Pregenerated sensors for OR4F17 (Homo sapiens)
Ensembl gene IDs: ENSG00000176695Ensembl transcript IDs: ENST00000585993.3, ENST00000618231.3, ENST00000641591.1
Found 10 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | TTGCGTATATTGAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTaGTCTTGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCGTTTT | + |
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Preference number: 5 (lower is better) Translates to: LRILNQPCIPGMKPT*SWWISFLMCCWIRF Trigger: AAAACGAATCCAGCAGCACATCAAAAAGCTTATCCACCAAGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAATATACGCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000641591.1 |
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| CDS-3UTR CAA 90 bp | GCAAACTTACTCTTCCACTCACTCCTGATAATGCCCTCATGGATTCTGGGTTGTAAGGCACATTTCACATaGGCAAACTTACTCTTCCAC | + |
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Preference number: 5 (lower is better) Translates to: ANLLFHSLLIMPSWILGCKAHFT*ANLLFH Trigger: GTGGAAGAGTAAGTTTGCCAATGTGAAATGTGCCTT...ACAACCCAGAATCCATGAGGGCATTATCAGGAGTGAGTGGAAGAGTAAGTTTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000585993.3 ENST00000618231.3 |
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| CDS-3UTR CAA 90 bp | GCAAACTTACTCTTCCACTCACTCCTGATAATGCCCTCATGGATTCTGGGTTGTATATCTTTTCCCATATaGCTATCCAATTATCCCACC | + |
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Preference number: 5 (lower is better) Translates to: ANLLFHSLLIMPSWILGCISFPI*LSNYPT Trigger: GGTGGGATAATTGGATAGCAATATGGGAAAAGATAT...ACAACCCAGAATCCATGAGGGCATTATCAGGAGTGAGTGGAAGAGTAAGTTTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000585993.3 ENST00000618231.3 |
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| CDS CAA 72 bp | CCAGCCTTGCATCCCAGGGATGAAGCCCACTTGATCTaGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCG | + |
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Preference number: 6 (lower is better) Translates to: PALHPRDEAHLI*VDKLFDVLLDS Trigger: CGAATCCAGCAGCACATCAAAAAGCTTATCCACCAAGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000641591.1 |
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| CDS TCA 72 bp | TTGAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTaGTCTTGGTGGATAAGCTTTTTGATGTGCTGCTGG | + |
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Preference number: 6 (lower is better) Translates to: LNQPCIPGMKPT*SWWISFLMCCW Trigger: CCAGCAGCACATCAAAAAGCTTATCCACCAAGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000641591.1 |
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| CDS CAA 90 bp | TATATTGAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTGATCTaGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCGTTTTGCCAG | + |
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Preference number: 6 (lower is better) Translates to: YIEPALHPRDEAHLI*VDKLFDVLLDSFCQ Trigger: CTGGCAAAACGAATCCAGCAGCACATCAAAAAGCTTATCCACCAAGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAATATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000641591.1 |
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| CDS CCA 72 bp | AATGAGTTAGGGAGGACTCCCTCTTTTTCTATTGATTaGAATAGTTTCAGAAGGAATGGTACCAGTTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: NELGRTPSFSID*NSFRRNGTSSS Trigger: GGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAGTCCTCCCTAACTCATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000641591.1 |
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| CDS CCA 72 bp | TCTGTTATTGGTCTATTCAGAGATTCAACTTCTTCCTaGTTTAGTCTTGGGAGAGTGTATGTGTCCAGGAAT | + |
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Preference number: 6 (lower is better) Translates to: SVIGLFRDSTSS*FSLGRVYVSRN Trigger: ATTCCTGGACACATACACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641591.1 |
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| CDS CAA 72 bp | CCATCTGGTCCTGGACTCTTTTTGGTTGGTAAGCTATaGATTATTGCCACAATTTCAGCTTCTGTTATTGGT | + |
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Preference number: 6 (lower is better) Translates to: PSGPGLFLVGKL*IIATISASVIG Trigger: ACCAATAACAGAAGCTGAAATTGTGGCAATAATCAATAGCTTACCAACCAAAAAGAGTCCAGGACCAGATGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000641591.1 |
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| CDS CAA 72 bp | GTCTATTCAGAGATTCAACTTCTTCCTGGTTTAGTCTaGGGAGAGTGTATGTGTCCAGGAATTTATCCATTT | + |
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Preference number: 6 (lower is better) Translates to: VYSEIQLLPGLV*GECMCPGIYPF Trigger: AAATGGATAAATTCCTGGACACATACACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641591.1 |
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