better)
Translates to: WLFICLYKRVNSYPWPGPQGVAD*SIPVIG
Trigger: GCCTATGACCGGTATGCTGCAATCTGCAACCCCTTG...TGGGCCTGGCCAGGGATAAGAGTTCACTCTTTTGTACAGGCAAATAAATAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR GCA 90 bp AAAGGGGGAGCAGGTACATCACATGACAAAAGCAGGAGCAAGAGAGAGAGGCAGTCTTCAACTAGATACTaGCAGCCATTTGGTCTGGCA +
Preference number: 4 (lower is better)
Translates to: KGGAGTSHDKSRSKRERQSSTRY*QPFGLA
Trigger: TGCCAGACCAAATGGCTGGCAGTATCTAGTTGAAGA...CTGCCTCTCTCTCTTGCTCCTGCTTTTGTCATGTGATGTACCTGCTCCCCCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CCA 90 bp AAAGGGGGAGCAGGTACATCACATGACAAAAGCAGGAGCAAGAGAGAGAGGCAGATTTCTGGATTGCATTaGGCAGAAGGGTCCTGCAAT +
Preference number: 4 (lower is better)
Translates to: KGGAGTSHDKSRSKRERQISGLH*AEGSCN
Trigger: ATTGCAGGACCCTTCTGCCCAATGCAATCCAGAAAT...CTGCCTCTCTCTCTTGCTCCTGCTTTTGTCATGTGATGTACCTGCTCCCCCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302040.6
CDS-3UTR CCA 90 bp AAAGGGGGAGCAGGTACATCACATGACAAAAGCAGGAGCAAGAGAGAGAGGCAGCATGATTCTGAAACATaGGAAGGTATCTGCCCTGTG +
Preference number: 4 (lower is better)
Translates to: KGGAGTSHDKSRSKRERQHDSET*EGICPV
Trigger: CACAGGGCAGATACCTTCCCATGTTTCAGAATCATG...CTGCCTCTCTCTCTTGCTCCTGCTTTTGTCATGTGATGTACCTGCTCCCCCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CCA 90 bp TGGCTATTTATTTGCCTGTACAAAAGAGTGAACTCTTATCCCTGGCCAGGCCCAAGAGGAGAGAGAAAGTaGCAGGGGATTGGTGGGAGT +
Preference number: 4 (lower is better)
Translates to: WLFICLYKRVNSYPWPGPRGERK*QGIGGS
Trigger: ACTCCCACCAATCCCCTGCCACTTTCTCTCTCCTCT...TGGGCCTGGCCAGGGATAAGAGTTCACTCTTTTGTACAGGCAAATAAATAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CCA 90 bp TGGCTATTTATTTGCCTGTACAAAAGAGTGAACTCTTATCCCTGGCCAGGCCCAGTGAACTCTTATCCCTaGCCAGGCCCACAAGCAGTA +
Preference number: 4 (lower is better)
Translates to: WLFICLYKRVNSYPWPGPVNSYP*PGPQAV
Trigger: TACTGCTTGTGGGCCTGGCCAGGGATAAGAGTTCAC...TGGGCCTGGCCAGGGATAAGAGTTCACTCTTTTGTACAGGCAAATAAATAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CCA 90 bp AAAGGGGGAGCAGGTACATCACATGACAAAAGCAGGAGCAAGAGAGAGAGGCAGTGCAAGAGACCGGTGTaGCTATTTATTTGCCTGTAC +
Preference number: 4 (lower is better)
Translates to: KGGAGTSHDKSRSKRERQCKRPV*LFICLY
Trigger: GTACAGGCAAATAAATAGCCACACCGGTCTCTTGCA...CTGCCTCTCTCTCTTGCTCCTGCTTTTGTCATGTGATGTACCTGCTCCCCCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CCA 90 bp AAAGGGGGAGCAGGTACATCACATGACAAAAGCAGGAGCAAGAGAGAGAGGCAGATACTGCCAGCCATTTaGTCTGGCAATTCTGAAGAG +
Preference number: 4 (lower is better)
Translates to: KGGAGTSHDKSRSKRERQILPAI*SGNSEE
Trigger: CTCTTCAGAATTGCCAGACCAAATGGCTGGCAGTAT...CTGCCTCTCTCTCTTGCTCCTGCTTTTGTCATGTGATGTACCTGCTCCCCCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR TCA 90 bp AAAGGGGGAGCAGGTACATCACATGACAAAAGCAGGAGCAAGAGAGAGAGGCAGAGGAAAATCTTCATTTaGGGATGGTCTGAAAGTCCC +
Preference number: 4 (lower is better)
Translates to: KGGAGTSHDKSRSKRERQRKIFI*GWSESP
Trigger: GGGACTTTCAGACCATCCTCAAATGAAGATTTTCCT...CTGCCTCTCTCTCTTGCTCCTGCTTTTGTCATGTGATGTACCTGCTCCCCCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR TCA 90 bp TATGCCAGGCACTGGGCTAAGCCCTCTTTATGCATATTCTCACTTAATTGTTGTTCACCACCTCGCTGGTaGAGGTATCAGAGCAGGACA +
Preference number: 4 (lower is better)
Translates to: YARHWAKPSLCIFSLNCCSPPRW*RYQSRT
Trigger: TGTCCTGCTCTGATACCTTCACCAGCGAGGTGGTGA...ACAACAATTAAGTGAGAATATGCATAAAGAGGGCTTAGCCCAGTGCCTGGCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR TCA 90 bp TATGCCAGGCACTGGGCTAAGCCCTCTTTATGCATATTCTCACTTAATTGTTGTATGAATGGTCCACCGTaGGAAATCCCGGGGTCCCTT +
Preference number: 4 (lower is better)
Translates to: YARHWAKPSLCIFSLNCCMNGPP*EIPGSL
Trigger: AAGGGACCCCGGGATTTCTCACGGTGGACCATTCAT...ACAACAATTAAGTGAGAATATGCATAAAGAGGGCTTAGCCCAGTGCCTGGCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR TCA 90 bp CAAGAACTCACTATCATGAATACAACACCAACCCATGAGAGATCCACCCCCATAAGTCACGGATCAAGCTaGTGGAAGAACGTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: QELTIMNTTPTHERSTPISHGSS*WKNVLA
Trigger: TGCCAGCACGTTCTTCCATCAGCTTGATCCGTGACT...TATGGGGGTGGATCTCTCATGGGTTGGTGTTGTATTCATGATAGTGAGTTCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR TCA 90 bp TGGCTATTTATTTGCCTGTACAAAAGAGTGAACTCTTATCCCTGGCCAGGCCCAGCCTGTACAAAAGAGTaGACTCTTATCCCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: WLFICLYKRVNSYPWPGPACTKE*TLIPGQ
Trigger: CTGGCCAGGGATAAGAGTTCACTCTTTTGTACAGGC...TGGGCCTGGCCAGGGATAAGAGTTCACTCTTTTGTACAGGCAAATAAATAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR TCA 90 bp AAAGGGGGAGCAGGTACATCACATGACAAAAGCAGGAGCAAGAGAGAGAGGCAGTTGGTCTGGCAATTCTaGAGAGAGATGCTGCTATAT +
Preference number: 4 (lower is better)
Translates to: KGGAGTSHDKSRSKRERQLVWQF*REMLLY
Trigger: ATATAGCAGCATCTCTCTTCAGAATTGCCAGACCAA...CTGCCTCTCTCTCTTGCTCCTGCTTTTGTCATGTGATGTACCTGCTCCCCCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR TCA 90 bp CAAGAACTCACTATCATGAATACAACACCAACCCATGAGAGATCCACCCCCATATTCTCTGTTTTTCTATaGGGTCTCCCCGGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: QELTIMNTTPTHERSTPIFSVFL*GLPGSQ
Trigger: CTGGGACCCGGGGAGACCTCATAGAAAAACAGAGAA...TATGGGGGTGGATCTCTCATGGGTTGGTGTTGTATTCATGATAGTGAGTTCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR TCA 90 bp TGGCTATTTATTTGCCTGTACAAAAGAGTGAACTCTTATCCCTGGCCAGGCCCAGAGGCAGAAATGCCCTaGGAAAGACTCAGTGGTGAA +
Preference number: 4 (lower is better)
Translates to: WLFICLYKRVNSYPWPGPEAEMP*ERLSGE
Trigger: TTCACCACTGAGTCTTTCTCAGGGCATTTCTGCCTC...TGGGCCTGGCCAGGGATAAGAGTTCACTCTTTTGTACAGGCAAATAAATAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS-3UTR GCA 90 bp AAAGGGGGAGCAGGTACATCACATGACAAAAGCAGGAGCAAGAGAGAGAGGCAGGTAAATAGTAAACCATaGTTCTGGAATCTCCGCTCC +
Preference number: 4 (lower is better)
Translates to: KGGAGTSHDKSRSKRERQVNSKP*FWNLRS
Trigger: GGAGCGGAGATTCCAGAAGCATGGTTTACTATTTAC...CTGCCTCTCTCTCTTGCTCCTGCTTTTGTCATGTGATGTACCTGCTCCCCCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR GCA 90 bp TGGCTATTTATTTGCCTGTACAAAAGAGTGAACTCTTATCCCTGGCCAGGCCCAATCTGCATTTCCCACTaGTCCATGGCTGGTTTCTCG +
Preference number: 4 (lower is better)
Translates to: WLFICLYKRVNSYPWPGPICISH*SMAGFS
Trigger: CGAGAAACCAGCCATGGAGCAGTGGGAAATGCAGAT...TGGGCCTGGCCAGGGATAAGAGTTCACTCTTTTGTACAGGCAAATAAATAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR GCA 90 bp TGGCTATTTATTTGCCTGTACAAAAGAGTGAACTCTTATCCCTGGCCAGGCCCATGGGCAGAAGGGTCCTaGAATCTTGTGCTACAAGAG +
Preference number: 4 (lower is better)
Translates to: WLFICLYKRVNSYPWPGPWAEGS*NLVLQE
Trigger: CTCTTGTAGCACAAGATTGCAGGACCCTTCTGCCCA...TGGGCCTGGCCAGGGATAAGAGTTCACTCTTTTGTACAGGCAAATAAATAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR GCA 90 bp TGGCTATTTATTTGCCTGTACAAAAGAGTGAACTCTTATCCCTGGCCAGGCCCAGTTCCAAGCCATGAATaGAAGAGACCGGTGTGGCTA +
Preference number: 4 (lower is better)
Translates to: WLFICLYKRVNSYPWPGPVPSHE*KRPVWL
Trigger: TAGCCACACCGGTCTCTTGCATTCATGGCTTGGAAC...TGGGCCTGGCCAGGGATAAGAGTTCACTCTTTTGTACAGGCAAATAAATAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CCA 90 bp TGGCTATTTATTTGCCTGTACAAAAGAGTGAACTCTTATCCCTGGCCAGGCCCATTTCCCACTGCTCCATaGCTGGTTTCTCGTTCCATC +
Preference number: 4 (lower is better)
Translates to: WLFICLYKRVNSYPWPGPFPTAP*LVSRSI
Trigger: GATGGAACGAGAAACCAGCCATGGAGCAGTGGGAAA...TGGGCCTGGCCAGGGATAAGAGTTCACTCTTTTGTACAGGCAAATAAATAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CCA 90 bp AAAGGGGGAGCAGGTACATCACATGACAAAAGCAGGAGCAAGAGAGAGAGGCAGAGACAAAGTACTGAGTaGCACAGCCAACAAAGGAAA +
Preference number: 4 (lower is better)
Translates to: KGGAGTSHDKSRSKRERQRQSTE*HSQQRK
Trigger: TTTCCTTTGTTGGCTGTGCCACTCAGTACTTTGTCT...CTGCCTCTCTCTCTTGCTCCTGCTTTTGTCATGTGATGTACCTGCTCCCCCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CCA 90 bp CAAGAACTCACTATCATGAATACAACACCAACCCATGAGAGATCCACCCCCATAAGAGGAGAGAGAAAGTaGCAGGGGATTGGTGGGAGT +
Preference number: 4 (lower is better)
Translates to: QELTIMNTTPTHERSTPIRGERK*QGIGGS
Trigger: ACTCCCACCAATCCCCTGCCACTTTCTCTCTCCTCT...TATGGGGGTGGATCTCTCATGGGTTGGTGTTGTATTCATGATAGTGAGTTCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR TCA 90 bp TGGCTATTTATTTGCCTGTACAAAAGAGTGAACTCTTATCCCTGGCCAGGCCCACAGAAGACAAAGTACTaGGTGGCACAGCCAACAAAG +
Preference number: 4 (lower is better)
Translates to: WLFICLYKRVNSYPWPGPQKTKY*VAQPTK
Trigger: CTTTGTTGGCTGTGCCACTCAGTACTTTGTCTTCTG...TGGGCCTGGCCAGGGATAAGAGTTCACTCTTTTGTACAGGCAAATAAATAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR TCA 90 bp CAAGAACTCACTATCATGAATACAACACCAACCCATGAGAGATCCACCCCCATATGTCCTACCTGTAGCTaGGCTGATCTTCACAACAGC +
Preference number: 4 (lower is better)
Translates to: QELTIMNTTPTHERSTPICPTCS*ADLHNS
Trigger: GCTGTTGTGAAGATCAGCTCAGCTACAGGTAGGACA...TATGGGGGTGGATCTCTCATGGGTTGGTGTTGTATTCATGATAGTGAGTTCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR TCA 90 bp AAAGGGGGAGCAGGTACATCACATGACAAAAGCAGGAGCAAGAGAGAGAGGCAGTTATCAGCTTTGCTGTaGTCCCTTTCTCTCCAAATA +
Preference number: 4 (lower is better)
Translates to: KGGAGTSHDKSRSKRERQLSALL*SLSLQI
Trigger: TATTTGGAGAGAAAGGGATCACAGCAAAGCTGATAA...CTGCCTCTCTCTCTTGCTCCTGCTTTTGTCATGTGATGTACCTGCTCCCCCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR TCA 90 bp AAAGGGGGAGCAGGTACATCACATGACAAAAGCAGGAGCAAGAGAGAGAGGCAGCAAGCTCTAGGTTTGTaGAGGTTTAAGACTAGAAAC +
Preference number: 4 (lower is better)
Translates to: KGGAGTSHDKSRSKRERQQALGL*RFKTRN
Trigger: GTTTCTAGTCTTAAACCTTCACAAACCTAGAGCTTG...CTGCCTCTCTCTCTTGCTCCTGCTTTTGTCATGTGATGTACCTGCTCCCCCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR TCA 90 bp TGGCTATTTATTTGCCTGTACAAAAGAGTGAACTCTTATCCCTGGCCAGGCCCACCTCATTTCTGTGGATaGTCACAGAGTAGGCAAGCT +
Preference number: 4 (lower is better)
Translates to: WLFICLYKRVNSYPWPGPPHFCG*SQSRQA
Trigger: AGCTTGCCTACTCTGTGATCATCCACAGAAATGAGG...TGGGCCTGGCCAGGGATAAGAGTTCACTCTTTTGTACAGGCAAATAAATAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR TCA 90 bp AAAGGGGGAGCAGGTACATCACATGACAAAAGCAGGAGCAAGAGAGAGAGGCAGAGAAGAACGTGGCTTTaGACACAAGATGAATTCTCT +
Preference number: 4 (lower is better)
Translates to: KGGAGTSHDKSRSKRERQRRTWL*TQDEFS
Trigger: AGAGAATTCATCTTGTGTTCAAAGCCACGTTCTTCT...CTGCCTCTCTCTCTTGCTCCTGCTTTTGTCATGTGATGTACCTGCTCCCCCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR TCA 90 bp TGGCTATTTATTTGCCTGTACAAAAGAGTGAACTCTTATCCCTGGCCAGGCCCAGAGTCAGAGGCTGCATaGCCCCTAAACAGTAATTTC +
Preference number: 4 (lower is better)
Translates to: WLFICLYKRVNSYPWPGPESEAA*PLNSNF
Trigger: GAAATTACTGTTTAGGGGTCATGCAGCCTCTGACTC...TGGGCCTGGCCAGGGATAAGAGTTCACTCTTTTGTACAGGCAAATAAATAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS-3UTR TCA 90 bp CAGATAGCTATTCTGAGCTTGGTTAACTTCAGTCCATCTGGAAAAGATTTTTGGGAGGTTGCAGTGAGCTaGGATCGCATGCCACTGCAC +
Preference number: 4 (lower is better)
Translates to: QIAILSLVNFSPSGKDFWEVAVS*DRMPLH
Trigger: GTGCAGTGGCATGCGATCTCAGCTCACTGCAACCTC...CCAAAAATCTTTTCCAGATGGACTGAAGTTAACCAAGCTCAGAATAGCTATCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS-3UTR GCA 90 bp CAAGAACTCACTATCATGAATACAACACCAACCCATGAGAGATCCACCCCCATATGGGCAGAAGGGTCCTaGAATCTTGTGCTACAAGAG +
Preference number: 4 (lower is better)
Translates to: QELTIMNTTPTHERSTPIWAEGS*NLVLQE
Trigger: CTCTTGTAGCACAAGATTGCAGGACCCTTCTGCCCA...TATGGGGGTGGATCTCTCATGGGTTGGTGTTGTATTCATGATAGTGAGTTCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR GCA 90 bp TATGCCAGGCACTGGGCTAAGCCCTCTTTATGCATATTCTCACTTAATTGTTGTCAAGGGGTTGCAGATTaGAGCATACCGGTCATAGGC +
Preference number: 4 (lower is better)
Translates to: YARHWAKPSLCIFSLNCCQGVAD*SIPVIG
Trigger: GCCTATGACCGGTATGCTGCAATCTGCAACCCCTTG...ACAACAATTAAGTGAGAATATGCATAAAGAGGGCTTAGCCCAGTGCCTGGCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR GCA 90 bp TGGCTATTTATTTGCCTGTACAAAAGAGTGAACTCTTATCCCTGGCCAGGCCCAACATGGGAAGGTATCTaGCCTGTGGTTTTCATGAGC +
Preference number: 4 (lower is better)
Translates to: WLFICLYKRVNSYPWPGPTWEGI*PVVFMS
Trigger: GCTCATGAAAACCACAGGGCAGATACCTTCCCATGT...TGGGCCTGGCCAGGGATAAGAGTTCACTCTTTTGTACAGGCAAATAAATAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR GCA 90 bp CAAGAACTCACTATCATGAATACAACACCAACCCATGAGAGATCCACCCCCATATCCCCGGGTCCCAGCTaGCGGTTTATTTATAGAATG +
Preference number: 4 (lower is better)
Translates to: QELTIMNTTPTHERSTPISPGPS*RFIYRM
Trigger: CATTCTATAAATAAACCGGCAGCTGGGACCCGGGGA...TATGGGGGTGGATCTCTCATGGGTTGGTGTTGTATTCATGATAGTGAGTTCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CCA 90 bp TGGCTATTTATTTGCCTGTACAAAAGAGTGAACTCTTATCCCTGGCCAGGCCCACCCCACCTCCAGCACTaGAGATTGCAATTAAACATG +
Preference number: 4 (lower is better)
Translates to: WLFICLYKRVNSYPWPGPPHLQH*RLQLNM
Trigger: CATGTTTAATTGCAATCTCCAGTGCTGGAGGTGGGG...TGGGCCTGGCCAGGGATAAGAGTTCACTCTTTTGTACAGGCAAATAAATAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CCA 90 bp CAAGAACTCACTATCATGAATACAACACCAACCCATGAGAGATCCACCCCCATACGGGACAACTCAAATTaGAGACTTCCAGGCTATGGG +
Preference number: 4 (lower is better)
Translates to: QELTIMNTTPTHERSTPIRDNSN*RLPGYG
Trigger: CCCATAGCCTGGAAGTCTCCAATTTGAGTTGTCCCG...TATGGGGGTGGATCTCTCATGGGTTGGTGTTGTATTCATGATAGTGAGTTCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CCA 90 bp TATGCCAGGCACTGGGCTAAGCCCTCTTTATGCATATTCTCACTTAATTGTTGTCCATATGCCAGGCACTaGGCTAAGCCCTCTTTATGC +
Preference number: 4 (lower is better)
Translates to: YARHWAKPSLCIFSLNCCPYARH*AKPSLC
Trigger: GCATAAAGAGGGCTTAGCCCAGTGCCTGGCATATGG...ACAACAATTAAGTGAGAATATGCATAAAGAGGGCTTAGCCCAGTGCCTGGCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CCA 90 bp CAAGAACTCACTATCATGAATACAACACCAACCCATGAGAGATCCACCCCCATAGATGGAAGAACGTGCTaGCATACATGGCGTATCACC +
Preference number: 4 (lower is better)
Translates to: QELTIMNTTPTHERSTPIDGRTC*HTWRIT
Trigger: GGTGATACGCCATGTATGCCAGCACGTTCTTCCATC...TATGGGGGTGGATCTCTCATGGGTTGGTGTTGTATTCATGATAGTGAGTTCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR TCA 90 bp TATGCCAGGCACTGGGCTAAGCCCTCTTTATGCATATTCTCACTTAATTGTTGTTGTCCTACCTGTAGCTaGGCTGATCTTCACAACAGC +
Preference number: 4 (lower is better)
Translates to: YARHWAKPSLCIFSLNCCCPTCS*ADLHNS
Trigger: GCTGTTGTGAAGATCAGCTCAGCTACAGGTAGGACA...ACAACAATTAAGTGAGAATATGCATAAAGAGGGCTTAGCCCAGTGCCTGGCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR TCA 90 bp CAGATAGCTATTCTGAGCTTGGTTAACTTCAGTCCATCTGGAAAAGATTTTTGGATGAATGGTCCACCGTaGGAAATCCCGGGGTCCCTT +
Preference number: 4 (lower is better)
Translates to: QIAILSLVNFSPSGKDFWMNGPP*EIPGSL
Trigger: AAGGGACCCCGGGATTTCTCACGGTGGACCATTCAT...CCAAAAATCTTTTCCAGATGGACTGAAGTTAACCAAGCTCAGAATAGCTATCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR TCA 90 bp AAAGGGGGAGCAGGTACATCACATGACAAAAGCAGGAGCAAGAGAGAGAGGCAGCTTTTTGTAGTTGATTaGATTGGCCGAGAGGTTTTT +
Preference number: 4 (lower is better)
Translates to: KGGAGTSHDKSRSKRERQLFVVD*IGREVF
Trigger: AAAAACCTCTCGGCCAATTCAATCAACTACAAAAAG...CTGCCTCTCTCTCTTGCTCCTGCTTTTGTCATGTGATGTACCTGCTCCCCCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR TCA 90 bp CAAGAACTCACTATCATGAATACAACACCAACCCATGAGAGATCCACCCCCATATGCCTGGCTCTTAGTTaGTTATCTCCTAGATCAGGG +
Preference number: 4 (lower is better)
Translates to: QELTIMNTTPTHERSTPICLALS*LSPRSG
Trigger: CCCTGATCTAGGAGATAATCAACTAAGAGCCAGGCA...TATGGGGGTGGATCTCTCATGGGTTGGTGTTGTATTCATGATAGTGAGTTCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR TCA 90 bp CAAGAACTCACTATCATGAATACAACACCAACCCATGAGAGATCCACCCCCATAATTCTGAGCCAAATATaGGTAACCATGGCCCGCAAC +
Preference number: 4 (lower is better)
Translates to: QELTIMNTTPTHERSTPIILSQI*VTMARN
Trigger: GTTGCGGGCCATGGTTACTCATATTTGGCTCAGAAT...TATGGGGGTGGATCTCTCATGGGTTGGTGTTGTATTCATGATAGTGAGTTCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR TCA 90 bp AAAGGGGGAGCAGGTACATCACATGACAAAAGCAGGAGCAAGAGAGAGAGGCAGATCTTCTCAGTGCAATaGGAAATTTACCATTACTCG +
Preference number: 4 (lower is better)
Translates to: KGGAGTSHDKSRSKRERQIFSVQ*EIYHYS
Trigger: CGAGTAATGGTAAATTTCTCATTGCACTGAGAAGAT...CTGCCTCTCTCTCTTGCTCCTGCTTTTGTCATGTGATGTACCTGCTCCCCCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR TCA 90 bp AAAGGGGGAGCAGGTACATCACATGACAAAAGCAGGAGCAAGAGAGAGAGGCAGAAAGTAAGTGAATGTTaGTGGTGCATAGGACAACAA +
Preference number: 4 (lower is better)
Translates to: KGGAGTSHDKSRSKRERQKVSEC*WCIGQQ
Trigger: TTGTTGTCCTATGCACCATCAACATTCACTTACTTT...CTGCCTCTCTCTCTTGCTCCTGCTTTTGTCATGTGATGTACCTGCTCCCCCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR TCA 90 bp TATGCCAGGCACTGGGCTAAGCCCTCTTTATGCATATTCTCACTTAATTGTTGTGCCTGTACAAAAGAGTaGACTCTTATCCCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: YARHWAKPSLCIFSLNCCACTKE*TLIPGQ
Trigger: CTGGCCAGGGATAAGAGTTCACTCTTTTGTACAGGC...ACAACAATTAAGTGAGAATATGCATAAAGAGGGCTTAGCCCAGTGCCTGGCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR TCA 90 bp CAAGAACTCACTATCATGAATACAACACCAACCCATGAGAGATCCACCCCCATAAAAAGTTCCAAGCCATaGATGCAAGAGACCGGTGTG +
Preference number: 4 (lower is better)
Translates to: QELTIMNTTPTHERSTPIKSSKP*MQETGV
Trigger: CACACCGGTCTCTTGCATTCATGGCTTGGAACTTTT...TATGGGGGTGGATCTCTCATGGGTTGGTGTTGTATTCATGATAGTGAGTTCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR TCA 90 bp TATGCCAGGCACTGGGCTAAGCCCTCTTTATGCATATTCTCACTTAATTGTTGTGTTGTGATTTGCTGCTaGATGGATGAGGTAGGAGGG +
Preference number: 4 (lower is better)
Translates to: YARHWAKPSLCIFSLNCCVVICC*MDEVGG
Trigger: CCCTCCTACCTCATCCATTCAGCAGCAAATCACAAC...ACAACAATTAAGTGAGAATATGCATAAAGAGGGCTTAGCCCAGTGCCTGGCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS-3UTR TCA 90 bp CAGATAGCTATTCTGAGCTTGGTTAACTTCAGTCCATCTGGAAAAGATTTTTGGAGCTACTTGGAAGGCTaGGGTGAGGGGGATCACTTG +
Preference number: 4 (lower is better)
Translates to: QIAILSLVNFSPSGKDFWSYLEG*GEGDHL
Trigger: CAAGTGATCCCCCTCACCTCAGCCTTCCAAGTAGCT...CCAAAAATCTTTTCCAGATGGACTGAAGTTAACCAAGCTCAGAATAGCTATCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS-3UTR TCA 90 bp CAGATAGCTATTCTGAGCTTGGTTAACTTCAGTCCATCTGGAAAAGATTTTTGGAATCGCTTGAACCCATaGGGCGGAGGTTGCAGTGAG +
Preference number: 4 (lower is better)
Translates to: QIAILSLVNFSPSGKDFWNRLNP*GGGCSE
Trigger: CTCACTGCAACCTCCGCCTCATGGGTTCAAGCGATT...CCAAAAATCTTTTCCAGATGGACTGAAGTTAACCAAGCTCAGAATAGCTATCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS-3UTR GCA 90 bp TATGCCAGGCACTGGGCTAAGCCCTCTTTATGCATATTCTCACTTAATTGTTGTATCTGCATTTCCCACTaGTCCATGGCTGGTTTCTCG +
Preference number: 4 (lower is better)
Translates to: YARHWAKPSLCIFSLNCCICISH*SMAGFS
Trigger: CGAGAAACCAGCCATGGAGCAGTGGGAAATGCAGAT...ACAACAATTAAGTGAGAATATGCATAAAGAGGGCTTAGCCCAGTGCCTGGCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR GCA 90 bp AAAGGGGGAGCAGGTACATCACATGACAAAAGCAGGAGCAAGAGAGAGAGGCAGTGCCATAACATCTTTTaGAAACCAGATCATCTGCAT +
Preference number: 4 (lower is better)
Translates to: KGGAGTSHDKSRSKRERQCHNIF*KPDHLH
Trigger: ATGCAGATGATCTGGTTTGCAAAAGATGTTATGGCA...CTGCCTCTCTCTCTTGCTCCTGCTTTTGTCATGTGATGTACCTGCTCCCCCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR GCA 90 bp TATGCCAGGCACTGGGCTAAGCCCTCTTTATGCATATTCTCACTTAATTGTTGTTGGGCAGAAGGGTCCTaGAATCTTGTGCTACAAGAG +
Preference number: 4 (lower is better)
Translates to: YARHWAKPSLCIFSLNCCWAEGS*NLVLQE
Trigger: CTCTTGTAGCACAAGATTGCAGGACCCTTCTGCCCA...ACAACAATTAAGTGAGAATATGCATAAAGAGGGCTTAGCCCAGTGCCTGGCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR GCA 90 bp CAAGAACTCACTATCATGAATACAACACCAACCCATGAGAGATCCACCCCCATAGCGTATCACCTTACATaGAAGATAGTCAGGTTGCCC +
Preference number: 4 (lower is better)
Translates to: QELTIMNTTPTHERSTPIAYHLT*KIVRLP
Trigger: GGGCAACCTGACTATCTTGCATGTAAGGTGATACGC...TATGGGGGTGGATCTCTCATGGGTTGGTGTTGTATTCATGATAGTGAGTTCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR GCA 90 bp TATGCCAGGCACTGGGCTAAGCCCTCTTTATGCATATTCTCACTTAATTGTTGTTCCCCGGGTCCCAGCTaGCGGTTTATTTATAGAATG +
Preference number: 4 (lower is better)
Translates to: YARHWAKPSLCIFSLNCCSPGPS*RFIYRM
Trigger: CATTCTATAAATAAACCGGCAGCTGGGACCCGGGGA...ACAACAATTAAGTGAGAATATGCATAAAGAGGGCTTAGCCCAGTGCCTGGCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR GCA 90 bp TATGCCAGGCACTGGGCTAAGCCCTCTTTATGCATATTCTCACTTAATTGTTGTCTGGACTTACTGGATTaGATTGGGCAGAAGGGTCCT +
Preference number: 4 (lower is better)
Translates to: YARHWAKPSLCIFSLNCCLDLLD*IGQKGP
Trigger: AGGACCCTTCTGCCCAATGCAATCCAGTAAGTCCAG...ACAACAATTAAGTGAGAATATGCATAAAGAGGGCTTAGCCCAGTGCCTGGCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS-3UTR GCA 90 bp CAGATAGCTATTCTGAGCTTGGTTAACTTCAGTCCATCTGGAAAAGATTTTTGGCCAATGGGTTCACCTTaGCCACTGCCTAGACAGAGC +
Preference number: 4 (lower is better)
Translates to: QIAILSLVNFSPSGKDFWPMGSP*PLPRQS
Trigger: GCTCTGTCTAGGCAGTGGGCAAGGTGAACCCATTGG...CCAAAAATCTTTTCCAGATGGACTGAAGTTAACCAAGCTCAGAATAGCTATCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS-3UTR CCA 90 bp TGGCTATTTATTTGCCTGTACAAAAGAGTGAACTCTTATCCCTGGCCAGGCCCAAAGAGTGGGTATTTCTaGATTGCATTGGGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: WLFICLYKRVNSYPWPGPKSGYF*IALGRR
Trigger: CCTTCTGCCCAATGCAATCCAGAAATACCCACTCTT...TGGGCCTGGCCAGGGATAAGAGTTCACTCTTTTGTACAGGCAAATAAATAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302040.6
CDS-3UTR CCA 90 bp TATGCCAGGCACTGGGCTAAGCCCTCTTTATGCATATTCTCACTTAATTGTTGTCGGGGTCCCTTTCCATaGCTTTCCTCATGGCATTTT +
Preference number: 4 (lower is better)
Translates to: YARHWAKPSLCIFSLNCCRGPFP*LSSWHF
Trigger: AAAATGCCATGAGGAAAGCCATGGAAAGGGACCCCG...ACAACAATTAAGTGAGAATATGCATAAAGAGGGCTTAGCCCAGTGCCTGGCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CCA 90 bp CAAGAACTCACTATCATGAATACAACACCAACCCATGAGAGATCCACCCCCATACCCCACCTCCAGCACTaGAGATTGCAATTAAACATG +
Preference number: 4 (lower is better)
Translates to: QELTIMNTTPTHERSTPIPHLQH*RLQLNM
Trigger: CATGTTTAATTGCAATCTCCAGTGCTGGAGGTGGGG...TATGGGGGTGGATCTCTCATGGGTTGGTGTTGTATTCATGATAGTGAGTTCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CCA 90 bp CAAGAACTCACTATCATGAATACAACACCAACCCATGAGAGATCCACCCCCATAGGAAACTTACAATCATaGCAGAAGGCAAAGGGGGAG +
Preference number: 4 (lower is better)
Translates to: QELTIMNTTPTHERSTPIGNLQS*QKAKGE
Trigger: CTCCCCCTTTGCCTTCTGCCATGATTGTAAGTTTCC...TATGGGGGTGGATCTCTCATGGGTTGGTGTTGTATTCATGATAGTGAGTTCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CCA 90 bp TATGCCAGGCACTGGGCTAAGCCCTCTTTATGCATATTCTCACTTAATTGTTGTGCTTTACAGGAAGCATaGTGCTGGCATCAGCTTAGC +
Preference number: 4 (lower is better)
Translates to: YARHWAKPSLCIFSLNCCALQEA*CWHQLS
Trigger: GCTAAGCTGATGCCAGCACCATGCTTCCTGTAAAGC...ACAACAATTAAGTGAGAATATGCATAAAGAGGGCTTAGCCCAGTGCCTGGCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CCA 90 bp AAAGGGGGAGCAGGTACATCACATGACAAAAGCAGGAGCAAGAGAGAGAGGCAGCTGATATGTCTCAATTaGAGTGGATACCCTAAACTT +
Preference number: 4 (lower is better)
Translates to: KGGAGTSHDKSRSKRERQLICLN*SGYPKL
Trigger: AAGTTTAGGGTATCCACTCCAATTGAGACATATCAG...CTGCCTCTCTCTCTTGCTCCTGCTTTTGTCATGTGATGTACCTGCTCCCCCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CCA 90 bp CAAGAACTCACTATCATGAATACAACACCAACCCATGAGAGATCCACCCCCATAATGAGCTGGACTTACTaGATTGCATTGGGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: QELTIMNTTPTHERSTPIMSWTY*IALGRR
Trigger: CCTTCTGCCCAATGCAATCCAGTAAGTCCAGCTCAT...TATGGGGGTGGATCTCTCATGGGTTGGTGTTGTATTCATGATAGTGAGTTCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS-3UTR CCA 90 bp CAGATAGCTATTCTGAGCTTGGTTAACTTCAGTCCATCTGGAAAAGATTTTTGGTGGCGAGTAGGGGCTTaGGAAGTGGGGAATGCTGAT +
Preference number: 4 (lower is better)
Translates to: QIAILSLVNFSPSGKDFWWRVGA*EVGNAD
Trigger: ATCAGCATTCCCCACTTCCCAAGCCCCTACTCGCCA...CCAAAAATCTTTTCCAGATGGACTGAAGTTAACCAAGCTCAGAATAGCTATCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS-3UTR CCA 90 bp AAAGGGGGAGCAGGTACATCACATGACAAAAGCAGGAGCAAGAGAGAGAGGCAGAATTTGAGAACAGCCTaGAAAATATGGCAAAACCCT +
Preference number: 4 (lower is better)
Translates to: KGGAGTSHDKSRSKRERQNLRTA*KIWQNP
Trigger: AGGGTTTTGCCATATTTTCCAGGCTGTTCTCAAATT...CTGCCTCTCTCTCTTGCTCCTGCTTTTGTCATGTGATGTACCTGCTCCCCCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS-3UTR TCA 90 bp TATGCCAGGCACTGGGCTAAGCCCTCTTTATGCATATTCTCACTTAATTGTTGTAGGATAGGAGCTTGGTaGGTTAGAGTACAGGTCAAG +
Preference number: 4 (lower is better)
Translates to: YARHWAKPSLCIFSLNCCRIGAW*VRVQVK
Trigger: CTTGACCTGTACTCTAACTCACCAAGCTCCTATCCT...ACAACAATTAAGTGAGAATATGCATAAAGAGGGCTTAGCCCAGTGCCTGGCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR TCA 90 bp CAGATAGCTATTCTGAGCTTGGTTAACTTCAGTCCATCTGGAAAAGATTTTTGGAGTCACGGATCAAGCTaGTGGAAGAACGTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: QIAILSLVNFSPSGKDFWSHGSS*WKNVLA
Trigger: TGCCAGCACGTTCTTCCATCAGCTTGATCCGTGACT...CCAAAAATCTTTTCCAGATGGACTGAAGTTAACCAAGCTCAGAATAGCTATCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR TCA 90 bp TATGCCAGGCACTGGGCTAAGCCCTCTTTATGCATATTCTCACTTAATTGTTGTAAAAGTTCCAAGCCATaGATGCAAGAGACCGGTGTG +
Preference number: 4 (lower is better)
Translates to: YARHWAKPSLCIFSLNCCKSSKP*MQETGV
Trigger: CACACCGGTCTCTTGCATTCATGGCTTGGAACTTTT...ACAACAATTAAGTGAGAATATGCATAAAGAGGGCTTAGCCCAGTGCCTGGCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR TCA 90 bp CAGATAGCTATTCTGAGCTTGGTTAACTTCAGTCCATCTGGAAAAGATTTTTGGTTCTCTGTTTTTCTATaGGGTCTCCCCGGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: QIAILSLVNFSPSGKDFWFSVFL*GLPGSQ
Trigger: CTGGGACCCGGGGAGACCTCATAGAAAAACAGAGAA...CCAAAAATCTTTTCCAGATGGACTGAAGTTAACCAAGCTCAGAATAGCTATCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR TCA 90 bp CAGATAGCTATTCTGAGCTTGGTTAACTTCAGTCCATCTGGAAAAGATTTTTGGGGAAGTGGGGAATGCTaGTTGGTTAGGCTGGAGATG +
Preference number: 4 (lower is better)
Translates to: QIAILSLVNFSPSGKDFWGSGEC*LVRLEM
Trigger: CATCTCCAGCCTAACCAATCAGCATTCCCCACTTCC...CCAAAAATCTTTTCCAGATGGACTGAAGTTAACCAAGCTCAGAATAGCTATCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS-3UTR TCA 90 bp TATGCCAGGCACTGGGCTAAGCCCTCTTTATGCATATTCTCACTTAATTGTTGTGCCCATTCTGTTTCCTaGTCTATCCTTGTAACCACC +
Preference number: 4 (lower is better)
Translates to: YARHWAKPSLCIFSLNCCAHSVS*SILVTT
Trigger: GGTGGTTACAAGGATAGATCAGGAAACAGAATGGGC...ACAACAATTAAGTGAGAATATGCATAAAGAGGGCTTAGCCCAGTGCCTGGCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS-3UTR TCA 90 bp TATGCCAGGCACTGGGCTAAGCCCTCTTTATGCATATTCTCACTTAATTGTTGTGGCAGCCCAATTGCTTaGGCTCAAGAATTTGAGAAC +
Preference number: 4 (lower is better)
Translates to: YARHWAKPSLCIFSLNCCGSPIA*AQEFEN
Trigger: GTTCTCAAATTCTTGAGCTCAAGCAATTGGGCTGCC...ACAACAATTAAGTGAGAATATGCATAAAGAGGGCTTAGCCCAGTGCCTGGCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS-3UTR TCA 90 bp TGGCTATTTATTTGCCTGTACAAAAGAGTGAACTCTTATCCCTGGCCAGGCCCAGATGTAAGATCAAAATaGGGAAACAGGCCAGGAACA +
Preference number: 4 (lower is better)
Translates to: WLFICLYKRVNSYPWPGPDVRSK*GNRPGT
Trigger: TGTTCCTGGCCTGTTTCCTCATTTTGATCTTACATC...TGGGCCTGGCCAGGGATAAGAGTTCACTCTTTTGTACAGGCAAATAAATAGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS-3UTR TCA 90 bp TGGCTATTTATTTGCCTGTACAAAAGAGTGAACTCTTATCCCTGGCCAGGCCCAAAGACAGACTGGCACTaGTGTAAGATCAAAATGAGG +
Preference number: 4 (lower is better)
Translates to: WLFICLYKRVNSYPWPGPKTDWH*CKIKMR
Trigger: CCTCATTTTGATCTTACATCAGTGCCAGTCTGTCTT...TGGGCCTGGCCAGGGATAAGAGTTCACTCTTTTGTACAGGCAAATAAATAGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS-3UTR GCA 90 bp AAAGGGGGAGCAGGTACATCACATGACAAAAGCAGGAGCAAGAGAGAGAGGCAGAATTATGTAAATGTCTaGACAATTCACCTAGCTCAC +
Preference number: 4 (lower is better)
Translates to: KGGAGTSHDKSRSKRERQNYVNV*TIHLAH
Trigger: GTGAGCTAGGTGAATTGTGCAGACATTTACATAATT...CTGCCTCTCTCTCTTGCTCCTGCTTTTGTCATGTGATGTACCTGCTCCCCCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR GCA 90 bp AAAGGGGGAGCAGGTACATCACATGACAAAAGCAGGAGCAAGAGAGAGAGGCAGAAGGCCTACTGTTCTTaGACTGCTATAAAAATATTC +
Preference number: 4 (lower is better)
Translates to: KGGAGTSHDKSRSKRERQKAYCS*TAIKIF
Trigger: GAATATTTTTATAGCAGTGCAAGAACAGTAGGCCTT...CTGCCTCTCTCTCTTGCTCCTGCTTTTGTCATGTGATGTACCTGCTCCCCCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR GCA 90 bp AAAGGGGGAGCAGGTACATCACATGACAAAAGCAGGAGCAAGAGAGAGAGGCAGGAACTGCTTCTGATATaGAAGAGAAATCATAGAGAT +
Preference number: 4 (lower is better)
Translates to: KGGAGTSHDKSRSKRERQELLLI*KRNHRD
Trigger: ATCTCTATGATTTCTCTTGCATATCAGAAGCAGTTC...CTGCCTCTCTCTCTTGCTCCTGCTTTTGTCATGTGATGTACCTGCTCCCCCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR GCA 90 bp AAAGGGGGAGCAGGTACATCACATGACAAAAGCAGGAGCAAGAGAGAGAGGCAGGGTAGTTGGGCAAACTaGAAAAATACCTTATATCTT +
Preference number: 4 (lower is better)
Translates to: KGGAGTSHDKSRSKRERQGSWAN*KNTLYL
Trigger: AAGATATAAGGTATTTTTGCAGTTTGCCCAACTACC...CTGCCTCTCTCTCTTGCTCCTGCTTTTGTCATGTGATGTACCTGCTCCCCCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR GCA 90 bp CAAGAACTCACTATCATGAATACAACACCAACCCATGAGAGATCCACCCCCATATCTTCAACTAGATACTaGCAGCCATTTGGTCTGGCA +
Preference number: 4 (lower is better)
Translates to: QELTIMNTTPTHERSTPISSTRY*QPFGLA
Trigger: TGCCAGACCAAATGGCTGGCAGTATCTAGTTGAAGA...TATGGGGGTGGATCTCTCATGGGTTGGTGTTGTATTCATGATAGTGAGTTCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CCA 90 bp TGGCTATTTATTTGCCTGTACAAAAGAGTGAACTCTTATCCCTGGCCAGGCCCAAGTAAACCATGCTTCTaGAATCTCCGCTCCTTTGTT +
Preference number: 4 (lower is better)
Translates to: WLFICLYKRVNSYPWPGPSKPCF*NLRSFV
Trigger: AACAAAGGAGCGGAGATTCCAGAAGCATGGTTTACT...TGGGCCTGGCCAGGGATAAGAGTTCACTCTTTTGTACAGGCAAATAAATAGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CCA 90 bp TGGCTATTTATTTGCCTGTACAAAAGAGTGAACTCTTATCCCTGGCCAGGCCCAAGACAAAGTACTGAGTaGCACAGCCAACAAAGGAAA +
Preference number: 4 (lower is better)
Translates to: WLFICLYKRVNSYPWPGPRQSTE*HSQQRK
Trigger: TTTCCTTTGTTGGCTGTGCCACTCAGTACTTTGTCT...TGGGCCTGGCCAGGGATAAGAGTTCACTCTTTTGTACAGGCAAATAAATAGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CCA 90 bp CAAGAACTCACTATCATGAATACAACACCAACCCATGAGAGATCCACCCCCATACATGATTCTGAAACATaGGAAGGTATCTGCCCTGTG +
Preference number: 4 (lower is better)
Translates to: QELTIMNTTPTHERSTPIHDSET*EGICPV
Trigger: CACAGGGCAGATACCTTCCCATGTTTCAGAATCATG...TATGGGGGTGGATCTCTCATGGGTTGGTGTTGTATTCATGATAGTGAGTTCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CCA 90 bp AAAGGGGGAGCAGGTACATCACATGACAAAAGCAGGAGCAAGAGAGAGAGGCAGATAAAGAGATTTAATTaGCTCACAGTTCTTCAGGCT +
Preference number: 4 (lower is better)
Translates to: KGGAGTSHDKSRSKRERQIKRFN*LTVLQA
Trigger: AGCCTGAAGAACTGTGAGCCAATTAAATCTCTTTAT...CTGCCTCTCTCTCTTGCTCCTGCTTTTGTCATGTGATGTACCTGCTCCCCCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CCA 90 bp AAAGGGGGAGCAGGTACATCACATGACAAAAGCAGGAGCAAGAGAGAGAGGCAGATTCTCTATAGAATGTaGATTTTTCCCACAAGAGAC +
Preference number: 4 (lower is better)
Translates to: KGGAGTSHDKSRSKRERQILYRM*IFPTRD
Trigger: GTCTCTTGTGGGAAAAATCCACATTCTATAGAGAAT...CTGCCTCTCTCTCTTGCTCCTGCTTTTGTCATGTGATGTACCTGCTCCCCCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CCA 90 bp TATGCCAGGCACTGGGCTAAGCCCTCTTTATGCATATTCTCACTTAATTGTTGTTATGGGTGCACCTGTTaGCTGAGACTGATATGTCTC +
Preference number: 4 (lower is better)
Translates to: YARHWAKPSLCIFSLNCCYGCTC*LRLICL
Trigger: GAGACATATCAGTCTCAGCCAACAGGTGCACCCATA...ACAACAATTAAGTGAGAATATGCATAAAGAGGGCTTAGCCCAGTGCCTGGCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CCA 90 bp TGGCTATTTATTTGCCTGTACAAAAGAGTGAACTCTTATCCCTGGCCAGGCCCAATAGAGATAGTAATATaGGTGCACCTGTTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: WLFICLYKRVNSYPWPGPIEIVI*VHLLAE
Trigger: CTCAGCCAACAGGTGCACCCATATTACTATCTCTAT...TGGGCCTGGCCAGGGATAAGAGTTCACTCTTTTGTACAGGCAAATAAATAGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CCA 90 bp TATGCCAGGCACTGGGCTAAGCCCTCTTTATGCATATTCTCACTTAATTGTTGTACGTGCTGGCATACATaGCGTATCACCTTACATGCA +
Preference number: 4 (lower is better)
Translates to: YARHWAKPSLCIFSLNCCTCWHT*RITLHA
Trigger: TGCATGTAAGGTGATACGCCATGTATGCCAGCACGT...ACAACAATTAAGTGAGAATATGCATAAAGAGGGCTTAGCCCAGTGCCTGGCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CCA 90 bp CAGATAGCTATTCTGAGCTTGGTTAACTTCAGTCCATCTGGAAAAGATTTTTGGGTGAACTCTTATCCCTaGCCAGGCCCACAAGCAGTA +
Preference number: 4 (lower is better)
Translates to: QIAILSLVNFSPSGKDFWVNSYP*PGPQAV
Trigger: TACTGCTTGTGGGCCTGGCCAGGGATAAGAGTTCAC...CCAAAAATCTTTTCCAGATGGACTGAAGTTAACCAAGCTCAGAATAGCTATCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CCA 90 bp CAAGAACTCACTATCATGAATACAACACCAACCCATGAGAGATCCACCCCCATAATACTGCCAGCCATTTaGTCTGGCAATTCTGAAGAG +
Preference number: 4 (lower is better)
Translates to: QELTIMNTTPTHERSTPIILPAI*SGNSEE
Trigger: CTCTTCAGAATTGCCAGACCAAATGGCTGGCAGTAT...TATGGGGGTGGATCTCTCATGGGTTGGTGTTGTATTCATGATAGTGAGTTCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CCA 90 bp CAAGAACTCACTATCATGAATACAACACCAACCCATGAGAGATCCACCCCCATAGCTGATTGGTTAGGCTaGAGATGGAATCAAATGGGT +
Preference number: 4 (lower is better)
Translates to: QELTIMNTTPTHERSTPIADWLG*RWNQMG
Trigger: ACCCATTTGATTCCATCTCCAGCCTAACCAATCAGC...TATGGGGGTGGATCTCTCATGGGTTGGTGTTGTATTCATGATAGTGAGTTCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS-3UTR TCA 90 bp TATGCCAGGCACTGGGCTAAGCCCTCTTTATGCATATTCTCACTTAATTGTTGTCATTTGAGGATGGTCTaGAAGTCCCAGGAGAATGAA +
Preference number: 4 (lower is better)
Translates to: YARHWAKPSLCIFSLNCCHLRMV*KSQENE
Trigger: TTCATTCTCCTGGGACTTTCAGACCATCCTCAAATG...ACAACAATTAAGTGAGAATATGCATAAAGAGGGCTTAGCCCAGTGCCTGGCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR TCA 90 bp CAGATAGCTATTCTGAGCTTGGTTAACTTCAGTCCATCTGGAAAAGATTTTTGGATGGGCATGTGCAGGTaGGAGTCCATCTTAATGAGG +
Preference number: 4 (lower is better)
Translates to: QIAILSLVNFSPSGKDFWMGMCR*ESILMR
Trigger: CCTCATTAAGATGGACTCTCACCTGCACATGCCCAT...CCAAAAATCTTTTCCAGATGGACTGAAGTTAACCAAGCTCAGAATAGCTATCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR TCA 90 bp TTCGATGACTTTCCTCCTATACATACAAACTCTGTTTTAACATTCCAGGATGTTTCACCACCTCGCTGGTaGAGGTATCAGAGCAGGACA +
Preference number: 4 (lower is better)
Translates to: FDDFPPIHTNSVLTFQDVSPPRW*RYQSRT
Trigger: TGTCCTGCTCTGATACCTTCACCAGCGAGGTGGTGA...AACATCCTGGAATGTTAAAACAGAGTTTGTATGTATAGGAGGAAAGTCATCGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR TCA 90 bp TATGCCAGGCACTGGGCTAAGCCCTCTTTATGCATATTCTCACTTAATTGTTGTTGTAACCATAAGAGATaGGGACCACTAGCACAGACA +
Preference number: 4 (lower is better)
Translates to: YARHWAKPSLCIFSLNCCCNHKR*GPLAQT
Trigger: TGTCTGTGCTAGTGGTCCTCATCTCTTATGGTTACA...ACAACAATTAAGTGAGAATATGCATAAAGAGGGCTTAGCCCAGTGCCTGGCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR TCA 90 bp CAGATAGCTATTCTGAGCTTGGTTAACTTCAGTCCATCTGGAAAAGATTTTTGGTGTCCTACCTGTAGCTaGGCTGATCTTCACAACAGC +
Preference number: 4 (lower is better)
Translates to: QIAILSLVNFSPSGKDFWCPTCS*ADLHNS
Trigger: GCTGTTGTGAAGATCAGCTCAGCTACAGGTAGGACA...CCAAAAATCTTTTCCAGATGGACTGAAGTTAACCAAGCTCAGAATAGCTATCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR TCA 90 bp TATGCCAGGCACTGGGCTAAGCCCTCTTTATGCATATTCTCACTTAATTGTTGTTGGGTCGCATGTACATaGAGAATCCAGAACCATAGA +
Preference number: 4 (lower is better)
Translates to: YARHWAKPSLCIFSLNCCWVACT*RIQNHR
Trigger: TCTATGGTTCTGGATTCTTCATGTACATGCGACCCA...ACAACAATTAAGTGAGAATATGCATAAAGAGGGCTTAGCCCAGTGCCTGGCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR TCA 90 bp CAGATAGCTATTCTGAGCTTGGTTAACTTCAGTCCATCTGGAAAAGATTTTTGGTGGGAGTCAGAAGCCTaGGTTTTGTCTTCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: QIAILSLVNFSPSGKDFWWESEA*VLSSAP
Trigger: TGGAGCTGAAGACAAAACTCAGGCTTCTGACTCCCA...CCAAAAATCTTTTCCAGATGGACTGAAGTTAACCAAGCTCAGAATAGCTATCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641361.1
ENST00000641673.1
CDS-3UTR TCA 90 bp CAAGAACTCACTATCATGAATACAACACCAACCCATGAGAGATCCACCCCCATATCAAATGGGTCGAAGTaGGTTTTTCTTGCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: QELTIMNTTPTHERSTPISNGSK*VFLAVF
Trigger: GAAGACAGCAAGAAAAACTCACTTCGACCCATTTGA...TATGGGGGTGGATCTCTCATGGGTTGGTGTTGTATTCATGATAGTGAGTTCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS-3UTR GCA 90 bp TGGCTATTTATTTGCCTGTACAAAAGAGTGAACTCTTATCCCTGGCCAGGCCCATCCCACAAGAGACTTTaGAAGGCAATTTCAAGGTAT +
Preference number: 4 (lower is better)
Translates to: WLFICLYKRVNSYPWPGPSHKRL*KAISRY
Trigger: ATACCTTGAAATTGCCTTGCAAAGTCTCTTGTGGGA...TGGGCCTGGCCAGGGATAAGAGTTCACTCTTTTGTACAGGCAAATAAATAGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR GCA 90 bp TATGCCAGGCACTGGGCTAAGCCCTCTTTATGCATATTCTCACTTAATTGTTGTCCACTTTATCAGCTTTaGTGTGATCCCTTTCTCTCC +
Preference number: 4 (lower is better)
Translates to: YARHWAKPSLCIFSLNCCPLYQL*CDPFLS
Trigger: GGAGAGAAAGGGATCACAGCAAAGCTGATAAAGTGG...ACAACAATTAAGTGAGAATATGCATAAAGAGGGCTTAGCCCAGTGCCTGGCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR GCA 90 bp CAGATAGCTATTCTGAGCTTGGTTAACTTCAGTCCATCTGGAAAAGATTTTTGGGCTGATGGAAGAACGTaGTGGCATACATGGCGTATC +
Preference number: 4 (lower is better)
Translates to: QIAILSLVNFSPSGKDFWADGRT*WHTWRI
Trigger: GATACGCCATGTATGCCAGCACGTTCTTCCATCAGC...CCAAAAATCTTTTCCAGATGGACTGAAGTTAACCAAGCTCAGAATAGCTATCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR GCA 90 bp CAGATAGCTATTCTGAGCTTGGTTAACTTCAGTCCATCTGGAAAAGATTTTTGGGTTCCAAGCCATGAATaGAAGAGACCGGTGTGGCTA +
Preference number: 4 (lower is better)
Translates to: QIAILSLVNFSPSGKDFWVPSHE*KRPVWL
Trigger: TAGCCACACCGGTCTCTTGCATTCATGGCTTGGAAC...CCAAAAATCTTTTCCAGATGGACTGAAGTTAACCAAGCTCAGAATAGCTATCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR GCA 90 bp CAAGAACTCACTATCATGAATACAACACCAACCCATGAGAGATCCACCCCCATATTTAGACTTTTGGATTaGATTGGGCAGAAGGGTCCT +
Preference number: 4 (lower is better)
Translates to: QELTIMNTTPTHERSTPIFRLLD*IGQKGP
Trigger: AGGACCCTTCTGCCCAATGCAATCCAAAAGTCTAAA...TATGGGGGTGGATCTCTCATGGGTTGGTGTTGTATTCATGATAGTGAGTTCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641361.1
CDS-3UTR GCA 90 bp CAAGAACTCACTATCATGAATACAACACCAACCCATGAGAGATCCACCCCCATAGAATTTGTTTGCCCATaGATGTTTGCACCCAATGGT +
Preference number: 4 (lower is better)
Translates to: QELTIMNTTPTHERSTPIEFVCP*MFAPNG
Trigger: ACCATTGGGTGCAAACATGCATGGGCAAACAAATTC...TATGGGGGTGGATCTCTCATGGGTTGGTGTTGTATTCATGATAGTGAGTTCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS-3UTR CCA 90 bp CAAGAACTCACTATCATGAATACAACACCAACCCATGAGAGATCCACCCCCATAAGACAAAGTACTGAGTaGCACAGCCAACAAAGGAAA +
Preference number: 4 (lower is better)
Translates to: QELTIMNTTPTHERSTPIRQSTE*HSQQRK
Trigger: TTTCCTTTGTTGGCTGTGCCACTCAGTACTTTGTCT...TATGGGGGTGGATCTCTCATGGGTTGGTGTTGTATTCATGATAGTGAGTTCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CCA 90 bp TATGCCAGGCACTGGGCTAAGCCCTCTTTATGCATATTCTCACTTAATTGTTGTCATAAAATCAGCCCGTaGTTTCACTACGCACTCTCT +
Preference number: 4 (lower is better)
Translates to: YARHWAKPSLCIFSLNCCHKISP*FHYALS
Trigger: AGAGAGTGCGTAGTGAAACCACGGGCTGATTTTATG...ACAACAATTAAGTGAGAATATGCATAAAGAGGGCTTAGCCCAGTGCCTGGCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CCA 90 bp TATGCCAGGCACTGGGCTAAGCCCTCTTTATGCATATTCTCACTTAATTGTTGTTGCAAGAGACCGGTGTaGCTATTTATTTGCCTGTAC +
Preference number: 4 (lower is better)
Translates to: YARHWAKPSLCIFSLNCCCKRPV*LFICLY
Trigger: GTACAGGCAAATAAATAGCCACACCGGTCTCTTGCA...ACAACAATTAAGTGAGAATATGCATAAAGAGGGCTTAGCCCAGTGCCTGGCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CCA 90 bp TGGCTATTTATTTGCCTGTACAAAAGAGTGAACTCTTATCCCTGGCCAGGCCCATTTATTTATAGAATGTaGTCCCACCCAAAGTGTGCG +
Preference number: 4 (lower is better)
Translates to: WLFICLYKRVNSYPWPGPFIYRM*SHPKCA
Trigger: CGCACACTTTGGGTGGGACCACATTCTATAAATAAA...TGGGCCTGGCCAGGGATAAGAGTTCACTCTTTTGTACAGGCAAATAAATAGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CCA 90 bp TGGCTATTTATTTGCCTGTACAAAAGAGTGAACTCTTATCCCTGGCCAGGCCCATCTCATTTTCCCAAATaGGAAAGGAGAGGGTTGAAT +
Preference number: 4 (lower is better)
Translates to: WLFICLYKRVNSYPWPGPSHFPK*ERRGLN
Trigger: ATTCAACCCTCTCCTTTCCCATTTGGGAAAATGAGA...TGGGCCTGGCCAGGGATAAGAGTTCACTCTTTTGTACAGGCAAATAAATAGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CCA 90 bp TTCGATGACTTTCCTCCTATACATACAAACTCTGTTTTAACATTCCAGGATGTTGCTGTCTTCTGTTCCTaGGTGGGATGGCAGAACTGG +
Preference number: 4 (lower is better)
Translates to: FDDFPPIHTNSVLTFQDVAVFCS*VGWQNW
Trigger: CCAGTTCTGCCATCCCACCCAGGAACAGAAGACAGC...AACATCCTGGAATGTTAAAACAGAGTTTGTATGTATAGGAGGAAAGTCATCGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS-3UTR CCA 90 bp TTCGATGACTTTCCTCCTATACATACAAACTCTGTTTTAACATTCCAGGATGTTCAGCACTTTGGGAGGTaGAGGCAGCCCAATTGCTTG +
Preference number: 4 (lower is better)
Translates to: FDDFPPIHTNSVLTFQDVQHFGR*RQPNCL
Trigger: CAAGCAATTGGGCTGCCTCCACCTCCCAAAGTGCTG...AACATCCTGGAATGTTAAAACAGAGTTTGTATGTATAGGAGGAAAGTCATCGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS-3UTR CCA 90 bp TATGCCAGGCACTGGGCTAAGCCCTCTTTATGCATATTCTCACTTAATTGTTGTTGGGCTGAGCCATTGTaGTCAAGAACAAACAGCAAT +
Preference number: 4 (lower is better)
Translates to: YARHWAKPSLCIFSLNCCWAEPL*SRTNSN
Trigger: ATTGCTGTTTGTTCTTGACCACAATGGCTCAGCCCA...ACAACAATTAAGTGAGAATATGCATAAAGAGGGCTTAGCCCAGTGCCTGGCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS-3UTR CCA 90 bp CAAGAACTCACTATCATGAATACAACACCAACCCATGAGAGATCCACCCCCATACATATTCCATTTTGGTaGAGGAAATCCAGGCAATGG +
Preference number: 4 (lower is better)
Translates to: QELTIMNTTPTHERSTPIHIPFW*RKSRQW
Trigger: CCATTGCCTGGATTTCCTCCACCAAAATGGAATATG...TATGGGGGTGGATCTCTCATGGGTTGGTGTTGTATTCATGATAGTGAGTTCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641673.1
3UTR CAA 72 bp CAGGTTAAGGTAAAGGATTGTGGAGACCAAGTTTTATaGTGCAGAAGAAGCTCTCAGACAGCAGACTTCAGA +
Preference number: 4 (lower is better)
Translates to: QVKVKDCGDQVL*CRRSSQTADFR
Trigger: TCTGAAGTCTGCTGTCTGAGAGCTTCTTCTGCACAATAAAACTTGGTCTCCACAATCCTTTACCTTAACCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR TCA 90 bp TATGCCAGGCACTGGGCTAAGCCCTCTTTATGCATATTCTCACTTAATTGTTGTAGGAAAATCTTCATTTaGGGATGGTCTGAAAGTCCC +
Preference number: 4 (lower is better)
Translates to: YARHWAKPSLCIFSLNCCRKIFI*GWSESP
Trigger: GGGACTTTCAGACCATCCTCAAATGAAGATTTTCCT...ACAACAATTAAGTGAGAATATGCATAAAGAGGGCTTAGCCCAGTGCCTGGCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR TCA 90 bp CAGATAGCTATTCTGAGCTTGGTTAACTTCAGTCCATCTGGAAAAGATTTTTGGCAGAAGACAAAGTACTaGGTGGCACAGCCAACAAAG +
Preference number: 4 (lower is better)
Translates to: QIAILSLVNFSPSGKDFWQKTKY*VAQPTK
Trigger: CTTTGTTGGCTGTGCCACTCAGTACTTTGTCTTCTG...CCAAAAATCTTTTCCAGATGGACTGAAGTTAACCAAGCTCAGAATAGCTATCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR TCA 90 bp CAGATAGCTATTCTGAGCTTGGTTAACTTCAGTCCATCTGGAAAAGATTTTTGGATTCTGAGCCAAATATaGGTAACCATGGCCCGCAAC +
Preference number: 4 (lower is better)
Translates to: QIAILSLVNFSPSGKDFWILSQI*VTMARN
Trigger: GTTGCGGGCCATGGTTACTCATATTTGGCTCAGAAT...CCAAAAATCTTTTCCAGATGGACTGAAGTTAACCAAGCTCAGAATAGCTATCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR TCA 90 bp CAGATAGCTATTCTGAGCTTGGTTAACTTCAGTCCATCTGGAAAAGATTTTTGGAGGATAGGAGCTTGGTaGGTTAGAGTACAGGTCAAG +
Preference number: 4 (lower is better)
Translates to: QIAILSLVNFSPSGKDFWRIGAW*VRVQVK
Trigger: CTTGACCTGTACTCTAACTCACCAAGCTCCTATCCT...CCAAAAATCTTTTCCAGATGGACTGAAGTTAACCAAGCTCAGAATAGCTATCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR TCA 90 bp CAGATAGCTATTCTGAGCTTGGTTAACTTCAGTCCATCTGGAAAAGATTTTTGGCCTCATTTCTGTGGATaGTCACAGAGTAGGCAAGCT +
Preference number: 4 (lower is better)
Translates to: QIAILSLVNFSPSGKDFWPHFCG*SQSRQA
Trigger: AGCTTGCCTACTCTGTGATCATCCACAGAAATGAGG...CCAAAAATCTTTTCCAGATGGACTGAAGTTAACCAAGCTCAGAATAGCTATCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR TCA 90 bp TTCGATGACTTTCCTCCTATACATACAAACTCTGTTTTAACATTCCAGGATGTTAGTCACGGATCAAGCTaGTGGAAGAACGTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: FDDFPPIHTNSVLTFQDVSHGSS*WKNVLA
Trigger: TGCCAGCACGTTCTTCCATCAGCTTGATCCGTGACT...AACATCCTGGAATGTTAAAACAGAGTTTGTATGTATAGGAGGAAAGTCATCGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR TCA 90 bp CAAGAACTCACTATCATGAATACAACACCAACCCATGAGAGATCCACCCCCATACCATTCATAACTTGCTaGGGACTTTGGAAAAGTCAT +
Preference number: 4 (lower is better)
Translates to: QELTIMNTTPTHERSTPIPFITC*GLWKSH
Trigger: ATGACTTTTCCAAAGTCCTCAGCAAGTTATGAATGG...TATGGGGGTGGATCTCTCATGGGTTGGTGTTGTATTCATGATAGTGAGTTCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641361.1
ENST00000641673.1
CDS-3UTR TCA 90 bp TGGCTATTTATTTGCCTGTACAAAAGAGTGAACTCTTATCCCTGGCCAGGCCCAAAGACGAGCCTAGATTaGTCTTCACTAAAACATCAA +
Preference number: 4 (lower is better)
Translates to: WLFICLYKRVNSYPWPGPKTSLD*SSLKHQ
Trigger: TTGATGTTTTAGTGAAGATCAATCTAGGCTCGTCTT...TGGGCCTGGCCAGGGATAAGAGTTCACTCTTTTGTACAGGCAAATAAATAGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS-3UTR TCA 90 bp TTCGATGACTTTCCTCCTATACATACAAACTCTGTTTTAACATTCCAGGATGTTCTGACTGAGATGGGCTaGGCCATTGTGGTCAAGAAC +
Preference number: 4 (lower is better)
Translates to: FDDFPPIHTNSVLTFQDVLTEMG*AIVVKN
Trigger: GTTCTTGACCACAATGGCTCAGCCCATCTCAGTCAG...AACATCCTGGAATGTTAAAACAGAGTTTGTATGTATAGGAGGAAAGTCATCGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS-3UTR GCA 90 bp CAGATAGCTATTCTGAGCTTGGTTAACTTCAGTCCATCTGGAAAAGATTTTTGGGCAAACCAGATCATCTaGATTTCCCACTGCTCCATG +
Preference number: 4 (lower is better)
Translates to: QIAILSLVNFSPSGKDFWANQII*ISHCSM
Trigger: CATGGAGCAGTGGGAAATGCAGATGATCTGGTTTGC...CCAAAAATCTTTTCCAGATGGACTGAAGTTAACCAAGCTCAGAATAGCTATCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR GCA 90 bp CAGATAGCTATTCTGAGCTTGGTTAACTTCAGTCCATCTGGAAAAGATTTTTGGTGTAAAGCAAGGGGTTaGAGATTGCAGCATACCGGT +
Preference number: 4 (lower is better)
Translates to: QIAILSLVNFSPSGKDFWCKARG*RLQHTG
Trigger: ACCGGTATGCTGCAATCTGCAACCCCTTGCTTTACA...CCAAAAATCTTTTCCAGATGGACTGAAGTTAACCAAGCTCAGAATAGCTATCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR GCA 90 bp CAAGAACTCACTATCATGAATACAACACCAACCCATGAGAGATCCACCCCCATAATTCTTAACCCTCTTTaGAAAAGTCCCTCCATATCC +
Preference number: 4 (lower is better)
Translates to: QELTIMNTTPTHERSTPIILNPL*KSPSIS
Trigger: GGATATGGAGGGACTTTTGCAAAGAGGGTTAAGAAT...TATGGGGGTGGATCTCTCATGGGTTGGTGTTGTATTCATGATAGTGAGTTCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR GCA 90 bp CAAGAACTCACTATCATGAATACAACACCAACCCATGAGAGATCCACCCCCATAGACCAAGTTTTATTGTaGAGAAGAAGCTCTCAGACA +
Preference number: 4 (lower is better)
Translates to: QELTIMNTTPTHERSTPIDQVLL*RRSSQT
Trigger: TGTCTGAGAGCTTCTTCTGCACAATAAAACTTGGTC...TATGGGGGTGGATCTCTCATGGGTTGGTGTTGTATTCATGATAGTGAGTTCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR GCA 90 bp CAAGAACTCACTATCATGAATACAACACCAACCCATGAGAGATCCACCCCCATAAAGATTTTTGGAAGTTaGAAACATGAGTGCCACACC +
Preference number: 4 (lower is better)
Translates to: QELTIMNTTPTHERSTPIKIFGS*KHECHT
Trigger: GGTGTGGCACTCATGTTTGCAACTTCCAAAAATCTT...TATGGGGGTGGATCTCTCATGGGTTGGTGTTGTATTCATGATAGTGAGTTCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR GCA 90 bp TGGCTATTTATTTGCCTGTACAAAAGAGTGAACTCTTATCCCTGGCCAGGCCCACACACACACTTAGCATaGTTAAGACCAGAACATTTA +
Preference number: 4 (lower is better)
Translates to: WLFICLYKRVNSYPWPGPHTHLA*LRPEHL
Trigger: TAAATGTTCTGGTCTTAAGCATGCTAAGTGTGTGTG...TGGGCCTGGCCAGGGATAAGAGTTCACTCTTTTGTACAGGCAAATAAATAGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS-3UTR CCA 90 bp CAGATAGCTATTCTGAGCTTGGTTAACTTCAGTCCATCTGGAAAAGATTTTTGGCCACTGCTCCATGGCTaGTTTCTCGTTCCATCAATT +
Preference number: 4 (lower is better)
Translates to: QIAILSLVNFSPSGKDFWPLLHG*FLVPSI
Trigger: AATTGATGGAACGAGAAACCAGCCATGGAGCAGTGG...CCAAAAATCTTTTCCAGATGGACTGAAGTTAACCAAGCTCAGAATAGCTATCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CCA 90 bp TATGCCAGGCACTGGGCTAAGCCCTCTTTATGCATATTCTCACTTAATTGTTGTGGTCATAAAAATGAATaGTCCACCGTGAGAAATCCC +
Preference number: 4 (lower is better)
Translates to: YARHWAKPSLCIFSLNCCGHKNE*STVRNP
Trigger: GGGATTTCTCACGGTGGACCATTCATTTTTATGACC...ACAACAATTAAGTGAGAATATGCATAAAGAGGGCTTAGCCCAGTGCCTGGCATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CCA 90 bp CAGATAGCTATTCTGAGCTTGGTTAACTTCAGTCCATCTGGAAAAGATTTTTGGGGAAACTTACAATCATaGCAGAAGGCAAAGGGGGAG +
Preference number: 4 (lower is better)
Translates to: QIAILSLVNFSPSGKDFWGNLQS*QKAKGE
Trigger: CTCCCCCTTTGCCTTCTGCCATGATTGTAAGTTTCC...CCAAAAATCTTTTCCAGATGGACTGAAGTTAACCAAGCTCAGAATAGCTATCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CCA 90 bp TTCGATGACTTTCCTCCTATACATACAAACTCTGTTTTAACATTCCAGGATGTTCCATATGCCAGGCACTaGGCTAAGCCCTCTTTATGC +
Preference number: 4 (lower is better)
Translates to: FDDFPPIHTNSVLTFQDVPYARH*AKPSLC
Trigger: GCATAAAGAGGGCTTAGCCCAGTGCCTGGCATATGG...AACATCCTGGAATGTTAAAACAGAGTTTGTATGTATAGGAGGAAAGTCATCGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CCA 90 bp TGGCTATTTATTTGCCTGTACAAAAGAGTGAACTCTTATCCCTGGCCAGGCCCACTGATATGTCTCAATTaGAGTGGATACCCTAAACTT +
Preference number: 4 (lower is better)
Translates to: WLFICLYKRVNSYPWPGPLICLN*SGYPKL
Trigger: AAGTTTAGGGTATCCACTCCAATTGAGACATATCAG...TGGGCCTGGCCAGGGATAAGAGTTCACTCTTTTGTACAGGCAAATAAATAGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CCA 90 bp CAGATAGCTATTCTGAGCTTGGTTAACTTCAGTCCATCTGGAAAAGATTTTTGGTATGGGTGCACCTGTTaGCTGAGACTGATATGTCTC +
Preference number: 4 (lower is better)
Translates to: QIAILSLVNFSPSGKDFWYGCTC*LRLICL
Trigger: GAGACATATCAGTCTCAGCCAACAGGTGCACCCATA...CCAAAAATCTTTTCCAGATGGACTGAAGTTAACCAAGCTCAGAATAGCTATCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CCA 90 bp CAGATAGCTATTCTGAGCTTGGTTAACTTCAGTCCATCTGGAAAAGATTTTTGGACGTGCTGGCATACATaGCGTATCACCTTACATGCA +
Preference number: 4 (lower is better)
Translates to: QIAILSLVNFSPSGKDFWTCWHT*RITLHA
Trigger: TGCATGTAAGGTGATACGCCATGTATGCCAGCACGT...CCAAAAATCTTTTCCAGATGGACTGAAGTTAACCAAGCTCAGAATAGCTATCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CCA 90 bp CAGATAGCTATTCTGAGCTTGGTTAACTTCAGTCCATCTGGAAAAGATTTTTGGGTGGGGAATGCTGATTaGTTAGGCTGGAGATGGAAT +
Preference number: 4 (lower is better)
Translates to: QIAILSLVNFSPSGKDFWVGNAD*LGWRWN
Trigger: ATTCCATCTCCAGCCTAACCAATCAGCATTCCCCAC...CCAAAAATCTTTTCCAGATGGACTGAAGTTAACCAAGCTCAGAATAGCTATCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS-3UTR CCA 90 bp CAAGAACTCACTATCATGAATACAACACCAACCCATGAGAGATCCACCCCCATAAGAATGACAAAAATTTaGACTAGCACGGTCAGCACA +
Preference number: 4 (lower is better)
Translates to: QELTIMNTTPTHERSTPIRMTKI*TSTVST
Trigger: TGTGCTGACCGTGCTAGTCCAAATTTTTGTCATTCT...TATGGGGGTGGATCTCTCATGGGTTGGTGTTGTATTCATGATAGTGAGTTCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS-3UTR TCA 90 bp TATGCCAGGCACTGGGCTAAGCCCTCTTTATGCATATTCTCACTTAATTGTTGTTTATCAGCTTTGCTGTaGTCCCTTTCTCTCCAAATA +
Preference number: 4 (lower is better)
Translates to: YARHWAKPSLCIFSLNCCLSALL*SLSLQI
Trigger: TATTTGGAGAGAAAGGGATCACAGCAAAGCTGATAA...ACAACAATTAAGTGAGAATATGCATAAAGAGGGCTTAGCCCAGTGCCTGGCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR TCA 90 bp CAGATAGCTATTCTGAGCTTGGTTAACTTCAGTCCATCTGGAAAAGATTTTTGGGGGTGTATCAGGAACTaGTCCACTTTATCAGCTTTG +
Preference number: 4 (lower is better)
Translates to: QIAILSLVNFSPSGKDFWGCIRN*STLSAL
Trigger: CAAAGCTGATAAAGTGGATCAGTTCCTGATACACCC...CCAAAAATCTTTTCCAGATGGACTGAAGTTAACCAAGCTCAGAATAGCTATCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR TCA 90 bp TATGCCAGGCACTGGGCTAAGCCCTCTTTATGCATATTCTCACTTAATTGTTGTCAAGCTCTAGGTTTGTaGAGGTTTAAGACTAGAAAC +
Preference number: 4 (lower is better)
Translates to: YARHWAKPSLCIFSLNCCQALGL*RFKTRN
Trigger: GTTTCTAGTCTTAAACCTTCACAAACCTAGAGCTTG...ACAACAATTAAGTGAGAATATGCATAAAGAGGGCTTAGCCCAGTGCCTGGCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR TCA 90 bp CAGATAGCTATTCTGAGCTTGGTTAACTTCAGTCCATCTGGAAAAGATTTTTGGCATCCCCAGGGGGTTTaGAAATGTTATAGACATGAG +
Preference number: 4 (lower is better)
Translates to: QIAILSLVNFSPSGKDFWHPQGV*KCYRHE
Trigger: CTCATGTCTATAACATTTTCAAACCCCCTGGGGATG...CCAAAAATCTTTTCCAGATGGACTGAAGTTAACCAAGCTCAGAATAGCTATCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR TCA 90 bp TATGCCAGGCACTGGGCTAAGCCCTCTTTATGCATATTCTCACTTAATTGTTGTATGCTCTATGCTTGTTaGCCAAAAGAGAATCCATCT +
Preference number: 4 (lower is better)
Translates to: YARHWAKPSLCIFSLNCCMLYAC*PKENPS
Trigger: AGATGGATTCTCTTTTGGTCAACAAGCATAGAGCAT...ACAACAATTAAGTGAGAATATGCATAAAGAGGGCTTAGCCCAGTGCCTGGCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641361.1
ENST00000641673.1
CDS-3UTR GCA 90 bp CAAGAACTCACTATCATGAATACAACACCAACCCATGAGAGATCCACCCCCATAGGTCCTGCAATCTTGTaGTACAAGAGAAGAAATATT +
Preference number: 4 (lower is better)
Translates to: QELTIMNTTPTHERSTPIGPAIL*YKRRNI
Trigger: AATATTTCTTCTCTTGTAGCACAAGATTGCAGGACC...TATGGGGGTGGATCTCTCATGGGTTGGTGTTGTATTCATGATAGTGAGTTCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR GCA 90 bp CAGATAGCTATTCTGAGCTTGGTTAACTTCAGTCCATCTGGAAAAGATTTTTGGAGTTGCAAACATGAGTaGCACACCCTAGATGATGGT +
Preference number: 4 (lower is better)
Translates to: QIAILSLVNFSPSGKDFWSCKHE*HTLDDG
Trigger: ACCATCATCTAGGGTGTGGCACTCATGTTTGCAACT...CCAAAAATCTTTTCCAGATGGACTGAAGTTAACCAAGCTCAGAATAGCTATCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR GCA 90 bp TTCGATGACTTTCCTCCTATACATACAAACTCTGTTTTAACATTCCAGGATGTTGCTGATGGAAGAACGTaGTGGCATACATGGCGTATC +
Preference number: 4 (lower is better)
Translates to: FDDFPPIHTNSVLTFQDVADGRT*WHTWRI
Trigger: GATACGCCATGTATGCCAGCACGTTCTTCCATCAGC...AACATCCTGGAATGTTAAAACAGAGTTTGTATGTATAGGAGGAAAGTCATCGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR GCA 90 bp CAAGAACTCACTATCATGAATACAACACCAACCCATGAGAGATCCACCCCCATAGTGTGGCTATTTATTTaGCTGTACAAAAGAGTGAAC +
Preference number: 4 (lower is better)
Translates to: QELTIMNTTPTHERSTPIVWLFI*LYKRVN
Trigger: GTTCACTCTTTTGTACAGGCAAATAAATAGCCACAC...TATGGGGGTGGATCTCTCATGGGTTGGTGTTGTATTCATGATAGTGAGTTCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CCA 90 bp TTCGATGACTTTCCTCCTATACATACAAACTCTGTTTTAACATTCCAGGATGTTCGGGGTCCCTTTCCATaGCTTTCCTCATGGCATTTT +
Preference number: 4 (lower is better)
Translates to: FDDFPPIHTNSVLTFQDVRGPFP*LSSWHF
Trigger: AAAATGCCATGAGGAAAGCCATGGAAAGGGACCCCG...AACATCCTGGAATGTTAAAACAGAGTTTGTATGTATAGGAGGAAAGTCATCGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CCA 90 bp TTCGATGACTTTCCTCCTATACATACAAACTCTGTTTTAACATTCCAGGATGTTCGGGACAACTCAAATTaGAGACTTCCAGGCTATGGG +
Preference number: 4 (lower is better)
Translates to: FDDFPPIHTNSVLTFQDVRDNSN*RLPGYG
Trigger: CCCATAGCCTGGAAGTCTCCAATTTGAGTTGTCCCG...AACATCCTGGAATGTTAAAACAGAGTTTGTATGTATAGGAGGAAAGTCATCGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CCA 90 bp CAGATAGCTATTCTGAGCTTGGTTAACTTCAGTCCATCTGGAAAAGATTTTTGGCATAAAATCAGCCCGTaGTTTCACTACGCACTCTCT +
Preference number: 4 (lower is better)
Translates to: QIAILSLVNFSPSGKDFWHKISP*FHYALS
Trigger: AGAGAGTGCGTAGTGAAACCACGGGCTGATTTTATG...CCAAAAATCTTTTCCAGATGGACTGAAGTTAACCAAGCTCAGAATAGCTATCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CCA 90 bp TATGCCAGGCACTGGGCTAAGCCCTCTTTATGCATATTCTCACTTAATTGTTGTTTTATTTATAGAATGTaGTCCCACCCAAAGTGTGCG +
Preference number: 4 (lower is better)
Translates to: YARHWAKPSLCIFSLNCCFIYRM*SHPKCA
Trigger: CGCACACTTTGGGTGGGACCACATTCTATAAATAAA...ACAACAATTAAGTGAGAATATGCATAAAGAGGGCTTAGCCCAGTGCCTGGCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CCA 90 bp CAGATAGCTATTCTGAGCTTGGTTAACTTCAGTCCATCTGGAAAAGATTTTTGGACTTTTGGATTGCATTaGGCAGAAGGGTCCTGCAAT +
Preference number: 4 (lower is better)
Translates to: QIAILSLVNFSPSGKDFWTFGLH*AEGSCN
Trigger: ATTGCAGGACCCTTCTGCCCAATGCAATCCAAAAGT...CCAAAAATCTTTTCCAGATGGACTGAAGTTAACCAAGCTCAGAATAGCTATCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000641361.1
CDS-3UTR CCA 90 bp CAGATAGCTATTCTGAGCTTGGTTAACTTCAGTCCATCTGGAAAAGATTTTTGGTTTGAAGTGTCCCTTTaGATTTGGGTTCCCTATGGC +
Preference number: 4 (lower is better)
Translates to: QIAILSLVNFSPSGKDFWFEVSL*IWVPYG
Trigger: GCCATAGGGAACCCAAATCCAAAGGGACACTTCAAA...CCAAAAATCTTTTCCAGATGGACTGAAGTTAACCAAGCTCAGAATAGCTATCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CCA 90 bp CAGATAGCTATTCTGAGCTTGGTTAACTTCAGTCCATCTGGAAAAGATTTTTGGTGGTTAGGCTGGAGATaGAATCAAATGGGTCGAAGT +
Preference number: 4 (lower is better)
Translates to: QIAILSLVNFSPSGKDFWWLGWR*NQMGRS
Trigger: ACTTCGACCCATTTGATTCCATCTCCAGCCTAACCA...CCAAAAATCTTTTCCAGATGGACTGAAGTTAACCAAGCTCAGAATAGCTATCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS-3UTR TCA 90 bp TTCGATGACTTTCCTCCTATACATACAAACTCTGTTTTAACATTCCAGGATGTTATTCTGAGCCAAATATaGGTAACCATGGCCCGCAAC +
Preference number: 4 (lower is better)
Translates to: FDDFPPIHTNSVLTFQDVILSQI*VTMARN
Trigger: GTTGCGGGCCATGGTTACTCATATTTGGCTCAGAAT...AACATCCTGGAATGTTAAAACAGAGTTTGTATGTATAGGAGGAAAGTCATCGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR TCA 90 bp TATGCCAGGCACTGGGCTAAGCCCTCTTTATGCATATTCTCACTTAATTGTTGTAAAGTAAGTGAATGTTaGTGGTGCATAGGACAACAA +
Preference number: 4 (lower is better)
Translates to: YARHWAKPSLCIFSLNCCKVSEC*WCIGQQ
Trigger: TTGTTGTCCTATGCACCATCAACATTCACTTACTTT...ACAACAATTAAGTGAGAATATGCATAAAGAGGGCTTAGCCCAGTGCCTGGCATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR TCA 90 bp CAGATAGCTATTCTGAGCTTGGTTAACTTCAGTCCATCTGGAAAAGATTTTTGGTTGGTCTGGCAATTCTaGAGAGAGATGCTGCTATAT +
Preference number: 4 (lower is better)
Translates to: QIAILSLVNFSPSGKDFWLVWQF*REMLLY
Trigger: ATATAGCAGCATCTCTCTTCAGAATTGCCAGACCAA...CCAAAAATCTTTTCCAGATGGACTGAAGTTAACCAAGCTCAGAATAGCTATCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR TCA 90 bp CAGATAGCTATTCTGAGCTTGGTTAACTTCAGTCCATCTGGAAAAGATTTTTGGGAAGGGTTTGGCCTATaGCTTACTATATTTGGTGTG +
Preference number: 4 (lower is better)
Translates to: QIAILSLVNFSPSGKDFWEGFGL*LTIFGV
Trigger: CACACCAAATATAGTAAGTCATAGGCCAAACCCTTC...CCAAAAATCTTTTCCAGATGGACTGAAGTTAACCAAGCTCAGAATAGCTATCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS-3UTR TCA 90 bp TTCGATGACTTTCCTCCTATACATACAAACTCTGTTTTAACATTCCAGGATGTTAGCAAGGGACAACTTTaGTGTCATCAGGCCAGAACA +
Preference number: 4 (lower is better)
Translates to: FDDFPPIHTNSVLTFQDVSKGQL*CHQART
Trigger: TGTTCTGGCCTGATGACATCAAAGTTGTCCCTTGCT...AACATCCTGGAATGTTAAAACAGAGTTTGTATGTATAGGAGGAAAGTCATCGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS-3UTR GCA 90 bp TATGCCAGGCACTGGGCTAAGCCCTCTTTATGCATATTCTCACTTAATTGTTGTTGCCATAACATCTTTTaGAAACCAGATCATCTGCAT +
Preference number: 4 (lower is better)
Translates to: YARHWAKPSLCIFSLNCCCHNIF*KPDHLH
Trigger: ATGCAGATGATCTGGTTTGCAAAAGATGTTATGGCA...ACAACAATTAAGTGAGAATATGCATAAAGAGGGCTTAGCCCAGTGCCTGGCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR GCA 90 bp TATGCCAGGCACTGGGCTAAGCCCTCTTTATGCATATTCTCACTTAATTGTTGTGGTCCTGCAATCTTGTaGTACAAGAGAAGAAATATT +
Preference number: 4 (lower is better)
Translates to: YARHWAKPSLCIFSLNCCGPAIL*YKRRNI
Trigger: AATATTTCTTCTCTTGTAGCACAAGATTGCAGGACC...ACAACAATTAAGTGAGAATATGCATAAAGAGGGCTTAGCCCAGTGCCTGGCATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR GCA 90 bp TTCGATGACTTTCCTCCTATACATACAAACTCTGTTTTAACATTCCAGGATGTTTGTAAAGCAAGGGGTTaGAGATTGCAGCATACCGGT +
Preference number: 4 (lower is better)
Translates to: FDDFPPIHTNSVLTFQDVCKARG*RLQHTG
Trigger: ACCGGTATGCTGCAATCTGCAACCCCTTGCTTTACA...AACATCCTGGAATGTTAAAACAGAGTTTGTATGTATAGGAGGAAAGTCATCGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR GCA 90 bp TTCGATGACTTTCCTCCTATACATACAAACTCTGTTTTAACATTCCAGGATGTTACATGGGAAGGTATCTaGCCTGTGGTTTTCATGAGC +
Preference number: 4 (lower is better)
Translates to: FDDFPPIHTNSVLTFQDVTWEGI*PVVFMS
Trigger: GCTCATGAAAACCACAGGGCAGATACCTTCCCATGT...AACATCCTGGAATGTTAAAACAGAGTTTGTATGTATAGGAGGAAAGTCATCGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR GCA 90 bp TTCGATGACTTTCCTCCTATACATACAAACTCTGTTTTAACATTCCAGGATGTTGCGTATCACCTTACATaGAAGATAGTCAGGTTGCCC +
Preference number: 4 (lower is better)
Translates to: FDDFPPIHTNSVLTFQDVAYHLT*KIVRLP
Trigger: GGGCAACCTGACTATCTTGCATGTAAGGTGATACGC...AACATCCTGGAATGTTAAAACAGAGTTTGTATGTATAGGAGGAAAGTCATCGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR GCA 90 bp CAAGAACTCACTATCATGAATACAACACCAACCCATGAGAGATCCACCCCCATAAATCCATATGCTCTATaGTTGTTGACCAAAAGAGAA +
Preference number: 4 (lower is better)
Translates to: QELTIMNTTPTHERSTPINPYAL*LLTKRE
Trigger: TTCTCTTTTGGTCAACAAGCATAGAGCATATGGATT...TATGGGGGTGGATCTCTCATGGGTTGGTGTTGTATTCATGATAGTGAGTTCTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641361.1
ENST00000641673.1
CDS-3UTR GCA 90 bp TATGCCAGGCACTGGGCTAAGCCCTCTTTATGCATATTCTCACTTAATTGTTGTTCAAGACAGGGGAATTaGAATGGAGAAAGAGTAATT +
Preference number: 4 (lower is better)
Translates to: YARHWAKPSLCIFSLNCCSRQGN*NGERVI
Trigger: AATTACTCTTTCTCCATTGCAATTCCCCTGTCTTGA...ACAACAATTAAGTGAGAATATGCATAAAGAGGGCTTAGCCCAGTGCCTGGCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS-3UTR GCA 90 bp TTCGATGACTTTCCTCCTATACATACAAACTCTGTTTTAACATTCCAGGATGTTACAGGCAGGGAGTTTTaGCCATTCTGTTTCCTGATC +
Preference number: 4 (lower is better)
Translates to: FDDFPPIHTNSVLTFQDVTGREF*PFCFLI
Trigger: GATCAGGAAACAGAATGGGCAAAACTCCCTGCCTGT...AACATCCTGGAATGTTAAAACAGAGTTTGTATGTATAGGAGGAAAGTCATCGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS-3UTR CCA 90 bp CAGATAGCTATTCTGAGCTTGGTTAACTTCAGTCCATCTGGAAAAGATTTTTGGAGTAAACCATGCTTCTaGAATCTCCGCTCCTTTGTT +
Preference number: 4 (lower is better)
Translates to: QIAILSLVNFSPSGKDFWSKPCF*NLRSFV
Trigger: AACAAAGGAGCGGAGATTCCAGAAGCATGGTTTACT...CCAAAAATCTTTTCCAGATGGACTGAAGTTAACCAAGCTCAGAATAGCTATCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CCA 90 bp CAGATAGCTATTCTGAGCTTGGTTAACTTCAGTCCATCTGGAAAAGATTTTTGGGGTCATAAAAATGAATaGTCCACCGTGAGAAATCCC +
Preference number: 4 (lower is better)
Translates to: QIAILSLVNFSPSGKDFWGHKNE*STVRNP
Trigger: GGGATTTCTCACGGTGGACCATTCATTTTTATGACC...CCAAAAATCTTTTCCAGATGGACTGAAGTTAACCAAGCTCAGAATAGCTATCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CCA 90 bp CAAGAACTCACTATCATGAATACAACACCAACCCATGAGAGATCCACCCCCATAATAAAGAGATTTAATTaGCTCACAGTTCTTCAGGCT +
Preference number: 4 (lower is better)
Translates to: QELTIMNTTPTHERSTPIIKRFN*LTVLQA
Trigger: AGCCTGAAGAACTGTGAGCCAATTAAATCTCTTTAT...TATGGGGGTGGATCTCTCATGGGTTGGTGTTGTATTCATGATAGTGAGTTCTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CCA 90 bp CAAGAACTCACTATCATGAATACAACACCAACCCATGAGAGATCCACCCCCATAGAGACTTCCAGGCTATaGGTAAATTTAAACATTTTC +
Preference number: 4 (lower is better)
Translates to: QELTIMNTTPTHERSTPIETSRL*VNLNIF
Trigger: GAAAATGTTTAAATTTACCCATAGCCTGGAAGTCTC...TATGGGGGTGGATCTCTCATGGGTTGGTGTTGTATTCATGATAGTGAGTTCTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR TCA 90 bp TTCGATGACTTTCCTCCTATACATACAAACTCTGTTTTAACATTCCAGGATGTTTGTAACCATAAGAGATaGGGACCACTAGCACAGACA +
Preference number: 4 (lower is better)
Translates to: FDDFPPIHTNSVLTFQDVCNHKR*GPLAQT
Trigger: TGTCTGTGCTAGTGGTCCTCATCTCTTATGGTTACA...AACATCCTGGAATGTTAAAACAGAGTTTGTATGTATAGGAGGAAAGTCATCGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR TCA 90 bp TTCGATGACTTTCCTCCTATACATACAAACTCTGTTTTAACATTCCAGGATGTTTGGGTCGCATGTACATaGAGAATCCAGAACCATAGA +
Preference number: 4 (lower is better)
Translates to: FDDFPPIHTNSVLTFQDVWVACT*RIQNHR
Trigger: TCTATGGTTCTGGATTCTTCATGTACATGCGACCCA...AACATCCTGGAATGTTAAAACAGAGTTTGTATGTATAGGAGGAAAGTCATCGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR TCA 90 bp CAGATAGCTATTCTGAGCTTGGTTAACTTCAGTCCATCTGGAAAAGATTTTTGGTCTAAGGAAACCATTTaGGAATCTCAGAAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: QIAILSLVNFSPSGKDFWSKETI*ESQKRE
Trigger: TTCCCTCTTCTGAGATTCTCAAATGGTTTCCTTAGA...CCAAAAATCTTTTCCAGATGGACTGAAGTTAACCAAGCTCAGAATAGCTATCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR TCA 90 bp CAGATAGCTATTCTGAGCTTGGTTAACTTCAGTCCATCTGGAAAAGATTTTTGGAAGAACTCACTATCATaGATACAACACCAACCCATG +
Preference number: 4 (lower is better)
Translates to: QIAILSLVNFSPSGKDFWKNSLS*IQHQPM
Trigger: CATGGGTTGGTGTTGTATTCATGATAGTGAGTTCTT...CCAAAAATCTTTTCCAGATGGACTGAAGTTAACCAAGCTCAGAATAGCTATCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR TCA 90 bp CAGATAGCTATTCTGAGCTTGGTTAACTTCAGTCCATCTGGAAAAGATTTTTGGCAAGCTCTAGGTTTGTaGAGGTTTAAGACTAGAAAC +
Preference number: 4 (lower is better)
Translates to: QIAILSLVNFSPSGKDFWQALGL*RFKTRN
Trigger: GTTTCTAGTCTTAAACCTTCACAAACCTAGAGCTTG...CCAAAAATCTTTTCCAGATGGACTGAAGTTAACCAAGCTCAGAATAGCTATCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR TCA 90 bp CAGATAGCTATTCTGAGCTTGGTTAACTTCAGTCCATCTGGAAAAGATTTTTGGAGAAGAACGTGGCTTTaGACACAAGATGAATTCTCT +
Preference number: 4 (lower is better)
Translates to: QIAILSLVNFSPSGKDFWRRTWL*TQDEFS
Trigger: AGAGAATTCATCTTGTGTTCAAAGCCACGTTCTTCT...CCAAAAATCTTTTCCAGATGGACTGAAGTTAACCAAGCTCAGAATAGCTATCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR TCA 90 bp CAGATAGCTATTCTGAGCTTGGTTAACTTCAGTCCATCTGGAAAAGATTTTTGGATGCTCTATGCTTGTTaGCCAAAAGAGAATCCATCT +
Preference number: 4 (lower is better)
Translates to: QIAILSLVNFSPSGKDFWMLYAC*PKENPS
Trigger: AGATGGATTCTCTTTTGGTCAACAAGCATAGAGCAT...CCAAAAATCTTTTCCAGATGGACTGAAGTTAACCAAGCTCAGAATAGCTATCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641361.1
ENST00000641673.1
CDS-3UTR GCA 90 bp CAGATAGCTATTCTGAGCTTGGTTAACTTCAGTCCATCTGGAAAAGATTTTTGGATTCTTAACCCTCTTTaGAAAAGTCCCTCCATATCC +
Preference number: 4 (lower is better)
Translates to: QIAILSLVNFSPSGKDFWILNPL*KSPSIS
Trigger: GGATATGGAGGGACTTTTGCAAAGAGGGTTAAGAAT...CCAAAAATCTTTTCCAGATGGACTGAAGTTAACCAAGCTCAGAATAGCTATCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR GCA 90 bp CAGATAGCTATTCTGAGCTTGGTTAACTTCAGTCCATCTGGAAAAGATTTTTGGGACCAAGTTTTATTGTaGAGAAGAAGCTCTCAGACA +
Preference number: 4 (lower is better)
Translates to: QIAILSLVNFSPSGKDFWDQVLL*RRSSQT
Trigger: TGTCTGAGAGCTTCTTCTGCACAATAAAACTTGGTC...CCAAAAATCTTTTCCAGATGGACTGAAGTTAACCAAGCTCAGAATAGCTATCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR GCA 90 bp TATGCCAGGCACTGGGCTAAGCCCTCTTTATGCATATTCTCACTTAATTGTTGTGGTAGTTGGGCAAACTaGAAAAATACCTTATATCTT +
Preference number: 4 (lower is better)
Translates to: YARHWAKPSLCIFSLNCCGSWAN*KNTLYL
Trigger: AAGATATAAGGTATTTTTGCAGTTTGCCCAACTACC...ACAACAATTAAGTGAGAATATGCATAAAGAGGGCTTAGCCCAGTGCCTGGCATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR GCA 90 bp TTCGATGACTTTCCTCCTATACATACAAACTCTGTTTTAACATTCCAGGATGTTCCACTTTATCAGCTTTaGTGTGATCCCTTTCTCTCC +
Preference number: 4 (lower is better)
Translates to: FDDFPPIHTNSVLTFQDVPLYQL*CDPFLS
Trigger: GGAGAGAAAGGGATCACAGCAAAGCTGATAAAGTGG...AACATCCTGGAATGTTAAAACAGAGTTTGTATGTATAGGAGGAAAGTCATCGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR GCA 90 bp TATGCCAGGCACTGGGCTAAGCCCTCTTTATGCATATTCTCACTTAATTGTTGTAATCCATATGCTCTATaGTTGTTGACCAAAAGAGAA +
Preference number: 4 (lower is better)
Translates to: YARHWAKPSLCIFSLNCCNPYAL*LLTKRE
Trigger: TTCTCTTTTGGTCAACAAGCATAGAGCATATGGATT...ACAACAATTAAGTGAGAATATGCATAAAGAGGGCTTAGCCCAGTGCCTGGCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641361.1
ENST00000641673.1
CDS-3UTR GCA 90 bp CAGATAGCTATTCTGAGCTTGGTTAACTTCAGTCCATCTGGAAAAGATTTTTGGAGTTACTTCAGCTTATaGCCAAGAATGGACAAAGAC +
Preference number: 4 (lower is better)
Translates to: QIAILSLVNFSPSGKDFWSYFSL*PRMDKD
Trigger: GTCTTTGTCCATTCTTGGGCATAAGCTGAAGTAACT...CCAAAAATCTTTTCCAGATGGACTGAAGTTAACCAAGCTCAGAATAGCTATCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS-3UTR CCA 90 bp TATGCCAGGCACTGGGCTAAGCCCTCTTTATGCATATTCTCACTTAATTGTTGTAACATGAGATGTGAATaGGGACAAATATCCAAATTC +
Preference number: 4 (lower is better)
Translates to: YARHWAKPSLCIFSLNCCNMRCE*GQISKF
Trigger: GAATTTGGATATTTGTCCCCATTCACATCTCATGTT...ACAACAATTAAGTGAGAATATGCATAAAGAGGGCTTAGCCCAGTGCCTGGCATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CCA 90 bp TATGCCAGGCACTGGGCTAAGCCCTCTTTATGCATATTCTCACTTAATTGTTGTATAATTTCCATTTTATaGTTAGGATCTGAGGCACCT +
Preference number: 4 (lower is better)
Translates to: YARHWAKPSLCIFSLNCCIISIL*LGSEAP
Trigger: AGGTGCCTCAGATCCTAACCATAAAATGGAAATTAT...ACAACAATTAAGTGAGAATATGCATAAAGAGGGCTTAGCCCAGTGCCTGGCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CCA 90 bp CAGATAGCTATTCTGAGCTTGGTTAACTTCAGTCCATCTGGAAAAGATTTTTGGTCTAATGAGAATTTATaGTTTGCAGGGCATGACTCC +
Preference number: 4 (lower is better)
Translates to: QIAILSLVNFSPSGKDFWSNENL*FAGHDS
Trigger: GGAGTCATGCCCTGCAAACCATAAATTCTCATTAGA...CCAAAAATCTTTTCCAGATGGACTGAAGTTAACCAAGCTCAGAATAGCTATCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CCA 90 bp TATGCCAGGCACTGGGCTAAGCCCTCTTTATGCATATTCTCACTTAATTGTTGTATTTGTCTTTCTATATaGCTTCCTGACAGATGGATA +
Preference number: 4 (lower is better)
Translates to: YARHWAKPSLCIFSLNCCICLSI*LPDRWI
Trigger: TATCCATCTGTCAGGAAGCCATATAGAAAGACAAAT...ACAACAATTAAGTGAGAATATGCATAAAGAGGGCTTAGCCCAGTGCCTGGCATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CCA 90 bp TTCGATGACTTTCCTCCTATACATACAAACTCTGTTTTAACATTCCAGGATGTTCATAAAATCAGCCCGTaGTTTCACTACGCACTCTCT +
Preference number: 4 (lower is better)
Translates to: FDDFPPIHTNSVLTFQDVHKISP*FHYALS
Trigger: AGAGAGTGCGTAGTGAAACCACGGGCTGATTTTATG...AACATCCTGGAATGTTAAAACAGAGTTTGTATGTATAGGAGGAAAGTCATCGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CCA 90 bp CAGATAGCTATTCTGAGCTTGGTTAACTTCAGTCCATCTGGAAAAGATTTTTGGTTTATTTATAGAATGTaGTCCCACCCAAAGTGTGCG +
Preference number: 4 (lower is better)
Translates to: QIAILSLVNFSPSGKDFWFIYRM*SHPKCA
Trigger: CGCACACTTTGGGTGGGACCACATTCTATAAATAAA...CCAAAAATCTTTTCCAGATGGACTGAAGTTAACCAAGCTCAGAATAGCTATCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CCA 90 bp TTCGATGACTTTCCTCCTATACATACAAACTCTGTTTTAACATTCCAGGATGTTTTTGAAGTGTCCCTTTaGATTTGGGTTCCCTATGGC +
Preference number: 4 (lower is better)
Translates to: FDDFPPIHTNSVLTFQDVFEVSL*IWVPYG
Trigger: GCCATAGGGAACCCAAATCCAAAGGGACACTTCAAA...AACATCCTGGAATGTTAAAACAGAGTTTGTATGTATAGGAGGAAAGTCATCGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CCA 90 bp TATGCCAGGCACTGGGCTAAGCCCTCTTTATGCATATTCTCACTTAATTGTTGTAGATTAGAAGCAAGATaGAGTCAGGTAGATATGATT +
Preference number: 4 (lower is better)
Translates to: YARHWAKPSLCIFSLNCCRLEAR*SQVDMI
Trigger: AATCATATCTACCTGACTCCATCTTGCTTCTAATCT...ACAACAATTAAGTGAGAATATGCATAAAGAGGGCTTAGCCCAGTGCCTGGCATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS-3UTR CCA 90 bp CAGATAGCTATTCTGAGCTTGGTTAACTTCAGTCCATCTGGAAAAGATTTTTGGAAGCCCATACATATCTaGCAGTTAAGAAAGACAGAC +
Preference number: 4 (lower is better)
Translates to: QIAILSLVNFSPSGKDFWKPIHI*QLRKTD
Trigger: GTCTGTCTTTCTTAACTGCCAGATATGTATGGGCTT...CCAAAAATCTTTTCCAGATGGACTGAAGTTAACCAAGCTCAGAATAGCTATCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS-3UTR GCA 90 bp CAGATAGCTATTCTGAGCTTGGTTAACTTCAGTCCATCTGGAAAAGATTTTTGGAGAATAGGCTGTAAATaGATAGTTGTGATTTGCTGC +
Preference number: 4 (lower is better)
Translates to: QIAILSLVNFSPSGKDFWRIGCK*IVVICC
Trigger: GCAGCAAATCACAACTATGCATTTACAGCCTATTCT...CCAAAAATCTTTTCCAGATGGACTGAAGTTAACCAAGCTCAGAATAGCTATCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS-3UTR CCA 90 bp TTCGATGACTTTCCTCCTATACATACAAACTCTGTTTTAACATTCCAGGATGTTGGTCATAAAAATGAATaGTCCACCGTGAGAAATCCC +
Preference number: 4 (lower is better)
Translates to: FDDFPPIHTNSVLTFQDVGHKNE*STVRNP
Trigger: GGGATTTCTCACGGTGGACCATTCATTTTTATGACC...AACATCCTGGAATGTTAAAACAGAGTTTGTATGTATAGGAGGAAAGTCATCGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
3UTR CAA 72 bp ATGGGTAAATTTAAACATTTTCTGGCAGACAATTGGTaGAGTTCGTCTGAAGACCTGGGATTAATGGAAAGA +
Preference number: 4 (lower is better)
Translates to: MGKFKHFLADNW*SSSEDLGLMER
Trigger: TCTTTCCATTAATCCCAGGTCTTCAGACGAACTCAACCAATTGTCTGCCAGAAAATGTTTAAATTTACCCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR TCA 90 bp TTCGATGACTTTCCTCCTATACATACAAACTCTGTTTTAACATTCCAGGATGTTTCTAAGGAAACCATTTaGGAATCTCAGAAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: FDDFPPIHTNSVLTFQDVSKETI*ESQKRE
Trigger: TTCCCTCTTCTGAGATTCTCAAATGGTTTCCTTAGA...AACATCCTGGAATGTTAAAACAGAGTTTGTATGTATAGGAGGAAAGTCATCGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR TCA 90 bp TTCGATGACTTTCCTCCTATACATACAAACTCTGTTTTAACATTCCAGGATGTTAAGAACTCACTATCATaGATACAACACCAACCCATG +
Preference number: 4 (lower is better)
Translates to: FDDFPPIHTNSVLTFQDVKNSLS*IQHQPM
Trigger: CATGGGTTGGTGTTGTATTCATGATAGTGAGTTCTT...AACATCCTGGAATGTTAAAACAGAGTTTGTATGTATAGGAGGAAAGTCATCGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR TCA 90 bp TTCGATGACTTTCCTCCTATACATACAAACTCTGTTTTAACATTCCAGGATGTTCCATTCATAACTTGCTaGGGACTTTGGAAAAGTCAT +
Preference number: 4 (lower is better)
Translates to: FDDFPPIHTNSVLTFQDVPFITC*GLWKSH
Trigger: ATGACTTTTCCAAAGTCCTCAGCAAGTTATGAATGG...AACATCCTGGAATGTTAAAACAGAGTTTGTATGTATAGGAGGAAAGTCATCGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641361.1
ENST00000641673.1
CDS-3UTR GCA 90 bp TTCGATGACTTTCCTCCTATACATACAAACTCTGTTTTAACATTCCAGGATGTTGACCAAGTTTTATTGTaGAGAAGAAGCTCTCAGACA +
Preference number: 4 (lower is better)
Translates to: FDDFPPIHTNSVLTFQDVDQVLL*RRSSQT
Trigger: TGTCTGAGAGCTTCTTCTGCACAATAAAACTTGGTC...AACATCCTGGAATGTTAAAACAGAGTTTGTATGTATAGGAGGAAAGTCATCGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CCA 90 bp TTCGATGACTTTCCTCCTATACATACAAACTCTGTTTTAACATTCCAGGATGTTTCTAATGAGAATTTATaGTTTGCAGGGCATGACTCC +
Preference number: 4 (lower is better)
Translates to: FDDFPPIHTNSVLTFQDVSNENL*FAGHDS
Trigger: GGAGTCATGCCCTGCAAACCATAAATTCTCATTAGA...AACATCCTGGAATGTTAAAACAGAGTTTGTATGTATAGGAGGAAAGTCATCGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CCA 90 bp TTCGATGACTTTCCTCCTATACATACAAACTCTGTTTTAACATTCCAGGATGTTTCTCATTTTCCCAAATaGGAAAGGAGAGGGTTGAAT +
Preference number: 4 (lower is better)
Translates to: FDDFPPIHTNSVLTFQDVSHFPK*ERRGLN
Trigger: ATTCAACCCTCTCCTTTCCCATTTGGGAAAATGAGA...AACATCCTGGAATGTTAAAACAGAGTTTGTATGTATAGGAGGAAAGTCATCGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CCA 90 bp CAGATAGCTATTCTGAGCTTGGTTAACTTCAGTCCATCTGGAAAAGATTTTTGGTTTACCAGAAGGGTTTaGCCTATGACTTACTATATT +
Preference number: 4 (lower is better)
Translates to: QIAILSLVNFSPSGKDFWFTRRV*PMTYYI
Trigger: AATATAGTAAGTCATAGGCCAAACCCTTCTGGTAAA...CCAAAAATCTTTTCCAGATGGACTGAAGTTAACCAAGCTCAGAATAGCTATCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS-3UTR TCA 90 bp TTCGATGACTTTCCTCCTATACATACAAACTCTGTTTTAACATTCCAGGATGTTCTTTTTGTAGTTGATTaGATTGGCCGAGAGGTTTTT +
Preference number: 4 (lower is better)
Translates to: FDDFPPIHTNSVLTFQDVLFVVD*IGREVF
Trigger: AAAAACCTCTCGGCCAATTCAATCAACTACAAAAAG...AACATCCTGGAATGTTAAAACAGAGTTTGTATGTATAGGAGGAAAGTCATCGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR TCA 90 bp TTCGATGACTTTCCTCCTATACATACAAACTCTGTTTTAACATTCCAGGATGTTATCTTCTCAGTGCAATaGGAAATTTACCATTACTCG +
Preference number: 4 (lower is better)
Translates to: FDDFPPIHTNSVLTFQDVIFSVQ*EIYHYS
Trigger: CGAGTAATGGTAAATTTCTCATTGCACTGAGAAGAT...AACATCCTGGAATGTTAAAACAGAGTTTGTATGTATAGGAGGAAAGTCATCGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR TCA 90 bp TTCGATGACTTTCCTCCTATACATACAAACTCTGTTTTAACATTCCAGGATGTTAAAGTAAGTGAATGTTaGTGGTGCATAGGACAACAA +
Preference number: 4 (lower is better)
Translates to: FDDFPPIHTNSVLTFQDVKVSEC*WCIGQQ
Trigger: TTGTTGTCCTATGCACCATCAACATTCACTTACTTT...AACATCCTGGAATGTTAAAACAGAGTTTGTATGTATAGGAGGAAAGTCATCGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR TCA 90 bp TTCGATGACTTTCCTCCTATACATACAAACTCTGTTTTAACATTCCAGGATGTTTTGAGCTCAAGAATTTaGGAACAGCCTGGAAAATAT +
Preference number: 4 (lower is better)
Translates to: FDDFPPIHTNSVLTFQDVLSSRI*EQPGKY
Trigger: ATATTTTCCAGGCTGTTCTCAAATTCTTGAGCTCAA...AACATCCTGGAATGTTAAAACAGAGTTTGTATGTATAGGAGGAAAGTCATCGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS-3UTR GCA 90 bp TTCGATGACTTTCCTCCTATACATACAAACTCTGTTTTAACATTCCAGGATGTTTGCCATAACATCTTTTaGAAACCAGATCATCTGCAT +
Preference number: 4 (lower is better)
Translates to: FDDFPPIHTNSVLTFQDVCHNIF*KPDHLH
Trigger: ATGCAGATGATCTGGTTTGCAAAAGATGTTATGGCA...AACATCCTGGAATGTTAAAACAGAGTTTGTATGTATAGGAGGAAAGTCATCGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CCA 90 bp TTCGATGACTTTCCTCCTATACATACAAACTCTGTTTTAACATTCCAGGATGTTTTTTTAAAGATAATTTaGCGAGTAGGGGCTTGGGAA +
Preference number: 4 (lower is better)
Translates to: FDDFPPIHTNSVLTFQDVFLKII*RVGAWE
Trigger: TTCCCAAGCCCCTACTCGCCAAATTATCTTTAAAAA...AACATCCTGGAATGTTAAAACAGAGTTTGTATGTATAGGAGGAAAGTCATCGAA
36% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS-3UTR CCA 90 bp TTCGATGACTTTCCTCCTATACATACAAACTCTGTTTTAACATTCCAGGATGTTGTTGTGCAGGAGGACTaGAGTTTTATTATTACTCAA +
Preference number: 4 (lower is better)
Translates to: FDDFPPIHTNSVLTFQDVVVQED*SFIITQ
Trigger: TTGAGTAATAATAAAACTCCAGTCCTCCTGCACAAC...AACATCCTGGAATGTTAAAACAGAGTTTGTATGTATAGGAGGAAAGTCATCGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS-3UTR GCA 90 bp TTCGATGACTTTCCTCCTATACATACAAACTCTGTTTTAACATTCCAGGATGTTAAGGCCTACTGTTCTTaGACTGCTATAAAAATATTC +
Preference number: 4 (lower is better)
Translates to: FDDFPPIHTNSVLTFQDVKAYCS*TAIKIF
Trigger: GAATATTTTTATAGCAGTGCAAGAACAGTAGGCCTT...AACATCCTGGAATGTTAAAACAGAGTTTGTATGTATAGGAGGAAAGTCATCGAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR GCA 90 bp TTCGATGACTTTCCTCCTATACATACAAACTCTGTTTTAACATTCCAGGATGTTGAACTGCTTCTGATATaGAAGAGAAATCATAGAGAT +
Preference number: 4 (lower is better)
Translates to: FDDFPPIHTNSVLTFQDVELLLI*KRNHRD
Trigger: ATCTCTATGATTTCTCTTGCATATCAGAAGCAGTTC...AACATCCTGGAATGTTAAAACAGAGTTTGTATGTATAGGAGGAAAGTCATCGAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CCA 90 bp TTCGATGACTTTCCTCCTATACATACAAACTCTGTTTTAACATTCCAGGATGTTATAATTTCCATTTTATaGTTAGGATCTGAGGCACCT +
Preference number: 4 (lower is better)
Translates to: FDDFPPIHTNSVLTFQDVIISIL*LGSEAP
Trigger: AGGTGCCTCAGATCCTAACCATAAAATGGAAATTAT...AACATCCTGGAATGTTAAAACAGAGTTTGTATGTATAGGAGGAAAGTCATCGAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CCA 90 bp TTCGATGACTTTCCTCCTATACATACAAACTCTGTTTTAACATTCCAGGATGTTATTCTCTATAGAATGTaGATTTTTCCCACAAGAGAC +
Preference number: 4 (lower is better)
Translates to: FDDFPPIHTNSVLTFQDVILYRM*IFPTRD
Trigger: GTCTCTTGTGGGAAAAATCCACATTCTATAGAGAAT...AACATCCTGGAATGTTAAAACAGAGTTTGTATGTATAGGAGGAAAGTCATCGAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CAA 90 bp AAAGGGGGAGCAGGTACATCACATGACAAAAGCAGGAGCAAGAGAGAGAGGCAGCTCACTCCCAGCACTTaGGGAGGTGGAGGCAGCCCA +
Preference number: 5 (lower is better)
Translates to: KGGAGTSHDKSRSKRERQLTPST*GGGGSP
Trigger: TGGGCTGCCTCCACCTCCCAAAGTGCTGGGAGTGAG...CTGCCTCTCTCTCTTGCTCCTGCTTTTGTCATGTGATGTACCTGCTCCCCCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS-3UTR CAA 90 bp AAAGGGGGAGCAGGTACATCACATGACAAAAGCAGGAGCAAGAGAGAGAGGCAGAAATTGGTAGTGCCCTaGCCCAGGGCCTCAGCCGAT +
Preference number: 5 (lower is better)
Translates to: KGGAGTSHDKSRSKRERQKLVVP*PRASAD
Trigger: ATCGGCTGAGGCCCTGGGCAAGGGCACTACCAATTT...CTGCCTCTCTCTCTTGCTCCTGCTTTTGTCATGTGATGTACCTGCTCCCCCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS CCA 90 bp CTGGGTGGGATGGCAGAACTGGTTGAGCCAGTTAACGGGTCTGGGTaGTGTCAGCTGATCCATCTAGTGCAGGGTCTGCAAAATATCTCA +
Preference number: 5 (lower is better)
Translates to: LGGMAELVEPVNGSG*CQLIHLVQGLQNIS
Trigger: TGAGATATTTTGCAGACCCTGCACTAGATGGATCAGCTGACACCACCCAGACCCGTTAACTGGCTCAACCAGTTCTGCCATCCCACCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS CCA 90 bp AAAATGAGGAAACAGGCCAGGAACAGTGGCTCACTCCCAGCACTTTaGGAGGTGGAGGCAGCCCAATTGCTTGAGCTCAAGAATTTGAGA +
Preference number: 5 (lower is better)
Translates to: KMRKQARNSGSLPAL*EVEAAQLLELKNLR
Trigger: TCTCAAATTCTTGAGCTCAAGCAATTGGGCTGCCTCCACCTCCCAAAGTGCTGGGAGTGAGCCACTGTTCCTGGCCTGTTTCCTCATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS-3UTR CAA 90 bp TGGCTATTTATTTGCCTGTACAAAAGAGTGAACTCTTATCCCTGGCCAGGCCCAGAAAGTGGCAGGGGATaGGTGGGAGTGCTACACACT +
Preference number: 5 (lower is better)
Translates to: WLFICLYKRVNSYPWPGPESGRG*VGVLHT
Trigger: AGTGTGTAGCACTCCCACCAATCCCCTGCCACTTTC...TGGGCCTGGCCAGGGATAAGAGTTCACTCTTTTGTACAGGCAAATAAATAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CAA 90 bp AAAGGGGGAGCAGGTACATCACATGACAAAAGCAGGAGCAAGAGAGAGAGGCAGATGAGAATTTATGGTTaGCAGGGCATGACTCCCCAG +
Preference number: 5 (lower is better)
Translates to: KGGAGTSHDKSRSKRERQMRIYG*QGMTPQ
Trigger: CTGGGGAGTCATGCCCTGCAAACCATAAATTCTCAT...CTGCCTCTCTCTCTTGCTCCTGCTTTTGTCATGTGATGTACCTGCTCCCCCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS TCA 90 bp CATAAAGGGGAAAGGGGAGCCGTACCTAAGCTGACTGAGATGGGCTaGGCCATTGTGGTCAAGAACAAACAGCAATCAATATTTCCTGGG +
Preference number: 5 (lower is better)
Translates to: HKGERGAVPKLTEMG*AIVVKNKQQSIFPG
Trigger: CCCAGGAAATATTGATTGCTGTTTGTTCTTGACCACAATGGCTCAGCCCATCTCAGTCAGCTTAGGTACGGCTCCCCTTTCCCCTTTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS-3UTR CAA 90 bp AAAGGGGGAGCAGGTACATCACATGACAAAAGCAGGAGCAAGAGAGAGAGGCAGGGAGACCAAGTTTTATaGTGCAGAAGAAGCTCTCAG +
Preference number: 5 (lower is better)
Translates to: KGGAGTSHDKSRSKRERQGDQVL*CRRSSQ
Trigger: CTGAGAGCTTCTTCTGCACAATAAAACTTGGTCTCC...CTGCCTCTCTCTCTTGCTCCTGCTTTTGTCATGTGATGTACCTGCTCCCCCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CAA 90 bp AAAGGGGGAGCAGGTACATCACATGACAAAAGCAGGAGCAAGAGAGAGAGGCAGAGTGTCCCTTTGGATTaGGGTTCCCTATGGCTTTTT +
Preference number: 5 (lower is better)
Translates to: KGGAGTSHDKSRSKRERQSVPLD*GSLWLF
Trigger: AAAAAGCCATAGGGAACCCAAATCCAAAGGGACACT...CTGCCTCTCTCTCTTGCTCCTGCTTTTGTCATGTGATGTACCTGCTCCCCCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CAA 90 bp CAAGAACTCACTATCATGAATACAACACCAACCCATGAGAGATCCACCCCCATATTCAGGCAGAGCTGGTaGTGCAGGAGGACTGGAGTT +
Preference number: 5 (lower is better)
Translates to: QELTIMNTTPTHERSTPIFRQSW*CRRTGV
Trigger: AACTCCAGTCCTCCTGCACAACCAGCTCTGCCTGAA...TATGGGGGTGGATCTCTCATGGGTTGGTGTTGTATTCATGATAGTGAGTTCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS-3UTR CAA 90 bp CAAGAACTCACTATCATGAATACAACACCAACCCATGAGAGATCCACCCCCATAGTGGGTATTTCTGGATaGCATTGGGCAGAAGGGTCC +
Preference number: 5 (lower is better)
Translates to: QELTIMNTTPTHERSTPIVGISG*HWAEGS
Trigger: GGACCCTTCTGCCCAATGCAATCCAGAAATACCCAC...TATGGGGGTGGATCTCTCATGGGTTGGTGTTGTATTCATGATAGTGAGTTCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302040.6
CDS-3UTR CAA 90 bp AAAGGGGGAGCAGGTACATCACATGACAAAAGCAGGAGCAAGAGAGAGAGGCAGCTCCAGCACTGGAGATaGCAATTAAACATGAGATGT +
Preference number: 5 (lower is better)
Translates to: KGGAGTSHDKSRSKRERQLQHWR*QLNMRC
Trigger: ACATCTCATGTTTAATTGCAATCTCCAGTGCTGGAG...CTGCCTCTCTCTCTTGCTCCTGCTTTTGTCATGTGATGTACCTGCTCCCCCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CAA 90 bp TATGCCAGGCACTGGGCTAAGCCCTCTTTATGCATATTCTCACTTAATTGTTGTGCTTGGGGAGAAAAATaGGTAGTGCCCTTGCCCAGG +
Preference number: 5 (lower is better)
Translates to: YARHWAKPSLCIFSLNCCAWGEK*VVPLPR
Trigger: CCTGGGCAAGGGCACTACCAATTTTTCTCCCCAAGC...ACAACAATTAAGTGAGAATATGCATAAAGAGGGCTTAGCCCAGTGCCTGGCATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CAA 90 bp TGGCTATTTATTTGCCTGTACAAAAGAGTGAACTCTTATCCCTGGCCAGGCCCATCAGGTTGCCCCTGCTaGCTTTTATGTCAGGGAGAT +
Preference number: 5 (lower is better)
Translates to: WLFICLYKRVNSYPWPGPSGCPC*LLCQGD
Trigger: ATCTCCCTGACATAAAAGCAAGCAGGGGCAACCTGA...TGGGCCTGGCCAGGGATAAGAGTTCACTCTTTTGTACAGGCAAATAAATAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CAA 90 bp AAAGGGGGAGCAGGTACATCACATGACAAAAGCAGGAGCAAGAGAGAGAGGCAGAACTTGCTGAGGACTTaGGAAAAGTCATTTCTCCAG +
Preference number: 5 (lower is better)
Translates to: KGGAGTSHDKSRSKRERQNLLRT*EKSFLQ
Trigger: CTGGAGAAATGACTTTTCCAAAGTCCTCAGCAAGTT...CTGCCTCTCTCTCTTGCTCCTGCTTTTGTCATGTGATGTACCTGCTCCCCCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CAA 90 bp AAAGGGGGAGCAGGTACATCACATGACAAAAGCAGGAGCAAGAGAGAGAGGCAGAGCTCCATTCATAACTaGCTGAGGACTTTGGAAAAG +
Preference number: 5 (lower is better)
Translates to: KGGAGTSHDKSRSKRERQSSIHN*LRTLEK
Trigger: CTTTTCCAAAGTCCTCAGCAAGTTATGAATGGAGCT...CTGCCTCTCTCTCTTGCTCCTGCTTTTGTCATGTGATGTACCTGCTCCCCCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CAA 90 bp TGGCTATTTATTTGCCTGTACAAAAGAGTGAACTCTTATCCCTGGCCAGGCCCAATGAGAATTTATGGTTaGCAGGGCATGACTCCCCAG +
Preference number: 5 (lower is better)
Translates to: WLFICLYKRVNSYPWPGPMRIYG*QGMTPQ
Trigger: CTGGGGAGTCATGCCCTGCAAACCATAAATTCTCAT...TGGGCCTGGCCAGGGATAAGAGTTCACTCTTTTGTACAGGCAAATAAATAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CAA 90 bp TGGCTATTTATTTGCCTGTACAAAAGAGTGAACTCTTATCCCTGGCCAGGCCCATGCAAGATAGTCAGGTaGCCCCTGCTTGCTTTTATG +
Preference number: 5 (lower is better)
Translates to: WLFICLYKRVNSYPWPGPCKIVR*PLLAFM
Trigger: CATAAAAGCAAGCAGGGGCAACCTGACTATCTTGCA...TGGGCCTGGCCAGGGATAAGAGTTCACTCTTTTGTACAGGCAAATAAATAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CAA 90 bp AAAGGGGGAGCAGGTACATCACATGACAAAAGCAGGAGCAAGAGAGAGAGGCAGATCAAGACAGGGGAATaGCAATGGAGAAAGAGTAAT +
Preference number: 5 (lower is better)
Translates to: KGGAGTSHDKSRSKRERQIKTGE*QWRKSN
Trigger: ATTACTCTTTCTCCATTGCAATTCCCCTGTCTTGAT...CTGCCTCTCTCTCTTGCTCCTGCTTTTGTCATGTGATGTACCTGCTCCCCCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS-3UTR CAA 90 bp CAAGAACTCACTATCATGAATACAACACCAACCCATGAGAGATCCACCCCCATAAGATGGGCTGAGCCATaGTGGTCAAGAACAAACAGC +
Preference number: 5 (lower is better)
Translates to: QELTIMNTTPTHERSTPIRWAEP*WSRTNS
Trigger: GCTGTTTGTTCTTGACCACAATGGCTCAGCCCATCT...TATGGGGGTGGATCTCTCATGGGTTGGTGTTGTATTCATGATAGTGAGTTCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS TCA 90 bp GGTAAGCCCATACATATCTGGCAGTTAAGAAAGACAGACTGGCACTaGTGTAAGATCAAAATGAGGAAACAGGCCAGGAACAGTGGCTCA +
Preference number: 5 (lower is better)
Translates to: GKPIHIWQLRKTDWH*CKIKMRKQARNSGS
Trigger: TGAGCCACTGTTCCTGGCCTGTTTCCTCATTTTGATCTTACATCAGTGCCAGTCTGTCTTTCTTAACTGCCAGATATGTATGGGCTTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS GCA 90 bp CTTCCCTACCAGAATGTAAGTTACTCAAAGACAGGCAGGGAGTTTTaGCCATTCTGTTTCCTGATCTATCCTTGTAACCACCCAATGGGT +
Preference number: 5 (lower is better)
Translates to: LPYQNVSYSKTGREF*PFCFLIYPCNHPMG
Trigger: ACCCATTGGGTGGTTACAAGGATAGATCAGGAAACAGAATGGGCAAAACTCCCTGCCTGTCTTTGAGTAACTTACATTCTGGTAGGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS-3UTR CAA 90 bp CAAGAACTCACTATCATGAATACAACACCAACCCATGAGAGATCCACCCCCATAATATGGGTGCACCTGTaGGCTGAGACTGATATGTCT +
Preference number: 5 (lower is better)
Translates to: QELTIMNTTPTHERSTPIIWVHL*AETDMS
Trigger: AGACATATCAGTCTCAGCCAACAGGTGCACCCATAT...TATGGGGGTGGATCTCTCATGGGTTGGTGTTGTATTCATGATAGTGAGTTCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CAA 90 bp TGGCTATTTATTTGCCTGTACAAAAGAGTGAACTCTTATCCCTGGCCAGGCCCAAGTGTCCCTTTGGATTaGGGTTCCCTATGGCTTTTT +
Preference number: 5 (lower is better)
Translates to: WLFICLYKRVNSYPWPGPSVPLD*GSLWLF
Trigger: AAAAAGCCATAGGGAACCCAAATCCAAAGGGACACT...TGGGCCTGGCCAGGGATAAGAGTTCACTCTTTTGTACAGGCAAATAAATAGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CAA 90 bp CAGATAGCTATTCTGAGCTTGGTTAACTTCAGTCCATCTGGAAAAGATTTTTGGGGATGGCAGAACTGGTaGAGCCAGTTAACGGGTCTG +
Preference number: 5 (lower is better)
Translates to: QIAILSLVNFSPSGKDFWGWQNW*SQLTGL
Trigger: CAGACCCGTTAACTGGCTCAACCAGTTCTGCCATCC...CCAAAAATCTTTTCCAGATGGACTGAAGTTAACCAAGCTCAGAATAGCTATCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS-3UTR CAA 90 bp TATGCCAGGCACTGGGCTAAGCCCTCTTTATGCATATTCTCACTTAATTGTTGTATATGGGTGCACCTGTaGGCTGAGACTGATATGTCT +
Preference number: 5 (lower is better)
Translates to: YARHWAKPSLCIFSLNCCIWVHL*AETDMS
Trigger: AGACATATCAGTCTCAGCCAACAGGTGCACCCATAT...ACAACAATTAAGTGAGAATATGCATAAAGAGGGCTTAGCCCAGTGCCTGGCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CAA 90 bp TGGCTATTTATTTGCCTGTACAAAAGAGTGAACTCTTATCCCTGGCCAGGCCCAAGACTTACATTCTTCTaGGTAGTTGGGCAAACTGCA +
Preference number: 5 (lower is better)
Translates to: WLFICLYKRVNSYPWPGPRLTFF*VVGQTA
Trigger: TGCAGTTTGCCCAACTACCAAGAAGAATGTAAGTCT...TGGGCCTGGCCAGGGATAAGAGTTCACTCTTTTGTACAGGCAAATAAATAGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CAA 90 bp TTCGATGACTTTCCTCCTATACATACAAACTCTGTTTTAACATTCCAGGATGTTAAATTGGTAGTGCCCTaGCCCAGGGCCTCAGCCGAT +
Preference number: 5 (lower is better)
Translates to: FDDFPPIHTNSVLTFQDVKLVVP*PRASAD
Trigger: ATCGGCTGAGGCCCTGGGCAAGGGCACTACCAATTT...AACATCCTGGAATGTTAAAACAGAGTTTGTATGTATAGGAGGAAAGTCATCGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CAA 90 bp TATGCCAGGCACTGGGCTAAGCCCTCTTTATGCATATTCTCACTTAATTGTTGTTGCAAGATAGTCAGGTaGCCCCTGCTTGCTTTTATG +
Preference number: 5 (lower is better)
Translates to: YARHWAKPSLCIFSLNCCCKIVR*PLLAFM
Trigger: CATAAAAGCAAGCAGGGGCAACCTGACTATCTTGCA...ACAACAATTAAGTGAGAATATGCATAAAGAGGGCTTAGCCCAGTGCCTGGCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CAA 90 bp TGGCTATTTATTTGCCTGTACAAAAGAGTGAACTCTTATCCCTGGCCAGGCCCAAACTTGCTGAGGACTTaGGAAAAGTCATTTCTCCAG +
Preference number: 5 (lower is better)
Translates to: WLFICLYKRVNSYPWPGPNLLRT*EKSFLQ
Trigger: CTGGAGAAATGACTTTTCCAAAGTCCTCAGCAAGTT...TGGGCCTGGCCAGGGATAAGAGTTCACTCTTTTGTACAGGCAAATAAATAGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CAA 90 bp TGGCTATTTATTTGCCTGTACAAAAGAGTGAACTCTTATCCCTGGCCAGGCCCATTGACATATTCCATTTaGGTGGAGGAAATCCAGGCA +
Preference number: 5 (lower is better)
Translates to: WLFICLYKRVNSYPWPGPLTYSI*VEEIQA
Trigger: TGCCTGGATTTCCTCCACCAAAATGGAATATGTCAA...TGGGCCTGGCCAGGGATAAGAGTTCACTCTTTTGTACAGGCAAATAAATAGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS GCA 90 bp GTTGCCATAACATCTTTTGCAAACCAGATCATCTGCATTTCCCACTaGTCCATGGCTGGTTTCTCGTTCCATCAATTTCTTATGCTTTGG +
Preference number: 5 (lower is better)
Translates to: VAITSFANQIICISH*SMAGFSFHQFLMLW
Trigger: CCAAAGCATAAGAAATTGATGGAACGAGAAACCAGCCATGGAGCAGTGGGAAATGCAGATGATCTGGTTTGCAAAAGATGTTATGGCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS CCA 90 bp GGGCTGAGCCATTGTGGTCAAGAACAAACAGCAATCAATATTTCCTaGGCAAGAAAAGCAGCAGGGAGAAGAGGGTTCATTCAATATTTA +
Preference number: 5 (lower is better)
Translates to: GLSHCGQEQTAINIS*ARKAAGRRGFIQYL
Trigger: TAAATATTGAATGAACCCTCTTCTCCCTGCTGCTTTTCTTGCCCAGGAAATATTGATTGCTGTTTGTTCTTGACCACAATGGCTCAGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS-3UTR CAA 90 bp TGGCTATTTATTTGCCTGTACAAAAGAGTGAACTCTTATCCCTGGCCAGGCCCATTTGTCACAATTGTGTaGTTCCTTCCTACAGCCATA +
Preference number: 5 (lower is better)
Translates to: WLFICLYKRVNSYPWPGPFVTIV*FLPTAI
Trigger: TATGGCTGTAGGAAGGAACAACACAATTGTGACAAA...TGGGCCTGGCCAGGGATAAGAGTTCACTCTTTTGTACAGGCAAATAAATAGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CAA 90 bp CAAGAACTCACTATCATGAATACAACACCAACCCATGAGAGATCCACCCCCATACTCCAGCACTGGAGATaGCAATTAAACATGAGATGT +
Preference number: 5 (lower is better)
Translates to: QELTIMNTTPTHERSTPILQHWR*QLNMRC
Trigger: ACATCTCATGTTTAATTGCAATCTCCAGTGCTGGAG...TATGGGGGTGGATCTCTCATGGGTTGGTGTTGTATTCATGATAGTGAGTTCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CAA 90 bp TTCGATGACTTTCCTCCTATACATACAAACTCTGTTTTAACATTCCAGGATGTTGAAAGTGGCAGGGGATaGGTGGGAGTGCTACACACT +
Preference number: 5 (lower is better)
Translates to: FDDFPPIHTNSVLTFQDVESGRG*VGVLHT
Trigger: AGTGTGTAGCACTCCCACCAATCCCCTGCCACTTTC...AACATCCTGGAATGTTAAAACAGAGTTTGTATGTATAGGAGGAAAGTCATCGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CAA 90 bp CAGATAGCTATTCTGAGCTTGGTTAACTTCAGTCCATCTGGAAAAGATTTTTGGTCAGGTTGCCCCTGCTaGCTTTTATGTCAGGGAGAT +
Preference number: 5 (lower is better)
Translates to: QIAILSLVNFSPSGKDFWSGCPC*LLCQGD
Trigger: ATCTCCCTGACATAAAAGCAAGCAGGGGCAACCTGA...CCAAAAATCTTTTCCAGATGGACTGAAGTTAACCAAGCTCAGAATAGCTATCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CAA 90 bp CAGATAGCTATTCTGAGCTTGGTTAACTTCAGTCCATCTGGAAAAGATTTTTGGGACTTTTGGATTGCATaGGGCAGAAGGGTCCTGCAA +
Preference number: 5 (lower is better)
Translates to: QIAILSLVNFSPSGKDFWDFWIA*GRRVLQ
Trigger: TTGCAGGACCCTTCTGCCCAATGCAATCCAAAAGTC...CCAAAAATCTTTTCCAGATGGACTGAAGTTAACCAAGCTCAGAATAGCTATCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000641361.1
CDS-3UTR CAA 90 bp TATGCCAGGCACTGGGCTAAGCCCTCTTTATGCATATTCTCACTTAATTGTTGTTGGGAAAGGAGAGGGTaGAATCAGATGAGTTTGAAG +
Preference number: 5 (lower is better)
Translates to: YARHWAKPSLCIFSLNCCWERRG*NQMSLK
Trigger: CTTCAAACTCATCTGATTCAACCCTCTCCTTTCCCA...ACAACAATTAAGTGAGAATATGCATAAAGAGGGCTTAGCCCAGTGCCTGGCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CAA 90 bp TGGCTATTTATTTGCCTGTACAAAAGAGTGAACTCTTATCCCTGGCCAGGCCCATATGCTCTATGCTTGTaGACCAAAAGAGAATCCATC +
Preference number: 5 (lower is better)
Translates to: WLFICLYKRVNSYPWPGPYALCL*TKRESI
Trigger: GATGGATTCTCTTTTGGTCAACAAGCATAGAGCATA...TGGGCCTGGCCAGGGATAAGAGTTCACTCTTTTGTACAGGCAAATAAATAGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CAA 90 bp CAAGAACTCACTATCATGAATACAACACCAACCCATGAGAGATCCACCCCCATACCATATGCTCTATGCTaGTTGACCAAAAGAGAATCC +
Preference number: 5 (lower is better)
Translates to: QELTIMNTTPTHERSTPIPYALC*LTKRES
Trigger: GGATTCTCTTTTGGTCAACAAGCATAGAGCATATGG...TATGGGGGTGGATCTCTCATGGGTTGGTGTTGTATTCATGATAGTGAGTTCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CAA 90 bp TTCGATGACTTTCCTCCTATACATACAAACTCTGTTTTAACATTCCAGGATGTTGCTGGACTTACTGGATaGCATTGGGCAGAAGGGTCC +
Preference number: 5 (lower is better)
Translates to: FDDFPPIHTNSVLTFQDVAGLTG*HWAEGS
Trigger: GGACCCTTCTGCCCAATGCAATCCAGTAAGTCCAGC...AACATCCTGGAATGTTAAAACAGAGTTTGTATGTATAGGAGGAAAGTCATCGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS GCA 90 bp CTGGACTTACTGGATTGCATTGGGCAGAAGGGTCCTGCAATCTTGTaGTACAAGAGAAGAAATATTGATTGCTTTGTTGCCATAACATCT +
Preference number: 5 (lower is better)
Translates to: LDLLDCIGQKGPAIL*YKRRNIDCFVAITS
Trigger: AGATGTTATGGCAACAAAGCAATCAATATTTCTTCTCTTGTAGCACAAGATTGCAGGACCCTTCTGCCCAATGCAATCCAGTAAGTCCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS-3UTR CAA 90 bp TATGCCAGGCACTGGGCTAAGCCCTCTTTATGCATATTCTCACTTAATTGTTGTGGAATCTCCGCTCCTTaGTTAACAAGTCTTCCAAAT +
Preference number: 5 (lower is better)
Translates to: YARHWAKPSLCIFSLNCCGISAP*LTSLPN
Trigger: ATTTGGAAGACTTGTTAACAAAGGAGCGGAGATTCC...ACAACAATTAAGTGAGAATATGCATAAAGAGGGCTTAGCCCAGTGCCTGGCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CAA 90 bp CAAGAACTCACTATCATGAATACAACACCAACCCATGAGAGATCCACCCCCATAGTTTACCAGAAGGGTTaGGCCTATGACTTACTATAT +
Preference number: 5 (lower is better)
Translates to: QELTIMNTTPTHERSTPIVYQKG*AYDLLY
Trigger: ATATAGTAAGTCATAGGCCAAACCCTTCTGGTAAAC...TATGGGGGTGGATCTCTCATGGGTTGGTGTTGTATTCATGATAGTGAGTTCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS-3UTR CAA 90 bp CAAGAACTCACTATCATGAATACAACACCAACCCATGAGAGATCCACCCCCATAAATCTTGCAGCTAATTaGTTAGTCCTGCAAAGACAG +
Preference number: 5 (lower is better)
Translates to: QELTIMNTTPTHERSTPINLAAN*LVLQRQ
Trigger: CTGTCTTTGCAGGACTAACAAATTAGCTGCAAGATT...TATGGGGGTGGATCTCTCATGGGTTGGTGTTGTATTCATGATAGTGAGTTCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS-3UTR CAA 90 bp CAGATAGCTATTCTGAGCTTGGTTAACTTCAGTCCATCTGGAAAAGATTTTTGGCGAAGTGAGTTTTTCTaGCTGTCTTCTGTTCCTGGG +
Preference number: 5 (lower is better)
Translates to: QIAILSLVNFSPSGKDFWRSEFF*LSSVPG
Trigger: CCCAGGAACAGAAGACAGCAAGAAAAACTCACTTCG...CCAAAAATCTTTTCCAGATGGACTGAAGTTAACCAAGCTCAGAATAGCTATCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS-3UTR CAA 90 bp CAAGAACTCACTATCATGAATACAACACCAACCCATGAGAGATCCACCCCCATACTTGAGCTCAAGAATTaGAGAACAGCCTGGAAAATA +
Preference number: 5 (lower is better)
Translates to: QELTIMNTTPTHERSTPILELKN*RTAWKI
Trigger: TATTTTCCAGGCTGTTCTCAAATTCTTGAGCTCAAG...TATGGGGGTGGATCTCTCATGGGTTGGTGTTGTATTCATGATAGTGAGTTCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS-3UTR CAA 90 bp CAGATAGCTATTCTGAGCTTGGTTAACTTCAGTCCATCTGGAAAAGATTTTTGGAAGCAAGGGACAACTTaGATGTCATCAGGCCAGAAC +
Preference number: 5 (lower is better)
Translates to: QIAILSLVNFSPSGKDFWKQGTT*MSSGQN
Trigger: GTTCTGGCCTGATGACATCAAAGTTGTCCCTTGCTT...CCAAAAATCTTTTCCAGATGGACTGAAGTTAACCAAGCTCAGAATAGCTATCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS TCA 90 bp GGGTTCATTCAATATTTAAAGACAGTGATAAGCAAGGGACAACTTTaGTGTCATCAGGCCAGAACAGACGATGACTATGAAGACAAGAGG +
Preference number: 5 (lower is better)
Translates to: GFIQYLKTVISKGQL*CHQARTDDDYEDKR
Trigger: CCTCTTGTCTTCATAGTCATCGTCTGTTCTGGCCTGATGACATCAAAGTTGTCCCTTGCTTATCACTGTCTTTAAATATTGAATGAACCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS GCA 90 bp ATTGATTGCTTTGTTGCCATAACATCTTTTGCAAACCAGATCATCTaGATTTCCCACTGCTCCATGGCTGGTTTCTCGTTCCATCAATTT +
Preference number: 5 (lower is better)
Translates to: IDCFVAITSFANQII*ISHCSMAGFSFHQF
Trigger: AAATTGATGGAACGAGAAACCAGCCATGGAGCAGTGGGAAATGCAGATGATCTGGTTTGCAAAAGATGTTATGGCAACAAAGCAATCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS GCA 90 bp TGGGTATTTCTGGATTGCATTGGGCAGAAGGGTCCTGCAATCTTGTaGTACAAGAGAAGAAATATTGATTGCTTTGTTGCCATAACATCT +
Preference number: 5 (lower is better)
Translates to: WVFLDCIGQKGPAIL*YKRRNIDCFVAITS
Trigger: AGATGTTATGGCAACAAAGCAATCAATATTTCTTCTCTTGTAGCACAAGATTGCAGGACCCTTCTGCCCAATGCAATCCAGAAATACCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302040.6
CDS-3UTR CAA 90 bp TATGCCAGGCACTGGGCTAAGCCCTCTTTATGCATATTCTCACTTAATTGTTGTGGTGTGGCTATTTATTaGCCTGTACAAAAGAGTGAA +
Preference number: 5 (lower is better)
Translates to: YARHWAKPSLCIFSLNCCGVAIY*PVQKSE
Trigger: TTCACTCTTTTGTACAGGCAAATAAATAGCCACACC...ACAACAATTAAGTGAGAATATGCATAAAGAGGGCTTAGCCCAGTGCCTGGCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CAA 90 bp CAGATAGCTATTCTGAGCTTGGTTAACTTCAGTCCATCTGGAAAAGATTTTTGGTGGGAAAGGAGAGGGTaGAATCAGATGAGTTTGAAG +
Preference number: 5 (lower is better)
Translates to: QIAILSLVNFSPSGKDFWWERRG*NQMSLK
Trigger: CTTCAAACTCATCTGATTCAACCCTCTCCTTTCCCA...CCAAAAATCTTTTCCAGATGGACTGAAGTTAACCAAGCTCAGAATAGCTATCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CAA 90 bp TTCGATGACTTTCCTCCTATACATACAAACTCTGTTTTAACATTCCAGGATGTTACTTACTGGATTGCATaGGGCAGAAGGGTCCTGCAA +
Preference number: 5 (lower is better)
Translates to: FDDFPPIHTNSVLTFQDVTYWIA*GRRVLQ
Trigger: TTGCAGGACCCTTCTGCCCAATGCAATCCAGTAAGT...AACATCCTGGAATGTTAAAACAGAGTTTGTATGTATAGGAGGAAAGTCATCGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS-3UTR CAA 90 bp CAGATAGCTATTCTGAGCTTGGTTAACTTCAGTCCATCTGGAAAAGATTTTTGGGGAATCTCCGCTCCTTaGTTAACAAGTCTTCCAAAT +
Preference number: 5 (lower is better)
Translates to: QIAILSLVNFSPSGKDFWGISAP*LTSLPN
Trigger: ATTTGGAAGACTTGTTAACAAAGGAGCGGAGATTCC...CCAAAAATCTTTTCCAGATGGACTGAAGTTAACCAAGCTCAGAATAGCTATCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CAA 90 bp CAGATAGCTATTCTGAGCTTGGTTAACTTCAGTCCATCTGGAAAAGATTTTTGGAAGGGTCCTGCAATCTaGTGCTACAAGAGAAGAAAT +
Preference number: 5 (lower is better)
Translates to: QIAILSLVNFSPSGKDFWKGPAI*CYKRRN
Trigger: ATTTCTTCTCTTGTAGCACAAGATTGCAGGACCCTT...CCAAAAATCTTTTCCAGATGGACTGAAGTTAACCAAGCTCAGAATAGCTATCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CAA 90 bp TTCGATGACTTTCCTCCTATACATACAAACTCTGTTTTAACATTCCAGGATGTTTATTTCTGGATTGCATaGGGCAGAAGGGTCCTGCAA +
Preference number: 5 (lower is better)
Translates to: FDDFPPIHTNSVLTFQDVYFWIA*GRRVLQ
Trigger: TTGCAGGACCCTTCTGCCCAATGCAATCCAGAAATA...AACATCCTGGAATGTTAAAACAGAGTTTGTATGTATAGGAGGAAAGTCATCGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302040.6
CDS-3UTR CAA 90 bp TTCGATGACTTTCCTCCTATACATACAAACTCTGTTTTAACATTCCAGGATGTTATGAGAATTTATGGTTaGCAGGGCATGACTCCCCAG +
Preference number: 5 (lower is better)
Translates to: FDDFPPIHTNSVLTFQDVMRIYG*QGMTPQ
Trigger: CTGGGGAGTCATGCCCTGCAAACCATAAATTCTCAT...AACATCCTGGAATGTTAAAACAGAGTTTGTATGTATAGGAGGAAAGTCATCGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CAA 90 bp CAGATAGCTATTCTGAGCTTGGTTAACTTCAGTCCATCTGGAAAAGATTTTTGGAGACTTACATTCTTCTaGGTAGTTGGGCAAACTGCA +
Preference number: 5 (lower is better)
Translates to: QIAILSLVNFSPSGKDFWRLTFF*VVGQTA
Trigger: TGCAGTTTGCCCAACTACCAAGAAGAATGTAAGTCT...CCAAAAATCTTTTCCAGATGGACTGAAGTTAACCAAGCTCAGAATAGCTATCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CAA 90 bp CAGATAGCTATTCTGAGCTTGGTTAACTTCAGTCCATCTGGAAAAGATTTTTGGAGCTCCATTCATAACTaGCTGAGGACTTTGGAAAAG +
Preference number: 5 (lower is better)
Translates to: QIAILSLVNFSPSGKDFWSSIHN*LRTLEK
Trigger: CTTTTCCAAAGTCCTCAGCAAGTTATGAATGGAGCT...CCAAAAATCTTTTCCAGATGGACTGAAGTTAACCAAGCTCAGAATAGCTATCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CAA 90 bp TTCGATGACTTTCCTCCTATACATACAAACTCTGTTTTAACATTCCAGGATGTTTTTGCCCATGCATGTTaGCACCCAATGGTAACTGTG +
Preference number: 5 (lower is better)
Translates to: FDDFPPIHTNSVLTFQDVFAHAC*HPMVTV
Trigger: CACAGTTACCATTGGGTGCAAACATGCATGGGCAAA...AACATCCTGGAATGTTAAAACAGAGTTTGTATGTATAGGAGGAAAGTCATCGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS TCA 90 bp AGGAAAGAGCTGCTATTAATTTTGTTTCAGAGTCAAACCATGAACTaGATTCCTTCCCAAAGTTACTTCAGCTTATGCCCAAGAATGGAC +
Preference number: 5 (lower is better)
Translates to: RKELLLILFQSQTMN*IPSQSYFSLCPRMD
Trigger: GTCCATTCTTGGGCATAAGCTGAAGTAACTTTGGGAAGGAATTCAGTTCATGGTTTGACTCTGAAACAAAATTAATAGCAGCTCTTTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS GCA 90 bp TTTAGACTTTTGGATTGCATTGGGCAGAAGGGTCCTGCAATCTTGTaGTACAAGAGAAGAAATATTGATTGCTTTGTTGCCATAACATCT +
Preference number: 5 (lower is better)
Translates to: FRLLDCIGQKGPAIL*YKRRNIDCFVAITS
Trigger: AGATGTTATGGCAACAAAGCAATCAATATTTCTTCTCTTGTAGCACAAGATTGCAGGACCCTTCTGCCCAATGCAATCCAAAAGTCTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641361.1
CDS-3UTR CAA 90 bp CAGATAGCTATTCTGAGCTTGGTTAACTTCAGTCCATCTGGAAAAGATTTTTGGTTTGTCACAATTGTGTaGTTCCTTCCTACAGCCATA +
Preference number: 5 (lower is better)
Translates to: QIAILSLVNFSPSGKDFWFVTIV*FLPTAI
Trigger: TATGGCTGTAGGAAGGAACAACACAATTGTGACAAA...CCAAAAATCTTTTCCAGATGGACTGAAGTTAACCAAGCTCAGAATAGCTATCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CAA 90 bp TTCGATGACTTTCCTCCTATACATACAAACTCTGTTTTAACATTCCAGGATGTTGGAGACCAAGTTTTATaGTGCAGAAGAAGCTCTCAG +
Preference number: 5 (lower is better)
Translates to: FDDFPPIHTNSVLTFQDVGDQVL*CRRSSQ
Trigger: CTGAGAGCTTCTTCTGCACAATAAAACTTGGTCTCC...AACATCCTGGAATGTTAAAACAGAGTTTGTATGTATAGGAGGAAAGTCATCGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CAA 90 bp CAGATAGCTATTCTGAGCTTGGTTAACTTCAGTCCATCTGGAAAAGATTTTTGGGGTGTGGCTATTTATTaGCCTGTACAAAAGAGTGAA +
Preference number: 5 (lower is better)
Translates to: QIAILSLVNFSPSGKDFWGVAIY*PVQKSE
Trigger: TTCACTCTTTTGTACAGGCAAATAAATAGCCACACC...CCAAAAATCTTTTCCAGATGGACTGAAGTTAACCAAGCTCAGAATAGCTATCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CAA 90 bp CAGATAGCTATTCTGAGCTTGGTTAACTTCAGTCCATCTGGAAAAGATTTTTGGGGAAGTAAGAGGAATTaGGTATCTCTTATCTTGGTG +
Preference number: 5 (lower is better)
Translates to: QIAILSLVNFSPSGKDFWGSKRN*VSLILV
Trigger: CACCAAGATAAGAGATACCAAATTCCTCTTACTTCC...CCAAAAATCTTTTCCAGATGGACTGAAGTTAACCAAGCTCAGAATAGCTATCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS-3UTR CAA 90 bp CAGATAGCTATTCTGAGCTTGGTTAACTTCAGTCCATCTGGAAAAGATTTTTGGCAAGACGAGCCTAGATaGATCTTCACTAAAACATCA +
Preference number: 5 (lower is better)
Translates to: QIAILSLVNFSPSGKDFWQDEPR*IFTKTS
Trigger: TGATGTTTTAGTGAAGATCAATCTAGGCTCGTCTTG...CCAAAAATCTTTTCCAGATGGACTGAAGTTAACCAAGCTCAGAATAGCTATCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS-3UTR CAA 90 bp TTCGATGACTTTCCTCCTATACATACAAACTCTGTTTTAACATTCCAGGATGTTGGAATCTCCGCTCCTTaGTTAACAAGTCTTCCAAAT +
Preference number: 5 (lower is better)
Translates to: FDDFPPIHTNSVLTFQDVGISAP*LTSLPN
Trigger: ATTTGGAAGACTTGTTAACAAAGGAGCGGAGATTCC...AACATCCTGGAATGTTAAAACAGAGTTTGTATGTATAGGAGGAAAGTCATCGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CAA 90 bp TTCGATGACTTTCCTCCTATACATACAAACTCTGTTTTAACATTCCAGGATGTTAAGGGTCCTGCAATCTaGTGCTACAAGAGAAGAAAT +
Preference number: 5 (lower is better)
Translates to: FDDFPPIHTNSVLTFQDVKGPAI*CYKRRN
Trigger: ATTTCTTCTCTTGTAGCACAAGATTGCAGGACCCTT...AACATCCTGGAATGTTAAAACAGAGTTTGTATGTATAGGAGGAAAGTCATCGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CAA 90 bp TTCGATGACTTTCCTCCTATACATACAAACTCTGTTTTAACATTCCAGGATGTTCTCCAGCACTGGAGATaGCAATTAAACATGAGATGT +
Preference number: 5 (lower is better)
Translates to: FDDFPPIHTNSVLTFQDVLQHWR*QLNMRC
Trigger: ACATCTCATGTTTAATTGCAATCTCCAGTGCTGGAG...AACATCCTGGAATGTTAAAACAGAGTTTGTATGTATAGGAGGAAAGTCATCGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CAA 90 bp TTCGATGACTTTCCTCCTATACATACAAACTCTGTTTTAACATTCCAGGATGTTAGACTTACATTCTTCTaGGTAGTTGGGCAAACTGCA +
Preference number: 5 (lower is better)
Translates to: FDDFPPIHTNSVLTFQDVRLTFF*VVGQTA
Trigger: TGCAGTTTGCCCAACTACCAAGAAGAATGTAAGTCT...AACATCCTGGAATGTTAAAACAGAGTTTGTATGTATAGGAGGAAAGTCATCGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CAA 90 bp TTCGATGACTTTCCTCCTATACATACAAACTCTGTTTTAACATTCCAGGATGTTCCATATGCTCTATGCTaGTTGACCAAAAGAGAATCC +
Preference number: 5 (lower is better)
Translates to: FDDFPPIHTNSVLTFQDVPYALC*LTKRES
Trigger: GGATTCTCTTTTGGTCAACAAGCATAGAGCATATGG...AACATCCTGGAATGTTAAAACAGAGTTTGTATGTATAGGAGGAAAGTCATCGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641361.1
ENST00000641673.1
CDS TCA 90 bp TTCAGAGGAAGTCAGCCTAGGATAATCCATATGCTCTATGCTTGTTaGCCAAAAGAGAATCCATCTAATAATAAAGTAGAAACTGATTGG +
Preference number: 5 (lower is better)
Translates to: FRGSQPRIIHMLYAC*PKENPSNNKVETDW
Trigger: CCAATCAGTTTCTACTTTATTATTAGATGGATTCTCTTTTGGTCAACAAGCATAGAGCATATGGATTATCCTAGGCTGACTTCCTCTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641361.1
ENST00000641673.1
CDS GCA 90 bp TTAAGGTTGCTGTATTTTATTATTTGTATGGAATTTGTTTGCCCATaGATGTTTGCACCCAATGGTAACTGTGGTTCTGTGTCACTTATC +
Preference number: 5 (lower is better)
Translates to: LRLLYFIICMEFVCP*MFAPNGNCGSVSLI
Trigger: GATAAGTGACACAGAACCACAGTTACCATTGGGTGCAAACATGCATGGGCAAACAAATTCCATACAAATAATAAAATACAGCAACCTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS GCA 90 bp GTGAAATTAAGGTTGCTGTATTTTATTATTTGTATGGAATTTGTTTaGCCATGCATGTTTGCACCCAATGGTAACTGTGGTTCTGTGTCA +
Preference number: 5 (lower is better)
Translates to: VKLRLLYFIICMEFV*PCMFAPNGNCGSVS
Trigger: TGACACAGAACCACAGTTACCATTGGGTGCAAACATGCATGGGCAAACAAATTCCATACAAATAATAAAATACAGCAACCTTAATTTCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS-3UTR CAA 90 bp TTCGATGACTTTCCTCCTATACATACAAACTCTGTTTTAACATTCCAGGATGTTTATGCTCTATGCTTGTaGACCAAAAGAGAATCCATC +
Preference number: 5 (lower is better)
Translates to: FDDFPPIHTNSVLTFQDVYALCL*TKRESI
Trigger: GATGGATTCTCTTTTGGTCAACAAGCATAGAGCATA...AACATCCTGGAATGTTAAAACAGAGTTTGTATGTATAGGAGGAAAGTCATCGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641361.1
ENST00000641673.1
CDS-3UTR CAA 90 bp TTCGATGACTTTCCTCCTATACATACAAACTCTGTTTTAACATTCCAGGATGTTAGTGGGCTACAATTTTaGACATATTCCATTTTGGTG +
Preference number: 5 (lower is better)
Translates to: FDDFPPIHTNSVLTFQDVSGLQF*TYSILV
Trigger: CACCAAAATGGAATATGTCAAAAATTGTAGCCCACT...AACATCCTGGAATGTTAAAACAGAGTTTGTATGTATAGGAGGAAAGTCATCGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS CCA 72 bp CTTGCTGTCTTCTGTTCCTGGGTGGGATGGCAGAACTaGTTGAGCCAGTTAACGGGTCTGGGTGGTGTCAGC +
Preference number: 6 (lower is better)
Translates to: LAVFCSWVGWQN*LSQLTGLGGVS
Trigger: GCTGACACCACCCAGACCCGTTAACTGGCTCAACCAGTTCTGCCATCCCACCCAGGAACAGAAGACAGCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS CCA 72 bp AAACAGGCCAGGAACAGTGGCTCACTCCCAGCACTTTaGGAGGTGGAGGCAGCCCAATTGCTTGAGCTCAAG +
Preference number: 6 (lower is better)
Translates to: KQARNSGSLPAL*EVEAAQLLELK
Trigger: CTTGAGCTCAAGCAATTGGGCTGCCTCCACCTCCCAAAGTGCTGGGAGTGAGCCACTGTTCCTGGCCTGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS CCA 72 bp ATGGCAGAACTGGTTGAGCCAGTTAACGGGTCTGGGTaGTGTCAGCTGATCCATCTAGTGCAGGGTCTGCAA +
Preference number: 6 (lower is better)
Translates to: MAELVEPVNGSG*CQLIHLVQGLQ
Trigger: TTGCAGACCCTGCACTAGATGGATCAGCTGACACCACCCAGACCCGTTAACTGGCTCAACCAGTTCTGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS GCA 72 bp GATGAGGTAGGAGGGAATGAGCTGGACTTACTGGATTaGATTGGGCAGAAGGGTCCTGCAATCTTGTGCTAC +
Preference number: 6 (lower is better)
Translates to: DEVGGNELDLLD*IGQKGPAILCY
Trigger: GTAGCACAAGATTGCAGGACCCTTCTGCCCAATGCAATCCAGTAAGTCCAGCTCATTCCCTCCTACCTCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS CAA 90 bp AACAGTGGCTCACTCCCAGCACTTTGGGAGGTGGAGGCAGCCCAATaGCTTGAGCTCAAGAATTTGAGAACAGCCTGGAAAATATGGCAA +
Preference number: 6 (lower is better)
Translates to: NSGSLPALWEVEAAQ*LELKNLRTAWKIWQ
Trigger: TTGCCATATTTTCCAGGCTGTTCTCAAATTCTTGAGCTCAAGCAATTGGGCTGCCTCCACCTCCCAAAGTGCTGGGAGTGAGCCACTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS CAA 90 bp CCTTGCCCACTGCCTAGACAGAGCTCATTTATCAAGACAGGGGAATaGCAATGGAGAAAGAGTAATTCAGGCAGAGCTGGTTGTGCAGGA +
Preference number: 6 (lower is better)
Translates to: PCPLPRQSSFIKTGE*QWRKSNSGRAGCAG
Trigger: TCCTGCACAACCAGCTCTGCCTGAATTACTCTTTCTCCATTGCAATTCCCCTGTCTTGATAAATGAGCTCTGTCTAGGCAGTGGGCAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS TCA 72 bp CATTCAGTCAGCCCCATCCCACAGAAGACAAAGTACTaGGTGGCACAGCCAACAAAGGAAATGGTTTTCTGC +
Preference number: 6 (lower is better)
Translates to: HSVSPIPQKTKY*VAQPTKEMVFC
Trigger: GCAGAAAACCATTTCCTTTGTTGGCTGTGCCACTCAGTACTTTGTCTTCTGTGGGATGGGGCTGACTGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS TCA 72 bp GAAAGGGGAGCCGTACCTAAGCTGACTGAGATGGGCTaGGCCATTGTGGTCAAGAACAAACAGCAATCAATA +
Preference number: 6 (lower is better)
Translates to: ERGAVPKLTEMG*AIVVKNKQQSI
Trigger: TATTGATTGCTGTTTGTTCTTGACCACAATGGCTCAGCCCATCTCAGTCAGCTTAGGTACGGCTCCCCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS GCA 72 bp GGAGATGGAATCAAATGGGTCGAAGTGAGTTTTTCTTaGTGTCTTCTGTTCCTGGGTGGGATGGCAGAACTG +
Preference number: 6 (lower is better)
Translates to: GDGIKWVEVSFS*CLLFLGGMAEL
Trigger: CAGTTCTGCCATCCCACCCAGGAACAGAAGACAGCAAGAAAAACTCACTTCGACCCATTTGATTCCATCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS CAA 72 bp GAGGTGGAGGCAGCCCAATTGCTTGAGCTCAAGAATTaGAGAACAGCCTGGAAAATATGGCAAAACCCTGTC +
Preference number: 6 (lower is better)
Translates to: EVEAAQLLELKN*RTAWKIWQNPV
Trigger: GACAGGGTTTTGCCATATTTTCCAGGCTGTTCTCAAATTCTTGAGCTCAAGCAATTGGGCTGCCTCCACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS TCA 72 bp TTGGTTAGGCTGGAGATGGAATCAAATGGGTCGAAGTaGGTTTTTCTTGCTGTCTTCTGTTCCTGGGTGGGA +
Preference number: 6 (lower is better)
Translates to: LVRLEMESNGSK*VFLAVFCSWVG
Trigger: TCCCACCCAGGAACAGAAGACAGCAAGAAAAACTCACTTCGACCCATTTGATTCCATCTCCAGCCTAACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS TCA 72 bp AGGTGGAGGCAGCCCAATTGCTTGAGCTCAAGAATTTaGGAACAGCCTGGAAAATATGGCAAAACCCTGTCT +
Preference number: 6 (lower is better)
Translates to: RWRQPNCLSSRI*EQPGKYGKTLS
Trigger: AGACAGGGTTTTGCCATATTTTCCAGGCTGTTCTCAAATTCTTGAGCTCAAGCAATTGGGCTGCCTCCACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS CAA 72 bp CCCAAATGGGAAAGGAGAGGGTTGAATCAGATGAGTTaGAAGTGTCCCTTTGGATTTGGGTTCCCTATGGCT +
Preference number: 6 (lower is better)
Translates to: PKWERRGLNQMS*KCPFGFGFPMA
Trigger: AGCCATAGGGAACCCAAATCCAAAGGGACACTTCAAACTCATCTGATTCAACCCTCTCCTTTCCCATTTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641361.1
ENST00000641673.1
CDS CAA 72 bp TGGAGATGGAATCAAATGGGTCGAAGTGAGTTTTTCTaGCTGTCTTCTGTTCCTGGGTGGGATGGCAGAACT +
Preference number: 6 (lower is better)
Translates to: WRWNQMGRSEFF*LSSVPGWDGRT
Trigger: AGTTCTGCCATCCCACCCAGGAACAGAAGACAGCAAGAAAAACTCACTTCGACCCATTTGATTCCATCTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS CCA 72 bp AAACCAGATCATCTGCATTTCCCACTGCTCCATGGCTaGTTTCTCGTTCCATCAATTTCTTATGCTTTGGCC +
Preference number: 6 (lower is better)
Translates to: KPDHLHFPLLHG*FLVPSISYALA
Trigger: GGCCAAAGCATAAGAAATTGATGGAACGAGAAACCAGCCATGGAGCAGTGGGAAATGCAGATGATCTGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS GCA 72 bp TTTGTTGCCATAACATCTTTTGCAAACCAGATCATCTaGATTTCCCACTGCTCCATGGCTGGTTTCTCGTTC +
Preference number: 6 (lower is better)
Translates to: FVAITSFANQII*ISHCSMAGFSF
Trigger: GAACGAGAAACCAGCCATGGAGCAGTGGGAAATGCAGATGATCTGGTTTGCAAAAGATGTTATGGCAACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS GCA 72 bp CTGGATTGCATTGGGCAGAAGGGTCCTGCAATCTTGTaGTACAAGAGAAGAAATATTGATTGCTTTGTTGCC +
Preference number: 6 (lower is better)
Translates to: LDCIGQKGPAIL*YKRRNIDCFVA
Trigger: GGCAACAAAGCAATCAATATTTCTTCTCTTGTAGCACAAGATTGCAGGACCCTTCTGCCCAATGCAATCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302040.6
ENST00000641673.1
CDS CAA 90 bp GTCATTTCTCCAGATTCTCATTTTCCCAAATGGGAAAGGAGAGGGTaGAATCAGATGAGTTTGAAGTGTCCCTTTGGATTTGGGTTCCCT +
Preference number: 6 (lower is better)
Translates to: VISPDSHFPKWERRG*NQMSLKCPFGFGFP
Trigger: AGGGAACCCAAATCCAAAGGGACACTTCAAACTCATCTGATTCAACCCTCTCCTTTCCCATTTGGGAAAATGAGAATCTGGAGAAATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641361.1
ENST00000641673.1
CDS GCA 72 bp ACATCTTTTGCAAACCAGATCATCTGCATTTCCCACTaGTCCATGGCTGGTTTCTCGTTCCATCAATTTCTT +
Preference number: 6 (lower is better)
Translates to: TSFANQIICISH*SMAGFSFHQFL
Trigger: AAGAAATTGATGGAACGAGAAACCAGCCATGGAGCAGTGGGAAATGCAGATGATCTGGTTTGCAAAAGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS GCA 72 bp TTGGATTGCATTGGGCAGAAGGGTCCTGCAATCTTGTaGTACAAGAGAAGAAATATTGATTGCTTTGTTGCC +
Preference number: 6 (lower is better)
Translates to: LDCIGQKGPAIL*YKRRNIDCFVA
Trigger: GGCAACAAAGCAATCAATATTTCTTCTCTTGTAGCACAAGATTGCAGGACCCTTCTGCCCAATGCAATCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641361.1
CDS GCA 72 bp CAGAATGTAAGTTACTCAAAGACAGGCAGGGAGTTTTaGCCATTCTGTTTCCTGATCTATCCTTGTAACCAC +
Preference number: 6 (lower is better)
Translates to: QNVSYSKTGREF*PFCFLIYPCNH
Trigger: GTGGTTACAAGGATAGATCAGGAAACAGAATGGGCAAAACTCCCTGCCTGTCTTTGAGTAACTTACATTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS CCA 72 bp TTGCAAACCAGATCATCTGCATTTCCCACTGCTCCATaGCTGGTTTCTCGTTCCATCAATTTCTTATGCTTT +
Preference number: 6 (lower is better)
Translates to: LQTRSSAFPTAP*LVSRSINFLCF
Trigger: AAAGCATAAGAAATTGATGGAACGAGAAACCAGCCATGGAGCAGTGGGAAATGCAGATGATCTGGTTTGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS CCA 72 bp AGAGTAATTCAGGCAGAGCTGGTTGTGCAGGAGGACTaGAGTTTTATTATTACTCAAATTAGTCTCCCTGAG +
Preference number: 6 (lower is better)
Translates to: RVIQAELVVQED*SFIITQISLPE
Trigger: CTCAGGGAGACTAATTTGAGTAATAATAAAACTCCAGTCCTCCTGCACAACCAGCTCTGCCTGAATTACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS TCA 72 bp ATACATATCTGGCAGTTAAGAAAGACAGACTGGCACTaGTGTAAGATCAAAATGAGGAAACAGGCCAGGAAC +
Preference number: 6 (lower is better)
Translates to: IHIWQLRKTDWH*CKIKMRKQARN
Trigger: GTTCCTGGCCTGTTTCCTCATTTTGATCTTACATCAGTGCCAGTCTGTCTTTCTTAACTGCCAGATATGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS TCA 72 bp GGAAATACAAATGCGTATAAAGAGGCAGAAATGCCCTaGGAAAGACTCAGTGGTGAAATTAAGGTTGCTGTA +
Preference number: 6 (lower is better)
Translates to: GNTNAYKEAEMP*ERLSGEIKVAV
Trigger: TACAGCAACCTTAATTTCACCACTGAGTCTTTCTCAGGGCATTTCTGCCTCTTTATACGCATTTGTATTTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS CCA 72 bp ATGCTTTGGCCTCATGTAAATAGTAAACCATGCTTCTaGAATCTCCGCTCCTTTGTTAACAAGTCTTCCAAA +
Preference number: 6 (lower is better)
Translates to: MLWPHVNSKPCF*NLRSFVNKSSK
Trigger: TTTGGAAGACTTGTTAACAAAGGAGCGGAGATTCCAGAAGCATGGTTTACTATTTACATGAGGCCAAAGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS CAA 72 bp AGAAGCCTGAGTTTTGTCTTCAGCTCCATTCATAACTaGCTGAGGACTTTGGAAAAGTCATTTCTCCAGATT +
Preference number: 6 (lower is better)
Translates to: RSLSFVFSSIHN*LRTLEKSFLQI
Trigger: AATCTGGAGAAATGACTTTTCCAAAGTCCTCAGCAAGTTATGAATGGAGCTGAAGACAAAACTCAGGCTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641361.1
ENST00000641673.1
CDS TCA 72 bp CAATATTTAAAGACAGTGATAAGCAAGGGACAACTTTaGTGTCATCAGGCCAGAACAGACGATGACTATGAA +
Preference number: 6 (lower is better)
Translates to: QYLKTVISKGQL*CHQARTDDDYE
Trigger: TTCATAGTCATCGTCTGTTCTGGCCTGATGACATCAAAGTTGTCCCTTGCTTATCACTGTCTTTAAATATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS GCA 72 bp TTTCTTATGCTTTGGCCTCATGTAAATAGTAAACCATaGTTCTGGAATCTCCGCTCCTTTGTTAACAAGTCT +
Preference number: 6 (lower is better)
Translates to: FLMLWPHVNSKP*FWNLRSFVNKS
Trigger: AGACTTGTTAACAAAGGAGCGGAGATTCCAGAAGCATGGTTTACTATTTACATGAGGCCAAAGCATAAGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302040.6
ENST00000641361.1
ENST00000641673.1
CDS CCA 72 bp TTCCACCACTTATCCTCAGAGTTTACCAGAAGGGTTTaGCCTATGACTTACTATATTTGGTGTGTTACTATT +
Preference number: 6 (lower is better)
Translates to: FHHLSSEFTRRV*PMTYYIWCVTI
Trigger: AATAGTAACACACCAAATATAGTAAGTCATAGGCCAAACCCTTCTGGTAAACTCTGAGGATAAGTGGTGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS CAA 72 bp TTTCCACCACTTATCCTCAGAGTTTACCAGAAGGGTTaGGCCTATGACTTACTATATTTGGTGTGTTACTAT +
Preference number: 6 (lower is better)
Translates to: FPPLILRVYQKG*AYDLLYLVCYY
Trigger: ATAGTAACACACCAAATATAGTAAGTCATAGGCCAAACCCTTCTGGTAAACTCTGAGGATAAGTGGTGGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS TCA 72 bp CTGCTATTAATTTTGTTTCAGAGTCAAACCATGAACTaGATTCCTTCCCAAAGTTACTTCAGCTTATGCCCA +
Preference number: 6 (lower is better)
Translates to: LLLILFQSQTMN*IPSQSYFSLCP
Trigger: TGGGCATAAGCTGAAGTAACTTTGGGAAGGAATTCAGTTCATGGTTTGACTCTGAAACAAAATTAATAGCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS CAA 72 bp CACTGGTCAAGCAGTCAAAACCAAGACGAGCCTAGATaGATCTTCACTAAAACATCAATCTATTTAATCCTA +
Preference number: 6 (lower is better)
Translates to: HWSSSQNQDEPR*IFTKTSIYLIL
Trigger: TAGGATTAAATAGATTGATGTTTTAGTGAAGATCAATCTAGGCTCGTCTTGGTTTTGACTGCTTGACCAGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS CAA 72 bp TTATTATTTGTATGGAATTTGTTTGCCCATGCATGTTaGCACCCAATGGTAACTGTGGTTCTGTGTCACTTA +
Preference number: 6 (lower is better)
Translates to: LLFVWNLFAHAC*HPMVTVVLCHL
Trigger: TAAGTGACACAGAACCACAGTTACCATTGGGTGCAAACATGCATGGGCAAACAAATTCCATACAAATAATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641673.1
CDS CAA 72 bp CAAAAAGGAAGTAAGAGGAATTTGGTATCTCTTATCTaGGTGAAATCTTCCCTACCAGAATGTAAGTTACTC +
Preference number: 6 (lower is better)
Translates to: QKGSKRNLVSLI*VKSSLPECKLL
Trigger: GAGTAACTTACATTCTGGTAGGGAAGATTTCACCAAGATAAGAGATACCAAATTCCTCTTACTTCCTTTTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641673.1