RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OR4K2 (Homo sapiens)

Ensembl gene IDs: ENSG00000165762

Ensembl transcript IDs: ENST00000641522.1, ENST00000641785.1, ENST00000641885.1

Found 170 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCGCTGGTGAGCAAGATGATGATGAGATGTGAGGGAAAGCAACTGTaGCAGCCATACCTGTGTCCAGTGACTATTCACCACCTTCAAGAG +
Preference number: 1 (lower is better)
Translates to: PLVSKMMMRCEGKQL*QPYLCPVTIHHLQE
Trigger: CTCTTGAAGGTGGTGAATAGTCACTGGACACAGGTATGGCTGCCACAGTTGCTTTCCCTCACATCTCATCATCATCTTGCTCACCAGCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641885.1
3UTR GCA 90 bp TGTGTTGGGCTGAATTTAAAGCCATCTCCTGAGCCGCATGCAACCTaGAGGTCATGGGTTGGACAAGCTAGGCTTAAAGCTTATACAGTT +
Preference number: 1 (lower is better)
Translates to: CVGLNLKPSPEPHAT*RSWVGQARLKAYTV
Trigger: AACTGTATAAGCTTTAAGCCTAGCTTGTCCAACCCATGACCTGCAGGTTGCATGCGGCTCAGGAGATGGCTTTAAATTCAGCCCAACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641885.1
3UTR TCA 90 bp TCTACTGATATAATTGCCGCTGGTGAGCAAGATGATGATGAGATGTaGGGGAAAGCAACTGTGGCAGCCATACCTGTGTCCAGTGACTAT +
Preference number: 1 (lower is better)
Translates to: STDIIAAGEQDDDEM*GKATVAAIPVSSDY
Trigger: ATAGTCACTGGACACAGGTATGGCTGCCACAGTTGCTTTCCCTCACATCTCATCATCATCTTGCTCACCAGCGGCAATTATATCAGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641885.1
3UTR CCA 90 bp CATGAATCAATGATCCCAGTCACATTTCCAGTCTCATTTGAGTGTTaGTCCTACACGCTCCAGAATAATTTGTGCATATTTACCTCATGG +
Preference number: 1 (lower is better)
Translates to: HESMIPVTFPVSFEC*SYTLQNNLCIFTSW
Trigger: CCATGAGGTAAATATGCACAAATTATTCTGGAGCGTGTAGGACCAACACTCAAATGAGACTGGAAATGTGACTGGGATCATTGATTCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641885.1
3UTR TCA 90 bp CAACTACTTAATCTCATTATTGACTTGCCTTATAGAGTTGTCTGCTaGTCAGCTACACCTTTGAGGGTATTTTGGCAAATGTTCTTGAGT +
Preference number: 1 (lower is better)
Translates to: QLLNLIIDLPYRVVC*SATPLRVFWQMFLS
Trigger: ACTCAAGAACATTTGCCAAAATACCCTCAAAGGTGTAGCTGATCAGCAGACAACTCTATAAGGCAAGTCAATAATGAGATTAAGTAGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641885.1
3UTR GCA 90 bp GGAATAGCCAATGAAATTACAGTACATAAATGTTTCAAAGAAACTTaGCAACACGCCAGAATTCAGAGAATAGGGTCTTCAAGAAGACTT +
Preference number: 1 (lower is better)
Translates to: GIANEITVHKCFKET*QHARIQRIGSSRRL
Trigger: AAGTCTTCTTGAAGACCCTATTCTCTGAATTCTGGCGTGTTGGCAAGTTTCTTTGAAACATTTATGTACTGTAATTTCATTGGCTATTCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641885.1
3UTR GCA 90 bp CTAATTATATGGTATGCTAGGGTGAGTGAAGAAAAATACAGGCTTTaGAGACTCCAGACAAAGTGCTTACAAAGAGAGTCATTATTTCAA +
Preference number: 1 (lower is better)
Translates to: LIIWYARVSEEKYRL*RLQTKCLQRESLFQ
Trigger: TTGAAATAATGACTCTCTTTGTAAGCACTTTGTCTGGAGTCTGCAAAGCCTGTATTTTTCTTCACTCACCCTAGCATACCATATAATTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641885.1
3UTR-3UTR CCA 90 bp AGGGTGAGTGAAGAAAAATACAGGCTTTGCAGACTCCAGACAAAGTGCTTACAAGCTGAGGCAGGAGAATaGCGTGAATCCGGAAGGCAG +
Preference number: 2 (lower is better)
Translates to: RVSEEKYRLCRLQTKCLQAEAGE*RESGRQ
Trigger: CTGCCTTCCGGATTCACGCCATTCTCCTGCCTCAGC...TTGTAAGCACTTTGTCTGGAGTCTGCAAAGCCTGTATTTTTCTTCACTCACCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641885.1
3UTR-3UTR TCA 90 bp GGTGTCCAAAGTTTTGGCTTCTCTGGGCCACATTGGAAGAAGAATTGTGTTGGGAGGTACCATGAATATTaGCTCCTCACACTAAGCCAC +
Preference number: 2 (lower is better)
Translates to: GVQSFGFSGPHWKKNCVGRYHEY*LLTLSH
Trigger: GTGGCTTAGTGTGAGGAGTCAATATTCATGGTACCT...CCCAACACAATTCTTCTTCCAATGTGGCCCAGAGAAGCCAAAACTTTGGACACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641885.1
3UTR-3UTR TCA 90 bp GGTGTCCAAAGTTTTGGCTTCTCTGGGCCACATTGGAAGAAGAATTGTGTTGGGTGCAGTTATCCTTGGTaGAAGAGTGTCAGCATCTTG +
Preference number: 2 (lower is better)
Translates to: GVQSFGFSGPHWKKNCVGCSYPW*KSVSIL
Trigger: CAAGATGCTGACACTCTTTCACCAAGGATAACTGCA...CCCAACACAATTCTTCTTCCAATGTGGCCCAGAGAAGCCAAAACTTTGGACACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641885.1
3UTR-3UTR GCA 90 bp GGTGTCCAAAGTTTTGGCTTCTCTGGGCCACATTGGAAGAAGAATTGTGTTGGGCACCATCCTTACTATTaGTTAACGAGTCCATGGCCA +
Preference number: 2 (lower is better)
Translates to: GVQSFGFSGPHWKKNCVGHHPYY*LTSPWP
Trigger: TGGCCATGGACTCGTTAAGCAATAGTAAGGATGGTG...CCCAACACAATTCTTCTTCCAATGTGGCCCAGAGAAGCCAAAACTTTGGACACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641885.1
3UTR-3UTR TCA 90 bp AGGGTGAGTGAAGAAAAATACAGGCTTTGCAGACTCCAGACAAAGTGCTTACAAGAGCATCTCACTAAGTaGCTCAGTTGCTCACTGTGG +
Preference number: 2 (lower is better)
Translates to: RVSEEKYRLCRLQTKCLQEHLTK*LSCSLW
Trigger: CCACAGTGAGCAACTGAGTCACTTAGTGAGATGCTC...TTGTAAGCACTTTGTCTGGAGTCTGCAAAGCCTGTATTTTTCTTCACTCACCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641885.1
3UTR-3UTR TCA 90 bp AACTTGAGGACTTCAGGGGTGGCTGGCGAAGTTCTATTTTGTGACTTGAAATGTATGAAGGAGTGGCAATaGCACCAAGGCTTTTTGCCT +
Preference number: 2 (lower is better)
Translates to: NLRTSGVAGEVLFCDLKCMKEWQ*HQGFLP
Trigger: AGGCAAAAAGCCTTGGTGTCATTGCCACTCCTTCAT...ACATTTCAAGTCACAAAATAGAACTTCGCCAGCCACCCCTGAAGTCCTCAAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000641885.1
3UTR-3UTR GCA 90 bp GGTGTCCAAAGTTTTGGCTTCTCTGGGCCACATTGGAAGAAGAATTGTGTTGGGAGCAACCATCGTGTCTaGACAAAACAAAGTGTACTG +
Preference number: 2 (lower is better)
Translates to: GVQSFGFSGPHWKKNCVGSNHRV*TKQSVL
Trigger: CAGTACACTTTGTTTTGTGCAGACACGATGGTTGCT...CCCAACACAATTCTTCTTCCAATGTGGCCCAGAGAAGCCAAAACTTTGGACACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641885.1
3UTR-3UTR CCA 90 bp AACTTGAGGACTTCAGGGGTGGCTGGCGAAGTTCTATTTTGTGACTTGAAATGTCATTATCTCTGTCTCTaGAAACTCTGGTGGCAGCTG +
Preference number: 2 (lower is better)
Translates to: NLRTSGVAGEVLFCDLKCHYLCL*KLWWQL
Trigger: CAGCTGCCACCAGAGTTTCCAGAGACAGAGATAATG...ACATTTCAAGTCACAAAATAGAACTTCGCCAGCCACCCCTGAAGTCCTCAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641885.1
3UTR-3UTR TCA 90 bp AACTTGAGGACTTCAGGGGTGGCTGGCGAAGTTCTATTTTGTGACTTGAAATGTATTTCCAGTCTCATTTaGGTGTTGGTCCTACACGCT +
Preference number: 2 (lower is better)
Translates to: NLRTSGVAGEVLFCDLKCISSLI*VLVLHA
Trigger: AGCGTGTAGGACCAACACTCAAATGAGACTGGAAAT...ACATTTCAAGTCACAAAATAGAACTTCGCCAGCCACCCCTGAAGTCCTCAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641885.1
3UTR-3UTR TCA 90 bp GCCAATGAAATTACAGTACATAAATGTTTCAAAGAAACTTGCCAACACGCCAGAGGCAGGAGAATGGCGTaGATCCGGAAGGCAGAGTTT +
Preference number: 2 (lower is better)
Translates to: ANEITVHKCFKETCQHARGRRMA*IRKAEF
Trigger: AAACTCTGCCTTCCGGATTCACGCCATTCTCCTGCC...TCTGGCGTGTTGGCAAGTTTCTTTGAAACATTTATGTACTGTAATTTCATTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641885.1
3UTR-3UTR CCA 90 bp AACTTGAGGACTTCAGGGGTGGCTGGCGAAGTTCTATTTTGTGACTTGAAATGTTGCTTAACGAGTCCATaGCCATGTCACTGCAGTTAT +
Preference number: 2 (lower is better)
Translates to: NLRTSGVAGEVLFCDLKCCLTSP*PCHCSY
Trigger: ATAACTGCAGTGACATGGCCATGGACTCGTTAAGCA...ACATTTCAAGTCACAAAATAGAACTTCGCCAGCCACCCCTGAAGTCCTCAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641885.1
3UTR-3UTR CCA 90 bp AACTTGAGGACTTCAGGGGTGGCTGGCGAAGTTCTATTTTGTGACTTGAAATGTGTCTCATTTGAGTGTTaGTCCTACACGCTCCAGAAT +
Preference number: 2 (lower is better)
Translates to: NLRTSGVAGEVLFCDLKCVSFEC*SYTLQN
Trigger: ATTCTGGAGCGTGTAGGACCAACACTCAAATGAGAC...ACATTTCAAGTCACAAAATAGAACTTCGCCAGCCACCCCTGAAGTCCTCAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641885.1
3UTR-3UTR TCA 90 bp AACTTGAGGACTTCAGGGGTGGCTGGCGAAGTTCTATTTTGTGACTTGAAATGTAGCAGCATAATCCAGTaGTCACATTATCCTAAACCC +
Preference number: 2 (lower is better)
Translates to: NLRTSGVAGEVLFCDLKCSSIIQ*SHYPKP
Trigger: GGGTTTAGGATAATGTGATCACTGGATTATGCTGCT...ACATTTCAAGTCACAAAATAGAACTTCGCCAGCCACCCCTGAAGTCCTCAAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641885.1
3UTR-3UTR GCA 90 bp GGTGTCCAAAGTTTTGGCTTCTCTGGGCCACATTGGAAGAAGAATTGTGTTGGGGTGGTTGGTAAAGATTaGTACACTTACGGCAATTTT +
Preference number: 2 (lower is better)
Translates to: GVQSFGFSGPHWKKNCVGVVGKD*YTYGNF
Trigger: AAAATTGCCGTAAGTGTAGCAATCTTTACCAACCAC...CCCAACACAATTCTTCTTCCAATGTGGCCCAGAGAAGCCAAAACTTTGGACACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641885.1
3UTR-3UTR GCA 90 bp AGGGTGAGTGAAGAAAAATACAGGCTTTGCAGACTCCAGACAAAGTGCTTACAAGACACCAAGGCTTTTTaGCTTTTGCCCTTACATCAC +
Preference number: 2 (lower is better)
Translates to: RVSEEKYRLCRLQTKCLQDTKAF*LLPLHH
Trigger: GTGATGTAAGGGCAAAAGGCAAAAAGCCTTGGTGTC...TTGTAAGCACTTTGTCTGGAGTCTGCAAAGCCTGTATTTTTCTTCACTCACCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000641885.1
3UTR-3UTR CCA 90 bp GCCAATGAAATTACAGTACATAAATGTTTCAAAGAAACTTGCCAACACGCCAGACTCTGGAAACTCTGGTaGCAGCTGGCACCATCCTTA +
Preference number: 2 (lower is better)
Translates to: ANEITVHKCFKETCQHARLWKLW*QLAPSL
Trigger: TAAGGATGGTGCCAGCTGCCACCAGAGTTTCCAGAG...TCTGGCGTGTTGGCAAGTTTCTTTGAAACATTTATGTACTGTAATTTCATTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641885.1
3UTR-3UTR CCA 90 bp GCCAATGAAATTACAGTACATAAATGTTTCAAAGAAACTTGCCAACACGCCAGAGAGGGAAAGCAACTGTaGCAGCCATACCTGTGTCCA +
Preference number: 2 (lower is better)
Translates to: ANEITVHKCFKETCQHAREGKQL*QPYLCP
Trigger: TGGACACAGGTATGGCTGCCACAGTTGCTTTCCCTC...TCTGGCGTGTTGGCAAGTTTCTTTGAAACATTTATGTACTGTAATTTCATTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641885.1
3UTR CAA 90 bp CTACAGCAGTATGGAGTTCCTAAGGATTATAGGAATCTTGCTAGCTaGTCATACTTTAGGAGCATCTCACTAAGTGACTCAGTTGCTCAC +
Preference number: 2 (lower is better)
Translates to: LQQYGVPKDYRNLAS*SYFRSISLSDSVAH
Trigger: GTGAGCAACTGAGTCACTTAGTGAGATGCTCCTAAAGTATGACAAGCTAGCAAGATTCCTATAATCCTTAGGAACTCCATACTGCTGTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641885.1
3UTR-3UTR TCA 90 bp GCATTCAATTGTTGTCAAGCTTCACAGCTTCCTAAACACGTAGAGGAAGATGAATATAGAGTTGTCTGCTaGTCAGCTACACCTTTGAGG +
Preference number: 2 (lower is better)
Translates to: AFNCCQASQLPKHVEEDEYRVVC*SATPLR
Trigger: CCTCAAAGGTGTAGCTGATCAGCAGACAACTCTATA...TTCATCTTCCTCTACGTGTTTAGGAAGCTGTGAAGCTTGACAACAATTGAATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641885.1
3UTR-3UTR TCA 90 bp AACTTGAGGACTTCAGGGGTGGCTGGCGAAGTTCTATTTTGTGACTTGAAATGTGATTTCATTGGCATCTaGGAGTACATGCAAGAAGTT +
Preference number: 2 (lower is better)
Translates to: NLRTSGVAGEVLFCDLKCDFIGI*EYMQEV
Trigger: AACTTCTTGCATGTACTCTCAGATGCCAATGAAATC...ACATTTCAAGTCACAAAATAGAACTTCGCCAGCCACCCCTGAAGTCCTCAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641885.1
3UTR-3UTR TCA 90 bp AGGGTGAGTGAAGAAAAATACAGGCTTTGCAGACTCCAGACAAAGTGCTTACAAGAGTTGTCATCGAGATaGACAAACTTGAGGACTTCA +
Preference number: 2 (lower is better)
Translates to: RVSEEKYRLCRLQTKCLQELSSR*TNLRTS
Trigger: TGAAGTCCTCAAGTTTGTTCATCTCGATGACAACTC...TTGTAAGCACTTTGTCTGGAGTCTGCAAAGCCTGTATTTTTCTTCACTCACCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641885.1
3UTR-3UTR CCA 90 bp AGGGTGAGTGAAGAAAAATACAGGCTTTGCAGACTCCAGACAAAGTGCTTACAACTCAGTTGCTCACTGTaGGTAATTGTCATTATCTCC +
Preference number: 2 (lower is better)
Translates to: RVSEEKYRLCRLQTKCLQLSCSL*VIVIIS
Trigger: GGAGATAATGACAATTACCCACAGTGAGCAACTGAG...TTGTAAGCACTTTGTCTGGAGTCTGCAAAGCCTGTATTTTTCTTCACTCACCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641885.1
3UTR-3UTR CCA 90 bp GCCAATGAAATTACAGTACATAAATGTTTCAAAGAAACTTGCCAACACGCCAGAAACTCTGGTGGCAGCTaGCACCATCCTTACTATTGC +
Preference number: 2 (lower is better)
Translates to: ANEITVHKCFKETCQHARNSGGS*HHPYYC
Trigger: GCAATAGTAAGGATGGTGCCAGCTGCCACCAGAGTT...TCTGGCGTGTTGGCAAGTTTCTTTGAAACATTTATGTACTGTAATTTCATTGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641885.1
3UTR-3UTR CCA 90 bp GCCAATGAAATTACAGTACATAAATGTTTCAAAGAAACTTGCCAACACGCCAGAGGGTGTCCAAAGTTTTaGCTTCTCTGGGCCACATTG +
Preference number: 2 (lower is better)
Translates to: ANEITVHKCFKETCQHARGCPKF*LLWATL
Trigger: CAATGTGGCCCAGAGAAGCCAAAACTTTGGACACCC...TCTGGCGTGTTGGCAAGTTTCTTTGAAACATTTATGTACTGTAATTTCATTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641885.1
3UTR-3UTR TCA 90 bp AGGGTGAGTGAAGAAAAATACAGGCTTTGCAGACTCCAGACAAAGTGCTTACAAGAATACATGAATCAATaGTCCCAGTCACATTTCCAG +
Preference number: 2 (lower is better)
Translates to: RVSEEKYRLCRLQTKCLQEYMNQ*SQSHFQ
Trigger: CTGGAAATGTGACTGGGATCATTGATTCATGTATTC...TTGTAAGCACTTTGTCTGGAGTCTGCAAAGCCTGTATTTTTCTTCACTCACCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641885.1
3UTR-3UTR TCA 90 bp AACTTGAGGACTTCAGGGGTGGCTGGCGAAGTTCTATTTTGTGACTTGAAATGTATTAGATGCACCAAATaGGCTTTAGAAAGCACAAGT +
Preference number: 2 (lower is better)
Translates to: NLRTSGVAGEVLFCDLKCIRCTK*ALESTS
Trigger: ACTTGTGCTTTCTAAAGCTCATTTGGTGCATCTAAT...ACATTTCAAGTCACAAAATAGAACTTCGCCAGCCACCCCTGAAGTCCTCAAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641885.1
3UTR-3UTR GCA 90 bp AACTTGAGGACTTCAGGGGTGGCTGGCGAAGTTCTATTTTGTGACTTGAAATGTAGCCAAGTTTCTCTGTaGAAAATAGATTCCACCAAT +
Preference number: 2 (lower is better)
Translates to: NLRTSGVAGEVLFCDLKCSQVSL*KIDSTN
Trigger: ATTGGTGGAATCTATTTTGCACAGAGAAACTTGGCT...ACATTTCAAGTCACAAAATAGAACTTCGCCAGCCACCCCTGAAGTCCTCAAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000641885.1
3UTR-3UTR GCA 90 bp AGGGTGAGTGAAGAAAAATACAGGCTTTGCAGACTCCAGACAAAGTGCTTACAATGTTTCAAAGAAACTTaGCAACACGCCAGAATTCAG +
Preference number: 2 (lower is better)
Translates to: RVSEEKYRLCRLQTKCLQCFKET*QHARIQ
Trigger: CTGAATTCTGGCGTGTTGGCAAGTTTCTTTGAAACA...TTGTAAGCACTTTGTCTGGAGTCTGCAAAGCCTGTATTTTTCTTCACTCACCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641885.1
3UTR-3UTR TCA 90 bp AGGGTGAGTGAAGAAAAATACAGGCTTTGCAGACTCCAGACAAAGTGCTTACAACTACAAATTGATTTTTaGAGCCAAGTTTCTCTGTGC +
Preference number: 2 (lower is better)
Translates to: RVSEEKYRLCRLQTKCLQLQIDF*SQVSLC
Trigger: GCACAGAGAAACTTGGCTTCAAAAATCAATTTGTAG...TTGTAAGCACTTTGTCTGGAGTCTGCAAAGCCTGTATTTTTCTTCACTCACCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000641885.1
3UTR-3UTR GCA 90 bp AACTTGAGGACTTCAGGGGTGGCTGGCGAAGTTCTATTTTGTGACTTGAAATGTATCTCATTATTGACTTaGCTTATAGAGTTGTCTGCT +
Preference number: 2 (lower is better)
Translates to: NLRTSGVAGEVLFCDLKCISLLT*LIELSA
Trigger: AGCAGACAACTCTATAAGGCAAGTCAATAATGAGAT...ACATTTCAAGTCACAAAATAGAACTTCGCCAGCCACCCCTGAAGTCCTCAAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641885.1
3UTR-3UTR GCA 90 bp GCATTCAATTGTTGTCAAGCTTCACAGCTTCCTAAACACGTAGAGGAAGATGAACACTCTTCTTATAAATaGTCCAGAACTCCCTCAGTT +
Preference number: 2 (lower is better)
Translates to: AFNCCQASQLPKHVEEDEHSSYK*SRTPSV
Trigger: AACTGAGGGAGTTCTGGAGCATTTATAAGAAGAGTG...TTCATCTTCCTCTACGTGTTTAGGAAGCTGTGAAGCTTGACAACAATTGAATGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641885.1
3UTR-3UTR CCA 90 bp AACTTGAGGACTTCAGGGGTGGCTGGCGAAGTTCTATTTTGTGACTTGAAATGTCCTTTGAGGGTATTTTaGCAAATGTTCTTGAGTTTT +
Preference number: 2 (lower is better)
Translates to: NLRTSGVAGEVLFCDLKCPLRVF*QMFLSF
Trigger: AAAACTCAAGAACATTTGCCAAAATACCCTCAAAGG...ACATTTCAAGTCACAAAATAGAACTTCGCCAGCCACCCCTGAAGTCCTCAAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000641885.1
3UTR-3UTR CCA 90 bp AACTTGAGGACTTCAGGGGTGGCTGGCGAAGTTCTATTTTGTGACTTGAAATGTCTTATGAATTTGTGTTaGGCTGAATTTAAAGCCATC +
Preference number: 2 (lower is better)
Translates to: NLRTSGVAGEVLFCDLKCLMNLC*AEFKAI
Trigger: GATGGCTTTAAATTCAGCCCAACACAAATTCATAAG...ACATTTCAAGTCACAAAATAGAACTTCGCCAGCCACCCCTGAAGTCCTCAAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641885.1
3UTR-3UTR CCA 90 bp GCCAATGAAATTACAGTACATAAATGTTTCAAAGAAACTTGCCAACACGCCAGATTCTCTGGGCCACATTaGAAGAAGAATTGTGTTGGG +
Preference number: 2 (lower is better)
Translates to: ANEITVHKCFKETCQHARFSGPH*KKNCVG
Trigger: CCCAACACAATTCTTCTTCCAATGTGGCCCAGAGAA...TCTGGCGTGTTGGCAAGTTTCTTTGAAACATTTATGTACTGTAATTTCATTGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641885.1
3UTR-3UTR TCA 90 bp GCCAATGAAATTACAGTACATAAATGTTTCAAAGAAACTTGCCAACACGCCAGAGATCAGCTACACCTTTaGGGGTATTTTGGCAAATGT +
Preference number: 2 (lower is better)
Translates to: ANEITVHKCFKETCQHARDQLHL*GYFGKC
Trigger: ACATTTGCCAAAATACCCTCAAAGGTGTAGCTGATC...TCTGGCGTGTTGGCAAGTTTCTTTGAAACATTTATGTACTGTAATTTCATTGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641885.1
3UTR-3UTR CCA 90 bp GCCAATGAAATTACAGTACATAAATGTTTCAAAGAAACTTGCCAACACGCCAGACTTAGCGGATTTCATTaGCATCTGAGAGTACATGCA +
Preference number: 2 (lower is better)
Translates to: ANEITVHKCFKETCQHARLSGFH*HLRVHA
Trigger: TGCATGTACTCTCAGATGCCAATGAAATCCGCTAAG...TCTGGCGTGTTGGCAAGTTTCTTTGAAACATTTATGTACTGTAATTTCATTGGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641885.1
3UTR-3UTR GCA 90 bp GCCAATGAAATTACAGTACATAAATGTTTCAAAGAAACTTGCCAACACGCCAGATCATATTTTCTGATTTaGAGAATTCTCCAGCCTCCC +
Preference number: 2 (lower is better)
Translates to: ANEITVHKCFKETCQHARSYFLI*RILQPP
Trigger: GGGAGGCTGGAGAATTCTGCAAATCAGAAAATATGA...TCTGGCGTGTTGGCAAGTTTCTTTGAAACATTTATGTACTGTAATTTCATTGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641885.1
3UTR-3UTR CCA 90 bp GCATTCAATTGTTGTCAAGCTTCACAGCTTCCTAAACACGTAGAGGAAGATGAACTTACGGCAATTTTATaGACGTCATTAACATTCGAA +
Preference number: 2 (lower is better)
Translates to: AFNCCQASQLPKHVEEDELTAIL*TSLTFE
Trigger: TTCGAATGTTAATGACGTCCATAAAATTGCCGTAAG...TTCATCTTCCTCTACGTGTTTAGGAAGCTGTGAAGCTTGACAACAATTGAATGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641885.1
3UTR CAA 90 bp CTCAGTTGTGTTATTGCAGATAGTGCAGATCACTTAAAATTATACTaGCCTGCTTATCTTGTATTCTCTGCAGAACATTATCTCTGTCTC +
Preference number: 2 (lower is better)
Translates to: LSCVIADSADHLKLY*PAYLVFSAEHYLCL
Trigger: GAGACAGAGATAATGTTCTGCAGAGAATACAAGATAAGCAGGCAAGTATAATTTTAAGTGATCTGCACTATCTGCAATAACACAACTGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641885.1
3UTR-3UTR CCA 90 bp GCCAATGAAATTACAGTACATAAATGTTTCAAAGAAACTTGCCAACACGCCAGAGCCCTCACAAATTCTTaGCAATTACAATTTGGTAAG +
Preference number: 2 (lower is better)
Translates to: ANEITVHKCFKETCQHARALTNS*QLQFGK
Trigger: CTTACCAAATTGTAATTGCCAAGAATTTGTGAGGGC...TCTGGCGTGTTGGCAAGTTTCTTTGAAACATTTATGTACTGTAATTTCATTGGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641885.1
3UTR-3UTR GCA 90 bp GCCAATGAAATTACAGTACATAAATGTTTCAAAGAAACTTGCCAACACGCCAGAAACAGTTTTTCCATCTaGATTCAATTGTTGTCAAGC +
Preference number: 2 (lower is better)
Translates to: ANEITVHKCFKETCQHARNSFSI*IQLLSS
Trigger: GCTTGACAACAATTGAATGCAGATGGAAAAACTGTT...TCTGGCGTGTTGGCAAGTTTCTTTGAAACATTTATGTACTGTAATTTCATTGGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641885.1
3UTR-3UTR GCA 90 bp GCCAATGAAATTACAGTACATAAATGTTTCAAAGAAACTTGCCAACACGCCAGACTCCAGAATAATTTGTaGATATTTACCTCATGGTGT +
Preference number: 2 (lower is better)
Translates to: ANEITVHKCFKETCQHARLQNNL*IFTSWC
Trigger: ACACCATGAGGTAAATATGCACAAATTATTCTGGAG...TCTGGCGTGTTGGCAAGTTTCTTTGAAACATTTATGTACTGTAATTTCATTGGC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641885.1
3UTR GCA 72 bp AGGCAGGAGAATGGCGTGAATCCGGAAGGCAGAGTTTaGAATGAGCGGAGATCACGCTACTGCACTCCAGCC +
Preference number: 3 (lower is better)
Translates to: RQENGVNPEGRV*NERRSRYCTPA
Trigger: GGCTGGAGTGCAGTAGCGTGATCTCCGCTCATTGCAAACTCTGCCTTCCGGATTCACGCCATTCTCCTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641885.1
3UTR TCA 72 bp ATAATTGCCGCTGGTGAGCAAGATGATGATGAGATGTaGGGGAAAGCAACTGTGGCAGCCATACCTGTGTCC +
Preference number: 3 (lower is better)
Translates to: IIAAGEQDDDEM*GKATVAAIPVS
Trigger: GGACACAGGTATGGCTGCCACAGTTGCTTTCCCTCACATCTCATCATCATCTTGCTCACCAGCGGCAATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641885.1
3UTR GCA 72 bp GGAAACTCTGGTGGCAGCTGGCACCATCCTTACTATTaGTTAACGAGTCCATGGCCATGTCACTGCAGTTAT +
Preference number: 3 (lower is better)
Translates to: GNSGGSWHHPYY*LTSPWPCHCSY
Trigger: ATAACTGCAGTGACATGGCCATGGACTCGTTAAGCAATAGTAAGGATGGTGCCAGCTGCCACCAGAGTTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641885.1
3UTR TCA 72 bp ATGAATTTGTGTTGGGCTGAATTTAAAGCCATCTCCTaGGCCGCATGCAACCTGCAGGTCATGGGTTGGACA +
Preference number: 3 (lower is better)
Translates to: MNLCWAEFKAIS*AACNLQVMGWT
Trigger: TGTCCAACCCATGACCTGCAGGTTGCATGCGGCTCAGGAGATGGCTTTAAATTCAGCCCAACACAAATTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641885.1
3UTR CCA 72 bp AGCAAGATGATGATGAGATGTGAGGGAAAGCAACTGTaGCAGCCATACCTGTGTCCAGTGACTATTCACCAC +
Preference number: 3 (lower is better)
Translates to: SKMMMRCEGKQL*QPYLCPVTIHH
Trigger: GTGGTGAATAGTCACTGGACACAGGTATGGCTGCCACAGTTGCTTTCCCTCACATCTCATCATCATCTTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641885.1
3UTR-3UTR CAA 90 bp AACTTGAGGACTTCAGGGGTGGCTGGCGAAGTTCTATTTTGTGACTTGAAATGTGCACCATCCTTACTATaGCTTAACGAGTCCATGGCC +
Preference number: 3 (lower is better)
Translates to: NLRTSGVAGEVLFCDLKCAPSLL*LNESMA
Trigger: GGCCATGGACTCGTTAAGCAATAGTAAGGATGGTGC...ACATTTCAAGTCACAAAATAGAACTTCGCCAGCCACCCCTGAAGTCCTCAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641885.1
3UTR-3UTR CAA 90 bp AGGGTGAGTGAAGAAAAATACAGGCTTTGCAGACTCCAGACAAAGTGCTTACAAGGGGTGTCCAAAGTTTaGGCTTCTCTGGGCCACATT +
Preference number: 3 (lower is better)
Translates to: RVSEEKYRLCRLQTKCLQGVSKV*ASLGHI
Trigger: AATGTGGCCCAGAGAAGCCAAAACTTTGGACACCCC...TTGTAAGCACTTTGTCTGGAGTCTGCAAAGCCTGTATTTTTCTTCACTCACCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641885.1
3UTR CCA 72 bp TTTGCCCTTACATCACATTACTGGGGTAATGTGCTCTaGAACACAATAGCTCCAGTTGCAGCCTCCAATGCA +
Preference number: 3 (lower is better)
Translates to: FALTSHYWGNVL*NTIAPVAASNA
Trigger: TGCATTGGAGGCTGCAACTGGAGCTATTGTGTTCCAGAGCACATTACCCCAGTAATGTGATGTAAGGGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641885.1
3UTR-3UTR CAA 90 bp GGTGTCCAAAGTTTTGGCTTCTCTGGGCCACATTGGAAGAAGAATTGTGTTGGGTTAAGTAGGAGTGGCTaGGGAACGTATGTGGAAAAT +
Preference number: 3 (lower is better)
Translates to: GVQSFGFSGPHWKKNCVGLSRSG*GTYVEN
Trigger: ATTTTCCACATACGTTCCCAAGCCACTCCTACTTAA...CCCAACACAATTCTTCTTCCAATGTGGCCCAGAGAAGCCAAAACTTTGGACACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641885.1
3UTR-3UTR CAA 90 bp GGTGTCCAAAGTTTTGGCTTCTCTGGGCCACATTGGAAGAAGAATTGTGTTGGGTCCATCTGCATTCAATaGTTGTCAAGCTTCACAGCT +
Preference number: 3 (lower is better)
Translates to: GVQSFGFSGPHWKKNCVGSICIQ*LSSFTA
Trigger: AGCTGTGAAGCTTGACAACAATTGAATGCAGATGGA...CCCAACACAATTCTTCTTCCAATGTGGCCCAGAGAAGCCAAAACTTTGGACACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641885.1
3UTR TCA 72 bp TTTGGAGGAGAGAGTTGTCATCGAGATGAACAAACTTaGGGACTTCAGGGGTGGCTGGCGAAGTTCTATTTT +
Preference number: 3 (lower is better)
Translates to: FGGESCHRDEQT*GLQGWLAKFYF
Trigger: AAAATAGAACTTCGCCAGCCACCCCTGAAGTCCTCAAGTTTGTTCATCTCGATGACAACTCTCTCCTCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641885.1
3UTR-3UTR CAA 90 bp AACTTGAGGACTTCAGGGGTGGCTGGCGAAGTTCTATTTTGTGACTTGAAATGTTCACTGCAGTTATCCTaGGTGAAAGAGTGTCAGCAT +
Preference number: 3 (lower is better)
Translates to: NLRTSGVAGEVLFCDLKCSLQLS*VKECQH
Trigger: ATGCTGACACTCTTTCACCAAGGATAACTGCAGTGA...ACATTTCAAGTCACAAAATAGAACTTCGCCAGCCACCCCTGAAGTCCTCAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641885.1
3UTR-3UTR CAA 90 bp AACTTGAGGACTTCAGGGGTGGCTGGCGAAGTTCTATTTTGTGACTTGAAATGTCAAAATGCACTGAACTaGAGCCCTCACAAATTCTTG +
Preference number: 3 (lower is better)
Translates to: NLRTSGVAGEVLFCDLKCQNALN*SPHKFL
Trigger: CAAGAATTTGTGAGGGCTCAAGTTCAGTGCATTTTG...ACATTTCAAGTCACAAAATAGAACTTCGCCAGCCACCCCTGAAGTCCTCAAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000641885.1
3UTR-3UTR CAA 90 bp AGGGTGAGTGAAGAAAAATACAGGCTTTGCAGACTCCAGACAAAGTGCTTACAAACTTGCCTTATAGAGTaGTCTGCTGATCAGCTACAC +
Preference number: 3 (lower is better)
Translates to: RVSEEKYRLCRLQTKCLQTCLIE*SADQLH
Trigger: GTGTAGCTGATCAGCAGACAACTCTATAAGGCAAGT...TTGTAAGCACTTTGTCTGGAGTCTGCAAAGCCTGTATTTTTCTTCACTCACCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641885.1
3UTR-3UTR CAA 90 bp AGGGTGAGTGAAGAAAAATACAGGCTTTGCAGACTCCAGACAAAGTGCTTACAACCCTCAGTTGTGTTATaGCAGATAGTGCAGATCACT +
Preference number: 3 (lower is better)
Translates to: RVSEEKYRLCRLQTKCLQPSVVL*QIVQIT
Trigger: AGTGATCTGCACTATCTGCAATAACACAACTGAGGG...TTGTAAGCACTTTGTCTGGAGTCTGCAAAGCCTGTATTTTTCTTCACTCACCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641885.1
3UTR-3UTR CAA 90 bp GCCAATGAAATTACAGTACATAAATGTTTCAAAGAAACTTGCCAACACGCCAGACCTGCAGGTCATGGGTaGGACAAGCTAGGCTTAAAG +
Preference number: 3 (lower is better)
Translates to: ANEITVHKCFKETCQHARPAGHG*DKLGLK
Trigger: CTTTAAGCCTAGCTTGTCCAACCCATGACCTGCAGG...TCTGGCGTGTTGGCAAGTTTCTTTGAAACATTTATGTACTGTAATTTCATTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641885.1
3UTR TCA 72 bp TCATTGGCATCTGAGAGTACATGCAAGAAGTTCACATaGATTAGATTTCCCTGGCTGTTTTCTTCTCCCCGT +
Preference number: 3 (lower is better)
Translates to: SLASESTCKKFT*IRFPWLFSSPR
Trigger: ACGGGGAGAAGAAAACAGCCAGGGAAATCTAATTCATGTGAACTTCTTGCATGTACTCTCAGATGCCAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641885.1
3UTR TCA 72 bp TTAAGCTGCTGGATAGGCAATTTGCAGAAAATGCAGTaGCAGAAGTCCATGTTGAACTGTACCATGAGCATG +
Preference number: 3 (lower is better)
Translates to: LSCWIGNLQKMQ*QKSMLNCTMSM
Trigger: CATGCTCATGGTACAGTTCAACATGGACTTCTGTCACTGCATTTTCTGCAAATTGCCTATCCAGCAGCTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641885.1
3UTR-3UTR CAA 90 bp AGGGTGAGTGAAGAAAAATACAGGCTTTGCAGACTCCAGACAAAGTGCTTACAAAGGAATCTTGCTAGCTaGTCATACTTTAGGAGCATC +
Preference number: 3 (lower is better)
Translates to: RVSEEKYRLCRLQTKCLQRNLAS*SYFRSI
Trigger: GATGCTCCTAAAGTATGACAAGCTAGCAAGATTCCT...TTGTAAGCACTTTGTCTGGAGTCTGCAAAGCCTGTATTTTTCTTCACTCACCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641885.1
3UTR-3UTR CAA 90 bp GCATTCAATTGTTGTCAAGCTTCACAGCTTCCTAAACACGTAGAGGAAGATGAAGTATGTGGAAAATCATaGCTTCTCTGTCAGAGGCTA +
Preference number: 3 (lower is better)
Translates to: AFNCCQASQLPKHVEEDEVCGKS*LLCQRL
Trigger: TAGCCTCTGACAGAGAAGCAATGATTTTCCACATAC...TTCATCTTCCTCTACGTGTTTAGGAAGCTGTGAAGCTTGACAACAATTGAATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641885.1
3UTR-3UTR CAA 90 bp AACTTGAGGACTTCAGGGGTGGCTGGCGAAGTTCTATTTTGTGACTTGAAATGTAATCTCATTATTGACTaGCCTTATAGAGTTGTCTGC +
Preference number: 3 (lower is better)
Translates to: NLRTSGVAGEVLFCDLKCNLIID*PYRVVC
Trigger: GCAGACAACTCTATAAGGCAAGTCAATAATGAGATT...ACATTTCAAGTCACAAAATAGAACTTCGCCAGCCACCCCTGAAGTCCTCAAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641885.1
3UTR-3UTR CAA 90 bp AGGGTGAGTGAAGAAAAATACAGGCTTTGCAGACTCCAGACAAAGTGCTTACAAACATTGGAAGAAGAATaGTGTTGGGCCACACATAAA +
Preference number: 3 (lower is better)
Translates to: RVSEEKYRLCRLQTKCLQTLEEE*CWATHK
Trigger: TTTATGTGTGGCCCAACACAATTCTTCTTCCAATGT...TTGTAAGCACTTTGTCTGGAGTCTGCAAAGCCTGTATTTTTCTTCACTCACCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641885.1
3UTR-3UTR CAA 90 bp GCATTCAATTGTTGTCAAGCTTCACAGCTTCCTAAACACGTAGAGGAAGATGAATTCATATTTTCTGATTaGCAGAATTCTCCAGCCTCC +
Preference number: 3 (lower is better)
Translates to: AFNCCQASQLPKHVEEDEFIFSD*QNSPAS
Trigger: GGAGGCTGGAGAATTCTGCAAATCAGAAAATATGAA...TTCATCTTCCTCTACGTGTTTAGGAAGCTGTGAAGCTTGACAACAATTGAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641885.1
3UTR-3UTR CAA 90 bp AGGGTGAGTGAAGAAAAATACAGGCTTTGCAGACTCCAGACAAAGTGCTTACAACACTCAAAACCTAAATaGGCCTATTTGTATCCCTAT +
Preference number: 3 (lower is better)
Translates to: RVSEEKYRLCRLQTKCLQHSKPK*AYLYPY
Trigger: ATAGGGATACAAATAGGCCAATTTAGGTTTTGAGTG...TTGTAAGCACTTTGTCTGGAGTCTGCAAAGCCTGTATTTTTCTTCACTCACCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641885.1
3UTR-3UTR CAA 90 bp AGGGTGAGTGAAGAAAAATACAGGCTTTGCAGACTCCAGACAAAGTGCTTACAAAAGAGTGTCAGCATCTaGTCTAAGAGATATATCGAT +
Preference number: 3 (lower is better)
Translates to: RVSEEKYRLCRLQTKCLQKSVSI*SKRYID
Trigger: ATCGATATATCTCTTAGACAAGATGCTGACACTCTT...TTGTAAGCACTTTGTCTGGAGTCTGCAAAGCCTGTATTTTTCTTCACTCACCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641885.1
3UTR-3UTR CAA 90 bp GCCAATGAAATTACAGTACATAAATGTTTCAAAGAAACTTGCCAACACGCCAGATTCCTCTTTCAATACTaGCAATTCCAGTTAGTACCA +
Preference number: 3 (lower is better)
Translates to: ANEITVHKCFKETCQHARFLFQY*QFQLVP
Trigger: TGGTACTAACTGGAATTGCAAGTATTGAAAGAGGAA...TCTGGCGTGTTGGCAAGTTTCTTTGAAACATTTATGTACTGTAATTTCATTGGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641885.1
3UTR-3UTR CAA 90 bp GCCAATGAAATTACAGTACATAAATGTTTCAAAGAAACTTGCCAACACGCCAGAAACATATCTTTCCCTTaGTGGATACATGTTGGATCA +
Preference number: 3 (lower is better)
Translates to: ANEITVHKCFKETCQHARNISFP*WIHVGS
Trigger: TGATCCAACATGTATCCACAAAGGGAAAGATATGTT...TCTGGCGTGTTGGCAAGTTTCTTTGAAACATTTATGTACTGTAATTTCATTGGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641885.1
3UTR GCA 72 bp TGCTTTGATGATGAACTAAAAGTGGTTGGTAAAGATTaGTACACTTACGGCAATTTTATGGACGTCATTAAC +
Preference number: 3 (lower is better)
Translates to: CFDDELKVVGKD*YTYGNFMDVIN
Trigger: GTTAATGACGTCCATAAAATTGCCGTAAGTGTAGCAATCTTTACCAACCACTTTTAGTTCATCATCAAAGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641885.1
3UTR GCA 72 bp TACTATCAATCCAACTACTTAATCTCATTATTGACTTaGCTTATAGAGTTGTCTGCTGATCAGCTACACCTT +
Preference number: 3 (lower is better)
Translates to: YYQSNYLISLLT*LIELSADQLHL
Trigger: AAGGTGTAGCTGATCAGCAGACAACTCTATAAGGCAAGTCAATAATGAGATTAAGTAGTTGGATTGATAGTA
36% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641885.1
3UTR GCA 72 bp AATGAAATTACAGTACATAAATGTTTCAAAGAAACTTaGCAACACGCCAGAATTCAGAGAATAGGGTCTTCA +
Preference number: 3 (lower is better)
Translates to: NEITVHKCFKET*QHARIQRIGSS
Trigger: TGAAGACCCTATTCTCTGAATTCTGGCGTGTTGGCAAGTTTCTTTGAAACATTTATGTACTGTAATTTCATT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641885.1
CDS-3UTR CCA 90 bp GGTGTCCAAAGTTTTGGCTTCTCTGGGCCACATTGGAAGAAGAATTGTGTTGGGCTCTGGAAACTCTGGTaGCAGCTGGCACCATCCTTA +
Preference number: 4 (lower is better)
Translates to: GVQSFGFSGPHWKKNCVGLWKLW*QLAPSL
Trigger: TAAGGATGGTGCCAGCTGCCACCAGAGTTTCCAGAG...CCCAACACAATTCTTCTTCCAATGTGGCCCAGAGAAGCCAAAACTTTGGACACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641885.1
3UTR CAA 72 bp TGGAAACTCTGGTGGCAGCTGGCACCATCCTTACTATaGCTTAACGAGTCCATGGCCATGTCACTGCAGTTA +
Preference number: 4 (lower is better)
Translates to: WKLWWQLAPSLL*LNESMAMSLQL
Trigger: TAACTGCAGTGACATGGCCATGGACTCGTTAAGCAATAGTAAGGATGGTGCCAGCTGCCACCAGAGTTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641885.1
3UTR CAA 72 bp CATCTCCTGAGCCGCATGCAACCTGCAGGTCATGGGTaGGACAAGCTAGGCTTAAAGCTTATACAGTTTGAG +
Preference number: 4 (lower is better)
Translates to: HLLSRMQPAGHG*DKLGLKLIQFE
Trigger: CTCAAACTGTATAAGCTTTAAGCCTAGCTTGTCCAACCCATGACCTGCAGGTTGCATGCGGCTCAGGAGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641885.1
CDS-3UTR GCA 90 bp GCATTCAATTGTTGTCAAGCTTCACAGCTTCCTAAACACGTAGAGGAAGATGAACGGAGATCACGCTACTaGACTCCAGCCTGGGCGACA +
Preference number: 4 (lower is better)
Translates to: AFNCCQASQLPKHVEEDERRSRY*TPAWAT
Trigger: TGTCGCCCAGGCTGGAGTGCAGTAGCGTGATCTCCG...TTCATCTTCCTCTACGTGTTTAGGAAGCTGTGAAGCTTGACAACAATTGAATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641885.1
CDS-3UTR TCA 90 bp GGTGTCCAAAGTTTTGGCTTCTCTGGGCCACATTGGAAGAAGAATTGTGTTGGGATAGGAGAGTGTAGGTaGGGGTCCACTATAACTGTG +
Preference number: 4 (lower is better)
Translates to: GVQSFGFSGPHWKKNCVGIGECR*GSTITV
Trigger: CACAGTTATAGTGGACCCTCACCTACACTCTCCTAT...CCCAACACAATTCTTCTTCCAATGTGGCCCAGAGAAGCCAAAACTTTGGACACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641885.1
CDS-3UTR TCA 90 bp GGTGTCCAAAGTTTTGGCTTCTCTGGGCCACATTGGAAGAAGAATTGTGTTGGGGATCCTCTGGAAGAATaGTGCTTCACAGTAACCAGG +
Preference number: 4 (lower is better)
Translates to: GVQSFGFSGPHWKKNCVGDPLEE*CFTVTR
Trigger: CCTGGTTACTGTGAAGCATCATTCTTCCAGAGGATC...CCCAACACAATTCTTCTTCCAATGTGGCCCAGAGAAGCCAAAACTTTGGACACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641885.1
CDS-3UTR TCA 90 bp AACTTGAGGACTTCAGGGGTGGCTGGCGAAGTTCTATTTTGTGACTTGAAATGTGTGGCCACATGTAGATaGAGATGCATGGCCCAAAGA +
Preference number: 4 (lower is better)
Translates to: NLRTSGVAGEVLFCDLKCVATCR*RCMAQR
Trigger: TCTTTGGGCCATGCATCTTCATCTACATGTGGCCAC...ACATTTCAAGTCACAAAATAGAACTTCGCCAGCCACCCCTGAAGTCCTCAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641885.1
CDS-3UTR TCA 90 bp AACTTGAGGACTTCAGGGGTGGCTGGCGAAGTTCTATTTTGTGACTTGAAATGTGAGCATCTCACTAAGTaGCTCAGTTGCTCACTGTGG +
Preference number: 4 (lower is better)
Translates to: NLRTSGVAGEVLFCDLKCEHLTK*LSCSLW
Trigger: CCACAGTGAGCAACTGAGTCACTTAGTGAGATGCTC...ACATTTCAAGTCACAAAATAGAACTTCGCCAGCCACCCCTGAAGTCCTCAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641885.1
CDS-3UTR CCA 90 bp AGGGTGAGTGAAGAAAAATACAGGCTTTGCAGACTCCAGACAAAGTGCTTACAAGAGGGAAAGCAACTGTaGCAGCCATACCTGTGTCCA +
Preference number: 4 (lower is better)
Translates to: RVSEEKYRLCRLQTKCLQEGKQL*QPYLCP
Trigger: TGGACACAGGTATGGCTGCCACAGTTGCTTTCCCTC...TTGTAAGCACTTTGTCTGGAGTCTGCAAAGCCTGTATTTTTCTTCACTCACCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641885.1
3UTR CAA 72 bp TCTGCAGAGCCTTTTAATGCAGGGGTGTCCAAAGTTTaGGCTTCTCTGGGCCACATTGGAAGAAGAATTGTG +
Preference number: 4 (lower is better)
Translates to: SAEPFNAGVSKV*ASLGHIGRRIV
Trigger: CACAATTCTTCTTCCAATGTGGCCCAGAGAAGCCAAAACTTTGGACACCCCTGCATTAAAAGGCTCTGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641885.1
CDS-3UTR TCA 90 bp AACTTGAGGACTTCAGGGGTGGCTGGCGAAGTTCTATTTTGTGACTTGAAATGTACAGAATCTTGTCTGTaGGAAAGCTGCTTAGTGGCC +
Preference number: 4 (lower is better)
Translates to: NLRTSGVAGEVLFCDLKCTESCL*ESCLVA
Trigger: GGCCACTAAGCAGCTTTCTCACAGACAAGATTCTGT...ACATTTCAAGTCACAAAATAGAACTTCGCCAGCCACCCCTGAAGTCCTCAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641885.1
CDS-3UTR TCA 90 bp GGTGTCCAAAGTTTTGGCTTCTCTGGGCCACATTGGAAGAAGAATTGTGTTGGGTATGGTATGCTAGGGTaGGTGAAGAAAAATACAGGC +
Preference number: 4 (lower is better)
Translates to: GVQSFGFSGPHWKKNCVGYGMLG*VKKNTG
Trigger: GCCTGTATTTTTCTTCACTCACCCTAGCATACCATA...CCCAACACAATTCTTCTTCCAATGTGGCCCAGAGAAGCCAAAACTTTGGACACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641885.1
CDS-3UTR TCA 90 bp AGGGTGAGTGAAGAAAAATACAGGCTTTGCAGACTCCAGACAAAGTGCTTACAATCCATGTGTGAAATGTaGGGTGAGGAGGGCAGATCA +
Preference number: 4 (lower is better)
Translates to: RVSEEKYRLCRLQTKCLQSMCEM*GEEGRS
Trigger: TGATCTGCCCTCCTCACCTCACATTTCACACATGGA...TTGTAAGCACTTTGTCTGGAGTCTGCAAAGCCTGTATTTTTCTTCACTCACCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641885.1
CDS-3UTR CCA 90 bp AGGGTGAGTGAAGAAAAATACAGGCTTTGCAGACTCCAGACAAAGTGCTTACAAGGGTGTCCAAAGTTTTaGCTTCTCTGGGCCACATTG +
Preference number: 4 (lower is better)
Translates to: RVSEEKYRLCRLQTKCLQGCPKF*LLWATL
Trigger: CAATGTGGCCCAGAGAAGCCAAAACTTTGGACACCC...TTGTAAGCACTTTGTCTGGAGTCTGCAAAGCCTGTATTTTTCTTCACTCACCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641885.1
CDS-3UTR CCA 90 bp GGTGTCCAAAGTTTTGGCTTCTCTGGGCCACATTGGAAGAAGAATTGTGTTGGGCTTAGCGGATTTCATTaGCATCTGAGAGTACATGCA +
Preference number: 4 (lower is better)
Translates to: GVQSFGFSGPHWKKNCVGLSGFH*HLRVHA
Trigger: TGCATGTACTCTCAGATGCCAATGAAATCCGCTAAG...CCCAACACAATTCTTCTTCCAATGTGGCCCAGAGAAGCCAAAACTTTGGACACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641885.1
CDS-3UTR CCA 90 bp GGTGTCCAAAGTTTTGGCTTCTCTGGGCCACATTGGAAGAAGAATTGTGTTGGGCTCAGTTGCTCACTGTaGGTAATTGTCATTATCTCC +
Preference number: 4 (lower is better)
Translates to: GVQSFGFSGPHWKKNCVGLSCSL*VIVIIS
Trigger: GGAGATAATGACAATTACCCACAGTGAGCAACTGAG...CCCAACACAATTCTTCTTCCAATGTGGCCCAGAGAAGCCAAAACTTTGGACACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641885.1
CDS-3UTR TCA 90 bp AGGGTGAGTGAAGAAAAATACAGGCTTTGCAGACTCCAGACAAAGTGCTTACAAGATGATGATGAGATGTaGGGGAAAGCAACTGTGGCA +
Preference number: 4 (lower is better)
Translates to: RVSEEKYRLCRLQTKCLQDDDEM*GKATVA
Trigger: TGCCACAGTTGCTTTCCCTCACATCTCATCATCATC...TTGTAAGCACTTTGTCTGGAGTCTGCAAAGCCTGTATTTTTCTTCACTCACCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641885.1
CDS-3UTR CCA 90 bp AGGGTGAGTGAAGAAAAATACAGGCTTTGCAGACTCCAGACAAAGTGCTTACAAAGAGCAACACACACCTaGGGACTAATGACAGAAGCA +
Preference number: 4 (lower is better)
Translates to: RVSEEKYRLCRLQTKCLQRATHT*GLMTEA
Trigger: TGCTTCTGTCATTAGTCCCCAGGTGTGTGTTGCTCT...TTGTAAGCACTTTGTCTGGAGTCTGCAAAGCCTGTATTTTTCTTCACTCACCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641885.1
CDS-3UTR TCA 90 bp AGGGTGAGTGAAGAAAAATACAGGCTTTGCAGACTCCAGACAAAGTGCTTACAACCACATCCATTGTCTTaGTTCATAGGCAGAAGCCTT +
Preference number: 4 (lower is better)
Translates to: RVSEEKYRLCRLQTKCLQPHPLS*FIGRSL
Trigger: AAGGCTTCTGCCTATGAATCAAGACAATGGATGTGG...TTGTAAGCACTTTGTCTGGAGTCTGCAAAGCCTGTATTTTTCTTCACTCACCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641885.1
CDS-3UTR TCA 90 bp AACTTGAGGACTTCAGGGGTGGCTGGCGAAGTTCTATTTTGTGACTTGAAATGTGATCAGCTACACCTTTaGGGGTATTTTGGCAAATGT +
Preference number: 4 (lower is better)
Translates to: NLRTSGVAGEVLFCDLKCDQLHL*GYFGKC
Trigger: ACATTTGCCAAAATACCCTCAAAGGTGTAGCTGATC...ACATTTCAAGTCACAAAATAGAACTTCGCCAGCCACCCCTGAAGTCCTCAAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000641885.1
CDS-3UTR TCA 90 bp GGTGTCCAAAGTTTTGGCTTCTCTGGGCCACATTGGAAGAAGAATTGTGTTGGGATTAGATGCACCAAATaGGCTTTAGAAAGCACAAGT +
Preference number: 4 (lower is better)
Translates to: GVQSFGFSGPHWKKNCVGIRCTK*ALESTS
Trigger: ACTTGTGCTTTCTAAAGCTCATTTGGTGCATCTAAT...CCCAACACAATTCTTCTTCCAATGTGGCCCAGAGAAGCCAAAACTTTGGACACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641885.1
CDS-3UTR TCA 90 bp GCCAATGAAATTACAGTACATAAATGTTTCAAAGAAACTTGCCAACACGCCAGAAGGCAGAGTTTGCAATaGGCGGAGATCACGCTACTG +
Preference number: 4 (lower is better)
Translates to: ANEITVHKCFKETCQHARRQSLQ*AEITLL
Trigger: CAGTAGCGTGATCTCCGCTCATTGCAAACTCTGCCT...TCTGGCGTGTTGGCAAGTTTCTTTGAAACATTTATGTACTGTAATTTCATTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641885.1
CDS-3UTR GCA 90 bp AGGGTGAGTGAAGAAAAATACAGGCTTTGCAGACTCCAGACAAAGTGCTTACAACACCATCCTTACTATTaGTTAACGAGTCCATGGCCA +
Preference number: 4 (lower is better)
Translates to: RVSEEKYRLCRLQTKCLQHHPYY*LTSPWP
Trigger: TGGCCATGGACTCGTTAAGCAATAGTAAGGATGGTG...TTGTAAGCACTTTGTCTGGAGTCTGCAAAGCCTGTATTTTTCTTCACTCACCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641885.1
CDS-3UTR GCA 90 bp GGTGTCCAAAGTTTTGGCTTCTCTGGGCCACATTGGAAGAAGAATTGTGTTGGGCTTCGAGGAAATCCATaGAAAGGAGGAGTTATAAAA +
Preference number: 4 (lower is better)
Translates to: GVQSFGFSGPHWKKNCVGLRGNP*KGGVIK
Trigger: TTTTATAACTCCTCCTTTGCATGGATTTCCTCGAAG...CCCAACACAATTCTTCTTCCAATGTGGCCCAGAGAAGCCAAAACTTTGGACACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641885.1
CDS-3UTR CCA 90 bp AGGGTGAGTGAAGAAAAATACAGGCTTTGCAGACTCCAGACAAAGTGCTTACAAATAGGGATTAGGAAATaGGAGTGGGAAGGGCAAACA +
Preference number: 4 (lower is better)
Translates to: RVSEEKYRLCRLQTKCLQIGIRK*EWEGQT
Trigger: TGTTTGCCCTTCCCACTCCCATTTCCTAATCCCTAT...TTGTAAGCACTTTGTCTGGAGTCTGCAAAGCCTGTATTTTTCTTCACTCACCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641885.1
CDS-3UTR CCA 90 bp GGTGTCCAAAGTTTTGGCTTCTCTGGGCCACATTGGAAGAAGAATTGTGTTGGGGAAGAAGAATTGTGTTaGGCCACACATAAAATACAC +
Preference number: 4 (lower is better)
Translates to: GVQSFGFSGPHWKKNCVGEEELC*ATHKIH
Trigger: GTGTATTTTATGTGTGGCCCAACACAATTCTTCTTC...CCCAACACAATTCTTCTTCCAATGTGGCCCAGAGAAGCCAAAACTTTGGACACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000641885.1
CDS-3UTR CCA 90 bp AGGGTGAGTGAAGAAAAATACAGGCTTTGCAGACTCCAGACAAAGTGCTTACAATTCTCTGGGCCACATTaGAAGAAGAATTGTGTTGGG +
Preference number: 4 (lower is better)
Translates to: RVSEEKYRLCRLQTKCLQFSGPH*KKNCVG
Trigger: CCCAACACAATTCTTCTTCCAATGTGGCCCAGAGAA...TTGTAAGCACTTTGTCTGGAGTCTGCAAAGCCTGTATTTTTCTTCACTCACCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641885.1
CDS-3UTR CCA 90 bp GGTGTCCAAAGTTTTGGCTTCTCTGGGCCACATTGGAAGAAGAATTGTGTTGGGCCTCAAATAACTCTGTaGTGTAGAGACCACTATTAT +
Preference number: 4 (lower is better)
Translates to: GVQSFGFSGPHWKKNCVGPQITL*CRDHYY
Trigger: ATAATAGTGGTCTCTACACCACAGAGTTATTTGAGG...CCCAACACAATTCTTCTTCCAATGTGGCCCAGAGAAGCCAAAACTTTGGACACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641885.1
CDS-3UTR TCA 90 bp GCATTCAATTGTTGTCAAGCTTCACAGCTTCCTAAACACGTAGAGGAAGATGAAAGAAAGGGCCTTAGATaGTCCTCTGGAAGAATGATG +
Preference number: 4 (lower is better)
Translates to: AFNCCQASQLPKHVEEDERKGLR*SSGRMM
Trigger: CATCATTCTTCCAGAGGATCATCTAAGGCCCTTTCT...TTCATCTTCCTCTACGTGTTTAGGAAGCTGTGAAGCTTGACAACAATTGAATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641885.1
CDS-3UTR TCA 90 bp AACTTGAGGACTTCAGGGGTGGCTGGCGAAGTTCTATTTTGTGACTTGAAATGTGAATACATGAATCAATaGTCCCAGTCACATTTCCAG +
Preference number: 4 (lower is better)
Translates to: NLRTSGVAGEVLFCDLKCEYMNQ*SQSHFQ
Trigger: CTGGAAATGTGACTGGGATCATTGATTCATGTATTC...ACATTTCAAGTCACAAAATAGAACTTCGCCAGCCACCCCTGAAGTCCTCAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641885.1
CDS-3UTR GCA 90 bp GGTGTCCAAAGTTTTGGCTTCTCTGGGCCACATTGGAAGAAGAATTGTGTTGGGATTTTCATGGGAAAGTaGTCAAAGATCAGTCTCTTT +
Preference number: 4 (lower is better)
Translates to: GVQSFGFSGPHWKKNCVGIFMGK*SKISLF
Trigger: AAAGAGACTGATCTTTGAGCACTTTCCCATGAAAAT...CCCAACACAATTCTTCTTCCAATGTGGCCCAGAGAAGCCAAAACTTTGGACACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641885.1
CDS-3UTR GCA 90 bp GGTGTCCAAAGTTTTGGCTTCTCTGGGCCACATTGGAAGAAGAATTGTGTTGGGAACAGTTTTTCCATCTaGATTCAATTGTTGTCAAGC +
Preference number: 4 (lower is better)
Translates to: GVQSFGFSGPHWKKNCVGNSFSI*IQLLSS
Trigger: GCTTGACAACAATTGAATGCAGATGGAAAAACTGTT...CCCAACACAATTCTTCTTCCAATGTGGCCCAGAGAAGCCAAAACTTTGGACACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641885.1
CDS-3UTR GCA 90 bp GGTGTCCAAAGTTTTGGCTTCTCTGGGCCACATTGGAAGAAGAATTGTGTTGGGCTCCAGAATAATTTGTaGATATTTACCTCATGGTGT +
Preference number: 4 (lower is better)
Translates to: GVQSFGFSGPHWKKNCVGLQNNL*IFTSWC
Trigger: ACACCATGAGGTAAATATGCACAAATTATTCTGGAG...CCCAACACAATTCTTCTTCCAATGTGGCCCAGAGAAGCCAAAACTTTGGACACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641885.1
CDS-3UTR GCA 90 bp AACTTGAGGACTTCAGGGGTGGCTGGCGAAGTTCTATTTTGTGACTTGAAATGTAGGCTTTTTGCCTTTTaGCCTTACATCACATTACTG +
Preference number: 4 (lower is better)
Translates to: NLRTSGVAGEVLFCDLKCRLFAF*PYITLL
Trigger: CAGTAATGTGATGTAAGGGCAAAAGGCAAAAAGCCT...ACATTTCAAGTCACAAAATAGAACTTCGCCAGCCACCCCTGAAGTCCTCAAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000641885.1
CDS-3UTR CCA 90 bp GCCAATGAAATTACAGTACATAAATGTTTCAAAGAAACTTGCCAACACGCCAGATCCACACAAGCCAACTaGAACACCACAGGAAGGTCA +
Preference number: 4 (lower is better)
Translates to: ANEITVHKCFKETCQHARSTQAN*NTTGRS
Trigger: TGACCTTCCTGTGGTGTTCCAGTTGGCTTGTGTGGA...TCTGGCGTGTTGGCAAGTTTCTTTGAAACATTTATGTACTGTAATTTCATTGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641885.1
CDS-3UTR CCA 90 bp GGTGTCCAAAGTTTTGGCTTCTCTGGGCCACATTGGAAGAAGAATTGTGTTGGGCCTTTGAGGGTATTTTaGCAAATGTTCTTGAGTTTT +
Preference number: 4 (lower is better)
Translates to: GVQSFGFSGPHWKKNCVGPLRVF*QMFLSF
Trigger: AAAACTCAAGAACATTTGCCAAAATACCCTCAAAGG...CCCAACACAATTCTTCTTCCAATGTGGCCCAGAGAAGCCAAAACTTTGGACACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641885.1
CDS-3UTR CCA 90 bp GCATTCAATTGTTGTCAAGCTTCACAGCTTCCTAAACACGTAGAGGAAGATGAATGCTTAACGAGTCCATaGCCATGTCACTGCAGTTAT +
Preference number: 4 (lower is better)
Translates to: AFNCCQASQLPKHVEEDECLTSP*PCHCSY
Trigger: ATAACTGCAGTGACATGGCCATGGACTCGTTAAGCA...TTCATCTTCCTCTACGTGTTTAGGAAGCTGTGAAGCTTGACAACAATTGAATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641885.1
CDS-3UTR CCA 90 bp AGGGTGAGTGAAGAAAAATACAGGCTTTGCAGACTCCAGACAAAGTGCTTACAAAAGTTTTGGCTTCTCTaGGCCACATTGGAAGAAGAA +
Preference number: 4 (lower is better)
Translates to: RVSEEKYRLCRLQTKCLQKFWLL*ATLEEE
Trigger: TTCTTCTTCCAATGTGGCCCAGAGAAGCCAAAACTT...TTGTAAGCACTTTGTCTGGAGTCTGCAAAGCCTGTATTTTTCTTCACTCACCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000641885.1
CDS-3UTR TCA 90 bp GCATTCAATTGTTGTCAAGCTTCACAGCTTCCTAAACACGTAGAGGAAGATGAAGAGTTGTCATCGAGATaGACAAACTTGAGGACTTCA +
Preference number: 4 (lower is better)
Translates to: AFNCCQASQLPKHVEEDEELSSR*TNLRTS
Trigger: TGAAGTCCTCAAGTTTGTTCATCTCGATGACAACTC...TTCATCTTCCTCTACGTGTTTAGGAAGCTGTGAAGCTTGACAACAATTGAATGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641885.1
CDS-3UTR GCA 90 bp AGGGTGAGTGAAGAAAAATACAGGCTTTGCAGACTCCAGACAAAGTGCTTACAACACTCTTCTTATAAATaGTCCAGAACTCCCTCAGTT +
Preference number: 4 (lower is better)
Translates to: RVSEEKYRLCRLQTKCLQHSSYK*SRTPSV
Trigger: AACTGAGGGAGTTCTGGAGCATTTATAAGAAGAGTG...TTGTAAGCACTTTGTCTGGAGTCTGCAAAGCCTGTATTTTTCTTCACTCACCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641885.1
CDS-3UTR GCA 90 bp GCATTCAATTGTTGTCAAGCTTCACAGCTTCCTAAACACGTAGAGGAAGATGAAAGCAACCATCGTGTCTaGACAAAACAAAGTGTACTG +
Preference number: 4 (lower is better)
Translates to: AFNCCQASQLPKHVEEDESNHRV*TKQSVL
Trigger: CAGTACACTTTGTTTTGTGCAGACACGATGGTTGCT...TTCATCTTCCTCTACGTGTTTAGGAAGCTGTGAAGCTTGACAACAATTGAATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641885.1
CDS-3UTR CCA 90 bp GCCAATGAAATTACAGTACATAAATGTTTCAAAGAAACTTGCCAACACGCCAGACATTATCTCTGTCTCTaGAAACTCTGGTGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: ANEITVHKCFKETCQHARHYLCL*KLWWQL
Trigger: CAGCTGCCACCAGAGTTTCCAGAGACAGAGATAATG...TCTGGCGTGTTGGCAAGTTTCTTTGAAACATTTATGTACTGTAATTTCATTGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641885.1
CDS-3UTR CCA 90 bp AGGGTGAGTGAAGAAAAATACAGGCTTTGCAGACTCCAGACAAAGTGCTTACAAATTTTCTTTAACAGGTaGCAAGTGAGCAAAGGGAGA +
Preference number: 4 (lower is better)
Translates to: RVSEEKYRLCRLQTKCLQIFFNR*QVSKGR
Trigger: TCTCCCTTTGCTCACTTGCCACCTGTTAAAGAAAAT...TTGTAAGCACTTTGTCTGGAGTCTGCAAAGCCTGTATTTTTCTTCACTCACCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641885.1
CDS-3UTR TCA 90 bp GCCAATGAAATTACAGTACATAAATGTTTCAAAGAAACTTGCCAACACGCCAGACATAGGCAGAAGCCTTaGCTATTCTTTCCATCCTTC +
Preference number: 4 (lower is better)
Translates to: ANEITVHKCFKETCQHARHRQKP*LFFPSF
Trigger: GAAGGATGGAAAGAATAGTCAAGGCTTCTGCCTATG...TCTGGCGTGTTGGCAAGTTTCTTTGAAACATTTATGTACTGTAATTTCATTGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641885.1
CDS-3UTR TCA 90 bp GCCAATGAAATTACAGTACATAAATGTTTCAAAGAAACTTGCCAACACGCCAGATATAGAGTTGTCTGCTaGTCAGCTACACCTTTGAGG +
Preference number: 4 (lower is better)
Translates to: ANEITVHKCFKETCQHARYRVVC*SATPLR
Trigger: CCTCAAAGGTGTAGCTGATCAGCAGACAACTCTATA...TCTGGCGTGTTGGCAAGTTTCTTTGAAACATTTATGTACTGTAATTTCATTGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641885.1
CDS-3UTR TCA 90 bp GCATTCAATTGTTGTCAAGCTTCACAGCTTCCTAAACACGTAGAGGAAGATGAAGATTTCATTGGCATCTaGGAGTACATGCAAGAAGTT +
Preference number: 4 (lower is better)
Translates to: AFNCCQASQLPKHVEEDEDFIGI*EYMQEV
Trigger: AACTTCTTGCATGTACTCTCAGATGCCAATGAAATC...TTCATCTTCCTCTACGTGTTTAGGAAGCTGTGAAGCTTGACAACAATTGAATGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641885.1
CDS-3UTR TCA 90 bp GCATTCAATTGTTGTCAAGCTTCACAGCTTCCTAAACACGTAGAGGAAGATGAAAAATCTGGCTTTTGTTaGTGGCTTCAGATTCCTAGT +
Preference number: 4 (lower is better)
Translates to: AFNCCQASQLPKHVEEDEKSGFC*WLQIPS
Trigger: ACTAGGAATCTGAAGCCATCAACAAAAGCCAGATTT...TTCATCTTCCTCTACGTGTTTAGGAAGCTGTGAAGCTTGACAACAATTGAATGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641885.1
CDS-3UTR GCA 90 bp AGGGTGAGTGAAGAAAAATACAGGCTTTGCAGACTCCAGACAAAGTGCTTACAAAGCCAAGTTTCTCTGTaGAAAATAGATTCCACCAAT +
Preference number: 4 (lower is better)
Translates to: RVSEEKYRLCRLQTKCLQSQVSL*KIDSTN
Trigger: ATTGGTGGAATCTATTTTGCACAGAGAAACTTGGCT...TTGTAAGCACTTTGTCTGGAGTCTGCAAAGCCTGTATTTTTCTTCACTCACCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641885.1
CDS-3UTR TCA 90 bp GCATTCAATTGTTGTCAAGCTTCACAGCTTCCTAAACACGTAGAGGAAGATGAATATGACCTGACTCATTaGATGCATAACTCCCATAAT +
Preference number: 4 (lower is better)
Translates to: AFNCCQASQLPKHVEEDEYDLTH*MHNSHN
Trigger: ATTATGGGAGTTATGCATTCAATGAGTCAGGTCATA...TTCATCTTCCTCTACGTGTTTAGGAAGCTGTGAAGCTTGACAACAATTGAATGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641885.1
CDS-3UTR TCA 90 bp GCCAATGAAATTACAGTACATAAATGTTTCAAAGAAACTTGCCAACACGCCAGAAGCAGCATAATCCAGTaGTCACATTATCCTAAACCC +
Preference number: 4 (lower is better)
Translates to: ANEITVHKCFKETCQHARSSIIQ*SHYPKP
Trigger: GGGTTTAGGATAATGTGATCACTGGATTATGCTGCT...TCTGGCGTGTTGGCAAGTTTCTTTGAAACATTTATGTACTGTAATTTCATTGGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641885.1
CDS-3UTR TCA 90 bp GCCAATGAAATTACAGTACATAAATGTTTCAAAGAAACTTGCCAACACGCCAGATGCAAGAAGTTCACATaGATTAGATTTCCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: ANEITVHKCFKETCQHARCKKFT*IRFPWL
Trigger: CAGCCAGGGAAATCTAATTCATGTGAACTTCTTGCA...TCTGGCGTGTTGGCAAGTTTCTTTGAAACATTTATGTACTGTAATTTCATTGGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641885.1
CDS-3UTR GCA 90 bp AGGGTGAGTGAAGAAAAATACAGGCTTTGCAGACTCCAGACAAAGTGCTTACAAACTAATCTATCCATCTaGCTATCTCTTCACCTTAAT +
Preference number: 4 (lower is better)
Translates to: RVSEEKYRLCRLQTKCLQTNLSI*LSLHLN
Trigger: ATTAAGGTGAAGAGATAGGCAGATGGATAGATTAGT...TTGTAAGCACTTTGTCTGGAGTCTGCAAAGCCTGTATTTTTCTTCACTCACCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641885.1
CDS-3UTR GCA 90 bp GCCAATGAAATTACAGTACATAAATGTTTCAAAGAAACTTGCCAACACGCCAGAGAAAAATACAGGCTTTaGAGACTCCAGACAAAGTGC +
Preference number: 4 (lower is better)
Translates to: ANEITVHKCFKETCQHAREKYRL*RLQTKC
Trigger: GCACTTTGTCTGGAGTCTGCAAAGCCTGTATTTTTC...TCTGGCGTGTTGGCAAGTTTCTTTGAAACATTTATGTACTGTAATTTCATTGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641885.1
CDS-3UTR GCA 90 bp AGGGTGAGTGAAGAAAAATACAGGCTTTGCAGACTCCAGACAAAGTGCTTACAAATCTCATTATTGACTTaGCTTATAGAGTTGTCTGCT +
Preference number: 4 (lower is better)
Translates to: RVSEEKYRLCRLQTKCLQISLLT*LIELSA
Trigger: AGCAGACAACTCTATAAGGCAAGTCAATAATGAGAT...TTGTAAGCACTTTGTCTGGAGTCTGCAAAGCCTGTATTTTTCTTCACTCACCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641885.1
CDS-3UTR CCA 90 bp AGGGTGAGTGAAGAAAAATACAGGCTTTGCAGACTCCAGACAAAGTGCTTACAACAAAGTATAGATTATTaGGTTCAGAGTGGGAGTAAA +
Preference number: 4 (lower is better)
Translates to: RVSEEKYRLCRLQTKCLQQSIDY*VQSGSK
Trigger: TTTACTCCCACTCTGAACCCAATAATCTATACTTTG...TTGTAAGCACTTTGTCTGGAGTCTGCAAAGCCTGTATTTTTCTTCACTCACCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641885.1
3UTR CAA 72 bp TATGGAGTTCCTAAGGATTATAGGAATCTTGCTAGCTaGTCATACTTTAGGAGCATCTCACTAAGTGACTCA +
Preference number: 4 (lower is better)
Translates to: YGVPKDYRNLAS*SYFRSISLSDS
Trigger: TGAGTCACTTAGTGAGATGCTCCTAAAGTATGACAAGCTAGCAAGATTCCTATAATCCTTAGGAACTCCATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641885.1
CDS-3UTR GCA 90 bp GCATTCAATTGTTGTCAAGCTTCACAGCTTCCTAAACACGTAGAGGAAGATGAAAAAAAGCAATTGAGCTaGAAGAGAGGTATCTTTCTT +
Preference number: 4 (lower is better)
Translates to: AFNCCQASQLPKHVEEDEKKQLS*KRGIFL
Trigger: AAGAAAGATACCTCTCTTGCAGCTCAATTGCTTTTT...TTCATCTTCCTCTACGTGTTTAGGAAGCTGTGAAGCTTGACAACAATTGAATGC
38% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000641885.1
CDS-3UTR CCA 90 bp GCCAATGAAATTACAGTACATAAATGTTTCAAAGAAACTTGCCAACACGCCAGAATAGTGAAGTTTCGATaGACAGTTGTAGAGCTCTTG +
Preference number: 4 (lower is better)
Translates to: ANEITVHKCFKETCQHARIVKFR*TVVELL
Trigger: CAAGAGCTCTACAACTGTCCATCGAAACTTCACTAT...TCTGGCGTGTTGGCAAGTTTCTTTGAAACATTTATGTACTGTAATTTCATTGGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641885.1
CDS-3UTR CCA 90 bp GCATTCAATTGTTGTCAAGCTTCACAGCTTCCTAAACACGTAGAGGAAGATGAACTTATGAATTTGTGTTaGGCTGAATTTAAAGCCATC +
Preference number: 4 (lower is better)
Translates to: AFNCCQASQLPKHVEEDELMNLC*AEFKAI
Trigger: GATGGCTTTAAATTCAGCCCAACACAAATTCATAAG...TTCATCTTCCTCTACGTGTTTAGGAAGCTGTGAAGCTTGACAACAATTGAATGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641885.1
CDS-3UTR TCA 90 bp GCCAATGAAATTACAGTACATAAATGTTTCAAAGAAACTTGCCAACACGCCAGAAAGACAACAATGAAATaGGCTGTACAAGTAGAAAGG +
Preference number: 4 (lower is better)
Translates to: ANEITVHKCFKETCQHARKTTMK*AVQVER
Trigger: CCTTTCTACTTGTACAGCTCATTTCATTGTTGTCTT...TCTGGCGTGTTGGCAAGTTTCTTTGAAACATTTATGTACTGTAATTTCATTGGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641885.1
CDS-3UTR GCA 90 bp GCCAATGAAATTACAGTACATAAATGTTTCAAAGAAACTTGCCAACACGCCAGAAGACTCCAGACAAAGTaGTTACAAAGAGAGTCATTA +
Preference number: 4 (lower is better)
Translates to: ANEITVHKCFKETCQHARRLQTK*LQRESL
Trigger: TAATGACTCTCTTTGTAAGCACTTTGTCTGGAGTCT...TCTGGCGTGTTGGCAAGTTTCTTTGAAACATTTATGTACTGTAATTTCATTGGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641885.1
CDS-3UTR CCA 90 bp GCCAATGAAATTACAGTACATAAATGTTTCAAAGAAACTTGCCAACACGCCAGAATTAGGAAATGGGAGTaGGAAGGGCAAACATTTAAA +
Preference number: 4 (lower is better)
Translates to: ANEITVHKCFKETCQHARIRKWE*EGQTFK
Trigger: TTTAAATGTTTGCCCTTCCCACTCCCATTTCCTAAT...TCTGGCGTGTTGGCAAGTTTCTTTGAAACATTTATGTACTGTAATTTCATTGGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641885.1
CDS-3UTR CCA 90 bp GCCAATGAAATTACAGTACATAAATGTTTCAAAGAAACTTGCCAACACGCCAGACTTACGGCAATTTTATaGACGTCATTAACATTCGAA +
Preference number: 4 (lower is better)
Translates to: ANEITVHKCFKETCQHARLTAIL*TSLTFE
Trigger: TTCGAATGTTAATGACGTCCATAAAATTGCCGTAAG...TCTGGCGTGTTGGCAAGTTTCTTTGAAACATTTATGTACTGTAATTTCATTGGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641885.1
3UTR CAA 72 bp CAATTCCAGTTAGTACCAGCAGGTGGTAGTAATACTTaGTATACATTAAAGCTAATATTGAACCTACCAGAT +
Preference number: 4 (lower is better)
Translates to: QFQLVPAGGSNT*YTLKLILNLPD
Trigger: ATCTGGTAGGTTCAATATTAGCTTTAATGTATACAAAGTATTACTACCACCTGCTGGTACTAACTGGAATTG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641885.1
CDS-3UTR CAA 90 bp GGTGTCCAAAGTTTTGGCTTCTCTGGGCCACATTGGAAGAAGAATTGTGTTGGGGCACCATCCTTACTATaGCTTAACGAGTCCATGGCC +
Preference number: 5 (lower is better)
Translates to: GVQSFGFSGPHWKKNCVGAPSLL*LNESMA
Trigger: GGCCATGGACTCGTTAAGCAATAGTAAGGATGGTGC...CCCAACACAATTCTTCTTCCAATGTGGCCCAGAGAAGCCAAAACTTTGGACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641885.1
CDS-3UTR CAA 90 bp GGTGTCCAAAGTTTTGGCTTCTCTGGGCCACATTGGAAGAAGAATTGTGTTGGGGGCTGTTACCCACCATaGTTGCCACATAAAGCAATG +
Preference number: 5 (lower is better)
Translates to: GVQSFGFSGPHWKKNCVGGCYPP*LPHKAM
Trigger: CATTGCTTTATGTGGCAACAATGGTGGGTAACAGCC...CCCAACACAATTCTTCTTCCAATGTGGCCCAGAGAAGCCAAAACTTTGGACACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641885.1
CDS-3UTR CAA 90 bp GGTGTCCAAAGTTTTGGCTTCTCTGGGCCACATTGGAAGAAGAATTGTGTTGGGAGGAATCTTGCTAGCTaGTCATACTTTAGGAGCATC +
Preference number: 5 (lower is better)
Translates to: GVQSFGFSGPHWKKNCVGRNLAS*SYFRSI
Trigger: GATGCTCCTAAAGTATGACAAGCTAGCAAGATTCCT...CCCAACACAATTCTTCTTCCAATGTGGCCCAGAGAAGCCAAAACTTTGGACACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641885.1
CDS-3UTR CAA 90 bp AGGGTGAGTGAAGAAAAATACAGGCTTTGCAGACTCCAGACAAAGTGCTTACAACATTTCCAGTCTCATTaGAGTGTTGGTCCTACACGC +
Preference number: 5 (lower is better)
Translates to: RVSEEKYRLCRLQTKCLQHFQSH*SVGPTR
Trigger: GCGTGTAGGACCAACACTCAAATGAGACTGGAAATG...TTGTAAGCACTTTGTCTGGAGTCTGCAAAGCCTGTATTTTTCTTCACTCACCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641885.1
CDS-3UTR CAA 90 bp GGTGTCCAAAGTTTTGGCTTCTCTGGGCCACATTGGAAGAAGAATTGTGTTGGGTTCATATTTTCTGATTaGCAGAATTCTCCAGCCTCC +
Preference number: 5 (lower is better)
Translates to: GVQSFGFSGPHWKKNCVGFIFSD*QNSPAS
Trigger: GGAGGCTGGAGAATTCTGCAAATCAGAAAATATGAA...CCCAACACAATTCTTCTTCCAATGTGGCCCAGAGAAGCCAAAACTTTGGACACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641885.1
CDS-3UTR CAA 90 bp AACTTGAGGACTTCAGGGGTGGCTGGCGAAGTTCTATTTTGTGACTTGAAATGTGAAAAGGAAACAAAGTaGGTGAGGCCAAGTTTGAGT +
Preference number: 5 (lower is better)
Translates to: NLRTSGVAGEVLFCDLKCEKETK*VRPSLS
Trigger: ACTCAAACTTGGCCTCACCAACTTTGTTTCCTTTTC...ACATTTCAAGTCACAAAATAGAACTTCGCCAGCCACCCCTGAAGTCCTCAAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000641885.1
CDS-3UTR CAA 90 bp AACTTGAGGACTTCAGGGGTGGCTGGCGAAGTTCTATTTTGTGACTTGAAATGTAGAAAAATACAGGCTTaGCAGACTCCAGACAAAGTG +
Preference number: 5 (lower is better)
Translates to: NLRTSGVAGEVLFCDLKCRKIQA*QTPDKV
Trigger: CACTTTGTCTGGAGTCTGCAAAGCCTGTATTTTTCT...ACATTTCAAGTCACAAAATAGAACTTCGCCAGCCACCCCTGAAGTCCTCAAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000641885.1
CDS-3UTR CAA 90 bp GGTGTCCAAAGTTTTGGCTTCTCTGGGCCACATTGGAAGAAGAATTGTGTTGGGAAGAGTGTCAGCATCTaGTCTAAGAGATATATCGAT +
Preference number: 5 (lower is better)
Translates to: GVQSFGFSGPHWKKNCVGKSVSI*SKRYID
Trigger: ATCGATATATCTCTTAGACAAGATGCTGACACTCTT...CCCAACACAATTCTTCTTCCAATGTGGCCCAGAGAAGCCAAAACTTTGGACACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641885.1
CDS-3UTR CAA 90 bp AACTTGAGGACTTCAGGGGTGGCTGGCGAAGTTCTATTTTGTGACTTGAAATGTGTATGTGGAAAATCATaGCTTCTCTGTCAGAGGCTA +
Preference number: 5 (lower is better)
Translates to: NLRTSGVAGEVLFCDLKCVCGKS*LLCQRL
Trigger: TAGCCTCTGACAGAGAAGCAATGATTTTCCACATAC...ACATTTCAAGTCACAAAATAGAACTTCGCCAGCCACCCCTGAAGTCCTCAAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000641885.1
CDS-3UTR CAA 90 bp GGTGTCCAAAGTTTTGGCTTCTCTGGGCCACATTGGAAGAAGAATTGTGTTGGGTTCCTCTTTCAATACTaGCAATTCCAGTTAGTACCA +
Preference number: 5 (lower is better)
Translates to: GVQSFGFSGPHWKKNCVGFLFQY*QFQLVP
Trigger: TGGTACTAACTGGAATTGCAAGTATTGAAAGAGGAA...CCCAACACAATTCTTCTTCCAATGTGGCCCAGAGAAGCCAAAACTTTGGACACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641885.1
CDS-3UTR CAA 90 bp GCCAATGAAATTACAGTACATAAATGTTTCAAAGAAACTTGCCAACACGCCAGACCCACATCCATTGTCTaGATTCATAGGCAGAAGCCT +
Preference number: 5 (lower is better)
Translates to: ANEITVHKCFKETCQHARPTSIV*IHRQKP
Trigger: AGGCTTCTGCCTATGAATCAAGACAATGGATGTGGG...TCTGGCGTGTTGGCAAGTTTCTTTGAAACATTTATGTACTGTAATTTCATTGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641885.1
CDS-3UTR CAA 90 bp GCCAATGAAATTACAGTACATAAATGTTTCAAAGAAACTTGCCAACACGCCAGACTTCTCTGGGCCACATaGGAAGAAGAATTGTGTTGG +
Preference number: 5 (lower is better)
Translates to: ANEITVHKCFKETCQHARLLWAT*EEELCW
Trigger: CCAACACAATTCTTCTTCCAATGTGGCCCAGAGAAG...TCTGGCGTGTTGGCAAGTTTCTTTGAAACATTTATGTACTGTAATTTCATTGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641885.1
CDS-3UTR CAA 90 bp AGGGTGAGTGAAGAAAAATACAGGCTTTGCAGACTCCAGACAAAGTGCTTACAAACGCTCCAGAATAATTaGTGCATATTTACCTCATGG +
Preference number: 5 (lower is better)
Translates to: RVSEEKYRLCRLQTKCLQTLQNN*CIFTSW
Trigger: CCATGAGGTAAATATGCACAAATTATTCTGGAGCGT...TTGTAAGCACTTTGTCTGGAGTCTGCAAAGCCTGTATTTTTCTTCACTCACCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641885.1
CDS-3UTR CAA 90 bp GCATTCAATTGTTGTCAAGCTTCACAGCTTCCTAAACACGTAGAGGAAGATGAATTGGTGAGGCCAAGTTaGAGTGTGTATGGATGTATA +
Preference number: 5 (lower is better)
Translates to: AFNCCQASQLPKHVEEDELVRPS*SVYGCI
Trigger: TATACATCCATACACACTCAAACTTGGCCTCACCAA...TTCATCTTCCTCTACGTGTTTAGGAAGCTGTGAAGCTTGACAACAATTGAATGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641885.1
CDS-3UTR CAA 90 bp AACTTGAGGACTTCAGGGGTGGCTGGCGAAGTTCTATTTTGTGACTTGAAATGTCACTCAAAACCTAAATaGGCCTATTTGTATCCCTAT +
Preference number: 5 (lower is better)
Translates to: NLRTSGVAGEVLFCDLKCHSKPK*AYLYPY
Trigger: ATAGGGATACAAATAGGCCAATTTAGGTTTTGAGTG...ACATTTCAAGTCACAAAATAGAACTTCGCCAGCCACCCCTGAAGTCCTCAAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000641885.1
CDS-3UTR CAA 90 bp GCCAATGAAATTACAGTACATAAATGTTTCAAAGAAACTTGCCAACACGCCAGAGACATGGTAGACTTATaGCCCACATCCATTGTCTTG +
Preference number: 5 (lower is better)
Translates to: ANEITVHKCFKETCQHARDMVDL*PTSIVL
Trigger: CAAGACAATGGATGTGGGCAATAAGTCTACCATGTC...TCTGGCGTGTTGGCAAGTTTCTTTGAAACATTTATGTACTGTAATTTCATTGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641885.1
CDS-3UTR CAA 90 bp GCATTCAATTGTTGTCAAGCTTCACAGCTTCCTAAACACGTAGAGGAAGATGAATGTTACCCACCATTGTaGCCACATAAAGCAATGAAA +
Preference number: 5 (lower is better)
Translates to: AFNCCQASQLPKHVEEDECYPPL*PHKAMK
Trigger: TTTCATTGCTTTATGTGGCAACAATGGTGGGTAACA...TTCATCTTCCTCTACGTGTTTAGGAAGCTGTGAAGCTTGACAACAATTGAATGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641885.1
CDS-3UTR CAA 90 bp GCCAATGAAATTACAGTACATAAATGTTTCAAAGAAACTTGCCAACACGCCAGATCACTGCAGTTATCCTaGGTGAAAGAGTGTCAGCAT +
Preference number: 5 (lower is better)
Translates to: ANEITVHKCFKETCQHARSLQLS*VKECQH
Trigger: ATGCTGACACTCTTTCACCAAGGATAACTGCAGTGA...TCTGGCGTGTTGGCAAGTTTCTTTGAAACATTTATGTACTGTAATTTCATTGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641885.1
CDS-3UTR CAA 90 bp GCCAATGAAATTACAGTACATAAATGTTTCAAAGAAACTTGCCAACACGCCAGACCCTCAGTTGTGTTATaGCAGATAGTGCAGATCACT +
Preference number: 5 (lower is better)
Translates to: ANEITVHKCFKETCQHARPSVVL*QIVQIT
Trigger: AGTGATCTGCACTATCTGCAATAACACAACTGAGGG...TCTGGCGTGTTGGCAAGTTTCTTTGAAACATTTATGTACTGTAATTTCATTGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641885.1
CDS-3UTR CAA 90 bp GCATTCAATTGTTGTCAAGCTTCACAGCTTCCTAAACACGTAGAGGAAGATGAAACATTGGAAGAAGAATaGTGTTGGGCCACACATAAA +
Preference number: 5 (lower is better)
Translates to: AFNCCQASQLPKHVEEDETLEEE*CWATHK
Trigger: TTTATGTGTGGCCCAACACAATTCTTCTTCCAATGT...TTCATCTTCCTCTACGTGTTTAGGAAGCTGTGAAGCTTGACAACAATTGAATGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641885.1
CDS-3UTR CAA 90 bp GCCAATGAAATTACAGTACATAAATGTTTCAAAGAAACTTGCCAACACGCCAGAACTTGCCTTATAGAGTaGTCTGCTGATCAGCTACAC +
Preference number: 5 (lower is better)
Translates to: ANEITVHKCFKETCQHARTCLIE*SADQLH
Trigger: GTGTAGCTGATCAGCAGACAACTCTATAAGGCAAGT...TCTGGCGTGTTGGCAAGTTTCTTTGAAACATTTATGTACTGTAATTTCATTGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641885.1
CDS-3UTR CAA 90 bp GCCAATGAAATTACAGTACATAAATGTTTCAAAGAAACTTGCCAACACGCCAGATCCATCTGCATTCAATaGTTGTCAAGCTTCACAGCT +
Preference number: 5 (lower is better)
Translates to: ANEITVHKCFKETCQHARSICIQ*LSSFTA
Trigger: AGCTGTGAAGCTTGACAACAATTGAATGCAGATGGA...TCTGGCGTGTTGGCAAGTTTCTTTGAAACATTTATGTACTGTAATTTCATTGGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641885.1
CDS-3UTR CAA 90 bp GCCAATGAAATTACAGTACATAAATGTTTCAAAGAAACTTGCCAACACGCCAGACAAAATGCACTGAACTaGAGCCCTCACAAATTCTTG +
Preference number: 5 (lower is better)
Translates to: ANEITVHKCFKETCQHARQNALN*SPHKFL
Trigger: CAAGAATTTGTGAGGGCTCAAGTTCAGTGCATTTTG...TCTGGCGTGTTGGCAAGTTTCTTTGAAACATTTATGTACTGTAATTTCATTGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641885.1
CDS-3UTR CAA 90 bp GCATTCAATTGTTGTCAAGCTTCACAGCTTCCTAAACACGTAGAGGAAGATGAAAACATATCTTTCCCTTaGTGGATACATGTTGGATCA +
Preference number: 5 (lower is better)
Translates to: AFNCCQASQLPKHVEEDENISFP*WIHVGS
Trigger: TGATCCAACATGTATCCACAAAGGGAAAGATATGTT...TTCATCTTCCTCTACGTGTTTAGGAAGCTGTGAAGCTTGACAACAATTGAATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641885.1
CDS-3UTR CAA 90 bp GCCAATGAAATTACAGTACATAAATGTTTCAAAGAAACTTGCCAACACGCCAGAGACATACCTACCTATTaGTCCATCTATTCATCTGTG +
Preference number: 5 (lower is better)
Translates to: ANEITVHKCFKETCQHARDIPTY*SIYSSV
Trigger: CACAGATGAATAGATGGACAAATAGGTAGGTATGTC...TCTGGCGTGTTGGCAAGTTTCTTTGAAACATTTATGTACTGTAATTTCATTGGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641885.1
CDS TCA 90 bp GAAGTTTCGATGGACAGTTGTAGAGCTCTTGTAAATTTCCAGAGATaGACTGTTAAAGTATTCCCAGATAAAGTTTCCTGTTTGAAACTC +
Preference number: 5 (lower is better)
Translates to: EVSMDSCRALVNFQR*TVKVFPDKVSCLKL
Trigger: GAGTTTCAAACAGGAAACTTTATCTGGGAATACTTTAACAGTTCATCTCTGGAAATTTACAAGAGCTCTACAACTGTCCATCGAAACTTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641522.1
ENST00000641785.1
ENST00000641885.1
CDS TCA 72 bp GATACTAATGGCAATCCAACCAAGATAATATCATTCTaGACAGACATACCTACCTATTTGTCCATCTATTCA +
Preference number: 6 (lower is better)
Translates to: DTNGNPTKIISF*TDIPTYLSIYS
Trigger: TGAATAGATGGACAAATAGGTAGGTATGTCTGTTCAGAATGATATTATCTTGGTTGGATTGCCATTAGTATC
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641522.1
ENST00000641785.1
ENST00000641885.1