RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OR4K17 (Homo sapiens)

Ensembl gene IDs: ENSG00000176230

Ensembl transcript IDs: ENST00000641386.2, ENST00000641633.2

Found 249 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGGCCGCTCTGGCAATGTCTGTCTTACACGGCTGTAGATAAGGGATaGAATAAGCCCCAGTCTCCTGTAGTGTCCCCAGGCCTATTAGGG +
Preference number: 1 (lower is better)
Translates to: WPLWQCLSYTAVDKG*NKPQSPVVSPGLLG
Trigger: CCCTAATAGGCCTGGGGACACTACAGGAGACTGGGGCTTATTTCATCCCTTATCTACAGCCGTGTAAGACAGACATTGCCAGAGCGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR GCA 90 bp GTGGCTGGAGGAATCCCTCTTGGCACTGGGTCCAGCTTGAGAAACTaGTTGTGGTGGTTTTGGCATAAATGTCTGACGAGGGGTACCCTA +
Preference number: 1 (lower is better)
Translates to: VAGGIPLGTGSSLRN*LWWFWHKCLTRGTL
Trigger: TAGGGTACCCCTCGTCAGACATTTATGCCAAAACCACCACAAGCAGTTTCTCAAGCTGGACCCAGTGCCAAGAGGGATTCCTCCAGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR CCA 90 bp CAGAGTTGCAGTGGCTCTGAGTTTGAGGTAGAAACTAATTCTCTATaGTGGCTGAGCCGGTGCTCAGCACACAGTCACACAAGAAAACCA +
Preference number: 1 (lower is better)
Translates to: QSCSGSEFEVETNSL*WLSRCSAHSHTRKP
Trigger: TGGTTTTCTTGTGTGACTGTGTGCTGAGCACCGGCTCAGCCACCATAGAGAATTAGTTTCTACCTCAAACTCAGAGCCACTGCAACTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR CCA 90 bp AGCCATAAGCGCAGGTATGAATGGAGGTACTATAGATCTGTGGTTTaGGATAGTAATGGCAGCAGTATCTGGGCCCAGGAATTCCACTGC +
Preference number: 1 (lower is better)
Translates to: SHKRRYEWRYYRSVV*DSNGSSIWAQEFHC
Trigger: GCAGTGGAATTCCTGGGCCCAGATACTGCTGCCATTACTATCCCAAACCACAGATCTATAGTACCTCCATTCATACCTGCGCTTATGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR CCA 90 bp TCTGGAGCCATAAGCGCAGGTATGAATGGAGGTACTATAGATCTGTaGTTTGGGATAGTAATGGCAGCAGTATCTGGGCCCAGGAATTCC +
Preference number: 1 (lower is better)
Translates to: SGAISAGMNGGTIDL*FGIVMAAVSGPRNS
Trigger: GGAATTCCTGGGCCCAGATACTGCTGCCATTACTATCCCAAACCACAGATCTATAGTACCTCCATTCATACCTGCGCTTATGGCTCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR GCA 90 bp AACAGCGATGTTCAGGGAACAAGAGAGATAACCATTAGGTCTGACTaGCTGGGAGCTGGGTGGAACAGAGTCATATTTCTCTTCTTACAA +
Preference number: 1 (lower is better)
Translates to: NSDVQGTREITIRSD*LGAGWNRVIFLFLQ
Trigger: TTGTAAGAAGAGAAATATGACTCTGTTCCACCCAGCTCCCAGGCAGTCAGACCTAATGGTTATCTCTCTTGTTCCCTGAACATCGCTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR GCA 90 bp GTTTGGGATAGTAATGGCAGCAGTATCTGGGCCCAGGAATTCCACTaGCCAAACTATAATGGTATGCAAGGTGCAGGTGCTTTTGAAATA +
Preference number: 1 (lower is better)
Translates to: VWDSNGSSIWAQEFH*PNYNGMQGAGAFEI
Trigger: TATTTCAAAAGCACCTGCACCTTGCATACCATTATAGTTTGGGCAGTGGAATTCCTGGGCCCAGATACTGCTGCCATTACTATCCCAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR GCA 90 bp CCCTTTTGGTTTTTGGTGTTTCTTGTTGTCTTAAGCAGATTTCTGTaGATTTGTTGGAGCAGTCATCTCTTCCAGACTTCACAGGCTGGT +
Preference number: 1 (lower is better)
Translates to: PFWFLVFLVVLSRFL*ICWSSHLFQTSQAG
Trigger: ACCAGCCTGTGAAGTCTGGAAGAGATGACTGCTCCAACAAATGCACAGAAATCTGCTTAAGACAACAAGAAACACCAAAAACCAAAAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR CCA 90 bp TTTTTGGTGTTTCTTGTTGTCTTAAGCAGATTTCTGTGCATTTGTTaGAGCAGTCATCTCTTCCAGACTTCACAGGCTGGTTTCAGTACA +
Preference number: 1 (lower is better)
Translates to: FLVFLVVLSRFLCIC*SSHLFQTSQAGFST
Trigger: TGTACTGAAACCAGCCTGTGAAGTCTGGAAGAGATGACTGCTCCAACAAATGCACAGAAATCTGCTTAAGACAACAAGAAACACCAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR TCA 90 bp CTGGGAGCTGGGTGGAACAGAGTCATATTTCTCTTCTTACAAAAGTaGATAGGAGAAATATCGCTGAATTCTTTTTCTCAGCAAGGAATA +
Preference number: 1 (lower is better)
Translates to: LGAGWNRVIFLFLQK*IGEISLNSFSQQGI
Trigger: TATTCCTTGCTGAGAAAAAGAATTCAGCGATATTTCTCCTATTCACTTTTGTAAGAAGAGAAATATGACTCTGTTCCACCCAGCTCCCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR TCA 90 bp CTGTATGTTCTTGGACTTTACTGCACTTCCTTAAGACAATTATTGTaGAGTCTTTGTCTGGGAGTTCATAGGTCTCTGTTTCTTTGGAGA +
Preference number: 1 (lower is better)
Translates to: LYVLGLYCTSLRQLL*SLCLGVHRSLFLWR
Trigger: TCTCCAAAGAAACAGAGACCTATGAACTCCCAGACAAAGACTTCACAATAATTGTCTTAAGGAAGTGCAGTAAAGTCCAAGAACATACAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR CAA 90 bp AAACTCCTGACCTCAAGTCAGCCAAGGCAACCTGCCTTGGCTCTGTaGCGGGAAGTCAGGGACCCCGAACAGAGGGACCTGCTGAAGCCG +
Preference number: 2 (lower is better)
Translates to: KLLTSSQPRQPALAL*REVRDPEQRDLLKP
Trigger: CGGCTTCAGCAGGTCCCTCTGTTCGGGGTCCCTGACTTCCCGCAACAGAGCCAAGGCAGGTTGCCTTGGCTGACTTGAGGTCAGGAGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR CAA 90 bp GCTGGAGGAATCCCTCTTGGCACTGGGTCCAGCTTGAGAAACTGCTaGTGGTGGTTTTGGCATAAATGTCTGACGAGGGGTACCCTAGGG +
Preference number: 2 (lower is better)
Translates to: AGGIPLGTGSSLRNC*WWFWHKCLTRGTLG
Trigger: CCCTAGGGTACCCCTCGTCAGACATTTATGCCAAAACCACCACAAGCAGTTTCTCAAGCTGGACCCAGTGCCAAGAGGGATTCCTCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR CAA 90 bp GGGGATGTTGTGGCTGGAGGAATCCCTCTTGGCACTGGGTCCAGCTaGAGAAACTGCTTGTGGTGGTTTTGGCATAAATGTCTGACGAGG +
Preference number: 2 (lower is better)
Translates to: GDVVAGGIPLGTGSS*RNCLWWFWHKCLTR
Trigger: CCTCGTCAGACATTTATGCCAAAACCACCACAAGCAGTTTCTCAAGCTGGACCCAGTGCCAAGAGGGATTCCTCCAGCCACAACATCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR-3UTR GCA 90 bp GGTGCTTTTGAAATAGCTGGGGACCTTGTGACGGAAGTATGGGTAAGTGCAGAGTCAGCCAAGGCAACCTaGCTTGGCTCTGTTGCGGGA +
Preference number: 2 (lower is better)
Translates to: GAFEIAGDLVTEVWVSAESAKAT*LGSVAG
Trigger: TCCCGCAACAGAGCCAAGGCAGGTTGCCTTGGCTGA...CTCTGCACTTACCCATACTTCCGTCACAAGGTCCCCAGCTATTTCAAAAGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR-3UTR GCA 90 bp GGTGCTTTTGAAATAGCTGGGGACCTTGTGACGGAAGTATGGGTAAGTGCAGAGTGGTGGCTGAGCCGGTaGTCAGCACACAGTCACACA +
Preference number: 2 (lower is better)
Translates to: GAFEIAGDLVTEVWVSAEWWLSR*SAHSHT
Trigger: TGTGTGACTGTGTGCTGAGCACCGGCTCAGCCACCA...CTCTGCACTTACCCATACTTCCGTCACAAGGTCCCCAGCTATTTCAAAAGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR-3UTR TCA 90 bp GGTGCTTTTGAAATAGCTGGGGACCTTGTGACGGAAGTATGGGTAAGTGCAGAGCTGGTCTCAAACTCCTaGCCTCAAGTCAGCCAAGGC +
Preference number: 2 (lower is better)
Translates to: GAFEIAGDLVTEVWVSAELVSNS*PQVSQG
Trigger: GCCTTGGCTGACTTGAGGTCAGGAGTTTGAGACCAG...CTCTGCACTTACCCATACTTCCGTCACAAGGTCCCCAGCTATTTCAAAAGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR-3UTR TCA 90 bp GGTGCTTTTGAAATAGCTGGGGACCTTGTGACGGAAGTATGGGTAAGTGCAGAGATTCTCTATGGTGGCTaGGCCGGTGCTCAGCACACA +
Preference number: 2 (lower is better)
Translates to: GAFEIAGDLVTEVWVSAEILYGG*AGAQHT
Trigger: TGTGTGCTGAGCACCGGCTCAGCCACCATAGAGAAT...CTCTGCACTTACCCATACTTCCGTCACAAGGTCCCCAGCTATTTCAAAAGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR-3UTR CCA 90 bp GGTGCTTTTGAAATAGCTGGGGACCTTGTGACGGAAGTATGGGTAAGTGCAGAGTTAGGTCTGACTGCCTaGGAGCTGGGTGGAACAGAG +
Preference number: 2 (lower is better)
Translates to: GAFEIAGDLVTEVWVSAELGLTA*ELGGTE
Trigger: CTCTGTTCCACCCAGCTCCCAGGCAGTCAGACCTAA...CTCTGCACTTACCCATACTTCCGTCACAAGGTCCCCAGCTATTTCAAAAGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR-3UTR GCA 90 bp AAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTTTCTGCCTTGGCTCTGTTaGGGGAAGTCAGGGACCCCG +
Preference number: 2 (lower is better)
Translates to: KLLWSLVARAAKVLSISFLPWLC*GKSGTP
Trigger: CGGGGTCCCTGACTTCCCGCAACAGAGCCAAGGCAG...AAAAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR-3UTR GCA 90 bp GGTGCTTTTGAAATAGCTGGGGACCTTGTGACGGAAGTATGGGTAAGTGCAGAGTTCAAGCAATTCTCCTaGCTCAGCCTCCTGAATAGC +
Preference number: 2 (lower is better)
Translates to: GAFEIAGDLVTEVWVSAEFKQFS*LSLLNS
Trigger: GCTATTCAGGAGGCTGAGGCAGGAGAATTGCTTGAA...CTCTGCACTTACCCATACTTCCGTCACAAGGTCCCCAGCTATTTCAAAAGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR-3UTR TCA 90 bp AAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTTTCAGGCTGGAGGGCAGTaGCACAAACTCAGCTCACTG +
Preference number: 2 (lower is better)
Translates to: KLLWSLVARAAKVLSISFQAGGQ*HKLSSL
Trigger: CAGTGAGCTGAGTTTGTGTCACTGCCCTCCAGCCTG...AAAAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR-3UTR TCA 90 bp GGTGCTTTTGAAATAGCTGGGGACCTTGTGACGGAAGTATGGGTAAGTGCAGAGCCTCTGAAGGACAAGTaGGTCTCTGACACCTTTTAT +
Preference number: 2 (lower is better)
Translates to: GAFEIAGDLVTEVWVSAEPLKDK*VSDTFY
Trigger: ATAAAAGGTGTCAGAGACTCACTTGTCCTTCAGAGG...CTCTGCACTTACCCATACTTCCGTCACAAGGTCCCCAGCTATTTCAAAAGCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR-3UTR TCA 90 bp GGTGCTTTTGAAATAGCTGGGGACCTTGTGACGGAAGTATGGGTAAGTGCAGAGACAGAGAACCAAACATaGTCTCACAGTGAGTGCCAA +
Preference number: 2 (lower is better)
Translates to: GAFEIAGDLVTEVWVSAETENQT*SHSECQ
Trigger: TTGGCACTCACTGTGAGATCATGTTTGGTTCTCTGT...CTCTGCACTTACCCATACTTCCGTCACAAGGTCCCCAGCTATTTCAAAAGCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR-3UTR GCA 90 bp AAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTTTTCAGCCAAGGCAACCTaGCTTGGCTCTGTTGCGGGA +
Preference number: 2 (lower is better)
Translates to: KLLWSLVARAAKVLSISFSAKAT*LGSVAG
Trigger: TCCCGCAACAGAGCCAAGGCAGGTTGCCTTGGCTGA...AAAAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR CAA 90 bp GGTCCTGTGATCTTGCTCTGTCCCCATTTGCCTTGTGATATTTTATaGCCTTGTGATGCATGTGATCTCTGTGACCCACACCCTATTCGT +
Preference number: 2 (lower is better)
Translates to: GPVILLCPHLPCDIL*PCDACDLCDPHPIR
Trigger: ACGAATAGGGTGTGGGTCACAGAGATCACATGCATCACAAGGCAATAAAATATCACAAGGCAAATGGGGACAGAGCAAGATCACAGGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR-3UTR TCA 90 bp AAAAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTCTGGTCTCAAACTCCTaGCCTCAAGTCAGCCAAGGC +
Preference number: 2 (lower is better)
Translates to: KNCCGLWWLGLLKSFLSLLVSNS*PQVSQG
Trigger: GCCTTGGCTGACTTGAGGTCAGGAGTTTGAGACCAG...AAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR-3UTR TCA 90 bp AAAAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTATTCTCTATGGTGGCTaGGCCGGTGCTCAGCACACA +
Preference number: 2 (lower is better)
Translates to: KNCCGLWWLGLLKSFLSLILYGG*AGAQHT
Trigger: TGTGTGCTGAGCACCGGCTCAGCCACCATAGAGAAT...AAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR-3UTR TCA 90 bp AAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTTTGCACTGGGTCCAGCTTaGGAAACTGCTTGTGGTGGT +
Preference number: 2 (lower is better)
Translates to: KLLWSLVARAAKVLSISFALGPA*ETACGG
Trigger: ACCACCACAAGCAGTTTCTCAAGCTGGACCCAGTGC...AAAAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR-3UTR GCA 90 bp AAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTTTACCATTAGGTCTGACTaGCTGGGAGCTGGGTGGAAC +
Preference number: 2 (lower is better)
Translates to: KLLWSLVARAAKVLSISFTIRSD*LGAGWN
Trigger: GTTCCACCCAGCTCCCAGGCAGTCAGACCTAATGGT...AAAAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR-3UTR CCA 90 bp AAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTTTCCACTGGGGATGTTGTaGCTGGAGGAATCCCTCTTG +
Preference number: 2 (lower is better)
Translates to: KLLWSLVARAAKVLSISFPLGML*LEESLL
Trigger: CAAGAGGGATTCCTCCAGCCACAACATCCCCAGTGG...AAAAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR-3UTR TCA 90 bp CTTCTTACAAAAGTGAATAGGAGAAATATCGCTGAATTCTTTTTCTCAGCAAGGGAACCCGCTGACATGTaGTGTCTCCCCTGGACACCC +
Preference number: 2 (lower is better)
Translates to: LLTKVNRRNIAEFFFSAREPADM*CLPWTP
Trigger: GGGTGTCCAGGGGAGACATCACATGTCAGCGGGTTC...CCTTGCTGAGAAAAAGAATTCAGCGATATTTCTCCTATTCACTTTTGTAAGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR-3UTR CCA 90 bp AAAAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTAATGGCAGCAGTATCTaGGCCCAGGAATTCCACTGC +
Preference number: 2 (lower is better)
Translates to: KNCCGLWWLGLLKSFLSLNGSSI*AQEFHC
Trigger: GCAGTGGAATTCCTGGGCCCAGATACTGCTGCCATT...AAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR-3UTR CCA 90 bp AAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTTTAATGGCAGCAGTATCTaGGCCCAGGAATTCCACTGC +
Preference number: 2 (lower is better)
Translates to: KLLWSLVARAAKVLSISFNGSSI*AQEFHC
Trigger: GCAGTGGAATTCCTGGGCCCAGATACTGCTGCCATT...AAAAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR-3UTR TCA 90 bp GGTGCTTTTGAAATAGCTGGGGACCTTGTGACGGAAGTATGGGTAAGTGCAGAGCTCTTCTTACAAAAGTaGATAGGAGAAATATCGCTG +
Preference number: 2 (lower is better)
Translates to: GAFEIAGDLVTEVWVSAELFLQK*IGEISL
Trigger: CAGCGATATTTCTCCTATTCACTTTTGTAAGAAGAG...CTCTGCACTTACCCATACTTCCGTCACAAGGTCCCCAGCTATTTCAAAAGCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR-3UTR TCA 90 bp GGTGCTTTTGAAATAGCTGGGGACCTTGTGACGGAAGTATGGGTAAGTGCAGAGGAAATCTGGGCACTTTaGAAAAAGAACAGGATAACA +
Preference number: 2 (lower is better)
Translates to: GAFEIAGDLVTEVWVSAEEIWAL*KKNRIT
Trigger: TGTTATCCTGTTCTTTTTTCAAAGTGCCCAGATTTC...CTCTGCACTTACCCATACTTCCGTCACAAGGTCCCCAGCTATTTCAAAAGCACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR-3UTR TCA 90 bp GGTGCTTTTGAAATAGCTGGGGACCTTGTGACGGAAGTATGGGTAAGTGCAGAGAACATGATCTCACAGTaGGTGCCAAATCATTTAACT +
Preference number: 2 (lower is better)
Translates to: GAFEIAGDLVTEVWVSAENMISQ*VPNHLT
Trigger: AGTTAAATGATTTGGCACTCACTGTGAGATCATGTT...CTCTGCACTTACCCATACTTCCGTCACAAGGTCCCCAGCTATTTCAAAAGCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR-3UTR GCA 90 bp AAAAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTGGAAGTATGGGTAAGTaGAGAGTTGCAGTGGCTCTG +
Preference number: 2 (lower is better)
Translates to: KNCCGLWWLGLLKSFLSLGSMGK*RVAVAL
Trigger: CAGAGCCACTGCAACTCTGCACTTACCCATACTTCC...AAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR-3UTR CCA 90 bp AAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTTTTGCCTGGGAGCTGGGTaGAACAGAGTCATATTTCTC +
Preference number: 2 (lower is better)
Translates to: KLLWSLVARAAKVLSISFCLGAG*NRVIFL
Trigger: GAGAAATATGACTCTGTTCCACCCAGCTCCCAGGCA...AAAAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR-3UTR CCA 90 bp AAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTTTAATCCCTCTTGGCACTaGGTCCAGCTTGAGAAACTG +
Preference number: 2 (lower is better)
Translates to: KLLWSLVARAAKVLSISFNPSWH*VQLEKL
Trigger: CAGTTTCTCAAGCTGGACCCAGTGCCAAGAGGGATT...AAAAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR-3UTR GCA 90 bp GGTGCTTTTGAAATAGCTGGGGACCTTGTGACGGAAGTATGGGTAAGTGCAGAGCTTGTGATATTTTATTaGCTTGTGATGCATGTGATC +
Preference number: 2 (lower is better)
Translates to: GAFEIAGDLVTEVWVSAELVIFY*LVMHVI
Trigger: GATCACATGCATCACAAGGCAATAAAATATCACAAG...CTCTGCACTTACCCATACTTCCGTCACAAGGTCCCCAGCTATTTCAAAAGCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR-3UTR CCA 90 bp AAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTTTGAAACTAATTCTCTATaGTGGCTGAGCCGGTGCTCA +
Preference number: 2 (lower is better)
Translates to: KLLWSLVARAAKVLSISFETNSL*WLSRCS
Trigger: TGAGCACCGGCTCAGCCACCATAGAGAATTAGTTTC...AAAAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR CAA 90 bp GTTTTTGGTGTTTCTTGTTGTCTTAAGCAGATTTCTGTGCATTTGTaGGAGCAGTCATCTCTTCCAGACTTCACAGGCTGGTTTCAGTAC +
Preference number: 2 (lower is better)
Translates to: VFGVSCCLKQISVHL*EQSSLPDFTGWFQY
Trigger: GTACTGAAACCAGCCTGTGAAGTCTGGAAGAGATGACTGCTCCAACAAATGCACAGAAATCTGCTTAAGACAACAAGAAACACCAAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR-3UTR TCA 90 bp AAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTTTCCTCTGAAGGACAAGTaGGTCTCTGACACCTTTTAT +
Preference number: 2 (lower is better)
Translates to: KLLWSLVARAAKVLSISFPLKDK*VSDTFY
Trigger: ATAAAAGGTGTCAGAGACTCACTTGTCCTTCAGAGG...AAAAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR-3UTR CCA 90 bp AAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTTTCCTATGTTGAAATATTaGGGGCTGGTTCCCCTGATA +
Preference number: 2 (lower is better)
Translates to: KLLWSLVARAAKVLSISFPMLKY*GLVPLI
Trigger: TATCAGGGGAACCAGCCCCCAATATTTCAACATAGG...AAAAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR-3UTR TCA 90 bp AAAAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTATCATCTTCTTAAGCTaGGGATGTATGTTGCCTCAG +
Preference number: 2 (lower is better)
Translates to: KNCCGLWWLGLLKSFLSLIIFLS*GCMLPQ
Trigger: CTGAGGCAACATACATCCTCAGCTTAAGAAGATGAT...AAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR-3UTR CCA 90 bp AAAAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTAAGCGCAGGTATGAATaGAGGTACTATAGATCTGTG +
Preference number: 2 (lower is better)
Translates to: KNCCGLWWLGLLKSFLSLKRRYE*RYYRSV
Trigger: CACAGATCTATAGTACCTCCATTCATACCTGCGCTT...AAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR-3UTR GCA 90 bp AAAAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTTCCATAATAAAAACTTaGTGGTTTTGCAGCTTGGGG +
Preference number: 2 (lower is better)
Translates to: KNCCGLWWLGLLKSFLSLSIIKT*WFCSLG
Trigger: CCCCAAGCTGCAAAACCAGCAAGTTTTTATTATGGA...AAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR-3UTR GCA 90 bp AAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTTTTCCATAATAAAAACTTaGTGGTTTTGCAGCTTGGGG +
Preference number: 2 (lower is better)
Translates to: KLLWSLVARAAKVLSISFSIIKT*WFCSLG
Trigger: CCCCAAGCTGCAAAACCAGCAAGTTTTTATTATGGA...AAAAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR-3UTR GCA 90 bp AAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTTTCAAACTATAATGGTATaGAAGGTGCAGGTGCTTTTG +
Preference number: 2 (lower is better)
Translates to: KLLWSLVARAAKVLSISFQTIMV*KVQVLL
Trigger: CAAAAGCACCTGCACCTTGCATACCATTATAGTTTG...AAAAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR-3UTR CCA 90 bp AAAAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTTATAGATCTGTGGTTTaGGATAGTAATGGCAGCAGT +
Preference number: 2 (lower is better)
Translates to: KNCCGLWWLGLLKSFLSLYRSVV*DSNGSS
Trigger: ACTGCTGCCATTACTATCCCAAACCACAGATCTATA...AAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR-3UTR CCA 90 bp AAAAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTGGTACTATAGATCTGTaGTTTGGGATAGTAATGGCA +
Preference number: 2 (lower is better)
Translates to: KNCCGLWWLGLLKSFLSLGTIDL*FGIVMA
Trigger: TGCCATTACTATCCCAAACCACAGATCTATAGTACC...AAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR-3UTR CCA 90 bp AAAAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTAGAAACTGCTTGTGGTaGTTTTGGCATAAATGTCTG +
Preference number: 2 (lower is better)
Translates to: KNCCGLWWLGLLKSFLSLRNCLW*FWHKCL
Trigger: CAGACATTTATGCCAAAACCACCACAAGCAGTTTCT...AAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR-3UTR TCA 90 bp AAAAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTGAAATCTGGGCACTTTaGAAAAAGAACAGGATAACA +
Preference number: 2 (lower is better)
Translates to: KNCCGLWWLGLLKSFLSLEIWAL*KKNRIT
Trigger: TGTTATCCTGTTCTTTTTTCAAAGTGCCCAGATTTC...AAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR-3UTR TCA 90 bp AAAAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTCAATCAATACTCTTGTaGTTTCCTATGCCTGTCTTT +
Preference number: 2 (lower is better)
Translates to: KNCCGLWWLGLLKSFLSLQSILL*FPMPVF
Trigger: AAAGACAGGCATAGGAAATCACAAGAGTATTGATTG...AAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR-3UTR TCA 90 bp AAAAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTAACATGATCTCACAGTaGGTGCCAAATCATTTAACT +
Preference number: 2 (lower is better)
Translates to: KNCCGLWWLGLLKSFLSLNMISQ*VPNHLT
Trigger: AGTTAAATGATTTGGCACTCACTGTGAGATCATGTT...AAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR-3UTR CCA 90 bp CTTCTTACAAAAGTGAATAGGAGAAATATCGCTGAATTCTTTTTCTCAGCAAGGCCTATGTTGAAATATTaGGGGCTGGTTCCCCTGATA +
Preference number: 2 (lower is better)
Translates to: LLTKVNRRNIAEFFFSARPMLKY*GLVPLI
Trigger: TATCAGGGGAACCAGCCCCCAATATTTCAACATAGG...CCTTGCTGAGAAAAAGAATTCAGCGATATTTCTCCTATTCACTTTTGTAAGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR-3UTR GCA 90 bp CTTCTTACAAAAGTGAATAGGAGAAATATCGCTGAATTCTTTTTCTCAGCAAGGTGCTCTGTCCCCATTTaGCTTGTGATATTTTATTGC +
Preference number: 2 (lower is better)
Translates to: LLTKVNRRNIAEFFFSARCSVPI*LVIFYC
Trigger: GCAATAAAATATCACAAGGCAAATGGGGACAGAGCA...CCTTGCTGAGAAAAAGAATTCAGCGATATTTCTCCTATTCACTTTTGTAAGAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR-3UTR GCA 90 bp CTTCTTACAAAAGTGAATAGGAGAAATATCGCTGAATTCTTTTTCTCAGCAAGGCTTGTGATATTTTATTaGCTTGTGATGCATGTGATC +
Preference number: 2 (lower is better)
Translates to: LLTKVNRRNIAEFFFSARLVIFY*LVMHVI
Trigger: GATCACATGCATCACAAGGCAATAAAATATCACAAG...CCTTGCTGAGAAAAAGAATTCAGCGATATTTCTCCTATTCACTTTTGTAAGAAG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR GCA 72 bp TCTCAAACTCCTGACCTCAAGTCAGCCAAGGCAACCTaGCTTGGCTCTGTTGCGGGAAGTCAGGGACCCCGA +
Preference number: 3 (lower is better)
Translates to: SQTPDLKSAKAT*LGSVAGSQGPR
Trigger: TCGGGGTCCCTGACTTCCCGCAACAGAGCCAAGGCAGGTTGCCTTGGCTGACTTGAGGTCAGGAGTTTGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR-3UTR CAA 90 bp GGTGCTTTTGAAATAGCTGGGGACCTTGTGACGGAAGTATGGGTAAGTGCAGAGCCTGCCTTGGCTCTGTaGCGGGAAGTCAGGGACCCC +
Preference number: 3 (lower is better)
Translates to: GAFEIAGDLVTEVWVSAEPALAL*REVRDP
Trigger: GGGGTCCCTGACTTCCCGCAACAGAGCCAAGGCAGG...CTCTGCACTTACCCATACTTCCGTCACAAGGTCCCCAGCTATTTCAAAAGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR CCA 72 bp TCCCACTGGGGATGTTGTGGCTGGAGGAATCCCTCTTaGCACTGGGTCCAGCTTGAGAAACTGCTTGTGGTG +
Preference number: 3 (lower is better)
Translates to: SHWGCCGWRNPS*HWVQLEKLLVV
Trigger: CACCACAAGCAGTTTCTCAAGCTGGACCCAGTGCCAAGAGGGATTCCTCCAGCCACAACATCCCCAGTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR-3UTR CAA 90 bp GGTGCTTTTGAAATAGCTGGGGACCTTGTGACGGAAGTATGGGTAAGTGCAGAGCCAAGGCAACCTGCCTaGGCTCTGTTGCGGGAAGTC +
Preference number: 3 (lower is better)
Translates to: GAFEIAGDLVTEVWVSAEPRQPA*ALLREV
Trigger: GACTTCCCGCAACAGAGCCAAGGCAGGTTGCCTTGG...CTCTGCACTTACCCATACTTCCGTCACAAGGTCCCCAGCTATTTCAAAAGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR CCA 72 bp CCTCTTGGCACTGGGTCCAGCTTGAGAAACTGCTTGTaGTGGTTTTGGCATAAATGTCTGACGAGGGGTACC +
Preference number: 3 (lower is better)
Translates to: PLGTGSSLRNCL*WFWHKCLTRGT
Trigger: GGTACCCCTCGTCAGACATTTATGCCAAAACCACCACAAGCAGTTTCTCAAGCTGGACCCAGTGCCAAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR-3UTR CAA 90 bp GGTGCTTTTGAAATAGCTGGGGACCTTGTGACGGAAGTATGGGTAAGTGCAGAGCCTGGTCCTGTGATCTaGCTCTGTCCCCATTTGCCT +
Preference number: 3 (lower is better)
Translates to: GAFEIAGDLVTEVWVSAEPGPVI*LCPHLP
Trigger: AGGCAAATGGGGACAGAGCAAGATCACAGGACCAGG...CTCTGCACTTACCCATACTTCCGTCACAAGGTCCCCAGCTATTTCAAAAGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR-3UTR CAA 90 bp AAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTTTCCTGCCTTGGCTCTGTaGCGGGAAGTCAGGGACCCC +
Preference number: 3 (lower is better)
Translates to: KLLWSLVARAAKVLSISFPALAL*REVRDP
Trigger: GGGGTCCCTGACTTCCCGCAACAGAGCCAAGGCAGG...AAAAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR TCA 72 bp TGGCAATGTCTGTCTTACACGGCTGTAGATAAGGGATaGAATAAGCCCCAGTCTCCTGTAGTGTCCCCAGGC +
Preference number: 3 (lower is better)
Translates to: WQCLSYTAVDKG*NKPQSPVVSPG
Trigger: GCCTGGGGACACTACAGGAGACTGGGGCTTATTTCATCCCTTATCTACAGCCGTGTAAGACAGACATTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR GCA 72 bp GGAATCCCTCTTGGCACTGGGTCCAGCTTGAGAAACTaGTTGTGGTGGTTTTGGCATAAATGTCTGACGAGG +
Preference number: 3 (lower is better)
Translates to: GIPLGTGSSLRN*LWWFWHKCLTR
Trigger: CCTCGTCAGACATTTATGCCAAAACCACCACAAGCAGTTTCTCAAGCTGGACCCAGTGCCAAGAGGGATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR CCA 72 bp TGCATTCCTAGGGGGAGGTCTCTAAAATGGCCGCTCTaGCAATGTCTGTCTTACACGGCTGTAGATAAGGGA +
Preference number: 3 (lower is better)
Translates to: CIPRGRSLKWPL*QCLSYTAVDKG
Trigger: TCCCTTATCTACAGCCGTGTAAGACAGACATTGCCAGAGCGGCCATTTTAGAGACCTCCCCCTAGGAATGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR CCA 72 bp GAAGGAGAATGCATTCCTAGGGGGAGGTCTCTAAAATaGCCGCTCTGGCAATGTCTGTCTTACACGGCTGTA +
Preference number: 3 (lower is better)
Translates to: EGECIPRGRSLK*PLWQCLSYTAV
Trigger: TACAGCCGTGTAAGACAGACATTGCCAGAGCGGCCATTTTAGAGACCTCCCCCTAGGAATGCATTCTCCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR GCA 72 bp AGTAATGGCAGCAGTATCTGGGCCCAGGAATTCCACTaGCCAAACTATAATGGTATGCAAGGTGCAGGTGCT +
Preference number: 3 (lower is better)
Translates to: SNGSSIWAQEFH*PNYNGMQGAGA
Trigger: AGCACCTGCACCTTGCATACCATTATAGTTTGGGCAGTGGAATTCCTGGGCCCAGATACTGCTGCCATTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR CCA 72 bp AGTGGCTCTGAGTTTGAGGTAGAAACTAATTCTCTATaGTGGCTGAGCCGGTGCTCAGCACACAGTCACACA +
Preference number: 3 (lower is better)
Translates to: SGSEFEVETNSL*WLSRCSAHSHT
Trigger: TGTGTGACTGTGTGCTGAGCACCGGCTCAGCCACCATAGAGAATTAGTTTCTACCTCAAACTCAGAGCCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR-3UTR CAA 90 bp AAAAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTCCAAGGCAACCTGCCTaGGCTCTGTTGCGGGAAGTC +
Preference number: 3 (lower is better)
Translates to: KNCCGLWWLGLLKSFLSLPRQPA*ALLREV
Trigger: GACTTCCCGCAACAGAGCCAAGGCAGGTTGCCTTGG...AAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR TCA 72 bp GTCAGGGACCCCGAACAGAGGGACCTGCTGAAGCCGTaGCAGAAGAACATAAATTTTGAAGATTTCATGGAC +
Preference number: 3 (lower is better)
Translates to: VRDPEQRDLLKP*QKNINFEDFMD
Trigger: GTCCATGAAATCTTCAAAATTTATGTTCTTCTGTCACGGCTTCAGCAGGTCCCTCTGTTCGGGGTCCCTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR GCA 72 bp GTTCAGGGAACAAGAGAGATAACCATTAGGTCTGACTaGCTGGGAGCTGGGTGGAACAGAGTCATATTTCTC +
Preference number: 3 (lower is better)
Translates to: VQGTREITIRSD*LGAGWNRVIFL
Trigger: GAGAAATATGACTCTGTTCCACCCAGCTCCCAGGCAGTCAGACCTAATGGTTATCTCTCTTGTTCCCTGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR-3UTR CAA 90 bp AAAAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTGGCACTGGGTCCAGCTaGAGAAACTGCTTGTGGTGG +
Preference number: 3 (lower is better)
Translates to: KNCCGLWWLGLLKSFLSLGTGSS*RNCLWW
Trigger: CCACCACAAGCAGTTTCTCAAGCTGGACCCAGTGCC...AAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR-3UTR CAA 90 bp AAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTTTGGCACTGGGTCCAGCTaGAGAAACTGCTTGTGGTGG +
Preference number: 3 (lower is better)
Translates to: KLLWSLVARAAKVLSISFGTGSS*RNCLWW
Trigger: CCACCACAAGCAGTTTCTCAAGCTGGACCCAGTGCC...AAAAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR-3UTR CAA 90 bp GGTGCTTTTGAAATAGCTGGGGACCTTGTGACGGAAGTATGGGTAAGTGCAGAGCTTACTGCATTTTACTaGCCTTCATCTCAGTGTAGC +
Preference number: 3 (lower is better)
Translates to: GAFEIAGDLVTEVWVSAELTAFY*PSSQCS
Trigger: GCTACACTGAGATGAAGGCAAGTAAAATGCAGTAAG...CTCTGCACTTACCCATACTTCCGTCACAAGGTCCCCAGCTATTTCAAAAGCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR CCA 72 bp ATAAGCGCAGGTATGAATGGAGGTACTATAGATCTGTaGTTTGGGATAGTAATGGCAGCAGTATCTGGGCCC +
Preference number: 3 (lower is better)
Translates to: ISAGMNGGTIDL*FGIVMAAVSGP
Trigger: GGGCCCAGATACTGCTGCCATTACTATCCCAAACCACAGATCTATAGTACCTCCATTCATACCTGCGCTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR-3UTR CAA 90 bp GGTGCTTTTGAAATAGCTGGGGACCTTGTGACGGAAGTATGGGTAAGTGCAGAGATCCATAATAAAAACTaGCTGGTTTTGCAGCTTGGG +
Preference number: 3 (lower is better)
Translates to: GAFEIAGDLVTEVWVSAEIHNKN*LVLQLG
Trigger: CCCAAGCTGCAAAACCAGCAAGTTTTTATTATGGAT...CTCTGCACTTACCCATACTTCCGTCACAAGGTCCCCAGCTATTTCAAAAGCACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR GCA 72 bp TCTTGCTCTGTCCCCATTTGCCTTGTGATATTTTATTaGCTTGTGATGCATGTGATCTCTGTGACCCACACC +
Preference number: 3 (lower is better)
Translates to: SCSVPICLVIFY*LVMHVISVTHT
Trigger: GGTGTGGGTCACAGAGATCACATGCATCACAAGGCAATAAAATATCACAAGGCAAATGGGGACAGAGCAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR CCA 72 bp GGGCATAAAACTTCATTAGCAATGTTAATTTCACCCTaGTCCTGTGATCTTGCTCTGTCCCCATTTGCCTTG +
Preference number: 3 (lower is better)
Translates to: GHKTSLAMLISP*SCDLALSPFAL
Trigger: CAAGGCAAATGGGGACAGAGCAAGATCACAGGACCAGGGTGAAATTAACATTGCTAATGAAGTTTTATGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR CCA 72 bp AAGCCATGGATCTGGAGCCATAAGCGCAGGTATGAATaGAGGTACTATAGATCTGTGGTTTGGGATAGTAAT +
Preference number: 3 (lower is better)
Translates to: KPWIWSHKRRYE*RYYRSVVWDSN
Trigger: ATTACTATCCCAAACCACAGATCTATAGTACCTCCATTCATACCTGCGCTTATGGCTCCAGATCCATGGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR-3UTR CAA 90 bp CTTCTTACAAAAGTGAATAGGAGAAATATCGCTGAATTCTTTTTCTCAGCAAGGCCTGGTCCTGTGATCTaGCTCTGTCCCCATTTGCCT +
Preference number: 3 (lower is better)
Translates to: LLTKVNRRNIAEFFFSARPGPVI*LCPHLP
Trigger: AGGCAAATGGGGACAGAGCAAGATCACAGGACCAGG...CCTTGCTGAGAAAAAGAATTCAGCGATATTTCTCCTATTCACTTTTGTAAGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR GCA 72 bp CATGTGATCTCTGTGACCCACACCCTATTCGTACACTaGCTCCCTTTTGAAATCCATAATAAAAACTTGCTG +
Preference number: 3 (lower is better)
Translates to: HVISVTHTLFVH*LPFEIHNKNLL
Trigger: CAGCAAGTTTTTATTATGGATTTCAAAAGGGAGGCAGTGTACGAATAGGGTGTGGGTCACAGAGATCACATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR-3UTR CAA 90 bp AAAAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTCTTACTGCATTTTACTaGCCTTCATCTCAGTGTAGC +
Preference number: 3 (lower is better)
Translates to: KNCCGLWWLGLLKSFLSLLTAFY*PSSQCS
Trigger: GCTACACTGAGATGAAGGCAAGTAAAATGCAGTAAG...AAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR-3UTR CAA 90 bp AAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTTTCACAAGAAAACCATCTaGGTTCTAGGACTAGAGTTC +
Preference number: 3 (lower is better)
Translates to: KLLWSLVARAAKVLSISFHKKTI*VLGLEF
Trigger: GAACTCTAGTCCTAGAACCAAGATGGTTTTCTTGTG...AAAAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR-3UTR CAA 90 bp AAAAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTAGCTTGAGAAACTGCTaGTGGTGGTTTTGGCATAAA +
Preference number: 3 (lower is better)
Translates to: KNCCGLWWLGLLKSFLSLSLRNC*WWFWHK
Trigger: TTTATGCCAAAACCACCACAAGCAGTTTCTCAAGCT...AAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR-3UTR CAA 90 bp AAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTTTAGCTTGAGAAACTGCTaGTGGTGGTTTTGGCATAAA +
Preference number: 3 (lower is better)
Translates to: KLLWSLVARAAKVLSISFSLRNC*WWFWHK
Trigger: TTTATGCCAAAACCACCACAAGCAGTTTCTCAAGCT...AAAAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR-3UTR CAA 90 bp AAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTTTAGAAAAGAACCTATGTaGAAATATTGGGGGCTGGTT +
Preference number: 3 (lower is better)
Translates to: KLLWSLVARAAKVLSISFRKEPM*KYWGLV
Trigger: AACCAGCCCCCAATATTTCAACATAGGTTCTTTTCT...AAAAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR-3UTR CAA 90 bp AAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTTTTTGCTCTGTCCCCATTaGCCTTGTGATATTTTATTG +
Preference number: 3 (lower is better)
Translates to: KLLWSLVARAAKVLSISFLLCPH*PCDILL
Trigger: CAATAAAATATCACAAGGCAAATGGGGACAGAGCAA...AAAAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR-3UTR CAA 90 bp AAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTTTCCTTGTGATATTTTATaGCCTTGTGATGCATGTGAT +
Preference number: 3 (lower is better)
Translates to: KLLWSLVARAAKVLSISFPCDIL*PCDACD
Trigger: ATCACATGCATCACAAGGCAATAAAATATCACAAGG...AAAAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR GCA 72 bp TTTTTGGTGTTTCTTGTTGTCTTAAGCAGATTTCTGTaGATTTGTTGGAGCAGTCATCTCTTCCAGACTTCA +
Preference number: 3 (lower is better)
Translates to: FLVFLVVLSRFL*ICWSSHLFQTS
Trigger: TGAAGTCTGGAAGAGATGACTGCTCCAACAAATGCACAGAAATCTGCTTAAGACAACAAGAAACACCAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR TCA 72 bp GGACCTGCTGAAGCCGTGACAGAAGAACATAAATTTTaGAGATTTCATGGACATTTATTAGTTCCCCAAATT +
Preference number: 3 (lower is better)
Translates to: GPAEAVTEEHKF*RFHGHLLVPQI
Trigger: AATTTGGGGAACTAATAAATGTCCATGAAATCTTCAAAATTTATGTTCTTCTGTCACGGCTTCAGCAGGTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR TCA 72 bp AAAGTACATATCTATCAAGCTCCTCTGAAGGACAAGTaGGTCTCTGACACCTTTTATAACTCAGTCAACATT +
Preference number: 3 (lower is better)
Translates to: KVHIYQAPLKDK*VSDTFYNSVNI
Trigger: AATGTTGACTGAGTTATAAAAGGTGTCAGAGACTCACTTGTCCTTCAGAGGAGCTTGATAGATATGTACTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR-3UTR CAA 90 bp CTTCTTACAAAAGTGAATAGGAGAAATATCGCTGAATTCTTTTTCTCAGCAAGGAGAAAAGAACCTATGTaGAAATATTGGGGGCTGGTT +
Preference number: 3 (lower is better)
Translates to: LLTKVNRRNIAEFFFSARRKEPM*KYWGLV
Trigger: AACCAGCCCCCAATATTTCAACATAGGTTCTTTTCT...CCTTGCTGAGAAAAAGAATTCAGCGATATTTCTCCTATTCACTTTTGTAAGAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR-3UTR CAA 90 bp CTTCTTACAAAAGTGAATAGGAGAAATATCGCTGAATTCTTTTTCTCAGCAAGGATCCATAATAAAAACTaGCTGGTTTTGCAGCTTGGG +
Preference number: 3 (lower is better)
Translates to: LLTKVNRRNIAEFFFSARIHNKN*LVLQLG
Trigger: CCCAAGCTGCAAAACCAGCAAGTTTTTATTATGGAT...CCTTGCTGAGAAAAAGAATTCAGCGATATTTCTCCTATTCACTTTTGTAAGAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR-3UTR CAA 90 bp CTTCTTACAAAAGTGAATAGGAGAAATATCGCTGAATTCTTTTTCTCAGCAAGGTTGCTCTGTCCCCATTaGCCTTGTGATATTTTATTG +
Preference number: 3 (lower is better)
Translates to: LLTKVNRRNIAEFFFSARLLCPH*PCDILL
Trigger: CAATAAAATATCACAAGGCAAATGGGGACAGAGCAA...CCTTGCTGAGAAAAAGAATTCAGCGATATTTCTCCTATTCACTTTTGTAAGAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR TCA 72 bp GGGTGGAACAGAGTCATATTTCTCTTCTTACAAAAGTaGATAGGAGAAATATCGCTGAATTCTTTTTCTCAG +
Preference number: 3 (lower is better)
Translates to: GWNRVIFLFLQK*IGEISLNSFSQ
Trigger: CTGAGAAAAAGAATTCAGCGATATTTCTCCTATTCACTTTTGTAAGAAGAGAAATATGACTCTGTTCCACCC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR GCA 72 bp CTCCAAGACCTCCCTGTGATTATCAAAATCTATAGATaGTTAAGTCCCTTATACAAAATGTCACAGTATTTG +
Preference number: 3 (lower is better)
Translates to: LQDLPVIIKIYR*LSPLYKMSQYL
Trigger: CAAATACTGTGACATTTTGTATAAGGGACTTAAGCATCTATAGATTTTGATAATCACAGGGAGGTCTTGGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR GCA 90 bp GGTGCTTTTGAAATAGCTGGGGACCTTGTGACGGAAGTATGGGTAAGTGCAGAGCTGCCTTGGCTCTGTTaGGGGAAGTCAGGGACCCCG +
Preference number: 4 (lower is better)
Translates to: GAFEIAGDLVTEVWVSAELPWLC*GKSGTP
Trigger: CGGGGTCCCTGACTTCCCGCAACAGAGCCAAGGCAG...CTCTGCACTTACCCATACTTCCGTCACAAGGTCCCCAGCTATTTCAAAAGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR TCA 90 bp GGTGCTTTTGAAATAGCTGGGGACCTTGTGACGGAAGTATGGGTAAGTGCAGAGGAACCCGCTGACATGTaGTGTCTCCCCTGGACACCC +
Preference number: 4 (lower is better)
Translates to: GAFEIAGDLVTEVWVSAEEPADM*CLPWTP
Trigger: GGGTGTCCAGGGGAGACATCACATGTCAGCGGGTTC...CTCTGCACTTACCCATACTTCCGTCACAAGGTCCCCAGCTATTTCAAAAGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR CCA 90 bp GGTGCTTTTGAAATAGCTGGGGACCTTGTGACGGAAGTATGGGTAAGTGCAGAGCCACTGGGGATGTTGTaGCTGGAGGAATCCCTCTTG +
Preference number: 4 (lower is better)
Translates to: GAFEIAGDLVTEVWVSAEPLGML*LEESLL
Trigger: CAAGAGGGATTCCTCCAGCCACAACATCCCCAGTGG...CTCTGCACTTACCCATACTTCCGTCACAAGGTCCCCAGCTATTTCAAAAGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR CCA 90 bp GGTGCTTTTGAAATAGCTGGGGACCTTGTGACGGAAGTATGGGTAAGTGCAGAGAGAAACTCTACATCCTaGGAGCTGGTCAGTCCCAGC +
Preference number: 4 (lower is better)
Translates to: GAFEIAGDLVTEVWVSAERNSTS*ELVSPS
Trigger: GCTGGGACTGACCAGCTCCCAGGATGTAGAGTTTCT...CTCTGCACTTACCCATACTTCCGTCACAAGGTCCCCAGCTATTTCAAAAGCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR CCA 90 bp GGTGCTTTTGAAATAGCTGGGGACCTTGTGACGGAAGTATGGGTAAGTGCAGAGAATGGCAGCAGTATCTaGGCCCAGGAATTCCACTGC +
Preference number: 4 (lower is better)
Translates to: GAFEIAGDLVTEVWVSAENGSSI*AQEFHC
Trigger: GCAGTGGAATTCCTGGGCCCAGATACTGCTGCCATT...CTCTGCACTTACCCATACTTCCGTCACAAGGTCCCCAGCTATTTCAAAAGCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR CAA 72 bp ATCCCTCTTGGCACTGGGTCCAGCTTGAGAAACTGCTaGTGGTGGTTTTGGCATAAATGTCTGACGAGGGGT +
Preference number: 4 (lower is better)
Translates to: IPLGTGSSLRNC*WWFWHKCLTRG
Trigger: ACCCCTCGTCAGACATTTATGCCAAAACCACCACAAGCAGTTTCTCAAGCTGGACCCAGTGCCAAGAGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR CCA 90 bp GGTGCTTTTGAAATAGCTGGGGACCTTGTGACGGAAGTATGGGTAAGTGCAGAGTGCCTGGGAGCTGGGTaGAACAGAGTCATATTTCTC +
Preference number: 4 (lower is better)
Translates to: GAFEIAGDLVTEVWVSAECLGAG*NRVIFL
Trigger: GAGAAATATGACTCTGTTCCACCCAGCTCCCAGGCA...CTCTGCACTTACCCATACTTCCGTCACAAGGTCCCCAGCTATTTCAAAAGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR TCA 90 bp AAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTTTGAACCCGCTGACATGTaGTGTCTCCCCTGGACACCC +
Preference number: 4 (lower is better)
Translates to: KLLWSLVARAAKVLSISFEPADM*CLPWTP
Trigger: GGGTGTCCAGGGGAGACATCACATGTCAGCGGGTTC...AAAAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR TCA 90 bp GGTGCTTTTGAAATAGCTGGGGACCTTGTGACGGAAGTATGGGTAAGTGCAGAGTCTATCAAGCTCCTCTaGAGGACAAGTGAGTCTCTG +
Preference number: 4 (lower is better)
Translates to: GAFEIAGDLVTEVWVSAESIKLL*RTSESL
Trigger: CAGAGACTCACTTGTCCTTCAGAGGAGCTTGATAGA...CTCTGCACTTACCCATACTTCCGTCACAAGGTCCCCAGCTATTTCAAAAGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR CCA 90 bp GGTGCTTTTGAAATAGCTGGGGACCTTGTGACGGAAGTATGGGTAAGTGCAGAGAAGAAGTCAGGGCCATaGGTTCAGAGGGGACAATAT +
Preference number: 4 (lower is better)
Translates to: GAFEIAGDLVTEVWVSAEKKSGP*VQRGQY
Trigger: ATATTGTCCCCTCTGAACCCATGGCCCTGACTTCTT...CTCTGCACTTACCCATACTTCCGTCACAAGGTCCCCAGCTATTTCAAAAGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR CCA 90 bp GGTGCTTTTGAAATAGCTGGGGACCTTGTGACGGAAGTATGGGTAAGTGCAGAGCCTACAGCTCGCTCTTaGATGACCAGTTCAGAAGAA +
Preference number: 4 (lower is better)
Translates to: GAFEIAGDLVTEVWVSAEPTARS*MTSSEE
Trigger: TTCTTCTGAACTGGTCATCCAAGAGCGAGCTGTAGG...CTCTGCACTTACCCATACTTCCGTCACAAGGTCCCCAGCTATTTCAAAAGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641386.2
CDS-3UTR CCA 90 bp GGTGCTTTTGAAATAGCTGGGGACCTTGTGACGGAAGTATGGGTAAGTGCAGAGGAAACTAATTCTCTATaGTGGCTGAGCCGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: GAFEIAGDLVTEVWVSAEETNSL*WLSRCS
Trigger: TGAGCACCGGCTCAGCCACCATAGAGAATTAGTTTC...CTCTGCACTTACCCATACTTCCGTCACAAGGTCCCCAGCTATTTCAAAAGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR CCA 90 bp GGTGCTTTTGAAATAGCTGGGGACCTTGTGACGGAAGTATGGGTAAGTGCAGAGCTTGTGACGGAAGTATaGGTAAGTGCAGAGTTGCAG +
Preference number: 4 (lower is better)
Translates to: GAFEIAGDLVTEVWVSAELVTEV*VSAELQ
Trigger: CTGCAACTCTGCACTTACCCATACTTCCGTCACAAG...CTCTGCACTTACCCATACTTCCGTCACAAGGTCCCCAGCTATTTCAAAAGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR TCA 90 bp AAAAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTCAGGCTGGAGGGCAGTaGCACAAACTCAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: KNCCGLWWLGLLKSFLSLQAGGQ*HKLSSL
Trigger: CAGTGAGCTGAGTTTGTGTCACTGCCCTCCAGCCTG...AAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR GCA 90 bp AAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTTTTGGTGGCTGAGCCGGTaGTCAGCACACAGTCACACA +
Preference number: 4 (lower is better)
Translates to: KLLWSLVARAAKVLSISFWWLSR*SAHSHT
Trigger: TGTGTGACTGTGTGCTGAGCACCGGCTCAGCCACCA...AAAAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR GCA 90 bp GGTGCTTTTGAAATAGCTGGGGACCTTGTGACGGAAGTATGGGTAAGTGCAGAGAAGTGGATCTTGGATTaGTCTTTCCACTGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: GAFEIAGDLVTEVWVSAEKWILD*SFHCRK
Trigger: CTTCCTGCAGTGGAAAGAGCAATCCAAGATCCACTT...CTCTGCACTTACCCATACTTCCGTCACAAGGTCCCCAGCTATTTCAAAAGCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641633.2
CDS-3UTR CCA 90 bp GGTGCTTTTGAAATAGCTGGGGACCTTGTGACGGAAGTATGGGTAAGTGCAGAGAACTTATCTACAGAGTaGTTGCCGAAGGGCCAAATG +
Preference number: 4 (lower is better)
Translates to: GAFEIAGDLVTEVWVSAENLSTE*LPKGQM
Trigger: CATTTGGCCCTTCGGCAACCACTCTGTAGATAAGTT...CTCTGCACTTACCCATACTTCCGTCACAAGGTCCCCAGCTATTTCAAAAGCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR CCA 90 bp GGTGCTTTTGAAATAGCTGGGGACCTTGTGACGGAAGTATGGGTAAGTGCAGAGCCTATGTTGAAATATTaGGGGCTGGTTCCCCTGATA +
Preference number: 4 (lower is better)
Translates to: GAFEIAGDLVTEVWVSAEPMLKY*GLVPLI
Trigger: TATCAGGGGAACCAGCCCCCAATATTTCAACATAGG...CTCTGCACTTACCCATACTTCCGTCACAAGGTCCCCAGCTATTTCAAAAGCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR CCA 90 bp GGTGCTTTTGAAATAGCTGGGGACCTTGTGACGGAAGTATGGGTAAGTGCAGAGTGCTTGTGGTGGTTTTaGCATAAATGTCTGACGAGG +
Preference number: 4 (lower is better)
Translates to: GAFEIAGDLVTEVWVSAECLWWF*HKCLTR
Trigger: CCTCGTCAGACATTTATGCCAAAACCACCACAAGCA...CTCTGCACTTACCCATACTTCCGTCACAAGGTCCCCAGCTATTTCAAAAGCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR TCA 90 bp GGTGCTTTTGAAATAGCTGGGGACCTTGTGACGGAAGTATGGGTAAGTGCAGAGATCATCTTCTTAAGCTaGGGATGTATGTTGCCTCAG +
Preference number: 4 (lower is better)
Translates to: GAFEIAGDLVTEVWVSAEIIFLS*GCMLPQ
Trigger: CTGAGGCAACATACATCCTCAGCTTAAGAAGATGAT...CTCTGCACTTACCCATACTTCCGTCACAAGGTCCCCAGCTATTTCAAAAGCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR TCA 90 bp AAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTTTCTGGTCTCAAACTCCTaGCCTCAAGTCAGCCAAGGC +
Preference number: 4 (lower is better)
Translates to: KLLWSLVARAAKVLSISFLVSNS*PQVSQG
Trigger: GCCTTGGCTGACTTGAGGTCAGGAGTTTGAGACCAG...AAAAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR GCA 90 bp AAAAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTACCATTAGGTCTGACTaGCTGGGAGCTGGGTGGAAC +
Preference number: 4 (lower is better)
Translates to: KNCCGLWWLGLLKSFLSLTIRSD*LGAGWN
Trigger: GTTCCACCCAGCTCCCAGGCAGTCAGACCTAATGGT...AAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR CCA 90 bp AAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTTTTTAGGTCTGACTGCCTaGGAGCTGGGTGGAACAGAG +
Preference number: 4 (lower is better)
Translates to: KLLWSLVARAAKVLSISFLGLTA*ELGGTE
Trigger: CTCTGTTCCACCCAGCTCCCAGGCAGTCAGACCTAA...AAAAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR TCA 90 bp AAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTTTCAGCTCGCTCTTGGATaGCCTCCCACTGTTTTCCTT +
Preference number: 4 (lower is better)
Translates to: KLLWSLVARAAKVLSISFQLALG*PPTVFL
Trigger: AAGGAAAACAGTGGGAGGTCATCCAAGAGCGAGCTG...AAAAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641633.2
CDS-3UTR GCA 90 bp GGTGCTTTTGAAATAGCTGGGGACCTTGTGACGGAAGTATGGGTAAGTGCAGAGATATCGAGAAGGGCATaGACCTTCTCAACTTATAGT +
Preference number: 4 (lower is better)
Translates to: GAFEIAGDLVTEVWVSAEISRRA*TFSTYS
Trigger: ACTATAAGTTGAGAAGGTGCATGCCCTTCTCGATAT...CTCTGCACTTACCCATACTTCCGTCACAAGGTCCCCAGCTATTTCAAAAGCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR GCA 90 bp GGTGCTTTTGAAATAGCTGGGGACCTTGTGACGGAAGTATGGGTAAGTGCAGAGTCCATAATAAAAACTTaGTGGTTTTGCAGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: GAFEIAGDLVTEVWVSAESIIKT*WFCSLG
Trigger: CCCCAAGCTGCAAAACCAGCAAGTTTTTATTATGGA...CTCTGCACTTACCCATACTTCCGTCACAAGGTCCCCAGCTATTTCAAAAGCACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR GCA 90 bp GGTGCTTTTGAAATAGCTGGGGACCTTGTGACGGAAGTATGGGTAAGTGCAGAGTGCTCTGTCCCCATTTaGCTTGTGATATTTTATTGC +
Preference number: 4 (lower is better)
Translates to: GAFEIAGDLVTEVWVSAECSVPI*LVIFYC
Trigger: GCAATAAAATATCACAAGGCAAATGGGGACAGAGCA...CTCTGCACTTACCCATACTTCCGTCACAAGGTCCCCAGCTATTTCAAAAGCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR GCA 90 bp GGTGCTTTTGAAATAGCTGGGGACCTTGTGACGGAAGTATGGGTAAGTGCAGAGCAAACTATAATGGTATaGAAGGTGCAGGTGCTTTTG +
Preference number: 4 (lower is better)
Translates to: GAFEIAGDLVTEVWVSAEQTIMV*KVQVLL
Trigger: CAAAAGCACCTGCACCTTGCATACCATTATAGTTTG...CTCTGCACTTACCCATACTTCCGTCACAAGGTCCCCAGCTATTTCAAAAGCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR CCA 90 bp GGTGCTTTTGAAATAGCTGGGGACCTTGTGACGGAAGTATGGGTAAGTGCAGAGAGAAACTGCTTGTGGTaGTTTTGGCATAAATGTCTG +
Preference number: 4 (lower is better)
Translates to: GAFEIAGDLVTEVWVSAERNCLW*FWHKCL
Trigger: CAGACATTTATGCCAAAACCACCACAAGCAGTTTCT...CTCTGCACTTACCCATACTTCCGTCACAAGGTCCCCAGCTATTTCAAAAGCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR CCA 90 bp AAAAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTCTCTTTTTCTCCCACTaGGGATGTTGTGGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: KNCCGLWWLGLLKSFLSLLFFSH*GCCGWR
Trigger: CCTCCAGCCACAACATCCCCAGTGGGAGAAAAAGAG...AAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR TCA 90 bp AAAAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTGAGACCCAAGAGCCATaGGGTCACTACAAGCAAAAC +
Preference number: 4 (lower is better)
Translates to: KNCCGLWWLGLLKSFLSLETQEP*GHYKQN
Trigger: GTTTTGCTTGTAGTGACCTCATGGCTCTTGGGTCTC...AAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR TCA 90 bp AAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTTTGAGACCCAAGAGCCATaGGGTCACTACAAGCAAAAC +
Preference number: 4 (lower is better)
Translates to: KLLWSLVARAAKVLSISFETQEP*GHYKQN
Trigger: GTTTTGCTTGTAGTGACCTCATGGCTCTTGGGTCTC...AAAAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR TCA 90 bp AAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTTTTGGTATCTGAAACCCTaGGTGAAGGAGACCCAAGAG +
Preference number: 4 (lower is better)
Translates to: KLLWSLVARAAKVLSISFWYLKP*VKETQE
Trigger: CTCTTGGGTCTCCTTCACTCAGGGTTTCAGATACCA...AAAAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR TCA 90 bp GGTGCTTTTGAAATAGCTGGGGACCTTGTGACGGAAGTATGGGTAAGTGCAGAGCACTGTTGGCAACAATaGCTACCTGTACAAAATATA +
Preference number: 4 (lower is better)
Translates to: GAFEIAGDLVTEVWVSAEHCWQQ*LPVQNI
Trigger: TATATTTTGTACAGGTAGTCATTGTTGCCAACAGTG...CTCTGCACTTACCCATACTTCCGTCACAAGGTCCCCAGCTATTTCAAAAGCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR TCA 90 bp GGTGCTTTTGAAATAGCTGGGGACCTTGTGACGGAAGTATGGGTAAGTGCAGAGCAATCAATACTCTTGTaGTTTCCTATGCCTGTCTTT +
Preference number: 4 (lower is better)
Translates to: GAFEIAGDLVTEVWVSAEQSILL*FPMPVF
Trigger: AAAGACAGGCATAGGAAATCACAAGAGTATTGATTG...CTCTGCACTTACCCATACTTCCGTCACAAGGTCCCCAGCTATTTCAAAAGCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR TCA 90 bp CTTCTTACAAAAGTGAATAGGAGAAATATCGCTGAATTCTTTTTCTCAGCAAGGCAGGCTGGAGGGCAGTaGCACAAACTCAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: LLTKVNRRNIAEFFFSARQAGGQ*HKLSSL
Trigger: CAGTGAGCTGAGTTTGTGTCACTGCCCTCCAGCCTG...CCTTGCTGAGAAAAAGAATTCAGCGATATTTCTCCTATTCACTTTTGTAAGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR TCA 90 bp GGTGCTTTTGAAATAGCTGGGGACCTTGTGACGGAAGTATGGGTAAGTGCAGAGAGATGTTTGAAGTGGTaGCAAAAATTGTTGTGGTCT +
Preference number: 4 (lower is better)
Translates to: GAFEIAGDLVTEVWVSAERCLKW*QKLLWS
Trigger: AGACCACAACAATTTTTGTCACCACTTCAAACATCT...CTCTGCACTTACCCATACTTCCGTCACAAGGTCCCCAGCTATTTCAAAAGCACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR GCA 90 bp AAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTTTGAACGGGCTTTAGATTaGCCAGTAGGAGAGTGGTTC +
Preference number: 4 (lower is better)
Translates to: KLLWSLVARAAKVLSISFERALD*PVGEWF
Trigger: GAACCACTCTCCTACTGGGCAATCTAAAGCCCGTTC...AAAAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR GCA 90 bp AAAAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTGAACGGGCTTTAGATTaGCCAGTAGGAGAGTGGTTC +
Preference number: 4 (lower is better)
Translates to: KNCCGLWWLGLLKSFLSLERALD*PVGEWF
Trigger: GAACCACTCTCCTACTGGGCAATCTAAAGCCCGTTC...AAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR GCA 90 bp CTTCTTACAAAAGTGAATAGGAGAAATATCGCTGAATTCTTTTTCTCAGCAAGGTGGTGGCTGAGCCGGTaGTCAGCACACAGTCACACA +
Preference number: 4 (lower is better)
Translates to: LLTKVNRRNIAEFFFSARWWLSR*SAHSHT
Trigger: TGTGTGACTGTGTGCTGAGCACCGGCTCAGCCACCA...CCTTGCTGAGAAAAAGAATTCAGCGATATTTCTCCTATTCACTTTTGTAAGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR GCA 90 bp GGTGCTTTTGAAATAGCTGGGGACCTTGTGACGGAAGTATGGGTAAGTGCAGAGTTAAGCAGATTTCTGTaGATTTGTTGGAGCAGTCAT +
Preference number: 4 (lower is better)
Translates to: GAFEIAGDLVTEVWVSAELSRFL*ICWSSH
Trigger: ATGACTGCTCCAACAAATGCACAGAAATCTGCTTAA...CTCTGCACTTACCCATACTTCCGTCACAAGGTCCCCAGCTATTTCAAAAGCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR CCA 90 bp AAAAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTAATCCCTCTTGGCACTaGGTCCAGCTTGAGAAACTG +
Preference number: 4 (lower is better)
Translates to: KNCCGLWWLGLLKSFLSLNPSWH*VQLEKL
Trigger: CAGTTTCTCAAGCTGGACCCAGTGCCAAGAGGGATT...AAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR CCA 90 bp GGTGCTTTTGAAATAGCTGGGGACCTTGTGACGGAAGTATGGGTAAGTGCAGAGGGTGATACTCCCTTTTaGTTTTTGGTGTTTCTTGTT +
Preference number: 4 (lower is better)
Translates to: GAFEIAGDLVTEVWVSAEGDTPF*FLVFLV
Trigger: AACAAGAAACACCAAAAACCAAAAGGGAGTATCACC...CTCTGCACTTACCCATACTTCCGTCACAAGGTCCCCAGCTATTTCAAAAGCACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR CCA 90 bp GGTGCTTTTGAAATAGCTGGGGACCTTGTGACGGAAGTATGGGTAAGTGCAGAGAGGTCTCTGTTTCTTTaGAGACAGATACTGGAAAAT +
Preference number: 4 (lower is better)
Translates to: GAFEIAGDLVTEVWVSAERSLFL*RQILEN
Trigger: ATTTTCCAGTATCTGTCTCCAAAGAAACAGAGACCT...CTCTGCACTTACCCATACTTCCGTCACAAGGTCCCCAGCTATTTCAAAAGCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR CCA 90 bp AAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTTTCCTACAGCTCGCTCTTaGATGACCTCCCACTGTTTT +
Preference number: 4 (lower is better)
Translates to: KLLWSLVARAAKVLSISFPTARS*MTSHCF
Trigger: AAAACAGTGGGAGGTCATCCAAGAGCGAGCTGTAGG...AAAAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641633.2
3UTR CAA 72 bp GTTTCTTGTTGTCTTAAGCAGATTTCTGTGCATTTGTaGGAGCAGTCATCTCTTCCAGACTTCACAGGCTGG +
Preference number: 4 (lower is better)
Translates to: VSCCLKQISVHL*EQSSLPDFTGW
Trigger: CCAGCCTGTGAAGTCTGGAAGAGATGACTGCTCCAACAAATGCACAGAAATCTGCTTAAGACAACAAGAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
3UTR CAA 72 bp GGTGTTTCTTGTTGTCTTAAGCAGATTTCTGTGCATTaGTTGGAGCAGTCATCTCTTCCAGACTTCACAGGC +
Preference number: 4 (lower is better)
Translates to: GVSCCLKQISVH*LEQSSLPDFTG
Trigger: GCCTGTGAAGTCTGGAAGAGATGACTGCTCCAACAAATGCACAGAAATCTGCTTAAGACAACAAGAAACACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR TCA 90 bp AAAAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTTCTATCAAGCTCCTCTaGAGGACAAGTGAGTCTCTG +
Preference number: 4 (lower is better)
Translates to: KNCCGLWWLGLLKSFLSLSIKLL*RTSESL
Trigger: CAGAGACTCACTTGTCCTTCAGAGGAGCTTGATAGA...AAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR TCA 90 bp CTTCTTACAAAAGTGAATAGGAGAAATATCGCTGAATTCTTTTTCTCAGCAAGGGCACTGGGTCCAGCTTaGGAAACTGCTTGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: LLTKVNRRNIAEFFFSARALGPA*ETACGG
Trigger: ACCACCACAAGCAGTTTCTCAAGCTGGACCCAGTGC...CCTTGCTGAGAAAAAGAATTCAGCGATATTTCTCCTATTCACTTTTGTAAGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR GCA 90 bp GGTGCTTTTGAAATAGCTGGGGACCTTGTGACGGAAGTATGGGTAAGTGCAGAGGTTCTTGGACTTTACTaGACTTCCTTAAGACAATTA +
Preference number: 4 (lower is better)
Translates to: GAFEIAGDLVTEVWVSAEVLGLY*TSLRQL
Trigger: TAATTGTCTTAAGGAAGTGCAGTAAAGTCCAAGAAC...CTCTGCACTTACCCATACTTCCGTCACAAGGTCCCCAGCTATTTCAAAAGCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR CCA 90 bp CTTCTTACAAAAGTGAATAGGAGAAATATCGCTGAATTCTTTTTCTCAGCAAGGTTAGGTCTGACTGCCTaGGAGCTGGGTGGAACAGAG +
Preference number: 4 (lower is better)
Translates to: LLTKVNRRNIAEFFFSARLGLTA*ELGGTE
Trigger: CTCTGTTCCACCCAGCTCCCAGGCAGTCAGACCTAA...CCTTGCTGAGAAAAAGAATTCAGCGATATTTCTCCTATTCACTTTTGTAAGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR TCA 90 bp AAAAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTCCTCTGAAGGACAAGTaGGTCTCTGACACCTTTTAT +
Preference number: 4 (lower is better)
Translates to: KNCCGLWWLGLLKSFLSLPLKDK*VSDTFY
Trigger: ATAAAAGGTGTCAGAGACTCACTTGTCCTTCAGAGG...AAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR TCA 90 bp AAAAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTACAGAGAACCAAACATaGTCTCACAGTGAGTGCCAA +
Preference number: 4 (lower is better)
Translates to: KNCCGLWWLGLLKSFLSLTENQT*SHSECQ
Trigger: TTGGCACTCACTGTGAGATCATGTTTGGTTCTCTGT...AAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR TCA 90 bp AAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTTTTGTGAGGGGATTGGTTaGGTAAAACACAACTGCTCT +
Preference number: 4 (lower is better)
Translates to: KLLWSLVARAAKVLSISFCEGIG*VKHNCS
Trigger: AGAGCAGTTGTGTTTTACTCAACCAATCCCCTCACA...AAAAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR TCA 90 bp AAAAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTGATATGCCAGAAAACTaGCTGTGCTTAGTACCTCCA +
Preference number: 4 (lower is better)
Translates to: KNCCGLWWLGLLKSFLSLDMPEN*LCLVPP
Trigger: TGGAGGTACTAAGCACAGTCAGTTTTCTGGCATATC...AAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR GCA 90 bp AAAAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTTATCTACAGAGTGGTTaGCGAAGGGCCAAATGTAGA +
Preference number: 4 (lower is better)
Translates to: KNCCGLWWLGLLKSFLSLYLQSG*RRAKCR
Trigger: TCTACATTTGGCCCTTCGGCAACCACTCTGTAGATA...AAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR GCA 90 bp AAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTTTGCCCAGGAATTCCACTaGCCAAACTATAATGGTATG +
Preference number: 4 (lower is better)
Translates to: KLLWSLVARAAKVLSISFAQEFH*PNYNGM
Trigger: CATACCATTATAGTTTGGGCAGTGGAATTCCTGGGC...AAAAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR GCA 90 bp AAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTTTGATTGCTCTTTCCACTaGAGGAAGAAACTGGATGTG +
Preference number: 4 (lower is better)
Translates to: KLLWSLVARAAKVLSISFDCSFH*RKKLDV
Trigger: CACATCCAGTTTCTTCCTGCAGTGGAAAGAGCAATC...AAAAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641633.2
CDS-3UTR CCA 90 bp AAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTTTTGCTTGTGGTGGTTTTaGCATAAATGTCTGACGAGG +
Preference number: 4 (lower is better)
Translates to: KLLWSLVARAAKVLSISFCLWWF*HKCLTR
Trigger: CCTCGTCAGACATTTATGCCAAAACCACCACAAGCA...AAAAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR CCA 90 bp CTTCTTACAAAAGTGAATAGGAGAAATATCGCTGAATTCTTTTTCTCAGCAAGGCTCTTTTTCTCCCACTaGGGATGTTGTGGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: LLTKVNRRNIAEFFFSARLFFSH*GCCGWR
Trigger: CCTCCAGCCACAACATCCCCAGTGGGAGAAAAAGAG...CCTTGCTGAGAAAAAGAATTCAGCGATATTTCTCCTATTCACTTTTGTAAGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR CCA 90 bp AAAAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTCCAGACTTCACAGGCTaGTTTCAGTACAGAAAGAAC +
Preference number: 4 (lower is better)
Translates to: KNCCGLWWLGLLKSFLSLPDFTG*FQYRKN
Trigger: GTTCTTTCTGTACTGAAACCAGCCTGTGAAGTCTGG...AAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR CCA 90 bp AAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTTTGGAAGAAACTGGATGTaGCTGCAGTTCAGAAGAAGT +
Preference number: 4 (lower is better)
Translates to: KLLWSLVARAAKVLSISFGRNWM*LQFRRS
Trigger: ACTTCTTCTGAACTGCAGCCACATCCAGTTTCTTCC...AAAAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641633.2
CDS-3UTR TCA 90 bp AAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTTTGGAGAAATATCTGAGTaGAGCACCCAGCAAAAGAAA +
Preference number: 4 (lower is better)
Translates to: KLLWSLVARAAKVLSISFGEISE*STQQKK
Trigger: TTTCTTTTGCTGGGTGCTTCACTCAGATATTTCTCC...AAAAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR TCA 90 bp AAAAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTGGAGAAATATCTGAGTaGAGCACCCAGCAAAAGAAA +
Preference number: 4 (lower is better)
Translates to: KNCCGLWWLGLLKSFLSLGEISE*STQQKK
Trigger: TTTCTTTTGCTGGGTGCTTCACTCAGATATTTCTCC...AAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR TCA 90 bp AAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTTTATACCTTCTTGTTCATaGTGGTCATGTAGTGTAGGG +
Preference number: 4 (lower is better)
Translates to: KLLWSLVARAAKVLSISFIPSCS*WSCSVG
Trigger: CCCTACACTACATGACCATCATGAACAAGAAGGTAT...AAAAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR TCA 90 bp CTTCTTACAAAAGTGAATAGGAGAAATATCGCTGAATTCTTTTTCTCAGCAAGGTGGTATCTGAAACCCTaGGTGAAGGAGACCCAAGAG +
Preference number: 4 (lower is better)
Translates to: LLTKVNRRNIAEFFFSARWYLKP*VKETQE
Trigger: CTCTTGGGTCTCCTTCACTCAGGGTTTCAGATACCA...CCTTGCTGAGAAAAAGAATTCAGCGATATTTCTCCTATTCACTTTTGTAAGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR TCA 90 bp AAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTTTAACTTCAGCAGCCAATaGTGTAGATGTTTGAAGTGG +
Preference number: 4 (lower is better)
Translates to: KLLWSLVARAAKVLSISFNFSSQ*CRCLKW
Trigger: CCACTTCAAACATCTACATCATTGGCTGCTGAAGTT...AAAAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR CCA 90 bp AAAAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTGATTTAATAGTTTCATaGCCTCCATCCTACAGCTCG +
Preference number: 4 (lower is better)
Translates to: KNCCGLWWLGLLKSFLSLDLIVS*PPSYSS
Trigger: CGAGCTGTAGGATGGAGGCCATGAAACTATTAAATC...AAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR CCA 90 bp AAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTTTTGTGAAGTCTTTGTCTaGGAGTTCATAGGTCTCTGT +
Preference number: 4 (lower is better)
Translates to: KLLWSLVARAAKVLSISFCEVFV*EFIGLC
Trigger: ACAGAGACCTATGAACTCCCAGACAAAGACTTCACA...AAAAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR CCA 90 bp AAAAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTAGAGAAAGTGGATCTTaGATTGCTCTTTCCACTGCA +
Preference number: 4 (lower is better)
Translates to: KNCCGLWWLGLLKSFLSLRESGS*IALSTA
Trigger: TGCAGTGGAAAGAGCAATCCAAGATCCACTTTCTCT...AAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641633.2
CDS-3UTR TCA 90 bp AAAAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTTCAGTCCCAGCAAAATaGATTCTGACACTTGAGATT +
Preference number: 4 (lower is better)
Translates to: KNCCGLWWLGLLKSFLSLSVPAK*ILTLEI
Trigger: AATCTCAAGTGTCAGAATTCATTTTGCTGGGACTGA...AAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR GCA 90 bp AAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTTTTGCTCTGTCCCCATTTaGCTTGTGATATTTTATTGC +
Preference number: 4 (lower is better)
Translates to: KLLWSLVARAAKVLSISFCSVPI*LVIFYC
Trigger: GCAATAAAATATCACAAGGCAAATGGGGACAGAGCA...AAAAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR CCA 90 bp CTTCTTACAAAAGTGAATAGGAGAAATATCGCTGAATTCTTTTTCTCAGCAAGGCTTGTGACGGAAGTATaGGTAAGTGCAGAGTTGCAG +
Preference number: 4 (lower is better)
Translates to: LLTKVNRRNIAEFFFSARLVTEV*VSAELQ
Trigger: CTGCAACTCTGCACTTACCCATACTTCCGTCACAAG...CCTTGCTGAGAAAAAGAATTCAGCGATATTTCTCCTATTCACTTTTGTAAGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR CCA 90 bp AAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTTTTATAGATCTGTGGTTTaGGATAGTAATGGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: KLLWSLVARAAKVLSISFYRSVV*DSNGSS
Trigger: ACTGCTGCCATTACTATCCCAAACCACAGATCTATA...AAAAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR CCA 90 bp AAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTTTGGTACTATAGATCTGTaGTTTGGGATAGTAATGGCA +
Preference number: 4 (lower is better)
Translates to: KLLWSLVARAAKVLSISFGTIDL*FGIVMA
Trigger: TGCCATTACTATCCCAAACCACAGATCTATAGTACC...AAAAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR CCA 90 bp AAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTTTAGAAACTGCTTGTGGTaGTTTTGGCATAAATGTCTG +
Preference number: 4 (lower is better)
Translates to: KLLWSLVARAAKVLSISFRNCLW*FWHKCL
Trigger: CAGACATTTATGCCAAAACCACCACAAGCAGTTTCT...AAAAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR CCA 90 bp AAAAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTTTCCCTGTATGTTCTTaGACTTTACTGCACTTCCTT +
Preference number: 4 (lower is better)
Translates to: KNCCGLWWLGLLKSFLSLFPVCS*TLLHFL
Trigger: AAGGAAGTGCAGTAAAGTCCAAGAACATACAGGGAA...AAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR TCA 90 bp AAAAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTCTCTTCTTACAAAAGTaGATAGGAGAAATATCGCTG +
Preference number: 4 (lower is better)
Translates to: KNCCGLWWLGLLKSFLSLLFLQK*IGEISL
Trigger: CAGCGATATTTCTCCTATTCACTTTTGTAAGAAGAG...AAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR TCA 90 bp AAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTTTGAAATCTGGGCACTTTaGAAAAAGAACAGGATAACA +
Preference number: 4 (lower is better)
Translates to: KLLWSLVARAAKVLSISFEIWAL*KKNRIT
Trigger: TGTTATCCTGTTCTTTTTTCAAAGTGCCCAGATTTC...AAAAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR TCA 90 bp CTTCTTACAAAAGTGAATAGGAGAAATATCGCTGAATTCTTTTTCTCAGCAAGGCCTCTGAAGGACAAGTaGGTCTCTGACACCTTTTAT +
Preference number: 4 (lower is better)
Translates to: LLTKVNRRNIAEFFFSARPLKDK*VSDTFY
Trigger: ATAAAAGGTGTCAGAGACTCACTTGTCCTTCAGAGG...CCTTGCTGAGAAAAAGAATTCAGCGATATTTCTCCTATTCACTTTTGTAAGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR TCA 90 bp AAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTTTAACATGATCTCACAGTaGGTGCCAAATCATTTAACT +
Preference number: 4 (lower is better)
Translates to: KLLWSLVARAAKVLSISFNMISQ*VPNHLT
Trigger: AGTTAAATGATTTGGCACTCACTGTGAGATCATGTT...AAAAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR TCA 90 bp AAAAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTAGATGTTTGAAGTGGTaGCAAAAATTGTTGTGGTCT +
Preference number: 4 (lower is better)
Translates to: KNCCGLWWLGLLKSFLSLRCLKW*QKLLWS
Trigger: AGACCACAACAATTTTTGTCACCACTTCAAACATCT...AAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR TCA 90 bp CTTCTTACAAAAGTGAATAGGAGAAATATCGCTGAATTCTTTTTCTCAGCAAGGGATATGCCAGAAAACTaGCTGTGCTTAGTACCTCCA +
Preference number: 4 (lower is better)
Translates to: LLTKVNRRNIAEFFFSARDMPEN*LCLVPP
Trigger: TGGAGGTACTAAGCACAGTCAGTTTTCTGGCATATC...CCTTGCTGAGAAAAAGAATTCAGCGATATTTCTCCTATTCACTTTTGTAAGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR TCA 90 bp AAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTTTTCCAAGACCTCCCTGTaGTTATCAAAATCTATAGAT +
Preference number: 4 (lower is better)
Translates to: KLLWSLVARAAKVLSISFSKTSL*LSKSID
Trigger: ATCTATAGATTTTGATAATCACAGGGAGGTCTTGGA...AAAAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR GCA 90 bp AAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTTTTTAAGCAGATTTCTGTaGATTTGTTGGAGCAGTCAT +
Preference number: 4 (lower is better)
Translates to: KLLWSLVARAAKVLSISFLSRFL*ICWSSH
Trigger: ATGACTGCTCCAACAAATGCACAGAAATCTGCTTAA...AAAAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR CCA 90 bp CTTCTTACAAAAGTGAATAGGAGAAATATCGCTGAATTCTTTTTCTCAGCAAGGAACTTATCTACAGAGTaGTTGCCGAAGGGCCAAATG +
Preference number: 4 (lower is better)
Translates to: LLTKVNRRNIAEFFFSARNLSTE*LPKGQM
Trigger: CATTTGGCCCTTCGGCAACCACTCTGTAGATAAGTT...CCTTGCTGAGAAAAAGAATTCAGCGATATTTCTCCTATTCACTTTTGTAAGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR CCA 90 bp CTTCTTACAAAAGTGAATAGGAGAAATATCGCTGAATTCTTTTTCTCAGCAAGGCCAGACTTCACAGGCTaGTTTCAGTACAGAAAGAAC +
Preference number: 4 (lower is better)
Translates to: LLTKVNRRNIAEFFFSARPDFTG*FQYRKN
Trigger: GTTCTTTCTGTACTGAAACCAGCCTGTGAAGTCTGG...CCTTGCTGAGAAAAAGAATTCAGCGATATTTCTCCTATTCACTTTTGTAAGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR CCA 90 bp AAAAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTGGTGATACTCCCTTTTaGTTTTTGGTGTTTCTTGTT +
Preference number: 4 (lower is better)
Translates to: KNCCGLWWLGLLKSFLSLGDTPF*FLVFLV
Trigger: AACAAGAAACACCAAAAACCAAAAGGGAGTATCACC...AAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR TCA 90 bp CTTCTTACAAAAGTGAATAGGAGAAATATCGCTGAATTCTTTTTCTCAGCAAGGATACCTTCTTGTTCATaGTGGTCATGTAGTGTAGGG +
Preference number: 4 (lower is better)
Translates to: LLTKVNRRNIAEFFFSARIPSCS*WSCSVG
Trigger: CCCTACACTACATGACCATCATGAACAAGAAGGTAT...CCTTGCTGAGAAAAAGAATTCAGCGATATTTCTCCTATTCACTTTTGTAAGAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR TCA 90 bp CTTCTTACAAAAGTGAATAGGAGAAATATCGCTGAATTCTTTTTCTCAGCAAGGAACTTCAGCAGCCAATaGTGTAGATGTTTGAAGTGG +
Preference number: 4 (lower is better)
Translates to: LLTKVNRRNIAEFFFSARNFSSQ*CRCLKW
Trigger: CCACTTCAAACATCTACATCATTGGCTGCTGAAGTT...CCTTGCTGAGAAAAAGAATTCAGCGATATTTCTCCTATTCACTTTTGTAAGAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR GCA 90 bp AAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTTTCTTGTGATATTTTATTaGCTTGTGATGCATGTGATC +
Preference number: 4 (lower is better)
Translates to: KLLWSLVARAAKVLSISFLVIFY*LVMHVI
Trigger: GATCACATGCATCACAAGGCAATAAAATATCACAAG...AAAAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR CCA 90 bp CTTCTTACAAAAGTGAATAGGAGAAATATCGCTGAATTCTTTTTCTCAGCAAGGGATTTAATAGTTTCATaGCCTCCATCCTACAGCTCG +
Preference number: 4 (lower is better)
Translates to: LLTKVNRRNIAEFFFSARDLIVS*PPSYSS
Trigger: CGAGCTGTAGGATGGAGGCCATGAAACTATTAAATC...CCTTGCTGAGAAAAAGAATTCAGCGATATTTCTCCTATTCACTTTTGTAAGAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR CCA 90 bp CTTCTTACAAAAGTGAATAGGAGAAATATCGCTGAATTCTTTTTCTCAGCAAGGTTTCTGTGCATTTGTTaGAGCAGTCATCTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: LLTKVNRRNIAEFFFSARFLCIC*SSHLFQ
Trigger: CTGGAAGAGATGACTGCTCCAACAAATGCACAGAAA...CCTTGCTGAGAAAAAGAATTCAGCGATATTTCTCCTATTCACTTTTGTAAGAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR CCA 90 bp CTTCTTACAAAAGTGAATAGGAGAAATATCGCTGAATTCTTTTTCTCAGCAAGGTGTGAAGTCTTTGTCTaGGAGTTCATAGGTCTCTGT +
Preference number: 4 (lower is better)
Translates to: LLTKVNRRNIAEFFFSARCEVFV*EFIGLC
Trigger: ACAGAGACCTATGAACTCCCAGACAAAGACTTCACA...CCTTGCTGAGAAAAAGAATTCAGCGATATTTCTCCTATTCACTTTTGTAAGAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR CCA 90 bp AAAAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTGATAGTTTTGATCTGTaGTTGATTGAGTCTGTGAAT +
Preference number: 4 (lower is better)
Translates to: KNCCGLWWLGLLKSFLSLDSFDL*LIESVN
Trigger: ATTCACAGACTCAATCAACCACAGATCAAAACTATC...AAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR GCA 90 bp CTTCTTACAAAAGTGAATAGGAGAAATATCGCTGAATTCTTTTTCTCAGCAAGGATATCGAGAAGGGCATaGACCTTCTCAACTTATAGT +
Preference number: 4 (lower is better)
Translates to: LLTKVNRRNIAEFFFSARISRRA*TFSTYS
Trigger: ACTATAAGTTGAGAAGGTGCATGCCCTTCTCGATAT...CCTTGCTGAGAAAAAGAATTCAGCGATATTTCTCCTATTCACTTTTGTAAGAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR GCA 90 bp CTTCTTACAAAAGTGAATAGGAGAAATATCGCTGAATTCTTTTTCTCAGCAAGGCAAACTATAATGGTATaGAAGGTGCAGGTGCTTTTG +
Preference number: 4 (lower is better)
Translates to: LLTKVNRRNIAEFFFSARQTIMV*KVQVLL
Trigger: CAAAAGCACCTGCACCTTGCATACCATTATAGTTTG...CCTTGCTGAGAAAAAGAATTCAGCGATATTTCTCCTATTCACTTTTGTAAGAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR TCA 90 bp CTTCTTACAAAAGTGAATAGGAGAAATATCGCTGAATTCTTTTTCTCAGCAAGGCACTGTTGGCAACAATaGCTACCTGTACAAAATATA +
Preference number: 4 (lower is better)
Translates to: LLTKVNRRNIAEFFFSARHCWQQ*LPVQNI
Trigger: TATATTTTGTACAGGTAGTCATTGTTGCCAACAGTG...CCTTGCTGAGAAAAAGAATTCAGCGATATTTCTCCTATTCACTTTTGTAAGAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR TCA 90 bp CTTCTTACAAAAGTGAATAGGAGAAATATCGCTGAATTCTTTTTCTCAGCAAGGCTCTTCTTACAAAAGTaGATAGGAGAAATATCGCTG +
Preference number: 4 (lower is better)
Translates to: LLTKVNRRNIAEFFFSARLFLQK*IGEISL
Trigger: CAGCGATATTTCTCCTATTCACTTTTGTAAGAAGAG...CCTTGCTGAGAAAAAGAATTCAGCGATATTTCTCCTATTCACTTTTGTAAGAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR TCA 90 bp CTTCTTACAAAAGTGAATAGGAGAAATATCGCTGAATTCTTTTTCTCAGCAAGGGAAATCTGGGCACTTTaGAAAAAGAACAGGATAACA +
Preference number: 4 (lower is better)
Translates to: LLTKVNRRNIAEFFFSAREIWAL*KKNRIT
Trigger: TGTTATCCTGTTCTTTTTTCAAAGTGCCCAGATTTC...CCTTGCTGAGAAAAAGAATTCAGCGATATTTCTCCTATTCACTTTTGTAAGAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR TCA 90 bp CTTCTTACAAAAGTGAATAGGAGAAATATCGCTGAATTCTTTTTCTCAGCAAGGCAATCAATACTCTTGTaGTTTCCTATGCCTGTCTTT +
Preference number: 4 (lower is better)
Translates to: LLTKVNRRNIAEFFFSARQSILL*FPMPVF
Trigger: AAAGACAGGCATAGGAAATCACAAGAGTATTGATTG...CCTTGCTGAGAAAAAGAATTCAGCGATATTTCTCCTATTCACTTTTGTAAGAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR TCA 90 bp CTTCTTACAAAAGTGAATAGGAGAAATATCGCTGAATTCTTTTTCTCAGCAAGGTCCAAGACCTCCCTGTaGTTATCAAAATCTATAGAT +
Preference number: 4 (lower is better)
Translates to: LLTKVNRRNIAEFFFSARSKTSL*LSKSID
Trigger: ATCTATAGATTTTGATAATCACAGGGAGGTCTTGGA...CCTTGCTGAGAAAAAGAATTCAGCGATATTTCTCCTATTCACTTTTGTAAGAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR GCA 90 bp CTTCTTACAAAAGTGAATAGGAGAAATATCGCTGAATTCTTTTTCTCAGCAAGGGTTCTTGGACTTTACTaGACTTCCTTAAGACAATTA +
Preference number: 4 (lower is better)
Translates to: LLTKVNRRNIAEFFFSARVLGLY*TSLRQL
Trigger: TAATTGTCTTAAGGAAGTGCAGTAAAGTCCAAGAAC...CCTTGCTGAGAAAAAGAATTCAGCGATATTTCTCCTATTCACTTTTGTAAGAAG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR CCA 90 bp CTTCTTACAAAAGTGAATAGGAGAAATATCGCTGAATTCTTTTTCTCAGCAAGGGATAGTTTTGATCTGTaGTTGATTGAGTCTGTGAAT +
Preference number: 4 (lower is better)
Translates to: LLTKVNRRNIAEFFFSARDSFDL*LIESVN
Trigger: ATTCACAGACTCAATCAACCACAGATCAAAACTATC...CCTTGCTGAGAAAAAGAATTCAGCGATATTTCTCCTATTCACTTTTGTAAGAAG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR CAA 90 bp GGTGCTTTTGAAATAGCTGGGGACCTTGTGACGGAAGTATGGGTAAGTGCAGAGGGCACTGGGTCCAGCTaGAGAAACTGCTTGTGGTGG +
Preference number: 5 (lower is better)
Translates to: GAFEIAGDLVTEVWVSAEGTGSS*RNCLWW
Trigger: CCACCACAAGCAGTTTCTCAAGCTGGACCCAGTGCC...CTCTGCACTTACCCATACTTCCGTCACAAGGTCCCCAGCTATTTCAAAAGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS CCA 90 bp AGGAAGAAACTGGATGTGGCTGCAGTTCAGAAGAAGTCAGGGCCATaGGTTCAGAGGGGACAATATCGAGAAGGGCATGCACCTTCTCAA +
Preference number: 5 (lower is better)
Translates to: RKKLDVAAVQKKSGP*VQRGQYREGHAPSQ
Trigger: TTGAGAAGGTGCATGCCCTTCTCGATATTGTCCCCTCTGAACCCATGGCCCTGACTTCTTCTGAACTGCAGCCACATCCAGTTTCTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641633.2
CDS-3UTR CAA 90 bp GGTGCTTTTGAAATAGCTGGGGACCTTGTGACGGAAGTATGGGTAAGTGCAGAGGGAACGGGCTTTAGATaGCCCAGTAGGAGAGTGGTT +
Preference number: 5 (lower is better)
Translates to: GAFEIAGDLVTEVWVSAEGTGFR*PSRRVV
Trigger: AACCACTCTCCTACTGGGCAATCTAAAGCCCGTTCC...CTCTGCACTTACCCATACTTCCGTCACAAGGTCCCCAGCTATTTCAAAAGCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR CAA 90 bp AAAAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTCCTGCCTTGGCTCTGTaGCGGGAAGTCAGGGACCCC +
Preference number: 5 (lower is better)
Translates to: KNCCGLWWLGLLKSFLSLPALAL*REVRDP
Trigger: GGGGTCCCTGACTTCCCGCAACAGAGCCAAGGCAGG...AAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR CAA 90 bp GGTGCTTTTGAAATAGCTGGGGACCTTGTGACGGAAGTATGGGTAAGTGCAGAGCAGCTGAGGTTGGCATaGATGAAGATTGTAGGGAAC +
Preference number: 5 (lower is better)
Translates to: GAFEIAGDLVTEVWVSAEQLRLA*MKIVGN
Trigger: GTTCCCTACAATCTTCATCAATGCCAACCTCAGCTG...CTCTGCACTTACCCATACTTCCGTCACAAGGTCCCCAGCTATTTCAAAAGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR CAA 90 bp GGTGCTTTTGAAATAGCTGGGGACCTTGTGACGGAAGTATGGGTAAGTGCAGAGGAGATTATGCCACTGTaGGCAACAATGACTACCTGT +
Preference number: 5 (lower is better)
Translates to: GAFEIAGDLVTEVWVSAEEIMPL*ATMTTC
Trigger: ACAGGTAGTCATTGTTGCCAACAGTGGCATAATCTC...CTCTGCACTTACCCATACTTCCGTCACAAGGTCCCCAGCTATTTCAAAAGCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR CAA 90 bp GGTGCTTTTGAAATAGCTGGGGACCTTGTGACGGAAGTATGGGTAAGTGCAGAGAAAGTGGATCTTGGATaGCTCTTTCCACTGCAGGAA +
Preference number: 5 (lower is better)
Translates to: GAFEIAGDLVTEVWVSAEKVDLG*LFPLQE
Trigger: TTCCTGCAGTGGAAAGAGCAATCCAAGATCCACTTT...CTCTGCACTTACCCATACTTCCGTCACAAGGTCCCCAGCTATTTCAAAAGCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641633.2
CDS-3UTR CAA 90 bp GGTGCTTTTGAAATAGCTGGGGACCTTGTGACGGAAGTATGGGTAAGTGCAGAGAAGAGAAAGTGGATCTaGGATTGCTCTTTCCACTGC +
Preference number: 5 (lower is better)
Translates to: GAFEIAGDLVTEVWVSAEKRKWI*DCSFHC
Trigger: GCAGTGGAAAGAGCAATCCAAGATCCACTTTCTCTT...CTCTGCACTTACCCATACTTCCGTCACAAGGTCCCCAGCTATTTCAAAAGCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641633.2
CDS GCA 90 bp CGATTTACCATGAAGAGAAAGTGGATCTTGGATTGCTCTTTCCACTaGAGGAAGAAACTGGATGTGGCTGCAGTTCAGAAGAAGTCAGGG +
Preference number: 5 (lower is better)
Translates to: RFTMKRKWILDCSFH*RKKLDVAAVQKKSG
Trigger: CCCTGACTTCTTCTGAACTGCAGCCACATCCAGTTTCTTCCTGCAGTGGAAAGAGCAATCCAAGATCCACTTTCTCTTCATGGTAAATCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641633.2
CDS GCA 90 bp TGTTCTCCAAGCCGATTTACCATGAAGAGAAAGTGGATCTTGGATTaGTCTTTCCACTGCAGGAAGAAACTGGATGTGGCTGCAGTTCAG +
Preference number: 5 (lower is better)
Translates to: CSPSRFTMKRKWILD*SFHCRKKLDVAAVQ
Trigger: CTGAACTGCAGCCACATCCAGTTTCTTCCTGCAGTGGAAAGAGCAATCCAAGATCCACTTTCTCTTCATGGTAAATCGGCTTGGAGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641633.2
CDS-3UTR CAA 90 bp AAAAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTCCTGGTCCTGTGATCTaGCTCTGTCCCCATTTGCCT +
Preference number: 5 (lower is better)
Translates to: KNCCGLWWLGLLKSFLSLPGPVI*LCPHLP
Trigger: AGGCAAATGGGGACAGAGCAAGATCACAGGACCAGG...AAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR CAA 90 bp GGTGCTTTTGAAATAGCTGGGGACCTTGTGACGGAAGTATGGGTAAGTGCAGAGCACAAGAAAACCATCTaGGTTCTAGGACTAGAGTTC +
Preference number: 5 (lower is better)
Translates to: GAFEIAGDLVTEVWVSAEHKKTI*VLGLEF
Trigger: GAACTCTAGTCCTAGAACCAAGATGGTTTTCTTGTG...CTCTGCACTTACCCATACTTCCGTCACAAGGTCCCCAGCTATTTCAAAAGCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR CAA 90 bp GGTGCTTTTGAAATAGCTGGGGACCTTGTGACGGAAGTATGGGTAAGTGCAGAGCAGATTTCTGTGCATTaGTTGGAGCAGTCATCTCTT +
Preference number: 5 (lower is better)
Translates to: GAFEIAGDLVTEVWVSAEQISVH*LEQSSL
Trigger: AAGAGATGACTGCTCCAACAAATGCACAGAAATCTG...CTCTGCACTTACCCATACTTCCGTCACAAGGTCCCCAGCTATTTCAAAAGCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR CAA 90 bp GGTGCTTTTGAAATAGCTGGGGACCTTGTGACGGAAGTATGGGTAAGTGCAGAGAGAAAAGAACCTATGTaGAAATATTGGGGGCTGGTT +
Preference number: 5 (lower is better)
Translates to: GAFEIAGDLVTEVWVSAERKEPM*KYWGLV
Trigger: AACCAGCCCCCAATATTTCAACATAGGTTCTTTTCT...CTCTGCACTTACCCATACTTCCGTCACAAGGTCCCCAGCTATTTCAAAAGCACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR CAA 90 bp CTTCTTACAAAAGTGAATAGGAGAAATATCGCTGAATTCTTTTTCTCAGCAAGGCCAAGGCAACCTGCCTaGGCTCTGTTGCGGGAAGTC +
Preference number: 5 (lower is better)
Translates to: LLTKVNRRNIAEFFFSARPRQPA*ALLREV
Trigger: GACTTCCCGCAACAGAGCCAAGGCAGGTTGCCTTGG...CCTTGCTGAGAAAAAGAATTCAGCGATATTTCTCCTATTCACTTTTGTAAGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR CAA 90 bp AAAAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTTCCTACAGCTCGCTCTaGGATGACCTCCCACTGTTT +
Preference number: 5 (lower is better)
Translates to: KNCCGLWWLGLLKSFLSLSYSSL*DDLPLF
Trigger: AAACAGTGGGAGGTCATCCAAGAGCGAGCTGTAGGA...AAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641633.2
CDS-3UTR CAA 90 bp CTTCTTACAAAAGTGAATAGGAGAAATATCGCTGAATTCTTTTTCTCAGCAAGGGGCACTGGGTCCAGCTaGAGAAACTGCTTGTGGTGG +
Preference number: 5 (lower is better)
Translates to: LLTKVNRRNIAEFFFSARGTGSS*RNCLWW
Trigger: CCACCACAAGCAGTTTCTCAAGCTGGACCCAGTGCC...CCTTGCTGAGAAAAAGAATTCAGCGATATTTCTCCTATTCACTTTTGTAAGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR CAA 90 bp GGTGCTTTTGAAATAGCTGGGGACCTTGTGACGGAAGTATGGGTAAGTGCAGAGAGTTTTGATCTGTGGTaGATTGAGTCTGTGAATGTA +
Preference number: 5 (lower is better)
Translates to: GAFEIAGDLVTEVWVSAESFDLW*IESVNV
Trigger: TACATTCACAGACTCAATCAACCACAGATCAAAACT...CTCTGCACTTACCCATACTTCCGTCACAAGGTCCCCAGCTATTTCAAAAGCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR CAA 90 bp AAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTTTCAGCTGAGGTTGGCATaGATGAAGATTGTAGGGAAC +
Preference number: 5 (lower is better)
Translates to: KLLWSLVARAAKVLSISFQLRLA*MKIVGN
Trigger: GTTCCCTACAATCTTCATCAATGCCAACCTCAGCTG...AAAAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR CAA 90 bp AAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTTTCTCCTCCAGCTGAGGTaGGCATTGATGAAGATTGTA +
Preference number: 5 (lower is better)
Translates to: KLLWSLVARAAKVLSISFLLQLR*ALMKIV
Trigger: TACAATCTTCATCAATGCCAACCTCAGCTGGAGGAG...AAAAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS TCA 90 bp TCCAGGACTCCATTTATTTCATTTGTTCTCCAAGCCGATTTACCATaGAGAGAAAGTGGATCTTGGATTGCTCTTTCCACTGCAGGAAGA +
Preference number: 5 (lower is better)
Translates to: SRTPFISFVLQADLP*RESGSWIALSTAGR
Trigger: TCTTCCTGCAGTGGAAAGAGCAATCCAAGATCCACTTTCTCTTCATGGTAAATCGGCTTGGAGAACAAATGAAATAAATGGAGTCCTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641633.2
CDS-3UTR CAA 90 bp CTTCTTACAAAAGTGAATAGGAGAAATATCGCTGAATTCTTTTTCTCAGCAAGGGGAACGGGCTTTAGATaGCCCAGTAGGAGAGTGGTT +
Preference number: 5 (lower is better)
Translates to: LLTKVNRRNIAEFFFSARGTGFR*PSRRVV
Trigger: AACCACTCTCCTACTGGGCAATCTAAAGCCCGTTCC...CCTTGCTGAGAAAAAGAATTCAGCGATATTTCTCCTATTCACTTTTGTAAGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR CAA 90 bp AAAAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTAAATTGTTGTGGTCTTaGGTGGCTAGGGCTGCTAAA +
Preference number: 5 (lower is better)
Translates to: KNCCGLWWLGLLKSFLSLKLLWS*VARAAK
Trigger: TTTAGCAGCCCTAGCCACCAAAGACCACAACAATTT...AAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR CAA 90 bp AAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTTTAAATTGTTGTGGTCTTaGGTGGCTAGGGCTGCTAAA +
Preference number: 5 (lower is better)
Translates to: KLLWSLVARAAKVLSISFKLLWS*VARAAK
Trigger: TTTAGCAGCCCTAGCCACCAAAGACCACAACAATTT...AAAAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR CAA 90 bp CTTCTTACAAAAGTGAATAGGAGAAATATCGCTGAATTCTTTTTCTCAGCAAGGTCCTACAGCTCGCTCTaGGATGACCAGTTCAGAAGA +
Preference number: 5 (lower is better)
Translates to: LLTKVNRRNIAEFFFSARSYSSL*DDQFRR
Trigger: TCTTCTGAACTGGTCATCCAAGAGCGAGCTGTAGGA...CCTTGCTGAGAAAAAGAATTCAGCGATATTTCTCCTATTCACTTTTGTAAGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641386.2
CDS-3UTR CAA 90 bp AAAAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTATTTCTGTGCATTTGTaGGAGCAGTCATCTCTTCCA +
Preference number: 5 (lower is better)
Translates to: KNCCGLWWLGLLKSFLSLISVHL*EQSSLP
Trigger: TGGAAGAGATGACTGCTCCAACAAATGCACAGAAAT...AAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR CAA 90 bp AAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTTTCAGATTTCTGTGCATTaGTTGGAGCAGTCATCTCTT +
Preference number: 5 (lower is better)
Translates to: KLLWSLVARAAKVLSISFQISVH*LEQSSL
Trigger: AAGAGATGACTGCTCCAACAAATGCACAGAAATCTG...AAAAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR CAA 90 bp CTTCTTACAAAAGTGAATAGGAGAAATATCGCTGAATTCTTTTTCTCAGCAAGGCTTCTTTTCCTGACTTaGACCTATCCAGCCCTCCAG +
Preference number: 5 (lower is better)
Translates to: LLTKVNRRNIAEFFFSARLLFLT*TYPALQ
Trigger: CTGGAGGGCTGGATAGGTCAAAGTCAGGAAAAGAAG...CCTTGCTGAGAAAAAGAATTCAGCGATATTTCTCCTATTCACTTTTGTAAGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000641633.2
CDS CCA 90 bp ATTTATTTCATTTGTTCTCCAAGCCGATTTACCATGAAGAGAAAGTaGATCTTGGATTGCTCTTTCCACTGCAGGAAGAAACTGGATGTG +
Preference number: 5 (lower is better)
Translates to: IYFICSPSRFTMKRK*ILDCSFHCRKKLDV
Trigger: CACATCCAGTTTCTTCCTGCAGTGGAAAGAGCAATCCAAGATCCACTTTCTCTTCATGGTAAATCGGCTTGGAGAACAAATGAAATAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641633.2
CDS-3UTR CAA 90 bp AAAAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTTTGCTCTGTCCCCATTaGCCTTGTGATATTTTATTG +
Preference number: 5 (lower is better)
Translates to: KNCCGLWWLGLLKSFLSLLLCPH*PCDILL
Trigger: CAATAAAATATCACAAGGCAAATGGGGACAGAGCAA...AAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR CAA 90 bp CTTCTTACAAAAGTGAATAGGAGAAATATCGCTGAATTCTTTTTCTCAGCAAGGGAGATTATGCCACTGTaGGCAACAATGACTACCTGT +
Preference number: 5 (lower is better)
Translates to: LLTKVNRRNIAEFFFSAREIMPL*ATMTTC
Trigger: ACAGGTAGTCATTGTTGCCAACAGTGGCATAATCTC...CCTTGCTGAGAAAAAGAATTCAGCGATATTTCTCCTATTCACTTTTGTAAGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR CAA 90 bp AAAAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTACTCCCTTTTGGTTTTaGGTGTTTCTTGTTGTCTTA +
Preference number: 5 (lower is better)
Translates to: KNCCGLWWLGLLKSFLSLTPFWF*VFLVVL
Trigger: TAAGACAACAAGAAACACCAAAAACCAAAAGGGAGT...AAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR CAA 90 bp AAATTGTTGTGGTCTTTGGTGGCTAGGGCTGCTAAAGTCCTTTCTATCTCTTTTAGTTTTGATCTGTGGTaGATTGAGTCTGTGAATGTA +
Preference number: 5 (lower is better)
Translates to: KLLWSLVARAAKVLSISFSFDLW*IESVNV
Trigger: TACATTCACAGACTCAATCAACCACAGATCAAAACT...AAAAGAGATAGAAAGGACTTTAGCAGCCCTAGCCACCAAAGACCACAACAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR CAA 90 bp CTTCTTACAAAAGTGAATAGGAGAAATATCGCTGAATTCTTTTTCTCAGCAAGGAGCTTGAGAAACTGCTaGTGGTGGTTTTGGCATAAA +
Preference number: 5 (lower is better)
Translates to: LLTKVNRRNIAEFFFSARSLRNC*WWFWHK
Trigger: TTTATGCCAAAACCACCACAAGCAGTTTCTCAAGCT...CCTTGCTGAGAAAAAGAATTCAGCGATATTTCTCCTATTCACTTTTGTAAGAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR CAA 90 bp CTTCTTACAAAAGTGAATAGGAGAAATATCGCTGAATTCTTTTTCTCAGCAAGGCCTTGTGATATTTTATaGCCTTGTGATGCATGTGAT +
Preference number: 5 (lower is better)
Translates to: LLTKVNRRNIAEFFFSARPCDIL*PCDACD
Trigger: ATCACATGCATCACAAGGCAATAAAATATCACAAGG...CCTTGCTGAGAAAAAGAATTCAGCGATATTTCTCCTATTCACTTTTGTAAGAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS-3UTR CAA 90 bp CTTCTTACAAAAGTGAATAGGAGAAATATCGCTGAATTCTTTTTCTCAGCAAGGACTCCCTTTTGGTTTTaGGTGTTTCTTGTTGTCTTA +
Preference number: 5 (lower is better)
Translates to: LLTKVNRRNIAEFFFSARTPFWF*VFLVVL
Trigger: TAAGACAACAAGAAACACCAAAAACCAAAAGGGAGT...CCTTGCTGAGAAAAAGAATTCAGCGATATTTCTCCTATTCACTTTTGTAAGAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS CCA 72 bp CTGGATGTGGCTGCAGTTCAGAAGAAGTCAGGGCCATaGGTTCAGAGGGGACAATATCGAGAAGGGCATGCA +
Preference number: 6 (lower is better)
Translates to: LDVAAVQKKSGP*VQRGQYREGHA
Trigger: TGCATGCCCTTCTCGATATTGTCCCCTCTGAACCCATGGCCCTGACTTCTTCTGAACTGCAGCCACATCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641633.2
CDS CCA 72 bp ACCGAGAAGAGGGCAAAGAGAAGAAACTCTACATCCTaGGAGCTGGTCAGTCCCAGCAAAATGAATTCTGAC +
Preference number: 6 (lower is better)
Translates to: TEKRAKRRNSTS*ELVSPSKMNSD
Trigger: GTCAGAATTCATTTTGCTGGGACTGACCAGCTCCCAGGATGTAGAGTTTCTTCTCTTTGCCCTCTTCTCGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS CAA 90 bp TTGTTCTCCAAGCCGATTTACCATGAAGAGAAAGTGGATCTTGGATaGCTCTTTCCACTGCAGGAAGAAACTGGATGTGGCTGCAGTTCA +
Preference number: 6 (lower is better)
Translates to: LFSKPIYHEEKVDLG*LFPLQEETGCGCSS
Trigger: TGAACTGCAGCCACATCCAGTTTCTTCCTGCAGTGGAAAGAGCAATCCAAGATCCACTTTCTCTTCATGGTAAATCGGCTTGGAGAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641633.2
CDS GCA 72 bp GCCATGGGTTCAGAGGGGACAATATCGAGAAGGGCATaGACCTTCTCAACTTATAGTTCCATAGAAGAAACA +
Preference number: 6 (lower is better)
Translates to: AMGSEGTISRRA*TFSTYSSIEET
Trigger: TGTTTCTTCTATGGAACTATAAGTTGAGAAGGTGCATGCCCTTCTCGATATTGTCCCCTCTGAACCCATGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641386.2
ENST00000641633.2
CDS GCA 72 bp AGCCGATTTACCATGAAGAGAAAGTGGATCTTGGATTaGTCTTTCCACTGCAGGAAGAAACTGGATGTGGCT +
Preference number: 6 (lower is better)
Translates to: SRFTMKRKWILD*SFHCRKKLDVA
Trigger: AGCCACATCCAGTTTCTTCCTGCAGTGGAAAGAGCAATCCAAGATCCACTTTCTCTTCATGGTAAATCGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641633.2
CDS CAA 90 bp TTCATTTGTTCTCCAAGCCGATTTACCATGAAGAGAAAGTGGATCTaGGATTGCTCTTTCCACTGCAGGAAGAAACTGGATGTGGCTGCA +
Preference number: 6 (lower is better)
Translates to: FICSPSRFTMKRKWI*DCSFHCRKKLDVAA
Trigger: TGCAGCCACATCCAGTTTCTTCCTGCAGTGGAAAGAGCAATCCAAGATCCACTTTCTCTTCATGGTAAATCGGCTTGGAGAACAAATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641633.2
CDS CAA 72 bp TCTCCAAGCCGATTTACCATGAAGAGAAAGTGGATCTaGGATTGCTCTTTCCACTGCAGGAAGAAACTGGAT +
Preference number: 6 (lower is better)
Translates to: SPSRFTMKRKWI*DCSFHCRKKLD
Trigger: ATCCAGTTTCTTCCTGCAGTGGAAAGAGCAATCCAAGATCCACTTTCTCTTCATGGTAAATCGGCTTGGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641633.2
CDS CCA 72 bp ATTTGTTCTCCAAGCCGATTTACCATGAAGAGAAAGTaGATCTTGGATTGCTCTTTCCACTGCAGGAAGAAA +
Preference number: 6 (lower is better)
Translates to: ICSPSRFTMKRK*ILDCSFHCRKK
Trigger: TTTCTTCCTGCAGTGGAAAGAGCAATCCAAGATCCACTTTCTCTTCATGGTAAATCGGCTTGGAGAACAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641633.2
CDS TCA 72 bp CCATTTATTTCATTTGTTCTCCAAGCCGATTTACCATaGAGAGAAAGTGGATCTTGGATTGCTCTTTCCACT +
Preference number: 6 (lower is better)
Translates to: PFISFVLQADLP*RESGSWIALST
Trigger: AGTGGAAAGAGCAATCCAAGATCCACTTTCTCTTCATGGTAAATCGGCTTGGAGAACAAATGAAATAAATGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641633.2