Pregenerated sensors for OR52R1 (Homo sapiens)
Ensembl gene IDs: ENSG00000279270Ensembl transcript IDs: ENST00000624978.1
Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CAGCCCTCTCAGCATCACGATGGTCCCCAGTTTGATCACGACCGATaGGGTCAGGATGCTAGAGTGTCGGAGTGGGAAGCAGATAGCCAC | + |
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Preference number: 5 (lower is better) Translates to: QPSQHHDGPQFDHDR*GQDARVSEWEADSH Trigger: GTGGCTATCTGCTTCCCACTCCGACACTCTAGCATCCTGACCCCATCGGTCGTGATCAAACTGGGGACCATCGTGATGCTGAGAGGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000624978.1 |
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| CDS TCA 90 bp | GAACGTGTGCTAAAAGCTTTGAGGCGGGCTTCACCTGAGGGCAACTaGAGCACAGCTCTCAAAATCATCACGTATGACATACCAATGACA | + |
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Preference number: 5 (lower is better) Translates to: ERVLKALRRASPEGN*STALKIITYDIPMT Trigger: TGTCATTGGTATGTCATACGTGATGATTTTGAGAGCTGTGCTTCAGTTGCCCTCAGGTGAAGCCCGCCTCAAAGCTTTTAGCACACGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000624978.1 |
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| CDS CAA 90 bp | GGGCTCACCCACAGCAGCCCTCTCAGCATCACGATGGTCCCCAGTTaGATCACGACCGATGGGGTCAGGATGCTAGAGTGTCGGAGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: GLTHSSPLSITMVPS*ITTDGVRMLECRSG Trigger: CCCACTCCGACACTCTAGCATCCTGACCCCATCGGTCGTGATCAAACTGGGGACCATCGTGATGCTGAGAGGGCTGCTGTGGGTGAGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000624978.1 |
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| CDS CAA 72 bp | CACAGCAGCCCTCTCAGCATCACGATGGTCCCCAGTTaGATCACGACCGATGGGGTCAGGATGCTAGAGTGT | + |
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Preference number: 6 (lower is better) Translates to: HSSPLSITMVPS*ITTDGVRMLEC Trigger: ACACTCTAGCATCCTGACCCCATCGGTCGTGATCAAACTGGGGACCATCGTGATGCTGAGAGGGCTGCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000624978.1 |
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| CDS GCA 72 bp | CAGAGAAGGCCACAAAGAGCCCATTCCCACGACTTATaGTTGTATCAGCACACACCAACTTCAGCACAGCCA | + |
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Preference number: 6 (lower is better) Translates to: QRRPQRAHSHDL*LYQHTPTSAQP Trigger: TGGCTGTGCTGAAGTTGGTGTGTGCTGATACAAGCATAAGTCGTGGGAATGGGCTCTTTGTGGCCTTCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000624978.1 |
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| CDS TCA 72 bp | CTAAAAGCTTTGAGGCGGGCTTCACCTGAGGGCAACTaGAGCACAGCTCTCAAAATCATCACGTATGACATA | + |
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Preference number: 6 (lower is better) Translates to: LKALRRASPEGN*STALKIITYDI Trigger: TATGTCATACGTGATGATTTTGAGAGCTGTGCTTCAGTTGCCCTCAGGTGAAGCCCGCCTCAAAGCTTTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000624978.1 |
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