Pregenerated sensors for OR4M1 (Homo sapiens)
Ensembl gene IDs: ENSG00000176299Ensembl transcript IDs: ENST00000641200.1
Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
---|---|---|
3UTR CAA 90 bp | TTTCTCAACCTGATGGAGTTCTTCATTCTCGGCACTATTGACATTTaGGGCCAGATAATTCATGTGGGAGTCAGGGGCTGGGGGCTGTCC | + |
Preference number: 2 (lower is better) Translates to: FLNLMEFFILGTIDI*GQIIHVGVRGWGLS Trigger: GGACAGCCCCCAGCCCCTGACTCCCACATGAATTATCTGGCCCAAAATGTCAATAGTGCCGAGAATGAAGAACTCCATCAGGTTGAGAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000641200.1 |
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3UTR GCA 72 bp | AATTCATGTGGGAGTCAGGGGCTGGGGGCTGTCCTGTaGATTGTAAGATGTCTAAATAGTACAAGATGCCAA | + |
Preference number: 3 (lower is better) Translates to: NSCGSQGLGAVL*IVRCLNSTRCQ Trigger: TTGGCATCTTGTACTATTTAGACATCTTACAATGCACAGGACAGCCCCCAGCCCCTGACTCCCACATGAATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000641200.1 |
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3UTR CAA 72 bp | CTCTGGGCACTTCCAAATGTCCTCCAAGGGGTGAAATaGCTCTCAGTCCTTATTCCAATTATGTCCTCCATG | + |
Preference number: 4 (lower is better) Translates to: LWALPNVLQGVK*LSVLIPIMSSM Trigger: CATGGAGGACATAATTGGAATAAGGACTGAGAGCAATTTCACCCCTTGGAGGACATTTGGAAGTGCCCAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641200.1 |