RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OR52K1 (Homo sapiens)

Ensembl gene IDs: ENSG00000196778

Ensembl transcript IDs: ENST00000641528.1, ENST00000642020.1

Found 231 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CACAGCCATCTGGAGGCCACAGCATCCAGCATCCCTGTGATGCTGTaGTTCAGCAGTCACGCTCCTGTTTCACTTTCACGTTCCACCCTG +
Preference number: 1 (lower is better)
Translates to: HSHLEATASSIPVML*FSSHAPVSLSRSTL
Trigger: CAGGGTGGAACGTGAAAGTGAAACAGGAGCGTGACTGCTGAAGCACAGCATCACAGGGATGCTGGATGCTGTGGCCTCCAGATGGCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
3UTR CCA 90 bp AGCAGTCACGCTCCTGTTTCACTTTCACGTTCCACCCTGTACACCTaGCTCTGCCTTCCAGATAGCAGTAGCAGAATAAGTGAAAGTACT +
Preference number: 1 (lower is better)
Translates to: SSHAPVSLSRSTLYT*LCLPDSSSRISEST
Trigger: AGTACTTTCACTTATTCTGCTACTGCTATCTGGAAGGCAGAGCCAGGTGTACAGGGTGGAACGTGAAAGTGAAACAGGAGCGTGACTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
3UTR GCA 90 bp CACGCTCCTGTTTCACTTTCACGTTCCACCCTGTACACCTGGCTCTaGCTTCCAGATAGCAGTAGCAGAATAAGTGAAAGTACTAAAAGT +
Preference number: 1 (lower is better)
Translates to: HAPVSLSRSTLYTWL*LPDSSSRISESTKS
Trigger: ACTTTTAGTACTTTCACTTATTCTGCTACTGCTATCTGGAAGGCAGAGCCAGGTGTACAGGGTGGAACGTGAAAGTGAAACAGGAGCGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
3UTR CCA 90 bp GAGGTACATTTCCTCACTCATACCTGGATAAAGAAGTCACCTGTTTaGGTGACTCAGCTGTTTGGGCCAATCTCAGCCAATAAAGGTCCT +
Preference number: 1 (lower is better)
Translates to: EVHFLTHTWIKKSPV*VTQLFGPISANKGP
Trigger: AGGACCTTTATTGGCTGAGATTGGCCCAAACAGCTGAGTCACCCAAACAGGTGACTTCTTTATCCAGGTATGAGTGAGGAAATGTACCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
3UTR TCA 90 bp TACCACTTTGAGAGGTTTGTCTTCCTTAGCCATGTGATGAGTCTATaGCAATGGGAAGGTCAAACCTCTACTATCAGACCAGACTATAGG +
Preference number: 1 (lower is better)
Translates to: YHFERFVFLSHVMSL*QWEGQTSTIRPDYR
Trigger: CCTATAGTCTGGTCTGATAGTAGAGGTTTGACCTTCCCATTGTCATAGACTCATCACATGGCTAAGGAAGACAAACCTCTCAAAGTGGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
3UTR CCA 90 bp TTAGCAGCTCAAACACAATTTCTCATTTACACTTCTTACTCATTGTaGGTGGACTTTGGCTTTGTCACAGCCTCTAACTGGAACTTTGCT +
Preference number: 1 (lower is better)
Translates to: LAAQTQFLIYTSYSL*VDFGFVTASNWNFA
Trigger: AGCAAAGTTCCAGTTAGAGGCTGTGACAAAGCCAAAGTCCACCCACAATGAGTAAGAAGTGTAAATGAGAAATTGTGTTTGAGCTGCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
3UTR GCA 90 bp TGTATTTCCTTTAAATATTCAGTCTTGAGCTGTCATGAGTTGAAATaGAAGATAGAACTCACAACTCCAGCAATTGGTGCTCCTTGGGTA +
Preference number: 1 (lower is better)
Translates to: CISFKYSVLSCHELK*KIELTTPAIGAPWV
Trigger: TACCCAAGGAGCACCAATTGCTGGAGTTGTGAGTTCTATCTTGCATTTCAACTCATGACAGCTCAAGACTGAATATTTAAAGGAAATACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
3UTR GCA 90 bp CATCCATGTTCCTGCAAAGGACATGATCTTATTCTTTTTGACGGCTaGATAGTATTCCATGGTGCATATGTATCACATTTTCTTTATCCA +
Preference number: 1 (lower is better)
Translates to: HPCSCKGHDLILFDG*IVFHGAYVSHFLYP
Trigger: TGGATAAAGAAAATGTGATACATATGCACCATGGAATACTATGCAGCCGTCAAAAAGAATAAGATCATGTCCTTTGCAGGAACATGGATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
3UTR-3UTR TCA 90 bp GTCCTCTCTCTCTCTCCTTCTTGGCTGCCAAACAGGGAAGGGCCCCCTGTCCAGGATGGGGATACATTCTaGGAAATGTGTCCTCAGGTG +
Preference number: 2 (lower is better)
Translates to: VLSLSPSWLPNREGPPVQDGDTF*EMCPQV
Trigger: CACCTGAGGACACATTTCTCAGAATGTATCCCCATC...CTGGACAGGGGGCCCTTCCCTGTTTGGCAGCCAAGAAGGAGAGAGAGAGAGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
3UTR-3UTR TCA 90 bp GTCCTCTCTCTCTCTCCTTCTTGGCTGCCAAACAGGGAAGGGCCCCCTGTCCAGGATAGTTATTTTTCCTaGTCCTCTCCCTCCTACCTT +
Preference number: 2 (lower is better)
Translates to: VLSLSPSWLPNREGPPVQDSYFS*SSPSYL
Trigger: AAGGTAGGAGGGAGAGGATCAGGAAAAATAACTATC...CTGGACAGGGGGCCCTTCCCTGTTTGGCAGCCAAGAAGGAGAGAGAGAGAGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
3UTR-3UTR CCA 90 bp GTCCTCTCTCTCTCTCCTTCTTGGCTGCCAAACAGGGAAGGGCCCCCTGTCCAGTTCACATCTGCTCCATaGATCTTCATCATGAGTCTA +
Preference number: 2 (lower is better)
Translates to: VLSLSPSWLPNREGPPVQFTSAP*IFIMSL
Trigger: TAGACTCATGATGAAGATCCATGGAGCAGATGTGAA...CTGGACAGGGGGCCCTTCCCTGTTTGGCAGCCAAGAAGGAGAGAGAGAGAGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
3UTR-3UTR GCA 90 bp ATGATCTCTCATCTCTGCACACAAGGGGAAAAACTCACAGACCCTGTAGGGCTGAACTCCAGCAATTGGTaGTCCTTGGGTAAGGCTGTG +
Preference number: 2 (lower is better)
Translates to: MISHLCTQGEKLTDPVGLNSSNW*SLGKAV
Trigger: CACAGCCTTACCCAAGGAGCACCAATTGCTGGAGTT...CAGCCCTACAGGGTCTGTGAGTTTTTCCCCTTGTGTGCAGAGATGAGAGATCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
3UTR-3UTR TCA 90 bp ATGATCTCTCATCTCTGCACACAAGGGGAAAAACTCACAGACCCTGTAGGGCTGGATGGGGATACATTCTaGGAAATGTGTCCTCAGGTG +
Preference number: 2 (lower is better)
Translates to: MISHLCTQGEKLTDPVGLDGDTF*EMCPQV
Trigger: CACCTGAGGACACATTTCTCAGAATGTATCCCCATC...CAGCCCTACAGGGTCTGTGAGTTTTTCCCCTTGTGTGCAGAGATGAGAGATCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
3UTR-3UTR CCA 90 bp ATGATCTCTCATCTCTGCACACAAGGGGAAAAACTCACAGACCCTGTAGGGCTGGTCACAGCCTCTAACTaGAACTTTGCTGGGTTTTGC +
Preference number: 2 (lower is better)
Translates to: MISHLCTQGEKLTDPVGLVTASN*NFAGFC
Trigger: GCAAAACCCAGCAAAGTTCCAGTTAGAGGCTGTGAC...CAGCCCTACAGGGTCTGTGAGTTTTTCCCCTTGTGTGCAGAGATGAGAGATCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
3UTR-3UTR TCA 90 bp ATGATCTCTCATCTCTGCACACAAGGGGAAAAACTCACAGACCCTGTAGGGCTGCATGAGTCTAGGCTGTaGTACGCTTATTCTTCTGGT +
Preference number: 2 (lower is better)
Translates to: MISHLCTQGEKLTDPVGLHESRL*YAYSSG
Trigger: ACCAGAAGAATAAGCGTATCACAGCCTAGACTCATG...CAGCCCTACAGGGTCTGTGAGTTTTTCCCCTTGTGTGCAGAGATGAGAGATCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
3UTR-3UTR CCA 90 bp TCAACCATTGGAGATGACTCACACTCTTTACCCTGCCCCTTTTGCCTTGTATCCAAGAAGTCACCTGTTTaGGTGACTCAGCTGTTTGGG +
Preference number: 2 (lower is better)
Translates to: STIGDDSHSLPCPFCLVSKKSPV*VTQLFG
Trigger: CCCAAACAGCTGAGTCACCCAAACAGGTGACTTCTT...GGATACAAGGCAAAAGGGGCAGGGTAAAGAGTGTGAGTCATCTCCAATGGTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
3UTR-3UTR TCA 90 bp ATGATCTCTCATCTCTGCACACAAGGGGAAAAACTCACAGACCCTGTAGGGCTGAGTCTTGAGCTGTCATaGGTTGAAATGCAAGATAGA +
Preference number: 2 (lower is better)
Translates to: MISHLCTQGEKLTDPVGLSLELS*VEMQDR
Trigger: TCTATCTTGCATTTCAACTCATGACAGCTCAAGACT...CAGCCCTACAGGGTCTGTGAGTTTTTCCCCTTGTGTGCAGAGATGAGAGATCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
3UTR-3UTR CCA 90 bp AGAAATAATGGTGTAAGCTGTCCTCTCTCTCTCTCCTTCTTGGCTGCCAAACAGAAGAGTGGCAAAGGGTaGAGGGTACTTGTCAGAAAA +
Preference number: 2 (lower is better)
Translates to: RNNGVSCPLSLSFLAAKQKSGKG*RVLVRK
Trigger: TTTTCTGACAAGTACCCTCCACCCTTTGCCACTCTT...CTGTTTGGCAGCCAAGAAGGAGAGAGAGAGAGGACAGCTTACACCATTATTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
3UTR-3UTR CCA 90 bp AGAAGAAATAATGGTGTAAGCTGTCCTCTCTCTCTCTCCTTCTTGGCTGCCAAACTTACTCATTGTGGGTaGACTTTGGCTTTGTCACAG +
Preference number: 2 (lower is better)
Translates to: RRNNGVSCPLSLSFLAAKLTHCG*TLALSQ
Trigger: CTGTGACAAAGCCAAAGTCCACCCACAATGAGTAAG...TTTGGCAGCCAAGAAGGAGAGAGAGAGAGGACAGCTTACACCATTATTTCTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
3UTR-3UTR TCA 90 bp AACACAATTTCTCATTTACACTTCTTACTCATTGTGGGTGGACTTTGGCTTTGTAGTCACCTGTTTGGGTaGCTCAGCTGTTTGGGCCAA +
Preference number: 2 (lower is better)
Translates to: NTISHLHFLLIVGGLWLCSHLFG*LSCLGQ
Trigger: TTGGCCCAAACAGCTGAGTCACCCAAACAGGTGACT...ACAAAGCCAAAGTCCACCCACAATGAGTAAGAAGTGTAAATGAGAAATTGTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
3UTR-3UTR TCA 90 bp TCTGTTTTTAGGTCTTTGAGGAATCACCTACTGCTTTCCATAATGGGTGAAATAAGTCACCTGTTTGGGTaGCTCAGCTGTTTGGGCCAA +
Preference number: 2 (lower is better)
Translates to: SVFRSLRNHLLLSIMGEISHLFG*LSCLGQ
Trigger: TTGGCCCAAACAGCTGAGTCACCCAAACAGGTGACT...TATTTCACCCATTATGGAAAGCAGTAGGTGATTCCTCAAAGACCTAAAAACAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
3UTR-3UTR GCA 90 bp AGAAATAATGGTGTAAGCTGTCCTCTCTCTCTCTCCTTCTTGGCTGCCAAACAGCTCCATCCATGTTCCTaGAAAGGACATGATCTTATT +
Preference number: 2 (lower is better)
Translates to: RNNGVSCPLSLSFLAAKQLHPCS*KGHDLI
Trigger: AATAAGATCATGTCCTTTGCAGGAACATGGATGGAG...CTGTTTGGCAGCCAAGAAGGAGAGAGAGAGAGGACAGCTTACACCATTATTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
3UTR-3UTR CCA 90 bp ACCTGTGAACATCATAGAGTGTATTTACACAAACCTAGATGGTATCGCTTGCTAAAGAAGTCACCTGTTTaGGTGACTCAGCTGTTTGGG +
Preference number: 2 (lower is better)
Translates to: TCEHHRVYLHKPRWYRLLKKSPV*VTQLFG
Trigger: CCCAAACAGCTGAGTCACCCAAACAGGTGACTTCTT...TAGCAAGCGATACCATCTAGGTTTGTGTAAATACACTCTATGATGTTCACAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
3UTR CAA 90 bp AAACACAATTTCTCATTTACACTTCTTACTCATTGTGGGTGGACTTaGGCTTTGTCACAGCCTCTAACTGGAACTTTGCTGGGTTTTGCA +
Preference number: 2 (lower is better)
Translates to: KHNFSFTLLTHCGWT*ALSQPLTGTLLGFA
Trigger: TGCAAAACCCAGCAAAGTTCCAGTTAGAGGCTGTGACAAAGCCAAAGTCCACCCACAATGAGTAAGAAGTGTAAATGAGAAATTGTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
3UTR-3UTR TCA 90 bp TCCTTGTTCATGTTATATGAACACTGTGGGTCAGTTATGACTATGCTACAGGCAGATAGTTATTTTTCCTaGTCCTCTCCCTCCTACCTT +
Preference number: 2 (lower is better)
Translates to: SLFMLYEHCGSVMTMLQADSYFS*SSPSYL
Trigger: AAGGTAGGAGGGAGAGGATCAGGAAAAATAACTATC...TGCCTGTAGCATAGTCATAACTGACCCACAGTGTTCATATAACATGAACAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
3UTR-3UTR CCA 90 bp TATGTATCACACACCTCTGCAATAACACGTGTCTATATGGACCAGGCAACTTCTTTCCTCACTCATACCTaGATAAAGAAGTCACCTGTT +
Preference number: 2 (lower is better)
Translates to: YVSHTSAITRVYMDQATSFLTHT*IKKSPV
Trigger: AACAGGTGACTTCTTTATCCAGGTATGAGTGAGGAA...AGAAGTTGCCTGGTCCATATAGACACGTGTTATTGCAGAGGTGTGTGATACATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
3UTR-3UTR TCA 90 bp AACTTGTGTCACGGGAGTTTGTTGTACAAGTTCTTTAATCACCTAGGTACTAGGCTGTTTTTAGGTCTTTaGGGAATCACCTACTGCTTT +
Preference number: 2 (lower is better)
Translates to: NLCHGSLLYKFFNHLGTRLFLGL*GITYCF
Trigger: AAAGCAGTAGGTGATTCCTCAAAGACCTAAAAACAG...CCTAGTACCTAGGTGATTAAAGAACTTGTACAACAAACTCCCGTGACACAAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
3UTR-3UTR GCA 90 bp AGGAATCACCTACTGCTTTCCATAATGGGTGAAATAATTTACACTCCTACCAGCTGGAGGCAAAAGACATaGAGTGAAAAGCTAGATACA +
Preference number: 2 (lower is better)
Translates to: RNHLLLSIMGEIIYTPTSWRQKT*SEKLDT
Trigger: TGTATCTAGCTTTTCACTGCATGTCTTTTGCCTCCA...GCTGGTAGGAGTGTAAATTATTTCACCCATTATGGAAAGCAGTAGGTGATTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
3UTR-3UTR GCA 90 bp TATGTATCACACACCTCTGCAATAACACGTGTCTATATGGACCAGGCAACTTCTTTTCCATTCGATCTTTaGACCAATATCATAGTGTCC +
Preference number: 2 (lower is better)
Translates to: YVSHTSAITRVYMDQATSFPFDL*TNIIVS
Trigger: GGACACTATGATATTGGTGCAAAGATCGAATGGAAA...AGAAGTTGCCTGGTCCATATAGACACGTGTTATTGCAGAGGTGTGTGATACATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
3UTR-3UTR CCA 90 bp AGAAGAAATAATGGTGTAAGCTGTCCTCTCTCTCTCTCCTTCTTGGCTGCCAAACTACTCAAATTTCATTaGCCAAATCAAGTCATACAG +
Preference number: 2 (lower is better)
Translates to: RRNNGVSCPLSLSFLAAKLLKFH*PNQVIQ
Trigger: CTGTATGACTTGATTTGGCCAATGAAATTTGAGTAG...TTTGGCAGCCAAGAAGGAGAGAGAGAGAGGACAGCTTACACCATTATTTCTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
3UTR CAA 90 bp GAAGACTGTATTTCCTTTAAATATTCAGTCTTGAGCTGTCATGAGTaGAAATGCAAGATAGAACTCACAACTCCAGCAATTGGTGCTCCT +
Preference number: 2 (lower is better)
Translates to: EDCISFKYSVLSCHE*KCKIELTTPAIGAP
Trigger: AGGAGCACCAATTGCTGGAGTTGTGAGTTCTATCTTGCATTTCAACTCATGACAGCTCAAGACTGAATATTTAAAGGAAATACAGTCTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
3UTR-3UTR TCA 90 bp AACTTGTGTCACGGGAGTTTGTTGTACAAGTTCTTTAATCACCTAGGTACTAGGGCTTTCCATAATGGGTaGAATAATTTACACTCCTAC +
Preference number: 2 (lower is better)
Translates to: NLCHGSLLYKFFNHLGTRAFHNG*NNLHSY
Trigger: GTAGGAGTGTAAATTATTTCACCCATTATGGAAAGC...CCTAGTACCTAGGTGATTAAAGAACTTGTACAACAAACTCCCGTGACACAAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
3UTR-3UTR GCA 90 bp CAGTCAAATGGTATTTCTGTTTTTAGGTCTTTGAGGAATCACCTACTGCTTTCCTGGAGGCAAAAGACATaGAGTGAAAAGCTAGATACA +
Preference number: 2 (lower is better)
Translates to: QSNGISVFRSLRNHLLLSWRQKT*SEKLDT
Trigger: TGTATCTAGCTTTTCACTGCATGTCTTTTGCCTCCA...GGAAAGCAGTAGGTGATTCCTCAAAGACCTAAAAACAGAAATACCATTTGACTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
3UTR-3UTR GCA 90 bp TCCTTGTTCATGTTATATGAACACTGTGGGTCAGTTATGACTATGCTACAGGCATTTCCATTCGATCTTTaGACCAATATCATAGTGTCC +
Preference number: 2 (lower is better)
Translates to: SLFMLYEHCGSVMTMLQAFPFDL*TNIIVS
Trigger: GGACACTATGATATTGGTGCAAAGATCGAATGGAAA...TGCCTGTAGCATAGTCATAACTGACCCACAGTGTTCATATAACATGAACAAGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
3UTR-3UTR CCA 90 bp CAGTCAAATGGTATTTCTGTTTTTAGGTCTTTGAGGAATCACCTACTGCTTTCCCAGGAGACTAAATATTaGTGGACAGTAATACAGTCT +
Preference number: 2 (lower is better)
Translates to: QSNGISVFRSLRNHLLLSQETKY*WTVIQS
Trigger: AGACTGTATTACTGTCCACCAATATTTAGTCTCCTG...GGAAAGCAGTAGGTGATTCCTCAAAGACCTAAAAACAGAAATACCATTTGACTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
3UTR-3UTR CCA 90 bp TCCTTGTTCATGTTATATGAACACTGTGGGTCAGTTATGACTATGCTACAGGCACTACTCAAATTTCATTaGCCAAATCAAGTCATACAG +
Preference number: 2 (lower is better)
Translates to: SLFMLYEHCGSVMTMLQALLKFH*PNQVIQ
Trigger: CTGTATGACTTGATTTGGCCAATGAAATTTGAGTAG...TGCCTGTAGCATAGTCATAACTGACCCACAGTGTTCATATAACATGAACAAGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
3UTR-3UTR CCA 90 bp AAAGTTAATGCACACTTTAATTTGCAAAGAATAATGGCCTCTAGCTCCATCCATTTCCTCACTCATACCTaGATAAAGAAGTCACCTGTT +
Preference number: 2 (lower is better)
Translates to: KVNAHFNLQRIMASSSIHFLTHT*IKKSPV
Trigger: AACAGGTGACTTCTTTATCCAGGTATGAGTGAGGAA...ATGGATGGAGCTAGAGGCCATTATTCTTTGCAAATTAAAGTGTGCATTAACTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
3UTR-3UTR CCA 90 bp CAGTCAAATGGTATTTCTGTTTTTAGGTCTTTGAGGAATCACCTACTGCTTTCCGAGACTAAATATTGGTaGACAGTAATACAGTCTATC +
Preference number: 2 (lower is better)
Translates to: QSNGISVFRSLRNHLLLSETKYW*TVIQSI
Trigger: GATAGACTGTATTACTGTCCACCAATATTTAGTCTC...GGAAAGCAGTAGGTGATTCCTCAAAGACCTAAAAACAGAAATACCATTTGACTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
3UTR-3UTR CCA 90 bp AACACAATTTCTCATTTACACTTCTTACTCATTGTGGGTGGACTTTGGCTTTGTCTGTATAGTATTCCATaGTGCATATGTATCACACAC +
Preference number: 2 (lower is better)
Translates to: NTISHLHFLLIVGGLWLCLYSIP*CICITH
Trigger: GTGTGTGATACATATGCACCATGGAATACTATACAG...ACAAAGCCAAAGTCCACCCACAATGAGTAAGAAGTGTAAATGAGAAATTGTGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
3UTR CAA 90 bp ACTCCCAAATTTCAGTGGTTCACTACAAAAACAACAAAATCATCCTaGTTCATGTTATATGAACACTGTGGGTCAGTTATGACTATGCTA +
Preference number: 2 (lower is better)
Translates to: TPKFQWFTTKTTKSS*FMLYEHCGSVMTML
Trigger: TAGCATAGTCATAACTGACCCACAGTGTTCATATAACATGAACAAGGATGATTTTGTTGTTTTTGTAGTGAACCACTGAAATTTGGGAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
3UTR-3UTR GCA 90 bp AAAGTTAATGCACACTTTAATTTGCAAAGAATAATGGCCTCTAGCTCCATCCATTGTATCACACACCTCTaGAATAACACGTGTCTATAT +
Preference number: 2 (lower is better)
Translates to: KVNAHFNLQRIMASSSIHCITHL*NNTCLY
Trigger: ATATAGACACGTGTTATTGCAGAGGTGTGTGATACA...ATGGATGGAGCTAGAGGCCATTATTCTTTGCAAATTAAAGTGTGCATTAACTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
3UTR-3UTR CCA 90 bp TCTGTTTTTAGGTCTTTGAGGAATCACCTACTGCTTTCCATAATGGGTGAAATAGAGACTAAATATTGGTaGACAGTAATACAGTCTATC +
Preference number: 2 (lower is better)
Translates to: SVFRSLRNHLLLSIMGEIETKYW*TVIQSI
Trigger: GATAGACTGTATTACTGTCCACCAATATTTAGTCTC...TATTTCACCCATTATGGAAAGCAGTAGGTGATTCCTCAAAGACCTAAAAACAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
3UTR-3UTR CCA 90 bp AAAGTTAATGCACACTTTAATTTGCAAAGAATAATGGCCTCTAGCTCCATCCATCAGGAGACTAAATATTaGTGGACAGTAATACAGTCT +
Preference number: 2 (lower is better)
Translates to: KVNAHFNLQRIMASSSIHQETKY*WTVIQS
Trigger: AGACTGTATTACTGTCCACCAATATTTAGTCTCCTG...ATGGATGGAGCTAGAGGCCATTATTCTTTGCAAATTAAAGTGTGCATTAACTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
3UTR GCA 72 bp TGGTGTAAGCTGTCCTCTCTCTCTCTCCTTCTTGGCTaGCAAACAGGGAAGGGCCCCCTGTCCAGTGGACAC +
Preference number: 3 (lower is better)
Translates to: WCKLSSLSLLLG*QTGKGPLSSGH
Trigger: GTGTCCACTGGACAGGGGGCCCTTCCCTGTTTGGCAGCCAAGAAGGAGAGAGAGAGAGGACAGCTTACACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
3UTR CCA 72 bp TCTTGGCTGCCAAACAGGGAAGGGCCCCCTGTCCAGTaGACACGTGACTTATGTGACCTTATCAACCATTGG +
Preference number: 3 (lower is better)
Translates to: SWLPNREGPPVQ*TRDLCDLINHW
Trigger: CCAATGGTTGATAAGGTCACATAAGTCACGTGTCCACTGGACAGGGGGCCCTTCCCTGTTTGGCAGCCAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
3UTR CCA 72 bp GCTCCTGTTTCACTTTCACGTTCCACCCTGTACACCTaGCTCTGCCTTCCAGATAGCAGTAGCAGAATAAGT +
Preference number: 3 (lower is better)
Translates to: APVSLSRSTLYT*LCLPDSSSRIS
Trigger: ACTTATTCTGCTACTGCTATCTGGAAGGCAGAGCCAGGTGTACAGGGTGGAACGTGAAAGTGAAACAGGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
3UTR-3UTR CAA 90 bp ATGATCTCTCATCTCTGCACACAAGGGGAAAAACTCACAGACCCTGTAGGGCTGATATGGTATAGCCTGTaGCTCCTAGGCTACAAACCC +
Preference number: 3 (lower is better)
Translates to: MISHLCTQGEKLTDPVGLIWYSL*LLGYKP
Trigger: GGGTTTGTAGCCTAGGAGCAACAGGCTATACCATAT...CAGCCCTACAGGGTCTGTGAGTTTTTCCCCTTGTGTGCAGAGATGAGAGATCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
3UTR-3UTR CAA 90 bp TCAACCATTGGAGATGACTCACACTCTTTACCCTGCCCCTTTTGCCTTGTATCCATATGGTATAGCCTGTaGCTCCTAGGCTACAAACCC +
Preference number: 3 (lower is better)
Translates to: STIGDDSHSLPCPFCLVSIWYSL*LLGYKP
Trigger: GGGTTTGTAGCCTAGGAGCAACAGGCTATACCATAT...GGATACAAGGCAAAAGGGGCAGGGTAAAGAGTGTGAGTCATCTCCAATGGTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
3UTR-3UTR CAA 90 bp ATGATCTCTCATCTCTGCACACAAGGGGAAAAACTCACAGACCCTGTAGGGCTGTGTTCACTAAAGGAATaGGCCATGTCTATCAGGAAG +
Preference number: 3 (lower is better)
Translates to: MISHLCTQGEKLTDPVGLCSLKE*AMSIRK
Trigger: CTTCCTGATAGACATGGCCAATTCCTTTAGTGAACA...CAGCCCTACAGGGTCTGTGAGTTTTTCCCCTTGTGTGCAGAGATGAGAGATCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
3UTR-3UTR CAA 90 bp ATGATCTCTCATCTCTGCACACAAGGGGAAAAACTCACAGACCCTGTAGGGCTGTACACTTCTTACTCATaGTGGGTGGACTTTGGCTTT +
Preference number: 3 (lower is better)
Translates to: MISHLCTQGEKLTDPVGLYTSYS*WVDFGF
Trigger: AAAGCCAAAGTCCACCCACAATGAGTAAGAAGTGTA...CAGCCCTACAGGGTCTGTGAGTTTTTCCCCTTGTGTGCAGAGATGAGAGATCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
3UTR GCA 72 bp GTTTCACTTTCACGTTCCACCCTGTACACCTGGCTCTaGCTTCCAGATAGCAGTAGCAGAATAAGTGAAAGT +
Preference number: 3 (lower is better)
Translates to: VSLSRSTLYTWL*LPDSSSRISES
Trigger: ACTTTCACTTATTCTGCTACTGCTATCTGGAAGGCAGAGCCAGGTGTACAGGGTGGAACGTGAAAGTGAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
3UTR CCA 72 bp TTCCTCACTCATACCTGGATAAAGAAGTCACCTGTTTaGGTGACTCAGCTGTTTGGGCCAATCTCAGCCAAT +
Preference number: 3 (lower is better)
Translates to: FLTHTWIKKSPV*VTQLFGPISAN
Trigger: ATTGGCTGAGATTGGCCCAAACAGCTGAGTCACCCAAACAGGTGACTTCTTTATCCAGGTATGAGTGAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
3UTR-3UTR CAA 90 bp TCAACCATTGGAGATGACTCACACTCTTTACCCTGCCCCTTTTGCCTTGTATCCTTGGGGTCACAAAATTaGAGGTACATTTCCTCACTC +
Preference number: 3 (lower is better)
Translates to: STIGDDSHSLPCPFCLVSLGSQN*RYISSL
Trigger: GAGTGAGGAAATGTACCTCAAATTTTGTGACCCCAA...GGATACAAGGCAAAAGGGGCAGGGTAAAGAGTGTGAGTCATCTCCAATGGTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
3UTR-3UTR CAA 90 bp AGGAATCACCTACTGCTTTCCATAATGGGTGAAATAATTTACACTCCTACCAGCAAGGGTGGAGGGTACTaGTCAGAAAAGACATGGGGG +
Preference number: 3 (lower is better)
Translates to: RNHLLLSIMGEIIYTPTSKGGGY*SEKTWG
Trigger: CCCCCATGTCTTTTCTGACAAGTACCCTCCACCCTT...GCTGGTAGGAGTGTAAATTATTTCACCCATTATGGAAAGCAGTAGGTGATTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
3UTR-3UTR CAA 90 bp AGAAGAAATAATGGTGTAAGCTGTCCTCTCTCTCTCTCCTTCTTGGCTGCCAAAGTCTCCTGCTCCTCTTaGTGTCCATGTGTTCTCATT +
Preference number: 3 (lower is better)
Translates to: RRNNGVSCPLSLSFLAAKVSCSS*CPCVLI
Trigger: AATGAGAACACATGGACACAAAGAGGAGCAGGAGAC...TTTGGCAGCCAAGAAGGAGAGAGAGAGAGGACAGCTTACACCATTATTTCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
3UTR TCA 72 bp ACACGTGACTTATGTGACCTTATCAACCATTGGAGATaGCTCACACTCTTTACCCTGCCCCTTTTGCCTTGT +
Preference number: 3 (lower is better)
Translates to: TRDLCDLINHWR*LTLFTLPLLPC
Trigger: ACAAGGCAAAAGGGGCAGGGTAAAGAGTGTGAGTCATCTCCAATGGTTGATAAGGTCACATAAGTCACGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
3UTR-3UTR CAA 90 bp CAGTCAAATGGTATTTCTGTTTTTAGGTCTTTGAGGAATCACCTACTGCTTTCCAAGGGTGGAGGGTACTaGTCAGAAAAGACATGGGGG +
Preference number: 3 (lower is better)
Translates to: QSNGISVFRSLRNHLLLSKGGGY*SEKTWG
Trigger: CCCCCATGTCTTTTCTGACAAGTACCCTCCACCCTT...GGAAAGCAGTAGGTGATTCCTCAAAGACCTAAAAACAGAAATACCATTTGACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
3UTR-3UTR CAA 90 bp AGAAATAATGGTGTAAGCTGTCCTCTCTCTCTCTCCTTCTTGGCTGCCAAACAGTGTTCACTAAAGGAATaGGCCATGTCTATCAGGAAG +
Preference number: 3 (lower is better)
Translates to: RNNGVSCPLSLSFLAAKQCSLKE*AMSIRK
Trigger: CTTCCTGATAGACATGGCCAATTCCTTTAGTGAACA...CTGTTTGGCAGCCAAGAAGGAGAGAGAGAGAGGACAGCTTACACCATTATTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
3UTR-3UTR CAA 90 bp ATGATCTCTCATCTCTGCACACAAGGGGAAAAACTCACAGACCCTGTAGGGCTGTATTCCCCTTTTAGTTaGCAAAGAATAATGGCCTCT +
Preference number: 3 (lower is better)
Translates to: MISHLCTQGEKLTDPVGLYSPFS*QRIMAS
Trigger: AGAGGCCATTATTCTTTGCAAACTAAAAGGGGAATA...CAGCCCTACAGGGTCTGTGAGTTTTTCCCCTTGTGTGCAGAGATGAGAGATCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
3UTR-3UTR CAA 90 bp AGAAGAAATAATGGTGTAAGCTGTCCTCTCTCTCTCTCCTTCTTGGCTGCCAAATTGGGGTCACAAAATTaGAGGTACATTTCCTCACTC +
Preference number: 3 (lower is better)
Translates to: RRNNGVSCPLSLSFLAAKLGSQN*RYISSL
Trigger: GAGTGAGGAAATGTACCTCAAATTTTGTGACCCCAA...TTTGGCAGCCAAGAAGGAGAGAGAGAGAGGACAGCTTACACCATTATTTCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
3UTR-3UTR CAA 90 bp AGAAATAATGGTGTAAGCTGTCCTCTCTCTCTCTCCTTCTTGGCTGCCAAACAGTCTGTTTTTAGGTCTTaGAGGAATCACCTACTGCTT +
Preference number: 3 (lower is better)
Translates to: RNNGVSCPLSLSFLAAKQSVFRS*RNHLLL
Trigger: AAGCAGTAGGTGATTCCTCAAAGACCTAAAAACAGA...CTGTTTGGCAGCCAAGAAGGAGAGAGAGAGAGGACAGCTTACACCATTATTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
3UTR CCA 72 bp GTCACAAAATTTGAGGTACATTTCCTCACTCATACCTaGATAAAGAAGTCACCTGTTTGGGTGACTCAGCTG +
Preference number: 3 (lower is better)
Translates to: VTKFEVHFLTHT*IKKSPVWVTQL
Trigger: CAGCTGAGTCACCCAAACAGGTGACTTCTTTATCCAGGTATGAGTGAGGAAATGTACCTCAAATTTTGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
3UTR CCA 72 bp GTTGAAATGCAAGATAGAACTCACAACTCCAGCAATTaGTGCTCCTTGGGTAAGGCTGTGAAACAAACAACT +
Preference number: 3 (lower is better)
Translates to: VEMQDRTHNSSN*CSLGKAVKQTT
Trigger: AGTTGTTTGTTTCACAGCCTTACCCAAGGAGCACCAATTGCTGGAGTTGTGAGTTCTATCTTGCATTTCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
3UTR-3UTR CAA 90 bp AGAAGAAATAATGGTGTAAGCTGTCCTCTCTCTCTCTCCTTCTTGGCTGCCAAACTTTCCATTCGATCTTaGCACCAATATCATAGTGTC +
Preference number: 3 (lower is better)
Translates to: RRNNGVSCPLSLSFLAAKLSIRS*HQYHSV
Trigger: GACACTATGATATTGGTGCAAAGATCGAATGGAAAG...TTTGGCAGCCAAGAAGGAGAGAGAGAGAGGACAGCTTACACCATTATTTCTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
3UTR GCA 72 bp TATAGTATTCCATGGTGCATATGTATCACACACCTCTaGAATAACACGTGTCTATATGGACCAGGCAACTTC +
Preference number: 3 (lower is better)
Translates to: YSIPWCICITHL*NNTCLYGPGNF
Trigger: GAAGTTGCCTGGTCCATATAGACACGTGTTATTGCAGAGGTGTGTGATACATATGCACCATGGAATACTATA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
3UTR CCA 72 bp CAAACACAATTTCTCATTTACACTTCTTACTCATTGTaGGTGGACTTTGGCTTTGTCACAGCCTCTAACTGG +
Preference number: 3 (lower is better)
Translates to: QTQFLIYTSYSL*VDFGFVTASNW
Trigger: CCAGTTAGAGGCTGTGACAAAGCCAAAGTCCACCCACAATGAGTAAGAAGTGTAAATGAGAAATTGTGTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
3UTR-3UTR CAA 90 bp TATGTATCACACACCTCTGCAATAACACGTGTCTATATGGACCAGGCAACTTCTTCTGTTTTTAGGTCTTaGAGGAATCACCTACTGCTT +
Preference number: 3 (lower is better)
Translates to: YVSHTSAITRVYMDQATSSVFRS*RNHLLL
Trigger: AAGCAGTAGGTGATTCCTCAAAGACCTAAAAACAGA...AGAAGTTGCCTGGTCCATATAGACACGTGTTATTGCAGAGGTGTGTGATACATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
3UTR-3UTR CAA 90 bp TCCTTGTTCATGTTATATGAACACTGTGGGTCAGTTATGACTATGCTACAGGCATACACTTCTTACTCATaGTGGGTGGACTTTGGCTTT +
Preference number: 3 (lower is better)
Translates to: SLFMLYEHCGSVMTMLQAYTSYS*WVDFGF
Trigger: AAAGCCAAAGTCCACCCACAATGAGTAAGAAGTGTA...TGCCTGTAGCATAGTCATAACTGACCCACAGTGTTCATATAACATGAACAAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
3UTR-3UTR CAA 90 bp TATGTATCACACACCTCTGCAATAACACGTGTCTATATGGACCAGGCAACTTCTGATTACAATACCACTTaGAGAGGTTTGTCTTCCTTA +
Preference number: 3 (lower is better)
Translates to: YVSHTSAITRVYMDQATSDYNTT*RGLSSL
Trigger: TAAGGAAGACAAACCTCTCAAAGTGGTATTGTAATC...AGAAGTTGCCTGGTCCATATAGACACGTGTTATTGCAGAGGTGTGTGATACATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
3UTR-3UTR CAA 90 bp TCCTTGTTCATGTTATATGAACACTGTGGGTCAGTTATGACTATGCTACAGGCAGCTACTCAAATTTCATaGGCCAAATCAAGTCATACA +
Preference number: 3 (lower is better)
Translates to: SLFMLYEHCGSVMTMLQAATQIS*AKSSHT
Trigger: TGTATGACTTGATTTGGCCAATGAAATTTGAGTAGC...TGCCTGTAGCATAGTCATAACTGACCCACAGTGTTCATATAACATGAACAAGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
3UTR CCA 72 bp CTACCCATGATAGAAGGACAGGAGACTAAATATTGGTaGACAGTAATACAGTCTATCACAACTACAATCATG +
Preference number: 3 (lower is better)
Translates to: LPMIEGQETKYW*TVIQSITTTIM
Trigger: CATGATTGTAGTTGTGATAGACTGTATTACTGTCCACCAATATTTAGTCTCCTGTCCTTCTATCATGGGTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
3UTR-3UTR CAA 90 bp ACCTGTGAACATCATAGAGTGTATTTACACAAACCTAGATGGTATCGCTTGCTAGATTACAATACCACTTaGAGAGGTTTGTCTTCCTTA +
Preference number: 3 (lower is better)
Translates to: TCEHHRVYLHKPRWYRLLDYNTT*RGLSSL
Trigger: TAAGGAAGACAAACCTCTCAAAGTGGTATTGTAATC...TAGCAAGCGATACCATCTAGGTTTGTGTAAATACACTCTATGATGTTCACAGGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
3UTR-3UTR CAA 90 bp CAGTCAAATGGTATTTCTGTTTTTAGGTCTTTGAGGAATCACCTACTGCTTTCCAAAGGAATAATGGTTTaGGGGTCACAAAATTTGAGG +
Preference number: 3 (lower is better)
Translates to: QSNGISVFRSLRNHLLLSKGIMV*GSQNLR
Trigger: CCTCAAATTTTGTGACCCCAAAACCATTATTCCTTT...GGAAAGCAGTAGGTGATTCCTCAAAGACCTAAAAACAGAAATACCATTTGACTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
3UTR-3UTR CAA 90 bp AACACAATTTCTCATTTACACTTCTTACTCATTGTGGGTGGACTTTGGCTTTGTCTTTCCATTCGATCTTaGCACCAATATCATAGTGTC +
Preference number: 3 (lower is better)
Translates to: NTISHLHFLLIVGGLWLCLSIRS*HQYHSV
Trigger: GACACTATGATATTGGTGCAAAGATCGAATGGAAAG...ACAAAGCCAAAGTCCACCCACAATGAGTAAGAAGTGTAAATGAGAAATTGTGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
3UTR-3UTR CAA 90 bp AACACAATTTCTCATTTACACTTCTTACTCATTGTGGGTGGACTTTGGCTTTGTTATTCCCCTTTTAGTTaGCAAAGAATAATGGCCTCT +
Preference number: 3 (lower is better)
Translates to: NTISHLHFLLIVGGLWLCYSPFS*QRIMAS
Trigger: AGAGGCCATTATTCTTTGCAAACTAAAAGGGGAATA...ACAAAGCCAAAGTCCACCCACAATGAGTAAGAAGTGTAAATGAGAAATTGTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
3UTR-3UTR CAA 90 bp AAAGTTAATGCACACTTTAATTTGCAAAGAATAATGGCCTCTAGCTCCATCCATGCTACTCAAATTTCATaGGCCAAATCAAGTCATACA +
Preference number: 3 (lower is better)
Translates to: KVNAHFNLQRIMASSSIHATQIS*AKSSHT
Trigger: TGTATGACTTGATTTGGCCAATGAAATTTGAGTAGC...ATGGATGGAGCTAGAGGCCATTATTCTTTGCAAATTAAAGTGTGCATTAACTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
3UTR-3UTR CAA 90 bp AAAGTTAATGCACACTTTAATTTGCAAAGAATAATGGCCTCTAGCTCCATCCATTTGTGTCACGGGAGTTaGTTGTACAAGTTCTTTAAT +
Preference number: 3 (lower is better)
Translates to: KVNAHFNLQRIMASSSIHLCHGS*LYKFFN
Trigger: ATTAAAGAACTTGTACAACAAACTCCCGTGACACAA...ATGGATGGAGCTAGAGGCCATTATTCTTTGCAAATTAAAGTGTGCATTAACTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
3UTR TCA 72 bp CGGTACTATAATGTTATGCAATCACCATCATATAGGTaGTCCATTACTGACCAAAACTTCATTATGCAGTGT +
Preference number: 3 (lower is better)
Translates to: RYYNVMQSPSYR*SITDQNFIMQC
Trigger: ACACTGCATAATGAAGTTTTGGTCAGTAATGGATCACCTATATGATGGTGATTGCATAACATTATAGTACCG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
3UTR CCA 72 bp TTCTCGAAGTACATTTCAGGGCTACTCAAATTTCATTaGCCAAATCAAGTCATACAGCAAAGTTTAAAATTC +
Preference number: 3 (lower is better)
Translates to: FSKYISGLLKFH*PNQVIQQSLKF
Trigger: GAATTTTAAACTTTGCTGTATGACTTGATTTGGCCAATGAAATTTGAGTAGCCCTGAAATGTACTTCGAGAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR GCA 90 bp GTCCTCTCTCTCTCTCCTTCTTGGCTGCCAAACAGGGAAGGGCCCCCTGTCCAGGGCCCCAGTGTCTCCTaGTCCTCTTTGTGTCCATGT +
Preference number: 4 (lower is better)
Translates to: VLSLSPSWLPNREGPPVQGPSVS*SSLCPC
Trigger: ACATGGACACAAAGAGGAGCAGGAGACACTGGGGCC...CTGGACAGGGGGCCCTTCCCTGTTTGGCAGCCAAGAAGGAGAGAGAGAGAGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR GCA 90 bp GTCCTCTCTCTCTCTCCTTCTTGGCTGCCAAACAGGGAAGGGCCCCCTGTCCAGTTAGAGTTCAACCTGTaGTATCCCACCTGCAAAGAT +
Preference number: 4 (lower is better)
Translates to: VLSLSPSWLPNREGPPVQLEFNL*YPTCKD
Trigger: ATCTTTGCAGGTGGGATAGCACAGGTTGAACTCTAA...CTGGACAGGGGGCCCTTCCCTGTTTGGCAGCCAAGAAGGAGAGAGAGAGAGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641528.1
CDS-3UTR GCA 90 bp GTCCTCTCTCTCTCTCCTTCTTGGCTGCCAAACAGGGAAGGGCCCCCTGTCCAGATGATCTCTCATCTCTaGACACAAGGGGAAAAACTC +
Preference number: 4 (lower is better)
Translates to: VLSLSPSWLPNREGPPVQMISHL*TQGEKL
Trigger: GAGTTTTTCCCCTTGTGTGCAGAGATGAGAGATCAT...CTGGACAGGGGGCCCTTCCCTGTTTGGCAGCCAAGAAGGAGAGAGAGAGAGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR TCA 90 bp ATGATCTCTCATCTCTGCACACAAGGGGAAAAACTCACAGACCCTGTAGGGCTGCCACAGTCCTCAGTCTaGCTTACAATCCTGGGCCCT +
Preference number: 4 (lower is better)
Translates to: MISHLCTQGEKLTDPVGLPQSSV*LTILGP
Trigger: AGGGCCCAGGATTGTAAGTCAGACTGAGGACTGTGG...CAGCCCTACAGGGTCTGTGAGTTTTTCCCCTTGTGTGCAGAGATGAGAGATCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR TCA 90 bp TCAACCATTGGAGATGACTCACACTCTTTACCCTGCCCCTTTTGCCTTGTATCCAGTCACCTGTTTGGGTaGCTCAGCTGTTTGGGCCAA +
Preference number: 4 (lower is better)
Translates to: STIGDDSHSLPCPFCLVSSHLFG*LSCLGQ
Trigger: TTGGCCCAAACAGCTGAGTCACCCAAACAGGTGACT...GGATACAAGGCAAAAGGGGCAGGGTAAAGAGTGTGAGTCATCTCCAATGGTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR GCA 90 bp ATGATCTCTCATCTCTGCACACAAGGGGAAAAACTCACAGACCCTGTAGGGCTGATGGAGATCCAGGCATaGAGGTGTTCCAAACCAGGA +
Preference number: 4 (lower is better)
Translates to: MISHLCTQGEKLTDPVGLMEIQA*RCSKPG
Trigger: TCCTGGTTTGGAACACCTGCATGCCTGGATCTCCAT...CAGCCCTACAGGGTCTGTGAGTTTTTCCCCTTGTGTGCAGAGATGAGAGATCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR GCA 90 bp ATGATCTCTCATCTCTGCACACAAGGGGAAAAACTCACAGACCCTGTAGGGCTGGGCAAGCTGGAGAACTaGCTGAAGGATGAAGACATA +
Preference number: 4 (lower is better)
Translates to: MISHLCTQGEKLTDPVGLGKLEN*LKDEDI
Trigger: TATGTCTTCATCCTTCAGGCAGTTCTCCAGCTTGCC...CAGCCCTACAGGGTCTGTGAGTTTTTCCCCTTGTGTGCAGAGATGAGAGATCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR CCA 90 bp TCAACCATTGGAGATGACTCACACTCTTTACCCTGCCCCTTTTGCCTTGTATCCGGTGGGGAGAGCATCTaGAGTTTGTGTACCAAACAG +
Preference number: 4 (lower is better)
Translates to: STIGDDSHSLPCPFCLVSGGESI*SLCTKQ
Trigger: CTGTTTGGTACACAAACTCCAGATGCTCTCCCCACC...GGATACAAGGCAAAAGGGGCAGGGTAAAGAGTGTGAGTCATCTCCAATGGTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR CCA 90 bp AGAAATAATGGTGTAAGCTGTCCTCTCTCTCTCTCCTTCTTGGCTGCCAAACAGCAGAAGCCCTTTAACTaGGATGGGGCATTTGCCAGG +
Preference number: 4 (lower is better)
Translates to: RNNGVSCPLSLSFLAAKQQKPFN*DGAFAR
Trigger: CCTGGCAAATGCCCCATCCCAGTTAAAGGGCTTCTG...CTGTTTGGCAGCCAAGAAGGAGAGAGAGAGAGGACAGCTTACACCATTATTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR TCA 90 bp AGAAGAAATAATGGTGTAAGCTGTCCTCTCTCTCTCTCCTTCTTGGCTGCCAAAGCTATGGGAAGAAATTaGCAGTGCCCCCACCTTCCA +
Preference number: 4 (lower is better)
Translates to: RRNNGVSCPLSLSFLAAKAMGRN*QCPHLP
Trigger: TGGAAGGTGGGGGCACTGTCAATTTCTTCCCATAGC...TTTGGCAGCCAAGAAGGAGAGAGAGAGAGGACAGCTTACACCATTATTTCTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR TCA 90 bp ATGATCTCTCATCTCTGCACACAAGGGGAAAAACTCACAGACCCTGTAGGGCTGTTCTTGGTGATGTCATaGATACCTTTCCCTGCCATC +
Preference number: 4 (lower is better)
Translates to: MISHLCTQGEKLTDPVGLFLVMS*IPFPAI
Trigger: GATGGCAGGGAAAGGTATTCATGACATCACCAAGAA...CAGCCCTACAGGGTCTGTGAGTTTTTCCCCTTGTGTGCAGAGATGAGAGATCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641528.1
CDS-3UTR TCA 90 bp ATGATCTCTCATCTCTGCACACAAGGGGAAAAACTCACAGACCCTGTAGGGCTGGGTAGAGGGAAAGAATaGAAGATAAGCTTTCCAGCC +
Preference number: 4 (lower is better)
Translates to: MISHLCTQGEKLTDPVGLGRGKE*KISFPA
Trigger: GGCTGGAAAGCTTATCTTTCATTCTTTCCCTCTACC...CAGCCCTACAGGGTCTGTGAGTTTTTCCCCTTGTGTGCAGAGATGAGAGATCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR GCA 90 bp TGGGAAGGTCAAACCTCTACTATCAGACCAGACTATAGGTGCACTCCTGGTTTGTTTTCATTAGCTTCATaGAGCACCAGTGCCGCCTTC +
Preference number: 4 (lower is better)
Translates to: WEGQTSTIRPDYRCTPGLFSLAS*STSAAF
Trigger: GAAGGCGGCACTGGTGCTGCATGAAGCTAATGAAAA...CAAACCAGGAGTGCACCTATAGTCTGGTCTGATAGTAGAGGTTTGACCTTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR CCA 90 bp TCAACCATTGGAGATGACTCACACTCTTTACCCTGCCCCTTTTGCCTTGTATCCGTCACAGCCTCTAACTaGAACTTTGCTGGGTTTTGC +
Preference number: 4 (lower is better)
Translates to: STIGDDSHSLPCPFCLVSVTASN*NFAGFC
Trigger: GCAAAACCCAGCAAAGTTCCAGTTAGAGGCTGTGAC...GGATACAAGGCAAAAGGGGCAGGGTAAAGAGTGTGAGTCATCTCCAATGGTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR TCA 90 bp ATGATCTCTCATCTCTGCACACAAGGGGAAAAACTCACAGACCCTGTAGGGCTGGATAGTTATTTTTCCTaGTCCTCTCCCTCCTACCTT +
Preference number: 4 (lower is better)
Translates to: MISHLCTQGEKLTDPVGLDSYFS*SSPSYL
Trigger: AAGGTAGGAGGGAGAGGATCAGGAAAAATAACTATC...CAGCCCTACAGGGTCTGTGAGTTTTTCCCCTTGTGTGCAGAGATGAGAGATCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR GCA 90 bp ATGATCTCTCATCTCTGCACACAAGGGGAAAAACTCACAGACCCTGTAGGGCTGTCTATTTCCCTAAGTTaGAGCTGTATCCACAGTCCT +
Preference number: 4 (lower is better)
Translates to: MISHLCTQGEKLTDPVGLSISLS*SCIHSP
Trigger: AGGACTGTGGATACAGCTGCAACTTAGGGAAATAGA...CAGCCCTACAGGGTCTGTGAGTTTTTCCCCTTGTGTGCAGAGATGAGAGATCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR CCA 90 bp TCAACCATTGGAGATGACTCACACTCTTTACCCTGCCCCTTTTGCCTTGTATCCTACCAAACAGTTGGGTaGGACTATCGAGACTTCTGT +
Preference number: 4 (lower is better)
Translates to: STIGDDSHSLPCPFCLVSYQTVG*DYRDFC
Trigger: ACAGAAGTCTCGATAGTCCCACCCAACTGTTTGGTA...GGATACAAGGCAAAAGGGGCAGGGTAAAGAGTGTGAGTCATCTCCAATGGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR CCA 90 bp TGGGAAGGTCAAACCTCTACTATCAGACCAGACTATAGGTGCACTCCTGGTTTGAAGAGTGGCAAAGGGTaGAGGGTACTTGTCAGAAAA +
Preference number: 4 (lower is better)
Translates to: WEGQTSTIRPDYRCTPGLKSGKG*RVLVRK
Trigger: TTTTCTGACAAGTACCCTCCACCCTTTGCCACTCTT...CAAACCAGGAGTGCACCTATAGTCTGGTCTGATAGTAGAGGTTTGACCTTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR CCA 90 bp TATGTATCACACACCTCTGCAATAACACGTGTCTATATGGACCAGGCAACTTCTTCTCTCTCTCCTTCTTaGCTGCCAAACAGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: YVSHTSAITRVYMDQATSSLSPS*LPNREG
Trigger: CCCTTCCCTGTTTGGCAGCCAAGAAGGAGAGAGAGA...AGAAGTTGCCTGGTCCATATAGACACGTGTTATTGCAGAGGTGTGTGATACATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
3UTR CAA 72 bp TTTCCTCACTCATACCTGGATAAAGAAGTCACCTGTTaGGGTGACTCAGCTGTTTGGGCCAATCTCAGCCAA +
Preference number: 4 (lower is better)
Translates to: FPHSYLDKEVTC*GDSAVWANLSQ
Trigger: TTGGCTGAGATTGGCCCAAACAGCTGAGTCACCCAAACAGGTGACTTCTTTATCCAGGTATGAGTGAGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
3UTR CAA 72 bp GAGATGACTCACACTCTTTACCCTGCCCCTTTTGCCTaGTATCCAATAAATAACAGTGCAGCCAGGCATTCG +
Preference number: 4 (lower is better)
Translates to: EMTHTLYPAPFA*YPINNSAARHS
Trigger: CGAATGCCTGGCTGCACTGTTATTTATTGGATACAAGGCAAAAGGGGCAGGGTAAAGAGTGTGAGTCATCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR TCA 90 bp ACCTGTGAACATCATAGAGTGTATTTACACAAACCTAGATGGTATCGCTTGCTACCACAGTCCTCAGTCTaGCTTACAATCCTGGGCCCT +
Preference number: 4 (lower is better)
Translates to: TCEHHRVYLHKPRWYRLLPQSSV*LTILGP
Trigger: AGGGCCCAGGATTGTAAGTCAGACTGAGGACTGTGG...TAGCAAGCGATACCATCTAGGTTTGTGTAAATACACTCTATGATGTTCACAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR TCA 90 bp ATGATCTCTCATCTCTGCACACAAGGGGAAAAACTCACAGACCCTGTAGGGCTGTTTCTGTGTTCTTGGTaGTGTCATGAATACCTTTCC +
Preference number: 4 (lower is better)
Translates to: MISHLCTQGEKLTDPVGLFLCSW*CHEYLS
Trigger: GGAAAGGTATTCATGACATCACCAAGAACACAGAAA...CAGCCCTACAGGGTCTGTGAGTTTTTCCCCTTGTGTGCAGAGATGAGAGATCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641528.1
CDS-3UTR GCA 90 bp TCAACCATTGGAGATGACTCACACTCTTTACCCTGCCCCTTTTGCCTTGTATCCATGATCTCTCATCTCTaGACACAAGGGGAAAAACTC +
Preference number: 4 (lower is better)
Translates to: STIGDDSHSLPCPFCLVSMISHL*TQGEKL
Trigger: GAGTTTTTCCCCTTGTGTGCAGAGATGAGAGATCAT...GGATACAAGGCAAAAGGGGCAGGGTAAAGAGTGTGAGTCATCTCCAATGGTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR CCA 90 bp TATGTATCACACACCTCTGCAATAACACGTGTCTATATGGACCAGGCAACTTCTCTACTGGAGTGTAGGTaGACAGGATGGCACCTATGT +
Preference number: 4 (lower is better)
Translates to: YVSHTSAITRVYMDQATSLLECR*TGWHLC
Trigger: ACATAGGTGCCATCCTGTCCACCTACACTCCAGTAG...AGAAGTTGCCTGGTCCATATAGACACGTGTTATTGCAGAGGTGTGTGATACATA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR CCA 90 bp ACCTGTGAACATCATAGAGTGTATTTACACAAACCTAGATGGTATCGCTTGCTATCCACCCTGTACACCTaGCTCTGCCTTCCAGATAGC +
Preference number: 4 (lower is better)
Translates to: TCEHHRVYLHKPRWYRLLSTLYT*LCLPDS
Trigger: GCTATCTGGAAGGCAGAGCCAGGTGTACAGGGTGGA...TAGCAAGCGATACCATCTAGGTTTGTGTAAATACACTCTATGATGTTCACAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR CCA 90 bp CAGTCAAATGGTATTTCTGTTTTTAGGTCTTTGAGGAATCACCTACTGCTTTCCTCCACCCTGTACACCTaGCTCTGCCTTCCAGATAGC +
Preference number: 4 (lower is better)
Translates to: QSNGISVFRSLRNHLLLSSTLYT*LCLPDS
Trigger: GCTATCTGGAAGGCAGAGCCAGGTGTACAGGGTGGA...GGAAAGCAGTAGGTGATTCCTCAAAGACCTAAAAACAGAAATACCATTTGACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR TCA 90 bp ACCTGTGAACATCATAGAGTGTATTTACACAAACCTAGATGGTATCGCTTGCTAGCTATGGGAAGAAATTaGCAGTGCCCCCACCTTCCA +
Preference number: 4 (lower is better)
Translates to: TCEHHRVYLHKPRWYRLLAMGRN*QCPHLP
Trigger: TGGAAGGTGGGGGCACTGTCAATTTCTTCCCATAGC...TAGCAAGCGATACCATCTAGGTTTGTGTAAATACACTCTATGATGTTCACAGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR TCA 90 bp AGAAATAATGGTGTAAGCTGTCCTCTCTCTCTCTCCTTCTTGGCTGCCAAACAGTTCTCTGGAATAGACTaGGCACATACTCACGAATCT +
Preference number: 4 (lower is better)
Translates to: RNNGVSCPLSLSFLAAKQFSGID*AHTHES
Trigger: AGATTCGTGAGTATGTGCTCAGTCTATTCCAGAGAA...CTGTTTGGCAGCCAAGAAGGAGAGAGAGAGAGGACAGCTTACACCATTATTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR TCA 90 bp CAGTCAAATGGTATTTCTGTTTTTAGGTCTTTGAGGAATCACCTACTGCTTTCCAGTCACCTGTTTGGGTaGCTCAGCTGTTTGGGCCAA +
Preference number: 4 (lower is better)
Translates to: QSNGISVFRSLRNHLLLSSHLFG*LSCLGQ
Trigger: TTGGCCCAAACAGCTGAGTCACCCAAACAGGTGACT...GGAAAGCAGTAGGTGATTCCTCAAAGACCTAAAAACAGAAATACCATTTGACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR TCA 90 bp TGGGAAGGTCAAACCTCTACTATCAGACCAGACTATAGGTGCACTCCTGGTTTGCTGTTTTTAGGTCTTTaGGGAATCACCTACTGCTTT +
Preference number: 4 (lower is better)
Translates to: WEGQTSTIRPDYRCTPGLLFLGL*GITYCF
Trigger: AAAGCAGTAGGTGATTCCTCAAAGACCTAAAAACAG...CAAACCAGGAGTGCACCTATAGTCTGGTCTGATAGTAGAGGTTTGACCTTCCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR TCA 90 bp AGAAGAAATAATGGTGTAAGCTGTCCTCTCTCTCTCTCCTTCTTGGCTGCCAAACATGAGTCTAGGCTGTaGTACGCTTATTCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: RRNNGVSCPLSLSFLAAKHESRL*YAYSSG
Trigger: ACCAGAAGAATAAGCGTATCACAGCCTAGACTCATG...TTTGGCAGCCAAGAAGGAGAGAGAGAGAGGACAGCTTACACCATTATTTCTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR TCA 90 bp TATGTATCACACACCTCTGCAATAACACGTGTCTATATGGACCAGGCAACTTCTCTATGCTACAGGCAGTaGGTCAGATTCACATCTGCT +
Preference number: 4 (lower is better)
Translates to: YVSHTSAITRVYMDQATSLCYRQ*VRFTSA
Trigger: AGCAGATGTGAATCTGACTCACTGCCTGTAGCATAG...AGAAGTTGCCTGGTCCATATAGACACGTGTTATTGCAGAGGTGTGTGATACATA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR TCA 90 bp ATGATCTCTCATCTCTGCACACAAGGGGAAAAACTCACAGACCCTGTAGGGCTGTTGTCTTTATTTCTATaGTCTCTCATCTCTGCACAC +
Preference number: 4 (lower is better)
Translates to: MISHLCTQGEKLTDPVGLLSLFL*SLISAH
Trigger: GTGTGCAGAGATGAGAGATCATAGAAATAAAGACAA...CAGCCCTACAGGGTCTGTGAGTTTTTCCCCTTGTGTGCAGAGATGAGAGATCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR GCA 90 bp CAGTCAAATGGTATTTCTGTTTTTAGGTCTTTGAGGAATCACCTACTGCTTTCCTTCATGCAGCACCAGTaGCGCCTTCCTCTTTCAGTC +
Preference number: 4 (lower is better)
Translates to: QSNGISVFRSLRNHLLLSFMQHQ*RLPLSV
Trigger: GACTGAAAGAGGAAGGCGGCACTGGTGCTGCATGAA...GGAAAGCAGTAGGTGATTCCTCAAAGACCTAAAAACAGAAATACCATTTGACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR GCA 90 bp AACTTGTGTCACGGGAGTTTGTTGTACAAGTTCTTTAATCACCTAGGTACTAGGATGGAGATCCAGGCATaGAGGTGTTCCAAACCAGGA +
Preference number: 4 (lower is better)
Translates to: NLCHGSLLYKFFNHLGTRMEIQA*RCSKPG
Trigger: TCCTGGTTTGGAACACCTGCATGCCTGGATCTCCAT...CCTAGTACCTAGGTGATTAAAGAACTTGTACAACAAACTCCCGTGACACAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR GCA 90 bp AACACAATTTCTCATTTACACTTCTTACTCATTGTGGGTGGACTTTGGCTTTGTGGCCCCAGTGTCTCCTaGTCCTCTTTGTGTCCATGT +
Preference number: 4 (lower is better)
Translates to: NTISHLHFLLIVGGLWLCGPSVS*SSLCPC
Trigger: ACATGGACACAAAGAGGAGCAGGAGACACTGGGGCC...ACAAAGCCAAAGTCCACCCACAATGAGTAAGAAGTGTAAATGAGAAATTGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR GCA 90 bp AACTTGTGTCACGGGAGTTTGTTGTACAAGTTCTTTAATCACCTAGGTACTAGGAACTCCAGCAATTGGTaGTCCTTGGGTAAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: NLCHGSLLYKFFNHLGTRNSSNW*SLGKAV
Trigger: CACAGCCTTACCCAAGGAGCACCAATTGCTGGAGTT...CCTAGTACCTAGGTGATTAAAGAACTTGTACAACAAACTCCCGTGACACAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR CCA 90 bp AGAAATAATGGTGTAAGCTGTCCTCTCTCTCTCTCCTTCTTGGCTGCCAAACAGTCTGACTTACAATCCTaGGCCCTTTTCATTAGCTTC +
Preference number: 4 (lower is better)
Translates to: RNNGVSCPLSLSFLAAKQSDLQS*ALFISF
Trigger: GAAGCTAATGAAAAGGGCCCAGGATTGTAAGTCAGA...CTGTTTGGCAGCCAAGAAGGAGAGAGAGAGAGGACAGCTTACACCATTATTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR CCA 90 bp CAGTCAAATGGTATTTCTGTTTTTAGGTCTTTGAGGAATCACCTACTGCTTTCCCAGAAGCCCTTTAACTaGGATGGGGCATTTGCCAGG +
Preference number: 4 (lower is better)
Translates to: QSNGISVFRSLRNHLLLSQKPFN*DGAFAR
Trigger: CCTGGCAAATGCCCCATCCCAGTTAAAGGGCTTCTG...GGAAAGCAGTAGGTGATTCCTCAAAGACCTAAAAACAGAAATACCATTTGACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR CCA 90 bp TCCTTGTTCATGTTATATGAACACTGTGGGTCAGTTATGACTATGCTACAGGCATGTAGGTGGACAGGATaGCACCTATGTGAGACACAC +
Preference number: 4 (lower is better)
Translates to: SLFMLYEHCGSVMTMLQACRWTG*HLCETH
Trigger: GTGTGTCTCACATAGGTGCCATCCTGTCCACCTACA...TGCCTGTAGCATAGTCATAACTGACCCACAGTGTTCATATAACATGAACAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR CCA 90 bp AGGAATCACCTACTGCTTTCCATAATGGGTGAAATAATTTACACTCCTACCAGCCTACTGGAGTGTAGGTaGACAGGATGGCACCTATGT +
Preference number: 4 (lower is better)
Translates to: RNHLLLSIMGEIIYTPTSLLECR*TGWHLC
Trigger: ACATAGGTGCCATCCTGTCCACCTACACTCCAGTAG...GCTGGTAGGAGTGTAAATTATTTCACCCATTATGGAAAGCAGTAGGTGATTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR CCA 90 bp TATGTATCACACACCTCTGCAATAACACGTGTCTATATGGACCAGGCAACTTCTGTCACAGCCTCTAACTaGAACTTTGCTGGGTTTTGC +
Preference number: 4 (lower is better)
Translates to: YVSHTSAITRVYMDQATSVTASN*NFAGFC
Trigger: GCAAAACCCAGCAAAGTTCCAGTTAGAGGCTGTGAC...AGAAGTTGCCTGGTCCATATAGACACGTGTTATTGCAGAGGTGTGTGATACATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR CCA 90 bp TCAACCATTGGAGATGACTCACACTCTTTACCCTGCCCCTTTTGCCTTGTATCCTTCACATCTGCTCCATaGATCTTCATCATGAGTCTA +
Preference number: 4 (lower is better)
Translates to: STIGDDSHSLPCPFCLVSFTSAP*IFIMSL
Trigger: TAGACTCATGATGAAGATCCATGGAGCAGATGTGAA...GGATACAAGGCAAAAGGGGCAGGGTAAAGAGTGTGAGTCATCTCCAATGGTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR CCA 90 bp TTTCAGAAATCTCAGCTTCAAGAGGGAAGGGTGTTATTTCTCTTTTCATGGTTCTCTCTCTCTCCTTCTTaGCTGCCAAACAGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: FQKSQLQEGRVLFLFSWFSLSPS*LPNREG
Trigger: CCCTTCCCTGTTTGGCAGCCAAGAAGGAGAGAGAGA...GAACCATGAAAAGAGAAATAACACCCTTCCCTCTTGAAGCTGAGATTTCTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR TCA 90 bp TATGTATCACACACCTCTGCAATAACACGTGTCTATATGGACCAGGCAACTTCTTTCTGTTCCCTCTATTaGAGGACCAGAGTAGAAGCA +
Preference number: 4 (lower is better)
Translates to: YVSHTSAITRVYMDQATSFCSLY*RTRVEA
Trigger: TGCTTCTACTCTGGTCCTTCAATAGAGGGAACAGAA...AGAAGTTGCCTGGTCCATATAGACACGTGTTATTGCAGAGGTGTGTGATACATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR TCA 90 bp TCAACCATTGGAGATGACTCACACTCTTTACCCTGCCCCTTTTGCCTTGTATCCCTTCTACAGTATATATaGTTAGAGTTCAACCTGTGC +
Preference number: 4 (lower is better)
Translates to: STIGDDSHSLPCPFCLVSLLQYI*LEFNLC
Trigger: GCACAGGTTGAACTCTAATCATATATACTGTAGAAG...GGATACAAGGCAAAAGGGGCAGGGTAAAGAGTGTGAGTCATCTCCAATGGTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641528.1
CDS-3UTR TCA 90 bp TCCTTGTTCATGTTATATGAACACTGTGGGTCAGTTATGACTATGCTACAGGCAGATGGGGATACATTCTaGGAAATGTGTCCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: SLFMLYEHCGSVMTMLQADGDTF*EMCPQV
Trigger: CACCTGAGGACACATTTCTCAGAATGTATCCCCATC...TGCCTGTAGCATAGTCATAACTGACCCACAGTGTTCATATAACATGAACAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR TCA 90 bp TGGGAAGGTCAAACCTCTACTATCAGACCAGACTATAGGTGCACTCCTGGTTTGGCTTTCCATAATGGGTaGAATAATTTACACTCCTAC +
Preference number: 4 (lower is better)
Translates to: WEGQTSTIRPDYRCTPGLAFHNG*NNLHSY
Trigger: GTAGGAGTGTAAATTATTTCACCCATTATGGAAAGC...CAAACCAGGAGTGCACCTATAGTCTGGTCTGATAGTAGAGGTTTGACCTTCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR TCA 90 bp TCCTTGTTCATGTTATATGAACACTGTGGGTCAGTTATGACTATGCTACAGGCACTATGCTACAGGCAGTaGGTCAGATTCACATCTGCT +
Preference number: 4 (lower is better)
Translates to: SLFMLYEHCGSVMTMLQALCYRQ*VRFTSA
Trigger: AGCAGATGTGAATCTGACTCACTGCCTGTAGCATAG...TGCCTGTAGCATAGTCATAACTGACCCACAGTGTTCATATAACATGAACAAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR TCA 90 bp TATGTATCACACACCTCTGCAATAACACGTGTCTATATGGACCAGGCAACTTCTCCTTGGGTAAGGCTGTaGAACAAACAACTCCCAAAT +
Preference number: 4 (lower is better)
Translates to: YVSHTSAITRVYMDQATSPWVRL*NKQLPN
Trigger: ATTTGGGAGTTGTTTGTTTCACAGCCTTACCCAAGG...AGAAGTTGCCTGGTCCATATAGACACGTGTTATTGCAGAGGTGTGTGATACATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR GCA 90 bp AACACAATTTCTCATTTACACTTCTTACTCATTGTGGGTGGACTTTGGCTTTGTTTCATGCAGCACCAGTaGCGCCTTCCTCTTTCAGTC +
Preference number: 4 (lower is better)
Translates to: NTISHLHFLLIVGGLWLCFMQHQ*RLPLSV
Trigger: GACTGAAAGAGGAAGGCGGCACTGGTGCTGCATGAA...ACAAAGCCAAAGTCCACCCACAATGAGTAAGAAGTGTAAATGAGAAATTGTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR GCA 90 bp AGGAATCACCTACTGCTTTCCATAATGGGTGAAATAATTTACACTCCTACCAGCGGCAAGCTGGAGAACTaGCTGAAGGATGAAGACATA +
Preference number: 4 (lower is better)
Translates to: RNHLLLSIMGEIIYTPTSGKLEN*LKDEDI
Trigger: TATGTCTTCATCCTTCAGGCAGTTCTCCAGCTTGCC...GCTGGTAGGAGTGTAAATTATTTCACCCATTATGGAAAGCAGTAGGTGATTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR CCA 90 bp CAGTCAAATGGTATTTCTGTTTTTAGGTCTTTGAGGAATCACCTACTGCTTTCCTGTAGGTGGACAGGATaGCACCTATGTGAGACACAC +
Preference number: 4 (lower is better)
Translates to: QSNGISVFRSLRNHLLLSCRWTG*HLCETH
Trigger: GTGTGTCTCACATAGGTGCCATCCTGTCCACCTACA...GGAAAGCAGTAGGTGATTCCTCAAAGACCTAAAAACAGAAATACCATTTGACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR CCA 90 bp TCCTTGTTCATGTTATATGAACACTGTGGGTCAGTTATGACTATGCTACAGGCAAAGAAGTCACCTGTTTaGGTGACTCAGCTGTTTGGG +
Preference number: 4 (lower is better)
Translates to: SLFMLYEHCGSVMTMLQAKKSPV*VTQLFG
Trigger: CCCAAACAGCTGAGTCACCCAAACAGGTGACTTCTT...TGCCTGTAGCATAGTCATAACTGACCCACAGTGTTCATATAACATGAACAAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR CCA 90 bp AGGAATCACCTACTGCTTTCCATAATGGGTGAAATAATTTACACTCCTACCAGCAAGAAGTCACCTGTTTaGGTGACTCAGCTGTTTGGG +
Preference number: 4 (lower is better)
Translates to: RNHLLLSIMGEIIYTPTSKKSPV*VTQLFG
Trigger: CCCAAACAGCTGAGTCACCCAAACAGGTGACTTCTT...GCTGGTAGGAGTGTAAATTATTTCACCCATTATGGAAAGCAGTAGGTGATTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR CCA 90 bp CAGTCAAATGGTATTTCTGTTTTTAGGTCTTTGAGGAATCACCTACTGCTTTCCCACAACTCCAGCAATTaGTGCTCCTTGGGTAAGGCT +
Preference number: 4 (lower is better)
Translates to: QSNGISVFRSLRNHLLLSHNSSN*CSLGKA
Trigger: AGCCTTACCCAAGGAGCACCAATTGCTGGAGTTGTG...GGAAAGCAGTAGGTGATTCCTCAAAGACCTAAAAACAGAAATACCATTTGACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR TCA 90 bp TCTGTTTTTAGGTCTTTGAGGAATCACCTACTGCTTTCCATAATGGGTGAAATAACAGGGTTGGAGAGCTaGTGCCTAAGATCAGGAATG +
Preference number: 4 (lower is better)
Translates to: SVFRSLRNHLLLSIMGEITGLES*CLRSGM
Trigger: CATTCCTGATCTTAGGCATCAGCTCTCCAACCCTGT...TATTTCACCCATTATGGAAAGCAGTAGGTGATTCCTCAAAGACCTAAAAACAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR TCA 90 bp AGGAATCACCTACTGCTTTCCATAATGGGTGAAATAATTTACACTCCTACCAGCTTCTGTTCCCTCTATTaGAGGACCAGAGTAGAAGCA +
Preference number: 4 (lower is better)
Translates to: RNHLLLSIMGEIIYTPTSFCSLY*RTRVEA
Trigger: TGCTTCTACTCTGGTCCTTCAATAGAGGGAACAGAA...GCTGGTAGGAGTGTAAATTATTTCACCCATTATGGAAAGCAGTAGGTGATTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR TCA 90 bp CAGTCAAATGGTATTTCTGTTTTTAGGTCTTTGAGGAATCACCTACTGCTTTCCGATGGGGATACATTCTaGGAAATGTGTCCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: QSNGISVFRSLRNHLLLSDGDTF*EMCPQV
Trigger: CACCTGAGGACACATTTCTCAGAATGTATCCCCATC...GGAAAGCAGTAGGTGATTCCTCAAAGACCTAAAAACAGAAATACCATTTGACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR TCA 90 bp AGGAATCACCTACTGCTTTCCATAATGGGTGAAATAATTTACACTCCTACCAGCCCTTGGGTAAGGCTGTaGAACAAACAACTCCCAAAT +
Preference number: 4 (lower is better)
Translates to: RNHLLLSIMGEIIYTPTSPWVRL*NKQLPN
Trigger: ATTTGGGAGTTGTTTGTTTCACAGCCTTACCCAAGG...GCTGGTAGGAGTGTAAATTATTTCACCCATTATGGAAAGCAGTAGGTGATTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR GCA 90 bp AACACAATTTCTCATTTACACTTCTTACTCATTGTGGGTGGACTTTGGCTTTGTAACTCCAGCAATTGGTaGTCCTTGGGTAAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: NTISHLHFLLIVGGLWLCNSSNW*SLGKAV
Trigger: CACAGCCTTACCCAAGGAGCACCAATTGCTGGAGTT...ACAAAGCCAAAGTCCACCCACAATGAGTAAGAAGTGTAAATGAGAAATTGTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR CCA 90 bp TCAACCATTGGAGATGACTCACACTCTTTACCCTGCCCCTTTTGCCTTGTATCCGTGACAGATCCAAACTaGAATAATCAACTAAGACTT +
Preference number: 4 (lower is better)
Translates to: STIGDDSHSLPCPFCLVSVTDPN*NNQLRL
Trigger: AAGTCTTAGTTGATTATTCCAGTTTGGATCTGTCAC...GGATACAAGGCAAAAGGGGCAGGGTAAAGAGTGTGAGTCATCTCCAATGGTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR CCA 90 bp TCTGTTTTTAGGTCTTTGAGGAATCACCTACTGCTTTCCATAATGGGTGAAATACACAACTCCAGCAATTaGTGCTCCTTGGGTAAGGCT +
Preference number: 4 (lower is better)
Translates to: SVFRSLRNHLLLSIMGEIHNSSN*CSLGKA
Trigger: AGCCTTACCCAAGGAGCACCAATTGCTGGAGTTGTG...TATTTCACCCATTATGGAAAGCAGTAGGTGATTCCTCAAAGACCTAAAAACAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
3UTR CAA 72 bp GCTCAAACACAATTTCTCATTTACACTTCTTACTCATaGTGGGTGGACTTTGGCTTTGTCACAGCCTCTAAC +
Preference number: 4 (lower is better)
Translates to: AQTQFLIYTSYS*WVDFGFVTASN
Trigger: GTTAGAGGCTGTGACAAAGCCAAAGTCCACCCACAATGAGTAAGAAGTGTAAATGAGAAATTGTGTTTGAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR TCA 90 bp AGGAATCACCTACTGCTTTCCATAATGGGTGAAATAATTTACACTCCTACCAGCGATAGTTATTTTTCCTaGTCCTCTCCCTCCTACCTT +
Preference number: 4 (lower is better)
Translates to: RNHLLLSIMGEIIYTPTSDSYFS*SSPSYL
Trigger: AAGGTAGGAGGGAGAGGATCAGGAAAAATAACTATC...GCTGGTAGGAGTGTAAATTATTTCACCCATTATGGAAAGCAGTAGGTGATTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR TCA 90 bp TTTCAGAAATCTCAGCTTCAAGAGGGAAGGGTGTTATTTCTCTTTTCATGGTTCGGTAGAGGGAAAGAATaGAAGATAAGCTTTCCAGCC +
Preference number: 4 (lower is better)
Translates to: FQKSQLQEGRVLFLFSWFGRGKE*KISFPA
Trigger: GGCTGGAAAGCTTATCTTTCATTCTTTCCCTCTACC...GAACCATGAAAAGAGAAATAACACCCTTCCCTCTTGAAGCTGAGATTTCTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR TCA 90 bp CAGTCAAATGGTATTTCTGTTTTTAGGTCTTTGAGGAATCACCTACTGCTTTCCCATGAGTCTAGGCTGTaGTACGCTTATTCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: QSNGISVFRSLRNHLLLSHESRL*YAYSSG
Trigger: ACCAGAAGAATAAGCGTATCACAGCCTAGACTCATG...GGAAAGCAGTAGGTGATTCCTCAAAGACCTAAAAACAGAAATACCATTTGACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR TCA 90 bp AGAAGAAATAATGGTGTAAGCTGTCCTCTCTCTCTCTCCTTCTTGGCTGCCAAATTGTCTTTATTTCTATaGTCTCTCATCTCTGCACAC +
Preference number: 4 (lower is better)
Translates to: RRNNGVSCPLSLSFLAAKLSLFL*SLISAH
Trigger: GTGTGCAGAGATGAGAGATCATAGAAATAAAGACAA...TTTGGCAGCCAAGAAGGAGAGAGAGAGAGGACAGCTTACACCATTATTTCTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR GCA 90 bp AACACAATTTCTCATTTACACTTCTTACTCATTGTGGGTGGACTTTGGCTTTGTTTTTCATTAGCTTCATaGAGCACCAGTGCCGCCTTC +
Preference number: 4 (lower is better)
Translates to: NTISHLHFLLIVGGLWLCFSLAS*STSAAF
Trigger: GAAGGCGGCACTGGTGCTGCATGAAGCTAATGAAAA...ACAAAGCCAAAGTCCACCCACAATGAGTAAGAAGTGTAAATGAGAAATTGTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR GCA 90 bp TCCTTGTTCATGTTATATGAACACTGTGGGTCAGTTATGACTATGCTACAGGCACTGTGCTATCCCACCTaGAAAGATTACCTCTTGTTT +
Preference number: 4 (lower is better)
Translates to: SLFMLYEHCGSVMTMLQALCYPT*KDYLLF
Trigger: AAACAAGAGGTAATCTTTGCAGGTGGGATAGCACAG...TGCCTGTAGCATAGTCATAACTGACCCACAGTGTTCATATAACATGAACAAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641528.1
CDS-3UTR GCA 90 bp TATGTATCACACACCTCTGCAATAACACGTGTCTATATGGACCAGGCAACTTCTACATACTCACGAATCTaGTTGGTCTTGACTCCATAT +
Preference number: 4 (lower is better)
Translates to: YVSHTSAITRVYMDQATSTYSRI*LVLTPY
Trigger: ATATGGAGTCAAGACCAAGCAGATTCGTGAGTATGT...AGAAGTTGCCTGGTCCATATAGACACGTGTTATTGCAGAGGTGTGTGATACATA
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR CCA 90 bp AGAAGAAATAATGGTGTAAGCTGTCCTCTCTCTCTCTCCTTCTTGGCTGCCAAACTGTATAGTATTCCATaGTGCATATGTATCACACAC +
Preference number: 4 (lower is better)
Translates to: RRNNGVSCPLSLSFLAAKLYSIP*CICITH
Trigger: GTGTGTGATACATATGCACCATGGAATACTATACAG...TTTGGCAGCCAAGAAGGAGAGAGAGAGAGGACAGCTTACACCATTATTTCTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR TCA 90 bp ACCTGTGAACATCATAGAGTGTATTTACACAAACCTAGATGGTATCGCTTGCTATTCTCTGGAATAGACTaGGCACATACTCACGAATCT +
Preference number: 4 (lower is better)
Translates to: TCEHHRVYLHKPRWYRLLFSGID*AHTHES
Trigger: AGATTCGTGAGTATGTGCTCAGTCTATTCCAGAGAA...TAGCAAGCGATACCATCTAGGTTTGTGTAAATACACTCTATGATGTTCACAGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR GCA 90 bp AACTTGTGTCACGGGAGTTTGTTGTACAAGTTCTTTAATCACCTAGGTACTAGGTGGAGGCAAAAGACATaGAGTGAAAAGCTAGATACA +
Preference number: 4 (lower is better)
Translates to: NLCHGSLLYKFFNHLGTRWRQKT*SEKLDT
Trigger: TGTATCTAGCTTTTCACTGCATGTCTTTTGCCTCCA...CCTAGTACCTAGGTGATTAAAGAACTTGTACAACAAACTCCCGTGACACAAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR GCA 90 bp AGGAATCACCTACTGCTTTCCATAATGGGTGAAATAATTTACACTCCTACCAGCCTCCATCCATGTTCCTaGAAAGGACATGATCTTATT +
Preference number: 4 (lower is better)
Translates to: RNHLLLSIMGEIIYTPTSLHPCS*KGHDLI
Trigger: AATAAGATCATGTCCTTTGCAGGAACATGGATGGAG...GCTGGTAGGAGTGTAAATTATTTCACCCATTATGGAAAGCAGTAGGTGATTCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR CCA 90 bp AACACAATTTCTCATTTACACTTCTTACTCATTGTGGGTGGACTTTGGCTTTGTAAGAGTGGCAAAGGGTaGAGGGTACTTGTCAGAAAA +
Preference number: 4 (lower is better)
Translates to: NTISHLHFLLIVGGLWLCKSGKG*RVLVRK
Trigger: TTTTCTGACAAGTACCCTCCACCCTTTGCCACTCTT...ACAAAGCCAAAGTCCACCCACAATGAGTAAGAAGTGTAAATGAGAAATTGTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR CCA 90 bp AACACAATTTCTCATTTACACTTCTTACTCATTGTGGGTGGACTTTGGCTTTGTCTTACTCATTGTGGGTaGACTTTGGCTTTGTCACAG +
Preference number: 4 (lower is better)
Translates to: NTISHLHFLLIVGGLWLCLTHCG*TLALSQ
Trigger: CTGTGACAAAGCCAAAGTCCACCCACAATGAGTAAG...ACAAAGCCAAAGTCCACCCACAATGAGTAAGAAGTGTAAATGAGAAATTGTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR CCA 90 bp TCTGTTTTTAGGTCTTTGAGGAATCACCTACTGCTTTCCATAATGGGTGAAATACTTACTCATTGTGGGTaGACTTTGGCTTTGTCACAG +
Preference number: 4 (lower is better)
Translates to: SVFRSLRNHLLLSIMGEILTHCG*TLALSQ
Trigger: CTGTGACAAAGCCAAAGTCCACCCACAATGAGTAAG...TATTTCACCCATTATGGAAAGCAGTAGGTGATTCCTCAAAGACCTAAAAACAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR CCA 90 bp CAGTCAAATGGTATTTCTGTTTTTAGGTCTTTGAGGAATCACCTACTGCTTTCCACTTCTTACTCATTGTaGGTGGACTTTGGCTTTGTC +
Preference number: 4 (lower is better)
Translates to: QSNGISVFRSLRNHLLLSTSYSL*VDFGFV
Trigger: GACAAAGCCAAAGTCCACCCACAATGAGTAAGAAGT...GGAAAGCAGTAGGTGATTCCTCAAAGACCTAAAAACAGAAATACCATTTGACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR CCA 90 bp AGGAATCACCTACTGCTTTCCATAATGGGTGAAATAATTTACACTCCTACCAGCTTCACATCTGCTCCATaGATCTTCATCATGAGTCTA +
Preference number: 4 (lower is better)
Translates to: RNHLLLSIMGEIIYTPTSFTSAP*IFIMSL
Trigger: TAGACTCATGATGAAGATCCATGGAGCAGATGTGAA...GCTGGTAGGAGTGTAAATTATTTCACCCATTATGGAAAGCAGTAGGTGATTCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR TCA 90 bp CAGTCAAATGGTATTTCTGTTTTTAGGTCTTTGAGGAATCACCTACTGCTTTCCAGTCTTGAGCTGTCATaGGTTGAAATGCAAGATAGA +
Preference number: 4 (lower is better)
Translates to: QSNGISVFRSLRNHLLLSSLELS*VEMQDR
Trigger: TCTATCTTGCATTTCAACTCATGACAGCTCAAGACT...GGAAAGCAGTAGGTGATTCCTCAAAGACCTAAAAACAGAAATACCATTTGACTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR GCA 90 bp ACCTGTGAACATCATAGAGTGTATTTACACAAACCTAGATGGTATCGCTTGCTAACATACTCACGAATCTaGTTGGTCTTGACTCCATAT +
Preference number: 4 (lower is better)
Translates to: TCEHHRVYLHKPRWYRLLTYSRI*LVLTPY
Trigger: ATATGGAGTCAAGACCAAGCAGATTCGTGAGTATGT...TAGCAAGCGATACCATCTAGGTTTGTGTAAATACACTCTATGATGTTCACAGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR GCA 90 bp ACCTGTGAACATCATAGAGTGTATTTACACAAACCTAGATGGTATCGCTTGCTACTCCATCCATGTTCCTaGAAAGGACATGATCTTATT +
Preference number: 4 (lower is better)
Translates to: TCEHHRVYLHKPRWYRLLLHPCS*KGHDLI
Trigger: AATAAGATCATGTCCTTTGCAGGAACATGGATGGAG...TAGCAAGCGATACCATCTAGGTTTGTGTAAATACACTCTATGATGTTCACAGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR CCA 90 bp AAAGTTAATGCACACTTTAATTTGCAAAGAATAATGGCCTCTAGCTCCATCCATTACCAAACAGTTGGGTaGGACTATCGAGACTTCTGT +
Preference number: 4 (lower is better)
Translates to: KVNAHFNLQRIMASSSIHYQTVG*DYRDFC
Trigger: ACAGAAGTCTCGATAGTCCCACCCAACTGTTTGGTA...ATGGATGGAGCTAGAGGCCATTATTCTTTGCAAATTAAAGTGTGCATTAACTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR CCA 90 bp TTTCAGAAATCTCAGCTTCAAGAGGGAAGGGTGTTATTTCTCTTTTCATGGTTCTTCCTCACTCATACCTaGATAAAGAAGTCACCTGTT +
Preference number: 4 (lower is better)
Translates to: FQKSQLQEGRVLFLFSWFFLTHT*IKKSPV
Trigger: AACAGGTGACTTCTTTATCCAGGTATGAGTGAGGAA...GAACCATGAAAAGAGAAATAACACCCTTCCCTCTTGAAGCTGAGATTTCTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR CCA 90 bp CAGTCAAATGGTATTTCTGTTTTTAGGTCTTTGAGGAATCACCTACTGCTTTCCTTCCTCACTCATACCTaGATAAAGAAGTCACCTGTT +
Preference number: 4 (lower is better)
Translates to: QSNGISVFRSLRNHLLLSFLTHT*IKKSPV
Trigger: AACAGGTGACTTCTTTATCCAGGTATGAGTGAGGAA...GGAAAGCAGTAGGTGATTCCTCAAAGACCTAAAAACAGAAATACCATTTGACTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR CCA 90 bp TATGTATCACACACCTCTGCAATAACACGTGTCTATATGGACCAGGCAACTTCTGAGACTAAATATTGGTaGACAGTAATACAGTCTATC +
Preference number: 4 (lower is better)
Translates to: YVSHTSAITRVYMDQATSETKYW*TVIQSI
Trigger: GATAGACTGTATTACTGTCCACCAATATTTAGTCTC...AGAAGTTGCCTGGTCCATATAGACACGTGTTATTGCAGAGGTGTGTGATACATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR CCA 90 bp AGGAATCACCTACTGCTTTCCATAATGGGTGAAATAATTTACACTCCTACCAGCCAGGAGACTAAATATTaGTGGACAGTAATACAGTCT +
Preference number: 4 (lower is better)
Translates to: RNHLLLSIMGEIIYTPTSQETKY*WTVIQS
Trigger: AGACTGTATTACTGTCCACCAATATTTAGTCTCCTG...GCTGGTAGGAGTGTAAATTATTTCACCCATTATGGAAAGCAGTAGGTGATTCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR CCA 90 bp TATGTATCACACACCTCTGCAATAACACGTGTCTATATGGACCAGGCAACTTCTCTACTCAAATTTCATTaGCCAAATCAAGTCATACAG +
Preference number: 4 (lower is better)
Translates to: YVSHTSAITRVYMDQATSLLKFH*PNQVIQ
Trigger: CTGTATGACTTGATTTGGCCAATGAAATTTGAGTAG...AGAAGTTGCCTGGTCCATATAGACACGTGTTATTGCAGAGGTGTGTGATACATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR TCA 90 bp CAGTCAAATGGTATTTCTGTTTTTAGGTCTTTGAGGAATCACCTACTGCTTTCCACCCTCAAAGAAATTTaGATCTCATTGAGTAGATGG +
Preference number: 4 (lower is better)
Translates to: QSNGISVFRSLRNHLLLSTLKEI*ISLSRW
Trigger: CCATCTACTCAATGAGATTCAAATTTCTTTGAGGGT...GGAAAGCAGTAGGTGATTCCTCAAAGACCTAAAAACAGAAATACCATTTGACTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641528.1
CDS-3UTR TCA 90 bp CAGTCAAATGGTATTTCTGTTTTTAGGTCTTTGAGGAATCACCTACTGCTTTCCGCTTTCCATAATGGGTaGAATAATTTACACTCCTAC +
Preference number: 4 (lower is better)
Translates to: QSNGISVFRSLRNHLLLSAFHNG*NNLHSY
Trigger: GTAGGAGTGTAAATTATTTCACCCATTATGGAAAGC...GGAAAGCAGTAGGTGATTCCTCAAAGACCTAAAAACAGAAATACCATTTGACTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR TCA 90 bp AACACAATTTCTCATTTACACTTCTTACTCATTGTGGGTGGACTTTGGCTTTGTCTGTTTTTAGGTCTTTaGGGAATCACCTACTGCTTT +
Preference number: 4 (lower is better)
Translates to: NTISHLHFLLIVGGLWLCLFLGL*GITYCF
Trigger: AAAGCAGTAGGTGATTCCTCAAAGACCTAAAAACAG...ACAAAGCCAAAGTCCACCCACAATGAGTAAGAAGTGTAAATGAGAAATTGTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR GCA 90 bp ACCTGTGAACATCATAGAGTGTATTTACACAAACCTAGATGGTATCGCTTGCTATTTCCATTCGATCTTTaGACCAATATCATAGTGTCC +
Preference number: 4 (lower is better)
Translates to: TCEHHRVYLHKPRWYRLLFPFDL*TNIIVS
Trigger: GGACACTATGATATTGGTGCAAAGATCGAATGGAAA...TAGCAAGCGATACCATCTAGGTTTGTGTAAATACACTCTATGATGTTCACAGGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR GCA 90 bp CAGTCAAATGGTATTTCTGTTTTTAGGTCTTTGAGGAATCACCTACTGCTTTCCTTTCCATTCGATCTTTaGACCAATATCATAGTGTCC +
Preference number: 4 (lower is better)
Translates to: QSNGISVFRSLRNHLLLSFPFDL*TNIIVS
Trigger: GGACACTATGATATTGGTGCAAAGATCGAATGGAAA...GGAAAGCAGTAGGTGATTCCTCAAAGACCTAAAAACAGAAATACCATTTGACTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR GCA 90 bp ACCTGTGAACATCATAGAGTGTATTTACACAAACCTAGATGGTATCGCTTGCTATGTATCACACACCTCTaGAATAACACGTGTCTATAT +
Preference number: 4 (lower is better)
Translates to: TCEHHRVYLHKPRWYRLLCITHL*NNTCLY
Trigger: ATATAGACACGTGTTATTGCAGAGGTGTGTGATACA...TAGCAAGCGATACCATCTAGGTTTGTGTAAATACACTCTATGATGTTCACAGGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR GCA 90 bp TTTCAGAAATCTCAGCTTCAAGAGGGAAGGGTGTTATTTCTCTTTTCATGGTTCTATAGTATTCCATGGTaGATATGTATCACACACCTC +
Preference number: 4 (lower is better)
Translates to: FQKSQLQEGRVLFLFSWFYSIPW*ICITHL
Trigger: GAGGTGTGTGATACATATGCACCATGGAATACTATA...GAACCATGAAAAGAGAAATAACACCCTTCCCTCTTGAAGCTGAGATTTCTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR CCA 90 bp AAAGTTAATGCACACTTTAATTTGCAAAGAATAATGGCCTCTAGCTCCATCCATTCTGACTTACAATCCTaGGCCCTTTTCATTAGCTTC +
Preference number: 4 (lower is better)
Translates to: KVNAHFNLQRIMASSSIHSDLQS*ALFISF
Trigger: GAAGCTAATGAAAAGGGCCCAGGATTGTAAGTCAGA...ATGGATGGAGCTAGAGGCCATTATTCTTTGCAAATTAAAGTGTGCATTAACTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR GCA 90 bp AAAGTTAATGCACACTTTAATTTGCAAAGAATAATGGCCTCTAGCTCCATCCATTGGAGGCAAAAGACATaGAGTGAAAAGCTAGATACA +
Preference number: 4 (lower is better)
Translates to: KVNAHFNLQRIMASSSIHWRQKT*SEKLDT
Trigger: TGTATCTAGCTTTTCACTGCATGTCTTTTGCCTCCA...ATGGATGGAGCTAGAGGCCATTATTCTTTGCAAATTAAAGTGTGCATTAACTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR CCA 90 bp ACCTGTGAACATCATAGAGTGTATTTACACAAACCTAGATGGTATCGCTTGCTAGAGACTAAATATTGGTaGACAGTAATACAGTCTATC +
Preference number: 4 (lower is better)
Translates to: TCEHHRVYLHKPRWYRLLETKYW*TVIQSI
Trigger: GATAGACTGTATTACTGTCCACCAATATTTAGTCTC...TAGCAAGCGATACCATCTAGGTTTGTGTAAATACACTCTATGATGTTCACAGGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR CCA 90 bp CAGTCAAATGGTATTTCTGTTTTTAGGTCTTTGAGGAATCACCTACTGCTTTCCCTACTCAAATTTCATTaGCCAAATCAAGTCATACAG +
Preference number: 4 (lower is better)
Translates to: QSNGISVFRSLRNHLLLSLLKFH*PNQVIQ
Trigger: CTGTATGACTTGATTTGGCCAATGAAATTTGAGTAG...GGAAAGCAGTAGGTGATTCCTCAAAGACCTAAAAACAGAAATACCATTTGACTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR GCA 90 bp AAAGTTAATGCACACTTTAATTTGCAAAGAATAATGGCCTCTAGCTCCATCCATTATAGTATTCCATGGTaGATATGTATCACACACCTC +
Preference number: 4 (lower is better)
Translates to: KVNAHFNLQRIMASSSIHYSIPW*ICITHL
Trigger: GAGGTGTGTGATACATATGCACCATGGAATACTATA...ATGGATGGAGCTAGAGGCCATTATTCTTTGCAAATTAAAGTGTGCATTAACTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
3UTR CAA 72 bp ATTTCCTTTAAATATTCAGTCTTGAGCTGTCATGAGTaGAAATGCAAGATAGAACTCACAACTCCAGCAATT +
Preference number: 4 (lower is better)
Translates to: ISFKYSVLSCHE*KCKIELTTPAI
Trigger: AATTGCTGGAGTTGTGAGTTCTATCTTGCATTTCAACTCATGACAGCTCAAGACTGAATATTTAAAGGAAAT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR CAA 90 bp GTCCTCTCTCTCTCTCCTTCTTGGCTGCCAAACAGGGAAGGGCCCCCTGTCCAGGGCTATGGGAAGAAATaGACAGTGCCCCCACCTTCC +
Preference number: 5 (lower is better)
Translates to: VLSLSPSWLPNREGPPVQGYGKK*TVPPPS
Trigger: GGAAGGTGGGGGCACTGTCAATTTCTTCCCATAGCC...CTGGACAGGGGGCCCTTCCCTGTTTGGCAGCCAAGAAGGAGAGAGAGAGAGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR CAA 90 bp ATGATCTCTCATCTCTGCACACAAGGGGAAAAACTCACAGACCCTGTAGGGCTGGAACTTTGCTGGGTTTaGCAGCAGAGGGGAAAGAAA +
Preference number: 5 (lower is better)
Translates to: MISHLCTQGEKLTDPVGLELCWV*QQRGKK
Trigger: TTTCTTTCCCCTCTGCTGCAAAACCCAGCAAAGTTC...CAGCCCTACAGGGTCTGTGAGTTTTTCCCCTTGTGTGCAGAGATGAGAGATCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR CAA 90 bp TGGGAAGGTCAAACCTCTACTATCAGACCAGACTATAGGTGCACTCCTGGTTTGGAGAGCATCTGGAGTTaGTGTACCAAACAGTTGGGT +
Preference number: 5 (lower is better)
Translates to: WEGQTSTIRPDYRCTPGLESIWS*CTKQLG
Trigger: ACCCAACTGTTTGGTACACAAACTCCAGATGCTCTC...CAAACCAGGAGTGCACCTATAGTCTGGTCTGATAGTAGAGGTTTGACCTTCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR CAA 90 bp AGAAGAAATAATGGTGTAAGCTGTCCTCTCTCTCTCTCCTTCTTGGCTGCCAAAAAGGGTGGAGGGTACTaGTCAGAAAAGACATGGGGG +
Preference number: 5 (lower is better)
Translates to: RRNNGVSCPLSLSFLAAKKGGGY*SEKTWG
Trigger: CCCCCATGTCTTTTCTGACAAGTACCCTCCACCCTT...TTTGGCAGCCAAGAAGGAGAGAGAGAGAGGACAGCTTACACCATTATTTCTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR CAA 90 bp TGGGAAGGTCAAACCTCTACTATCAGACCAGACTATAGGTGCACTCCTGGTTTGAGCAATTGGTGCTCCTaGGGTAAGGCTGTGAAACAA +
Preference number: 5 (lower is better)
Translates to: WEGQTSTIRPDYRCTPGLSNWCS*GKAVKQ
Trigger: TTGTTTCACAGCCTTACCCAAGGAGCACCAATTGCT...CAAACCAGGAGTGCACCTATAGTCTGGTCTGATAGTAGAGGTTTGACCTTCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR CAA 90 bp TATGTATCACACACCTCTGCAATAACACGTGTCTATATGGACCAGGCAACTTCTAAGAGAAGGGTACAGTaGCCTAGCAGGGCCAGAGTA +
Preference number: 5 (lower is better)
Translates to: YVSHTSAITRVYMDQATSKRRVQ*PSRARV
Trigger: TACTCTGGCCCTGCTAGGCAACTGTACCCTTCTCTT...AGAAGTTGCCTGGTCCATATAGACACGTGTTATTGCAGAGGTGTGTGATACATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR CAA 90 bp TTTCAGAAATCTCAGCTTCAAGAGGGAAGGGTGTTATTTCTCTTTTCATGGTTCGGCTATGGGAAGAAATaGACAGTGCCCCCACCTTCC +
Preference number: 5 (lower is better)
Translates to: FQKSQLQEGRVLFLFSWFGYGKK*TVPPPS
Trigger: GGAAGGTGGGGGCACTGTCAATTTCTTCCCATAGCC...GAACCATGAAAAGAGAAATAACACCCTTCCCTCTTGAAGCTGAGATTTCTGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR CAA 90 bp AGAAGAAATAATGGTGTAAGCTGTCCTCTCTCTCTCTCCTTCTTGGCTGCCAAACTTCTGTTCCCTCTATaGAAGGACCAGAGTAGAAGC +
Preference number: 5 (lower is better)
Translates to: RRNNGVSCPLSLSFLAAKLLFPL*KDQSRS
Trigger: GCTTCTACTCTGGTCCTTCAATAGAGGGAACAGAAG...TTTGGCAGCCAAGAAGGAGAGAGAGAGAGGACAGCTTACACCATTATTTCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR CAA 90 bp AGGAATCACCTACTGCTTTCCATAATGGGTGAAATAATTTACACTCCTACCAGCAAGAGAAGGGTACAGTaGCCTAGCAGGGCCAGAGTA +
Preference number: 5 (lower is better)
Translates to: RNHLLLSIMGEIIYTPTSKRRVQ*PSRARV
Trigger: TACTCTGGCCCTGCTAGGCAACTGTACCCTTCTCTT...GCTGGTAGGAGTGTAAATTATTTCACCCATTATGGAAAGCAGTAGGTGATTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR CAA 90 bp TGGGAAGGTCAAACCTCTACTATCAGACCAGACTATAGGTGCACTCCTGGTTTGTACTCACGAATCTGCTaGGTCTTGACTCCATATATG +
Preference number: 5 (lower is better)
Translates to: WEGQTSTIRPDYRCTPGLYSRIC*VLTPYM
Trigger: CATATATGGAGTCAAGACCAAGCAGATTCGTGAGTA...CAAACCAGGAGTGCACCTATAGTCTGGTCTGATAGTAGAGGTTTGACCTTCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR CAA 90 bp AGAAGAAATAATGGTGTAAGCTGTCCTCTCTCTCTCTCCTTCTTGGCTGCCAAAATATGGTATAGCCTGTaGCTCCTAGGCTACAAACCC +
Preference number: 5 (lower is better)
Translates to: RRNNGVSCPLSLSFLAAKIWYSL*LLGYKP
Trigger: GGGTTTGTAGCCTAGGAGCAACAGGCTATACCATAT...TTTGGCAGCCAAGAAGGAGAGAGAGAGAGGACAGCTTACACCATTATTTCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR CAA 90 bp ATGATCTCTCATCTCTGCACACAAGGGGAAAAACTCACAGACCCTGTAGGGCTGTCTGTTTTTAGGTCTTaGAGGAATCACCTACTGCTT +
Preference number: 5 (lower is better)
Translates to: MISHLCTQGEKLTDPVGLSVFRS*RNHLLL
Trigger: AAGCAGTAGGTGATTCCTCAAAGACCTAAAAACAGA...CAGCCCTACAGGGTCTGTGAGTTTTTCCCCTTGTGTGCAGAGATGAGAGATCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR CAA 90 bp AGGAATCACCTACTGCTTTCCATAATGGGTGAAATAATTTACACTCCTACCAGCGGGTGGACTTTGGCTTaGTCACAGCCTCTAACTGGA +
Preference number: 5 (lower is better)
Translates to: RNHLLLSIMGEIIYTPTSGWTLA*SQPLTG
Trigger: TCCAGTTAGAGGCTGTGACAAAGCCAAAGTCCACCC...GCTGGTAGGAGTGTAAATTATTTCACCCATTATGGAAAGCAGTAGGTGATTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR CAA 90 bp TCCTTGTTCATGTTATATGAACACTGTGGGTCAGTTATGACTATGCTACAGGCAGGGTGGACTTTGGCTTaGTCACAGCCTCTAACTGGA +
Preference number: 5 (lower is better)
Translates to: SLFMLYEHCGSVMTMLQAGWTLA*SQPLTG
Trigger: TCCAGTTAGAGGCTGTGACAAAGCCAAAGTCCACCC...TGCCTGTAGCATAGTCATAACTGACCCACAGTGTTCATATAACATGAACAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR CAA 90 bp TGGGAAGGTCAAACCTCTACTATCAGACCAGACTATAGGTGCACTCCTGGTTTGTACACTTCTTACTCATaGTGGGTGGACTTTGGCTTT +
Preference number: 5 (lower is better)
Translates to: WEGQTSTIRPDYRCTPGLYTSYS*WVDFGF
Trigger: AAAGCCAAAGTCCACCCACAATGAGTAAGAAGTGTA...CAAACCAGGAGTGCACCTATAGTCTGGTCTGATAGTAGAGGTTTGACCTTCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR CAA 90 bp AGAAGAAATAATGGTGTAAGCTGTCCTCTCTCTCTCTCCTTCTTGGCTGCCAAATTCTATTTCCCTAAGTaGCAGCTGTATCCACAGTCC +
Preference number: 5 (lower is better)
Translates to: RRNNGVSCPLSLSFLAAKFYFPK*QLYPQS
Trigger: GGACTGTGGATACAGCTGCAACTTAGGGAAATAGAA...TTTGGCAGCCAAGAAGGAGAGAGAGAGAGGACAGCTTACACCATTATTTCTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR CAA 90 bp TATGTATCACACACCTCTGCAATAACACGTGTCTATATGGACCAGGCAACTTCTGAGAGCATCTGGAGTTaGTGTACCAAACAGTTGGGT +
Preference number: 5 (lower is better)
Translates to: YVSHTSAITRVYMDQATSESIWS*CTKQLG
Trigger: ACCCAACTGTTTGGTACACAAACTCCAGATGCTCTC...AGAAGTTGCCTGGTCCATATAGACACGTGTTATTGCAGAGGTGTGTGATACATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR CAA 90 bp ATGATCTCTCATCTCTGCACACAAGGGGAAAAACTCACAGACCCTGTAGGGCTGTTGTGTCACGGGAGTTaGTTGTACAAGTTCTTTAAT +
Preference number: 5 (lower is better)
Translates to: MISHLCTQGEKLTDPVGLLCHGS*LYKFFN
Trigger: ATTAAAGAACTTGTACAACAAACTCCCGTGACACAA...CAGCCCTACAGGGTCTGTGAGTTTTTCCCCTTGTGTGCAGAGATGAGAGATCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR CAA 90 bp TCAACCATTGGAGATGACTCACACTCTTTACCCTGCCCCTTTTGCCTTGTATCCCTTTCCATTCGATCTTaGCACCAATATCATAGTGTC +
Preference number: 5 (lower is better)
Translates to: STIGDDSHSLPCPFCLVSLSIRS*HQYHSV
Trigger: GACACTATGATATTGGTGCAAAGATCGAATGGAAAG...GGATACAAGGCAAAAGGGGCAGGGTAAAGAGTGTGAGTCATCTCCAATGGTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR CAA 90 bp TCCTTGTTCATGTTATATGAACACTGTGGGTCAGTTATGACTATGCTACAGGCACATTGTGGGTGGACTTaGGCTTTGTCACAGCCTCTA +
Preference number: 5 (lower is better)
Translates to: SLFMLYEHCGSVMTMLQAHCGWT*ALSQPL
Trigger: TAGAGGCTGTGACAAAGCCAAAGTCCACCCACAATG...TGCCTGTAGCATAGTCATAACTGACCCACAGTGTTCATATAACATGAACAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR CAA 90 bp AACTTGTGTCACGGGAGTTTGTTGTACAAGTTCTTTAATCACCTAGGTACTAGGATATGGTATAGCCTGTaGCTCCTAGGCTACAAACCC +
Preference number: 5 (lower is better)
Translates to: NLCHGSLLYKFFNHLGTRIWYSL*LLGYKP
Trigger: GGGTTTGTAGCCTAGGAGCAACAGGCTATACCATAT...CCTAGTACCTAGGTGATTAAAGAACTTGTACAACAAACTCCCGTGACACAAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR CAA 90 bp TGGGAAGGTCAAACCTCTACTATCAGACCAGACTATAGGTGCACTCCTGGTTTGGCTACTCAAATTTCATaGGCCAAATCAAGTCATACA +
Preference number: 5 (lower is better)
Translates to: WEGQTSTIRPDYRCTPGLATQIS*AKSSHT
Trigger: TGTATGACTTGATTTGGCCAATGAAATTTGAGTAGC...CAAACCAGGAGTGCACCTATAGTCTGGTCTGATAGTAGAGGTTTGACCTTCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR CAA 90 bp AGGAATCACCTACTGCTTTCCATAATGGGTGAAATAATTTACACTCCTACCAGCGTCTCCTGCTCCTCTTaGTGTCCATGTGTTCTCATT +
Preference number: 5 (lower is better)
Translates to: RNHLLLSIMGEIIYTPTSVSCSS*CPCVLI
Trigger: AATGAGAACACATGGACACAAAGAGGAGCAGGAGAC...GCTGGTAGGAGTGTAAATTATTTCACCCATTATGGAAAGCAGTAGGTGATTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR CAA 90 bp ACCTGTGAACATCATAGAGTGTATTTACACAAACCTAGATGGTATCGCTTGCTATTGTGTACCAAACAGTaGGGTGGGACTATCGAGACT +
Preference number: 5 (lower is better)
Translates to: TCEHHRVYLHKPRWYRLLLCTKQ*GGTIET
Trigger: AGTCTCGATAGTCCCACCCAACTGTTTGGTACACAA...TAGCAAGCGATACCATCTAGGTTTGTGTAAATACACTCTATGATGTTCACAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR CAA 90 bp AGAAATAATGGTGTAAGCTGTCCTCTCTCTCTCTCCTTCTTGGCTGCCAAACAGGATTACAATACCACTTaGAGAGGTTTGTCTTCCTTA +
Preference number: 5 (lower is better)
Translates to: RNNGVSCPLSLSFLAAKQDYNTT*RGLSSL
Trigger: TAAGGAAGACAAACCTCTCAAAGTGGTATTGTAATC...CTGTTTGGCAGCCAAGAAGGAGAGAGAGAGAGGACAGCTTACACCATTATTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR CAA 90 bp TTTCAGAAATCTCAGCTTCAAGAGGGAAGGGTGTTATTTCTCTTTTCATGGTTCGTCTCCTGCTCCTCTTaGTGTCCATGTGTTCTCATT +
Preference number: 5 (lower is better)
Translates to: FQKSQLQEGRVLFLFSWFVSCSS*CPCVLI
Trigger: AATGAGAACACATGGACACAAAGAGGAGCAGGAGAC...GAACCATGAAAAGAGAAATAACACCCTTCCCTCTTGAAGCTGAGATTTCTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR CAA 90 bp CAGTCAAATGGTATTTCTGTTTTTAGGTCTTTGAGGAATCACCTACTGCTTTCCGAACTTTGCTGGGTTTaGCAGCAGAGGGGAAAGAAA +
Preference number: 5 (lower is better)
Translates to: QSNGISVFRSLRNHLLLSELCWV*QQRGKK
Trigger: TTTCTTTCCCCTCTGCTGCAAAACCCAGCAAAGTTC...GGAAAGCAGTAGGTGATTCCTCAAAGACCTAAAAACAGAAATACCATTTGACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR CAA 90 bp TCTGTTTTTAGGTCTTTGAGGAATCACCTACTGCTTTCCATAATGGGTGAAATACATTGTGGGTGGACTTaGGCTTTGTCACAGCCTCTA +
Preference number: 5 (lower is better)
Translates to: SVFRSLRNHLLLSIMGEIHCGWT*ALSQPL
Trigger: TAGAGGCTGTGACAAAGCCAAAGTCCACCCACAATG...TATTTCACCCATTATGGAAAGCAGTAGGTGATTCCTCAAAGACCTAAAAACAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR CAA 90 bp CAGTCAAATGGTATTTCTGTTTTTAGGTCTTTGAGGAATCACCTACTGCTTTCCAGCAATTGGTGCTCCTaGGGTAAGGCTGTGAAACAA +
Preference number: 5 (lower is better)
Translates to: QSNGISVFRSLRNHLLLSSNWCS*GKAVKQ
Trigger: TTGTTTCACAGCCTTACCCAAGGAGCACCAATTGCT...GGAAAGCAGTAGGTGATTCCTCAAAGACCTAAAAACAGAAATACCATTTGACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR CAA 90 bp AGAAGAAATAATGGTGTAAGCTGTCCTCTCTCTCTCTCCTTCTTGGCTGCCAAATTGAGCTGTCATGAGTaGAAATGCAAGATAGAACTC +
Preference number: 5 (lower is better)
Translates to: RRNNGVSCPLSLSFLAAKLSCHE*KCKIEL
Trigger: GAGTTCTATCTTGCATTTCAACTCATGACAGCTCAA...TTTGGCAGCCAAGAAGGAGAGAGAGAGAGGACAGCTTACACCATTATTTCTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR CAA 90 bp TCCTTGTTCATGTTATATGAACACTGTGGGTCAGTTATGACTATGCTACAGGCATGTTCACTAAAGGAATaGGCCATGTCTATCAGGAAG +
Preference number: 5 (lower is better)
Translates to: SLFMLYEHCGSVMTMLQACSLKE*AMSIRK
Trigger: CTTCCTGATAGACATGGCCAATTCCTTTAGTGAACA...TGCCTGTAGCATAGTCATAACTGACCCACAGTGTTCATATAACATGAACAAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR CAA 90 bp AACACAATTTCTCATTTACACTTCTTACTCATTGTGGGTGGACTTTGGCTTTGTTTCTATTTCCCTAAGTaGCAGCTGTATCCACAGTCC +
Preference number: 5 (lower is better)
Translates to: NTISHLHFLLIVGGLWLCFYFPK*QLYPQS
Trigger: GGACTGTGGATACAGCTGCAACTTAGGGAAATAGAA...ACAAAGCCAAAGTCCACCCACAATGAGTAAGAAGTGTAAATGAGAAATTGTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR CAA 90 bp AAAGTTAATGCACACTTTAATTTGCAAAGAATAATGGCCTCTAGCTCCATCCATTTGTGTACCAAACAGTaGGGTGGGACTATCGAGACT +
Preference number: 5 (lower is better)
Translates to: KVNAHFNLQRIMASSSIHLCTKQ*GGTIET
Trigger: AGTCTCGATAGTCCCACCCAACTGTTTGGTACACAA...ATGGATGGAGCTAGAGGCCATTATTCTTTGCAAATTAAAGTGTGCATTAACTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR CAA 90 bp CAGTCAAATGGTATTTCTGTTTTTAGGTCTTTGAGGAATCACCTACTGCTTTCCCTCCTGGAAATCTCCTaGTCAATTTTTACAGGGCTT +
Preference number: 5 (lower is better)
Translates to: QSNGISVFRSLRNHLLLSLLEIS*SIFTGL
Trigger: AAGCCCTGTAAAAATTGACAAGGAGATTTCCAGGAG...GGAAAGCAGTAGGTGATTCCTCAAAGACCTAAAAACAGAAATACCATTTGACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000641528.1
CDS-3UTR CAA 90 bp TTTCAGAAATCTCAGCTTCAAGAGGGAAGGGTGTTATTTCTCTTTTCATGGTTCTACTCACGAATCTGCTaGGTCTTGACTCCATATATG +
Preference number: 5 (lower is better)
Translates to: FQKSQLQEGRVLFLFSWFYSRIC*VLTPYM
Trigger: CATATATGGAGTCAAGACCAAGCAGATTCGTGAGTA...GAACCATGAAAAGAGAAATAACACCCTTCCCTCTTGAAGCTGAGATTTCTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR CAA 90 bp AGGAATCACCTACTGCTTTCCATAATGGGTGAAATAATTTACACTCCTACCAGCTCTGTTTTTAGGTCTTaGAGGAATCACCTACTGCTT +
Preference number: 5 (lower is better)
Translates to: RNHLLLSIMGEIIYTPTSSVFRS*RNHLLL
Trigger: AAGCAGTAGGTGATTCCTCAAAGACCTAAAAACAGA...GCTGGTAGGAGTGTAAATTATTTCACCCATTATGGAAAGCAGTAGGTGATTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR CAA 90 bp TCCTTGTTCATGTTATATGAACACTGTGGGTCAGTTATGACTATGCTACAGGCACTTTCCATTCGATCTTaGCACCAATATCATAGTGTC +
Preference number: 5 (lower is better)
Translates to: SLFMLYEHCGSVMTMLQALSIRS*HQYHSV
Trigger: GACACTATGATATTGGTGCAAAGATCGAATGGAAAG...TGCCTGTAGCATAGTCATAACTGACCCACAGTGTTCATATAACATGAACAAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR CAA 90 bp AACTTGTGTCACGGGAGTTTGTTGTACAAGTTCTTTAATCACCTAGGTACTAGGTTGAGCTGTCATGAGTaGAAATGCAAGATAGAACTC +
Preference number: 5 (lower is better)
Translates to: NLCHGSLLYKFFNHLGTRLSCHE*KCKIEL
Trigger: GAGTTCTATCTTGCATTTCAACTCATGACAGCTCAA...CCTAGTACCTAGGTGATTAAAGAACTTGTACAACAAACTCCCGTGACACAAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR CAA 90 bp TCCTTGTTCATGTTATATGAACACTGTGGGTCAGTTATGACTATGCTACAGGCATGCAAAGATTACCTCTaGTTTCCATTGCTAGACTTT +
Preference number: 5 (lower is better)
Translates to: SLFMLYEHCGSVMTMLQACKDYL*FPLLDF
Trigger: AAAGTCTAGCAATGGAAACAAGAGGTAATCTTTGCA...TGCCTGTAGCATAGTCATAACTGACCCACAGTGTTCATATAACATGAACAAGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641528.1
CDS-3UTR CAA 90 bp TCCTTGTTCATGTTATATGAACACTGTGGGTCAGTTATGACTATGCTACAGGCAAAAGGAATAATGGTTTaGGGGTCACAAAATTTGAGG +
Preference number: 5 (lower is better)
Translates to: SLFMLYEHCGSVMTMLQAKGIMV*GSQNLR
Trigger: CCTCAAATTTTGTGACCCCAAAACCATTATTCCTTT...TGCCTGTAGCATAGTCATAACTGACCCACAGTGTTCATATAACATGAACAAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR CAA 90 bp TCTGTTTTTAGGTCTTTGAGGAATCACCTACTGCTTTCCATAATGGGTGAAATATGTTCACTAAAGGAATaGGCCATGTCTATCAGGAAG +
Preference number: 5 (lower is better)
Translates to: SVFRSLRNHLLLSIMGEICSLKE*AMSIRK
Trigger: CTTCCTGATAGACATGGCCAATTCCTTTAGTGAACA...TATTTCACCCATTATGGAAAGCAGTAGGTGATTCCTCAAAGACCTAAAAACAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR CAA 90 bp TTTCAGAAATCTCAGCTTCAAGAGGGAAGGGTGTTATTTCTCTTTTCATGGTTCTGTCACGGGAGTTTGTaGTACAAGTTCTTTAATCAC +
Preference number: 5 (lower is better)
Translates to: FQKSQLQEGRVLFLFSWFCHGSL*YKFFNH
Trigger: GTGATTAAAGAACTTGTACAACAAACTCCCGTGACA...GAACCATGAAAAGAGAAATAACACCCTTCCCTCTTGAAGCTGAGATTTCTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR CAA 90 bp TCTGTTTTTAGGTCTTTGAGGAATCACCTACTGCTTTCCATAATGGGTGAAATATACACTTCTTACTCATaGTGGGTGGACTTTGGCTTT +
Preference number: 5 (lower is better)
Translates to: SVFRSLRNHLLLSIMGEIYTSYS*WVDFGF
Trigger: AAAGCCAAAGTCCACCCACAATGAGTAAGAAGTGTA...TATTTCACCCATTATGGAAAGCAGTAGGTGATTCCTCAAAGACCTAAAAACAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR CAA 90 bp CAGTCAAATGGTATTTCTGTTTTTAGGTCTTTGAGGAATCACCTACTGCTTTCCGATTACAATACCACTTaGAGAGGTTTGTCTTCCTTA +
Preference number: 5 (lower is better)
Translates to: QSNGISVFRSLRNHLLLSDYNTT*RGLSSL
Trigger: TAAGGAAGACAAACCTCTCAAAGTGGTATTGTAATC...GGAAAGCAGTAGGTGATTCCTCAAAGACCTAAAAACAGAAATACCATTTGACTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR CAA 90 bp ACCTGTGAACATCATAGAGTGTATTTACACAAACCTAGATGGTATCGCTTGCTATATTCCCCTTTTAGTTaGCAAAGAATAATGGCCTCT +
Preference number: 5 (lower is better)
Translates to: TCEHHRVYLHKPRWYRLLYSPFS*QRIMAS
Trigger: AGAGGCCATTATTCTTTGCAAACTAAAAGGGGAATA...TAGCAAGCGATACCATCTAGGTTTGTGTAAATACACTCTATGATGTTCACAGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR CAA 90 bp CAGTCAAATGGTATTTCTGTTTTTAGGTCTTTGAGGAATCACCTACTGCTTTCCTTGTGTCACGGGAGTTaGTTGTACAAGTTCTTTAAT +
Preference number: 5 (lower is better)
Translates to: QSNGISVFRSLRNHLLLSLCHGS*LYKFFN
Trigger: ATTAAAGAACTTGTACAACAAACTCCCGTGACACAA...GGAAAGCAGTAGGTGATTCCTCAAAGACCTAAAAACAGAAATACCATTTGACTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS-3UTR CAA 90 bp AAAGTTAATGCACACTTTAATTTGCAAAGAATAATGGCCTCTAGCTCCATCCATTGTCACGGGAGTTTGTaGTACAAGTTCTTTAATCAC +
Preference number: 5 (lower is better)
Translates to: KVNAHFNLQRIMASSSIHCHGSL*YKFFNH
Trigger: GTGATTAAAGAACTTGTACAACAAACTCCCGTGACA...ATGGATGGAGCTAGAGGCCATTATTCTTTGCAAATTAAAGTGTGCATTAACTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS CAA 72 bp CTGATGCCTAAGATCAGGAATGGCTATGGGAAGAAATaGACAGTGCCCCCACCTTCCAGCTCACTCCCACCT +
Preference number: 6 (lower is better)
Translates to: LMPKIRNGYGKK*TVPPPSSSLPP
Trigger: AGGTGGGAGTGAGCTGGAAGGTGGGGGCACTGTCAATTTCTTCCCATAGCCATTCCTGATCTTAGGCATCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1
CDS GCA 72 bp CTGACTTACAATCCTGGGCCCTTTTCATTAGCTTCATaGAGCACCAGTGCCGCCTTCCTCTTTCAGTCTAAG +
Preference number: 6 (lower is better)
Translates to: LTYNPGPFSLAS*STSAAFLFQSK
Trigger: CTTAGACTGAAAGAGGAAGGCGGCACTGGTGCTGCATGAAGCTAATGAAAAGGGCCCAGGATTGTAAGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641528.1
ENST00000642020.1