Pregenerated sensors for OR4S2 (Homo sapiens)
Ensembl gene IDs: ENSG00000174982Ensembl transcript IDs: ENST00000641692.1
Found 42 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CACATTACAACCTTATCAATTCCCCACTACTCTATACATAGCCTAGGCAGCAGGAAGGAAATATATGAGTaGTACTGTACTGCCCGAAAC | + |
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Preference number: 2 (lower is better) Translates to: HITTLSIPHYSIHSLGSRKEIYE*YCTARN Trigger: GTTTCGGGCAGTACAGTATCACTCATATATTTCCTT...CCTGCTGCCTAGGCTATGTATAGAGTAGTGGGGAATTGATAAGGTTGTAATGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641692.1 |
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| 3UTR-3UTR TCA 90 bp | CACATTACAACCTTATCAATTCCCCACTACTCTATACATAGCCTAGGCAGCAGGACTTTATACATATGGTaGGTTTCTGCTTTCAGGGAT | + |
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Preference number: 2 (lower is better) Translates to: HITTLSIPHYSIHSLGSRTLYIW*VSAFRD Trigger: ATCCCTGAAAGCAGAAACTCACCATATGTATAAAGT...CCTGCTGCCTAGGCTATGTATAGAGTAGTGGGGAATTGATAAGGTTGTAATGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641692.1 |
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| 3UTR-3UTR CAA 90 bp | GATACTGTACTGCCCGAAACCTCACAATTTAAGCCCAAAAATATGAAAACACTTGAAAGCCAAGAGGAATaGCTCTTCTGCACTTTTGTG | + |
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Preference number: 3 (lower is better) Translates to: DTVLPETSQFKPKNMKTLESQEE*LFCTFV Trigger: CACAAAAGTGCAGAAGAGCAATTCCTCTTGGCTTTC...AAGTGTTTTCATATTTTTGGGCTTAAATTGTGAGGTTTCGGGCAGTACAGTATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000641692.1 |
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| 3UTR GCA 72 bp | CCAGTATTAATGTGGAGGACAGTGATGAAACACGCATaGACAAGGATAAGTGAAATCTACAGTGTGAACTAT | + |
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Preference number: 3 (lower is better) Translates to: PVLMWRTVMKHA*TRISEIYSVNY Trigger: ATAGTTCACACTGTAGATTTCACTTATCCTTGTGCATGCGTGTTTCATCACTGTCCTCCACATTAATACTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641692.1 |
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| CDS-3UTR GCA 90 bp | CACATTACAACCTTATCAATTCCCCACTACTCTATACATAGCCTAGGCAGCAGGGAGGCCCTTTCCTCTTaGTGCTCCCCAGATGTCAGC | + |
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Preference number: 4 (lower is better) Translates to: HITTLSIPHYSIHSLGSREALSS*CSPDVS Trigger: GCTGACATCTGGGGAGCAGCAAGAGGAAAGGGCCTC...CCTGCTGCCTAGGCTATGTATAGAGTAGTGGGGAATTGATAAGGTTGTAATGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641692.1 |
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| CDS-3UTR CCA 90 bp | CACATTACAACCTTATCAATTCCCCACTACTCTATACATAGCCTAGGCAGCAGGAACTTTCTCAATCTCTaGGCTCTGAGAAAGACCCCA | + |
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Preference number: 4 (lower is better) Translates to: HITTLSIPHYSIHSLGSRNFLNL*ALRKTP Trigger: TGGGGTCTTTCTCAGAGCCCAGAGATTGAGAAAGTT...CCTGCTGCCTAGGCTATGTATAGAGTAGTGGGGAATTGATAAGGTTGTAATGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641692.1 |
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| CDS-3UTR GCA 90 bp | GTCTCATTTTTCCACTCCAAATCCCATGAGGTTGTTATTGTCTTGATTGCACAGCAAACAGTTGCAACATaGACCCCACATAGGAGATGG | + |
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Preference number: 4 (lower is better) Translates to: VSFFHSKSHEVVIVLIAQQTVAT*TPHRRW Trigger: CCATCTCCTATGTGGGGTGCATGTTGCAACTGTTTG...CTGTGCAATCAAGACAATAACAACCTCATGGGATTTGGAGTGGAAAAATGAGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000641692.1 |
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| CDS-3UTR GCA 90 bp | AAATATATGAGTGATACTGTACTGCCCGAAACCTCACAATTTAAGCCCAAAAATAGAGGGCTTTGCGCCTaGCTTCTGCTGACTGCTTTC | + |
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Preference number: 4 (lower is better) Translates to: KYMSDTVLPETSQFKPKNRGLCA*LLLTAF Trigger: GAAAGCAGTCAGCAGAAGGCAGGCGCAAAGCCCTCT...ATTTTTGGGCTTAAATTGTGAGGTTTCGGGCAGTACAGTATCACTCATATATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000641692.1 |
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| CDS-3UTR CCA 90 bp | GATACTGTACTGCCCGAAACCTCACAATTTAAGCCCAAAAATATGAAAACACTTCCACAAAAGGGTAGTTaGACTACCAGAGCCACTTGG | + |
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Preference number: 4 (lower is better) Translates to: DTVLPETSQFKPKNMKTLPQKGS*TTRATW Trigger: CCAAGTGGCTCTGGTAGTCCAACTACCCTTTTGTGG...AAGTGTTTTCATATTTTTGGGCTTAAATTGTGAGGTTTCGGGCAGTACAGTATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000641692.1 |
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| CDS-3UTR TCA 90 bp | AAATATATGAGTGATACTGTACTGCCCGAAACCTCACAATTTAAGCCCAAAAATCACCATCTTATCCTCTaGAAAGGTCGTATCAGGGCG | + |
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Preference number: 4 (lower is better) Translates to: KYMSDTVLPETSQFKPKNHHLIL*KGRIRA Trigger: CGCCCTGATACGACCTTTTCAGAGGATAAGATGGTG...ATTTTTGGGCTTAAATTGTGAGGTTTCGGGCAGTACAGTATCACTCATATATTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000641692.1 |
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| CDS-3UTR TCA 90 bp | AAATATATGAGTGATACTGTACTGCCCGAAACCTCACAATTTAAGCCCAAAAATCTACAGTGTGAACTATaGGGCCCTTTCCTCTTGCTG | + |
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Preference number: 4 (lower is better) Translates to: KYMSDTVLPETSQFKPKNLQCEL*GPFLLL Trigger: CAGCAAGAGGAAAGGGCCTCATAGTTCACACTGTAG...ATTTTTGGGCTTAAATTGTGAGGTTTCGGGCAGTACAGTATCACTCATATATTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000641692.1 |
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| CDS-3UTR GCA 90 bp | GTCTCATTTTTCCACTCCAAATCCCATGAGGTTGTTATTGTCTTGATTGCACAGTCACCTAATGATACCTaGCATTTCACAGGGTCTTTG | + |
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Preference number: 4 (lower is better) Translates to: VSFFHSKSHEVVIVLIAQSPNDT*HFTGSL Trigger: CAAAGACCCTGTGAAATGGCAGGTATCATTAGGTGA...CTGTGCAATCAAGACAATAACAACCTCATGGGATTTGGAGTGGAAAAATGAGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000641692.1 |
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| CDS-3UTR CCA 90 bp | ATAATTCCCAGTATTAATGTGGAGGACAGTGATGAAACACGCATGCACAAGGATACCCCACATAGGAGATaGTTTTGTCCTTTGCTAACA | + |
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Preference number: 4 (lower is better) Translates to: IIPSINVEDSDETRMHKDTPHRR*FCPLLT Trigger: TGTTAGCAAAGGACAAAACCATCTCCTATGTGGGGT...ATCCTTGTGCATGCGTGTTTCATCACTGTCCTCCACATTAATACTGGGAATTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641692.1 |
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| CDS-3UTR CCA 90 bp | ATAATTCCCAGTATTAATGTGGAGGACAGTGATGAAACACGCATGCACAAGGATACTACCAGAGCCACTTaGATAATGGAGTGTAAGAAC | + |
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Preference number: 4 (lower is better) Translates to: IIPSINVEDSDETRMHKDTTRAT*IMECKN Trigger: GTTCTTACACTCCATTATCCAAGTGGCTCTGGTAGT...ATCCTTGTGCATGCGTGTTTCATCACTGTCCTCCACATTAATACTGGGAATTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641692.1 |
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| CDS-3UTR CCA 90 bp | AAATATATGAGTGATACTGTACTGCCCGAAACCTCACAATTTAAGCCCAAAAATAACTCCCCAGAGCAATaGTACCACTGTTGGCTGTCA | + |
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Preference number: 4 (lower is better) Translates to: KYMSDTVLPETSQFKPKNNSPEQ*YHCWLS Trigger: TGACAGCCAACAGTGGTACCATTGCTCTGGGGAGTT...ATTTTTGGGCTTAAATTGTGAGGTTTCGGGCAGTACAGTATCACTCATATATTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000641692.1 |
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| CDS-3UTR TCA 90 bp | ATAATTCCCAGTATTAATGTGGAGGACAGTGATGAAACACGCATGCACAAGGATAAAGAAATACATGGGTaGCTTAAACAGGTTGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: IIPSINVEDSDETRMHKDKEIHG*LKQVAQ Trigger: CTGAGCAACCTGTTTAAGTCACCCATGTATTTCTTT...ATCCTTGTGCATGCGTGTTTCATCACTGTCCTCCACATTAATACTGGGAATTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641692.1 |
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| CDS-3UTR TCA 90 bp | ATAATTCCCAGTATTAATGTGGAGGACAGTGATGAAACACGCATGCACAAGGATAAGGAAATATATGAGTaGTACTGTACTGCCCGAAAC | + |
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Preference number: 4 (lower is better) Translates to: IIPSINVEDSDETRMHKDKEIYE*YCTARN Trigger: GTTTCGGGCAGTACAGTATCACTCATATATTTCCTT...ATCCTTGTGCATGCGTGTTTCATCACTGTCCTCCACATTAATACTGGGAATTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641692.1 |
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| CDS-3UTR TCA 90 bp | GATACTGTACTGCCCGAAACCTCACAATTTAAGCCCAAAAATATGAAAACACTTGTGAAATCTACAGTGTaGACTATGAGGCCCTTTCCT | + |
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Preference number: 4 (lower is better) Translates to: DTVLPETSQFKPKNMKTLVKSTV*TMRPFP Trigger: AGGAAAGGGCCTCATAGTTCACACTGTAGATTTCAC...AAGTGTTTTCATATTTTTGGGCTTAAATTGTGAGGTTTCGGGCAGTACAGTATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000641692.1 |
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| CDS-3UTR GCA 90 bp | GTCTCATTTTTCCACTCCAAATCCCATGAGGTTGTTATTGTCTTGATTGCACAGGTGATGAAACACGCATaGACAAGGATAAGTGAAATC | + |
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Preference number: 4 (lower is better) Translates to: VSFFHSKSHEVVIVLIAQVMKHA*TRISEI Trigger: GATTTCACTTATCCTTGTGCATGCGTGTTTCATCAC...CTGTGCAATCAAGACAATAACAACCTCATGGGATTTGGAGTGGAAAAATGAGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000641692.1 |
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| CDS-3UTR CCA 90 bp | GATACTGTACTGCCCGAAACCTCACAATTTAAGCCCAAAAATATGAAAACACTTCAATGGTACCACTGTTaGCTGTCACAACAACACCAA | + |
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Preference number: 4 (lower is better) Translates to: DTVLPETSQFKPKNMKTLQWYHC*LSQQHQ Trigger: TTGGTGTTGTTGTGACAGCCAACAGTGGTACCATTG...AAGTGTTTTCATATTTTTGGGCTTAAATTGTGAGGTTTCGGGCAGTACAGTATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000641692.1 |
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| CDS-3UTR CCA 90 bp | ATAATTCCCAGTATTAATGTGGAGGACAGTGATGAAACACGCATGCACAAGGATTTCCCAGTATTAATGTaGAGGACAGTGATGAAACAC | + |
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Preference number: 4 (lower is better) Translates to: IIPSINVEDSDETRMHKDFPVLM*RTVMKH Trigger: GTGTTTCATCACTGTCCTCCACATTAATACTGGGAA...ATCCTTGTGCATGCGTGTTTCATCACTGTCCTCCACATTAATACTGGGAATTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641692.1 |
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| CDS-3UTR TCA 90 bp | AAATATATGAGTGATACTGTACTGCCCGAAACCTCACAATTTAAGCCCAAAAATATGTCTCCCGGTTCATaGTGGTCATATAATGTAGGG | + |
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Preference number: 4 (lower is better) Translates to: KYMSDTVLPETSQFKPKNMSPGS*WSYNVG Trigger: CCCTACATTATATGACCATCATGAACCGGGAGACAT...ATTTTTGGGCTTAAATTGTGAGGTTTCGGGCAGTACAGTATCACTCATATATTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000641692.1 |
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| CDS-3UTR TCA 90 bp | AAATATATGAGTGATACTGTACTGCCCGAAACCTCACAATTTAAGCCCAAAAATTCAGGGAAACTAGGATaGTGCTGTAGGAGATTAGCA | + |
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Preference number: 4 (lower is better) Translates to: KYMSDTVLPETSQFKPKNSGKLG*CCRRLA Trigger: TGCTAATCTCCTACAGCATCATCCTAGTTTCCCTGA...ATTTTTGGGCTTAAATTGTGAGGTTTCGGGCAGTACAGTATCACTCATATATTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000641692.1 |
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| CDS-3UTR TCA 90 bp | ATAATTCCCAGTATTAATGTGGAGGACAGTGATGAAACACGCATGCACAAGGATACTTTATACATATGGTaGGTTTCTGCTTTCAGGGAT | + |
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Preference number: 4 (lower is better) Translates to: IIPSINVEDSDETRMHKDTLYIW*VSAFRD Trigger: ATCCCTGAAAGCAGAAACTCACCATATGTATAAAGT...ATCCTTGTGCATGCGTGTTTCATCACTGTCCTCCACATTAATACTGGGAATTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641692.1 |
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| CDS-3UTR TCA 90 bp | ATAATTCCCAGTATTAATGTGGAGGACAGTGATGAAACACGCATGCACAAGGATATGCACAAGGATAAGTaGAATCTACAGTGTGAACTA | + |
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Preference number: 4 (lower is better) Translates to: IIPSINVEDSDETRMHKDMHKDK*NLQCEL Trigger: TAGTTCACACTGTAGATTTCACTTATCCTTGTGCAT...ATCCTTGTGCATGCGTGTTTCATCACTGTCCTCCACATTAATACTGGGAATTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641692.1 |
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| CDS-3UTR TCA 90 bp | AAATATATGAGTGATACTGTACTGCCCGAAACCTCACAATTTAAGCCCAAAAATTCATCTTGGGAGCTGTaGCTGAAGAGTAACAAATGT | + |
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Preference number: 4 (lower is better) Translates to: KYMSDTVLPETSQFKPKNSSWEL*LKSNKC Trigger: ACATTTGTTACTCTTCAGTCACAGCTCCCAAGATGA...ATTTTTGGGCTTAAATTGTGAGGTTTCGGGCAGTACAGTATCACTCATATATTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000641692.1 |
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| CDS-3UTR TCA 90 bp | AAATATATGAGTGATACTGTACTGCCCGAAACCTCACAATTTAAGCCCAAAAATGAAGTTATAGCCATCTaGGCAAGGACAGAGAAAACT | + |
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Preference number: 4 (lower is better) Translates to: KYMSDTVLPETSQFKPKNEVIAI*ARTEKT Trigger: AGTTTTCTCTGTCCTTGCTCAGATGGCTATAACTTC...ATTTTTGGGCTTAAATTGTGAGGTTTCGGGCAGTACAGTATCACTCATATATTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000641692.1 |
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| CDS-3UTR TCA 90 bp | AAATATATGAGTGATACTGTACTGCCCGAAACCTCACAATTTAAGCCCAAAAATGTTTCTATCTCTTCTTaGGTTAATTTGGGTGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: KYMSDTVLPETSQFKPKNVSISS*VNLGAA Trigger: AGCTGCACCCAAATTAACTCAAGAAGAGATAGAAAC...ATTTTTGGGCTTAAATTGTGAGGTTTCGGGCAGTACAGTATCACTCATATATTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000641692.1 |
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| CDS-3UTR TCA 90 bp | AAATATATGAGTGATACTGTACTGCCCGAAACCTCACAATTTAAGCCCAAAAATTTAGAAGGAAATATATaGGTGATACTGTACTGCCCG | + |
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Preference number: 4 (lower is better) Translates to: KYMSDTVLPETSQFKPKNLEGNI*VILYCP Trigger: CGGGCAGTACAGTATCACTCATATATTTCCTTCTAA...ATTTTTGGGCTTAAATTGTGAGGTTTCGGGCAGTACAGTATCACTCATATATTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000641692.1 |
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| CDS-3UTR TCA 90 bp | GATACTGTACTGCCCGAAACCTCACAATTTAAGCCCAAAAATATGAAAACACTTGGAAATACCAGCTGGTaGAAGATTTTCACACATTTT | + |
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Preference number: 4 (lower is better) Translates to: DTVLPETSQFKPKNMKTLGNTSW*KIFTHF Trigger: AAAATGTGTGAAAATCTTTCACCAGCTGGTATTTCC...AAGTGTTTTCATATTTTTGGGCTTAAATTGTGAGGTTTCGGGCAGTACAGTATC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000641692.1 |
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| CDS-3UTR CAA 90 bp | CACATTACAACCTTATCAATTCCCCACTACTCTATACATAGCCTAGGCAGCAGGGCAATGGTACCACTGTaGGCTGTCACAACAACACCA | + |
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Preference number: 5 (lower is better) Translates to: HITTLSIPHYSIHSLGSRAMVPL*AVTTTP Trigger: TGGTGTTGTTGTGACAGCCAACAGTGGTACCATTGC...CCTGCTGCCTAGGCTATGTATAGAGTAGTGGGGAATTGATAAGGTTGTAATGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641692.1 |
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| CDS-3UTR CAA 90 bp | CACATTACAACCTTATCAATTCCCCACTACTCTATACATAGCCTAGGCAGCAGGGAAAGCCAAGAGGAATaGCTCTTCTGCACTTTTGTG | + |
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Preference number: 5 (lower is better) Translates to: HITTLSIPHYSIHSLGSRESQEE*LFCTFV Trigger: CACAAAAGTGCAGAAGAGCAATTCCTCTTGGCTTTC...CCTGCTGCCTAGGCTATGTATAGAGTAGTGGGGAATTGATAAGGTTGTAATGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641692.1 |
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| CDS GCA 90 bp | AGATCTCAGTGCAACCAAAGAAATGTACTCCAAACAGTTGCAACATaGACCCCACATAGGAGATGGTTTTGTCCTTTGCTAACAGGTCAA | + |
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Preference number: 5 (lower is better) Translates to: RSQCNQRNVLQTVAT*TPHRRWFCPLLTGQ Trigger: TTGACCTGTTAGCAAAGGACAAAACCATCTCCTATGTGGGGTGCATGTTGCAACTGTTTGGAGTACATTTCTTTGGTTGCACTGAGATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641692.1 |
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| CDS-3UTR CAA 90 bp | GATACTGTACTGCCCGAAACCTCACAATTTAAGCCCAAAAATATGAAAACACTTGGTGACTTAAACAGGTaGCTCAGGCAAACTGTCAGC | + |
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Preference number: 5 (lower is better) Translates to: DTVLPETSQFKPKNMKTLGDLNR*LRQTVS Trigger: GCTGACAGTTTGCCTGAGCAACCTGTTTAAGTCACC...AAGTGTTTTCATATTTTTGGGCTTAAATTGTGAGGTTTCGGGCAGTACAGTATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000641692.1 |
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| CDS-3UTR CAA 90 bp | GTCTCATTTTTCCACTCCAAATCCCATGAGGTTGTTATTGTCTTGATTGCACAGATGTACTCCAAACAGTaGCAACATGCACCCCACATA | + |
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Preference number: 5 (lower is better) Translates to: VSFFHSKSHEVVIVLIAQMYSKQ*QHAPHI Trigger: TATGTGGGGTGCATGTTGCAACTGTTTGGAGTACAT...CTGTGCAATCAAGACAATAACAACCTCATGGGATTTGGAGTGGAAAAATGAGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000641692.1 |
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| CDS TCA 90 bp | AGTATTTTCCAGAGCTTGAGTTCACTTTATGTTTCTATCTCTTCTTaGGTTAATTTGGGTGCAGCTTCCCAAGGTAAAGTAACAGTGATG | + |
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Preference number: 5 (lower is better) Translates to: SIFQSLSSLYVSISS*VNLGAASQGKVTVM Trigger: CATCACTGTTACTTTACCTTGGGAAGCTGCACCCAAATTAACTCAAGAAGAGATAGAAACATAAAGTGAACTCAAGCTCTGGAAAATACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641692.1 |
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| CDS-3UTR CAA 90 bp | GATACTGTACTGCCCGAAACCTCACAATTTAAGCCCAAAAATATGAAAACACTTCCTAATAACATTTTATaGCATGTCTCCCGGTTCATG | + |
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Preference number: 5 (lower is better) Translates to: DTVLPETSQFKPKNMKTLPNNIL*HVSRFM Trigger: CATGAACCGGGAGACATGCAATAAAATGTTATTAGG...AAGTGTTTTCATATTTTTGGGCTTAAATTGTGAGGTTTCGGGCAGTACAGTATC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000641692.1 |
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| CDS-3UTR CAA 90 bp | AAATATATGAGTGATACTGTACTGCCCGAAACCTCACAATTTAAGCCCAAAAATGGTAGAAATGAGTCTTaGTTGTTCCTGGTTTTCTCA | + |
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Preference number: 5 (lower is better) Translates to: KYMSDTVLPETSQFKPKNGRNES*LFLVFS Trigger: TGAGAAAACCAGGAACAACAAAGACTCATTTCTACC...ATTTTTGGGCTTAAATTGTGAGGTTTCGGGCAGTACAGTATCACTCATATATTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000641692.1 |
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| CDS-3UTR CAA 90 bp | AAATATATGAGTGATACTGTACTGCCCGAAACCTCACAATTTAAGCCCAAAAATAGATGGTTTTGTCCTTaGCTAACAGGTCAACAATCA | + |
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Preference number: 5 (lower is better) Translates to: KYMSDTVLPETSQFKPKNRWFCP*LTGQQS Trigger: TGATTGTTGACCTGTTAGCAAAGGACAAAACCATCT...ATTTTTGGGCTTAAATTGTGAGGTTTCGGGCAGTACAGTATCACTCATATATTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000641692.1 |
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| CDS CAA 90 bp | GAGATTAGCAAGATAACAAAACTCCCCAGAGCAATGGTACCACTGTaGGCTGTCACAACAACACCAACAATGTATGTTTCTGTGCAGGCA | + |
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Preference number: 6 (lower is better) Translates to: EISKITKLPRAMVPL*AVTTTPTMYVSVQA Trigger: TGCCTGCACAGAAACATACATTGTTGGTGTTGTTGTGACAGCCAACAGTGGTACCATTGCTCTGGGGAGTTTTGTTATCTTGCTAATCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641692.1 |
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| CDS CCA 72 bp | ACTGAAAGGCTGGTAGAAATGAGTCTTTGTTGTTCCTaGTTTTCTCACCTAATGATACCTGCCATTTCACAG | + |
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Preference number: 6 (lower is better) Translates to: TERLVEMSLCCS*FSHLMIPAISQ Trigger: CTGTGAAATGGCAGGTATCATTAGGTGAGAAAACCAGGAACAACAAAGACTCATTTCTACCAGCCTTTCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641692.1 |
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| CDS CAA 72 bp | AAGATAACAAAACTCCCCAGAGCAATGGTACCACTGTaGGCTGTCACAACAACACCAACAATGTATGTTTCT | + |
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Preference number: 6 (lower is better) Translates to: KITKLPRAMVPL*AVTTTPTMYVS Trigger: AGAAACATACATTGTTGGTGTTGTTGTGACAGCCAACAGTGGTACCATTGCTCTGGGGAGTTTTGTTATCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641692.1 |
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