Pregenerated sensors for OR4K14 (Homo sapiens)

Ensembl gene IDs: ENSG00000169484

Ensembl transcript IDs: ENST00000641793.1

Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CAA 90 bp	AACAGCGTCACTACCATGATATGTGCAGAGCAAGTGGAGAGTGCTTaGGATGTGCTACCGGCAGCACGCTGTCTGATAGCGAGGAGGATC	+
Preference number: 6 (lower is better) Translates to: NSVTTMICAEQVESA*DVLPAARCLIARRI Trigger: GATCCTCCTCGCTATCAGACAGCGTGCTGCCGGTAGCACATCCAAAGCACTCTCCACTTGCTCTGCACATATCATGGTAGTGACGCTGTT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641793.1
CDS CAA 72 bp	ACTACCATGATATGTGCAGAGCAAGTGGAGAGTGCTTaGGATGTGCTACCGGCAGCACGCTGTCTGATAGCG	+
Preference number: 6 (lower is better) Translates to: TTMICAEQVESA*DVLPAARCLIA Trigger: CGCTATCAGACAGCGTGCTGCCGGTAGCACATCCAAAGCACTCTCCACTTGCTCTGCACATATCATGGTAGT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641793.1
CDS TCA 72 bp	GCACAAATCCAACGACCCATGAAGCCAGCACCAGCCTaGTGCAAGTCTGCCAACTCATCAAAGTCATGTAAT	+
Preference number: 6 (lower is better) Translates to: AQIQRPMKPAPA*CKSANSSKSCN Trigger: ATTACATGACTTTGATGAGTTGGCAGACTTGCATCAGGCTGGTGCTGGCTTCATGGGTCGTTGGATTTGTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641793.1
CDS TCA 72 bp	AAAACACAGACAGCAGCTTGTCCACAGAGAACCTACTaGAAGGCCGCACATAAACAAAAATGCAAGGGCCAA	+
Preference number: 6 (lower is better) Translates to: KTQTAACPQRTY*KAAHKQKCKGQ Trigger: TTGGCCCTTGCATTTTTGTTTATGTGCGGCCTTTCAGTAGGTTCTCTGTGGACAAGCTGCTGTCTGTGTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000641793.1
CDS CAA 72 bp	CAAATTCTGACACCAAGGAATAGTTCTGTGGGTCCATaGCCTCAGGTTTCAGACTTTGTTTGTAATCTGGAG	+
Preference number: 6 (lower is better) Translates to: QILTPRNSSVGP*PQVSDFVCNLE Trigger: CTCCAGATTACAAACAAAGTCTGAAACCTGAGGCAATGGACCCACAGAACTATTCCTTGGTGTCAGAATTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641793.1
CDS CAA 90 bp	CATGCAACACAAATTCTGACACCAAGGAATAGTTCTGTGGGTCCATaGCCTCAGGTTTCAGACTTTGTTTGTAATCTGGAGTTAAGATGC	+
Preference number: 6 (lower is better) Translates to: HATQILTPRNSSVGP*PQVSDFVCNLELRC Trigger: GCATCTTAACTCCAGATTACAAACAAAGTCTGAAACCTGAGGCAATGGACCCACAGAACTATTCCTTGGTGTCAGAATTTGTGTTGCATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641793.1

---

If you would like us to post a table for your organism of interest, or have questions, please reach out to eerik at stanford dot edu or xjgao at stanford.edu