Pregenerated sensors for OR52E4 (Homo sapiens)
Ensembl gene IDs: ENSG00000180974Ensembl transcript IDs: ENST00000641726.1
Found 40 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGGGTCTGCCTTTCCCAGCCCACTGACTCAAATGTTAATCTCTTTTaGCAACACCCTCACAGACAAAACCAGGATCAATACTTTGTATCC | + |
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Preference number: 1 (lower is better) Translates to: WVCLSQPTDSNVNLF*QHPHRQNQDQYFVS Trigger: GGATACAAAGTATTGATCCTGGTTTTGTCTGTGAGGGTGTTGCCAAAAGAGATTAACATTTGAGTCAGTGGGCTGGGAAAGGCAGACCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641726.1 |
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| 3UTR-3UTR TCA 90 bp | GAGAAAACATGTCTCCGTAATACCCACACTGTAGTCTCTCATATCCCTAAATTCGGTGCCCACCCAGATTaGAGGTGGGTCTGCCTTTCC | + |
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Preference number: 2 (lower is better) Translates to: EKTCLRNTHTVVSHIPKFGAHPD*RWVCLS Trigger: GGAAAGGCAGACCCACCTTCAATCTGGGTGGGCACC...GAATTTAGGGATATGAGAGACTACAGTGTGGGTATTACGGAGACATGTTTTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641726.1 |
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| 3UTR-3UTR CCA 90 bp | AGCAGAAGCTGCAAAAATCAAATTAGAACCCATGCATACAGACCTAAAGAAAATAGTCGATATCAAGTCTaGCCCTGTGCTTACCATAGC | + |
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Preference number: 2 (lower is better) Translates to: SRSCKNQIRTHAYRPKENSRYQV*PCAYHS Trigger: GCTATGGTAAGCACAGGGCCAGACTTGATATCGACT...ATTTTCTTTAGGTCTGTATGCATGGGTTCTAATTTGATTTTTGCAGCTTCTGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000641726.1 |
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| 3UTR-3UTR TCA 90 bp | AGGCGACACATACAAGTAGTCACATCTAAAATGACTTTGCTTCAAGTGAGAAAAAAGAATACAAAGCTATaGAACGGACACTACTGCTGG | + |
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Preference number: 2 (lower is better) Translates to: RRHIQVVTSKMTLLQVRKKNTKL*NGHYCW Trigger: CCAGCAGTAGTGTCCGTTTCATAGCTTTGTATTCTT...TTTTCTCACTTGAAGCAAAGTCATTTTAGATGTGACTACTTGTATGTGTCGCCT 39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000641726.1 |
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| 3UTR-3UTR CCA 90 bp | AGGCGACACATACAAGTAGTCACATCTAAAATGACTTTGCTTCAAGTGAGAAAAAATGTTAATCTCTTTTaGCAACACCCTCACAGACAA | + |
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Preference number: 2 (lower is better) Translates to: RRHIQVVTSKMTLLQVRKNVNLF*QHPHRQ Trigger: TTGTCTGTGAGGGTGTTGCCAAAAGAGATTAACATT...TTTTCTCACTTGAAGCAAAGTCATTTTAGATGTGACTACTTGTATGTGTCGCCT 37% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000641726.1 |
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| 3UTR-3UTR TCA 90 bp | AGCAGAAGCTGCAAAAATCAAATTAGAACCCATGCATACAGACCTAAAGAAAATCAGATACTGAATAGGTaGTGTTGCTTTTCTTGTCTA | + |
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Preference number: 2 (lower is better) Translates to: SRSCKNQIRTHAYRPKENQILNR*CCFSCL Trigger: TAGACAAGAAAAGCAACATCACCTATTCAGTATCTG...ATTTTCTTTAGGTCTGTATGCATGGGTTCTAATTTGATTTTTGCAGCTTCTGCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000641726.1 |
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| 3UTR-3UTR CCA 90 bp | CGACACATACAAGTAGTCACATCTAAAATGACTTTGCTTCAAGTGAGAAAACATAACGGACACTACTGCTaGATTACAGCTTATTTTGTT | + |
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Preference number: 2 (lower is better) Translates to: RHIQVVTSKMTLLQVRKHNGHYC*ITAYFV Trigger: AACAAAATAAGCTGTAATCCAGCAGTAGTGTCCGTT...ATGTTTTCTCACTTGAAGCAAAGTCATTTTAGATGTGACTACTTGTATGTGTCG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000641726.1 |
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| 3UTR-3UTR CAA 90 bp | GAGAAAACATGTCTCCGTAATACCCACACTGTAGTCTCTCATATCCCTAAATTCTGGTGCCCACCCAGATaGAAGGTGGGTCTGCCTTTC | + |
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Preference number: 3 (lower is better) Translates to: EKTCLRNTHTVVSHIPKFWCPPR*KVGLPF Trigger: GAAAGGCAGACCCACCTTCAATCTGGGTGGGCACCA...GAATTTAGGGATATGAGAGACTACAGTGTGGGTATTACGGAGACATGTTTTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641726.1 |
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| 3UTR-3UTR CAA 90 bp | GAGAAAACATGTCTCCGTAATACCCACACTGTAGTCTCTCATATCCCTAAATTCCCTTTGTCCAGGTACTaGGAGAGAAGTAGGGGAAAC | + |
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Preference number: 3 (lower is better) Translates to: EKTCLRNTHTVVSHIPKFPLSRY*ERSRGN Trigger: GTTTCCCCTACTTCTCTCCAAGTACCTGGACAAAGG...GAATTTAGGGATATGAGAGACTACAGTGTGGGTATTACGGAGACATGTTTTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641726.1 |
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| 3UTR TCA 72 bp | GTGTTAAGACCAAGAACTGTCCAGATTCACAGATACTaGATAGGTGATGTTGCTTTTCTTGTCTACTTGGCT | + |
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Preference number: 3 (lower is better) Translates to: VLRPRTVQIHRY*IGDVAFLVYLA Trigger: AGCCAAGTAGACAAGAAAAGCAACATCACCTATTCAGTATCTGTGAATCTGGACAGTTCTTGGTCTTAACAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641726.1 |
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| 3UTR-3UTR CAA 90 bp | TTTGGATTCTGTAAAGAATACAAAGCTATGAAACGGACACTACTGCTGGATTACAGCTACCTATCACCCTaGTTTACAAGCAGTTCTACT | + |
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Preference number: 3 (lower is better) Translates to: FGFCKEYKAMKRTLLLDYSYLSP*FTSSST Trigger: AGTAGAACTGCTTGTAAACAAGGGTGATAGGTAGCT...GTAATCCAGCAGTAGTGTCCGTTTCATAGCTTTGTATTCTTTACAGAATCCAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641726.1 |
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| CDS-3UTR TCA 90 bp | TTTGGATTCTGTAAAGAATACAAAGCTATGAAACGGACACTACTGCTGGATTACGGTGCCCACCCAGATTaGAGGTGGGTCTGCCTTTCC | + |
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Preference number: 4 (lower is better) Translates to: FGFCKEYKAMKRTLLLDYGAHPD*RWVCLS Trigger: GGAAAGGCAGACCCACCTTCAATCTGGGTGGGCACC...GTAATCCAGCAGTAGTGTCCGTTTCATAGCTTTGTATTCTTTACAGAATCCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641726.1 |
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| CDS-3UTR GCA 90 bp | GAGAAAACATGTCTCCGTAATACCCACACTGTAGTCTCTCATATCCCTAAATTCGTTGATCTTAATGGGTaGACAGGCCAACCCGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: EKTCLRNTHTVVSHIPKFVDLNG*TGQPGQ Trigger: CTGGCCGGGTTGGCCTGTGCACCCATTAAGATCAAC...GAATTTAGGGATATGAGAGACTACAGTGTGGGTATTACGGAGACATGTTTTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641726.1 |
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| CDS-3UTR TCA 90 bp | GAGAAAACATGTCTCCGTAATACCCACACTGTAGTCTCTCATATCCCTAAATTCCCCAGCAAGTGTCACTaGATTCCTAAGTATGAAGGA | + |
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Preference number: 4 (lower is better) Translates to: EKTCLRNTHTVVSHIPKFPSKCH*IPKYEG Trigger: TCCTTCATACTTAGGAATTCAGTGACACTTGCTGGG...GAATTTAGGGATATGAGAGACTACAGTGTGGGTATTACGGAGACATGTTTTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641726.1 |
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| CDS-3UTR TCA 90 bp | AGGCGACACATACAAGTAGTCACATCTAAAATGACTTTGCTTCAAGTGAGAAAAGAGAACCACAGGTATTaGAGGCCTTTAGTCGGACAT | + |
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Preference number: 4 (lower is better) Translates to: RRHIQVVTSKMTLLQVRKENHRY*RPLVGH Trigger: ATGTCCGACTAAAGGCCTTCAATACCTGTGGTTCTC...TTTTCTCACTTGAAGCAAAGTCATTTTAGATGTGACTACTTGTATGTGTCGCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641726.1 |
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| CDS-3UTR TCA 90 bp | GAGAAAACATGTCTCCGTAATACCCACACTGTAGTCTCTCATATCCCTAAATTCAAGAATACAAAGCTATaGAACGGACACTACTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: EKTCLRNTHTVVSHIPKFKNTKL*NGHYCW Trigger: CCAGCAGTAGTGTCCGTTTCATAGCTTTGTATTCTT...GAATTTAGGGATATGAGAGACTACAGTGTGGGTATTACGGAGACATGTTTTCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641726.1 |
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| CDS-3UTR CCA 90 bp | TTTGGATTCTGTAAAGAATACAAAGCTATGAAACGGACACTACTGCTGGATTACAGTCGATATCAAGTCTaGCCCTGTGCTTACCATAGC | + |
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Preference number: 4 (lower is better) Translates to: FGFCKEYKAMKRTLLLDYSRYQV*PCAYHS Trigger: GCTATGGTAAGCACAGGGCCAGACTTGATATCGACT...GTAATCCAGCAGTAGTGTCCGTTTCATAGCTTTGTATTCTTTACAGAATCCAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641726.1 |
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| CDS-3UTR TCA 90 bp | AGGCGACACATACAAGTAGTCACATCTAAAATGACTTTGCTTCAAGTGAGAAAAAGCAGAATTGGAGCATaGGTCCAGGTTCTTAAAGAC | + |
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Preference number: 4 (lower is better) Translates to: RRHIQVVTSKMTLLQVRKSRIGA*VQVLKD Trigger: GTCTTTAAGAACCTGGACTCATGCTCCAATTCTGCT...TTTTCTCACTTGAAGCAAAGTCATTTTAGATGTGACTACTTGTATGTGTCGCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000641726.1 |
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| CDS-3UTR TCA 90 bp | AGGCGACACATACAAGTAGTCACATCTAAAATGACTTTGCTTCAAGTGAGAAAATTTAGTCGGACATCTTaGGAGGGAAGGCGAAAAACA | + |
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Preference number: 4 (lower is better) Translates to: RRHIQVVTSKMTLLQVRKFSRTS*EGRRKT Trigger: TGTTTTTCGCCTTCCCTCTCAAGATGTCCGACTAAA...TTTTCTCACTTGAAGCAAAGTCATTTTAGATGTGACTACTTGTATGTGTCGCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000641726.1 |
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| CDS-3UTR TCA 90 bp | CGACACATACAAGTAGTCACATCTAAAATGACTTTGCTTCAAGTGAGAAAACATGAGAGAGCAGGAATCTaGAAGAAGGAAAGGAGCAAA | + |
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Preference number: 4 (lower is better) Translates to: RHIQVVTSKMTLLQVRKHERAGI*KKERSK Trigger: TTTGCTCCTTTCCTTCTTTCAGATTCCTGCTCTCTC...ATGTTTTCTCACTTGAAGCAAAGTCATTTTAGATGTGACTACTTGTATGTGTCG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641726.1 |
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| CDS-3UTR GCA 90 bp | GAGAAAACATGTCTCCGTAATACCCACACTGTAGTCTCTCATATCCCTAAATTCAATATTTTCACAATTTaGTCTCGGATCTGCTTGGTC | + |
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Preference number: 4 (lower is better) Translates to: EKTCLRNTHTVVSHIPKFNIFTI*SRICLV Trigger: GACCAAGCAGATCCGAGAGCAAATTGTGAAAATATT...GAATTTAGGGATATGAGAGACTACAGTGTGGGTATTACGGAGACATGTTTTCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641726.1 |
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| CDS-3UTR CCA 90 bp | GAGAAAACATGTCTCCGTAATACCCACACTGTAGTCTCTCATATCCCTAAATTCAACGGACACTACTGCTaGATTACAGCTTATTTTGTT | + |
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Preference number: 4 (lower is better) Translates to: EKTCLRNTHTVVSHIPKFNGHYC*ITAYFV Trigger: AACAAAATAAGCTGTAATCCAGCAGTAGTGTCCGTT...GAATTTAGGGATATGAGAGACTACAGTGTGGGTATTACGGAGACATGTTTTCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641726.1 |
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| CDS-3UTR CCA 90 bp | GAGAAAACATGTCTCCGTAATACCCACACTGTAGTCTCTCATATCCCTAAATTCAATGTTAATCTCTTTTaGCAACACCCTCACAGACAA | + |
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Preference number: 4 (lower is better) Translates to: EKTCLRNTHTVVSHIPKFNVNLF*QHPHRQ Trigger: TTGTCTGTGAGGGTGTTGCCAAAAGAGATTAACATT...GAATTTAGGGATATGAGAGACTACAGTGTGGGTATTACGGAGACATGTTTTCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641726.1 |
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| CDS-3UTR CCA 90 bp | TTTGGATTCTGTAAAGAATACAAAGCTATGAAACGGACACTACTGCTGGATTACCTTTTCTTGTCTACTTaGCTATATCCGCCCCCATTT | + |
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Preference number: 4 (lower is better) Translates to: FGFCKEYKAMKRTLLLDYLFLST*LYPPPF Trigger: AAATGGGGGCGGATATAGCCAAGTAGACAAGAAAAG...GTAATCCAGCAGTAGTGTCCGTTTCATAGCTTTGTATTCTTTACAGAATCCAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000641726.1 |
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| CDS-3UTR CCA 90 bp | AGGCGACACATACAAGTAGTCACATCTAAAATGACTTTGCTTCAAGTGAGAAAATCATATTCCCCACAATaGCAATCAGGTACACAATAC | + |
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Preference number: 4 (lower is better) Translates to: RRHIQVVTSKMTLLQVRKSYSPQ*QSGTQY Trigger: GTATTGTGTACCTGATTGCCATTGTGGGGAATATGA...TTTTCTCACTTGAAGCAAAGTCATTTTAGATGTGACTACTTGTATGTGTCGCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000641726.1 |
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| CDS-3UTR CCA 90 bp | CGACACATACAAGTAGTCACATCTAAAATGACTTTGCTTCAAGTGAGAAAACATCCAAAGCTGATCTCTTaGAGGTTGAACCAGAAGATT | + |
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Preference number: 4 (lower is better) Translates to: RHIQVVTSKMTLLQVRKHPKLIS*RLNQKI Trigger: AATCTTCTGGTTCAACCTCCAAGAGATCAGCTTTGG...ATGTTTTCTCACTTGAAGCAAAGTCATTTTAGATGTGACTACTTGTATGTGTCG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641726.1 |
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| 3UTR CAA 72 bp | AGTCGATATCAAGTCTGGCCCTGTGCTTACCATAGCTaGAGCCTAATTGTTTTTCTAAGTTTTATAAAGTCT | + |
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Preference number: 4 (lower is better) Translates to: SRYQVWPCAYHS*SLIVFLSFIKS Trigger: AGACTTTATAAAACTTAGAAAAACAATTAGGCTCAAGCTATGGTAAGCACAGGGCCAGACTTGATATCGACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000641726.1 |
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| CDS-3UTR TCA 90 bp | TTTGGATTCTGTAAAGAATACAAAGCTATGAAACGGACACTACTGCTGGATTACGACTATGTTCAGTTTTaGTCACAAAGAGAATGGTCA | + |
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Preference number: 4 (lower is better) Translates to: FGFCKEYKAMKRTLLLDYDYVQF*SQREWS Trigger: TGACCATTCTCTTTGTGATCAAAACTGAACATAGTC...GTAATCCAGCAGTAGTGTCCGTTTCATAGCTTTGTATTCTTTACAGAATCCAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641726.1 |
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| CDS-3UTR TCA 90 bp | AGGCGACACATACAAGTAGTCACATCTAAAATGACTTTGCTTCAAGTGAGAAAACAGATTCACAGATACTaGATAGGTGATGTTGCTTTT | + |
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Preference number: 4 (lower is better) Translates to: RRHIQVVTSKMTLLQVRKQIHRY*IGDVAF Trigger: AAAAGCAACATCACCTATTCAGTATCTGTGAATCTG...TTTTCTCACTTGAAGCAAAGTCATTTTAGATGTGACTACTTGTATGTGTCGCCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641726.1 |
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| CDS-3UTR GCA 90 bp | AGCAGAAGCTGCAAAAATCAAATTAGAACCCATGCATACAGACCTAAAGAAAATAGAATTCAGGAATTGTaGTTAGCCAGTGTTAAGACC | + |
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Preference number: 4 (lower is better) Translates to: SRSCKNQIRTHAYRPKENRIQEL*LASVKT Trigger: GGTCTTAACACTGGCTAAGCACAATTCCTGAATTCT...ATTTTCTTTAGGTCTGTATGCATGGGTTCTAATTTGATTTTTGCAGCTTCTGCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000641726.1 |
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| CDS-3UTR CAA 90 bp | AGCAGAAGCTGCAAAAATCAAATTAGAACCCATGCATACAGACCTAAAGAAAATTGGTGCCCACCCAGATaGAAGGTGGGTCTGCCTTTC | + |
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Preference number: 5 (lower is better) Translates to: SRSCKNQIRTHAYRPKENWCPPR*KVGLPF Trigger: GAAAGGCAGACCCACCTTCAATCTGGGTGGGCACCA...ATTTTCTTTAGGTCTGTATGCATGGGTTCTAATTTGATTTTTGCAGCTTCTGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000641726.1 |
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| CDS-3UTR CAA 90 bp | GAGAAAACATGTCTCCGTAATACCCACACTGTAGTCTCTCATATCCCTAAATTCCCCAAAGCTGATCTCTaGGAGGTTGAACCAGAAGAT | + |
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Preference number: 5 (lower is better) Translates to: EKTCLRNTHTVVSHIPKFPKADL*EVEPED Trigger: ATCTTCTGGTTCAACCTCCAAGAGATCAGCTTTGGG...GAATTTAGGGATATGAGAGACTACAGTGTGGGTATTACGGAGACATGTTTTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641726.1 |
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| CDS-3UTR CAA 90 bp | AGGCGACACATACAAGTAGTCACATCTAAAATGACTTTGCTTCAAGTGAGAAAACCTTTGTCCAGGTACTaGGAGAGAAGTAGGGGAAAC | + |
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Preference number: 5 (lower is better) Translates to: RRHIQVVTSKMTLLQVRKPLSRY*ERSRGN Trigger: GTTTCCCCTACTTCTCTCCAAGTACCTGGACAAAGG...TTTTCTCACTTGAAGCAAAGTCATTTTAGATGTGACTACTTGTATGTGTCGCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000641726.1 |
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| CDS-3UTR CAA 90 bp | TTTGGATTCTGTAAAGAATACAAAGCTATGAAACGGACACTACTGCTGGATTACGCTTTTCTTGTCTACTaGGCTATATCCGCCCCCATT | + |
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Preference number: 5 (lower is better) Translates to: FGFCKEYKAMKRTLLLDYAFLVY*AISAPI Trigger: AATGGGGGCGGATATAGCCAAGTAGACAAGAAAAGC...GTAATCCAGCAGTAGTGTCCGTTTCATAGCTTTGTATTCTTTACAGAATCCAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000641726.1 |
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| CDS-3UTR CAA 90 bp | CGACACATACAAGTAGTCACATCTAAAATGACTTTGCTTCAAGTGAGAAAACATAAGATTCCTAGCATTTaGGGGATAGTGGATGTGGAC | + |
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Preference number: 5 (lower is better) Translates to: RHIQVVTSKMTLLQVRKHKIPSI*GIVDVD Trigger: GTCCACATCCACTATCCCCAAAATGCTAGGAATCTT...ATGTTTTCTCACTTGAAGCAAAGTCATTTTAGATGTGACTACTTGTATGTGTCG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000641726.1 |
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| CDS-3UTR CAA 90 bp | AGGCGACACATACAAGTAGTCACATCTAAAATGACTTTGCTTCAAGTGAGAAAAAGACTTCTTCTGATTTaGAAGCATGAGTACCCTGAT | + |
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Preference number: 5 (lower is better) Translates to: RRHIQVVTSKMTLLQVRKRLLLI*KHEYPD Trigger: ATCAGGGTACTCATGCTTCAAAATCAGAAGAAGTCT...TTTTCTCACTTGAAGCAAAGTCATTTTAGATGTGACTACTTGTATGTGTCGCCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000641726.1 |
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| CDS-3UTR CAA 90 bp | TTTGGATTCTGTAAAGAATACAAAGCTATGAAACGGACACTACTGCTGGATTACAAATATTTTCACAATTaGCTCTCGGATCTGCTTGGT | + |
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Preference number: 5 (lower is better) Translates to: FGFCKEYKAMKRTLLLDYKYFHN*LSDLLG Trigger: ACCAAGCAGATCCGAGAGCAAATTGTGAAAATATTT...GTAATCCAGCAGTAGTGTCCGTTTCATAGCTTTGTATTCTTTACAGAATCCAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641726.1 |
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| CDS-3UTR CAA 90 bp | AGCAGAAGCTGCAAAAATCAAATTAGAACCCATGCATACAGACCTAAAGAAAATTGTGCTTACCATAGCTaGAGCCTAATTGTTTTTCTA | + |
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Preference number: 5 (lower is better) Translates to: SRSCKNQIRTHAYRPKENCAYHS*SLIVFL Trigger: TAGAAAAACAATTAGGCTCAAGCTATGGTAAGCACA...ATTTTCTTTAGGTCTGTATGCATGGGTTCTAATTTGATTTTTGCAGCTTCTGCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000641726.1 |
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| CDS-3UTR CAA 90 bp | AGCAGAAGCTGCAAAAATCAAATTAGAACCCATGCATACAGACCTAAAGAAAATTATAGAATTCAGGAATaGTGCTTAGCCAGTGTTAAG | + |
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Preference number: 5 (lower is better) Translates to: SRSCKNQIRTHAYRPKENYRIQE*CLASVK Trigger: CTTAACACTGGCTAAGCACAATTCCTGAATTCTATA...ATTTTCTTTAGGTCTGTATGCATGGGTTCTAATTTGATTTTTGCAGCTTCTGCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000641726.1 |
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| CDS GCA 72 bp | CACCATGAGCCCATAGATTATGTTGATCTTAATGGGTaGACAGGCCAACCCGGCCAGACCCCTGTGCTCACA | + |
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Preference number: 6 (lower is better) Translates to: HHEPIDYVDLNG*TGQPGQTPVLT Trigger: TGTGAGCACAGGGGTCTGGCCGGGTTGGCCTGTGCACCCATTAAGATCAACATAATCTATGGGCTCATGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641726.1 |
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