RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OR52I2 (Homo sapiens)

Ensembl gene IDs: ENSG00000226288

Ensembl transcript IDs: ENST00000641896.1

Found 127 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGTATAGGAAGAGTAAAGGCTTATATTTTCTATTCTGGGGTGATCTaGCCTTCAGACTCCATCAGCCCAACACTAATGCCCAAGTCAGTT +
Preference number: 1 (lower is better)
Translates to: CIGRVKAYIFYSGVI*PSDSISPTLMPKSV
Trigger: AACTGACTTGGGCATTAGTGTTGGGCTGATGGAGTCTGAAGGCCAGATCACCCCAGAATAGAAAATATAAGCCTTTACTCTTCCTATACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641896.1
3UTR-3UTR GCA 90 bp GGCCTCTACCCAGCAACCAAACATTGCTACTCCTCAAGAGACTGGTTTATCTTTACATTTCCTCAGTTCTaGCTGGGGACTCGGGCCAGG +
Preference number: 2 (lower is better)
Translates to: GLYPATKHCYSSRDWFIFTFPQF*LGTRAR
Trigger: CCTGGCCCGAGTCCCCAGGCAGAACTGAGGAAATGT...AAAGATAAACCAGTCTCTTGAGGAGTAGCAATGTTTGGTTGCTGGGTAGAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641896.1
3UTR-3UTR TCA 90 bp TTCTGGGGTGATCTGGCCTTCAGACTCCATCAGCCCAACACTAATGCCCAAGTCCAGATGCTTACTGGCTaGAGAGTCTGTTTCTTCAAG +
Preference number: 2 (lower is better)
Translates to: FWGDLAFRLHQPNTNAQVQMLTG*RVCFFK
Trigger: CTTGAAGAAACAGACTCTTCAGCCAGTAAGCATCTG...GACTTGGGCATTAGTGTTGGGCTGATGGAGTCTGAAGGCCAGATCACCCCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641896.1
3UTR-3UTR GCA 90 bp TATCCTTACCCTTGGATACTGTCTCAAGCTACCTCTTTTTACCTCTTGTCAGGGCCCTGCACCTGCCTTTaGCTTCAATACTGTGGGGAT +
Preference number: 2 (lower is better)
Translates to: YPYPWILSQATSFYLLSGPCTCL*LQYCGD
Trigger: ATCCCCACAGTATTGAAGGCAAAGGCAGGTGCAGGG...CCCTGACAAGAGGTAAAAAGAGGTAGCTTGAGACAGTATCCAAGGGTAAGGATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641896.1
3UTR-3UTR CCA 90 bp TATCCTTACCCTTGGATACTGTCTCAAGCTACCTCTTTTTACCTCTTGTCAGGGCCAAAGACTTCTCATTaGGGCCCTCTTTTCCCTCTG +
Preference number: 2 (lower is better)
Translates to: YPYPWILSQATSFYLLSGPKTSH*GPLFPL
Trigger: CAGAGGGAAAAGAGGGCCCCAATGAGAAGTCTTTGG...CCCTGACAAGAGGTAAAAAGAGGTAGCTTGAGACAGTATCCAAGGGTAAGGATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641896.1
3UTR-3UTR TCA 90 bp TACCCACAGTCTGAGAGTTTTCTCTGTTTAACTTTCTCCAATGAGTCCATGCCTCATTTTAAGAGTTGGTaGGGCAGGAGCAGGAAGAGG +
Preference number: 2 (lower is better)
Translates to: YPQSESFLCLTFSNESMPHFKSW*GRSRKR
Trigger: CCTCTTCCTGCTCCTGCCTCACCAACTCTTAAAATG...AGGCATGGACTCATTGGAGAAAGTTAAACAGAGAAAACTCTCAGACTGTGGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641896.1
3UTR-3UTR TCA 90 bp TTAGCGTTGCTGGAGATTTACATTGTCAGTCTTTGCAAAGAACAGGACACTCGGTTCATGTCTTCTGCCTaGGCATCATCTGTGGAAAGG +
Preference number: 2 (lower is better)
Translates to: LALLEIYIVSLCKEQDTRFMSSA*ASSVER
Trigger: CCTTTCCACAGATGATGCTCAGGCAGAAGACATGAA...CCGAGTGTCCTGTTCTTTGCAAAGACTGACAATGTAAATCTCCAGCAACGCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641896.1
3UTR-3UTR TCA 90 bp CCCAGCAACCAAACATTGCTACTCCTCAAGAGACTGGTTTATCTTTGTGCTCTGGTTAGATGTTTCCCATaGCGCTGTTATAGCATCCTG +
Preference number: 2 (lower is better)
Translates to: PSNQTLLLLKRLVYLCALVRCFP*RCYSIL
Trigger: CAGGATGCTATAACAGCGTCATGGGAAACATCTAAC...CAGAGCACAAAGATAAACCAGTCTCTTGAGGAGTAGCAATGTTTGGTTGCTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641896.1
3UTR-3UTR GCA 90 bp TTAGCGTTGCTGGAGATTTACATTGTCAGTCTTTGCAAAGAACAGGACACTCGGCCAGCAACCAAACATTaGTACTCCTCAAGAGACTGG +
Preference number: 2 (lower is better)
Translates to: LALLEIYIVSLCKEQDTRPATKH*YSSRDW
Trigger: CCAGTCTCTTGAGGAGTAGCAATGTTTGGTTGCTGG...CCGAGTGTCCTGTTCTTTGCAAAGACTGACAATGTAAATCTCCAGCAACGCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641896.1
3UTR-3UTR TCA 90 bp TACCCACAGTCTGAGAGTTTTCTCTGTTTAACTTTCTCCAATGAGTCCATGCCTGATAGGGCATGCACCTaGGCACAAAAGTATGAGAAG +
Preference number: 2 (lower is better)
Translates to: YPQSESFLCLTFSNESMPDRACT*AQKYEK
Trigger: CTTCTCATACTTTTGTGCTCAGGTGCATGCCCTATC...AGGCATGGACTCATTGGAGAAAGTTAAACAGAGAAAACTCTCAGACTGTGGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641896.1
3UTR-3UTR TCA 90 bp TTCTCCAATGAGTCCATGCCTCATAGTCCACATTTCTTTCACGCAAAAGAAGAGGTTATAGCATCCTGTTaGACGGAGAAGGGAAAGAGG +
Preference number: 2 (lower is better)
Translates to: FSNESMPHSPHFFHAKEEVIASC*TEKGKR
Trigger: CCTCTTTCCCTTCTCCGTTCAACAGGATGCTATAAC...CTCTTCTTTTGCGTGAAAGAAATGTGGACTATGAGGCATGGACTCATTGGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641896.1
3UTR-3UTR GCA 90 bp CCCAGCAACCAAACATTGCTACTCCTCAAGAGACTGGTTTATCTTTGTGCTCTGAAAGTTCATGTCTTCTaGCTGAGCATCATCTGTGGA +
Preference number: 2 (lower is better)
Translates to: PSNQTLLLLKRLVYLCALKVHVF*LSIICG
Trigger: TCCACAGATGATGCTCAGGCAGAAGACATGAACTTT...CAGAGCACAAAGATAAACCAGTCTCTTGAGGAGTAGCAATGTTTGGTTGCTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641896.1
3UTR-3UTR GCA 90 bp TTCTCCAATGAGTCCATGCCTCATAGTCCACATTTCTTTCACGCAAAAGAAGAGACTGGTTTATCTTTGTaGTCTGGCCCCTGGGGATTT +
Preference number: 2 (lower is better)
Translates to: FSNESMPHSPHFFHAKEETGLSL*SGPWGF
Trigger: AAATCCCCAGGGGCCAGAGCACAAAGATAAACCAGT...CTCTTCTTTTGCGTGAAAGAAATGTGGACTATGAGGCATGGACTCATTGGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000641896.1
3UTR-3UTR TCA 90 bp TATCCTTACCCTTGGATACTGTCTCAAGCTACCTCTTTTTACCTCTTGTCAGGGCAGTTACCCACAGTCTaGGAGTTTTCTCTGTTTAAC +
Preference number: 2 (lower is better)
Translates to: YPYPWILSQATSFYLLSGQLPTV*EFSLFN
Trigger: GTTAAACAGAGAAAACTCTCAGACTGTGGGTAACTG...CCCTGACAAGAGGTAAAAAGAGGTAGCTTGAGACAGTATCCAAGGGTAAGGATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641896.1
3UTR-3UTR CCA 90 bp TTAGCGTTGCTGGAGATTTACATTGTCAGTCTTTGCAAAGAACAGGACACTCGGTTGCCTTCAATACTGTaGGGATATTCACATGCAGAC +
Preference number: 2 (lower is better)
Translates to: LALLEIYIVSLCKEQDTRLPSIL*GYSHAD
Trigger: GTCTGCATGTGAATATCCCCACAGTATTGAAGGCAA...CCGAGTGTCCTGTTCTTTGCAAAGACTGACAATGTAAATCTCCAGCAACGCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641896.1
3UTR-3UTR TCA 90 bp TACCCACAGTCTGAGAGTTTTCTCTGTTTAACTTTCTCCAATGAGTCCATGCCTTCTCTAAGGCATCTTTaGAATTGGCTGGATCTGAAC +
Preference number: 2 (lower is better)
Translates to: YPQSESFLCLTFSNESMPSLRHL*NWLDLN
Trigger: GTTCAGATCCAGCCAATTTCAAAGATGCCTTAGAGA...AGGCATGGACTCATTGGAGAAAGTTAAACAGAGAAAACTCTCAGACTGTGGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641896.1
3UTR-3UTR CCA 90 bp TTCTCCAATGAGTCCATGCCTCATAGTCCACATTTCTTTCACGCAAAAGAAGAGCCTGAGCATCATCTGTaGAAAGGAATAAAGTTGGCA +
Preference number: 2 (lower is better)
Translates to: FSNESMPHSPHFFHAKEEPEHHL*KGIKLA
Trigger: TGCCAACTTTATTCCTTTCCACAGATGATGCTCAGG...CTCTTCTTTTGCGTGAAAGAAATGTGGACTATGAGGCATGGACTCATTGGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641896.1
3UTR CAA 90 bp CATACTCCTAGACTGAAAACCCTACTCTATCGCTTGCTAGCCATTTaGCATCAGTCAAATTATGTAACTCTCCAAGCCTCAACTTCTTCA +
Preference number: 2 (lower is better)
Translates to: HTPRLKTLLYRLLAI*HQSNYVTLQASTSS
Trigger: TGAAGAAGTTGAGGCTTGGAGAGTTACATAATTTGACTGATGCAAAATGGCTAGCAAGCGATAGAGTAGGGTTTTCAGTCTAGGAGTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641896.1
3UTR CAA 90 bp CGTTTCTTCTCAATTAGCGTTGCTGGAGATTTACATTGTCAGTCTTaGCAAAGAACAGGACACTCGGTTTGGTTAGTTGTTTCTTTCTAC +
Preference number: 2 (lower is better)
Translates to: RFFSISVAGDLHCQS*QRTGHSVWLVVSFY
Trigger: GTAGAAAGAAACAACTAACCAAACCGAGTGTCCTGTTCTTTGCAAAGACTGACAATGTAAATCTCCAGCAACGCTAATTGAGAAGAAACG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641896.1
3UTR-3UTR GCA 90 bp GTTTCTTCTCAATTAGCGTTGCTGGAGATTTACATTGTCAGTCTTTGCAAAGAAAGAAATAGAGTTGCATaGTCTCAGTTCCCCAGATCC +
Preference number: 2 (lower is better)
Translates to: VSSQLALLEIYIVSLCKERNRVA*SQFPRS
Trigger: GGATCTGGGGAACTGAGAGCATGCAACTCTATTTCT...TTCTTTGCAAAGACTGACAATGTAAATCTCCAGCAACGCTAATTGAGAAGAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641896.1
3UTR-3UTR CCA 90 bp CTGAATATAAAGAAGTCAGCATTAACTACCATTCTATTCCTGTGTGATAGCTGTAGAATGTTCCTCCCCTaGCTGCCCTGTTTAAATTCA +
Preference number: 2 (lower is better)
Translates to: LNIKKSALTTILFLCDSCRMFLP*LPCLNS
Trigger: TGAATTTAAACAGGGCAGCCAGGGGAGGAACATTCT...ACAGCTATCACACAGGAATAGAATGGTAGTTAATGCTGACTTCTTTATATTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641896.1
3UTR-3UTR TCA 90 bp CTGAATATAAAGAAGTCAGCATTAACTACCATTCTATTCCTGTGTGATAGCTGTACGGTTTTCCCTGCCTaGTTCTATACTTCTAGATTG +
Preference number: 2 (lower is better)
Translates to: LNIKKSALTTILFLCDSCTVFPA*FYTSRL
Trigger: CAATCTAGAAGTATAGAATCAGGCAGGGAAAACCGT...ACAGCTATCACACAGGAATAGAATGGTAGTTAATGCTGACTTCTTTATATTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641896.1
3UTR-3UTR TCA 90 bp CTGAATATAAAGAAGTCAGCATTAACTACCATTCTATTCCTGTGTGATAGCTGTGATTCAGATACAAGTTaGTTGAATCCACTGAGAAAG +
Preference number: 2 (lower is better)
Translates to: LNIKKSALTTILFLCDSCDSDTS*LNPLRK
Trigger: CTTTCTCAGTGGATTCAATCAACTTGTATCTGAATC...ACAGCTATCACACAGGAATAGAATGGTAGTTAATGCTGACTTCTTTATATTCAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641896.1
3UTR-3UTR CCA 90 bp CTGAATATAAAGAAGTCAGCATTAACTACCATTCTATTCCTGTGTGATAGCTGTTTATCACCTAGCTTTTaGAGACATTGGTTAATCTTC +
Preference number: 2 (lower is better)
Translates to: LNIKKSALTTILFLCDSCLSPSF*RHWLIF
Trigger: GAAGATTAACCAATGTCTCCAAAAGCTAGGTGATAA...ACAGCTATCACACAGGAATAGAATGGTAGTTAATGCTGACTTCTTTATATTCAG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641896.1
3UTR GCA 72 bp TCATATCTCAAAGTCGAGTTCACATTTCCTCAGTTCTaGCTGGGGACTCGGGCCAGGTTTCACTGGTTAGAT +
Preference number: 3 (lower is better)
Translates to: SYLKVEFTFPQF*LGTRARFHWLD
Trigger: ATCTAACCAGTGAAACCTGGCCCGAGTCCCCAGGCAGAACTGAGGAAATGTGAACTCGACTTTGAGATATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641896.1
3UTR-3UTR CAA 90 bp TATCCTTACCCTTGGATACTGTCTCAAGCTACCTCTTTTTACCTCTTGTCAGGGCCCAGCAACCAAACATaGCTACTCCTCAAGAGACTG +
Preference number: 3 (lower is better)
Translates to: YPYPWILSQATSFYLLSGPSNQT*LLLKRL
Trigger: CAGTCTCTTGAGGAGTAGCAATGTTTGGTTGCTGGG...CCCTGACAAGAGGTAAAAAGAGGTAGCTTGAGACAGTATCCAAGGGTAAGGATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641896.1
3UTR-3UTR CAA 90 bp GTTTCTTCTCAATTAGCGTTGCTGGAGATTTACATTGTCAGTCTTTGCAAAGAAGAGACTGGTTTATCTTaGTGCTCTGGCCCCTGGGGA +
Preference number: 3 (lower is better)
Translates to: VSSQLALLEIYIVSLCKEETGLS*CSGPWG
Trigger: TCCCCAGGGGCCAGAGCACAAAGATAAACCAGTCTC...TTCTTTGCAAAGACTGACAATGTAAATCTCCAGCAACGCTAATTGAGAAGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641896.1
3UTR-3UTR CAA 90 bp TACCCACAGTCTGAGAGTTTTCTCTGTTTAACTTTCTCCAATGAGTCCATGCCTTGTTATAGCATCCTGTaGAACGGAGAAGGGAAAGAG +
Preference number: 3 (lower is better)
Translates to: YPQSESFLCLTFSNESMPCYSIL*NGEGKE
Trigger: CTCTTTCCCTTCTCCGTTCAACAGGATGCTATAACA...AGGCATGGACTCATTGGAGAAAGTTAAACAGAGAAAACTCTCAGACTGTGGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641896.1
3UTR-3UTR CAA 90 bp TTAGCGTTGCTGGAGATTTACATTGTCAGTCTTTGCAAAGAACAGGACACTCGGAAGGCATCTTTGAAATaGGCTGGATCTGAACAGATA +
Preference number: 3 (lower is better)
Translates to: LALLEIYIVSLCKEQDTRKASLK*AGSEQI
Trigger: TATCTGTTCAGATCCAGCCAATTTCAAAGATGCCTT...CCGAGTGTCCTGTTCTTTGCAAAGACTGACAATGTAAATCTCCAGCAACGCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641896.1
3UTR CCA 72 bp GACTTTCATCGTGAGAAGTTACCATATCCTTACCCTTaGATACTGTCTCAAGCTACCTCTTTTTACCTCTTG +
Preference number: 3 (lower is better)
Translates to: DFHREKLPYPYP*ILSQATSFYLL
Trigger: CAAGAGGTAAAAAGAGGTAGCTTGAGACAGTATCCAAGGGTAAGGATATGGTAACTTCTCACGATGAAAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641896.1
3UTR-3UTR CAA 90 bp TACCCACAGTCTGAGAGTTTTCTCTGTTTAACTTTCTCCAATGAGTCCATGCCTATCTCTAAGGCATCTTaGAAATTGGCTGGATCTGAA +
Preference number: 3 (lower is better)
Translates to: YPQSESFLCLTFSNESMPISKAS*KLAGSE
Trigger: TTCAGATCCAGCCAATTTCAAAGATGCCTTAGAGAT...AGGCATGGACTCATTGGAGAAAGTTAAACAGAGAAAACTCTCAGACTGTGGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641896.1
3UTR-3UTR CAA 90 bp CTGAATATAAAGAAGTCAGCATTAACTACCATTCTATTCCTGTGTGATAGCTGTTCCTGGGACATACATTaGCTCCTTCAGTTCACCTCC +
Preference number: 3 (lower is better)
Translates to: LNIKKSALTTILFLCDSCSWDIH*LLQFTS
Trigger: GGAGGTGAACTGAAGGAGCAAATGTATGTCCCAGGA...ACAGCTATCACACAGGAATAGAATGGTAGTTAATGCTGACTTCTTTATATTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641896.1
3UTR-3UTR CAA 90 bp TACCCACAGTCTGAGAGTTTTCTCTGTTTAACTTTCTCCAATGAGTCCATGCCTAATGGTGAGCGGTCTTaGTTGTCTTTCATTTTAAGA +
Preference number: 3 (lower is better)
Translates to: YPQSESFLCLTFSNESMPNGERS*LSFILR
Trigger: TCTTAAAATGAAAGACAACAAAGACCGCTCACCATT...AGGCATGGACTCATTGGAGAAAGTTAAACAGAGAAAACTCTCAGACTGTGGGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641896.1
3UTR-3UTR CAA 90 bp CTGAATATAAAGAAGTCAGCATTAACTACCATTCTATTCCTGTGTGATAGCTGTGCAGCTCATCCTGCATaGCCTGAAGAATTTCTCTTG +
Preference number: 3 (lower is better)
Translates to: LNIKKSALTTILFLCDSCAAHPA*PEEFLL
Trigger: CAAGAGAAATTCTTCAGGCAATGCAGGATGAGCTGC...ACAGCTATCACACAGGAATAGAATGGTAGTTAATGCTGACTTCTTTATATTCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641896.1
3UTR-3UTR CAA 90 bp CTGAATATAAAGAAGTCAGCATTAACTACCATTCTATTCCTGTGTGATAGCTGTACCCTACTCTATCGCTaGCTAGCCATTTTGCATCAG +
Preference number: 3 (lower is better)
Translates to: LNIKKSALTTILFLCDSCTLLYR*LAILHQ
Trigger: CTGATGCAAAATGGCTAGCAAGCGATAGAGTAGGGT...ACAGCTATCACACAGGAATAGAATGGTAGTTAATGCTGACTTCTTTATATTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641896.1
3UTR CCA 72 bp TGCATACTTTTGTGTACCCTACTCAAAATATGTTATTaGTCCCACATCATCAAAGGGCAGGATAGCAAAGTG +
Preference number: 3 (lower is better)
Translates to: CILLCTLLKICY*SHIIKGQDSKV
Trigger: CACTTTGCTATCCTGCCCTTTGATGATGTGGGACCAATAACATATTTTGAGTAGGGTACACAAAAGTATGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641896.1
3UTR TCA 72 bp TCTCTACCAAAACTTGTCTCTGATTCAGATACAAGTTaGTTGAATCCACTGAGAAAGCCCTCAGAAAATCAG +
Preference number: 3 (lower is better)
Translates to: SLPKLVSDSDTS*LNPLRKPSENQ
Trigger: CTGATTTTCTGAGGGCTTTCTCAGTGGATTCAATCAACTTGTATCTGAATCAGAGACAAGTTTTGGTAGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641896.1
3UTR TCA 72 bp GAAGTAGCTGCCATCATCACATCAACATCTTATAGATaGAAGCTGAGGCTCATAAAAGTCACAAAGCAAGTA +
Preference number: 3 (lower is better)
Translates to: EVAAIITSTSYR*KLRLIKVTKQV
Trigger: TACTTGCTTTGTGACTTTTATGAGCCTCAGCTTTCATCTATAAGATGTTGATGTGATGATGGCAGCTACTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641896.1
3UTR-3UTR CAA 90 bp CTGAATATAAAGAAGTCAGCATTAACTACCATTCTATTCCTGTGTGATAGCTGTTGGCTAAGATTAACGTaGATCTCCATCAAGCATCTG +
Preference number: 3 (lower is better)
Translates to: LNIKKSALTTILFLCDSCWLRLT*ISIKHL
Trigger: CAGATGCTTGATGGAGATCAACGTTAATCTTAGCCA...ACAGCTATCACACAGGAATAGAATGGTAGTTAATGCTGACTTCTTTATATTCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641896.1
CDS-3UTR TCA 90 bp TTCTGGGGTGATCTGGCCTTCAGACTCCATCAGCCCAACACTAATGCCCAAGTCCCCATGAGTTGCCACTaGAGATGTCTCACCCAGTGG +
Preference number: 4 (lower is better)
Translates to: FWGDLAFRLHQPNTNAQVPMSCH*RCLTQW
Trigger: CCACTGGGTGAGACATCTTCAGTGGCAACTCATGGG...GACTTGGGCATTAGTGTTGGGCTGATGGAGTCTGAAGGCCAGATCACCCCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641896.1
CDS-3UTR TCA 90 bp TTCTGGGGTGATCTGGCCTTCAGACTCCATCAGCCCAACACTAATGCCCAAGTCCTTTCCCTGATGGGTTaGTGCCTGGTAGTCTACATT +
Preference number: 4 (lower is better)
Translates to: FWGDLAFRLHQPNTNAQVLSLMG*CLVVYI
Trigger: AATGTAGACTACCAGGCATCAACCCATCAGGGAAAG...GACTTGGGCATTAGTGTTGGGCTGATGGAGTCTGAAGGCCAGATCACCCCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641896.1
CDS-3UTR GCA 90 bp TTCTGGGGTGATCTGGCCTTCAGACTCCATCAGCCCAACACTAATGCCCAAGTCTTTCAGCCCTGCACCTaGCTTTGCCTTCAATACTGT +
Preference number: 4 (lower is better)
Translates to: FWGDLAFRLHQPNTNAQVFQPCT*LCLQYC
Trigger: ACAGTATTGAAGGCAAAGGCAGGTGCAGGGCTGAAA...GACTTGGGCATTAGTGTTGGGCTGATGGAGTCTGAAGGCCAGATCACCCCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641896.1
CDS-3UTR GCA 90 bp TTCTGGGGTGATCTGGCCTTCAGACTCCATCAGCCCAACACTAATGCCCAAGTCCCTGGGACATACATTTaGTCCTTCAGTTCACCTCCT +
Preference number: 4 (lower is better)
Translates to: FWGDLAFRLHQPNTNAQVPGTYI*SFSSPP
Trigger: AGGAGGTGAACTGAAGGAGCAAATGTATGTCCCAGG...GACTTGGGCATTAGTGTTGGGCTGATGGAGTCTGAAGGCCAGATCACCCCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641896.1
CDS-3UTR GCA 90 bp TATCCTTACCCTTGGATACTGTCTCAAGCTACCTCTTTTTACCTCTTGTCAGGGACATTTCCTCAGTTCTaGCTGGGGACTCGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: YPYPWILSQATSFYLLSGTFPQF*LGTRAR
Trigger: CCTGGCCCGAGTCCCCAGGCAGAACTGAGGAAATGT...CCCTGACAAGAGGTAAAAAGAGGTAGCTTGAGACAGTATCCAAGGGTAAGGATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641896.1
CDS-3UTR GCA 90 bp TATCCTTACCCTTGGATACTGTCTCAAGCTACCTCTTTTTACCTCTTGTCAGGGAGCAGGACTTGGGTGTaGAAGGGCACTACATCCTGC +
Preference number: 4 (lower is better)
Translates to: YPYPWILSQATSFYLLSGSRTWV*KGTTSC
Trigger: GCAGGATGTAGTGCCCTTGCACACCCAAGTCCTGCT...CCCTGACAAGAGGTAAAAAGAGGTAGCTTGAGACAGTATCCAAGGGTAAGGATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641896.1
CDS-3UTR GCA 90 bp TTCTGGGGTGATCTGGCCTTCAGACTCCATCAGCCCAACACTAATGCCCAAGTCCAGCTCATCCTGCATTaGCTGAAGAATTTCTCTTGT +
Preference number: 4 (lower is better)
Translates to: FWGDLAFRLHQPNTNAQVQLILH*LKNFSC
Trigger: ACAAGAGAAATTCTTCAGGCAATGCAGGATGAGCTG...GACTTGGGCATTAGTGTTGGGCTGATGGAGTCTGAAGGCCAGATCACCCCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641896.1
CDS-3UTR CCA 90 bp TTCTGGGGTGATCTGGCCTTCAGACTCCATCAGCCCAACACTAATGCCCAAGTCGACACCAGTGCCCTCTaGTTGTTAATGTTTACTGTT +
Preference number: 4 (lower is better)
Translates to: FWGDLAFRLHQPNTNAQVDTSAL*LLMFTV
Trigger: AACAGTAAACATTAACAACCAGAGGGCACTGGTGTC...GACTTGGGCATTAGTGTTGGGCTGATGGAGTCTGAAGGCCAGATCACCCCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641896.1
3UTR CAA 72 bp CCCACCTTCCTTTGGCCTCTACCCAGCAACCAAACATaGCTACTCCTCAAGAGACTGGTTTATCTTTGTGCT +
Preference number: 4 (lower is better)
Translates to: PTFLWPLPSNQT*LLLKRLVYLCA
Trigger: AGCACAAAGATAAACCAGTCTCTTGAGGAGTAGCAATGTTTGGTTGCTGGGTAGAGGCCAAAGGAAGGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641896.1
CDS-3UTR TCA 90 bp TATCCTTACCCTTGGATACTGTCTCAAGCTACCTCTTTTTACCTCTTGTCAGGGCATTTTAAGAGTTGGTaGGGCAGGAGCAGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: YPYPWILSQATSFYLLSGHFKSW*GRSRKR
Trigger: CCTCTTCCTGCTCCTGCCTCACCAACTCTTAAAATG...CCCTGACAAGAGGTAAAAAGAGGTAGCTTGAGACAGTATCCAAGGGTAAGGATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641896.1
CDS-3UTR TCA 90 bp CCCAGCAACCAAACATTGCTACTCCTCAAGAGACTGGTTTATCTTTGTGCTCTGTTCATGTCTTCTGCCTaGGCATCATCTGTGGAAAGG +
Preference number: 4 (lower is better)
Translates to: PSNQTLLLLKRLVYLCALFMSSA*ASSVER
Trigger: CCTTTCCACAGATGATGCTCAGGCAGAAGACATGAA...CAGAGCACAAAGATAAACCAGTCTCTTGAGGAGTAGCAATGTTTGGTTGCTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641896.1
CDS-3UTR TCA 90 bp CCCAGCAACCAAACATTGCTACTCCTCAAGAGACTGGTTTATCTTTGTGCTCTGGATAGGGCATGCACCTaGGCACAAAAGTATGAGAAG +
Preference number: 4 (lower is better)
Translates to: PSNQTLLLLKRLVYLCALDRACT*AQKYEK
Trigger: CTTCTCATACTTTTGTGCTCAGGTGCATGCCCTATC...CAGAGCACAAAGATAAACCAGTCTCTTGAGGAGTAGCAATGTTTGGTTGCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641896.1
CDS-3UTR TCA 90 bp CCCAGCAACCAAACATTGCTACTCCTCAAGAGACTGGTTTATCTTTGTGCTCTGGTTATAGCATCCTGTTaGACGGAGAAGGGAAAGAGG +
Preference number: 4 (lower is better)
Translates to: PSNQTLLLLKRLVYLCALVIASC*TEKGKR
Trigger: CCTCTTTCCCTTCTCCGTTCAACAGGATGCTATAAC...CAGAGCACAAAGATAAACCAGTCTCTTGAGGAGTAGCAATGTTTGGTTGCTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641896.1
CDS-3UTR GCA 90 bp CCCAGCAACCAAACATTGCTACTCCTCAAGAGACTGGTTTATCTTTGTGCTCTGCCAGCAACCAAACATTaGTACTCCTCAAGAGACTGG +
Preference number: 4 (lower is better)
Translates to: PSNQTLLLLKRLVYLCALPATKH*YSSRDW
Trigger: CCAGTCTCTTGAGGAGTAGCAATGTTTGGTTGCTGG...CAGAGCACAAAGATAAACCAGTCTCTTGAGGAGTAGCAATGTTTGGTTGCTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641896.1
CDS-3UTR GCA 90 bp TACCCACAGTCTGAGAGTTTTCTCTGTTTAACTTTCTCCAATGAGTCCATGCCTCCCTGCACCTGCCTTTaGCTTCAATACTGTGGGGAT +
Preference number: 4 (lower is better)
Translates to: YPQSESFLCLTFSNESMPPCTCL*LQYCGD
Trigger: ATCCCCACAGTATTGAAGGCAAAGGCAGGTGCAGGG...AGGCATGGACTCATTGGAGAAAGTTAAACAGAGAAAACTCTCAGACTGTGGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641896.1
CDS-3UTR CCA 90 bp CCCAGCAACCAAACATTGCTACTCCTCAAGAGACTGGTTTATCTTTGTGCTCTGTTTATCTTTGTGCTCTaGCCCCTGGGGATTTCCAGA +
Preference number: 4 (lower is better)
Translates to: PSNQTLLLLKRLVYLCALFIFVL*PLGISR
Trigger: TCTGGAAATCCCCAGGGGCCAGAGCACAAAGATAAA...CAGAGCACAAAGATAAACCAGTCTCTTGAGGAGTAGCAATGTTTGGTTGCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641896.1
CDS-3UTR CCA 90 bp TATCCTTACCCTTGGATACTGTCTCAAGCTACCTCTTTTTACCTCTTGTCAGGGTATTCTGGGGTGATCTaGCCTTCAGACTCCATCAGC +
Preference number: 4 (lower is better)
Translates to: YPYPWILSQATSFYLLSGYSGVI*PSDSIS
Trigger: GCTGATGGAGTCTGAAGGCCAGATCACCCCAGAATA...CCCTGACAAGAGGTAAAAAGAGGTAGCTTGAGACAGTATCCAAGGGTAAGGATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641896.1
CDS-3UTR TCA 90 bp TTCTCCAATGAGTCCATGCCTCATAGTCCACATTTCTTTCACGCAAAAGAAGAGTGGAATTCTGTGCCTTaGTCCCATCTGCTGTGGTAC +
Preference number: 4 (lower is better)
Translates to: FSNESMPHSPHFFHAKEEWNSVP*SHLLWY
Trigger: GTACCACAGCAGATGGGATCAAGGCACAGAATTCCA...CTCTTCTTTTGCGTGAAAGAAATGTGGACTATGAGGCATGGACTCATTGGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641896.1
CDS-3UTR GCA 90 bp TATCCTTACCCTTGGATACTGTCTCAAGCTACCTCTTTTTACCTCTTGTCAGGGACTGTCTCTCCACCATaGCAATATCATACCTACCCC +
Preference number: 4 (lower is better)
Translates to: YPYPWILSQATSFYLLSGTVSPP*QYHTYP
Trigger: GGGGTAGGTATGATATTGGCATGGTGGAGAGACAGT...CCCTGACAAGAGGTAAAAAGAGGTAGCTTGAGACAGTATCCAAGGGTAAGGATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641896.1
CDS-3UTR GCA 90 bp CTAAGTGGACACATAGCTGTTCATGAAGAGAATGGTGAGCGGTCTTTGTTGTCTGTGGGGATATTCACATaGAGACCTGGAGAGCCAATT +
Preference number: 4 (lower is better)
Translates to: LSGHIAVHEENGERSLLSVGIFT*RPGEPI
Trigger: AATTGGCTCTCCAGGTCTGCATGTGAATATCCCCAC...AGACAACAAAGACCGCTCACCATTCTCTTCATGAACAGCTATGTGTCCACTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641896.1
CDS-3UTR CCA 90 bp CCCAGCAACCAAACATTGCTACTCCTCAAGAGACTGGTTTATCTTTGTGCTCTGCACCATCCAACTCAGTaGAGTTATGGCTATGATAGC +
Preference number: 4 (lower is better)
Translates to: PSNQTLLLLKRLVYLCALHHPTQ*SYGYDS
Trigger: GCTATCATAGCCATAACTCCACTGAGTTGGATGGTG...CAGAGCACAAAGATAAACCAGTCTCTTGAGGAGTAGCAATGTTTGGTTGCTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641896.1
CDS-3UTR TCA 90 bp CTAAGTGGACACATAGCTGTTCATGAAGAGAATGGTGAGCGGTCTTTGTTGTCTCAGATGCTTACTGGCTaGAGAGTCTGTTTCTTCAAG +
Preference number: 4 (lower is better)
Translates to: LSGHIAVHEENGERSLLSQMLTG*RVCFFK
Trigger: CTTGAAGAAACAGACTCTTCAGCCAGTAAGCATCTG...AGACAACAAAGACCGCTCACCATTCTCTTCATGAACAGCTATGTGTCCACTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641896.1
CDS-3UTR TCA 90 bp TATCCTTACCCTTGGATACTGTCTCAAGCTACCTCTTTTTACCTCTTGTCAGGGTGTGTAGCTACTGGGTaGGACATCTTCAGTGATAGA +
Preference number: 4 (lower is better)
Translates to: YPYPWILSQATSFYLLSGCVATG*DIFSDR
Trigger: TCTATCACTGAAGATGTCTCACCCAGTAGCTACACA...CCCTGACAAGAGGTAAAAAGAGGTAGCTTGAGACAGTATCCAAGGGTAAGGATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641896.1
CDS-3UTR TCA 90 bp CCCAGCAACCAAACATTGCTACTCCTCAAGAGACTGGTTTATCTTTGTGCTCTGACGGTTTTCCCTGCCTaGTTCTATACTTCTAGATTG +
Preference number: 4 (lower is better)
Translates to: PSNQTLLLLKRLVYLCALTVFPA*FYTSRL
Trigger: CAATCTAGAAGTATAGAATCAGGCAGGGAAAACCGT...CAGAGCACAAAGATAAACCAGTCTCTTGAGGAGTAGCAATGTTTGGTTGCTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641896.1
CDS-3UTR TCA 90 bp TTCTCCAATGAGTCCATGCCTCATAGTCCACATTTCTTTCACGCAAAAGAAGAGATTTTCCCTGCCATCTaGGAAGACTCCTTACAAGGG +
Preference number: 4 (lower is better)
Translates to: FSNESMPHSPHFFHAKEEIFPAI*EDSLQG
Trigger: CCCTTGTAAGGAGTCTTCTCAGATGGCAGGGAAAAT...CTCTTCTTTTGCGTGAAAGAAATGTGGACTATGAGGCATGGACTCATTGGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641896.1
CDS-3UTR GCA 90 bp TTAGCGTTGCTGGAGATTTACATTGTCAGTCTTTGCAAAGAACAGGACACTCGGAGAAATAGAGTTGCATaGTCTCAGTTCCCCAGATCC +
Preference number: 4 (lower is better)
Translates to: LALLEIYIVSLCKEQDTRRNRVA*SQFPRS
Trigger: GGATCTGGGGAACTGAGAGCATGCAACTCTATTTCT...CCGAGTGTCCTGTTCTTTGCAAAGACTGACAATGTAAATCTCCAGCAACGCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641896.1
CDS-3UTR GCA 90 bp TTCTCCAATGAGTCCATGCCTCATAGTCCACATTTCTTTCACGCAAAAGAAGAGCTCTTCAGCCAAACATaGACCCAATCAGCCCTACTA +
Preference number: 4 (lower is better)
Translates to: FSNESMPHSPHFFHAKEELFSQT*TQSALL
Trigger: TAGTAGGGCTGATTGGGTGCATGTTTGGCTGAAGAG...CTCTTCTTTTGCGTGAAAGAAATGTGGACTATGAGGCATGGACTCATTGGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641896.1
CDS-3UTR TCA 90 bp CTAAGTGGACACATAGCTGTTCATGAAGAGAATGGTGAGCGGTCTTTGTTGTCTTCTCTAAGGCATCTTTaGAATTGGCTGGATCTGAAC +
Preference number: 4 (lower is better)
Translates to: LSGHIAVHEENGERSLLSSLRHL*NWLDLN
Trigger: GTTCAGATCCAGCCAATTTCAAAGATGCCTTAGAGA...AGACAACAAAGACCGCTCACCATTCTCTTCATGAACAGCTATGTGTCCACTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641896.1
CDS-3UTR GCA 90 bp TTAGCGTTGCTGGAGATTTACATTGTCAGTCTTTGCAAAGAACAGGACACTCGGAAAGTTCATGTCTTCTaGCTGAGCATCATCTGTGGA +
Preference number: 4 (lower is better)
Translates to: LALLEIYIVSLCKEQDTRKVHVF*LSIICG
Trigger: TCCACAGATGATGCTCAGGCAGAAGACATGAACTTT...CCGAGTGTCCTGTTCTTTGCAAAGACTGACAATGTAAATCTCCAGCAACGCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641896.1
CDS-3UTR GCA 90 bp CTAAGTGGACACATAGCTGTTCATGAAGAGAATGGTGAGCGGTCTTTGTTGTCTAGATACAGACACCAGTaGCCTCTGGTTGTTAATGTT +
Preference number: 4 (lower is better)
Translates to: LSGHIAVHEENGERSLLSRYRHQ*PLVVNV
Trigger: AACATTAACAACCAGAGGGCACTGGTGTCTGTATCT...AGACAACAAAGACCGCTCACCATTCTCTTCATGAACAGCTATGTGTCCACTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641896.1
CDS-3UTR GCA 90 bp TACCCACAGTCTGAGAGTTTTCTCTGTTTAACTTTCTCCAATGAGTCCATGCCTTGCCTTGATCCCATCTaGTGTGGTACACATTTTCTC +
Preference number: 4 (lower is better)
Translates to: YPQSESFLCLTFSNESMPCLDPI*CGTHFL
Trigger: GAGAAAATGTGTACCACAGCAGATGGGATCAAGGCA...AGGCATGGACTCATTGGAGAAAGTTAAACAGAGAAAACTCTCAGACTGTGGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641896.1
CDS-3UTR GCA 90 bp GGCCTCTACCCAGCAACCAAACATTGCTACTCCTCAAGAGACTGGTTTATCTTTATTAATGGAATTCTGTaGCTTGATCCCATCTGCTGT +
Preference number: 4 (lower is better)
Translates to: GLYPATKHCYSSRDWFIFINGIL*LDPICC
Trigger: ACAGCAGATGGGATCAAGGCACAGAATTCCATTAAT...AAAGATAAACCAGTCTCTTGAGGAGTAGCAATGTTTGGTTGCTGGGTAGAGGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641896.1
CDS-3UTR GCA 90 bp CCCAGCAACCAAACATTGCTACTCCTCAAGAGACTGGTTTATCTTTGTGCTCTGAGAGCGTACAAATCCTaGATACTTTTGTGTACCCTA +
Preference number: 4 (lower is better)
Translates to: PSNQTLLLLKRLVYLCALRAYKS*ILLCTL
Trigger: TAGGGTACACAAAAGTATGCAGGATTTGTACGCTCT...CAGAGCACAAAGATAAACCAGTCTCTTGAGGAGTAGCAATGTTTGGTTGCTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641896.1
CDS-3UTR CCA 90 bp CTAAGTGGACACATAGCTGTTCATGAAGAGAATGGTGAGCGGTCTTTGTTGTCTTTGCCTTCAATACTGTaGGGATATTCACATGCAGAC +
Preference number: 4 (lower is better)
Translates to: LSGHIAVHEENGERSLLSLPSIL*GYSHAD
Trigger: GTCTGCATGTGAATATCCCCACAGTATTGAAGGCAA...AGACAACAAAGACCGCTCACCATTCTCTTCATGAACAGCTATGTGTCCACTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641896.1
CDS-3UTR CCA 90 bp TTCTCCAATGAGTCCATGCCTCATAGTCCACATTTCTTTCACGCAAAAGAAGAGCCATATCCTTACCCTTaGATACTGTCTCAAGCTACC +
Preference number: 4 (lower is better)
Translates to: FSNESMPHSPHFFHAKEEPYPYP*ILSQAT
Trigger: GGTAGCTTGAGACAGTATCCAAGGGTAAGGATATGG...CTCTTCTTTTGCGTGAAAGAAATGTGGACTATGAGGCATGGACTCATTGGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641896.1
CDS-3UTR CCA 90 bp TACCCACAGTCTGAGAGTTTTCTCTGTTTAACTTTCTCCAATGAGTCCATGCCTTCTTTCCTTAGGACGTaGGCATATGCCTTTGTCTCA +
Preference number: 4 (lower is better)
Translates to: YPQSESFLCLTFSNESMPSFLRT*AYAFVS
Trigger: TGAGACAAAGGCATATGCCCACGTCCTAAGGAAAGA...AGGCATGGACTCATTGGAGAAAGTTAAACAGAGAAAACTCTCAGACTGTGGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641896.1
3UTR CAA 72 bp CACATAGCTGTTCATGAAGAGAATGGTGAGCGGTCTTaGTTGTCTTTCATTTTAAGAGTTGGTGAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: HIAVHEENGERS*LSFILRVGEAG
Trigger: TCCTGCCTCACCAACTCTTAAAATGAAAGACAACAAAGACCGCTCACCATTCTCTTCATGAACAGCTATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641896.1
CDS-3UTR TCA 90 bp CTAAGTGGACACATAGCTGTTCATGAAGAGAATGGTGAGCGGTCTTTGTTGTCTTCACGCAATCTTAAATaGAAGGTGCTCATTTGCCAA +
Preference number: 4 (lower is better)
Translates to: LSGHIAVHEENGERSLLSSRNLK*KVLICQ
Trigger: TTGGCAAATGAGCACCTTTCATTTAAGATTGCGTGA...AGACAACAAAGACCGCTCACCATTCTCTTCATGAACAGCTATGTGTCCACTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641896.1
CDS-3UTR GCA 90 bp TACCCACAGTCTGAGAGTTTTCTCTGTTTAACTTTCTCCAATGAGTCCATGCCTCCATCAAGCATCTGTTaGCAGTCCAGTAACTCTTTT +
Preference number: 4 (lower is better)
Translates to: YPQSESFLCLTFSNESMPPSSIC*QSSNSF
Trigger: AAAAGAGTTACTGGACTGGCAACAGATGCTTGATGG...AGGCATGGACTCATTGGAGAAAGTTAAACAGAGAAAACTCTCAGACTGTGGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641896.1
CDS-3UTR CCA 90 bp GTTTCTTCTCAATTAGCGTTGCTGGAGATTTACATTGTCAGTCTTTGCAAAGAACCAAAGACTTCTCATTaGGGCCCTCTTTTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: VSSQLALLEIYIVSLCKEPKTSH*GPLFPL
Trigger: CAGAGGGAAAAGAGGGCCCCAATGAGAAGTCTTTGG...TTCTTTGCAAAGACTGACAATGTAAATCTCCAGCAACGCTAATTGAGAAGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641896.1
CDS-3UTR CCA 90 bp GGCCTCTACCCAGCAACCAAACATTGCTACTCCTCAAGAGACTGGTTTATCTTTATTCACATGCAGACCTaGAGAGCCAATTACTTAAAA +
Preference number: 4 (lower is better)
Translates to: GLYPATKHCYSSRDWFIFIHMQT*RANYLK
Trigger: TTTTAAGTAATTGGCTCTCCAGGTCTGCATGTGAAT...AAAGATAAACCAGTCTCTTGAGGAGTAGCAATGTTTGGTTGCTGGGTAGAGGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641896.1
CDS-3UTR CCA 90 bp CTAAGTGGACACATAGCTGTTCATGAAGAGAATGGTGAGCGGTCTTTGTTGTCTACAGGACACTCGGTTTaGTTAGTTGTTTCTTTCTAC +
Preference number: 4 (lower is better)
Translates to: LSGHIAVHEENGERSLLSTGHSV*LVVSFY
Trigger: GTAGAAAGAAACAACTAACCAAACCGAGTGTCCTGT...AGACAACAAAGACCGCTCACCATTCTCTTCATGAACAGCTATGTGTCCACTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641896.1
CDS-3UTR CCA 90 bp GGCCTCTACCCAGCAACCAAACATTGCTACTCCTCAAGAGACTGGTTTATCTTTCTCAAAATATGTTATTaGTCCCACATCATCAAAGGG +
Preference number: 4 (lower is better)
Translates to: GLYPATKHCYSSRDWFIFLKICY*SHIIKG
Trigger: CCCTTTGATGATGTGGGACCAATAACATATTTTGAG...AAAGATAAACCAGTCTCTTGAGGAGTAGCAATGTTTGGTTGCTGGGTAGAGGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641896.1
3UTR CAA 72 bp AGACTGAAAACCCTACTCTATCGCTTGCTAGCCATTTaGCATCAGTCAAATTATGTAACTCTCCAAGCCTCA +
Preference number: 4 (lower is better)
Translates to: RLKTLLYRLLAI*HQSNYVTLQAS
Trigger: TGAGGCTTGGAGAGTTACATAATTTGACTGATGCAAAATGGCTAGCAAGCGATAGAGTAGGGTTTTCAGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641896.1
CDS-3UTR TCA 90 bp TTAGCGTTGCTGGAGATTTACATTGTCAGTCTTTGCAAAGAACAGGACACTCGGCAACTGCCTGCTCCCTaGTTTTTCATTAACTTTTTA +
Preference number: 4 (lower is better)
Translates to: LALLEIYIVSLCKEQDTRQLPAP*FFINFL
Trigger: TAAAAAGTTAATGAAAAATCAGGGAGCAGGCAGTTG...CCGAGTGTCCTGTTCTTTGCAAAGACTGACAATGTAAATCTCCAGCAACGCTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000641896.1
CDS-3UTR GCA 90 bp CTGAATATAAAGAAGTCAGCATTAACTACCATTCTATTCCTGTGTGATAGCTGTGCCTCAAGACCAGCCTaGTTTAACTATCGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: LNIKKSALTTILFLCDSCASRPA*FNYRFL
Trigger: CAGGAAGCGATAGTTAAAGCAGGCTGGTCTTGAGGC...ACAGCTATCACACAGGAATAGAATGGTAGTTAATGCTGACTTCTTTATATTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641896.1
CDS-3UTR CCA 90 bp GGCCTCTACCCAGCAACCAAACATTGCTACTCCTCAAGAGACTGGTTTATCTTTTTATCACCTAGCTTTTaGAGACATTGGTTAATCTTC +
Preference number: 4 (lower is better)
Translates to: GLYPATKHCYSSRDWFIFLSPSF*RHWLIF
Trigger: GAAGATTAACCAATGTCTCCAAAAGCTAGGTGATAA...AAAGATAAACCAGTCTCTTGAGGAGTAGCAATGTTTGGTTGCTGGGTAGAGGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641896.1
CDS-3UTR TCA 90 bp TTCTCCAATGAGTCCATGCCTCATAGTCCACATTTCTTTCACGCAAAAGAAGAGCAAGTTTTGGAGACATaGTTACAGACTGTGATCTAT +
Preference number: 4 (lower is better)
Translates to: FSNESMPHSPHFFHAKEEQVLET*LQTVIY
Trigger: ATAGATCACAGTCTGTAATCATGTCTCCAAAACTTG...CTCTTCTTTTGCGTGAAAGAAATGTGGACTATGAGGCATGGACTCATTGGAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641896.1
CDS-3UTR TCA 90 bp TTCTCCAATGAGTCCATGCCTCATAGTCCACATTTCTTTCACGCAAAAGAAGAGAAAGGACTTTCATCGTaGGAAGTTACCATATCCTTA +
Preference number: 4 (lower is better)
Translates to: FSNESMPHSPHFFHAKEEKGLSS*EVTISL
Trigger: TAAGGATATGGTAACTTCTCACGATGAAAGTCCTTT...CTCTTCTTTTGCGTGAAAGAAATGTGGACTATGAGGCATGGACTCATTGGAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641896.1
CDS-3UTR GCA 90 bp CTGAATATAAAGAAGTCAGCATTAACTACCATTCTATTCCTGTGTGATAGCTGTACTGGTTTATCTTTGTaGTCTGGCCCCTGGGGATTT +
Preference number: 4 (lower is better)
Translates to: LNIKKSALTTILFLCDSCTGLSL*SGPWGF
Trigger: AAATCCCCAGGGGCCAGAGCACAAAGATAAACCAGT...ACAGCTATCACACAGGAATAGAATGGTAGTTAATGCTGACTTCTTTATATTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641896.1
CDS-3UTR CCA 90 bp GTTTCTTCTCAATTAGCGTTGCTGGAGATTTACATTGTCAGTCTTTGCAAAGAAGGCAGGATAGCAAAGTaGCAAAAAGCATCGGTTCTA +
Preference number: 4 (lower is better)
Translates to: VSSQLALLEIYIVSLCKEGRIAK*QKASVL
Trigger: TAGAACCGATGCTTTTTGCCACTTTGCTATCCTGCC...TTCTTTGCAAAGACTGACAATGTAAATCTCCAGCAACGCTAATTGAGAAGAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641896.1
CDS-3UTR CCA 90 bp TATCCTTACCCTTGGATACTGTCTCAAGCTACCTCTTTTTACCTCTTGTCAGGGTCTCTAAATTTACCCTaGATCCTATTCACTTTGGTT +
Preference number: 4 (lower is better)
Translates to: YPYPWILSQATSFYLLSGSLNLP*ILFTLV
Trigger: AACCAAAGTGAATAGGATCCAGGGTAAATTTAGAGA...CCCTGACAAGAGGTAAAAAGAGGTAGCTTGAGACAGTATCCAAGGGTAAGGATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641896.1
3UTR CAA 72 bp TCAATTAGCGTTGCTGGAGATTTACATTGTCAGTCTTaGCAAAGAACAGGACACTCGGTTTGGTTAGTTGTT +
Preference number: 4 (lower is better)
Translates to: SISVAGDLHCQS*QRTGHSVWLVV
Trigger: AACAACTAACCAAACCGAGTGTCCTGTTCTTTGCAAAGACTGACAATGTAAATCTCCAGCAACGCTAATTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641896.1
CDS-3UTR TCA 90 bp GTTTCTTCTCAATTAGCGTTGCTGGAGATTTACATTGTCAGTCTTTGCAAAGAACAGTTACCCACAGTCTaGGAGTTTTCTCTGTTTAAC +
Preference number: 4 (lower is better)
Translates to: VSSQLALLEIYIVSLCKEQLPTV*EFSLFN
Trigger: GTTAAACAGAGAAAACTCTCAGACTGTGGGTAACTG...TTCTTTGCAAAGACTGACAATGTAAATCTCCAGCAACGCTAATTGAGAAGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641896.1
CDS-3UTR GCA 90 bp CTGAATATAAAGAAGTCAGCATTAACTACCATTCTATTCCTGTGTGATAGCTGTTACATTGTCAGTCTTTaGAAAGAACAGGACACTCGG +
Preference number: 4 (lower is better)
Translates to: LNIKKSALTTILFLCDSCYIVSL*KEQDTR
Trigger: CCGAGTGTCCTGTTCTTTGCAAAGACTGACAATGTA...ACAGCTATCACACAGGAATAGAATGGTAGTTAATGCTGACTTCTTTATATTCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641896.1
3UTR CAA 72 bp ATTCATACTCCTAGACTGAAAACCCTACTCTATCGCTaGCTAGCCATTTTGCATCAGTCAAATTATGTAACT +
Preference number: 4 (lower is better)
Translates to: IHTPRLKTLLYR*LAILHQSNYVT
Trigger: AGTTACATAATTTGACTGATGCAAAATGGCTAGCAAGCGATAGAGTAGGGTTTTCAGTCTAGGAGTATGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641896.1
CDS-3UTR CAA 90 bp TTCTGGGGTGATCTGGCCTTCAGACTCCATCAGCCCAACACTAATGCCCAAGTCTCCTGGGACATACATTaGCTCCTTCAGTTCACCTCC +
Preference number: 5 (lower is better)
Translates to: FWGDLAFRLHQPNTNAQVSWDIH*LLQFTS
Trigger: GGAGGTGAACTGAAGGAGCAAATGTATGTCCCAGGA...GACTTGGGCATTAGTGTTGGGCTGATGGAGTCTGAAGGCCAGATCACCCCAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641896.1
CDS-3UTR CAA 90 bp TTCTGGGGTGATCTGGCCTTCAGACTCCATCAGCCCAACACTAATGCCCAAGTCACCATATCCTTACCCTaGGATACTGTCTCAAGCTAC +
Preference number: 5 (lower is better)
Translates to: FWGDLAFRLHQPNTNAQVTISLP*DTVSSY
Trigger: GTAGCTTGAGACAGTATCCAAGGGTAAGGATATGGT...GACTTGGGCATTAGTGTTGGGCTGATGGAGTCTGAAGGCCAGATCACCCCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641896.1
CDS-3UTR CAA 90 bp TACCCACAGTCTGAGAGTTTTCTCTGTTTAACTTTCTCCAATGAGTCCATGCCTGAGACTGGTTTATCTTaGTGCTCTGGCCCCTGGGGA +
Preference number: 5 (lower is better)
Translates to: YPQSESFLCLTFSNESMPETGLS*CSGPWG
Trigger: TCCCCAGGGGCCAGAGCACAAAGATAAACCAGTCTC...AGGCATGGACTCATTGGAGAAAGTTAAACAGAGAAAACTCTCAGACTGTGGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000641896.1
CDS-3UTR CAA 90 bp GGCCTCTACCCAGCAACCAAACATTGCTACTCCTCAAGAGACTGGTTTATCTTTGCAGCTCATCCTGCATaGCCTGAAGAATTTCTCTTG +
Preference number: 5 (lower is better)
Translates to: GLYPATKHCYSSRDWFIFAAHPA*PEEFLL
Trigger: CAAGAGAAATTCTTCAGGCAATGCAGGATGAGCTGC...AAAGATAAACCAGTCTCTTGAGGAGTAGCAATGTTTGGTTGCTGGGTAGAGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641896.1
CDS-3UTR CAA 90 bp GTTTCTTCTCAATTAGCGTTGCTGGAGATTTACATTGTCAGTCTTTGCAAAGAAGCCCTGCACCTGCCTTaGCCTTCAATACTGTGGGGA +
Preference number: 5 (lower is better)
Translates to: VSSQLALLEIYIVSLCKEALHLP*PSILWG
Trigger: TCCCCACAGTATTGAAGGCAAAGGCAGGTGCAGGGC...TTCTTTGCAAAGACTGACAATGTAAATCTCCAGCAACGCTAATTGAGAAGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641896.1
CDS-3UTR CAA 90 bp TATCCTTACCCTTGGATACTGTCTCAAGCTACCTCTTTTTACCTCTTGTCAGGGACCCTACTCTATCGCTaGCTAGCCATTTTGCATCAG +
Preference number: 5 (lower is better)
Translates to: YPYPWILSQATSFYLLSGTLLYR*LAILHQ
Trigger: CTGATGCAAAATGGCTAGCAAGCGATAGAGTAGGGT...CCCTGACAAGAGGTAAAAAGAGGTAGCTTGAGACAGTATCCAAGGGTAAGGATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641896.1
CDS-3UTR CAA 90 bp TTAGCGTTGCTGGAGATTTACATTGTCAGTCTTTGCAAAGAACAGGACACTCGGTGTTATAGCATCCTGTaGAACGGAGAAGGGAAAGAG +
Preference number: 5 (lower is better)
Translates to: LALLEIYIVSLCKEQDTRCYSIL*NGEGKE
Trigger: CTCTTTCCCTTCTCCGTTCAACAGGATGCTATAACA...CCGAGTGTCCTGTTCTTTGCAAAGACTGACAATGTAAATCTCCAGCAACGCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641896.1
CDS-3UTR CAA 90 bp TACCCACAGTCTGAGAGTTTTCTCTGTTTAACTTTCTCCAATGAGTCCATGCCTATGGAATTCTGTGCCTaGATCCCATCTGCTGTGGTA +
Preference number: 5 (lower is better)
Translates to: YPQSESFLCLTFSNESMPMEFCA*IPSAVV
Trigger: TACCACAGCAGATGGGATCAAGGCACAGAATTCCAT...AGGCATGGACTCATTGGAGAAAGTTAAACAGAGAAAACTCTCAGACTGTGGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641896.1
CDS-3UTR CAA 90 bp TACCCACAGTCTGAGAGTTTTCTCTGTTTAACTTTCTCCAATGAGTCCATGCCTCCTGAAGAATTTCTCTaGTCCTCCCATGAGTTGCCA +
Preference number: 5 (lower is better)
Translates to: YPQSESFLCLTFSNESMPPEEFL*SSHELP
Trigger: TGGCAACTCATGGGAGGACAAGAGAAATTCTTCAGG...AGGCATGGACTCATTGGAGAAAGTTAAACAGAGAAAACTCTCAGACTGTGGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641896.1
CDS-3UTR CAA 90 bp TTAGCGTTGCTGGAGATTTACATTGTCAGTCTTTGCAAAGAACAGGACACTCGGTGGCTAAGATTAACGTaGATCTCCATCAAGCATCTG +
Preference number: 5 (lower is better)
Translates to: LALLEIYIVSLCKEQDTRWLRLT*ISIKHL
Trigger: CAGATGCTTGATGGAGATCAACGTTAATCTTAGCCA...CCGAGTGTCCTGTTCTTTGCAAAGACTGACAATGTAAATCTCCAGCAACGCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641896.1
CDS-3UTR CAA 90 bp TTAGCGTTGCTGGAGATTTACATTGTCAGTCTTTGCAAAGAACAGGACACTCGGTTACATTGTCAGTCTTaGCAAAGAACAGGACACTCG +
Preference number: 5 (lower is better)
Translates to: LALLEIYIVSLCKEQDTRLHCQS*QRTGHS
Trigger: CGAGTGTCCTGTTCTTTGCAAAGACTGACAATGTAA...CCGAGTGTCCTGTTCTTTGCAAAGACTGACAATGTAAATCTCCAGCAACGCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641896.1
CDS-3UTR CAA 90 bp CCCAGCAACCAAACATTGCTACTCCTCAAGAGACTGGTTTATCTTTGTGCTCTGCGCTTGCTAGCCATTTaGCATCAGTCAAATTATGTA +
Preference number: 5 (lower is better)
Translates to: PSNQTLLLLKRLVYLCALRLLAI*HQSNYV
Trigger: TACATAATTTGACTGATGCAAAATGGCTAGCAAGCG...CAGAGCACAAAGATAAACCAGTCTCTTGAGGAGTAGCAATGTTTGGTTGCTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641896.1
CDS-3UTR CAA 90 bp GTTTCTTCTCAATTAGCGTTGCTGGAGATTTACATTGTCAGTCTTTGCAAAGAACCCAGCAACCAAACATaGCTACTCCTCAAGAGACTG +
Preference number: 5 (lower is better)
Translates to: VSSQLALLEIYIVSLCKEPSNQT*LLLKRL
Trigger: CAGTCTCTTGAGGAGTAGCAATGTTTGGTTGCTGGG...TTCTTTGCAAAGACTGACAATGTAAATCTCCAGCAACGCTAATTGAGAAGAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641896.1
CDS-3UTR CAA 90 bp GTTTCTTCTCAATTAGCGTTGCTGGAGATTTACATTGTCAGTCTTTGCAAAGAATCCAAAGACTTCTCATaGGGGCCCTCTTTTCCCTCT +
Preference number: 5 (lower is better)
Translates to: VSSQLALLEIYIVSLCKESKDFS*GPSFPS
Trigger: AGAGGGAAAAGAGGGCCCCAATGAGAAGTCTTTGGA...TTCTTTGCAAAGACTGACAATGTAAATCTCCAGCAACGCTAATTGAGAAGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641896.1
CDS-3UTR CAA 90 bp CCCAGCAACCAAACATTGCTACTCCTCAAGAGACTGGTTTATCTTTGTGCTCTGCATTTTCATACATTCTaGGTATCAGTAATACCCACC +
Preference number: 5 (lower is better)
Translates to: PSNQTLLLLKRLVYLCALHFHTF*VSVIPT
Trigger: GGTGGGTATTACTGATACCAAGAATGTATGAAAATG...CAGAGCACAAAGATAAACCAGTCTCTTGAGGAGTAGCAATGTTTGGTTGCTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641896.1
CDS-3UTR CAA 90 bp TACCCACAGTCTGAGAGTTTTCTCTGTTTAACTTTCTCCAATGAGTCCATGCCTACCAGTGCCCTCTGGTaGTTAATGTTTACTGTTTTC +
Preference number: 5 (lower is better)
Translates to: YPQSESFLCLTFSNESMPTSALW*LMFTVF
Trigger: GAAAACAGTAAACATTAACAACCAGAGGGCACTGGT...AGGCATGGACTCATTGGAGAAAGTTAAACAGAGAAAACTCTCAGACTGTGGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641896.1
CDS-3UTR CAA 90 bp TATCCTTACCCTTGGATACTGTCTCAAGCTACCTCTTTTTACCTCTTGTCAGGGTCTTCTCAATTAGCGTaGCTGGAGATTTACATTGTC +
Preference number: 5 (lower is better)
Translates to: YPYPWILSQATSFYLLSGSSQLA*LEIYIV
Trigger: GACAATGTAAATCTCCAGCAACGCTAATTGAGAAGA...CCCTGACAAGAGGTAAAAAGAGGTAGCTTGAGACAGTATCCAAGGGTAAGGATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641896.1
CDS-3UTR CAA 90 bp CCCAGCAACCAAACATTGCTACTCCTCAAGAGACTGGTTTATCTTTGTGCTCTGACTCAAAATATGTTATaGGTCCCACATCATCAAAGG +
Preference number: 5 (lower is better)
Translates to: PSNQTLLLLKRLVYLCALTQNML*VPHHQR
Trigger: CCTTTGATGATGTGGGACCAATAACATATTTTGAGT...CAGAGCACAAAGATAAACCAGTCTCTTGAGGAGTAGCAATGTTTGGTTGCTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641896.1
CDS-3UTR CAA 90 bp TATCCTTACCCTTGGATACTGTCTCAAGCTACCTCTTTTTACCTCTTGTCAGGGCCCCTCCCCAATAAGTaGTTATGGTTCTTTAATACA +
Preference number: 5 (lower is better)
Translates to: YPYPWILSQATSFYLLSGPLPNK*LWFFNT
Trigger: TGTATTAAAGAACCATAACAACTTATTGGGGAGGGG...CCCTGACAAGAGGTAAAAAGAGGTAGCTTGAGACAGTATCCAAGGGTAAGGATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000641896.1
CDS-3UTR CAA 90 bp TACCCACAGTCTGAGAGTTTTCTCTGTTTAACTTTCTCCAATGAGTCCATGCCTAACAGGACACTCGGTTaGGTTAGTTGTTTCTTTCTA +
Preference number: 5 (lower is better)
Translates to: YPQSESFLCLTFSNESMPNRTLG*VSCFFL
Trigger: TAGAAAGAAACAACTAACCAAACCGAGTGTCCTGTT...AGGCATGGACTCATTGGAGAAAGTTAAACAGAGAAAACTCTCAGACTGTGGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641896.1
CDS-3UTR CAA 90 bp CTGAATATAAAGAAGTCAGCATTAACTACCATTCTATTCCTGTGTGATAGCTGTCTCATCACCCTAGTATaGTATCTCAAGGGCTCAGCC +
Preference number: 5 (lower is better)
Translates to: LNIKKSALTTILFLCDSCLITLV*YLKGSA
Trigger: GGCTGAGCCCTTGAGATACAATACTAGGGTGATGAG...ACAGCTATCACACAGGAATAGAATGGTAGTTAATGCTGACTTCTTTATATTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641896.1
CDS-3UTR CAA 90 bp GTTTCTTCTCAATTAGCGTTGCTGGAGATTTACATTGTCAGTCTTTGCAAAGAACAGAAGAAGAGGGATTaGTACAGGACTCTTCAAGAG +
Preference number: 5 (lower is better)
Translates to: VSSQLALLEIYIVSLCKEQKKRD*YRTLQE
Trigger: CTCTTGAAGAGTCCTGTACAAATCCCTCTTCTTCTG...TTCTTTGCAAAGACTGACAATGTAAATCTCCAGCAACGCTAATTGAGAAGAAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641896.1
CDS-3UTR CAA 90 bp TTCTCCAATGAGTCCATGCCTCATAGTCCACATTTCTTTCACGCAAAAGAAGAGCTAAGGCATATGCATTaGAATCAAGCCTTTCTGTTT +
Preference number: 5 (lower is better)
Translates to: FSNESMPHSPHFFHAKEELRHMH*NQAFLF
Trigger: AAACAGAAAGGCTTGATTCAAATGCATATGCCTTAG...CTCTTCTTTTGCGTGAAAGAAATGTGGACTATGAGGCATGGACTCATTGGAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641896.1
CDS TCA 90 bp TTTTTCATCCTTGGAATCTTCTCTATTCAACTTTCCCTGATGGGTTaGTGCCTGGTAGTCTACATTTCTTTTACTCAGAAGAAGAGGGAT +
Preference number: 5 (lower is better)
Translates to: FFILGIFSIQLSLMG*CLVVYISFTQKKRD
Trigger: ATCCCTCTTCTTCTGAGTAAAAGAAATGTAGACTACCAGGCATCAACCCATCAGGGAAAGTTGAATAGAGAAGATTCCAAGGATGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641896.1
CDS-3UTR CAA 90 bp GTTTCTTCTCAATTAGCGTTGCTGGAGATTTACATTGTCAGTCTTTGCAAAGAAACAAGTTTCTCCTCATaGGACTATGATAAGAGCCCA +
Preference number: 5 (lower is better)
Translates to: VSSQLALLEIYIVSLCKETSFSS*DYDKSP
Trigger: TGGGCTCTTATCATAGTCCAATGAGGAGAAACTTGT...TTCTTTGCAAAGACTGACAATGTAAATCTCCAGCAACGCTAATTGAGAAGAAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641896.1
CDS-3UTR CAA 90 bp CTGAATATAAAGAAGTCAGCATTAACTACCATTCTATTCCTGTGTGATAGCTGTCAGATTATAAAAACCTaGCTGTGTAGCTACTGGGTG +
Preference number: 5 (lower is better)
Translates to: LNIKKSALTTILFLCDSCQIIKT*LCSYWV
Trigger: CACCCAGTAGCTACACAGCAAGGTTTTTATAATCTG...ACAGCTATCACACAGGAATAGAATGGTAGTTAATGCTGACTTCTTTATATTCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641896.1
CDS-3UTR CAA 90 bp CTGAATATAAAGAAGTCAGCATTAACTACCATTCTATTCCTGTGTGATAGCTGTAAGGCATCTTTGAAATaGGCTGGATCTGAACAGATA +
Preference number: 5 (lower is better)
Translates to: LNIKKSALTTILFLCDSCKASLK*AGSEQI
Trigger: TATCTGTTCAGATCCAGCCAATTTCAAAGATGCCTT...ACAGCTATCACACAGGAATAGAATGGTAGTTAATGCTGACTTCTTTATATTCAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641896.1
CDS-3UTR CAA 90 bp CTGAATATAAAGAAGTCAGCATTAACTACCATTCTATTCCTGTGTGATAGCTGTATCTCTAAGGCATCTTaGAAATTGGCTGGATCTGAA +
Preference number: 5 (lower is better)
Translates to: LNIKKSALTTILFLCDSCISKAS*KLAGSE
Trigger: TTCAGATCCAGCCAATTTCAAAGATGCCTTAGAGAT...ACAGCTATCACACAGGAATAGAATGGTAGTTAATGCTGACTTCTTTATATTCAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641896.1
CDS-3UTR CAA 90 bp GTTTCTTCTCAATTAGCGTTGCTGGAGATTTACATTGTCAGTCTTTGCAAAGAAAATGGTGAGCGGTCTTaGTTGTCTTTCATTTTAAGA +
Preference number: 5 (lower is better)
Translates to: VSSQLALLEIYIVSLCKENGERS*LSFILR
Trigger: TCTTAAAATGAAAGACAACAAAGACCGCTCACCATT...TTCTTTGCAAAGACTGACAATGTAAATCTCCAGCAACGCTAATTGAGAAGAAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641896.1
CDS-3UTR CAA 90 bp CTGAATATAAAGAAGTCAGCATTAACTACCATTCTATTCCTGTGTGATAGCTGTTGCTGGAGATTTACATaGTCAGTCTTTGCAAAGAAC +
Preference number: 5 (lower is better)
Translates to: LNIKKSALTTILFLCDSCCWRFT*SVFAKN
Trigger: GTTCTTTGCAAAGACTGACAATGTAAATCTCCAGCA...ACAGCTATCACACAGGAATAGAATGGTAGTTAATGCTGACTTCTTTATATTCAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641896.1
CDS-3UTR CAA 90 bp GTTTCTTCTCAATTAGCGTTGCTGGAGATTTACATTGTCAGTCTTTGCAAAGAAATATTCATATGGTGTTaGGTCATAGGCACATTTTCC +
Preference number: 5 (lower is better)
Translates to: VSSQLALLEIYIVSLCKEIFIWC*VIGTFS
Trigger: GGAAAATGTGCCTATGACCAAACACCATATGAATAT...TTCTTTGCAAAGACTGACAATGTAAATCTCCAGCAACGCTAATTGAGAAGAAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641896.1
CDS TCA 72 bp CTTGGAATCTTCTCTATTCAACTTTCCCTGATGGGTTaGTGCCTGGTAGTCTACATTTCTTTTACTCAGAAG +
Preference number: 6 (lower is better)
Translates to: LGIFSIQLSLMG*CLVVYISFTQK
Trigger: CTTCTGAGTAAAAGAAATGTAGACTACCAGGCATCAACCCATCAGGGAAAGTTGAATAGAGAAGATTCCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641896.1