RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OR56A1 (Homo sapiens)

Ensembl gene IDs: ENSG00000180934

Ensembl transcript IDs: ENST00000641423.1, ENST00000641900.1, ENST00000641938.1

Found 348 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTTATCTCTCAGTCCCAAGCCTGCCGTCCATACTGTACTCTGTCATaGTGGCACTGGGAGTCAAACCCTTCTTTGCCAGCTGTCTCTCTC +
Preference number: 1 (lower is better)
Translates to: LISQSQACRPYCTLS*WHWESNPSLPAVSL
Trigger: GAGAGAGACAGCTGGCAAAGAAGGGTTTGACTCCCAGTGCCAGCATGACAGAGTACAGTATGGACGGCAGGCTTGGGACTGAGAGATAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
3UTR TCA 90 bp CTGAGCCCCTCAATATGTGAGAGCTGTGCTAGTTACTGTGAGGGGTaGTCACTGTTGTCCCACTGCTGTCTTGGTCCCTCCATCCTTTAC +
Preference number: 1 (lower is better)
Translates to: LSPSICESCASYCEG*SLLSHCCLGPSILY
Trigger: GTAAAGGATGGAGGGACCAAGACAGCAGTGGGACAACAGTGATCACCCCTCACAGTAACTAGCACAGCTCTCACATATTGAGGGGCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
3UTR GCA 90 bp AGCCTCACAATCATGGCAGAAGACAAGAAGGAGCAACTTACATCTTaGATGGGTGGTGGGAGGAAAAGAGAGGAGCTTGTGCAGGGAAAC +
Preference number: 1 (lower is better)
Translates to: SLTIMAEDKKEQLTS*MGGGRKREELVQGN
Trigger: GTTTCCCTGCACAAGCTCCTCTCTTTTCCTCCCACCACCCATGCAAGATGTAAGTTGCTCCTTCTTGTCTTCTGCCATGATTGTGAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641900.1
3UTR CCA 90 bp AAGGTTTTAGTCCCAGCTCTGAGGGCCACATCCTCTGAGGTCCTATaGCATAAGTACCAATTAGGGACAGCATCCTTCCTCAGATATCTG +
Preference number: 1 (lower is better)
Translates to: KVLVPALRATSSEVL*HKYQLGTASFLRYL
Trigger: CAGATATCTGAGGAAGGATGCTGTCCCTAATTGGTACTTATGCCATAGGACCTCAGAGGATGTGGCCCTCAGAGCTGGGACTAAAACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
3UTR TCA 90 bp ATATCAGATCTTCCTGCTCAAGAGGCTGTGTTCCTCACACAAATATaGCTAACCTGCAAACCAGGGAGTGAGGGGAGTGACCTTTGGAAA +
Preference number: 1 (lower is better)
Translates to: ISDLPAQEAVFLTQI*LTCKPGSEGSDLWK
Trigger: TTTCCAAAGGTCACTCCCCTCACTCCCTGGTTTGCAGGTTAGTCATATTTGTGTGAGGAACACAGCCTCTTGAGCAGGAAGATCTGATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
3UTR CCA 90 bp TCTGAGTTTTGGCCAAATAACATAGACTCCTCTTTGAGTTCATTCTaGGCTTGCTTCCGGGTGAAATCATGGCAGATGCAGGGAAAGCAC +
Preference number: 1 (lower is better)
Translates to: SEFWPNNIDSSLSSF*ACFRVKSWQMQGKH
Trigger: GTGCTTTCCCTGCATCTGCCATGATTTCACCCGGAAGCAAGCCCAGAATGAACTCAAAGAGGAGTCTATGTTATTTGGCCAAAACTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
3UTR TCA 90 bp CCTTCCTGTAAGCCAATGGGTATAATTTTTCTTTCCTACTGTTGTTaGGTGACTGGAAGAAACTCTCCTCCTAGAGCCCACACCAGCATT +
Preference number: 1 (lower is better)
Translates to: PSCKPMGIIFLSYCC*VTGRNSPPRAHTSI
Trigger: AATGCTGGTGTGGGCTCTAGGAGGAGAGTTTCTTCCAGTCACTCAACAACAGTAGGAAAGAAAAATTATACCCATTGGCTTACAGGAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
3UTR GCA 90 bp GTAAAGGAAGGAATCTGGTTCAGTAATGAAGGGAGCCTCAGTGCATaGAATAAACACTCACTAACTGACATTTCTCTACTTCGCTGCCTA +
Preference number: 1 (lower is better)
Translates to: VKEGIWFSNEGSLSA*NKHSLTDISLLRCL
Trigger: TAGGCAGCGAAGTAGAGAAATGTCAGTTAGTGAGTGTTTATTGCATGCACTGAGGCTCCCTTCATTACTGAACCAGATTCCTTCCTTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
3UTR CCA 90 bp CATTTTGCTATGGGAACTTCACAGCAGAGTTGGGTCTGCCCTTCATaGTCTGATTCTTTGGTTATCTTGCTCCTTTATCATCTGTATGAG +
Preference number: 1 (lower is better)
Translates to: HFAMGTSQQSWVCPS*SDSLVILLLYHLYE
Trigger: CTCATACAGATGATAAAGGAGCAAGATAACCAAAGAATCAGACCATGAAGGGCAGACCCAACTCTGCTGTGAAGTTCCCATAGCAAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
3UTR GCA 90 bp CTACTCCTGTCTCTCTTCTCATGTTCTGAATGCACCCTCTTCCAATaGAGTTGGAACATATTCAGGTTGTATCAGCAAAGCAAATCTTCA +
Preference number: 1 (lower is better)
Translates to: LLLSLFSCSECTLFQ*SWNIFRLYQQSKSS
Trigger: TGAAGATTTGCTTTGCTGATACAACCTGAATATGTTCCAACTGCATTGGAAGAGGGTGCATTCAGAACATGAGAAGAGAGACAGGAGTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
3UTR CCA 90 bp AGAAGTTTTGTCAAGCAAGACTCTGCCTTCTCTGAGAAGTCCCTTTaGTCTCAAAGAAGTAAGAATAGGCAGAAAATACCTGTCGACATC +
Preference number: 1 (lower is better)
Translates to: RSFVKQDSAFSEKSL*SQRSKNRQKIPVDI
Trigger: GATGTCGACAGGTATTTTCTGCCTATTCTTACTTCTTTGAGACCAAAGGGACTTCTCAGAGAAGGCAGAGTCTTGCTTGACAAAACTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
3UTR CCA 90 bp GCATTGATCTACAGAAGTCTGGTTCGGGAATTAAGATCTGAGTTTTaGCCAAATAACATAGACTCCTCTTTGAGTTCATTCTGGGCTTGC +
Preference number: 1 (lower is better)
Translates to: ALIYRSLVRELRSEF*PNNIDSSLSSFWAC
Trigger: GCAAGCCCAGAATGAACTCAAAGAGGAGTCTATGTTATTTGGCCAAAACTCAGATCTTAATTCCCGAACCAGACTTCTGTAGATCAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
3UTR CCA 90 bp GCAATTTACAAAAGAAATAGGTTTAATTGGACTTACAGTTCCACATaGCTGGGGAAGCCTCACAATCATGGCAGAAGACAAGAAGGAGCA +
Preference number: 1 (lower is better)
Translates to: AIYKRNRFNWTYSST*LGKPHNHGRRQEGA
Trigger: TGCTCCTTCTTGTCTTCTGCCATGATTGTGAGGCTTCCCCAGCCATGTGGAACTGTAAGTCCAATTAAACCTATTTCTTTTGTAAATTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641900.1
3UTR TCA 90 bp TTTGGGCAGTGTAGTGATTTTAATGGTACTGATTCTTCCTATCCATaGGCACGGGATGTCTGTCCATTAGTTTGTATCTCCTCTGATTTC +
Preference number: 1 (lower is better)
Translates to: FGQCSDFNGTDSSYP*ARDVCPLVCISSDF
Trigger: GAAATCAGAGGAGATACAAACTAATGGACAGACATCCCGTGCTCATGGATAGGAAGAATCAGTACCATTAAAATCACTACACTGCCCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641900.1
3UTR GCA 90 bp AGCAGAGTTGGGTCTGCCCTTCATGGTCTGATTCTTTGGTTATCTTaGTCCTTTATCATCTGTATGAGGATTTACTTCAAAGCCTATCTA +
Preference number: 1 (lower is better)
Translates to: SRVGSALHGLILWLS*SFIICMRIYFKAYL
Trigger: TAGATAGGCTTTGAAGTAAATCCTCATACAGATGATAAAGGAGCAAGATAACCAAAGAATCAGACCATGAAGGGCAGACCCAACTCTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
3UTR CCA 90 bp CCTCTATACTTAGAACCAGAGCAGAGAGCCAACTTTTCAAGTATGTaGTTTATCCATTTGTTACGTTTAGGACTCTACTACTGGGGAACT +
Preference number: 1 (lower is better)
Translates to: PLYLEPEQRANFSSM*FIHLLRLGLYYWGT
Trigger: AGTTCCCCAGTAGTAGAGTCCTAAACGTAACAAATGGATAAACCACATACTTGAAAAGTTGGCTCTCTGCTCTGGTTCTAAGTATAGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
3UTR CCA 90 bp TATTTTACCACTTGCAGTGAGCTTGACAATTTTGTGAGAAATCTGTaGTCCTCTAAACCTCTATACTTAGAACCAGAGCAGAGAGCCAAC +
Preference number: 1 (lower is better)
Translates to: YFTTCSELDNFVRNL*SSKPLYLEPEQRAN
Trigger: GTTGGCTCTCTGCTCTGGTTCTAAGTATAGAGGTTTAGAGGACCACAGATTTCTCACAAAATTGTCAAGCTCACTGCAAGTGGTAAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
3UTR CCA 90 bp AGTCTGGCCGATGAAATGATAGAGAAAGTGATGTGTCTCCTAGTTTaGGGCCCTAAAGCTTACAAAATCCTGCATATTCTTTCTCTTTCT +
Preference number: 1 (lower is better)
Translates to: SLADEMIEKVMCLLV*GPKAYKILHILSLS
Trigger: AGAAAGAGAAAGAATATGCAGGATTTTGTAAGCTTTAGGGCCCCAAACTAGGAGACACATCACTTTCTCTATCATTTCATCGGCCAGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
3UTR TCA 90 bp CCCTACAACAAAGTTGGTAGTTTCTATCCCTATGTACACCCAGTTTaGGTCAAGCATCTCATAATTGTGTTGGCCATTTGCATTGATCTA +
Preference number: 1 (lower is better)
Translates to: PYNKVGSFYPYVHPV*VKHLIIVLAICIDL
Trigger: TAGATCAATGCAAATGGCCAACACAATTATGAGATGCTTGACTCAAACTGGGTGTACATAGGGATAGAAACTACCAACTTTGTTGTAGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
3UTR TCA 90 bp CTATTCTTTCTTTCCACTGGCCTTGATTTAAGTCAGCTATGGTATTaGATAGCAATGTGCAATGATATCAGATCTTCCTGCTCAAGAGGC +
Preference number: 1 (lower is better)
Translates to: LFFLSTGLDLSQLWY*IAMCNDIRSSCSRG
Trigger: GCCTCTTGAGCAGGAAGATCTGATATCATTGCACATTGCTATTCAATACCATAGCTGACTTAAATCAAGGCCAGTGGAAAGAAAGAATAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
3UTR GCA 90 bp AGTGCATGCAATAAACACTCACTAACTGACATTTCTCTACTTCGCTaGCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAA +
Preference number: 1 (lower is better)
Translates to: SACNKHSLTDISLLR*LGKITEEEEQEVLE
Trigger: TTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCAGCGAAGTAGAGAAATGTCAGTTAGTGAGTGTTTATTGCATGCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
3UTR GCA 90 bp GGTATGTCTCTTTTATTTGTTAAATTAATCACTCAAGTCCCTATGTaGCCTATGAGCAGGAAGTACAGGAGTTTTCTAAACGGACTTGTC +
Preference number: 1 (lower is better)
Translates to: GMSLLFVKLITQVPM*PMSRKYRSFLNGLV
Trigger: GACAAGTCCGTTTAGAAAACTCCTGTACTTCCTGCTCATAGGGCACATAGGGACTTGAGTGATTAATTTAACAAATAAAAGAGACATACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
3UTR GCA 90 bp AATGCCTGCAGAGATGTGTTGAAGATTAAATTACTTAAATGTAACTaGCAAGGTTCAAAGCAGCCACTCAATAAATACGAGTTTCTTCCC +
Preference number: 1 (lower is better)
Translates to: NACRDVLKIKLLKCN*QGSKQPLNKYEFLP
Trigger: GGGAAGAAACTCGTATTTATTGAGTGGCTGCTTTGAACCTTGGCAGTTACATTTAAGTAATTTAATCTTCAACACATCTCTGCAGGCATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
3UTR CAA 90 bp AAGCCTCACAATCATGGCAGAAGACAAGAAGGAGCAACTTACATCTaGCATGGGTGGTGGGAGGAAAAGAGAGGAGCTTGTGCAGGGAAA +
Preference number: 2 (lower is better)
Translates to: KPHNHGRRQEGATYI*HGWWEEKRGACAGK
Trigger: TTTCCCTGCACAAGCTCCTCTCTTTTCCTCCCACCACCCATGCAAGATGTAAGTTGCTCCTTCTTGTCTTCTGCCATGATTGTGAGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641900.1
3UTR-3UTR TCA 90 bp TGTTGTCCCACTGCTGTCTTGGTCCCTCCATCCTTTACAAATCCCTACAACAAACAGTGCACTGCAGGGTaGTGTTATAGGTGCTCCTCA +
Preference number: 2 (lower is better)
Translates to: CCPTAVLVPPSFTNPYNKQCTAG*CYRCSS
Trigger: TGAGGAGCACCTATAACATCACCCTGCAGTGCACTG...TTTGTTGTAGGGATTTGTAAAGGATGGAGGGACCAAGACAGCAGTGGGACAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
3UTR CAA 90 bp TATAGGTGCTCCTCAGTAGTCACAAGCTTTCAGACCCACATAAGATaGGAGCTGCGCCAGTTACTAACACTTATCTCTCAGTCCCAAGCC +
Preference number: 2 (lower is better)
Translates to: YRCSSVVTSFQTHIR*ELRQLLTLISQSQA
Trigger: GGCTTGGGACTGAGAGATAAGTGTTAGTAACTGGCGCAGCTCCAATCTTATGTGGGTCTGAAAGCTTGTGACTACTGAGGAGCACCTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
3UTR CAA 90 bp GTGCTAGTTACTGTGAGGGGTGATCACTGTTGTCCCACTGCTGTCTaGGTCCCTCCATCCTTTACAAATCCCTACAACAAAGTTGGTAGT +
Preference number: 2 (lower is better)
Translates to: VLVTVRGDHCCPTAV*VPPSFTNPYNKVGS
Trigger: ACTACCAACTTTGTTGTAGGGATTTGTAAAGGATGGAGGGACCAAGACAGCAGTGGGACAACAGTGATCACCCCTCACAGTAACTAGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
3UTR-3UTR TCA 90 bp TGTTGTCCCACTGCTGTCTTGGTCCCTCCATCCTTTACAAATCCCTACAACAAACCAGCTGTCTCTCTCTaGGTTTCTACCTACAGAGAG +
Preference number: 2 (lower is better)
Translates to: CCPTAVLVPPSFTNPYNKPAVSL*VSTYRE
Trigger: CTCTCTGTAGGTAGAAACTCAGAGAGAGACAGCTGG...TTTGTTGTAGGGATTTGTAAAGGATGGAGGGACCAAGACAGCAGTGGGACAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
3UTR-3UTR GCA 90 bp TGTTGTCCCACTGCTGTCTTGGTCCCTCCATCCTTTACAAATCCCTACAACAAAGTTTCTCCACCCACCTaGACTAGGGGACTTGATTCT +
Preference number: 2 (lower is better)
Translates to: CCPTAVLVPPSFTNPYNKVSPPT*TRGLDS
Trigger: AGAATCAAGTCCCCTAGTGCAGGTGGGTGGAGAAAC...TTTGTTGTAGGGATTTGTAAAGGATGGAGGGACCAAGACAGCAGTGGGACAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
3UTR-3UTR TCA 90 bp TGTTGTCCCACTGCTGTCTTGGTCCCTCCATCCTTTACAAATCCCTACAACAAACCTACTGTTGTTGAGTaGCTGGAAGAAACTCTCCTC +
Preference number: 2 (lower is better)
Translates to: CCPTAVLVPPSFTNPYNKPTVVE*LEETLL
Trigger: GAGGAGAGTTTCTTCCAGTCACTCAACAACAGTAGG...TTTGTTGTAGGGATTTGTAAAGGATGGAGGGACCAAGACAGCAGTGGGACAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
3UTR-3UTR CCA 90 bp TGTTATAGGTGCTCCTCAGTAGTCACAAGCTTTCAGACCCACATAAGATTGGAGTGTACTCTGTCATGCTaGCACTGGGAGTCAAACCCT +
Preference number: 2 (lower is better)
Translates to: CYRCSSVVTSFQTHIRLECTLSC*HWESNP
Trigger: AGGGTTTGACTCCCAGTGCCAGCATGACAGAGTACA...CTCCAATCTTATGTGGGTCTGAAAGCTTGTGACTACTGAGGAGCACCTATAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
3UTR CAA 90 bp CGGGAATTAAGATCTGAGTTTTGGCCAAATAACATAGACTCCTCTTaGAGTTCATTCTGGGCTTGCTTCCGGGTGAAATCATGGCAGATG +
Preference number: 2 (lower is better)
Translates to: RELRSEFWPNNIDSS*SSFWACFRVKSWQM
Trigger: CATCTGCCATGATTTCACCCGGAAGCAAGCCCAGAATGAACTCAAAGAGGAGTCTATGTTATTTGGCCAAAACTCAGATCTTAATTCCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
3UTR CAA 90 bp CTGCTGTCTTGGTCCCTCCATCCTTTACAAATCCCTACAACAAAGTaGGTAGTTTCTATCCCTATGTACACCCAGTTTGAGTCAAGCATC +
Preference number: 2 (lower is better)
Translates to: LLSWSLHPLQIPTTK*VVSIPMYTQFESSI
Trigger: GATGCTTGACTCAAACTGGGTGTACATAGGGATAGAAACTACCAACTTTGTTGTAGGGATTTGTAAAGGATGGAGGGACCAAGACAGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
3UTR CAA 90 bp AGACAGTGCTTGAAAACCTTTACAGAGAGGACATGTTTTAACATTTaGCTATGGGAACTTCACAGCAGAGTTGGGTCTGCCCTTCATGGT +
Preference number: 2 (lower is better)
Translates to: RQCLKTFTERTCFNI*LWELHSRVGSALHG
Trigger: ACCATGAAGGGCAGACCCAACTCTGCTGTGAAGTTCCCATAGCAAAATGTTAAAACATGTCCTCTCTGTAAAGGTTTTCAAGCACTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
3UTR-3UTR TCA 90 bp AGTACCGTTATTCCCACAAATAGCCACAAAGGGGCAATGTTGACTTGCCAACTAAGCAAAGGCTGGTCTTaGGCTTCAATTGCAATTGAT +
Preference number: 2 (lower is better)
Translates to: STVIPTNSHKGAMLTCQLSKGWS*ASIAID
Trigger: ATCAATTGCAATTGAAGCTCAAGACCAGCCTTTGCT...TAGTTGGCAAGTCAACATTGCCCCTTTGTGGCTATTTGTGGGAATAACGGTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
3UTR-3UTR TCA 90 bp CCAAGCCTGAAGGTACTAAGAGCCCCTTCCTGTAAGCCAATGGGTATAATTTTTAGCAAAGGCTGGTCTTaGGCTTCAATTGCAATTGAT +
Preference number: 2 (lower is better)
Translates to: PSLKVLRAPSCKPMGIIFSKGWS*ASIAID
Trigger: ATCAATTGCAATTGAAGCTCAAGACCAGCCTTTGCT...AAAAATTATACCCATTGGCTTACAGGAAGGGGCTCTTAGTACCTTCAGGCTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
3UTR-3UTR TCA 90 bp CCAAGCCTGAAGGTACTAAGAGCCCCTTCCTGTAAGCCAATGGGTATAATTTTTGAAACATTAGAAGGTTaGAACATGGAGAGGGACACT +
Preference number: 2 (lower is better)
Translates to: PSLKVLRAPSCKPMGIIFETLEG*NMERDT
Trigger: AGTGTCCCTCTCCATGTTTCAACCTTCTAATGTTTC...AAAAATTATACCCATTGGCTTACAGGAAGGGGCTCTTAGTACCTTCAGGCTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
3UTR-3UTR CCA 90 bp AGTACCGTTATTCCCACAAATAGCCACAAAGGGGCAATGTTGACTTGCCAACTAAGCCCACACCAGCATTaGGTTACAGTTACTTTATCT +
Preference number: 2 (lower is better)
Translates to: STVIPTNSHKGAMLTCQLSPHQH*VTVTLS
Trigger: AGATAAAGTAACTGTAACCCAATGCTGGTGTGGGCT...TAGTTGGCAAGTCAACATTGCCCCTTTGTGGCTATTTGTGGGAATAACGGTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
3UTR CAA 90 bp CAGCAGAGTTGGGTCTGCCCTTCATGGTCTGATTCTTTGGTTATCTaGCTCCTTTATCATCTGTATGAGGATTTACTTCAAAGCCTATCT +
Preference number: 2 (lower is better)
Translates to: QQSWVCPSWSDSLVI*LLYHLYEDLLQSLS
Trigger: AGATAGGCTTTGAAGTAAATCCTCATACAGATGATAAAGGAGCAAGATAACCAAAGAATCAGACCATGAAGGGCAGACCCAACTCTGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
3UTR-3UTR GCA 90 bp TGTTGTCCCACTGCTGTCTTGGTCCCTCCATCCTTTACAAATCCCTACAACAAAGAAAGTAACAATGCCTaGAGAGATGTGTTGAAGATT +
Preference number: 2 (lower is better)
Translates to: CCPTAVLVPPSFTNPYNKESNNA*RDVLKI
Trigger: AATCTTCAACACATCTCTGCAGGCATTGTTACTTTC...TTTGTTGTAGGGATTTGTAAAGGATGGAGGGACCAAGACAGCAGTGGGACAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
3UTR CAA 90 bp ATTCAATTCGTCAGTCACTCTGTGAATTCAAGTAAAAATGAGACCTaGATCCCTCTCTTGGCTCTATCCACAGGCAAACCAGCATTTACT +
Preference number: 2 (lower is better)
Translates to: IQFVSHSVNSSKNET*IPLLALSTGKPAFT
Trigger: AGTAAATGCTGGTTTGCCTGTGGATAGAGCCAAGAGAGGGATCAAGGTCTCATTTTTACTTGAATTCACAGAGTGACTGACGAATTGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641900.1
3UTR-3UTR GCA 90 bp CCAAGCCTGAAGGTACTAAGAGCCCCTTCCTGTAAGCCAATGGGTATAATTTTTGAAAGTAACAATGCCTaGAGAGATGTGTTGAAGATT +
Preference number: 2 (lower is better)
Translates to: PSLKVLRAPSCKPMGIIFESNNA*RDVLKI
Trigger: AATCTTCAACACATCTCTGCAGGCATTGTTACTTTC...AAAAATTATACCCATTGGCTTACAGGAAGGGGCTCTTAGTACCTTCAGGCTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
3UTR-3UTR GCA 90 bp TGTTGTCCCACTGCTGTCTTGGTCCCTCCATCCTTTACAAATCCCTACAACAAATTGGTATATTGCAAGTaGTCAAAACACATGAACTTG +
Preference number: 2 (lower is better)
Translates to: CCPTAVLVPPSFTNPYNKLVYCK*SKHMNL
Trigger: CAAGTTCATGTGTTTTGAGCACTTGCAATATACCAA...TTTGTTGTAGGGATTTGTAAAGGATGGAGGGACCAAGACAGCAGTGGGACAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
3UTR-3UTR CCA 90 bp AGTACCGTTATTCCCACAAATAGCCACAAAGGGGCAATGTTGACTTGCCAACTATCCAGATTGGTTGGTTaGTTGATTGGTTTTGGTTTT +
Preference number: 2 (lower is better)
Translates to: STVIPTNSHKGAMLTCQLSRLVG*LIGFGF
Trigger: AAAACCAAAACCAATCAACCAACCAACCAATCTGGA...TAGTTGGCAAGTCAACATTGCCCCTTTGTGGCTATTTGTGGGAATAACGGTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
3UTR-3UTR GCA 90 bp AGTACCGTTATTCCCACAAATAGCCACAAAGGGGCAATGTTGACTTGCCAACTAATGGAGTTGACCAAATaGTTGAAAATATCACCTGAT +
Preference number: 2 (lower is better)
Translates to: STVIPTNSHKGAMLTCQLMELTK*LKISPD
Trigger: ATCAGGTGATATTTTCAAGCATTTGGTCAACTCCAT...TAGTTGGCAAGTCAACATTGCCCCTTTGTGGCTATTTGTGGGAATAACGGTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
3UTR-3UTR GCA 90 bp ATGACATATCTTTCCACATTCAACTACAGCACTTGGGCAGTCAACAGATCAAGTATTTCTCTACTTCGCTaGCTAGGTAAAATCACTGAA +
Preference number: 2 (lower is better)
Translates to: MTYLSTFNYSTWAVNRSSISLLR*LGKITE
Trigger: TTCAGTGATTTTACCTAGGCAGCGAAGTAGAGAAAT...ACTTGATCTGTTGACTGCCCAAGTGCTGTAGTTGAATGTGGAAAGATATGTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
3UTR CCA 72 bp GTCCCAGCTCTGAGGGCCACATCCTCTGAGGTCCTATaGCATAAGTACCAATTAGGGACAGCATCCTTCCTC +
Preference number: 3 (lower is better)
Translates to: VPALRATSSEVL*HKYQLGTASFL
Trigger: GAGGAAGGATGCTGTCCCTAATTGGTACTTATGCCATAGGACCTCAGAGGATGTGGCCCTCAGAGCTGGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
3UTR TCA 72 bp CTTCCTGCTCAAGAGGCTGTGTTCCTCACACAAATATaGCTAACCTGCAAACCAGGGAGTGAGGGGAGTGAC +
Preference number: 3 (lower is better)
Translates to: LPAQEAVFLTQI*LTCKPGSEGSD
Trigger: GTCACTCCCCTCACTCCCTGGTTTGCAGGTTAGTCATATTTGTGTGAGGAACACAGCCTCTTGAGCAGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
3UTR GCA 72 bp CTCTGTCATGCTGGCACTGGGAGTCAAACCCTTCTTTaGCAGCTGTCTCTCTCTGAGTTTCTACCTACAGAG +
Preference number: 3 (lower is better)
Translates to: LCHAGTGSQTLL*QLSLSEFLPTE
Trigger: CTCTGTAGGTAGAAACTCAGAGAGAGACAGCTGGCAAAGAAGGGTTTGACTCCCAGTGCCAGCATGACAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
3UTR CCA 72 bp AGACAAGAAGGAGCAACTTACATCTTGCATGGGTGGTaGGAGGAAAAGAGAGGAGCTTGTGCAGGGAAACTC +
Preference number: 3 (lower is better)
Translates to: RQEGATYILHGW*EEKRGACAGKL
Trigger: GAGTTTCCCTGCACAAGCTCCTCTCTTTTCCTCCCACCACCCATGCAAGATGTAAGTTGCTCCTTCTTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641900.1
3UTR CCA 72 bp AGAAGACAAGAAGGAGCAACTTACATCTTGCATGGGTaGTGGGAGGAAAAGAGAGGAGCTTGTGCAGGGAAA +
Preference number: 3 (lower is better)
Translates to: RRQEGATYILHG*WEEKRGACAGK
Trigger: TTTCCCTGCACAAGCTCCTCTCTTTTCCTCCCACCACCCATGCAAGATGTAAGTTGCTCCTTCTTGTCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641900.1
3UTR-3UTR CAA 90 bp TGTTGTCCCACTGCTGTCTTGGTCCCTCCATCCTTTACAAATCCCTACAACAAAGAGCCCACACCAGCATaGGGTTACAGTTACTTTATC +
Preference number: 3 (lower is better)
Translates to: CCPTAVLVPPSFTNPYNKEPTPA*GYSYFI
Trigger: GATAAAGTAACTGTAACCCAATGCTGGTGTGGGCTC...TTTGTTGTAGGGATTTGTAAAGGATGGAGGGACCAAGACAGCAGTGGGACAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
3UTR CCA 72 bp TTACAGTTCCACATGGCTGGGGAAGCCTCACAATCATaGCAGAAGACAAGAAGGAGCAACTTACATCTTGCA +
Preference number: 3 (lower is better)
Translates to: LQFHMAGEASQS*QKTRRSNLHLA
Trigger: TGCAAGATGTAAGTTGCTCCTTCTTGTCTTCTGCCATGATTGTGAGGCTTCCCCAGCCATGTGGAACTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641900.1
3UTR-3UTR CAA 90 bp CCAAGCCTGAAGGTACTAAGAGCCCCTTCCTGTAAGCCAATGGGTATAATTTTTCTGTCTGTTCCTGTCTaGTCAGTATTCCTTAGCAGC +
Preference number: 3 (lower is better)
Translates to: PSLKVLRAPSCKPMGIIFLSVPV*SVFLSS
Trigger: GCTGCTAAGGAATACTGACAAGACAGGAACAGACAG...AAAAATTATACCCATTGGCTTACAGGAAGGGGCTCTTAGTACCTTCAGGCTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
3UTR-3UTR CAA 90 bp TGTTGTCCCACTGCTGTCTTGGTCCCTCCATCCTTTACAAATCCCTACAACAAAAACATAGACTCCTCTTaGAGTTCATTCTGGGCTTGC +
Preference number: 3 (lower is better)
Translates to: CCPTAVLVPPSFTNPYNKNIDSS*SSFWAC
Trigger: GCAAGCCCAGAATGAACTCAAAGAGGAGTCTATGTT...TTTGTTGTAGGGATTTGTAAAGGATGGAGGGACCAAGACAGCAGTGGGACAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
3UTR TCA 72 bp GGAGCAAAGCCCTCATGCATTGGAATGAGGTGTGGGTaGGAAGTAAATTTTATTGTGTTAGGCCACTGTGCT +
Preference number: 3 (lower is better)
Translates to: GAKPSCIGMRCG*EVNFIVLGHCA
Trigger: AGCACAGTGGCCTAACACAATAAAATTTACTTCTCACCCACACCTCATTCCAATGCATGAGGGCTTTGCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
3UTR TCA 72 bp TGCAAGCAGCTGGATCTATGTGAGGAGTCTGGCCGATaGAATGATAGAGAAAGTGATGTGTCTCCTAGTTTG +
Preference number: 3 (lower is better)
Translates to: CKQLDLCEESGR*NDRESDVSPSL
Trigger: CAAACTAGGAGACACATCACTTTCTCTATCATTTCATCGGCCAGACTCCTCACATAGATCCAGCTGCTTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
3UTR TCA 72 bp TCTCCTCCCCCACCACATACTAACAACGGCATCTCTTaGCAGACCACAAGAATTCTGCATAAACTCAAAAGC +
Preference number: 3 (lower is better)
Translates to: SPPPPHTNNGIS*QTTRILHKLKS
Trigger: GCTTTTGAGTTTATGCAGAATTCTTGTGGTCTGTCAAGAGATGCCGTTGTTAGTATGTGGTGGGGGAGGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641900.1
3UTR-3UTR CAA 90 bp TGTTGTCCCACTGCTGTCTTGGTCCCTCCATCCTTTACAAATCCCTACAACAAAGGTCTTGAGCTTCAATaGCAATTGATGAGGCATTTC +
Preference number: 3 (lower is better)
Translates to: CCPTAVLVPPSFTNPYNKGLELQ*QLMRHF
Trigger: GAAATGCCTCATCAATTGCAATTGAAGCTCAAGACC...TTTGTTGTAGGGATTTGTAAAGGATGGAGGGACCAAGACAGCAGTGGGACAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
3UTR CCA 72 bp ATGGGAACTTCACAGCAGAGTTGGGTCTGCCCTTCATaGTCTGATTCTTTGGTTATCTTGCTCCTTTATCAT +
Preference number: 3 (lower is better)
Translates to: MGTSQQSWVCPS*SDSLVILLLYH
Trigger: ATGATAAAGGAGCAAGATAACCAAAGAATCAGACCATGAAGGGCAGACCCAACTCTGCTGTGAAGTTCCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
3UTR CCA 72 bp ATGTGGAGCAAAGCCCTCATGCATTGGAATGAGGTGTaGGTGAGAAGTAAATTTTATTGTGTTAGGCCACTG +
Preference number: 3 (lower is better)
Translates to: MWSKALMHWNEV*VRSKFYCVRPL
Trigger: CAGTGGCCTAACACAATAAAATTTACTTCTCACCCACACCTCATTCCAATGCATGAGGGCTTTGCTCCACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
3UTR CCA 72 bp GAAATAGGTTTAATTGGACTTACAGTTCCACATGGCTaGGGAAGCCTCACAATCATGGCAGAAGACAAGAAG +
Preference number: 3 (lower is better)
Translates to: EIGLIGLTVPHG*GSLTIMAEDKK
Trigger: CTTCTTGTCTTCTGCCATGATTGTGAGGCTTCCCCAGCCATGTGGAACTGTAAGTCCAATTAAACCTATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641900.1
3UTR-3UTR CAA 90 bp TGTTGTCCCACTGCTGTCTTGGTCCCTCCATCCTTTACAAATCCCTACAACAAAAAAGTTCTTTTCTTCTaGCCCAGCAGAAGTTTTGTC +
Preference number: 3 (lower is better)
Translates to: CCPTAVLVPPSFTNPYNKKVLFF*PSRSFV
Trigger: GACAAAACTTCTGCTGGGCAAGAAGAAAAGAACTTT...TTTGTTGTAGGGATTTGTAAAGGATGGAGGGACCAAGACAGCAGTGGGACAACA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
3UTR-3UTR CAA 90 bp CCAAGCCTGAAGGTACTAAGAGCCCCTTCCTGTAAGCCAATGGGTATAATTTTTAGAAACATTAGAAGGTaGAAACATGGAGAGGGACAC +
Preference number: 3 (lower is better)
Translates to: PSLKVLRAPSCKPMGIIFRNIRR*KHGEGH
Trigger: GTGTCCCTCTCCATGTTTCAACCTTCTAATGTTTCT...AAAAATTATACCCATTGGCTTACAGGAAGGGGCTCTTAGTACCTTCAGGCTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
3UTR TCA 72 bp TTCTACCTACAGAGAGCAACAGAAACATTAGAAGGTTaGAACATGGAGAGGGACACTTGCTCTTTCTGTCTG +
Preference number: 3 (lower is better)
Translates to: FYLQRATETLEG*NMERDTCSFCL
Trigger: CAGACAGAAAGAGCAAGTGTCCCTCTCCATGTTTCAACCTTCTAATGTTTCTGTTGCTCTCTGTAGGTAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
3UTR TCA 72 bp AAGCCAATGGGTATAATTTTTCTTTCCTACTGTTGTTaGGTGACTGGAAGAAACTCTCCTCCTAGAGCCCAC +
Preference number: 3 (lower is better)
Translates to: KPMGIIFLSYCC*VTGRNSPPRAH
Trigger: GTGGGCTCTAGGAGGAGAGTTTCTTCCAGTCACTCAACAACAGTAGGAAAGAAAAATTATACCCATTGGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
3UTR GCA 72 bp TCTCTCTTCTCATGTTCTGAATGCACCCTCTTCCAATaGAGTTGGAACATATTCAGGTTGTATCAGCAAAGC +
Preference number: 3 (lower is better)
Translates to: SLFSCSECTLFQ*SWNIFRLYQQS
Trigger: GCTTTGCTGATACAACCTGAATATGTTCCAACTGCATTGGAAGAGGGTGCATTCAGAACATGAGAAGAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
3UTR CCA 72 bp CGTTTATCAGCTGGAGGAGGTTTTGGGCCTAGACTGTaGGGTTTTCTATATATAGAATCATGTCATCTGCAA +
Preference number: 3 (lower is better)
Translates to: RLSAGGGFGPRL*GFLYIESCHLQ
Trigger: TTGCAGATGACATGATTCTATATATAGAAAACCCCACAGTCTAGGCCCAAAACCTCCTCCAGCTGATAAACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641900.1
3UTR GCA 72 bp GGAATCTGGTTCAGTAATGAAGGGAGCCTCAGTGCATaGAATAAACACTCACTAACTGACATTTCTCTACTT +
Preference number: 3 (lower is better)
Translates to: GIWFSNEGSLSA*NKHSLTDISLL
Trigger: AAGTAGAGAAATGTCAGTTAGTGAGTGTTTATTGCATGCACTGAGGCTCCCTTCATTACTGAACCAGATTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
3UTR CCA 72 bp AAAAGAAATAGGTTTAATTGGACTTACAGTTCCACATaGCTGGGGAAGCCTCACAATCATGGCAGAAGACAA +
Preference number: 3 (lower is better)
Translates to: KRNRFNWTYSST*LGKPHNHGRRQ
Trigger: TTGTCTTCTGCCATGATTGTGAGGCTTCCCCAGCCATGTGGAACTGTAAGTCCAATTAAACCTATTTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641900.1
3UTR-3UTR CAA 90 bp AGTACCGTTATTCCCACAAATAGCCACAAAGGGGCAATGTTGACTTGCCAACTATCATGGTCTGATTCTTaGGTTATCTTGCTCCTTTAT +
Preference number: 3 (lower is better)
Translates to: STVIPTNSHKGAMLTCQLSWSDS*VILLLY
Trigger: ATAAAGGAGCAAGATAACCAAAGAATCAGACCATGA...TAGTTGGCAAGTCAACATTGCCCCTTTGTGGCTATTTGTGGGAATAACGGTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
3UTR TCA 72 bp AAAGTTGGTAGTTTCTATCCCTATGTACACCCAGTTTaGGTCAAGCATCTCATAATTGTGTTGGCCATTTGC +
Preference number: 3 (lower is better)
Translates to: KVGSFYPYVHPV*VKHLIIVLAIC
Trigger: GCAAATGGCCAACACAATTATGAGATGCTTGACTCAAACTGGGTGTACATAGGGATAGAAACTACCAACTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
3UTR CCA 72 bp TTCTCATGTTCTGAATGCACCCTCTTCCAATGCAGTTaGAACATATTCAGGTTGTATCAGCAAAGCAAATCT +
Preference number: 3 (lower is better)
Translates to: FSCSECTLFQCS*NIFRLYQQSKS
Trigger: AGATTTGCTTTGCTGATACAACCTGAATATGTTCCAACTGCATTGGAAGAGGGTGCATTCAGAACATGAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
3UTR CCA 72 bp ATGAAAATTTATGATCAAGGCTCTTTTGCAAGCAGCTaGATCTATGTGAGGAGTCTGGCCGATGAAATGATA +
Preference number: 3 (lower is better)
Translates to: MKIYDQGSFASS*IYVRSLADEMI
Trigger: TATCATTTCATCGGCCAGACTCCTCACATAGATCCAGCTGCTTGCAAAAGAGCCTTGATCATAAATTTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
3UTR TCA 72 bp AGTATTGTTCCCTCAACAATACTTAGGTGTTTGTTTTaGGCTTTGGCTACCAACATAGGGTCCCTTCTTTTT +
Preference number: 3 (lower is better)
Translates to: SIVPSTILRCLF*ALATNIGSLLF
Trigger: AAAAAGAAGGGACCCTATGTTGGTAGCCAAAGCTCAAAACAAACACCTAAGTATTGTTGAGGGAACAATACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
3UTR CCA 72 bp TACAGAAGTCTGGTTCGGGAATTAAGATCTGAGTTTTaGCCAAATAACATAGACTCCTCTTTGAGTTCATTC +
Preference number: 3 (lower is better)
Translates to: YRSLVRELRSEF*PNNIDSSLSSF
Trigger: GAATGAACTCAAAGAGGAGTCTATGTTATTTGGCCAAAACTCAGATCTTAATTCCCGAACCAGACTTCTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
3UTR GCA 72 bp AGAGATGTGTTGAAGATTAAATTACTTAAATGTAACTaGCAAGGTTCAAAGCAGCCACTCAATAAATACGAG +
Preference number: 3 (lower is better)
Translates to: RDVLKIKLLKCN*QGSKQPLNKYE
Trigger: CTCGTATTTATTGAGTGGCTGCTTTGAACCTTGGCAGTTACATTTAAGTAATTTAATCTTCAACACATCTCT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
3UTR GCA 72 bp ATGTTTGAGATGATGGATATGCTAATTACCCTGATCTaGTCACTACACGTTGTATGTAACTTCATAAATATG +
Preference number: 3 (lower is better)
Translates to: MFEMMDMLITLI*SLHVVCNFINM
Trigger: CATATTTATGAAGTTACATACAACGTGTAGTGAGCAGATCAGGGTAATTAGCATATCCATCATCTCAAACAT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641900.1
3UTR CAA 72 bp ACTGTGAGGGGTGATCACTGTTGTCCCACTGCTGTCTaGGTCCCTCCATCCTTTACAAATCCCTACAACAAA +
Preference number: 4 (lower is better)
Translates to: TVRGDHCCPTAV*VPPSFTNPYNK
Trigger: TTTGTTGTAGGGATTTGTAAAGGATGGAGGGACCAAGACAGCAGTGGGACAACAGTGATCACCCCTCACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR TCA 90 bp CACTCACTAACTGACATTTCTCTACTTCGCTGCCTAGGTAAAATCACTGAAGAGGGAGCTGTTGCTGGGTaGCGCCATAGGCTGAATCAT +
Preference number: 4 (lower is better)
Translates to: HSLTDISLLRCLGKITEEGAVAG*RHRLNH
Trigger: ATGATTCAGCCTATGGCGTCACCCAGCAACAGCTCC...CTCTTCAGTGATTTTACCTAGGCAGCGAAGTAGAGAAATGTCAGTTAGTGAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR TCA 90 bp CTACTTCGCTGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAGGAGCTGTTGCTGGGTaGCGCCATAGGCTGAATCAT +
Preference number: 4 (lower is better)
Translates to: LLRCLGKITEEEEQEVLEGAVAG*RHRLNH
Trigger: ATGATTCAGCCTATGGCGTCACCCAGCAACAGCTCC...TTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCAGCGAAGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641423.1
ENST00000641900.1
ENST00000641938.1
CDS-3UTR TCA 90 bp AATGAAGGGAGCCTCAGTGCATGCAATAAACACTCACTAACTGACATTTCTCTAGGGCTTGCTTCCGGGTaGAATCATGGCAGATGCAGG +
Preference number: 4 (lower is better)
Translates to: NEGSLSACNKHSLTDISLGLASG*NHGRCR
Trigger: CCTGCATCTGCCATGATTTCACCCGGAAGCAAGCCC...TAGAGAAATGTCAGTTAGTGAGTGTTTATTGCATGCACTGAGGCTCCCTTCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR TCA 90 bp AGTACCGTTATTCCCACAAATAGCCACAAAGGGGCAATGTTGACTTGCCAACTAAGTTACTGTGAGGGGTaGTCACTGTTGTCCCACTGC +
Preference number: 4 (lower is better)
Translates to: STVIPTNSHKGAMLTCQLSYCEG*SLLSHC
Trigger: GCAGTGGGACAACAGTGATCACCCCTCACAGTAACT...TAGTTGGCAAGTCAACATTGCCCCTTTGTGGCTATTTGTGGGAATAACGGTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR GCA 90 bp TGTTATAGGTGCTCCTCAGTAGTCACAAGCTTTCAGACCCACATAAGATTGGAGTCACTGTTGTCCCACTaGTGTCTTGGTCCCTCCATC +
Preference number: 4 (lower is better)
Translates to: CYRCSSVVTSFQTHIRLESLLSH*CLGPSI
Trigger: GATGGAGGGACCAAGACAGCAGTGGGACAACAGTGA...CTCCAATCTTATGTGGGTCTGAAAGCTTGTGACTACTGAGGAGCACCTATAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CCA 90 bp TGTTGTCCCACTGCTGTCTTGGTCCCTCCATCCTTTACAAATCCCTACAACAAATTCCGGGTGAAATCATaGCAGATGCAGGGAAAGCAC +
Preference number: 4 (lower is better)
Translates to: CCPTAVLVPPSFTNPYNKFRVKS*QMQGKH
Trigger: GTGCTTTCCCTGCATCTGCCATGATTTCACCCGGAA...TTTGTTGTAGGGATTTGTAAAGGATGGAGGGACCAAGACAGCAGTGGGACAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CCA 90 bp TGTTGTCCCACTGCTGTCTTGGTCCCTCCATCCTTTACAAATCCCTACAACAAAACTTCACAGCAGAGTTaGGTCTGCCCTTCATGGTCT +
Preference number: 4 (lower is better)
Translates to: CCPTAVLVPPSFTNPYNKTSQQS*VCPSWS
Trigger: AGACCATGAAGGGCAGACCCAACTCTGCTGTGAAGT...TTTGTTGTAGGGATTTGTAAAGGATGGAGGGACCAAGACAGCAGTGGGACAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR TCA 90 bp TGTTATAGGTGCTCCTCAGTAGTCACAAGCTTTCAGACCCACATAAGATTGGAGCCAGCTGTCTCTCTCTaGGTTTCTACCTACAGAGAG +
Preference number: 4 (lower is better)
Translates to: CYRCSSVVTSFQTHIRLEPAVSL*VSTYRE
Trigger: CTCTCTGTAGGTAGAAACTCAGAGAGAGACAGCTGG...CTCCAATCTTATGTGGGTCTGAAAGCTTGTGACTACTGAGGAGCACCTATAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR TCA 90 bp CTACTTCGCTGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAACAGTGCACTGCAGGGTaGTGTTATAGGTGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: LLRCLGKITEEEEQEVLEQCTAG*CYRCSS
Trigger: TGAGGAGCACCTATAACATCACCCTGCAGTGCACTG...TTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCAGCGAAGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR TCA 90 bp TCTCTACTTCGCTGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAAGTTACTGTGAGGGGTaGTCACTGTTGTCCCACTGC +
Preference number: 4 (lower is better)
Translates to: SLLRCLGKITEEEEQEVLSYCEG*SLLSHC
Trigger: GCAGTGGGACAACAGTGATCACCCCTCACAGTAACT...TAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCAGCGAAGTAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR TCA 90 bp TGTTATAGGTGCTCCTCAGTAGTCACAAGCTTTCAGACCCACATAAGATTGGAGTGGGTCCCTAAATGTTaGTGTGGAGCAAAGCCCTCA +
Preference number: 4 (lower is better)
Translates to: CYRCSSVVTSFQTHIRLEWVPKC*CGAKPS
Trigger: TGAGGGCTTTGCTCCACATCAACATTTAGGGACCCA...CTCCAATCTTATGTGGGTCTGAAAGCTTGTGACTACTGAGGAGCACCTATAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR TCA 90 bp GACATTTCTCTACTTCGCTGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGTGGGTCCCTAAATGTTaGTGTGGAGCAAAGCCCTCA +
Preference number: 4 (lower is better)
Translates to: DISLLRCLGKITEEEEQEWVPKC*CGAKPS
Trigger: TGAGGGCTTTGCTCCACATCAACATTTAGGGACCCA...CTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCAGCGAAGTAGAGAAATGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CCA 90 bp CCAAGCCTGAAGGTACTAAGAGCCCCTTCCTGTAAGCCAATGGGTATAATTTTTTGTACTCTGTCATGCTaGCACTGGGAGTCAAACCCT +
Preference number: 4 (lower is better)
Translates to: PSLKVLRAPSCKPMGIIFCTLSC*HWESNP
Trigger: AGGGTTTGACTCCCAGTGCCAGCATGACAGAGTACA...AAAAATTATACCCATTGGCTTACAGGAAGGGGCTCTTAGTACCTTCAGGCTTGG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CCA 90 bp CCAAGCCTGAAGGTACTAAGAGCCCCTTCCTGTAAGCCAATGGGTATAATTTTTATCTTGCATGGGTGGTaGGAGGAAAAGAGAGGAGCT +
Preference number: 4 (lower is better)
Translates to: PSLKVLRAPSCKPMGIIFILHGW*EEKRGA
Trigger: AGCTCCTCTCTTTTCCTCCCACCACCCATGCAAGAT...AAAAATTATACCCATTGGCTTACAGGAAGGGGCTCTTAGTACCTTCAGGCTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000641900.1
CDS-3UTR TCA 90 bp CACTCACTAACTGACATTTCTCTACTTCGCTGCCTAGGTAAAATCACTGAAGAGCCAGCTGTCTCTCTCTaGGTTTCTACCTACAGAGAG +
Preference number: 4 (lower is better)
Translates to: HSLTDISLLRCLGKITEEPAVSL*VSTYRE
Trigger: CTCTCTGTAGGTAGAAACTCAGAGAGAGACAGCTGG...CTCTTCAGTGATTTTACCTAGGCAGCGAAGTAGAGAAATGTCAGTTAGTGAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR TCA 90 bp AGTACCGTTATTCCCACAAATAGCCACAAAGGGGCAATGTTGACTTGCCAACTACCTACTGTTGTTGAGTaGCTGGAAGAAACTCTCCTC +
Preference number: 4 (lower is better)
Translates to: STVIPTNSHKGAMLTCQLPTVVE*LEETLL
Trigger: GAGGAGAGTTTCTTCCAGTCACTCAACAACAGTAGG...TAGTTGGCAAGTCAACATTGCCCCTTTGTGGCTATTTGTGGGAATAACGGTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR TCA 90 bp TGTTGTCCCACTGCTGTCTTGGTCCCTCCATCCTTTACAAATCCCTACAACAAATTCCTCACACAAATATaGCTAACCTGCAAACCAGGG +
Preference number: 4 (lower is better)
Translates to: CCPTAVLVPPSFTNPYNKFLTQI*LTCKPG
Trigger: CCCTGGTTTGCAGGTTAGTCATATTTGTGTGAGGAA...TTTGTTGTAGGGATTTGTAAAGGATGGAGGGACCAAGACAGCAGTGGGACAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR TCA 90 bp TGTTGTCCCACTGCTGTCTTGGTCCCTCCATCCTTTACAAATCCCTACAACAAAGAGGAGTCTGGCCGATaGAATGATAGAGAAAGTGAT +
Preference number: 4 (lower is better)
Translates to: CCPTAVLVPPSFTNPYNKEESGR*NDRESD
Trigger: ATCACTTTCTCTATCATTTCATCGGCCAGACTCCTC...TTTGTTGTAGGGATTTGTAAAGGATGGAGGGACCAAGACAGCAGTGGGACAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR TCA 90 bp TGTTGTCCCACTGCTGTCTTGGTCCCTCCATCCTTTACAAATCCCTACAACAAAAACAACGGCATCTCTTaGCAGACCACAAGAATTCTG +
Preference number: 4 (lower is better)
Translates to: CCPTAVLVPPSFTNPYNKNNGIS*QTTRIL
Trigger: CAGAATTCTTGTGGTCTGTCAAGAGATGCCGTTGTT...TTTGTTGTAGGGATTTGTAAAGGATGGAGGGACCAAGACAGCAGTGGGACAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641900.1
CDS-3UTR GCA 90 bp CCAAGCCTGAAGGTACTAAGAGCCCCTTCCTGTAAGCCAATGGGTATAATTTTTATGGAGAGGGACACTTaGTCTTTCTGTCTGTTCCTG +
Preference number: 4 (lower is better)
Translates to: PSLKVLRAPSCKPMGIIFMERDT*SFCLFL
Trigger: CAGGAACAGACAGAAAGAGCAAGTGTCCCTCTCCAT...AAAAATTATACCCATTGGCTTACAGGAAGGGGCTCTTAGTACCTTCAGGCTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR GCA 90 bp CGCTGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAATGCTTGTTTCTCCACCCACCTaGACTAGGGGACTTGATTCT +
Preference number: 4 (lower is better)
Translates to: RCLGKITEEEEQEVLEMLVSPPT*TRGLDS
Trigger: AGAATCAAGTCCCCTAGTGCAGGTGGGTGGAGAAAC...AAGCATTTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCAGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR GCA 90 bp AATGAAGGGAGCCTCAGTGCATGCAATAAACACTCACTAACTGACATTTCTCTATCACTGTTGTCCCACTaGTGTCTTGGTCCCTCCATC +
Preference number: 4 (lower is better)
Translates to: NEGSLSACNKHSLTDISLSLLSH*CLGPSI
Trigger: GATGGAGGGACCAAGACAGCAGTGGGACAACAGTGA...TAGAGAAATGTCAGTTAGTGAGTGTTTATTGCATGCACTGAGGCTCCCTTCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR GCA 90 bp CACTCACTAACTGACATTTCTCTACTTCGCTGCCTAGGTAAAATCACTGAAGAGCAGCAGAGTTGGGTCTaGCCTTCATGGTCTGATTCT +
Preference number: 4 (lower is better)
Translates to: HSLTDISLLRCLGKITEEQQSWV*PSWSDS
Trigger: AGAATCAGACCATGAAGGGCAGACCCAACTCTGCTG...CTCTTCAGTGATTTTACCTAGGCAGCGAAGTAGAGAAATGTCAGTTAGTGAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR GCA 90 bp GACACTATGACATATCTTTCCACATTCAACTACAGCACTTGGGCAGTCAACAGACAGCAGAGTTGGGTCTaGCCTTCATGGTCTGATTCT +
Preference number: 4 (lower is better)
Translates to: DTMTYLSTFNYSTWAVNRQQSWV*PSWSDS
Trigger: AGAATCAGACCATGAAGGGCAGACCCAACTCTGCTG...TCTGTTGACTGCCCAAGTGCTGTAGTTGAATGTGGAAAGATATGTCATAGTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR GCA 90 bp CACTCACTAACTGACATTTCTCTACTTCGCTGCCTAGGTAAAATCACTGAAGAGCATGAGAATTATGGGTaGAGGAAAGACCCACCCCCA +
Preference number: 4 (lower is better)
Translates to: HSLTDISLLRCLGKITEEHENYG*RKDPPP
Trigger: TGGGGGTGGGTCTTTCCTGCACCCATAATTCTCATG...CTCTTCAGTGATTTTACCTAGGCAGCGAAGTAGAGAAATGTCAGTTAGTGAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641900.1
CDS-3UTR CCA 90 bp CGCTGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAATGCTTGAGGGGAGTGACCTTTaGAAAGCTACTCCTGTCTCT +
Preference number: 4 (lower is better)
Translates to: RCLGKITEEEEQEVLEMLEGSDL*KATPVS
Trigger: AGAGACAGGAGTAGCTTTCCAAAGGTCACTCCCCTC...AAGCATTTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCAGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CCA 90 bp ATTTCTCTACTTCGCTGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTAGAGGGGAGTGACCTTTaGAAAGCTACTCCTGTCTCT +
Preference number: 4 (lower is better)
Translates to: ISLLRCLGKITEEEEQEVEGSDL*KATPVS
Trigger: AGAGACAGGAGTAGCTTTCCAAAGGTCACTCCCCTC...TACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCAGCGAAGTAGAGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CCA 90 bp AGTACCGTTATTCCCACAAATAGCCACAAAGGGGCAATGTTGACTTGCCAACTAACTTACAGTTCCACATaGCTGGGGAAGCCTCACAAT +
Preference number: 4 (lower is better)
Translates to: STVIPTNSHKGAMLTCQLTYSST*LGKPHN
Trigger: ATTGTGAGGCTTCCCCAGCCATGTGGAACTGTAAGT...TAGTTGGCAAGTCAACATTGCCCCTTTGTGGCTATTTGTGGGAATAACGGTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641900.1
3UTR CAA 72 bp GGAGAGGGACACTTGCTCTTTCTGTCTGTTCCTGTCTaGTCAGTATTCCTTAGCAGCAACTCTTTATCTTGG +
Preference number: 4 (lower is better)
Translates to: GEGHLLFLSVPV*SVFLSSNSLSW
Trigger: CCAAGATAAAGAGTTGCTGCTAAGGAATACTGACAAGACAGGAACAGACAGAAAGAGCAAGTGTCCCTCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
3UTR CAA 72 bp TCCTCAGTAGTCACAAGCTTTCAGACCCACATAAGATaGGAGCTGCGCCAGTTACTAACACTTATCTCTCAG +
Preference number: 4 (lower is better)
Translates to: SSVVTSFQTHIR*ELRQLLTLISQ
Trigger: CTGAGAGATAAGTGTTAGTAACTGGCGCAGCTCCAATCTTATGTGGGTCTGAAAGCTTGTGACTACTGAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR TCA 90 bp TGTTGTCCCACTGCTGTCTTGGTCCCTCCATCCTTTACAAATCCCTACAACAAACTTTCCTACTGTTGTTaGGTGACTGGAAGAAACTCT +
Preference number: 4 (lower is better)
Translates to: CCPTAVLVPPSFTNPYNKLSYCC*VTGRNS
Trigger: AGAGTTTCTTCCAGTCACTCAACAACAGTAGGAAAG...TTTGTTGTAGGGATTTGTAAAGGATGGAGGGACCAAGACAGCAGTGGGACAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR TCA 90 bp CTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAATGCTTTACATAGGGCTTGCTTCCGGGTaGAATCATGGCAGATGCAGG +
Preference number: 4 (lower is better)
Translates to: LGKITEEEEQEVLEMLYIGLASG*NHGRCR
Trigger: CCTGCATCTGCCATGATTTCACCCGGAAGCAAGCCC...TATGTAAAGCATTTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR TCA 90 bp AGTACCGTTATTCCCACAAATAGCCACAAAGGGGCAATGTTGACTTGCCAACTAGTTGGCCATTTGCATTaGTCTACAGAAGTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: STVIPTNSHKGAMLTCQLVGHLH*STEVWF
Trigger: GAACCAGACTTCTGTAGATCAATGCAAATGGCCAAC...TAGTTGGCAAGTCAACATTGCCCCTTTGTGGCTATTTGTGGGAATAACGGTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR TCA 90 bp TGTTATAGGTGCTCCTCAGTAGTCACAAGCTTTCAGACCCACATAAGATTGGAGTTCCTCACACAAATATaGCTAACCTGCAAACCAGGG +
Preference number: 4 (lower is better)
Translates to: CYRCSSVVTSFQTHIRLEFLTQI*LTCKPG
Trigger: CCCTGGTTTGCAGGTTAGTCATATTTGTGTGAGGAA...CTCCAATCTTATGTGGGTCTGAAAGCTTGTGACTACTGAGGAGCACCTATAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR TCA 90 bp AGTACCGTTATTCCCACAAATAGCCACAAAGGGGCAATGTTGACTTGCCAACTAACAAAGGGGCAATGTTaGCTTGCCAACTATGAAGAG +
Preference number: 4 (lower is better)
Translates to: STVIPTNSHKGAMLTCQLTKGQC*LANYEE
Trigger: CTCTTCATAGTTGGCAAGTCAACATTGCCCCTTTGT...TAGTTGGCAAGTCAACATTGCCCCTTTGTGGCTATTTGTGGGAATAACGGTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR TCA 90 bp CGCTGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAATGCTTAATCACAATGGGATCTaGTGGAGAAGGCCACACACA +
Preference number: 4 (lower is better)
Translates to: RCLGKITEEEEQEVLEMLNHNGI*WRRPHT
Trigger: TGTGTGTGGCCTTCTCCATCAGATCCCATTGTGATT...AAGCATTTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCAGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR TCA 90 bp ATTTCTCTACTTCGCTGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTAGTTGAACAGAAGTGGTaGGAGAAGGCATCTTTGCCT +
Preference number: 4 (lower is better)
Translates to: ISLLRCLGKITEEEEQEVVEQKW*EKASLP
Trigger: AGGCAAAGATGCCTTCTCTCACCACTTCTGTTCAAC...TACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCAGCGAAGTAGAGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641900.1
CDS-3UTR TCA 90 bp CTACTTCGCTGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAGATCTTTCACCTCCCTaGGTAGCTGTATTCCTTGGT +
Preference number: 4 (lower is better)
Translates to: LLRCLGKITEEEEQEVLEDLSPP*VAVFLG
Trigger: ACCAAGGAATACAGCTACTCAGGGAGGTGAAAGATC...TTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCAGCGAAGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641900.1
CDS-3UTR GCA 90 bp TCTCTACTTCGCTGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAATGGAGAGGGACACTTaGTCTTTCTGTCTGTTCCTG +
Preference number: 4 (lower is better)
Translates to: SLLRCLGKITEEEEQEVLMERDT*SFCLFL
Trigger: CAGGAACAGACAGAAAGAGCAAGTGTCCCTCTCCAT...TAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCAGCGAAGTAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR GCA 90 bp CACTCACTAACTGACATTTCTCTACTTCGCTGCCTAGGTAAAATCACTGAAGAGAGTCAAACCCTTCTTTaGCAGCTGTCTCTCTCTGAG +
Preference number: 4 (lower is better)
Translates to: HSLTDISLLRCLGKITEESQTLL*QLSLSE
Trigger: CTCAGAGAGAGACAGCTGGCAAAGAAGGGTTTGACT...CTCTTCAGTGATTTTACCTAGGCAGCGAAGTAGAGAAATGTCAGTTAGTGAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR GCA 90 bp CACTCACTAACTGACATTTCTCTACTTCGCTGCCTAGGTAAAATCACTGAAGAGAGTTCATTCTGGGCTTaGTTCCGGGTGAAATCATGG +
Preference number: 4 (lower is better)
Translates to: HSLTDISLLRCLGKITEESSFWA*FRVKSW
Trigger: CCATGATTTCACCCGGAAGCAAGCCCAGAATGAACT...CTCTTCAGTGATTTTACCTAGGCAGCGAAGTAGAGAAATGTCAGTTAGTGAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR GCA 90 bp AGTACCGTTATTCCCACAAATAGCCACAAAGGGGCAATGTTGACTTGCCAACTATGCACCCTCTTCCAATaGAGTTGGAACATATTCAGG +
Preference number: 4 (lower is better)
Translates to: STVIPTNSHKGAMLTCQLCTLFQ*SWNIFR
Trigger: CCTGAATATGTTCCAACTGCATTGGAAGAGGGTGCA...TAGTTGGCAAGTCAACATTGCCCCTTTGTGGCTATTTGTGGGAATAACGGTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR GCA 90 bp CCAAGCCTGAAGGTACTAAGAGCCCCTTCCTGTAAGCCAATGGGTATAATTTTTTGCACCCTCTTCCAATaGAGTTGGAACATATTCAGG +
Preference number: 4 (lower is better)
Translates to: PSLKVLRAPSCKPMGIIFCTLFQ*SWNIFR
Trigger: CCTGAATATGTTCCAACTGCATTGGAAGAGGGTGCA...AAAAATTATACCCATTGGCTTACAGGAAGGGGCTCTTAGTACCTTCAGGCTTGG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CCA 90 bp AATGAAGGGAGCCTCAGTGCATGCAATAAACACTCACTAACTGACATTTCTCTATGTACTCTGTCATGCTaGCACTGGGAGTCAAACCCT +
Preference number: 4 (lower is better)
Translates to: NEGSLSACNKHSLTDISLCTLSC*HWESNP
Trigger: AGGGTTTGACTCCCAGTGCCAGCATGACAGAGTACA...TAGAGAAATGTCAGTTAGTGAGTGTTTATTGCATGCACTGAGGCTCCCTTCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CCA 90 bp ATGACATATCTTTCCACATTCAACTACAGCACTTGGGCAGTCAACAGATCAAGTTTGAACCTGTGGCTCTaGCTTGAGACAATGAGAGCC +
Preference number: 4 (lower is better)
Translates to: MTYLSTFNYSTWAVNRSSLNLWL*LETMRA
Trigger: GGCTCTCATTGTCTCAAGCCAGAGCCACAGGTTCAA...ACTTGATCTGTTGACTGCCCAAGTGCTGTAGTTGAATGTGGAAAGATATGTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CCA 90 bp ATGACATATCTTTCCACATTCAACTACAGCACTTGGGCAGTCAACAGATCAAGTTTCCGGGTGAAATCATaGCAGATGCAGGGAAAGCAC +
Preference number: 4 (lower is better)
Translates to: MTYLSTFNYSTWAVNRSSFRVKS*QMQGKH
Trigger: GTGCTTTCCCTGCATCTGCCATGATTTCACCCGGAA...ACTTGATCTGTTGACTGCCCAAGTGCTGTAGTTGAATGTGGAAAGATATGTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CCA 90 bp AGTACCGTTATTCCCACAAATAGCCACAAAGGGGCAATGTTGACTTGCCAACTATGGGTCTGCCCTTCATaGTCTGATTCTTTGGTTATC +
Preference number: 4 (lower is better)
Translates to: STVIPTNSHKGAMLTCQLWVCPS*SDSLVI
Trigger: GATAACCAAAGAATCAGACCATGAAGGGCAGACCCA...TAGTTGGCAAGTCAACATTGCCCCTTTGTGGCTATTTGTGGGAATAACGGTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CCA 90 bp AATGAAGGGAGCCTCAGTGCATGCAATAAACACTCACTAACTGACATTTCTCTAACTTCACAGCAGAGTTaGGTCTGCCCTTCATGGTCT +
Preference number: 4 (lower is better)
Translates to: NEGSLSACNKHSLTDISLTSQQS*VCPSWS
Trigger: AGACCATGAAGGGCAGACCCAACTCTGCTGTGAAGT...TAGAGAAATGTCAGTTAGTGAGTGTTTATTGCATGCACTGAGGCTCCCTTCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CCA 90 bp TGTTATAGGTGCTCCTCAGTAGTCACAAGCTTTCAGACCCACATAAGATTGGAGCCTGAGACTGAGAACTaGCATTCAATACAGTACCGT +
Preference number: 4 (lower is better)
Translates to: CYRCSSVVTSFQTHIRLEPETEN*HSIQYR
Trigger: ACGGTACTGTATTGAATGCCAGTTCTCAGTCTCAGG...CTCCAATCTTATGTGGGTCTGAAAGCTTGTGACTACTGAGGAGCACCTATAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CCA 90 bp GACATTTCTCTACTTCGCTGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGCACTTCATTTCCAGTTaGAAATCATCTGCTCCGCCA +
Preference number: 4 (lower is better)
Translates to: DISLLRCLGKITEEEEQEHFISS*KSSAPP
Trigger: TGGCGGAGCAGATGATTTCCAACTGGAAATGAAGTG...CTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCAGCGAAGTAGAGAAATGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CCA 90 bp CGCTGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAATGCTTGAAGCCTCACAATCATaGCAGAAGACAAGAAGGAGC +
Preference number: 4 (lower is better)
Translates to: RCLGKITEEEEQEVLEMLEASQS*QKTRRS
Trigger: GCTCCTTCTTGTCTTCTGCCATGATTGTGAGGCTTC...AAGCATTTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCAGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641900.1
CDS-3UTR TCA 90 bp AGTACCGTTATTCCCACAAATAGCCACAAAGGGGCAATGTTGACTTGCCAACTAGAAACATTAGAAGGTTaGAACATGGAGAGGGACACT +
Preference number: 4 (lower is better)
Translates to: STVIPTNSHKGAMLTCQLETLEG*NMERDT
Trigger: AGTGTCCCTCTCCATGTTTCAACCTTCTAATGTTTC...TAGTTGGCAAGTCAACATTGCCCCTTTGTGGCTATTTGTGGGAATAACGGTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR TCA 90 bp TGTTGTCCCACTGCTGTCTTGGTCCCTCCATCCTTTACAAATCCCTACAACAAATCAATCCCTAGACTCTaGAGAAGCAAAAATGGGTTT +
Preference number: 4 (lower is better)
Translates to: CCPTAVLVPPSFTNPYNKSIPRL*RSKNGF
Trigger: AAACCCATTTTTGCTTCTTCAGAGTCTAGGGATTGA...TTTGTTGTAGGGATTTGTAAAGGATGGAGGGACCAAGACAGCAGTGGGACAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR TCA 90 bp CCAAGCCTGAAGGTACTAAGAGCCCCTTCCTGTAAGCCAATGGGTATAATTTTTGTAAAAATGAGACCTTaGTCCCTCTCTTGGCTCTAT +
Preference number: 4 (lower is better)
Translates to: PSLKVLRAPSCKPMGIIFVKMRP*SLSWLY
Trigger: ATAGAGCCAAGAGAGGGATCAAGGTCTCATTTTTAC...AAAAATTATACCCATTGGCTTACAGGAAGGGGCTCTTAGTACCTTCAGGCTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000641900.1
CDS-3UTR GCA 90 bp ATGACATATCTTTCCACATTCAACTACAGCACTTGGGCAGTCAACAGATCAAGTAGTTCATTCTGGGCTTaGTTCCGGGTGAAATCATGG +
Preference number: 4 (lower is better)
Translates to: MTYLSTFNYSTWAVNRSSSSFWA*FRVKSW
Trigger: CCATGATTTCACCCGGAAGCAAGCCCAGAATGAACT...ACTTGATCTGTTGACTGCCCAAGTGCTGTAGTTGAATGTGGAAAGATATGTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR GCA 90 bp CTACTTCGCTGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAGATATCAGATCTTCCTaGTCAAGAGGCTGTGTTCCT +
Preference number: 4 (lower is better)
Translates to: LLRCLGKITEEEEQEVLEDIRSS*SRGCVP
Trigger: AGGAACACAGCCTCTTGAGCAGGAAGATCTGATATC...TTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCAGCGAAGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR GCA 90 bp CCAAGCCTGAAGGTACTAAGAGCCCCTTCCTGTAAGCCAATGGGTATAATTTTTTGTGTTAGGCCACTGTaGTATCATTGTTACAGTAGC +
Preference number: 4 (lower is better)
Translates to: PSLKVLRAPSCKPMGIIFCVRPL*YHCYSS
Trigger: GCTACTGTAACAATGATAGCACAGTGGCCTAACACA...AAAAATTATACCCATTGGCTTACAGGAAGGGGCTCTTAGTACCTTCAGGCTTGG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR GCA 90 bp CTTCGCTGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAATGTTTCTCTTTCTGGCTTaGCACCCAGATTCAGAAGCA +
Preference number: 4 (lower is better)
Translates to: LRCLGKITEEEEQEVLEMFLFLA*HPDSEA
Trigger: TGCTTCTGAATCTGGGTGGCAAGCCAGAAAGAGAAA...CATTTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCAGCGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR GCA 90 bp TGTTGTCCCACTGCTGTCTTGGTCCCTCCATCCTTTACAAATCCCTACAACAAATTCGAGGGGGTTTATTaGCAAAGAAACATGAACTTG +
Preference number: 4 (lower is better)
Translates to: CCPTAVLVPPSFTNPYNKFEGVY*QRNMNL
Trigger: CAAGTTCATGTTTCTTTGGCAATAAACCCCCTCGAA...TTTGTTGTAGGGATTTGTAAAGGATGGAGGGACCAAGACAGCAGTGGGACAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641900.1
CDS-3UTR CCA 90 bp CCAAGCCTGAAGGTACTAAGAGCCCCTTCCTGTAAGCCAATGGGTATAATTTTTGTAAAGGAAGGAATCTaGTTCAGTAATGAAGGGAGC +
Preference number: 4 (lower is better)
Translates to: PSLKVLRAPSCKPMGIIFVKEGI*FSNEGS
Trigger: GCTCCCTTCATTACTGAACCAGATTCCTTCCTTTAC...AAAAATTATACCCATTGGCTTACAGGAAGGGGCTCTTAGTACCTTCAGGCTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CCA 90 bp TCTCTACTTCGCTGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTATCTTTGAGTTCATTCTaGGCTTGCTTCCGGGTGAAA +
Preference number: 4 (lower is better)
Translates to: SLLRCLGKITEEEEQEVLSLSSF*ACFRVK
Trigger: TTTCACCCGGAAGCAAGCCCAGAATGAACTCAAAGA...TAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCAGCGAAGTAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CCA 90 bp ATTTCTCTACTTCGCTGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATCTTTGAGTTCATTCTaGGCTTGCTTCCGGGTGAAA +
Preference number: 4 (lower is better)
Translates to: ISLLRCLGKITEEEEQEVSLSSF*ACFRVK
Trigger: TTTCACCCGGAAGCAAGCCCAGAATGAACTCAAAGA...TACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCAGCGAAGTAGAGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CCA 90 bp GACACTATGACATATCTTTCCACATTCAACTACAGCACTTGGGCAGTCAACAGATGGGTCTGCCCTTCATaGTCTGATTCTTTGGTTATC +
Preference number: 4 (lower is better)
Translates to: DTMTYLSTFNYSTWAVNRWVCPS*SDSLVI
Trigger: GATAACCAAAGAATCAGACCATGAAGGGCAGACCCA...TCTGTTGACTGCCCAAGTGCTGTAGTTGAATGTGGAAAGATATGTCATAGTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CCA 90 bp TCTCTACTTCGCTGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTACCTGAGACTGAGAACTaGCATTCAATACAGTACCGT +
Preference number: 4 (lower is better)
Translates to: SLLRCLGKITEEEEQEVLPETEN*HSIQYR
Trigger: ACGGTACTGTATTGAATGCCAGTTCTCAGTCTCAGG...TAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCAGCGAAGTAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CCA 90 bp CACTCACTAACTGACATTTCTCTACTTCGCTGCCTAGGTAAAATCACTGAAGAGTCTTTTGCAAGCAGCTaGATCTATGTGAGGAGTCTG +
Preference number: 4 (lower is better)
Translates to: HSLTDISLLRCLGKITEESFASS*IYVRSL
Trigger: CAGACTCCTCACATAGATCCAGCTGCTTGCAAAAGA...CTCTTCAGTGATTTTACCTAGGCAGCGAAGTAGAGAAATGTCAGTTAGTGAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CCA 90 bp AATGAAGGGAGCCTCAGTGCATGCAATAAACACTCACTAACTGACATTTCTCTATACATCTTGCATGGGTaGTGGGAGGAAAAGAGAGGA +
Preference number: 4 (lower is better)
Translates to: NEGSLSACNKHSLTDISLYILHG*WEEKRG
Trigger: TCCTCTCTTTTCCTCCCACCACCCATGCAAGATGTA...TAGAGAAATGTCAGTTAGTGAGTGTTTATTGCATGCACTGAGGCTCCCTTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641900.1
3UTR CAA 72 bp AGATCTGAGTTTTGGCCAAATAACATAGACTCCTCTTaGAGTTCATTCTGGGCTTGCTTCCGGGTGAAATCA +
Preference number: 4 (lower is better)
Translates to: RSEFWPNNIDSS*SSFWACFRVKS
Trigger: TGATTTCACCCGGAAGCAAGCCCAGAATGAACTCAAAGAGGAGTCTATGTTATTTGGCCAAAACTCAGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR TCA 90 bp GACATTTCTCTACTTCGCTGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGCTCTGCAGTAACTTCTaGATTCCCTGTTTTATCTCT +
Preference number: 4 (lower is better)
Translates to: DISLLRCLGKITEEEEQELCSNF*IPCFIS
Trigger: AGAGATAAAACAGGGAATTCAGAAGTTACTGCAGAG...CTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCAGCGAAGTAGAGAAATGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641423.1
ENST00000641900.1
ENST00000641938.1
CDS-3UTR TCA 90 bp CTTCGCTGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAATGTGCTTCCCACATATGTaGTCTTTGGTCATTTCCCTT +
Preference number: 4 (lower is better)
Translates to: LRCLGKITEEEEQEVLEMCFPHM*SLVISL
Trigger: AAGGGAAATGACCAAAGATCACATATGTGGGAAGCA...CATTTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCAGCGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR TCA 90 bp TCTCTACTTCGCTGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAAGCAAAGGCTGGTCTTaGGCTTCAATTGCAATTGAT +
Preference number: 4 (lower is better)
Translates to: SLLRCLGKITEEEEQEVLSKGWS*ASIAID
Trigger: ATCAATTGCAATTGAAGCTCAAGACCAGCCTTTGCT...TAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCAGCGAAGTAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR TCA 90 bp TGTTGTCCCACTGCTGTCTTGGTCCCTCCATCCTTTACAAATCCCTACAACAAATATGTACACCCAGTTTaGGTCAAGCATCTCATAATT +
Preference number: 4 (lower is better)
Translates to: CCPTAVLVPPSFTNPYNKYVHPV*VKHLII
Trigger: AATTATGAGATGCTTGACTCAAACTGGGTGTACATA...TTTGTTGTAGGGATTTGTAAAGGATGGAGGGACCAAGACAGCAGTGGGACAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR TCA 90 bp CCAAGCCTGAAGGTACTAAGAGCCCCTTCCTGTAAGCCAATGGGTATAATTTTTAGCTTGACAATTTTGTaGGAAATCTGTGGTCCTCTA +
Preference number: 4 (lower is better)
Translates to: PSLKVLRAPSCKPMGIIFSLTIL*EICGPL
Trigger: TAGAGGACCACAGATTTCTCACAAAATTGTCAAGCT...AAAAATTATACCCATTGGCTTACAGGAAGGGGCTCTTAGTACCTTCAGGCTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR TCA 90 bp TGTTGTCCCACTGCTGTCTTGGTCCCTCCATCCTTTACAAATCCCTACAACAAAAGTCAGCTATGGTATTaGATAGCAATGTGCAATGAT +
Preference number: 4 (lower is better)
Translates to: CCPTAVLVPPSFTNPYNKSQLWY*IAMCND
Trigger: ATCATTGCACATTGCTATTCAATACCATAGCTGACT...TTTGTTGTAGGGATTTGTAAAGGATGGAGGGACCAAGACAGCAGTGGGACAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR TCA 90 bp CTTCGCTGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAATGTCTTTCCACTGGCCTTaGTTTAAGTCAGCTATGGTA +
Preference number: 4 (lower is better)
Translates to: LRCLGKITEEEEQEVLEMSFHWP*FKSAMV
Trigger: TACCATAGCTGACTTAAATCAAGGCCAGTGGAAAGA...CATTTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCAGCGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR TCA 90 bp GACATTTCTCTACTTCGCTGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGCTTAGGTGTTTGTTTTaGGCTTTGGCTACCAACATA +
Preference number: 4 (lower is better)
Translates to: DISLLRCLGKITEEEEQELRCLF*ALATNI
Trigger: TATGTTGGTAGCCAAAGCTCAAAACAAACACCTAAG...CTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCAGCGAAGTAGAGAAATGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR TCA 90 bp TGTTATAGGTGCTCCTCAGTAGTCACAAGCTTTCAGACCCACATAAGATTGGAGCTTAGGTGTTTGTTTTaGGCTTTGGCTACCAACATA +
Preference number: 4 (lower is better)
Translates to: CYRCSSVVTSFQTHIRLELRCLF*ALATNI
Trigger: TATGTTGGTAGCCAAAGCTCAAAACAAACACCTAAG...CTCCAATCTTATGTGGGTCTGAAAGCTTGTGACTACTGAGGAGCACCTATAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR TCA 90 bp TGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAATGCTTTACAATCACAATGGGATCTaGTGGAGAAGGCCACACACA +
Preference number: 4 (lower is better)
Translates to: CLGKITEEEEQEVLEMLYNHNGI*WRRPHT
Trigger: TGTGTGTGGCCTTCTCCATCAGATCCCATTGTGATT...GTAAAGCATTTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR GCA 90 bp TGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAATGCTTTACAGTCAAACCCTTCTTTaGCAGCTGTCTCTCTCTGAG +
Preference number: 4 (lower is better)
Translates to: CLGKITEEEEQEVLEMLYSQTLL*QLSLSE
Trigger: CTCAGAGAGAGACAGCTGGCAAAGAAGGGTTTGACT...GTAAAGCATTTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR GCA 90 bp GACACTATGACATATCTTTCCACATTCAACTACAGCACTTGGGCAGTCAACAGATTCTCATGTTCTGAATaGACCCTCTTCCAATGCAGT +
Preference number: 4 (lower is better)
Translates to: DTMTYLSTFNYSTWAVNRFSCSE*TLFQCS
Trigger: ACTGCATTGGAAGAGGGTGCATTCAGAACATGAGAA...TCTGTTGACTGCCCAAGTGCTGTAGTTGAATGTGGAAAGATATGTCATAGTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR GCA 90 bp AATGAAGGGAGCCTCAGTGCATGCAATAAACACTCACTAACTGACATTTCTCTAGATATCAGATCTTCCTaGTCAAGAGGCTGTGTTCCT +
Preference number: 4 (lower is better)
Translates to: NEGSLSACNKHSLTDISLDIRSS*SRGCVP
Trigger: AGGAACACAGCCTCTTGAGCAGGAAGATCTGATATC...TAGAGAAATGTCAGTTAGTGAGTGTTTATTGCATGCACTGAGGCTCCCTTCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR GCA 90 bp CTTCGCTGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAATGTGTGTTAGGCCACTGTaGTATCATTGTTACAGTAGC +
Preference number: 4 (lower is better)
Translates to: LRCLGKITEEEEQEVLEMCVRPL*YHCYSS
Trigger: GCTACTGTAACAATGATAGCACAGTGGCCTAACACA...CATTTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCAGCGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR GCA 90 bp ATGACATATCTTTCCACATTCAACTACAGCACTTGGGCAGTCAACAGATCAAGTTTTCTCTTTCTGGCTTaGCACCCAGATTCAGAAGCA +
Preference number: 4 (lower is better)
Translates to: MTYLSTFNYSTWAVNRSSFLFLA*HPDSEA
Trigger: TGCTTCTGAATCTGGGTGGCAAGCCAGAAAGAGAAA...ACTTGATCTGTTGACTGCCCAAGTGCTGTAGTTGAATGTGGAAAGATATGTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CCA 90 bp CTTCGCTGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAATGCCTGTTTTATCTCTTTaGTCCGAACCCCATACACAA +
Preference number: 4 (lower is better)
Translates to: LRCLGKITEEEEQEVLEMPVLSL*SEPHTQ
Trigger: TTGTGTATGGGGTTCGGACCAAAGAGATAAAACAGG...CATTTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCAGCGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641423.1
ENST00000641900.1
ENST00000641938.1
CDS-3UTR CCA 90 bp CTACTTCGCTGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAACCTGTTTTATCTCTTTaGTCCGAACCCCATACACAA +
Preference number: 4 (lower is better)
Translates to: LLRCLGKITEEEEQEVLEPVLSL*SEPHTQ
Trigger: TTGTGTATGGGGTTCGGACCAAAGAGATAAAACAGG...TTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCAGCGAAGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641423.1
ENST00000641900.1
ENST00000641938.1
CDS-3UTR CCA 90 bp CTACTTCGCTGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAATTCAACTACAGCACTTaGGCAGTCAACAGATCAAGT +
Preference number: 4 (lower is better)
Translates to: LLRCLGKITEEEEQEVLEFNYST*AVNRSS
Trigger: ACTTGATCTGTTGACTGCCCAAGTGCTGTAGTTGAA...TTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCAGCGAAGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CCA 90 bp ATTTCTCTACTTCGCTGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTCAACTACAGCACTTaGGCAGTCAACAGATCAAGT +
Preference number: 4 (lower is better)
Translates to: ISLLRCLGKITEEEEQEVFNYST*AVNRSS
Trigger: ACTTGATCTGTTGACTGCCCAAGTGCTGTAGTTGAA...TACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCAGCGAAGTAGAGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CCA 90 bp CTTCGCTGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAATGCAACCTCTTTCCAAGTaGAGGTTTCTTCCCATAGAT +
Preference number: 4 (lower is better)
Translates to: LRCLGKITEEEEQEVLEMQPLSK*RFLPID
Trigger: ATCTATGGGAAGAAACCTCCACTTGGAAAGAGGTTG...CATTTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCAGCGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CCA 90 bp TCTCTACTTCGCTGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTACAACCTCTTTCCAAGTaGAGGTTTCTTCCCATAGAT +
Preference number: 4 (lower is better)
Translates to: SLLRCLGKITEEEEQEVLQPLSK*RFLPID
Trigger: ATCTATGGGAAGAAACCTCCACTTGGAAAGAGGTTG...TAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCAGCGAAGTAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CCA 90 bp TGTTGTCCCACTGCTGTCTTGGTCCCTCCATCCTTTACAAATCCCTACAACAAATTTGTGAGAAATCTGTaGTCCTCTAAACCTCTATAC +
Preference number: 4 (lower is better)
Translates to: CCPTAVLVPPSFTNPYNKFVRNL*SSKPLY
Trigger: GTATAGAGGTTTAGAGGACCACAGATTTCTCACAAA...TTTGTTGTAGGGATTTGTAAAGGATGGAGGGACCAAGACAGCAGTGGGACAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CCA 90 bp TGTTGTCCCACTGCTGTCTTGGTCCCTCCATCCTTTACAAATCCCTACAACAAACTCTTCCAATGCAGTTaGAACATATTCAGGTTGTAT +
Preference number: 4 (lower is better)
Translates to: CCPTAVLVPPSFTNPYNKLFQCS*NIFRLY
Trigger: ATACAACCTGAATATGTTCCAACTGCATTGGAAGAG...TTTGTTGTAGGGATTTGTAAAGGATGGAGGGACCAAGACAGCAGTGGGACAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CCA 90 bp CCAAGCCTGAAGGTACTAAGAGCCCCTTCCTGTAAGCCAATGGGTATAATTTTTCTAATTCAATGCGTGTaGGTTTTTAGTGTACTCTGC +
Preference number: 4 (lower is better)
Translates to: PSLKVLRAPSCKPMGIIFLIQCV*VFSVLC
Trigger: GCAGAGTACACTAAAAACCCACACGCATTGAATTAG...AAAAATTATACCCATTGGCTTACAGGAAGGGGCTCTTAGTACCTTCAGGCTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CCA 90 bp ATTTCTCTACTTCGCTGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATATTCTTTCTCTTTCTaGCTTGCCACCCAGATTCAG +
Preference number: 4 (lower is better)
Translates to: ISLLRCLGKITEEEEQEVYSFSF*LATQIQ
Trigger: CTGAATCTGGGTGGCAAGCCAGAAAGAGAAAGAATA...TACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCAGCGAAGTAGAGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CCA 90 bp ATGACATATCTTTCCACATTCAACTACAGCACTTGGGCAGTCAACAGATCAAGTTCTTTTGCAAGCAGCTaGATCTATGTGAGGAGTCTG +
Preference number: 4 (lower is better)
Translates to: MTYLSTFNYSTWAVNRSSSFASS*IYVRSL
Trigger: CAGACTCCTCACATAGATCCAGCTGCTTGCAAAAGA...ACTTGATCTGTTGACTGCCCAAGTGCTGTAGTTGAATGTGGAAAGATATGTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
3UTR CAA 72 bp AGAAACATTAGAAGGTTGAAACATGGAGAGGGACACTaGCTCTTTCTGTCTGTTCCTGTCTTGTCAGTATTC +
Preference number: 4 (lower is better)
Translates to: RNIRRLKHGEGH*LFLSVPVLSVF
Trigger: GAATACTGACAAGACAGGAACAGACAGAAAGAGCAAGTGTCCCTCTCCATGTTTCAACCTTCTAATGTTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
3UTR CAA 72 bp TTTCTACCTACAGAGAGCAACAGAAACATTAGAAGGTaGAAACATGGAGAGGGACACTTGCTCTTTCTGTCT +
Preference number: 4 (lower is better)
Translates to: FLPTESNRNIRR*KHGEGHLLFLS
Trigger: AGACAGAAAGAGCAAGTGTCCCTCTCCATGTTTCAACCTTCTAATGTTTCTGTTGCTCTCTGTAGGTAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR TCA 90 bp GACACTATGACATATCTTTCCACATTCAACTACAGCACTTGGGCAGTCAACAGACTCTGCAGTAACTTCTaGATTCCCTGTTTTATCTCT +
Preference number: 4 (lower is better)
Translates to: DTMTYLSTFNYSTWAVNRLCSNF*IPCFIS
Trigger: AGAGATAAAACAGGGAATTCAGAAGTTACTGCAGAG...TCTGTTGACTGCCCAAGTGCTGTAGTTGAATGTGGAAAGATATGTCATAGTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR TCA 90 bp CGCTGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAATGCTTCTCTGCAGTAACTTCTaGATTCCCTGTTTTATCTCT +
Preference number: 4 (lower is better)
Translates to: RCLGKITEEEEQEVLEMLLCSNF*IPCFIS
Trigger: AGAGATAAAACAGGGAATTCAGAAGTTACTGCAGAG...AAGCATTTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCAGCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641423.1
ENST00000641900.1
ENST00000641938.1
CDS-3UTR TCA 90 bp ATGACATATCTTTCCACATTCAACTACAGCACTTGGGCAGTCAACAGATCAAGTTGCTTCCCACATATGTaGTCTTTGGTCATTTCCCTT +
Preference number: 4 (lower is better)
Translates to: MTYLSTFNYSTWAVNRSSCFPHM*SLVISL
Trigger: AAGGGAAATGACCAAAGATCACATATGTGGGAAGCA...ACTTGATCTGTTGACTGCCCAAGTGCTGTAGTTGAATGTGGAAAGATATGTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR TCA 90 bp ATGACATATCTTTCCACATTCAACTACAGCACTTGGGCAGTCAACAGATCAAGTCTTTCCTACTGTTGTTaGGTGACTGGAAGAAACTCT +
Preference number: 4 (lower is better)
Translates to: MTYLSTFNYSTWAVNRSSLSYCC*VTGRNS
Trigger: AGAGTTTCTTCCAGTCACTCAACAACAGTAGGAAAG...ACTTGATCTGTTGACTGCCCAAGTGCTGTAGTTGAATGTGGAAAGATATGTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR TCA 90 bp CTTCGCTGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAATGAAATATGACAAATACTaGGTTGAACCTGTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: LRCLGKITEEEEQEVLEMKYDKY*VEPVAL
Trigger: CAGAGCCACAGGTTCAACTCAGTATTTGTCATATTT...CATTTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCAGCGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR TCA 90 bp ATTTCTCTACTTCGCTGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTAAAATATGACAAATACTaGGTTGAACCTGTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: ISLLRCLGKITEEEEQEVKYDKY*VEPVAL
Trigger: CAGAGCCACAGGTTCAACTCAGTATTTGTCATATTT...TACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCAGCGAAGTAGAGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR TCA 90 bp TGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAATGCTTTACGTTGGCCATTTGCATTaGTCTACAGAAGTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: CLGKITEEEEQEVLEMLYVGHLH*STEVWF
Trigger: GAACCAGACTTCTGTAGATCAATGCAAATGGCCAAC...GTAAAGCATTTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR TCA 90 bp CGCTGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAATGCTTAGCTTGACAATTTTGTaGGAAATCTGTGGTCCTCTA +
Preference number: 4 (lower is better)
Translates to: RCLGKITEEEEQEVLEMLSLTIL*EICGPL
Trigger: TAGAGGACCACAGATTTCTCACAAAATTGTCAAGCT...AAGCATTTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCAGCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR TCA 90 bp CCAAGCCTGAAGGTACTAAGAGCCCCTTCCTGTAAGCCAATGGGTATAATTTTTCCTTTATCATCTGTATaGGGATTTACTTCAAAGCCT +
Preference number: 4 (lower is better)
Translates to: PSLKVLRAPSCKPMGIIFPLSSV*GFTSKP
Trigger: AGGCTTTGAAGTAAATCCTCATACAGATGATAAAGG...AAAAATTATACCCATTGGCTTACAGGAAGGGGCTCTTAGTACCTTCAGGCTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR TCA 90 bp AATGAAGGGAGCCTCAGTGCATGCAATAAACACTCACTAACTGACATTTCTCTATCTTTCCACTGGCCTTaGTTTAAGTCAGCTATGGTA +
Preference number: 4 (lower is better)
Translates to: NEGSLSACNKHSLTDISLSFHWP*FKSAMV
Trigger: TACCATAGCTGACTTAAATCAAGGCCAGTGGAAAGA...TAGAGAAATGTCAGTTAGTGAGTGTTTATTGCATGCACTGAGGCTCCCTTCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR TCA 90 bp CACTCACTAACTGACATTTCTCTACTTCGCTGCCTAGGTAAAATCACTGAAGAGGCTATAAACTTTCTCTaGTGTCTCAGAACTCTCACT +
Preference number: 4 (lower is better)
Translates to: HSLTDISLLRCLGKITEEAINFL*CLRTLT
Trigger: AGTGAGAGTTCTGAGACATCAGAGAAAGTTTATAGC...CTCTTCAGTGATTTTACCTAGGCAGCGAAGTAGAGAAATGTCAGTTAGTGAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR TCA 90 bp TGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAATGCTTTACACAAAGGGGCAATGTTaGCTTGCCAACTATGAAGAG +
Preference number: 4 (lower is better)
Translates to: CLGKITEEEEQEVLEMLYTKGQC*LANYEE
Trigger: CTCTTCATAGTTGGCAAGTCAACATTGCCCCTTTGT...GTAAAGCATTTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR TCA 90 bp TGTTATAGGTGCTCCTCAGTAGTCACAAGCTTTCAGACCCACATAAGATTGGAGATTCTTATGAATACCTaGCTCATGTCAGTGATTTGG +
Preference number: 4 (lower is better)
Translates to: CYRCSSVVTSFQTHIRLEILMNT*LMSVIW
Trigger: CCAAATCACTGACATGAGTCAGGTATTCATAAGAAT...CTCCAATCTTATGTGGGTCTGAAAGCTTGTGACTACTGAGGAGCACCTATAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR TCA 90 bp ATTTCTCTACTTCGCTGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTAGGAATGAGGTGTGGGTaGGAAGTAAATTTTATTGTG +
Preference number: 4 (lower is better)
Translates to: ISLLRCLGKITEEEEQEVGMRCG*EVNFIV
Trigger: CACAATAAAATTTACTTCTCACCCACACCTCATTCC...TACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCAGCGAAGTAGAGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR TCA 90 bp TCTCTACTTCGCTGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGGAATGAGGTGTGGGTaGGAAGTAAATTTTATTGTG +
Preference number: 4 (lower is better)
Translates to: SLLRCLGKITEEEEQEVLGMRCG*EVNFIV
Trigger: CACAATAAAATTTACTTCTCACCCACACCTCATTCC...TAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCAGCGAAGTAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR TCA 90 bp ATTTCTCTACTTCGCTGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTAACAGAATATCACTGGTaGAAGAGAAATCACAATGGG +
Preference number: 4 (lower is better)
Translates to: ISLLRCLGKITEEEEQEVTEYHW*KRNHNG
Trigger: CCCATTGTGATTTCTCTTTCACCAGTGATATTCTGT...TACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCAGCGAAGTAGAGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR TCA 90 bp AGTACCGTTATTCCCACAAATAGCCACAAAGGGGCAATGTTGACTTGCCAACTAATTGCCTTTCTAATTTaGATCTCAGTTTGGCTGTTG +
Preference number: 4 (lower is better)
Translates to: STVIPTNSHKGAMLTCQLIAFLI*ISVWLL
Trigger: CAACAGCCAAACTGAGATTCAAATTAGAAAGGCAAT...TAGTTGGCAAGTCAACATTGCCCCTTTGTGGCTATTTGTGGGAATAACGGTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641900.1
CDS-3UTR TCA 90 bp AATGAAGGGAGCCTCAGTGCATGCAATAAACACTCACTAACTGACATTTCTCTATTTTTCCAAGAGTATTaGCTCAGGTATCTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: NEGSLSACNKHSLTDISLFFQEY*LRYLSS
Trigger: GGAGGAGAGATACCTGAGTCAATACTCTTGGAAAAA...TAGAGAAATGTCAGTTAGTGAGTGTTTATTGCATGCACTGAGGCTCCCTTCATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641900.1
CDS-3UTR GCA 90 bp TGTTATAGGTGCTCCTCAGTAGTCACAAGCTTTCAGACCCACATAAGATTGGAGATTTCTCTACTTCGCTaGCTAGGTAAAATCACTGAA +
Preference number: 4 (lower is better)
Translates to: CYRCSSVVTSFQTHIRLEISLLR*LGKITE
Trigger: TTCAGTGATTTTACCTAGGCAGCGAAGTAGAGAAAT...CTCCAATCTTATGTGGGTCTGAAAGCTTGTGACTACTGAGGAGCACCTATAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR GCA 90 bp CTACTTCGCTGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAATCCACTCAAGACAGTaGTTGAAAACCTTTACAGAG +
Preference number: 4 (lower is better)
Translates to: LLRCLGKITEEEEQEVLEIHSRQ*LKTFTE
Trigger: CTCTGTAAAGGTTTTCAAGCACTGTCTTGAGTGGAT...TTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCAGCGAAGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR GCA 90 bp AATGAAGGGAGCCTCAGTGCATGCAATAAACACTCACTAACTGACATTTCTCTATTCTCATGTTCTGAATaGACCCTCTTCCAATGCAGT +
Preference number: 4 (lower is better)
Translates to: NEGSLSACNKHSLTDISLFSCSE*TLFQCS
Trigger: ACTGCATTGGAAGAGGGTGCATTCAGAACATGAGAA...TAGAGAAATGTCAGTTAGTGAGTGTTTATTGCATGCACTGAGGCTCCCTTCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR GCA 90 bp ATTTCTCTACTTCGCTGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATCTCAGAACTCTCACTaGCTAGAATATACACCAAAG +
Preference number: 4 (lower is better)
Translates to: ISLLRCLGKITEEEEQEVSQNSH*LEYTPK
Trigger: CTTTGGTGTATATTCTAGGCAGTGAGAGTTCTGAGA...TACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCAGCGAAGTAGAGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR GCA 90 bp CTACTTCGCTGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAATCATTTTGCTCAGTTaGCTCATCTGCAAAAATGGG +
Preference number: 4 (lower is better)
Translates to: LLRCLGKITEEEEQEVLEIILLS*LICKNG
Trigger: CCCATTTTTGCAGATGAGGCAACTGAGCAAAATGAT...TTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCAGCGAAGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR GCA 90 bp TGTTATAGGTGCTCCTCAGTAGTCACAAGCTTTCAGACCCACATAAGATTGGAGGAAAGTAGGTTCAAATaGAGTGTCACTCCAAAAGAA +
Preference number: 4 (lower is better)
Translates to: CYRCSSVVTSFQTHIRLEESRFK*SVTPKE
Trigger: TTCTTTTGGAGTGACACTGCATTTGAACCTACTTTC...CTCCAATCTTATGTGGGTCTGAAAGCTTGTGACTACTGAGGAGCACCTATAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641900.1
CDS-3UTR GCA 90 bp TGTTGTCCCACTGCTGTCTTGGTCCCTCCATCCTTTACAAATCCCTACAACAAAAGACCACAAGAATTCTaGATAAACTCAAAAGCTAAG +
Preference number: 4 (lower is better)
Translates to: CCPTAVLVPPSFTNPYNKRPQEF*INSKAK
Trigger: CTTAGCTTTTGAGTTTATGCAGAATTCTTGTGGTCT...TTTGTTGTAGGGATTTGTAAAGGATGGAGGGACCAAGACAGCAGTGGGACAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641900.1
CDS-3UTR GCA 90 bp ATTTCTCTACTTCGCTGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTAAAAGAGAGGAGCTTGTaGAGGGAAACTCTAGTTTTT +
Preference number: 4 (lower is better)
Translates to: ISLLRCLGKITEEEEQEVKERSL*RETLVF
Trigger: AAAAACTAGAGTTTCCCTGCACAAGCTCCTCTCTTT...TACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCAGCGAAGTAGAGAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641900.1
CDS-3UTR CCA 90 bp TGTTATAGGTGCTCCTCAGTAGTCACAAGCTTTCAGACCCACATAAGATTGGAGTCCAGATTGGTTGGTTaGTTGATTGGTTTTGGTTTT +
Preference number: 4 (lower is better)
Translates to: CYRCSSVVTSFQTHIRLESRLVG*LIGFGF
Trigger: AAAACCAAAACCAATCAACCAACCAACCAATCTGGA...CTCCAATCTTATGTGGGTCTGAAAGCTTGTGACTACTGAGGAGCACCTATAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CCA 90 bp ATGACATATCTTTCCACATTCAACTACAGCACTTGGGCAGTCAACAGATCAAGTAGTCTCCAGATTGGTTaGTTGGTTGATTGGTTTTGG +
Preference number: 4 (lower is better)
Translates to: MTYLSTFNYSTWAVNRSSSLQIG*LVDWFW
Trigger: CCAAAACCAATCAACCAACCAACCAATCTGGAGACT...ACTTGATCTGTTGACTGCCCAAGTGCTGTAGTTGAATGTGGAAAGATATGTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CCA 90 bp TGTTATAGGTGCTCCTCAGTAGTCACAAGCTTTCAGACCCACATAAGATTGGAGTTTGTGAGAAATCTGTaGTCCTCTAAACCTCTATAC +
Preference number: 4 (lower is better)
Translates to: CYRCSSVVTSFQTHIRLEFVRNL*SSKPLY
Trigger: GTATAGAGGTTTAGAGGACCACAGATTTCTCACAAA...CTCCAATCTTATGTGGGTCTGAAAGCTTGTGACTACTGAGGAGCACCTATAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CCA 90 bp AGTACCGTTATTCCCACAAATAGCCACAAAGGGGCAATGTTGACTTGCCAACTACTCTTCCAATGCAGTTaGAACATATTCAGGTTGTAT +
Preference number: 4 (lower is better)
Translates to: STVIPTNSHKGAMLTCQLLFQCS*NIFRLY
Trigger: ATACAACCTGAATATGTTCCAACTGCATTGGAAGAG...TAGTTGGCAAGTCAACATTGCCCCTTTGTGGCTATTTGTGGGAATAACGGTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CCA 90 bp AATGAAGGGAGCCTCAGTGCATGCAATAAACACTCACTAACTGACATTTCTCTATATTCTTTCTCTTTCTaGCTTGCCACCCAGATTCAG +
Preference number: 4 (lower is better)
Translates to: NEGSLSACNKHSLTDISLYSFSF*LATQIQ
Trigger: CTGAATCTGGGTGGCAAGCCAGAAAGAGAAAGAATA...TAGAGAAATGTCAGTTAGTGAGTGTTTATTGCATGCACTGAGGCTCCCTTCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CCA 90 bp TGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAATGCTTTACCACTTCATTTCCAGTTaGAAATCATCTGCTCCGCCA +
Preference number: 4 (lower is better)
Translates to: CLGKITEEEEQEVLEMLYHFISS*KSSAPP
Trigger: TGGCGGAGCAGATGATTTCCAACTGGAAATGAAGTG...GTAAAGCATTTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR TCA 90 bp ATTTCTCTACTTCGCTGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTAAGAAACCTGACACTATaGCATATCTTTCCACATTCA +
Preference number: 4 (lower is better)
Translates to: ISLLRCLGKITEEEEQEVRNLTL*HIFPHS
Trigger: TGAATGTGGAAAGATATGTCATAGTGTCAGGTTTCT...TACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCAGCGAAGTAGAGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR TCA 90 bp CTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAATGCTTTACATACCTACTGTTGTTGAGTaGCTGGAAGAAACTCTCCTC +
Preference number: 4 (lower is better)
Translates to: LGKITEEEEQEVLEMLYIPTVVE*LEETLL
Trigger: GAGGAGAGTTTCTTCCAGTCACTCAACAACAGTAGG...TATGTAAAGCATTTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR TCA 90 bp TCTCTACTTCGCTGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAAGTCAGCTATGGTATTaGATAGCAATGTGCAATGAT +
Preference number: 4 (lower is better)
Translates to: SLLRCLGKITEEEEQEVLSQLWY*IAMCND
Trigger: ATCATTGCACATTGCTATTCAATACCATAGCTGACT...TAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCAGCGAAGTAGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR TCA 90 bp CGCTGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAATGCTTTTGACTTGCCAACTATaGAGAGTTTGCTTAACTTCA +
Preference number: 4 (lower is better)
Translates to: RCLGKITEEEEQEVLEMLLTCQL*RVCLTS
Trigger: TGAAGTTAAGCAAACTCTTCATAGTTGGCAAGTCAA...AAGCATTTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCAGCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR TCA 90 bp TCTCTACTTCGCTGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAATTCTTATGAATACCTaGCTCATGTCAGTGATTTGG +
Preference number: 4 (lower is better)
Translates to: SLLRCLGKITEEEEQEVLILMNT*LMSVIW
Trigger: CCAAATCACTGACATGAGTCAGGTATTCATAAGAAT...TAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCAGCGAAGTAGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR TCA 90 bp ATGACATATCTTTCCACATTCAACTACAGCACTTGGGCAGTCAACAGATCAAGTTCAATCCCTAGACTCTaGAGAAGCAAAAATGGGTTT +
Preference number: 4 (lower is better)
Translates to: MTYLSTFNYSTWAVNRSSSIPRL*RSKNGF
Trigger: AAACCCATTTTTGCTTCTTCAGAGTCTAGGGATTGA...ACTTGATCTGTTGACTGCCCAAGTGCTGTAGTTGAATGTGGAAAGATATGTCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR TCA 90 bp CGCTGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAATGCTTTCATTAAGCCAAAAGTaGATGTCAGAAGGCTTTTTC +
Preference number: 4 (lower is better)
Translates to: RCLGKITEEEEQEVLEMLSLSQK*MSEGFF
Trigger: GAAAAAGCCTTCTGACATTCACTTTTGGCTTAATGA...AAGCATTTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCAGCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000641900.1
CDS-3UTR GCA 90 bp ATTTCTCTACTTCGCTGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTAATTTCTCTACTTCGCTaGCTAGGTAAAATCACTGAA +
Preference number: 4 (lower is better)
Translates to: ISLLRCLGKITEEEEQEVISLLR*LGKITE
Trigger: TTCAGTGATTTTACCTAGGCAGCGAAGTAGAGAAAT...TACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCAGCGAAGTAGAGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641423.1
ENST00000641900.1
ENST00000641938.1
CDS-3UTR GCA 90 bp CTACTTCGCTGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAATTTCTCTACTTCGCTaGCTAGGTAAAATCACTGAA +
Preference number: 4 (lower is better)
Translates to: LLRCLGKITEEEEQEVLEISLLR*LGKITE
Trigger: TTCAGTGATTTTACCTAGGCAGCGAAGTAGAGAAAT...TTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCAGCGAAGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641423.1
ENST00000641900.1
ENST00000641938.1
CDS-3UTR GCA 90 bp AGTACCGTTATTCCCACAAATAGCCACAAAGGGGCAATGTTGACTTGCCAACTATTGGTATATTGCAAGTaGTCAAAACACATGAACTTG +
Preference number: 4 (lower is better)
Translates to: STVIPTNSHKGAMLTCQLLVYCK*SKHMNL
Trigger: CAAGTTCATGTGTTTTGAGCACTTGCAATATACCAA...TAGTTGGCAAGTCAACATTGCCCCTTTGTGGCTATTTGTGGGAATAACGGTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR GCA 90 bp CCAAGCCTGAAGGTACTAAGAGCCCCTTCCTGTAAGCCAATGGGTATAATTTTTATGGAGTTGACCAAATaGTTGAAAATATCACCTGAT +
Preference number: 4 (lower is better)
Translates to: PSLKVLRAPSCKPMGIIFMELTK*LKISPD
Trigger: ATCAGGTGATATTTTCAAGCATTTGGTCAACTCCAT...AAAAATTATACCCATTGGCTTACAGGAAGGGGCTCTTAGTACCTTCAGGCTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR GCA 90 bp GACACTATGACATATCTTTCCACATTCAACTACAGCACTTGGGCAGTCAACAGAATTGTGTTGGCCATTTaGATTGATCTACAGAAGTCT +
Preference number: 4 (lower is better)
Translates to: DTMTYLSTFNYSTWAVNRIVLAI*IDLQKS
Trigger: AGACTTCTGTAGATCAATGCAAATGGCCAACACAAT...TCTGTTGACTGCCCAAGTGCTGTAGTTGAATGTGGAAAGATATGTCATAGTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR GCA 90 bp GACATTTCTCTACTTCGCTGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGCATGTTTTAACATTTTaGTATGGGAACTTCACAGCA +
Preference number: 4 (lower is better)
Translates to: DISLLRCLGKITEEEEQEHVLTF*YGNFTA
Trigger: TGCTGTGAAGTTCCCATAGCAAAATGTTAAAACATG...CTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCAGCGAAGTAGAGAAATGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR GCA 90 bp ATGACATATCTTTCCACATTCAACTACAGCACTTGGGCAGTCAACAGATCAAGTTTTATTTCTTTCTCTTaGCTGATTGCTCTGGCTAGG +
Preference number: 4 (lower is better)
Translates to: MTYLSTFNYSTWAVNRSSFISFS*LIALAR
Trigger: CCTAGCCAGAGCAATCAGGCAAGAGAAAGAAATAAA...ACTTGATCTGTTGACTGCCCAAGTGCTGTAGTTGAATGTGGAAAGATATGTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641900.1
CDS-3UTR GCA 90 bp ATTTCTCTACTTCGCTGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTAAGCTGTGAATGGGATTaGCTTTCTAATTTGAATCTC +
Preference number: 4 (lower is better)
Translates to: ISLLRCLGKITEEEEQEVSCEWD*LSNLNL
Trigger: GAGATTCAAATTAGAAAGGCAATCCCATTCACAGCT...TACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCAGCGAAGTAGAGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641900.1
CDS-3UTR CCA 90 bp TGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAATGCTTTACGTAAAGGAAGGAATCTaGTTCAGTAATGAAGGGAGC +
Preference number: 4 (lower is better)
Translates to: CLGKITEEEEQEVLEMLYVKEGI*FSNEGS
Trigger: GCTCCCTTCATTACTGAACCAGATTCCTTCCTTTAC...GTAAAGCATTTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CCA 90 bp TGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAATGCTTTACAGTCTCCAGATTGGTTaGTTGGTTGATTGGTTTTGG +
Preference number: 4 (lower is better)
Translates to: CLGKITEEEEQEVLEMLYSLQIG*LVDWFW
Trigger: CCAAAACCAATCAACCAACCAACCAATCTGGAGACT...GTAAAGCATTTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CCA 90 bp CCAAGCCTGAAGGTACTAAGAGCCCCTTCCTGTAAGCCAATGGGTATAATTTTTTTAAGATCTGAGTTTTaGCCAAATAACATAGACTCC +
Preference number: 4 (lower is better)
Translates to: PSLKVLRAPSCKPMGIIFLRSEF*PNNIDS
Trigger: GGAGTCTATGTTATTTGGCCAAAACTCAGATCTTAA...AAAAATTATACCCATTGGCTTACAGGAAGGGGCTCTTAGTACCTTCAGGCTTGG
40% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CCA 90 bp GACATTTCTCTACTTCGCTGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGAATAAAGTATCAGGATaGCTAGGCACTAAAAAGCTT +
Preference number: 4 (lower is better)
Translates to: DISLLRCLGKITEEEEQENKVSG*LGTKKL
Trigger: AAGCTTTTTAGTGCCTAGCCATCCTGATACTTTATT...CTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCAGCGAAGTAGAGAAATGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CCA 90 bp ATGACATATCTTTCCACATTCAACTACAGCACTTGGGCAGTCAACAGATCAAGTCCAGGAATGCAAAAATaGTTCAACGCATGCAAATCA +
Preference number: 4 (lower is better)
Translates to: MTYLSTFNYSTWAVNRSSPGMQK*FNACKS
Trigger: TGATTTGCATGCGTTGAACCATTTTTGCATTCCTGG...ACTTGATCTGTTGACTGCCCAAGTGCTGTAGTTGAATGTGGAAAGATATGTCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641900.1
3UTR CAA 72 bp GGTCAAAGGAAAGCAAAGGCTGGTCTTGAGCTTCAATaGCAATTGATGAGGCATTTCAACTATGTAGAAAGA +
Preference number: 4 (lower is better)
Translates to: GQRKAKAGLELQ*QLMRHFNYVER
Trigger: TCTTTCTACATAGTTGAAATGCCTCATCAATTGCAATTGAAGCTCAAGACCAGCCTTTGCTTTCCTTTGACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
3UTR CAA 72 bp CAGAGAGCCAACTTTTCAAGTATGTGGTTTATCCATTaGTTACGTTTAGGACTCTACTACTGGGGAACTAGA +
Preference number: 4 (lower is better)
Translates to: QRANFSSMWFIH*LRLGLYYWGTR
Trigger: TCTAGTTCCCCAGTAGTAGAGTCCTAAACGTAACAAATGGATAAACCACATACTTGAAAAGTTGGCTCTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
3UTR CAA 72 bp CAAAGGGGCAATGTTGACTTGCCAACTATGAAGAGTTaGCTTAACTTCAGACGTTGCTGTTTAAGTTCTACA +
Preference number: 4 (lower is better)
Translates to: QRGNVDLPTMKS*LNFRRCCLSST
Trigger: TGTAGAACTTAAACAGCAACGTCTGAAGTTAAGCAAACTCTTCATAGTTGGCAAGTCAACATTGCCCCTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
3UTR CAA 72 bp GTGAATTCAAGTAAAAATGAGACCTTGATCCCTCTCTaGGCTCTATCCACAGGCAAACCAGCATTTACTTTT +
Preference number: 4 (lower is better)
Translates to: VNSSKNETLIPL*ALSTGKPAFTF
Trigger: AAAAGTAAATGCTGGTTTGCCTGTGGATAGAGCCAAGAGAGGGATCAAGGTCTCATTTTTACTTGAATTCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641900.1
CDS-3UTR TCA 90 bp AATGAAGGGAGCCTCAGTGCATGCAATAAACACTCACTAACTGACATTTCTCTAAGAAACCTGACACTATaGCATATCTTTCCACATTCA +
Preference number: 4 (lower is better)
Translates to: NEGSLSACNKHSLTDISLRNLTL*HIFPHS
Trigger: TGAATGTGGAAAGATATGTCATAGTGTCAGGTTTCT...TAGAGAAATGTCAGTTAGTGAGTGTTTATTGCATGCACTGAGGCTCCCTTCATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR TCA 90 bp ATGACATATCTTTCCACATTCAACTACAGCACTTGGGCAGTCAACAGATCAAGTTATGTACACCCAGTTTaGGTCAAGCATCTCATAATT +
Preference number: 4 (lower is better)
Translates to: MTYLSTFNYSTWAVNRSSYVHPV*VKHLII
Trigger: AATTATGAGATGCTTGACTCAAACTGGGTGTACATA...ACTTGATCTGTTGACTGCCCAAGTGCTGTAGTTGAATGTGGAAAGATATGTCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR TCA 90 bp ATGACATATCTTTCCACATTCAACTACAGCACTTGGGCAGTCAACAGATCAAGTCCTTTATCATCTGTATaGGGATTTACTTCAAAGCCT +
Preference number: 4 (lower is better)
Translates to: MTYLSTFNYSTWAVNRSSPLSSV*GFTSKP
Trigger: AGGCTTTGAAGTAAATCCTCATACAGATGATAAAGG...ACTTGATCTGTTGACTGCCCAAGTGCTGTAGTTGAATGTGGAAAGATATGTCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR TCA 90 bp TGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAATGCTTTACGCTATAAACTTTCTCTaGTGTCTCAGAACTCTCACT +
Preference number: 4 (lower is better)
Translates to: CLGKITEEEEQEVLEMLYAINFL*CLRTLT
Trigger: AGTGAGAGTTCTGAGACATCAGAGAAAGTTTATAGC...GTAAAGCATTTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR TCA 90 bp CTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAATGCTTTACATAGAGGAGTCTGGCCGATaGAATGATAGAGAAAGTGAT +
Preference number: 4 (lower is better)
Translates to: LGKITEEEEQEVLEMLYIEESGR*NDRESD
Trigger: ATCACTTTCTCTATCATTTCATCGGCCAGACTCCTC...TATGTAAAGCATTTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR TCA 90 bp TGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAATGCTTTACACAGAATATCACTGGTaGAAGAGAAATCACAATGGG +
Preference number: 4 (lower is better)
Translates to: CLGKITEEEEQEVLEMLYTEYHW*KRNHNG
Trigger: CCCATTGTGATTTCTCTTTCACCAGTGATATTCTGT...GTAAAGCATTTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR GCA 90 bp ATGACATATCTTTCCACATTCAACTACAGCACTTGGGCAGTCAACAGATCAAGTATTGTGTTGGCCATTTaGATTGATCTACAGAAGTCT +
Preference number: 4 (lower is better)
Translates to: MTYLSTFNYSTWAVNRSSIVLAI*IDLQKS
Trigger: AGACTTCTGTAGATCAATGCAAATGGCCAACACAAT...ACTTGATCTGTTGACTGCCCAAGTGCTGTAGTTGAATGTGGAAAGATATGTCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR GCA 90 bp TGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAATGCTTTACATCCACTCAAGACAGTaGTTGAAAACCTTTACAGAG +
Preference number: 4 (lower is better)
Translates to: CLGKITEEEEQEVLEMLYIHSRQ*LKTFTE
Trigger: CTCTGTAAAGGTTTTCAAGCACTGTCTTGAGTGGAT...GTAAAGCATTTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR GCA 90 bp TGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAATGCTTTACTCTCAGAACTCTCACTaGCTAGAATATACACCAAAG +
Preference number: 4 (lower is better)
Translates to: CLGKITEEEEQEVLEMLYSQNSH*LEYTPK
Trigger: CTTTGGTGTATATTCTAGGCAGTGAGAGTTCTGAGA...GTAAAGCATTTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CCA 90 bp CACTCACTAACTGACATTTCTCTACTTCGCTGCCTAGGTAAAATCACTGAAGAGTTAAGATCTGAGTTTTaGCCAAATAACATAGACTCC +
Preference number: 4 (lower is better)
Translates to: HSLTDISLLRCLGKITEELRSEF*PNNIDS
Trigger: GGAGTCTATGTTATTTGGCCAAAACTCAGATCTTAA...CTCTTCAGTGATTTTACCTAGGCAGCGAAGTAGAGAAATGTCAGTTAGTGAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CCA 90 bp CTTCGCTGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAATGAATAAAGTATCAGGATaGCTAGGCACTAAAAAGCTT +
Preference number: 4 (lower is better)
Translates to: LRCLGKITEEEEQEVLEMNKVSG*LGTKKL
Trigger: AAGCTTTTTAGTGCCTAGCCATCCTGATACTTTATT...CATTTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCAGCGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR TCA 90 bp TGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAATGCTTTACCTTCTAATACTATGTTaGACAGAAGTGGTGAGAGAA +
Preference number: 4 (lower is better)
Translates to: CLGKITEEEEQEVLEMLYLLILC*TEVVRE
Trigger: TTCTCTCACCACTTCTGTTCAACATAGTATTAGAAG...GTAAAGCATTTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641900.1
CDS-3UTR GCA 90 bp AATGAAGGGAGCCTCAGTGCATGCAATAAACACTCACTAACTGACATTTCTCTATTGGTATATTGCAAGTaGTCAAAACACATGAACTTG +
Preference number: 4 (lower is better)
Translates to: NEGSLSACNKHSLTDISLLVYCK*SKHMNL
Trigger: CAAGTTCATGTGTTTTGAGCACTTGCAATATACCAA...TAGAGAAATGTCAGTTAGTGAGTGTTTATTGCATGCACTGAGGCTCCCTTCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CCA 90 bp CTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAATGCTTTACATACCTGTTTTATCTCTTTaGTCCGAACCCCATACACAA +
Preference number: 4 (lower is better)
Translates to: LGKITEEEEQEVLEMLYIPVLSL*SEPHTQ
Trigger: TTGTGTATGGGGTTCGGACCAAAGAGATAAAACAGG...TATGTAAAGCATTTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641423.1
ENST00000641900.1
ENST00000641938.1
CDS-3UTR CCA 90 bp TGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAATGCTTTACTCCAGATTGGTTGGTTaGTTGATTGGTTTTGGTTTT +
Preference number: 4 (lower is better)
Translates to: CLGKITEEEEQEVLEMLYSRLVG*LIGFGF
Trigger: AAAACCAAAACCAATCAACCAACCAACCAATCTGGA...GTAAAGCATTTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CCA 90 bp CTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAATGCTTTACATAAGCCCACACCAGCATTaGGTTACAGTTACTTTATCT +
Preference number: 4 (lower is better)
Translates to: LGKITEEEEQEVLEMLYISPHQH*VTVTLS
Trigger: AGATAAAGTAACTGTAACCCAATGCTGGTGTGGGCT...TATGTAAAGCATTTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CCA 90 bp ATGACATATCTTTCCACATTCAACTACAGCACTTGGGCAGTCAACAGATCAAGTCTGAAGAAGCAAAAATaGGTTTATGTAGCAAAATGC +
Preference number: 4 (lower is better)
Translates to: MTYLSTFNYSTWAVNRSSLKKQK*VYVAKC
Trigger: GCATTTTGCTACATAAACCCATTTTTGCTTCTTCAG...ACTTGATCTGTTGACTGCCCAAGTGCTGTAGTTGAATGTGGAAAGATATGTCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
3UTR CAA 72 bp GCACTCCTGGAAAGACGAATGGAGTTGACCAAATGCTaGAAAATATCACCTGATTACAGATGTATTATATTC +
Preference number: 4 (lower is better)
Translates to: ALLERRMELTKC*KISPDYRCIIF
Trigger: GAATATAATACATCTGTAATCAGGTGATATTTTCAAGCATTTGGTCAACTCCATTCGTCTTTCCAGGAGTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR GCA 90 bp TGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAATGCTTTACCATGTTTTAACATTTTaGTATGGGAACTTCACAGCA +
Preference number: 4 (lower is better)
Translates to: CLGKITEEEEQEVLEMLYHVLTF*YGNFTA
Trigger: TGCTGTGAAGTTCCCATAGCAAAATGTTAAAACATG...GTAAAGCATTTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR GCA 90 bp CTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAATGCTTTACATAATCATTTTGCTCAGTTaGCTCATCTGCAAAAATGGG +
Preference number: 4 (lower is better)
Translates to: LGKITEEEEQEVLEMLYIIILLS*LICKNG
Trigger: CCCATTTTTGCAGATGAGGCAACTGAGCAAAATGAT...TATGTAAAGCATTTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CCA 90 bp TGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAATGCTTTACTTAGCAACTGTGAAATaGAGAGAAGTTCTATTAGAG +
Preference number: 4 (lower is better)
Translates to: CLGKITEEEEQEVLEMLYLATVK*REVLLE
Trigger: CTCTAATAGAACTTCTCTCCATTTCACAGTTGCTAA...GTAAAGCATTTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CCA 90 bp TGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAATGCTTTACAGAAATAGGTTTAATTaGACTTACAGTTCCACATGG +
Preference number: 4 (lower is better)
Translates to: CLGKITEEEEQEVLEMLYRNRFN*TYSSTW
Trigger: CCATGTGGAACTGTAAGTCCAATTAAACCTATTTCT...GTAAAGCATTTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641900.1
CDS-3UTR TCA 90 bp CTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAATGCTTTACATATTGACTTGCCAACTATaGAGAGTTTGCTTAACTTCA +
Preference number: 4 (lower is better)
Translates to: LGKITEEEEQEVLEMLYILTCQL*RVCLTS
Trigger: TGAAGTTAAGCAAACTCTTCATAGTTGGCAAGTCAA...TATGTAAAGCATTTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR GCA 90 bp CTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAATGCTTTACATAAATGCTTCCATCTTTTaGCCATTTTGGAGGTCAAAA +
Preference number: 4 (lower is better)
Translates to: LGKITEEEEQEVLEMLYINASIF*PFWRSK
Trigger: TTTTGACCTCCAAAATGGGCAAAAGATGGAAGCATT...TATGTAAAGCATTTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000641900.1
3UTR CAA 72 bp TTTATCTTGGAAGTGGAATTGATTCTAGTCTCCAGATaGGTTGGTTGGTTGATTGGTTTTGGTTTTTGTTTA +
Preference number: 4 (lower is better)
Translates to: FILEVELILVSR*VGWLIGFGFCL
Trigger: TAAACAAAAACCAAAACCAATCAACCAACCAACCAATCTGGAGACTAGAATCAATTCCACTTCCAAGATAAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR GCA 90 bp CTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAATGCTTTACATAATGGAGTTGACCAAATaGTTGAAAATATCACCTGAT +
Preference number: 4 (lower is better)
Translates to: LGKITEEEEQEVLEMLYIMELTK*LKISPD
Trigger: ATCAGGTGATATTTTCAAGCATTTGGTCAACTCCAT...TATGTAAAGCATTTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CCA 90 bp CTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAATGCTTTACATATTAGCAACTGTGAAATaGAGAGAAGTTCTATTAGAG +
Preference number: 4 (lower is better)
Translates to: LGKITEEEEQEVLEMLYILATVK*REVLLE
Trigger: CTCTAATAGAACTTCTCTCCATTTCACAGTTGCTAA...TATGTAAAGCATTTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CCA 90 bp CTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAATGCTTTACATACTGAAGAAGCAAAAATaGGTTTATGTAGCAAAATGC +
Preference number: 4 (lower is better)
Translates to: LGKITEEEEQEVLEMLYILKKQK*VYVAKC
Trigger: GCATTTTGCTACATAAACCCATTTTTGCTTCTTCAG...TATGTAAAGCATTTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CAA 90 bp CGCTGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAATGCTTGGGACAGTGGAGCTGTaGCTGGGTGACGCCATAGGC +
Preference number: 5 (lower is better)
Translates to: RCLGKITEEEEQEVLEMLGTVEL*LGDAIG
Trigger: GCCTATGGCGTCACCCAGCAACAGCTCCACTGTCCC...AAGCATTTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641423.1
ENST00000641900.1
ENST00000641938.1
CDS-3UTR CAA 90 bp TGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAATGCTTTACGGGACAGTGGAGCTGTaGCTGGGTGACGCCATAGGC +
Preference number: 5 (lower is better)
Translates to: CLGKITEEEEQEVLEMLYGTVEL*LGDAIG
Trigger: GCCTATGGCGTCACCCAGCAACAGCTCCACTGTCCC...GTAAAGCATTTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641423.1
ENST00000641900.1
ENST00000641938.1
CDS-3UTR CAA 90 bp TGTTGTCCCACTGCTGTCTTGGTCCCTCCATCCTTTACAAATCCCTACAACAAATGCCCAGCAGAAGTTTaGTCAAGCAAGACTCTGCCT +
Preference number: 5 (lower is better)
Translates to: CCPTAVLVPPSFTNPYNKCPAEV*SSKTLP
Trigger: AGGCAGAGTCTTGCTTGACAAAACTTCTGCTGGGCA...TTTGTTGTAGGGATTTGTAAAGGATGGAGGGACCAAGACAGCAGTGGGACAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CAA 90 bp GACATTTCTCTACTTCGCTGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGTGTCCCACTGCTGTCTaGGTCCCTCCATCCTTTACA +
Preference number: 5 (lower is better)
Translates to: DISLLRCLGKITEEEEQECPTAV*VPPSFT
Trigger: TGTAAAGGATGGAGGGACCAAGACAGCAGTGGGACA...CTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCAGCGAAGTAGAGAAATGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CAA 90 bp TGTTGTCCCACTGCTGTCTTGGTCCCTCCATCCTTTACAAATCCCTACAACAAACTGTCTGTTCCTGTCTaGTCAGTATTCCTTAGCAGC +
Preference number: 5 (lower is better)
Translates to: CCPTAVLVPPSFTNPYNKLSVPV*SVFLSS
Trigger: GCTGCTAAGGAATACTGACAAGACAGGAACAGACAG...TTTGTTGTAGGGATTTGTAAAGGATGGAGGGACCAAGACAGCAGTGGGACAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CAA 90 bp GACATTTCTCTACTTCGCTGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGCATGGAGAGGGACACTaGCTCTTTCTGTCTGTTCCT +
Preference number: 5 (lower is better)
Translates to: DISLLRCLGKITEEEEQEHGEGH*LFLSVP
Trigger: AGGAACAGACAGAAAGAGCAAGTGTCCCTCTCCATG...CTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCAGCGAAGTAGAGAAATGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CAA 90 bp TGTTATAGGTGCTCCTCAGTAGTCACAAGCTTTCAGACCCACATAAGATTGGAGGAGTTCATTCTGGGCTaGCTTCCGGGTGAAATCATG +
Preference number: 5 (lower is better)
Translates to: CYRCSSVVTSFQTHIRLEEFILG*LPGEIM
Trigger: CATGATTTCACCCGGAAGCAAGCCCAGAATGAACTC...CTCCAATCTTATGTGGGTCTGAAAGCTTGTGACTACTGAGGAGCACCTATAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CAA 90 bp CTTCGCTGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAATGTGTCCCACTGCTGTCTaGGTCCCTCCATCCTTTACA +
Preference number: 5 (lower is better)
Translates to: LRCLGKITEEEEQEVLEMCPTAV*VPPSFT
Trigger: TGTAAAGGATGGAGGGACCAAGACAGCAGTGGGACA...CATTTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCAGCGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CAA 90 bp GACACTATGACATATCTTTCCACATTCAACTACAGCACTTGGGCAGTCAACAGAAACTTCACAGCAGAGTaGGGTCTGCCCTTCATGGTC +
Preference number: 5 (lower is better)
Translates to: DTMTYLSTFNYSTWAVNRNFTAE*GLPFMV
Trigger: GACCATGAAGGGCAGACCCAACTCTGCTGTGAAGTT...TCTGTTGACTGCCCAAGTGCTGTAGTTGAATGTGGAAAGATATGTCATAGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CAA 90 bp TGTTGTCCCACTGCTGTCTTGGTCCCTCCATCCTTTACAAATCCCTACAACAAAGAAGGCATCTTTGCCTaGTGCCAGTTTTATAGGGGA +
Preference number: 5 (lower is better)
Translates to: CCPTAVLVPPSFTNPYNKEGIFA*CQFYRG
Trigger: TCCCCTATAAAACTGGCACAAGGCAAAGATGCCTTC...TTTGTTGTAGGGATTTGTAAAGGATGGAGGGACCAAGACAGCAGTGGGACAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641900.1
CDS-3UTR CAA 90 bp TGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAATGCTTTACCAGCTGGAGGAGGTTTaGGGCCTAGACTGTGGGGTT +
Preference number: 5 (lower is better)
Translates to: CLGKITEEEEQEVLEMLYQLEEV*GLDCGV
Trigger: AACCCCACAGTCTAGGCCCAAAACCTCCTCCAGCTG...GTAAAGCATTTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641900.1
CDS-3UTR CAA 90 bp CTTCGCTGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAATGGGAGCAACTTACATCTaGCATGGGTGGTGGGAGGAA +
Preference number: 5 (lower is better)
Translates to: LRCLGKITEEEEQEVLEMGATYI*HGWWEE
Trigger: TTCCTCCCACCACCCATGCAAGATGTAAGTTGCTCC...CATTTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCAGCGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641900.1
CDS-3UTR CAA 90 bp AGTACCGTTATTCCCACAAATAGCCACAAAGGGGCAATGTTGACTTGCCAACTACCCTGTTTTATCTCTTaGGTCCGAACCCCATACACA +
Preference number: 5 (lower is better)
Translates to: STVIPTNSHKGAMLTCQLPCFIS*VRTPYT
Trigger: TGTGTATGGGGTTCGGACCAAAGAGATAAAACAGGG...TAGTTGGCAAGTCAACATTGCCCCTTTGTGGCTATTTGTGGGAATAACGGTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CAA 90 bp CGCTGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAATGCTTCCTGCACTAGGGGACTaGATTCTGACTCTAATTCCC +
Preference number: 5 (lower is better)
Translates to: RCLGKITEEEEQEVLEMLPALGD*ILTLIP
Trigger: GGGAATTAGAGTCAGAATCAAGTCCCCTAGTGCAGG...AAGCATTTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCAGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CAA 90 bp GACATTTCTCTACTTCGCTGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGCACAATGTGGGGCAGTaGATCTTACTCCTCTTACCA +
Preference number: 5 (lower is better)
Translates to: DISLLRCLGKITEEEEQEHNVGQ*ILLLLP
Trigger: TGGTAAGAGGAGTAAGATCAACTGCCCCACATTGTG...CTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCAGCGAAGTAGAGAAATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CAA 90 bp TGTTATAGGTGCTCCTCAGTAGTCACAAGCTTTCAGACCCACATAAGATTGGAGGAGCCCACACCAGCATaGGGTTACAGTTACTTTATC +
Preference number: 5 (lower is better)
Translates to: CYRCSSVVTSFQTHIRLEEPTPA*GYSYFI
Trigger: GATAAAGTAACTGTAACCCAATGCTGGTGTGGGCTC...CTCCAATCTTATGTGGGTCTGAAAGCTTGTGACTACTGAGGAGCACCTATAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CAA 90 bp GACACTATGACATATCTTTCCACATTCAACTACAGCACTTGGGCAGTCAACAGAGAGTTCATTCTGGGCTaGCTTCCGGGTGAAATCATG +
Preference number: 5 (lower is better)
Translates to: DTMTYLSTFNYSTWAVNREFILG*LPGEIM
Trigger: CATGATTTCACCCGGAAGCAAGCCCAGAATGAACTC...TCTGTTGACTGCCCAAGTGCTGTAGTTGAATGTGGAAAGATATGTCATAGTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CAA 90 bp CGCTGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAATGCTTCCCTGTTTTATCTCTTaGGTCCGAACCCCATACACA +
Preference number: 5 (lower is better)
Translates to: RCLGKITEEEEQEVLEMLPCFIS*VRTPYT
Trigger: TGTGTATGGGGTTCGGACCAAAGAGATAAAACAGGG...AAGCATTTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCAGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641423.1
ENST00000641900.1
ENST00000641938.1
CDS-3UTR CAA 90 bp CCAAGCCTGAAGGTACTAAGAGCCCCTTCCTGTAAGCCAATGGGTATAATTTTTATTCAACTACAGCACTaGGGCAGTCAACAGATCAAG +
Preference number: 5 (lower is better)
Translates to: PSLKVLRAPSCKPMGIIFIQLQH*GSQQIK
Trigger: CTTGATCTGTTGACTGCCCAAGTGCTGTAGTTGAAT...AAAAATTATACCCATTGGCTTACAGGAAGGGGCTCTTAGTACCTTCAGGCTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CAA 90 bp TGTTGTCCCACTGCTGTCTTGGTCCCTCCATCCTTTACAAATCCCTACAACAAACTCCAGATTGGTTGGTaGGTTGATTGGTTTTGGTTT +
Preference number: 5 (lower is better)
Translates to: CCPTAVLVPPSFTNPYNKLQIGW*VDWFWF
Trigger: AAACCAAAACCAATCAACCAACCAACCAATCTGGAG...TTTGTTGTAGGGATTTGTAAAGGATGGAGGGACCAAGACAGCAGTGGGACAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CAA 90 bp CTTCGCTGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAATGCTGTCTGTTCCTGTCTaGTCAGTATTCCTTAGCAGC +
Preference number: 5 (lower is better)
Translates to: LRCLGKITEEEEQEVLEMLSVPV*SVFLSS
Trigger: GCTGCTAAGGAATACTGACAAGACAGGAACAGACAG...CATTTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCAGCGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CAA 90 bp ATGACATATCTTTCCACATTCAACTACAGCACTTGGGCAGTCAACAGATCAAGTCATGGAGAGGGACACTaGCTCTTTCTGTCTGTTCCT +
Preference number: 5 (lower is better)
Translates to: MTYLSTFNYSTWAVNRSSHGEGH*LFLSVP
Trigger: AGGAACAGACAGAAAGAGCAAGTGTCCCTCTCCATG...ACTTGATCTGTTGACTGCCCAAGTGCTGTAGTTGAATGTGGAAAGATATGTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CAA 90 bp AATGAAGGGAGCCTCAGTGCATGCAATAAACACTCACTAACTGACATTTCTCTACAGACCCACATAAGATaGGAGCTGCGCCAGTTACTA +
Preference number: 5 (lower is better)
Translates to: NEGSLSACNKHSLTDISLQTHIR*ELRQLL
Trigger: TAGTAACTGGCGCAGCTCCAATCTTATGTGGGTCTG...TAGAGAAATGTCAGTTAGTGAGTGTTTATTGCATGCACTGAGGCTCCCTTCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CAA 90 bp ATGACATATCTTTCCACATTCAACTACAGCACTTGGGCAGTCAACAGATCAAGTCCTGCACTAGGGGACTaGATTCTGACTCTAATTCCC +
Preference number: 5 (lower is better)
Translates to: MTYLSTFNYSTWAVNRSSPALGD*ILTLIP
Trigger: GGGAATTAGAGTCAGAATCAAGTCCCCTAGTGCAGG...ACTTGATCTGTTGACTGCCCAAGTGCTGTAGTTGAATGTGGAAAGATATGTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CAA 90 bp CGCTGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAATGCTTCACAATGTGGGGCAGTaGATCTTACTCCTCTTACCA +
Preference number: 5 (lower is better)
Translates to: RCLGKITEEEEQEVLEMLHNVGQ*ILLLLP
Trigger: TGGTAAGAGGAGTAAGATCAACTGCCCCACATTGTG...AAGCATTTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCAGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CAA 90 bp TGTTGTCCCACTGCTGTCTTGGTCCCTCCATCCTTTACAAATCCCTACAACAAATGTTGGCCATTTGCATaGATCTACAGAAGTCTGGTT +
Preference number: 5 (lower is better)
Translates to: CCPTAVLVPPSFTNPYNKCWPFA*IYRSLV
Trigger: AACCAGACTTCTGTAGATCAATGCAAATGGCCAACA...TTTGTTGTAGGGATTTGTAAAGGATGGAGGGACCAAGACAGCAGTGGGACAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CAA 90 bp TGTTATAGGTGCTCCTCAGTAGTCACAAGCTTTCAGACCCACATAAGATTGGAGAGGGGCAATGTTGACTaGCCAACTATGAAGAGTTTG +
Preference number: 5 (lower is better)
Translates to: CYRCSSVVTSFQTHIRLERGNVD*PTMKSL
Trigger: CAAACTCTTCATAGTTGGCAAGTCAACATTGCCCCT...CTCCAATCTTATGTGGGTCTGAAAGCTTGTGACTACTGAGGAGCACCTATAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CAA 90 bp CACTCACTAACTGACATTTCTCTACTTCGCTGCCTAGGTAAAATCACTGAAGAGGGAAAAGAGAGGAGCTaGTGCAGGGAAACTCTAGTT +
Preference number: 5 (lower is better)
Translates to: HSLTDISLLRCLGKITEEGKERS*CRETLV
Trigger: AACTAGAGTTTCCCTGCACAAGCTCCTCTCTTTTCC...CTCTTCAGTGATTTTACCTAGGCAGCGAAGTAGAGAAATGTCAGTTAGTGAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641900.1
CDS-3UTR CAA 90 bp TGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAATGCTTTACTGCCCAGCAGAAGTTTaGTCAAGCAAGACTCTGCCT +
Preference number: 5 (lower is better)
Translates to: CLGKITEEEEQEVLEMLYCPAEV*SSKTLP
Trigger: AGGCAGAGTCTTGCTTGACAAAACTTCTGCTGGGCA...GTAAAGCATTTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CAA 90 bp CTACTTCGCTGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAATTCAACTACAGCACTaGGGCAGTCAACAGATCAAG +
Preference number: 5 (lower is better)
Translates to: LLRCLGKITEEEEQEVLEIQLQH*GSQQIK
Trigger: CTTGATCTGTTGACTGCCCAAGTGCTGTAGTTGAAT...TTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCAGCGAAGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CAA 90 bp AGTACCGTTATTCCCACAAATAGCCACAAAGGGGCAATGTTGACTTGCCAACTAATTCTAGTCTCCAGATaGGTTGGTTGGTTGATTGGT +
Preference number: 5 (lower is better)
Translates to: STVIPTNSHKGAMLTCQLILVSR*VGWLIG
Trigger: ACCAATCAACCAACCAACCAATCTGGAGACTAGAAT...TAGTTGGCAAGTCAACATTGCCCCTTTGTGGCTATTTGTGGGAATAACGGTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CAA 90 bp TGTTGTCCCACTGCTGTCTTGGTCCCTCCATCCTTTACAAATCCCTACAACAAAATCTTGGAAGTGGAATaGATTCTAGTCTCCAGATTG +
Preference number: 5 (lower is better)
Translates to: CCPTAVLVPPSFTNPYNKILEVE*ILVSRL
Trigger: CAATCTGGAGACTAGAATCAATTCCACTTCCAAGAT...TTTGTTGTAGGGATTTGTAAAGGATGGAGGGACCAAGACAGCAGTGGGACAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CAA 90 bp CTTCGCTGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAATGATGACAAATACTGAGTaGAACCTGTGGCTCTGGCTT +
Preference number: 5 (lower is better)
Translates to: LRCLGKITEEEEQEVLEMMTNTE*NLWLWL
Trigger: AAGCCAGAGCCACAGGTTCAACTCAGTATTTGTCAT...CATTTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCAGCGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CAA 90 bp CTTCGCTGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAATGCACTCAAGACAGTGCTaGAAAACCTTTACAGAGAGG +
Preference number: 5 (lower is better)
Translates to: LRCLGKITEEEEQEVLEMHSRQC*KTFTER
Trigger: CCTCTCTGTAAAGGTTTTCAAGCACTGTCTTGAGTG...CATTTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCAGCGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CAA 90 bp CTACTTCGCTGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAAGGGGCAATGTTGACTaGCCAACTATGAAGAGTTTG +
Preference number: 5 (lower is better)
Translates to: LLRCLGKITEEEEQEVLERGNVD*PTMKSL
Trigger: CAAACTCTTCATAGTTGGCAAGTCAACATTGCCCCT...TTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCAGCGAAGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CAA 90 bp TGTTATAGGTGCTCCTCAGTAGTCACAAGCTTTCAGACCCACATAAGATTGGAGCTTCGAGGGGGTTTATaGCCAAAGAAACATGAACTT +
Preference number: 5 (lower is better)
Translates to: CYRCSSVVTSFQTHIRLELRGGL*PKKHEL
Trigger: AAGTTCATGTTTCTTTGGCAATAAACCCCCTCGAAG...CTCCAATCTTATGTGGGTCTGAAAGCTTGTGACTACTGAGGAGCACCTATAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641900.1
CDS-3UTR CAA 90 bp GACACTATGACATATCTTTCCACATTCAACTACAGCACTTGGGCAGTCAACAGACTCCAGATTGGTTGGTaGGTTGATTGGTTTTGGTTT +
Preference number: 5 (lower is better)
Translates to: DTMTYLSTFNYSTWAVNRLQIGW*VDWFWF
Trigger: AAACCAAAACCAATCAACCAACCAACCAATCTGGAG...TCTGTTGACTGCCCAAGTGCTGTAGTTGAATGTGGAAAGATATGTCATAGTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CAA 90 bp GACACTATGACATATCTTTCCACATTCAACTACAGCACTTGGGCAGTCAACAGAAGAAACATTAGAAGGTaGAAACATGGAGAGGGACAC +
Preference number: 5 (lower is better)
Translates to: DTMTYLSTFNYSTWAVNRRNIRR*KHGEGH
Trigger: GTGTCCCTCTCCATGTTTCAACCTTCTAATGTTTCT...TCTGTTGACTGCCCAAGTGCTGTAGTTGAATGTGGAAAGATATGTCATAGTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CAA 90 bp TGTTGTCCCACTGCTGTCTTGGTCCCTCCATCCTTTACAAATCCCTACAACAAATTTTCTTTCCTACTGTaGTTGAGTGACTGGAAGAAA +
Preference number: 5 (lower is better)
Translates to: CCPTAVLVPPSFTNPYNKFSFLL*LSDWKK
Trigger: TTTCTTCCAGTCACTCAACAACAGTAGGAAAGAAAA...TTTGTTGTAGGGATTTGTAAAGGATGGAGGGACCAAGACAGCAGTGGGACAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CAA 90 bp ATGACATATCTTTCCACATTCAACTACAGCACTTGGGCAGTCAACAGATCAAGTAACATAGACTCCTCTTaGAGTTCATTCTGGGCTTGC +
Preference number: 5 (lower is better)
Translates to: MTYLSTFNYSTWAVNRSSNIDSS*SSFWAC
Trigger: GCAAGCCCAGAATGAACTCAAAGAGGAGTCTATGTT...ACTTGATCTGTTGACTGCCCAAGTGCTGTAGTTGAATGTGGAAAGATATGTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CAA 90 bp CTACTTCGCTGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAATGTTGGCCATTTGCATaGATCTACAGAAGTCTGGTT +
Preference number: 5 (lower is better)
Translates to: LLRCLGKITEEEEQEVLECWPFA*IYRSLV
Trigger: AACCAGACTTCTGTAGATCAATGCAAATGGCCAACA...TTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCAGCGAAGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CAA 90 bp TGTTGTCCCACTGCTGTCTTGGTCCCTCCATCCTTTACAAATCCCTACAACAAACATCTCATAATTGTGTaGGCCATTTGCATTGATCTA +
Preference number: 5 (lower is better)
Translates to: CCPTAVLVPPSFTNPYNKHLIIV*AICIDL
Trigger: TAGATCAATGCAAATGGCCAACACAATTATGAGATG...TTTGTTGTAGGGATTTGTAAAGGATGGAGGGACCAAGACAGCAGTGGGACAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CAA 90 bp TGTTATAGGTGCTCCTCAGTAGTCACAAGCTTTCAGACCCACATAAGATTGGAGCTATGTACACCCAGTTaGAGTCAAGCATCTCATAAT +
Preference number: 5 (lower is better)
Translates to: CYRCSSVVTSFQTHIRLELCTPS*SQASHN
Trigger: ATTATGAGATGCTTGACTCAAACTGGGTGTACATAG...CTCCAATCTTATGTGGGTCTGAAAGCTTGTGACTACTGAGGAGCACCTATAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CAA 90 bp AGTACCGTTATTCCCACAAATAGCCACAAAGGGGCAATGTTGACTTGCCAACTACTATGTACACCCAGTTaGAGTCAAGCATCTCATAAT +
Preference number: 5 (lower is better)
Translates to: STVIPTNSHKGAMLTCQLLCTPS*SQASHN
Trigger: ATTATGAGATGCTTGACTCAAACTGGGTGTACATAG...TAGTTGGCAAGTCAACATTGCCCCTTTGTGGCTATTTGTGGGAATAACGGTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CAA 90 bp CTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAATGCTTTACATAAACTTCACAGCAGAGTaGGGTCTGCCCTTCATGGTC +
Preference number: 5 (lower is better)
Translates to: LGKITEEEEQEVLEMLYINFTAE*GLPFMV
Trigger: GACCATGAAGGGCAGACCCAACTCTGCTGTGAAGTT...TATGTAAAGCATTTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CAA 90 bp TGTTGTCCCACTGCTGTCTTGGTCCCTCCATCCTTTACAAATCCCTACAACAAATGGAACATATTCAGGTaGTATCAGCAAAGCAAATCT +
Preference number: 5 (lower is better)
Translates to: CCPTAVLVPPSFTNPYNKWNIFR*YQQSKS
Trigger: AGATTTGCTTTGCTGATACAACCTGAATATGTTCCA...TTTGTTGTAGGGATTTGTAAAGGATGGAGGGACCAAGACAGCAGTGGGACAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CAA 90 bp GACACTATGACATATCTTTCCACATTCAACTACAGCACTTGGGCAGTCAACAGACCTCTTCCAATGCAGTaGGAACATATTCAGGTTGTA +
Preference number: 5 (lower is better)
Translates to: DTMTYLSTFNYSTWAVNRPLPMQ*EHIQVV
Trigger: TACAACCTGAATATGTTCCAACTGCATTGGAAGAGG...TCTGTTGACTGCCCAAGTGCTGTAGTTGAATGTGGAAAGATATGTCATAGTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CAA 90 bp CTTCGCTGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAATGCCTCTTCCAATGCAGTaGGAACATATTCAGGTTGTA +
Preference number: 5 (lower is better)
Translates to: LRCLGKITEEEEQEVLEMPLPMQ*EHIQVV
Trigger: TACAACCTGAATATGTTCCAACTGCATTGGAAGAGG...CATTTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCAGCGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CAA 90 bp CACTCACTAACTGACATTTCTCTACTTCGCTGCCTAGGTAAAATCACTGAAGAGCCAACTATGAAGAGTTaGCTTAACTTCAGACGTTGC +
Preference number: 5 (lower is better)
Translates to: HSLTDISLLRCLGKITEEPTMKS*LNFRRC
Trigger: GCAACGTCTGAAGTTAAGCAAACTCTTCATAGTTGG...CTCTTCAGTGATTTTACCTAGGCAGCGAAGTAGAGAAATGTCAGTTAGTGAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CAA 90 bp TGTTATAGGTGCTCCTCAGTAGTCACAAGCTTTCAGACCCACATAAGATTGGAGGCAATGATCAGGACATaGAAAACAATGATCAGGAGA +
Preference number: 5 (lower is better)
Translates to: CYRCSSVVTSFQTHIRLEAMIRT*KTMIRR
Trigger: TCTCCTGATCATTGTTTTCAATGTCCTGATCATTGC...CTCCAATCTTATGTGGGTCTGAAAGCTTGTGACTACTGAGGAGCACCTATAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CAA 90 bp CTACTTCGCTGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAGAATGCTTCCATCTTTaGCCCATTTTGGAGGTCAAA +
Preference number: 5 (lower is better)
Translates to: LLRCLGKITEEEEQEVLEECFHL*PILEVK
Trigger: TTTGACCTCCAAAATGGGCAAAAGATGGAAGCATTC...TTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCAGCGAAGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641900.1
CDS-3UTR CAA 90 bp TGTTGTCCCACTGCTGTCTTGGTCCCTCCATCCTTTACAAATCCCTACAACAAAGATTGCCTTTCTAATTaGAATCTCAGTTTGGCTGTT +
Preference number: 5 (lower is better)
Translates to: CCPTAVLVPPSFTNPYNKDCLSN*NLSLAV
Trigger: AACAGCCAAACTGAGATTCAAATTAGAAAGGCAATC...TTTGTTGTAGGGATTTGTAAAGGATGGAGGGACCAAGACAGCAGTGGGACAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641900.1
CDS-3UTR CAA 90 bp TCTCTACTTCGCTGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAAGTAAAAATGAGACCTaGATCCCTCTCTTGGCTCTA +
Preference number: 5 (lower is better)
Translates to: SLLRCLGKITEEEEQEVLSKNET*IPLLAL
Trigger: TAGAGCCAAGAGAGGGATCAAGGTCTCATTTTTACT...TAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCAGCGAAGTAGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641900.1
CDS-3UTR CAA 90 bp CCAAGCCTGAAGGTACTAAGAGCCCCTTCCTGTAAGCCAATGGGTATAATTTTTGAGCTTCAATTGCAATaGATGAGGCATTTCAACTAT +
Preference number: 5 (lower is better)
Translates to: PSLKVLRAPSCKPMGIIFELQLQ*MRHFNY
Trigger: ATAGTTGAAATGCCTCATCAATTGCAATTGAAGCTC...AAAAATTATACCCATTGGCTTACAGGAAGGGGCTCTTAGTACCTTCAGGCTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CAA 90 bp GACACTATGACATATCTTTCCACATTCAACTACAGCACTTGGGCAGTCAACAGAAAAGTTCTTTTCTTCTaGCCCAGCAGAAGTTTTGTC +
Preference number: 5 (lower is better)
Translates to: DTMTYLSTFNYSTWAVNRKVLFF*PSRSFV
Trigger: GACAAAACTTCTGCTGGGCAAGAAGAAAAGAACTTT...TCTGTTGACTGCCCAAGTGCTGTAGTTGAATGTGGAAAGATATGTCATAGTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CAA 90 bp AGTACCGTTATTCCCACAAATAGCCACAAAGGGGCAATGTTGACTTGCCAACTAGATTGGTTTTGGTTTTaGTTTAACTCCCAGCCTTAT +
Preference number: 5 (lower is better)
Translates to: STVIPTNSHKGAMLTCQLDWFWF*FNSQPY
Trigger: ATAAGGCTGGGAGTTAAACAAAAACCAAAACCAATC...TAGTTGGCAAGTCAACATTGCCCCTTTGTGGCTATTTGTGGGAATAACGGTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CAA 90 bp AATGAAGGGAGCCTCAGTGCATGCAATAAACACTCACTAACTGACATTTCTCTAATTCTAGTCTCCAGATaGGTTGGTTGGTTGATTGGT +
Preference number: 5 (lower is better)
Translates to: NEGSLSACNKHSLTDISLILVSR*VGWLIG
Trigger: ACCAATCAACCAACCAACCAATCTGGAGACTAGAAT...TAGAGAAATGTCAGTTAGTGAGTGTTTATTGCATGCACTGAGGCTCCCTTCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CAA 90 bp AATGAAGGGAGCCTCAGTGCATGCAATAAACACTCACTAACTGACATTTCTCTAAGAAACATTAGAAGGTaGAAACATGGAGAGGGACAC +
Preference number: 5 (lower is better)
Translates to: NEGSLSACNKHSLTDISLRNIRR*KHGEGH
Trigger: GTGTCCCTCTCCATGTTTCAACCTTCTAATGTTTCT...TAGAGAAATGTCAGTTAGTGAGTGTTTATTGCATGCACTGAGGCTCCCTTCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CAA 90 bp CTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAATGCTTTACATACAGACCCACATAAGATaGGAGCTGCGCCAGTTACTA +
Preference number: 5 (lower is better)
Translates to: LGKITEEEEQEVLEMLYIQTHIR*ELRQLL
Trigger: TAGTAACTGGCGCAGCTCCAATCTTATGTGGGTCTG...TATGTAAAGCATTTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CAA 90 bp TGTTATAGGTGCTCCTCAGTAGTCACAAGCTTTCAGACCCACATAAGATTGGAGCATCTCATAATTGTGTaGGCCATTTGCATTGATCTA +
Preference number: 5 (lower is better)
Translates to: CYRCSSVVTSFQTHIRLEHLIIV*AICIDL
Trigger: TAGATCAATGCAAATGGCCAACACAATTATGAGATG...CTCCAATCTTATGTGGGTCTGAAAGCTTGTGACTACTGAGGAGCACCTATAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CAA 90 bp TGTTATAGGTGCTCCTCAGTAGTCACAAGCTTTCAGACCCACATAAGATTGGAGTCATGGTCTGATTCTTaGGTTATCTTGCTCCTTTAT +
Preference number: 5 (lower is better)
Translates to: CYRCSSVVTSFQTHIRLESWSDS*VILLLY
Trigger: ATAAAGGAGCAAGATAACCAAAGAATCAGACCATGA...CTCCAATCTTATGTGGGTCTGAAAGCTTGTGACTACTGAGGAGCACCTATAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CAA 90 bp ATTTCTCTACTTCGCTGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATATCATTTTGCTCAGTaGCCTCATCTGCAAAAATGG +
Preference number: 5 (lower is better)
Translates to: ISLLRCLGKITEEEEQEVYHFAQ*PHLQKW
Trigger: CCATTTTTGCAGATGAGGCAACTGAGCAAAATGATA...TACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCAGCGAAGTAGAGAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CAA 90 bp GACATTTCTCTACTTCGCTGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGACTTCTAATACTATGTaGAACAGAAGTGGTGAGAGA +
Preference number: 5 (lower is better)
Translates to: DISLLRCLGKITEEEEQETSNTM*NRSGER
Trigger: TCTCTCACCACTTCTGTTCAACATAGTATTAGAAGT...CTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCAGCGAAGTAGAGAAATGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641900.1
CDS-3UTR CAA 90 bp CGCTGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAATGCTTATCTCAGTTTGGCTGTaGTTGTTATGTAGGAATGCT +
Preference number: 5 (lower is better)
Translates to: RCLGKITEEEEQEVLEMLISVWL*LLCRNA
Trigger: AGCATTCCTACATAACAACAACAGCCAAACTGAGAT...AAGCATTTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCAGCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641900.1
CDS-3UTR CAA 90 bp CTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAATGCTTTACATACCCTGTTTTATCTCTTaGGTCCGAACCCCATACACA +
Preference number: 5 (lower is better)
Translates to: LGKITEEEEQEVLEMLYIPCFIS*VRTPYT
Trigger: TGTGTATGGGGTTCGGACCAAAGAGATAAAACAGGG...TATGTAAAGCATTTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641423.1
ENST00000641900.1
ENST00000641938.1
CDS-3UTR CAA 90 bp CTTCGCTGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAATGGAGCTTCAATTGCAATaGATGAGGCATTTCAACTAT +
Preference number: 5 (lower is better)
Translates to: LRCLGKITEEEEQEVLEMELQLQ*MRHFNY
Trigger: ATAGTTGAAATGCCTCATCAATTGCAATTGAAGCTC...CATTTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCAGCGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CAA 90 bp TGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAATGCTTTACGGTCTTGAGCTTCAATaGCAATTGATGAGGCATTTC +
Preference number: 5 (lower is better)
Translates to: CLGKITEEEEQEVLEMLYGLELQ*QLMRHF
Trigger: GAAATGCCTCATCAATTGCAATTGAAGCTCAAGACC...GTAAAGCATTTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CAA 90 bp AATGAAGGGAGCCTCAGTGCATGCAATAAACACTCACTAACTGACATTTCTCTAAAAGTTCTTTTCTTCTaGCCCAGCAGAAGTTTTGTC +
Preference number: 5 (lower is better)
Translates to: NEGSLSACNKHSLTDISLKVLFF*PSRSFV
Trigger: GACAAAACTTCTGCTGGGCAAGAAGAAAAGAACTTT...TAGAGAAATGTCAGTTAGTGAGTGTTTATTGCATGCACTGAGGCTCCCTTCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CAA 90 bp GACACTATGACATATCTTTCCACATTCAACTACAGCACTTGGGCAGTCAACAGACAGCAACTCTTTATCTaGGAAGTGGAATTGATTCTA +
Preference number: 5 (lower is better)
Translates to: DTMTYLSTFNYSTWAVNRQQLFI*EVELIL
Trigger: TAGAATCAATTCCACTTCCAAGATAAAGAGTTGCTG...TCTGTTGACTGCCCAAGTGCTGTAGTTGAATGTGGAAAGATATGTCATAGTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CAA 90 bp CTACTTCGCTGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAATTTTCTTTCCTACTGTaGTTGAGTGACTGGAAGAAA +
Preference number: 5 (lower is better)
Translates to: LLRCLGKITEEEEQEVLEFSFLL*LSDWKK
Trigger: TTTCTTCCAGTCACTCAACAACAGTAGGAAAGAAAA...TTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCAGCGAAGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CAA 90 bp CGCTGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAATGCTTAAATCAGTGGTGAAGTaGGCCTTTATATCATCTAAG +
Preference number: 5 (lower is better)
Translates to: RCLGKITEEEEQEVLEMLKSVVK*AFISSK
Trigger: CTTAGATGATATAAAGGCCAACTTCACCACTGATTT...AAGCATTTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCAGCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CAA 90 bp CTACTTCGCTGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAGAGTTGACCAAATGCTaGAAAATATCACCTGATTAC +
Preference number: 5 (lower is better)
Translates to: LLRCLGKITEEEEQEVLEELTKC*KISPDY
Trigger: GTAATCAGGTGATATTTTCAAGCATTTGGTCAACTC...TTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCAGCGAAGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CAA 90 bp CGCTGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAATGCTTGAGTTGACCAAATGCTaGAAAATATCACCTGATTAC +
Preference number: 5 (lower is better)
Translates to: RCLGKITEEEEQEVLEMLELTKC*KISPDY
Trigger: GTAATCAGGTGATATTTTCAAGCATTTGGTCAACTC...AAGCATTTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCAGCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CAA 90 bp CTTCGCTGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAATGGAAAGACGAATGGAGTaGACCAAATGCTTGAAAATA +
Preference number: 5 (lower is better)
Translates to: LRCLGKITEEEEQEVLEMERRME*TKCLKI
Trigger: TATTTTCAAGCATTTGGTCAACTCCATTCGTCTTTC...CATTTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCAGCGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CAA 90 bp GACACTATGACATATCTTTCCACATTCAACTACAGCACTTGGGCAGTCAACAGAATGTGGTTTATCCATTaGTTACGTTTAGGACTCTAC +
Preference number: 5 (lower is better)
Translates to: DTMTYLSTFNYSTWAVNRMWFIH*LRLGLY
Trigger: GTAGAGTCCTAAACGTAACAAATGGATAAACCACAT...TCTGTTGACTGCCCAAGTGCTGTAGTTGAATGTGGAAAGATATGTCATAGTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CAA 90 bp CTACTTCGCTGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAATCATGGTCTGATTCTTaGGTTATCTTGCTCCTTTAT +
Preference number: 5 (lower is better)
Translates to: LLRCLGKITEEEEQEVLESWSDS*VILLLY
Trigger: ATAAAGGAGCAAGATAACCAAAGAATCAGACCATGA...TTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCAGCGAAGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CAA 90 bp CTACTTCGCTGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAATGGAACATATTCAGGTaGTATCAGCAAAGCAAATCT +
Preference number: 5 (lower is better)
Translates to: LLRCLGKITEEEEQEVLEWNIFR*YQQSKS
Trigger: AGATTTGCTTTGCTGATACAACCTGAATATGTTCCA...TTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCAGCGAAGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CAA 90 bp CGCTGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAATGCTTGCAAACAGAGACAGTTaGACTTCATGTCTTCTTATT +
Preference number: 5 (lower is better)
Translates to: RCLGKITEEEEQEVLEMLANRDS*TSCLLI
Trigger: AATAAGAAGACATGAAGTCAAACTGTCTCTGTTTGC...AAGCATTTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCAGCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641900.1
CDS-3UTR CAA 90 bp CTTCGCTGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAATGTTGGTATTTTATTTTTaGTGTGGCAGCTGTGAATGG +
Preference number: 5 (lower is better)
Translates to: LRCLGKITEEEEQEVLEMLVFYF*CGSCEW
Trigger: CCATTCACAGCTGCCACACAAAAAATAAAATACCAA...CATTTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCAGCGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000641900.1
CDS-3UTR CAA 90 bp AATGAAGGGAGCCTCAGTGCATGCAATAAACACTCACTAACTGACATTTCTCTAGAAAGACGAATGGAGTaGACCAAATGCTTGAAAATA +
Preference number: 5 (lower is better)
Translates to: NEGSLSACNKHSLTDISLERRME*TKCLKI
Trigger: TATTTTCAAGCATTTGGTCAACTCCATTCGTCTTTC...TAGAGAAATGTCAGTTAGTGAGTGTTTATTGCATGCACTGAGGCTCCCTTCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CAA 90 bp AATGAAGGGAGCCTCAGTGCATGCAATAAACACTCACTAACTGACATTTCTCTAATGTGGTTTATCCATTaGTTACGTTTAGGACTCTAC +
Preference number: 5 (lower is better)
Translates to: NEGSLSACNKHSLTDISLMWFIH*LRLGLY
Trigger: GTAGAGTCCTAAACGTAACAAATGGATAAACCACAT...TAGAGAAATGTCAGTTAGTGAGTGTTTATTGCATGCACTGAGGCTCCCTTCATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CAA 90 bp CTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAATGCTTTACATAGGTCTTGAGCTTCAATaGCAATTGATGAGGCATTTC +
Preference number: 5 (lower is better)
Translates to: LGKITEEEEQEVLEMLYIGLELQ*QLMRHF
Trigger: GAAATGCCTCATCAATTGCAATTGAAGCTCAAGACC...TATGTAAAGCATTTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CAA 90 bp TGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAATGCTTTACAAATCAGTGGTGAAGTaGGCCTTTATATCATCTAAG +
Preference number: 5 (lower is better)
Translates to: CLGKITEEEEQEVLEMLYKSVVK*AFISSK
Trigger: CTTAGATGATATAAAGGCCAACTTCACCACTGATTT...GTAAAGCATTTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CAA 90 bp TGCCTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAATGCTTTACACATGTTTTAACATTTaGCTATGGGAACTTCACAGC +
Preference number: 5 (lower is better)
Translates to: CLGKITEEEEQEVLEMLYTCFNI*LWELHS
Trigger: GCTGTGAAGTTCCCATAGCAAAATGTTAAAACATGT...GTAAAGCATTTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAGGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CAA 90 bp CTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAATGCTTTACATACCAACTATGAAGAGTTaGCTTAACTTCAGACGTTGC +
Preference number: 5 (lower is better)
Translates to: LGKITEEEEQEVLEMLYIPTMKS*LNFRRC
Trigger: GCAACGTCTGAAGTTAAGCAAACTCTTCATAGTTGG...TATGTAAAGCATTTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CAA 90 bp CTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAATGCTTTACATAATCTTGGAAGTGGAATaGATTCTAGTCTCCAGATTG +
Preference number: 5 (lower is better)
Translates to: LGKITEEEEQEVLEMLYIILEVE*ILVSRL
Trigger: CAATCTGGAGACTAGAATCAATTCCACTTCCAAGAT...TATGTAAAGCATTTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CAA 90 bp CTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAATGCTTTACATATATCATTTTGCTCAGTaGCCTCATCTGCAAAAATGG +
Preference number: 5 (lower is better)
Translates to: LGKITEEEEQEVLEMLYIYHFAQ*PHLQKW
Trigger: CCATTTTTGCAGATGAGGCAACTGAGCAAAATGATA...TATGTAAAGCATTTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CAA 90 bp CTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAATGCTTTACATAGATTGGTTTTGGTTTTaGTTTAACTCCCAGCCTTAT +
Preference number: 5 (lower is better)
Translates to: LGKITEEEEQEVLEMLYIDWFWF*FNSQPY
Trigger: ATAAGGCTGGGAGTTAAACAAAAACCAAAACCAATC...TATGTAAAGCATTTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CAA 90 bp CTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAATGCTTTACATACAGCAACTCTTTATCTaGGAAGTGGAATTGATTCTA +
Preference number: 5 (lower is better)
Translates to: LGKITEEEEQEVLEMLYIQQLFI*EVELIL
Trigger: TAGAATCAATTCCACTTCCAAGATAAAGAGTTGCTG...TATGTAAAGCATTTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1
CDS-3UTR CAA 90 bp CTAGGTAAAATCACTGAAGAGGAAGAACAGGAGGTATTAGAAATGCTTTACATAACATGTTTTAACATTTaGCTATGGGAACTTCACAGC +
Preference number: 5 (lower is better)
Translates to: LGKITEEEEQEVLEMLYITCFNI*LWELHS
Trigger: GCTGTGAAGTTCCCATAGCAAAATGTTAAAACATGT...TATGTAAAGCATTTCTAATACCTCCTGTTCTTCCTCTTCAGTGATTTTACCTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641423.1
ENST00000641900.1