Pregenerated sensors for OR52N5 (Homo sapiens)
Ensembl gene IDs: ENSG00000181009Ensembl transcript IDs: ENST00000317093.2, ENST00000641181.1
Found 68 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | AACCTAATTTTAGCTTCAAAGACTGACTGGGCTGGAAAATGTTCTATAGGAAAGGTGGTTACCAGATGCTaGGAATGGTGGGAGGAAGAG | + |
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Preference number: 2 (lower is better) Translates to: NLILASKTDWAGKCSIGKVVTRC*EWWEEE Trigger: CTCTTCCTCCCACCATTCCCAGCATCTGGTAACCAC...CTTTCCTATAGAACATTTTCCAGCCCAGTCAGTCTTTGAAGCTAAAATTAGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641181.1 |
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| 3UTR-3UTR GCA 90 bp | CTAATTTTAGCTTCAAAGACTGACTGGGCTGGAAAATGTTCTATAGGAAAGATTCTGGTGGTTACCAGATaGTGGGAATGGTGGGAGGAA | + |
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Preference number: 2 (lower is better) Translates to: LILASKTDWAGKCSIGKILVVTR*WEWWEE Trigger: TTCCTCCCACCATTCCCAGCATCTGGTAACCACCAG...AATCTTTCCTATAGAACATTTTCCAGCCCAGTCAGTCTTTGAAGCTAAAATTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641181.1 |
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| 3UTR-3UTR CCA 90 bp | CTAATTTTAGCTTCAAAGACTGACTGGGCTGGAAAATGTTCTATAGGAAAGATTACCAGATGCTGGGAATaGTGGGAGGAAGAGAGGATG | + |
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Preference number: 2 (lower is better) Translates to: LILASKTDWAGKCSIGKITRCWE*WEEERM Trigger: CATCCTCTCTTCCTCCCACCATTCCCAGCATCTGGT...AATCTTTCCTATAGAACATTTTCCAGCCCAGTCAGTCTTTGAAGCTAAAATTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641181.1 |
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| 3UTR-3UTR TCA 90 bp | AATTGGTTGACATTTAACTGGGAAAGCCATACCATATACCAACTAGCTCCTGCATTGATGGACACAGGTTaGTTTCATGTCTTGGCTATT | + |
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Preference number: 2 (lower is better) Translates to: NWLTFNWESHTIYQLAPALMDTG*FHVLAI Trigger: AATAGCCAAGACATGAAATCAACCTGTGTCCATCAA...TGCAGGAGCTAGTTGGTATATGGTATGGCTTTCCCAGTTAAATGTCAACCAATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641181.1 |
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| 3UTR-3UTR CCA 90 bp | AATTGGTTGACATTTAACTGGGAAAGCCATACCATATACCAACTAGCTCCTGCAGCTTCAAAGACTGACTaGGCTGGAAAATGTTCTATA | + |
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Preference number: 2 (lower is better) Translates to: NWLTFNWESHTIYQLAPAASKTD*AGKCSI Trigger: TATAGAACATTTTCCAGCCCAGTCAGTCTTTGAAGC...TGCAGGAGCTAGTTGGTATATGGTATGGCTTTCCCAGTTAAATGTCAACCAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641181.1 |
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| 3UTR-3UTR CCA 90 bp | AACCTAATTTTAGCTTCAAAGACTGACTGGGCTGGAAAATGTTCTATAGGAAAGGGGAGTGCAGGTATCTaGTATCTCTTCAACATATTG | + |
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Preference number: 2 (lower is better) Translates to: NLILASKTDWAGKCSIGKGSAGI*YLFNIL Trigger: CAATATGTTGAAGAGATACCAGATACCTGCACTCCC...CTTTCCTATAGAACATTTTCCAGCCCAGTCAGTCTTTGAAGCTAAAATTAGGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000641181.1 |
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| 3UTR-3UTR TCA 90 bp | CTAATTTTAGCTTCAAAGACTGACTGGGCTGGAAAATGTTCTATAGGAAAGATTTTAAGGGAAAGGCACTaGGATATACATCCAGAATGG | + |
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Preference number: 2 (lower is better) Translates to: LILASKTDWAGKCSIGKILRERH*DIHPEW Trigger: CCATTCTGGATGTATATCTCAGTGCCTTTCCCTTAA...AATCTTTCCTATAGAACATTTTCCAGCCCAGTCAGTCTTTGAAGCTAAAATTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000641181.1 |
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| 3UTR-3UTR TCA 90 bp | AACCTAATTTTAGCTTCAAAGACTGACTGGGCTGGAAAATGTTCTATAGGAAAGTTCCAGCTTCATCCATaGTGCTGCAAATTACAGAAT | + |
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Preference number: 2 (lower is better) Translates to: NLILASKTDWAGKCSIGKFQLHP*CCKLQN Trigger: ATTCTGTAATTTGCAGCATCATGGATGAAGCTGGAA...CTTTCCTATAGAACATTTTCCAGCCCAGTCAGTCTTTGAAGCTAAAATTAGGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641181.1 |
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| 3UTR-3UTR CCA 90 bp | AATTGGTTGACATTTAACTGGGAAAGCCATACCATATACCAACTAGCTCCTGCATTGTCTTTCTGTGGCTaGCTTATTTCATTTAACATG | + |
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Preference number: 2 (lower is better) Translates to: NWLTFNWESHTIYQLAPALSFCG*LISFNM Trigger: CATGTTAAATGAAATAAGCCAGCCACAGAAAGACAA...TGCAGGAGCTAGTTGGTATATGGTATGGCTTTCCCAGTTAAATGTCAACCAATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641181.1 |
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| 3UTR-3UTR TCA 90 bp | CTAATTTTAGCTTCAAAGACTGACTGGGCTGGAAAATGTTCTATAGGAAAGATTATGTCTTGGCTATTGTaGACAATGTTGCAACAAACA | + |
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Preference number: 2 (lower is better) Translates to: LILASKTDWAGKCSIGKIMSWLL*TMLQQT Trigger: TGTTTGTTGCAACATTGTTCACAATAGCCAAGACAT...AATCTTTCCTATAGAACATTTTCCAGCCCAGTCAGTCTTTGAAGCTAAAATTAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641181.1 |
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| 3UTR-3UTR GCA 90 bp | CTAATTTTAGCTTCAAAGACTGACTGGGCTGGAAAATGTTCTATAGGAAAGATTTATTGTGAACAATGTTaGAACAAACATGGGAGTGCA | + |
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Preference number: 2 (lower is better) Translates to: LILASKTDWAGKCSIGKIYCEQC*NKHGSA Trigger: TGCACTCCCATGTTTGTTGCAACATTGTTCACAATA...AATCTTTCCTATAGAACATTTTCCAGCCCAGTCAGTCTTTGAAGCTAAAATTAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641181.1 |
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| 3UTR-3UTR CCA 90 bp | CTAATTTTAGCTTCAAAGACTGACTGGGCTGGAAAATGTTCTATAGGAAAGATTGATATACATCCAGAATaGGCTATAAATTTCCCCAAA | + |
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Preference number: 2 (lower is better) Translates to: LILASKTDWAGKCSIGKIDIHPE*AINFPK Trigger: TTTGGGGAAATTTATAGCCCATTCTGGATGTATATC...AATCTTTCCTATAGAACATTTTCCAGCCCAGTCAGTCTTTGAAGCTAAAATTAG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000641181.1 |
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| 3UTR CCA 72 bp | TTAATCAATCATTTCACCAATTGGTTGACATTTAACTaGGAAAGCCATACCATATACCAACTAGCTCCTGCA | + |
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Preference number: 3 (lower is better) Translates to: LINHFTNWLTFN*ESHTIYQLAPA Trigger: TGCAGGAGCTAGTTGGTATATGGTATGGCTTTCCCAGTTAAATGTCAACCAATTGGTGAAATGATTGATTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641181.1 |
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| 3UTR-3UTR CAA 90 bp | AACCTAATTTTAGCTTCAAAGACTGACTGGGCTGGAAAATGTTCTATAGGAAAGATTCATACCAACGACTaGATTAAAACGGGCAATGTA | + |
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Preference number: 3 (lower is better) Translates to: NLILASKTDWAGKCSIGKIHTND*IKTGNV Trigger: TACATTGCCCGTTTTAATCAAGTCGTTGGTATGAAT...CTTTCCTATAGAACATTTTCCAGCCCAGTCAGTCTTTGAAGCTAAAATTAGGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000641181.1 |
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| CDS-3UTR GCA 90 bp | CTAATTTTAGCTTCAAAGACTGACTGGGCTGGAAAATGTTCTATAGGAAAGATTCACTGTTGCATCCTGTaGGGCCTCCTCATCCCACGC | + |
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Preference number: 4 (lower is better) Translates to: LILASKTDWAGKCSIGKIHCCIL*GLLIPR Trigger: GCGTGGGATGAGGAGGCCGCACAGGATGCAACAGTG...AATCTTTCCTATAGAACATTTTCCAGCCCAGTCAGTCTTTGAAGCTAAAATTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641181.1 |
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| CDS-3UTR GCA 90 bp | ATCCACTTCTCTGTTGATGGACACAGGTTGATTTCATGTCTTGGCTATTGTGAACTGGTGGTTACCAGATaGTGGGAATGGTGGGAGGAA | + |
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Preference number: 4 (lower is better) Translates to: IHFSVDGHRLISCLGYCELVVTR*WEWWEE Trigger: TTCCTCCCACCATTCCCAGCATCTGGTAACCACCAG...TTCACAATAGCCAAGACATGAAATCAACCTGTGTCCATCAACAGAGAAGTGGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641181.1 |
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| CDS-3UTR CCA 90 bp | AATTGGTTGACATTTAACTGGGAAAGCCATACCATATACCAACTAGCTCCTGCAAGATGCAGAGTGCATTaGGTAGAGTGGTGGTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: NWLTFNWESHTIYQLAPARCRVH*VEWWCR Trigger: CCTGCACCACCACTCTACCCAATGCACTCTGCATCT...TGCAGGAGCTAGTTGGTATATGGTATGGCTTTCCCAGTTAAATGTCAACCAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641181.1 |
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| CDS-3UTR CCA 90 bp | ATCCACTTCTCTGTTGATGGACACAGGTTGATTTCATGTCTTGGCTATTGTGAAGTGGTTACCAGATGCTaGGAATGGTGGGAGGAAGAG | + |
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Preference number: 4 (lower is better) Translates to: IHFSVDGHRLISCLGYCEVVTRC*EWWEEE Trigger: CTCTTCCTCCCACCATTCCCAGCATCTGGTAACCAC...TTCACAATAGCCAAGACATGAAATCAACCTGTGTCCATCAACAGAGAAGTGGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641181.1 |
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| CDS-3UTR CCA 90 bp | ATCCACTTCTCTGTTGATGGACACAGGTTGATTTCATGTCTTGGCTATTGTGAATCCTGCACTGACTTCTaGTGTACGCAAGCCTTGAGG | + |
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Preference number: 4 (lower is better) Translates to: IHFSVDGHRLISCLGYCESCTDF*CTQALR Trigger: CCTCAAGGCTTGCGTACACCAGAAGTCAGTGCAGGA...TTCACAATAGCCAAGACATGAAATCAACCTGTGTCCATCAACAGAGAAGTGGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641181.1 |
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| CDS-3UTR TCA 90 bp | AATTGGTTGACATTTAACTGGGAAAGCCATACCATATACCAACTAGCTCCTGCATCCCCACAAGGAAGATaGTGTACATTGTGCAGAGTG | + |
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Preference number: 4 (lower is better) Translates to: NWLTFNWESHTIYQLAPASPQGR*CTLCRV Trigger: CACTCTGCACAATGTACATCATCTTCCTTGTGGGGA...TGCAGGAGCTAGTTGGTATATGGTATGGCTTTCCCAGTTAAATGTCAACCAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641181.1 |
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| CDS-3UTR TCA 90 bp | AATTGGTTGACATTTAACTGGGAAAGCCATACCATATACCAACTAGCTCCTGCACAGACTCCACACCTGTaGACCCATGAACAAAGAACA | + |
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Preference number: 4 (lower is better) Translates to: NWLTFNWESHTIYQLAPAQTPHL*THEQRT Trigger: TGTTCTTTGTTCATGGGTTCACAGGTGTGGAGTCTG...TGCAGGAGCTAGTTGGTATATGGTATGGCTTTCCCAGTTAAATGTCAACCAATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641181.1 |
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| CDS-3UTR TCA 90 bp | ATCCACTTCTCTGTTGATGGACACAGGTTGATTTCATGTCTTGGCTATTGTGAACGCTGGGCAGCCATTTaGCACAAAATACATGTAGCA | + |
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Preference number: 4 (lower is better) Translates to: IHFSVDGHRLISCLGYCERWAAI*HKIHVA Trigger: TGCTACATGTATTTTGTGTCAAATGGCTGCCCAGCG...TTCACAATAGCCAAGACATGAAATCAACCTGTGTCCATCAACAGAGAAGTGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641181.1 |
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| CDS-3UTR TCA 90 bp | AATTGGTTGACATTTAACTGGGAAAGCCATACCATATACCAACTAGCTCCTGCAATGAGTTCCATTACCTaGTGTAGATGTCCACGCCTC | + |
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Preference number: 4 (lower is better) Translates to: NWLTFNWESHTIYQLAPAMSSIT*CRCPRL Trigger: GAGGCGTGGACATCTACATCAGGTAATGGAACTCAT...TGCAGGAGCTAGTTGGTATATGGTATGGCTTTCCCAGTTAAATGTCAACCAATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641181.1 |
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| CDS-3UTR GCA 90 bp | ATCCACTTCTCTGTTGATGGACACAGGTTGATTTCATGTCTTGGCTATTGTGAAAGAGAGGCTGATCGCTaGCTTGAGGATCAAAGTGTA | + |
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Preference number: 4 (lower is better) Translates to: IHFSVDGHRLISCLGYCEREADR*LEDQSV Trigger: TACACTTTGATCCTCAAGGCAGCGATCAGCCTCTCT...TTCACAATAGCCAAGACATGAAATCAACCTGTGTCCATCAACAGAGAAGTGGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641181.1 |
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| CDS-3UTR GCA 90 bp | ATCCACTTCTCTGTTGATGGACACAGGTTGATTTCATGTCTTGGCTATTGTGAATGCCTTGAATCAACCTaGACCCTTATCACCCTGGAA | + |
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Preference number: 4 (lower is better) Translates to: IHFSVDGHRLISCLGYCECLEST*TLITLE Trigger: TTCCAGGGTGATAAGGGTGCAGGTTGATTCAAGGCA...TTCACAATAGCCAAGACATGAAATCAACCTGTGTCCATCAACAGAGAAGTGGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641181.1 |
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| CDS-3UTR GCA 90 bp | AATTGGTTGACATTTAACTGGGAAAGCCATACCATATACCAACTAGCTCCTGCATGTAGCATCCATGGTTaGCTCTGGCCACAATATAGC | + |
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Preference number: 4 (lower is better) Translates to: NWLTFNWESHTIYQLAPACSIHG*LWPQYS Trigger: GCTATATTGTGGCCAGAGGCAACCATGGATGCTACA...TGCAGGAGCTAGTTGGTATATGGTATGGCTTTCCCAGTTAAATGTCAACCAATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641181.1 |
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| CDS-3UTR GCA 90 bp | ATCCACTTCTCTGTTGATGGACACAGGTTGATTTCATGTCTTGGCTATTGTGAAATACCAACTAGCTCCTaGACTGACTTCTGGTGTACG | + |
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Preference number: 4 (lower is better) Translates to: IHFSVDGHRLISCLGYCEIPTSS*TDFWCT Trigger: CGTACACCAGAAGTCAGTGCAGGAGCTAGTTGGTAT...TTCACAATAGCCAAGACATGAAATCAACCTGTGTCCATCAACAGAGAAGTGGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641181.1 |
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| CDS-3UTR CCA 90 bp | ATCCACTTCTCTGTTGATGGACACAGGTTGATTTCATGTCTTGGCTATTGTGAAGTACATTGTGCAGAGTaGGAGGGAGATCCATACATG | + |
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Preference number: 4 (lower is better) Translates to: IHFSVDGHRLISCLGYCEVHCAE*EGDPYM Trigger: CATGTATGGATCTCCCTCCCACTCTGCACAATGTAC...TTCACAATAGCCAAGACATGAAATCAACCTGTGTCCATCAACAGAGAAGTGGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641181.1 |
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| CDS-3UTR TCA 90 bp | ATCCACTTCTCTGTTGATGGACACAGGTTGATTTCATGTCTTGGCTATTGTGAATTAGCCACAATGATGTaGAGAGAAGGGGGAATTGTG | + |
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Preference number: 4 (lower is better) Translates to: IHFSVDGHRLISCLGYCELATMM*REGGIV Trigger: CACAATTCCCCCTTCTCTTCACATCATTGTGGCTAA...TTCACAATAGCCAAGACATGAAATCAACCTGTGTCCATCAACAGAGAAGTGGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000641181.1 |
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| CDS-3UTR TCA 90 bp | AACCTAATTTTAGCTTCAAAGACTGACTGGGCTGGAAAATGTTCTATAGGAAAGGCTCCTGAGGAGAAGTaGTGTGAAAGGTGTTCATGC | + |
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Preference number: 4 (lower is better) Translates to: NLILASKTDWAGKCSIGKAPEEK*CERCSC Trigger: GCATGAACACCTTTCACATCACTTCTCCTCAGGAGC...CTTTCCTATAGAACATTTTCCAGCCCAGTCAGTCTTTGAAGCTAAAATTAGGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641181.1 |
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| CDS-3UTR GCA 90 bp | AACCTAATTTTAGCTTCAAAGACTGACTGGGCTGGAAAATGTTCTATAGGAAAGGTGCTGAAAGCCTTCTaGCGAGCATCTGATGAAGAG | + |
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Preference number: 4 (lower is better) Translates to: NLILASKTDWAGKCSIGKVLKAF*RASDEE Trigger: CTCTTCATCAGATGCTCGGCAGAAGGCTTTCAGCAC...CTTTCCTATAGAACATTTTCCAGCCCAGTCAGTCTTTGAAGCTAAAATTAGGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641181.1 |
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| CDS-3UTR GCA 90 bp | ATCCACTTCTCTGTTGATGGACACAGGTTGATTTCATGTCTTGGCTATTGTGAACACATCAAGATATGCTaGAGCTTACGACCTTGTGTC | + |
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Preference number: 4 (lower is better) Translates to: IHFSVDGHRLISCLGYCEHIKIC*SLRPCV Trigger: GACACAAGGTCGTAAGCTGCAGCATATCTTGATGTG...TTCACAATAGCCAAGACATGAAATCAACCTGTGTCCATCAACAGAGAAGTGGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641181.1 |
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| CDS-3UTR TCA 90 bp | AACCTAATTTTAGCTTCAAAGACTGACTGGGCTGGAAAATGTTCTATAGGAAAGGAAGGGTGGAGTGATTaGTCCTATCACTGTTGCATC | + |
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Preference number: 4 (lower is better) Translates to: NLILASKTDWAGKCSIGKEGWSD*SYHCCI Trigger: GATGCAACAGTGATAGGATCAATCACTCCACCCTTC...CTTTCCTATAGAACATTTTCCAGCCCAGTCAGTCTTTGAAGCTAAAATTAGGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641181.1 |
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| CDS-3UTR TCA 90 bp | AATTGGTTGACATTTAACTGGGAAAGCCATACCATATACCAACTAGCTCCTGCATTAAGGGAAAGGCACTaGGATATACATCCAGAATGG | + |
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Preference number: 4 (lower is better) Translates to: NWLTFNWESHTIYQLAPALRERH*DIHPEW Trigger: CCATTCTGGATGTATATCTCAGTGCCTTTCCCTTAA...TGCAGGAGCTAGTTGGTATATGGTATGGCTTTCCCAGTTAAATGTCAACCAATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641181.1 |
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| CDS-3UTR TCA 90 bp | ATCCACTTCTCTGTTGATGGACACAGGTTGATTTCATGTCTTGGCTATTGTGAATTTAGCTTCAAAGACTaGCTGGGCTGGAAAATGTTC | + |
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Preference number: 4 (lower is better) Translates to: IHFSVDGHRLISCLGYCEFSFKD*LGWKMF Trigger: GAACATTTTCCAGCCCAGTCAGTCTTTGAAGCTAAA...TTCACAATAGCCAAGACATGAAATCAACCTGTGTCCATCAACAGAGAAGTGGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641181.1 |
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| CDS-3UTR GCA 90 bp | ATCCACTTCTCTGTTGATGGACACAGGTTGATTTCATGTCTTGGCTATTGTGAACCATCTGAATTAAGTTaGCTTGAATCAACCTGCACC | + |
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Preference number: 4 (lower is better) Translates to: IHFSVDGHRLISCLGYCEPSELS*LESTCT Trigger: GGTGCAGGTTGATTCAAGGCAACTTAATTCAGATGG...TTCACAATAGCCAAGACATGAAATCAACCTGTGTCCATCAACAGAGAAGTGGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641181.1 |
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| CDS-3UTR TCA 90 bp | ATCCACTTCTCTGTTGATGGACACAGGTTGATTTCATGTCTTGGCTATTGTGAATTGATGGACACAGGTTaGTTTCATGTCTTGGCTATT | + |
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Preference number: 4 (lower is better) Translates to: IHFSVDGHRLISCLGYCELMDTG*FHVLAI Trigger: AATAGCCAAGACATGAAATCAACCTGTGTCCATCAA...TTCACAATAGCCAAGACATGAAATCAACCTGTGTCCATCAACAGAGAAGTGGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641181.1 |
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| CDS-3UTR CCA 90 bp | AATTGGTTGACATTTAACTGGGAAAGCCATACCATATACCAACTAGCTCCTGCAACGCTTAACCAAGAATaGGAAAGGAATCATCAGCAA | + |
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Preference number: 4 (lower is better) Translates to: NWLTFNWESHTIYQLAPATLNQE*ERNHQQ Trigger: TTGCTGATGATTCCTTTCCCATTCTTGGTTAAGCGT...TGCAGGAGCTAGTTGGTATATGGTATGGCTTTCCCAGTTAAATGTCAACCAATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641181.1 |
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| CDS-3UTR TCA 90 bp | AATTGGTTGACATTTAACTGGGAAAGCCATACCATATACCAACTAGCTCCTGCAACTCCTCATAATAAATaGGGTACACAAGACCAAGAT | + |
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Preference number: 4 (lower is better) Translates to: NWLTFNWESHTIYQLAPATPHNK*GTQDQD Trigger: ATCTTGGTCTTGTGTACCTCATTTATTATGAGGAGT...TGCAGGAGCTAGTTGGTATATGGTATGGCTTTCCCAGTTAAATGTCAACCAATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641181.1 |
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| CDS-3UTR TCA 90 bp | AACCTAATTTTAGCTTCAAAGACTGACTGGGCTGGAAAATGTTCTATAGGAAAGCCTGGAAGAACTTTATaGCACTCTTGCGTATCTGTT | + |
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Preference number: 4 (lower is better) Translates to: NLILASKTDWAGKCSIGKPGRTL*HSCVSV Trigger: AACAGATACGCAAGAGTGTCATAAAGTTCTTCCAGG...CTTTCCTATAGAACATTTTCCAGCCCAGTCAGTCTTTGAAGCTAAAATTAGGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641181.1 |
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| CDS-3UTR GCA 90 bp | CTAATTTTAGCTTCAAAGACTGACTGGGCTGGAAAATGTTCTATAGGAAAGATTATCCACATCAAGATATaGTGCAGCTTACGACCTTGT | + |
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Preference number: 4 (lower is better) Translates to: LILASKTDWAGKCSIGKIIHIKI*CSLRPC Trigger: ACAAGGTCGTAAGCTGCAGCATATCTTGATGTGGAT...AATCTTTCCTATAGAACATTTTCCAGCCCAGTCAGTCTTTGAAGCTAAAATTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641181.1 |
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| CDS-3UTR CCA 90 bp | CTAATTTTAGCTTCAAAGACTGACTGGGCTGGAAAATGTTCTATAGGAAAGATTTGGTCGCAGTACGTATaGGAGATAATATTGCTTTGG | + |
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Preference number: 4 (lower is better) Translates to: LILASKTDWAGKCSIGKIWSQYV*EIILLW Trigger: CCAAAGCAATATTATCTCCCATACGTACTGCGACCA...AATCTTTCCTATAGAACATTTTCCAGCCCAGTCAGTCTTTGAAGCTAAAATTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641181.1 |
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| CDS-3UTR TCA 90 bp | CTAATTTTAGCTTCAAAGACTGACTGGGCTGGAAAATGTTCTATAGGAAAGATTATTTCACCAATTGGTTaGCATTTAACTGGGAAAGCC | + |
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Preference number: 4 (lower is better) Translates to: LILASKTDWAGKCSIGKIISPIG*HLTGKA Trigger: GGCTTTCCCAGTTAAATGTCAACCAATTGGTGAAAT...AATCTTTCCTATAGAACATTTTCCAGCCCAGTCAGTCTTTGAAGCTAAAATTAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641181.1 |
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| CDS-3UTR CCA 90 bp | CTAATTTTAGCTTCAAAGACTGACTGGGCTGGAAAATGTTCTATAGGAAAGATTGAGATAATATTGCTTTaGCAGAAAGGCAAACGCTTA | + |
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Preference number: 4 (lower is better) Translates to: LILASKTDWAGKCSIGKIEIILL*QKGKRL Trigger: TAAGCGTTTGCCTTTCTGCCAAAGCAATATTATCTC...AATCTTTCCTATAGAACATTTTCCAGCCCAGTCAGTCTTTGAAGCTAAAATTAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641181.1 |
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| CDS-3UTR CCA 90 bp | CTAATTTTAGCTTCAAAGACTGACTGGGCTGGAAAATGTTCTATAGGAAAGATTTTGTCTTTCTGTGGCTaGCTTATTTCATTTAACATG | + |
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Preference number: 4 (lower is better) Translates to: LILASKTDWAGKCSIGKILSFCG*LISFNM Trigger: CATGTTAAATGAAATAAGCCAGCCACAGAAAGACAA...AATCTTTCCTATAGAACATTTTCCAGCCCAGTCAGTCTTTGAAGCTAAAATTAG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000641181.1 |
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| CDS TCA 90 bp | TGTTGCATCCTGTGCGGCCTCCTCATCCCACGCTGGGCAGCCATTTaGCACAAAATACATGTAGCATCCATGGTTGCCTCTGGCCACAAT | + |
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Preference number: 5 (lower is better) Translates to: CCILCGLLIPRWAAI*HKIHVASMVASGHN Trigger: ATTGTGGCCAGAGGCAACCATGGATGCTACATGTATTTTGTGTCAAATGGCTGCCCAGCGTGGGATGAGGAGGCCGCACAGGATGCAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641181.1 |
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| CDS-3UTR CAA 90 bp | ATCCACTTCTCTGTTGATGGACACAGGTTGATTTCATGTCTTGGCTATTGTGAAGTGGCAAGCTCAGCCTaGGCAATGATAGGGTTGGTG | + |
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Preference number: 5 (lower is better) Translates to: IHFSVDGHRLISCLGYCEVASSA*AMIGLV Trigger: CACCAACCCTATCATTGCCAAGGCTGAGCTTGCCAC...TTCACAATAGCCAAGACATGAAATCAACCTGTGTCCATCAACAGAGAAGTGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641181.1 |
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| CDS-3UTR CAA 90 bp | ATCCACTTCTCTGTTGATGGACACAGGTTGATTTCATGTCTTGGCTATTGTGAATTGATCCTATCACTGTaGCATCCTGTGCGGCCTCCT | + |
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Preference number: 5 (lower is better) Translates to: IHFSVDGHRLISCLGYCELILSL*HPVRPP Trigger: AGGAGGCCGCACAGGATGCAACAGTGATAGGATCAA...TTCACAATAGCCAAGACATGAAATCAACCTGTGTCCATCAACAGAGAAGTGGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641181.1 |
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| CDS-3UTR CAA 90 bp | AACCTAATTTTAGCTTCAAAGACTGACTGGGCTGGAAAATGTTCTATAGGAAAGAAGATGCAGAGTGCATaGGGTAGAGTGGTGGTGCAG | + |
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Preference number: 5 (lower is better) Translates to: NLILASKTDWAGKCSIGKKMQSA*GRVVVQ Trigger: CTGCACCACCACTCTACCCAATGCACTCTGCATCTT...CTTTCCTATAGAACATTTTCCAGCCCAGTCAGTCTTTGAAGCTAAAATTAGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641181.1 |
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| CDS-3UTR CAA 90 bp | ATCCACTTCTCTGTTGATGGACACAGGTTGATTTCATGTCTTGGCTATTGTGAACTGCAGCTTACGACCTaGTGTCAATCACAATTGCTT | + |
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Preference number: 5 (lower is better) Translates to: IHFSVDGHRLISCLGYCELQLTT*CQSQLL Trigger: AAGCAATTGTGATTGACACAAGGTCGTAAGCTGCAG...TTCACAATAGCCAAGACATGAAATCAACCTGTGTCCATCAACAGAGAAGTGGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641181.1 |
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| CDS-3UTR CAA 90 bp | AACCTAATTTTAGCTTCAAAGACTGACTGGGCTGGAAAATGTTCTATAGGAAAGACGCTGGGCAGCCATTaGACACAAAATACATGTAGC | + |
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Preference number: 5 (lower is better) Translates to: NLILASKTDWAGKCSIGKTLGSH*TQNTCS Trigger: GCTACATGTATTTTGTGTCAAATGGCTGCCCAGCGT...CTTTCCTATAGAACATTTTCCAGCCCAGTCAGTCTTTGAAGCTAAAATTAGGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000641181.1 |
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| CDS-3UTR CAA 90 bp | ATCCACTTCTCTGTTGATGGACACAGGTTGATTTCATGTCTTGGCTATTGTGAAATTGCTTGTCCATCCTaGATGACAATGAGTTCCATT | + |
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Preference number: 5 (lower is better) Translates to: IHFSVDGHRLISCLGYCEIACPS*MTMSSI Trigger: AATGGAACTCATTGTCATCAAGGATGGACAAGCAAT...TTCACAATAGCCAAGACATGAAATCAACCTGTGTCCATCAACAGAGAAGTGGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641181.1 |
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| CDS-3UTR CAA 90 bp | AATTGGTTGACATTTAACTGGGAAAGCCATACCATATACCAACTAGCTCCTGCACATTTCACCAATTGGTaGACATTTAACTGGGAAAGC | + |
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Preference number: 5 (lower is better) Translates to: NWLTFNWESHTIYQLAPAHFTNW*TFNWES Trigger: GCTTTCCCAGTTAAATGTCAACCAATTGGTGAAATG...TGCAGGAGCTAGTTGGTATATGGTATGGCTTTCCCAGTTAAATGTCAACCAATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641181.1 |
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| CDS GCA 90 bp | TCATTTATCTTTCTTCCATCTGAATTAAGTTGCCTTGAATCAACCTaGACCCTTATCACCCTGGAAGAACTTTATGACACTCTTGCGTAT | + |
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Preference number: 5 (lower is better) Translates to: SFIFLPSELSCLEST*TLITLEELYDTLAY Trigger: ATACGCAAGAGTGTCATAAAGTTCTTCCAGGGTGATAAGGGTGCAGGTTGATTCAAGGCAACTTAATTCAGATGGAAGAAAGATAAATGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641181.1 |
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| CDS-3UTR CAA 90 bp | AATTGGTTGACATTTAACTGGGAAAGCCATACCATATACCAACTAGCTCCTGCAGAGTCACATGAATTGTaGGAAACCAGCATAATGAAT | + |
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Preference number: 5 (lower is better) Translates to: NWLTFNWESHTIYQLAPAESHEL*ETSIMN Trigger: ATTCATTATGCTGGTTTCCAACAATTCATGTGACTC...TGCAGGAGCTAGTTGGTATATGGTATGGCTTTCCCAGTTAAATGTCAACCAATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641181.1 |
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| CDS-3UTR CAA 90 bp | AATTGGTTGACATTTAACTGGGAAAGCCATACCATATACCAACTAGCTCCTGCAATTCATACCAACGACTaGATTAAAACGGGCAATGTA | + |
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Preference number: 5 (lower is better) Translates to: NWLTFNWESHTIYQLAPAIHTND*IKTGNV Trigger: TACATTGCCCGTTTTAATCAAGTCGTTGGTATGAAT...TGCAGGAGCTAGTTGGTATATGGTATGGCTTTCCCAGTTAAATGTCAACCAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641181.1 |
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| CDS-3UTR CAA 90 bp | CTAATTTTAGCTTCAAAGACTGACTGGGCTGGAAAATGTTCTATAGGAAAGATTGAGGAGTCACATGAATaGTTGGAAACCAGCATAATG | + |
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Preference number: 5 (lower is better) Translates to: LILASKTDWAGKCSIGKIEESHE*LETSIM Trigger: CATTATGCTGGTTTCCAACAATTCATGTGACTCCTC...AATCTTTCCTATAGAACATTTTCCAGCCCAGTCAGTCTTTGAAGCTAAAATTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641181.1 |
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| CDS-3UTR CAA 90 bp | CTAATTTTAGCTTCAAAGACTGACTGGGCTGGAAAATGTTCTATAGGAAAGATTGGAGATAATATTGCTTaGGCAGAAAGGCAAACGCTT | + |
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Preference number: 5 (lower is better) Translates to: LILASKTDWAGKCSIGKIGDNIA*AERQTL Trigger: AAGCGTTTGCCTTTCTGCCAAAGCAATATTATCTCC...AATCTTTCCTATAGAACATTTTCCAGCCCAGTCAGTCTTTGAAGCTAAAATTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641181.1 |
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| CDS-3UTR CAA 90 bp | CTAATTTTAGCTTCAAAGACTGACTGGGCTGGAAAATGTTCTATAGGAAAGATTTGGGCCAAGCAAGCATaGAAGTTAATTTCTTTGAGA | + |
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Preference number: 5 (lower is better) Translates to: LILASKTDWAGKCSIGKIWAKQA*KLISLR Trigger: TCTCAAAGAAATTAACTTCAATGCTTGCTTGGCCCA...AATCTTTCCTATAGAACATTTTCCAGCCCAGTCAGTCTTTGAAGCTAAAATTAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641181.1 |
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| CDS TCA 90 bp | TCCAGACCAGGTATTCCATTAAGAATAAAAGATGGAGGAGTCACATaGATTGTTGGAAACCAGCATAATGAATTAAATAGAGGCATTCTA | + |
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Preference number: 5 (lower is better) Translates to: SRPGIPLRIKDGGVT*IVGNQHNELNRGIL Trigger: TAGAATGCCTCTATTTAATTCATTATGCTGGTTTCCAACAATTCATGTGACTCCTCCATCTTTTATTCTTAATGGAATACCTGGTCTGGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000317093.2 ENST00000641181.1 |
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| CDS TCA 72 bp | TCCACGCCTCCAGTATCTGGTGAAGGGTGGAGTGATTaGTCCTATCACTGTTGCATCCTGTGCGGCCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: STPPVSGEGWSD*SYHCCILCGLL Trigger: GAGGAGGCCGCACAGGATGCAACAGTGATAGGATCAATCACTCCACCCTTCACCAGATACTGGAGGCGTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641181.1 |
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| CDS TCA 72 bp | GTTGCCTCTGGCCACAATATAGCTCCTGAGGAGAAGTaGTGTGAAAGGTGTTCATGCCAGGGAGAGGGCCCA | + |
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Preference number: 6 (lower is better) Translates to: VASGHNIAPEEK*CERCSCQGEGP Trigger: TGGGCCCTCTCCCTGGCATGAACACCTTTCACATCACTTCTCCTCAGGAGCTATATTGTGGCCAGAGGCAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641181.1 |
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| CDS TCA 72 bp | CTGTGCGGCCTCCTCATCCCACGCTGGGCAGCCATTTaGCACAAAATACATGTAGCATCCATGGTTGCCTCT | + |
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Preference number: 6 (lower is better) Translates to: LCGLLIPRWAAI*HKIHVASMVAS Trigger: AGAGGCAACCATGGATGCTACATGTATTTTGTGTCAAATGGCTGCCCAGCGTGGGATGAGGAGGCCGCACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641181.1 |
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| CDS TCA 72 bp | GCTTGTCCATCCTTGATGACAATGAGTTCCATTACCTaGTGTAGATGTCCACGCCTCCAGTATCTGGTGAAG | + |
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Preference number: 6 (lower is better) Translates to: ACPSLMTMSSIT*CRCPRLQYLVK Trigger: CTTCACCAGATACTGGAGGCGTGGACATCTACATCAGGTAATGGAACTCATTGTCATCAAGGATGGACAAGC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641181.1 |
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| CDS TCA 72 bp | ATCAACCTGCACCCTTATCACCCTGGAAGAACTTTATaGCACTCTTGCGTATCTGTTTTGTCTTTACTCCAT | + |
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Preference number: 6 (lower is better) Translates to: INLHPYHPGRTL*HSCVSVLSLLH Trigger: ATGGAGTAAAGACAAAACAGATACGCAAGAGTGTCATAAAGTTCTTCCAGGGTGATAAGGGTGCAGGTTGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000317093.2 ENST00000641181.1 |
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| CDS TCA 72 bp | AATACATCGGATGATGTAAGGACTCCTCATAATAAATaGGGTACACAAGACCAAGATTCCCCACAAGGAAGA | + |
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Preference number: 6 (lower is better) Translates to: NTSDDVRTPHNK*GTQDQDSPQGR Trigger: TCTTCCTTGTGGGGAATCTTGGTCTTGTGTACCTCATTTATTATGAGGAGTCCTTACATCATCCGATGTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000317093.2 ENST00000641181.1 |
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| CDS GCA 72 bp | TTTCTTCCATCTGAATTAAGTTGCCTTGAATCAACCTaGACCCTTATCACCCTGGAAGAACTTTATGACACT | + |
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Preference number: 6 (lower is better) Translates to: FLPSELSCLEST*TLITLEELYDT Trigger: AGTGTCATAAAGTTCTTCCAGGGTGATAAGGGTGCAGGTTGATTCAAGGCAACTTAATTCAGATGGAAGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641181.1 |
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| CDS GCA 72 bp | TATTTTTCCAGAAGTTTCATCCACATCAAGATATGCTaGAGCTTACGACCTTGTGTCAATCACAATTGCTTG | + |
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Preference number: 6 (lower is better) Translates to: YFSRSFIHIKIC*SLRPCVNHNCL Trigger: CAAGCAATTGTGATTGACACAAGGTCGTAAGCTGCAGCATATCTTGATGTGGATGAAACTTCTGGAAAAATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000641181.1 |
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