RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OR4D9 (Homo sapiens)

Ensembl gene IDs: ENSG00000172742

Ensembl transcript IDs: ENST00000641278.1, ENST00000641962.1

Found 287 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTAGAGAATGTGGAGCCCAAGACGGGAGAAGCCTGCATTTCTGAATaGCAGTGTGGCACTGTGCCCTCTTTCTGCAGACCAGCATTGGCC +
Preference number: 1 (lower is better)
Translates to: LENVEPKTGEACISE*QCGTVPSFCRPALA
Trigger: GGCCAATGCTGGTCTGCAGAAAGAGGGCACAGTGCCACACTGTCATTCAGAAATGCAGGCTTCTCCCGTCTTGGGCTCCACATTCTCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR TCA 90 bp GGATCTAGAGAATGTGGAGCCCAAGACGGGAGAAGCCTGCATTTCTaGATGACAGTGTGGCACTGTGCCCTCTTTCTGCAGACCAGCATT +
Preference number: 1 (lower is better)
Translates to: GSRECGAQDGRSLHF*MTVWHCALFLQTSI
Trigger: AATGCTGGTCTGCAGAAAGAGGGCACAGTGCCACACTGTCATTCAGAAATGCAGGCTTCTCCCGTCTTGGGCTCCACATTCTCTAGATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR TCA 90 bp AATTCTCTCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTaGGGATCTAGAGAATGTGGAGCCCAAGACGGGAGAAGCCTGCAT +
Preference number: 1 (lower is better)
Translates to: NSLSLSPSAGSWTGF*GSRECGAQDGRSLH
Trigger: ATGCAGGCTTCTCCCGTCTTGGGCTCCACATTCTCTAGATCCTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGAGAGAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR GCA 90 bp AGGTCCAGTACCAGTATTCACCCCAAGAGTGTATTACGCCATGGCTaGACTGAGTTCACTGTTACACAAATGTGGCACAATCTCACCTCA +
Preference number: 1 (lower is better)
Translates to: RSSTSIHPKSVLRHG*TEFTVTQMWHNLTS
Trigger: TGAGGTGAGATTGTGCCACATTTGTGTAACAGTGAACTCAGTGCAGCCATGGCGTAATACACTCTTGGGGTGAATACTGGTACTGGACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR TCA 90 bp CAGTACCAGTATTCACCCCAAGAGTGTATTACGCCATGGCTGCACTaGGTTCACTGTTACACAAATGTGGCACAATCTCACCTCATTTTC +
Preference number: 1 (lower is better)
Translates to: QYQYSPQECITPWLH*VHCYTNVAQSHLIF
Trigger: GAAAATGAGGTGAGATTGTGCCACATTTGTGTAACAGTGAACTCAGTGCAGCCATGGCGTAATACACTCTTGGGGTGAATACTGGTACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR CCA 90 bp AGTGTATTACGCCATGGCTGCACTGAGTTCACTGTTACACAAATGTaGCACAATCTCACCTCATTTTCTTTCTTTGCGCATGCTGGTTTC +
Preference number: 1 (lower is better)
Translates to: SVLRHGCTEFTVTQM*HNLTSFSFFAHAGF
Trigger: GAAACCAGCATGCGCAAAGAAAGAAAATGAGGTGAGATTGTGCCACATTTGTGTAACAGTGAACTCAGTGCAGCCATGGCGTAATACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR TCA 90 bp TCACTAACAGCATTATTTCCTTCTCCTAGGAGGAAATTATGTCCTTaGAGTGAATTGGGGATCCTCTCTCCTCAACAGAAATCATGGGCT +
Preference number: 1 (lower is better)
Translates to: SLTALFPSPRRKLCP*SELGILSPQQKSWA
Trigger: AGCCCATGATTTCTGTTGAGGAGAGAGGATCCCCAATTCACTTCAAGGACATAATTTCCTCCTAGGAGAAGGAAATAATGCTGTTAGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR TCA 90 bp CCCATGGTGTATAATGTATCACATTTTCTTCATCTAGTCCACCATTaGTGGGCACCTAGGCTGATTCCTTGTCTTTGCTACTGTGAACAT +
Preference number: 1 (lower is better)
Translates to: PMVYNVSHFLHLVHH*WAPRLIPCLCYCEH
Trigger: ATGTTCACAGTAGCAAAGACAAGGAATCAGCCTAGGTGCCCATCAATGGTGGACTAGATGAAGAAAATGTGATACATTATACACCATGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR TCA 90 bp AATCGAACTTGTTTACAACAAGCCCATGAAAAGTTTGGGAATAAGTaGGAGTTGCTTTCTATGAGGATTGTCTTCTTGGCCTATCTTCTT +
Preference number: 1 (lower is better)
Translates to: NRTCLQQAHEKFGNK*ELLSMRIVFLAYLL
Trigger: AAGAAGATAGGCCAAGAAGACAATCCTCATAGAAAGCAACTCTCACTTATTCCCAAACTTTTCATGGGCTTGTTGTAAACAAGTTCGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR GCA 90 bp GTGGCTAACTACTTAGACCGTGGACATTTTTGTTGCAGTGGTTGGCCTACTCTGTGCTTCCCGGGTTCATaGCATTCTCCCGCCTCAGCC +
Preference number: 2 (lower is better)
Translates to: VANYLDRGHFCCSGWPTLCFPGS*HSPASA
Trigger: GGCTGAGGCGGGAGAATGGCATGAACCCGGGAAGCA...CAGAGTAGGCCAACCACTGCAACAAAAATGTCCACGGTCTAAGTAGTTAGCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR TCA 90 bp GTTAGTTACATACATATACATGTGCCATGCTGGTGTGCTGTGCCCATTAACTCGGGCTCGCTGCACCCTTaGCTTCCCCAGGCTCAAGTG +
Preference number: 2 (lower is better)
Translates to: VSYIHIHVPCWCAVPINSGSLHP*LPQAQV
Trigger: CACTTGAGCCTGGGGAAGTCAAGGGTGCAGCGAGCC...CGAGTTAATGGGCACAGCACACCAGCATGGCACATGTATATGTATGTAACTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR CCA 90 bp TCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGGATCTAGAGAATAGCCTCCCCAGTAGCTaGGACTACAGGCACCCACCA +
Preference number: 2 (lower is better)
Translates to: SPFLHLLDHGQDSEDLENSLPSS*DYRHPP
Trigger: TGGTGGGTGCCTGTAGTCCCAGCTACTGGGGAGGCT...ATTCTCTAGATCCTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR TCA 90 bp TCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGGATCTAGAGAATTGGTCAGGCTGGTCTTaGACTCCCGACCTCAGGTCA +
Preference number: 2 (lower is better)
Translates to: SPFLHLLDHGQDSEDLENWSGWS*TPDLRS
Trigger: TGACCTGAGGTCGGGAGTTCAAGACCAGCCTGACCA...ATTCTCTAGATCCTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR TCA 90 bp TTCTTAATTCTCTCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGGATCTCCTGACCTTGTaGTCCACCCGCCTTGGCCTC +
Preference number: 2 (lower is better)
Translates to: FLILSPFLHLLDHGQDSEDLLTL*STRLGL
Trigger: GAGGCCAAGGCGGGTGGATCACAAGGTCAGGAGATC...CTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGAGAGAATTAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR CCA 90 bp GTGGCTAACTACTTAGACCGTGGACATTTTTGTTGCAGTGGTTGGCCTACTCTGAGCCTTCCGAGTAGCTaGGATTACAGGCATGCGCCA +
Preference number: 2 (lower is better)
Translates to: VANYLDRGHFCCSGWPTLSLPSS*DYRHAP
Trigger: TGGCGCATGCCTGTAATCCCAGCTACTCGGAAGGCT...CAGAGTAGGCCAACCACTGCAACAAAAATGTCCACGGTCTAAGTAGTTAGCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR CCA 90 bp TTCTTAATTCTCTCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGAGCCTCCCCAGTAGCTaGGACTACAGGCACCCACCA +
Preference number: 2 (lower is better)
Translates to: FLILSPFLHLLDHGQDSESLPSS*DYRHPP
Trigger: TGGTGGGTGCCTGTAGTCCCAGCTACTGGGGAGGCT...CTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGAGAGAATTAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR CAA 90 bp CACACTCTTCCCACCCTCCTCCCCTCAAGTAGGCCTCAGTGTCTTTaGTTCCCATCTTTGTGTCCATGTGTAAATCGATGGTTAGCTCTC +
Preference number: 2 (lower is better)
Translates to: HTLPTLLPSSRPQCL*FPSLCPCVNRWLAL
Trigger: GAGAGCTAACCATCGATTTACACATGGACACAAAGATGGGAACAAAAGACACTGAGGCCTACTTGAGGGGAGGAGGGTGGGAAGAGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR TCA 90 bp TCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGGATCTAGAGAATGCCTGCATTTCTGAATaGCAGTGTGGCACTGTGCCC +
Preference number: 2 (lower is better)
Translates to: SPFLHLLDHGQDSEDLENACISE*QCGTVP
Trigger: GGGCACAGTGCCACACTGTCATTCAGAAATGCAGGC...ATTCTCTAGATCCTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR TCA 90 bp GTTAGTTACATACATATACATGTGCCATGCTGGTGTGCTGTGCCCATTAACTCGCCCAGCTCAGTCTCCTaGGTAGCTAGGACTACAGGC +
Preference number: 2 (lower is better)
Translates to: VSYIHIHVPCWCAVPINSPSSVS*VARTTG
Trigger: GCCTGTAGTCCTAGCTACTCAGGAGACTGAGCTGGG...CGAGTTAATGGGCACAGCACACCAGCATGGCACATGTATATGTATGTAACTAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR GCA 90 bp GTTAGTTACATACATATACATGTGCCATGCTGGTGTGCTGTGCCCATTAACTCGCTCAGGTCATCTGCCTaGCTTGGCCTCCCAAAGTGC +
Preference number: 2 (lower is better)
Translates to: VSYIHIHVPCWCAVPINSLRSSA*LGLPKC
Trigger: GCACTTTGGGAGGCCAAGGCAGGCAGATGACCTGAG...CGAGTTAATGGGCACAGCACACCAGCATGGCACATGTATATGTATGTAACTAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR GCA 90 bp TCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGGATCTAGAGAATGTGATCTCAGCTTACTaGAACCTCTGCCTCCCGGGT +
Preference number: 2 (lower is better)
Translates to: SPFLHLLDHGQDSEDLENVISAY*NLCLPG
Trigger: ACCCGGGAGGCAGAGGTTGCAGTAAGCTGAGATCAC...ATTCTCTAGATCCTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR GCA 90 bp GTGGCTAACTACTTAGACCGTGGACATTTTTGTTGCAGTGGTTGGCCTACTCTGAGCCTCAACCTCTCCTaGCTCAGTCTCTCAAGTAGC +
Preference number: 2 (lower is better)
Translates to: VANYLDRGHFCCSGWPTLSLNLS*LSLSSS
Trigger: GCTACTTGAGAGACTGAGGCAGGAGAGGTTGAGGCT...CAGAGTAGGCCAACCACTGCAACAAAAATGTCCACGGTCTAAGTAGTTAGCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR TCA 90 bp GTGGCTAACTACTTAGACCGTGGACATTTTTGTTGCAGTGGTTGGCCTACTCTGTGGAGTGTGATGGTGTaGTCTCAGCTTACTGCAACC +
Preference number: 2 (lower is better)
Translates to: VANYLDRGHFCCSGWPTLWSVMV*SQLTAT
Trigger: GGTTGCAGTAAGCTGAGATCACACCATCACACTCCA...CAGAGTAGGCCAACCACTGCAACAAAAATGTCCACGGTCTAAGTAGTTAGCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR TCA 90 bp TGGGCTTGCATTGTTCAGGTGGTCATAAATGGAGTTATTCTTCCCAACTTTTCTGATCTCCTGACCTTGTaGTCCACCCGCCTTGGCCTC +
Preference number: 2 (lower is better)
Translates to: WACIVQVVINGVILPNFSDLLTL*STRLGL
Trigger: GAGGCCAAGGCGGGTGGATCACAAGGTCAGGAGATC...AGAAAAGTTGGGAAGAATAACTCCATTTATGACCACCTGAACAATGCAAGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR TCA 90 bp TTCTTAATTCTCTCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGGCCTGCATTTCTGAATaGCAGTGTGGCACTGTGCCC +
Preference number: 2 (lower is better)
Translates to: FLILSPFLHLLDHGQDSEACISE*QCGTVP
Trigger: GGGCACAGTGCCACACTGTCATTCAGAAATGCAGGC...CTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGAGAGAATTAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR GCA 90 bp GTTAGTTACATACATATACATGTGCCATGCTGGTGTGCTGTGCCCATTAACTCGGTGATCTCAGCTTACTaGAACCTCTGCCTCCCGGGT +
Preference number: 2 (lower is better)
Translates to: VSYIHIHVPCWCAVPINSVISAY*NLCLPG
Trigger: ACCCGGGAGGCAGAGGTTGCAGTAAGCTGAGATCAC...CGAGTTAATGGGCACAGCACACCAGCATGGCACATGTATATGTATGTAACTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR GCA 90 bp TTTCTCAAAATCAAAGGAGCTGTCCACAGCCTCAACAGTGATTCTTCTCCTTTTTGCTTCCCGGGTTCATaGCATTCTCCCGCCTCAGCC +
Preference number: 2 (lower is better)
Translates to: FLKIKGAVHSLNSDSSPFCFPGS*HSPASA
Trigger: GGCTGAGGCGGGAGAATGGCATGAACCCGGGAAGCA...AAAAGGAGAAGAATCACTGTTGAGGCTGTGGACAGCTCCTTTGATTTTGAGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR GCA 90 bp GTTAGTTACATACATATACATGTGCCATGCTGGTGTGCTGTGCCCATTAACTCGGACAGTGTGGCACTGTaGCCTCTTTCTGCAGACCAG +
Preference number: 2 (lower is better)
Translates to: VSYIHIHVPCWCAVPINSDSVAL*PLSADQ
Trigger: CTGGTCTGCAGAAAGAGGGCACAGTGCCACACTGTC...CGAGTTAATGGGCACAGCACACCAGCATGGCACATGTATATGTATGTAACTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR CCA 90 bp GTTAGTTACATACATATACATGTGCCATGCTGGTGTGCTGTGCCCATTAACTCGAGCCTTCCGAGTAGCTaGGATTACAGGCATGCGCCA +
Preference number: 2 (lower is better)
Translates to: VSYIHIHVPCWCAVPINSSLPSS*DYRHAP
Trigger: TGGCGCATGCCTGTAATCCCAGCTACTCGGAAGGCT...CGAGTTAATGGGCACAGCACACCAGCATGGCACATGTATATGTATGTAACTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR TCA 90 bp TTTCTCAAAATCAAAGGAGCTGTCCACAGCCTCAACAGTGATTCTTCTCCTTTTTGGTCAGGCTGGTCTTaGACTCCCGACCTCAGGTCA +
Preference number: 2 (lower is better)
Translates to: FLKIKGAVHSLNSDSSPFWSGWS*TPDLRS
Trigger: TGACCTGAGGTCGGGAGTTCAAGACCAGCCTGACCA...AAAAGGAGAAGAATCACTGTTGAGGCTGTGGACAGCTCCTTTGATTTTGAGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR TCA 90 bp TGGGCTTGCATTGTTCAGGTGGTCATAAATGGAGTTATTCTTCCCAACTTTTCTACTCTTGGGCTCAAGTaGTCCCTCCACCTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: WACIVQVVINGVILPNFSTLGLK*SLHLSL
Trigger: GAGGCTGAGGTGGAGGGATCACTTGAGCCCAAGAGT...AGAAAAGTTGGGAAGAATAACTCCATTTATGACCACCTGAACAATGCAAGCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR TCA 90 bp GTGGCTAACTACTTAGACCGTGGACATTTTTGTTGCAGTGGTTGGCCTACTCTGTGCGCCCGGCAACAGTaGTTCTTCTTTATGAACACT +
Preference number: 2 (lower is better)
Translates to: VANYLDRGHFCCSGWPTLCARQQ*FFFMNT
Trigger: AGTGTTCATAAAGAAGAATCACTGTTGCCGGGCGCA...CAGAGTAGGCCAACCACTGCAACAAAAATGTCCACGGTCTAAGTAGTTAGCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR TCA 90 bp GTTAGTTACATACATATACATGTGCCATGCTGGTGTGCTGTGCCCATTAACTCGACAGTCCCTAGAGTGTaGTGTTCCCCTTCCTGTGTC +
Preference number: 2 (lower is better)
Translates to: VSYIHIHVPCWCAVPINSTVPRV*CSPSCV
Trigger: GACACAGGAAGGGGAACATCACACTCTAGGGACTGT...CGAGTTAATGGGCACAGCACACCAGCATGGCACATGTATATGTATGTAACTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR GCA 90 bp TTTCTCAAAATCAAAGGAGCTGTCCACAGCCTCAACAGTGATTCTTCTCCTTTTCTCAGGTCATCTGCCTaGCTTGGCCTCCCAAAGTGC +
Preference number: 2 (lower is better)
Translates to: FLKIKGAVHSLNSDSSPFLRSSA*LGLPKC
Trigger: GCACTTTGGGAGGCCAAGGCAGGCAGATGACCTGAG...AAAAGGAGAAGAATCACTGTTGAGGCTGTGGACAGCTCCTTTGATTTTGAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR GCA 90 bp TTCTTAATTCTCTCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGAGCCTCAACCTCTCCTaGCTCAGTCTCTCAAGTAGC +
Preference number: 2 (lower is better)
Translates to: FLILSPFLHLLDHGQDSESLNLS*LSLSSS
Trigger: GCTACTTGAGAGACTGAGGCAGGAGAGGTTGAGGCT...CTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGAGAGAATTAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR TCA 90 bp GTGGCTAACTACTTAGACCGTGGACATTTTTGTTGCAGTGGTTGGCCTACTCTGATTATGTCCTTGAAGTaGATTGGGGATCCTCTCTCC +
Preference number: 2 (lower is better)
Translates to: VANYLDRGHFCCSGWPTLIMSLK*IGDPLS
Trigger: GGAGAGAGGATCCCCAATTCACTTCAAGGACATAAT...CAGAGTAGGCCAACCACTGCAACAAAAATGTCCACGGTCTAAGTAGTTAGCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR TCA 90 bp GTTAGTTACATACATATACATGTGCCATGCTGGTGTGCTGTGCCCATTAACTCGCAGTTGCTTCCCATTTaGGAGCTTGGCATCTGCCTT +
Preference number: 2 (lower is better)
Translates to: VSYIHIHVPCWCAVPINSQLLPI*ELGICL
Trigger: AAGGCAGATGCCAAGCTCTCAAATGGGAAGCAACTG...CGAGTTAATGGGCACAGCACACCAGCATGGCACATGTATATGTATGTAACTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR TCA 90 bp TCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGGATCTAGAGAATGTGGTTGGCCTACTCTaGTTGATAAATGTGTGCCAG +
Preference number: 2 (lower is better)
Translates to: SPFLHLLDHGQDSEDLENVVGLL*LINVCQ
Trigger: CTGGCACACATTTATCAATCAGAGTAGGCCAACCAC...ATTCTCTAGATCCTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR TCA 90 bp TCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGGATCTAGAGAATACCAGCATTGGCCTGTaGCATGAGCAAGAAGTAAAC +
Preference number: 2 (lower is better)
Translates to: SPFLHLLDHGQDSEDLENTSIGL*HEQEVN
Trigger: GTTTACTTCTTGCTCATGTCACAGGCCAATGCTGGT...ATTCTCTAGATCCTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR TCA 90 bp GTTAGTTACATACATATACATGTGCCATGCTGGTGTGCTGTGCCCATTAACTCGGATGGGCACCTAGGCTaGTTCCTTGTCTTTGCTACT +
Preference number: 2 (lower is better)
Translates to: VSYIHIHVPCWCAVPINSDGHLG*FLVFAT
Trigger: AGTAGCAAAGACAAGGAATCAGCCTAGGTGCCCATC...CGAGTTAATGGGCACAGCACACCAGCATGGCACATGTATATGTATGTAACTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR CCA 90 bp GTTAGTTACATACATATACATGTGCCATGCTGGTGTGCTGTGCCCATTAACTCGCTGGTCTTGAACTCTTaGGCTCAAGTGATCCCTCCA +
Preference number: 2 (lower is better)
Translates to: VSYIHIHVPCWCAVPINSLVLNS*AQVIPP
Trigger: TGGAGGGATCACTTGAGCCCAAGAGTTCAAGACCAG...CGAGTTAATGGGCACAGCACACCAGCATGGCACATGTATATGTATGTAACTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR CCA 90 bp TCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGGATCTAGAGAATAGTCTCTCAAGTAGCTaGGACTACAGGTGTGCATCA +
Preference number: 2 (lower is better)
Translates to: SPFLHLLDHGQDSEDLENSLSSS*DYRCAS
Trigger: TGATGCACACCTGTAGTCCCAGCTACTTGAGAGACT...ATTCTCTAGATCCTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR TCA 90 bp GTGGCTAACTACTTAGACCGTGGACATTTTTGTTGCAGTGGTTGGCCTACTCTGTCTTTGTTTTGGGCATaGACAAGCTCCTTTCCCATT +
Preference number: 2 (lower is better)
Translates to: VANYLDRGHFCCSGWPTLSLFWA*TSSFPI
Trigger: AATGGGAAAGGAGCTTGTTCATGCCCAAAACAAAGA...CAGAGTAGGCCAACCACTGCAACAAAAATGTCCACGGTCTAAGTAGTTAGCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR TCA 90 bp GTGGCTAACTACTTAGACCGTGGACATTTTTGTTGCAGTGGTTGGCCTACTCTGCTTTTTGCAGCAATCTaGATCCCAGTACTTTCAGAC +
Preference number: 2 (lower is better)
Translates to: VANYLDRGHFCCSGWPTLLFAAI*IPVLSD
Trigger: GTCTGAAAGTACTGGGATTCAGATTGCTGCAAAAAG...CAGAGTAGGCCAACCACTGCAACAAAAATGTCCACGGTCTAAGTAGTTAGCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR TCA 90 bp GTTAGTTACATACATATACATGTGCCATGCTGGTGTGCTGTGCCCATTAACTCGGTGGTTGGCCTACTCTaGTTGATAAATGTGTGCCAG +
Preference number: 2 (lower is better)
Translates to: VSYIHIHVPCWCAVPINSVVGLL*LINVCQ
Trigger: CTGGCACACATTTATCAATCAGAGTAGGCCAACCAC...CGAGTTAATGGGCACAGCACACCAGCATGGCACATGTATATGTATGTAACTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR TCA 90 bp TTCTTAATTCTCTCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGACCAGCATTGGCCTGTaGCATGAGCAAGAAGTAAAC +
Preference number: 2 (lower is better)
Translates to: FLILSPFLHLLDHGQDSETSIGL*HEQEVN
Trigger: GTTTACTTCTTGCTCATGTCACAGGCCAATGCTGGT...CTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGAGAGAATTAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR GCA 90 bp TTCTTAATTCTCTCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGCGTGGACATTTTTGTTaGAGTGGTTGGCCTACTCTG +
Preference number: 2 (lower is better)
Translates to: FLILSPFLHLLDHGQDSERGHFC*SGWPTL
Trigger: CAGAGTAGGCCAACCACTGCAACAAAAATGTCCACG...CTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGAGAGAATTAAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR GCA 90 bp GTTAGTTACATACATATACATGTGCCATGCTGGTGTGCTGTGCCCATTAACTCGCGTGGACATTTTTGTTaGAGTGGTTGGCCTACTCTG +
Preference number: 2 (lower is better)
Translates to: VSYIHIHVPCWCAVPINSRGHFC*SGWPTL
Trigger: CAGAGTAGGCCAACCACTGCAACAAAAATGTCCACG...CGAGTTAATGGGCACAGCACACCAGCATGGCACATGTATATGTATGTAACTAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR CCA 90 bp TCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGGATCTAGAGAATGCAGTATCATCCACGTaGTCCCCAACATATATGATG +
Preference number: 2 (lower is better)
Translates to: SPFLHLLDHGQDSEDLENAVSST*SPTYMM
Trigger: CATCATATATGTTGGGGACCACGTGGATGATACTGC...ATTCTCTAGATCCTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR CCA 90 bp GTTAGTTACATACATATACATGTGCCATGCTGGTGTGCTGTGCCCATTAACTCGTTTGGGAGGCTGAAGTaGAGGGATCATTTGAGTCCA +
Preference number: 2 (lower is better)
Translates to: VSYIHIHVPCWCAVPINSFGRLK*RDHLSP
Trigger: TGGACTCAAATGATCCCTCCACTTCAGCCTCCCAAA...CGAGTTAATGGGCACAGCACACCAGCATGGCACATGTATATGTATGTAACTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR TCA 90 bp TCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGGATCTAGAGAATTCTTTGTTTTGGGCATaGACAAGCTCCTTTCCCATT +
Preference number: 2 (lower is better)
Translates to: SPFLHLLDHGQDSEDLENSLFWA*TSSFPI
Trigger: AATGGGAAAGGAGCTTGTTCATGCCCAAAACAAAGA...ATTCTCTAGATCCTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR TCA 90 bp GTGGCTAACTACTTAGACCGTGGACATTTTTGTTGCAGTGGTTGGCCTACTCTGATGCCTCCAGGAAGGTaGCTACATTTAATCTTTTTG +
Preference number: 2 (lower is better)
Translates to: VANYLDRGHFCCSGWPTLMPPGR*LHLIFL
Trigger: CAAAAAGATTAAATGTAGTCACCTTCCTGGAGGCAT...CAGAGTAGGCCAACCACTGCAACAAAAATGTCCACGGTCTAAGTAGTTAGCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR TCA 90 bp TTTCTCAAAATCAAAGGAGCTGTCCACAGCCTCAACAGTGATTCTTCTCCTTTTTGGAGTGTGATGGTGTaGTCTCAGCTTACTGCAACC +
Preference number: 2 (lower is better)
Translates to: FLKIKGAVHSLNSDSSPFWSVMV*SQLTAT
Trigger: GGTTGCAGTAAGCTGAGATCACACCATCACACTCCA...AAAAGGAGAAGAATCACTGTTGAGGCTGTGGACAGCTCCTTTGATTTTGAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR TCA 90 bp TTCTTAATTCTCTCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGATTATGTCCTTGAAGTaGATTGGGGATCCTCTCTCC +
Preference number: 2 (lower is better)
Translates to: FLILSPFLHLLDHGQDSEIMSLK*IGDPLS
Trigger: GGAGAGAGGATCCCCAATTCACTTCAAGGACATAAT...CTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGAGAGAATTAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR TCA 90 bp GTTAGTTACATACATATACATGTGCCATGCTGGTGTGCTGTGCCCATTAACTCGTCCCAGGGTTTACCTTaGTCATTTCCCTCTTCCTTT +
Preference number: 2 (lower is better)
Translates to: VSYIHIHVPCWCAVPINSSQGLP*SFPSSF
Trigger: AAAGGAAGAGGGAAATGATCAAGGTAAACCCTGGGA...CGAGTTAATGGGCACAGCACACCAGCATGGCACATGTATATGTATGTAACTAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR GCA 90 bp TTCTTAATTCTCTCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGGTATTACGCCATGGCTaGACTGAGTTCACTGTTACA +
Preference number: 2 (lower is better)
Translates to: FLILSPFLHLLDHGQDSEVLRHG*TEFTVT
Trigger: TGTAACAGTGAACTCAGTGCAGCCATGGCGTAATAC...CTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGAGAGAATTAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR GCA 90 bp TCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGGATCTAGAGAATCAGAAATCATGGGCTTaGATTGTTCAGGTGGTCATA +
Preference number: 2 (lower is better)
Translates to: SPFLHLLDHGQDSEDLENQKSWA*IVQVVI
Trigger: TATGACCACCTGAACAATGCAAGCCCATGATTTCTG...ATTCTCTAGATCCTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR GCA 90 bp GTTAGTTACATACATATACATGTGCCATGCTGGTGTGCTGTGCCCATTAACTCGTATCTCATGGAACCCTaGCCTTCTAGTCTACTGTCA +
Preference number: 2 (lower is better)
Translates to: VSYIHIHVPCWCAVPINSYLMEP*PSSLLS
Trigger: TGACAGTAGACTAGAAGGGCAGGGTTCCATGAGATA...CGAGTTAATGGGCACAGCACACCAGCATGGCACATGTATATGTATGTAACTAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR CCA 90 bp GTTAGTTACATACATATACATGTGCCATGCTGGTGTGCTGTGCCCATTAACTCGGCAGTATCATCCACGTaGTCCCCAACATATATGATG +
Preference number: 2 (lower is better)
Translates to: VSYIHIHVPCWCAVPINSAVSST*SPTYMM
Trigger: CATCATATATGTTGGGGACCACGTGGATGATACTGC...CGAGTTAATGGGCACAGCACACCAGCATGGCACATGTATATGTATGTAACTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR CCA 90 bp TTTCTCAAAATCAAAGGAGCTGTCCACAGCCTCAACAGTGATTCTTCTCCTTTTCTGGTCTTGAACTCTTaGGCTCAAGTGATCCCTCCA +
Preference number: 2 (lower is better)
Translates to: FLKIKGAVHSLNSDSSPFLVLNS*AQVIPP
Trigger: TGGAGGGATCACTTGAGCCCAAGAGTTCAAGACCAG...AAAAGGAGAAGAATCACTGTTGAGGCTGTGGACAGCTCCTTTGATTTTGAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR CCA 90 bp GTTAGTTACATACATATACATGTGCCATGCTGGTGTGCTGTGCCCATTAACTCGCCTCAACAGAAATCATaGGCTTGCATTGTTCAGGTG +
Preference number: 2 (lower is better)
Translates to: VSYIHIHVPCWCAVPINSPQQKS*ACIVQV
Trigger: CACCTGAACAATGCAAGCCCATGATTTCTGTTGAGG...CGAGTTAATGGGCACAGCACACCAGCATGGCACATGTATATGTATGTAACTAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR CCA 90 bp GTTAGTTACATACATATACATGTGCCATGCTGGTGTGCTGTGCCCATTAACTCGGTGTGCCAGCTGCTATaGCTTGAGCTTTATCATAGT +
Preference number: 2 (lower is better)
Translates to: VSYIHIHVPCWCAVPINSVCQLL*LELYHS
Trigger: ACTATGATAAAGCTCAAGCCATAGCAGCTGGCACAC...CGAGTTAATGGGCACAGCACACCAGCATGGCACATGTATATGTATGTAACTAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR TCA 90 bp TTCTTAATTCTCTCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGAGGAAATTATGTCCTTaGAGTGAATTGGGGATCCTC +
Preference number: 2 (lower is better)
Translates to: FLILSPFLHLLDHGQDSERKLCP*SELGIL
Trigger: GAGGATCCCCAATTCACTTCAAGGACATAATTTCCT...CTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGAGAGAATTAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR TCA 90 bp TTTCTCAAAATCAAAGGAGCTGTCCACAGCCTCAACAGTGATTCTTCTCCTTTTTGCGCCCGGCAACAGTaGTTCTTCTTTATGAACACT +
Preference number: 2 (lower is better)
Translates to: FLKIKGAVHSLNSDSSPFCARQQ*FFFMNT
Trigger: AGTGTTCATAAAGAAGAATCACTGTTGCCGGGCGCA...AAAAGGAGAAGAATCACTGTTGAGGCTGTGGACAGCTCCTTTGATTTTGAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR TCA 90 bp TTCTTAATTCTCTCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGTACCTTCTAATAGATTaGGTGGCACAGGTAAAGGAG +
Preference number: 2 (lower is better)
Translates to: FLILSPFLHLLDHGQDSEYLLID*VAQVKE
Trigger: CTCCTTTACCTGTGCCACTCAATCTATTAGAAGGTA...CTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGAGAGAATTAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR TCA 90 bp GTTAGTTACATACATATACATGTGCCATGCTGGTGTGCTGTGCCCATTAACTCGTTGTCTTTGCTACTGTaGACATACAGGTGCATGTGT +
Preference number: 2 (lower is better)
Translates to: VSYIHIHVPCWCAVPINSLSLLL*TYRCMC
Trigger: ACACATGCACCTGTATGTTCACAGTAGCAAAGACAA...CGAGTTAATGGGCACAGCACACCAGCATGGCACATGTATATGTATGTAACTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR GCA 90 bp TTCTTAATTCTCTCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGCAGAAATCATGGGCTTaGATTGTTCAGGTGGTCATA +
Preference number: 2 (lower is better)
Translates to: FLILSPFLHLLDHGQDSEQKSWA*IVQVVI
Trigger: TATGACCACCTGAACAATGCAAGCCCATGATTTCTG...CTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGAGAGAATTAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR CCA 90 bp TTTCTCAAAATCAAAGGAGCTGTCCACAGCCTCAACAGTGATTCTTCTCCTTTTAGTCTCTCAAGTAGCTaGGACTACAGGTGTGCATCA +
Preference number: 2 (lower is better)
Translates to: FLKIKGAVHSLNSDSSPFSLSSS*DYRCAS
Trigger: TGATGCACACCTGTAGTCCCAGCTACTTGAGAGACT...AAAAGGAGAAGAATCACTGTTGAGGCTGTGGACAGCTCCTTTGATTTTGAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR CCA 90 bp GTGGCTAACTACTTAGACCGTGGACATTTTTGTTGCAGTGGTTGGCCTACTCTGTCAGGTGGTCATAAATaGAGTTATTCTTCCCAACTT +
Preference number: 2 (lower is better)
Translates to: VANYLDRGHFCCSGWPTLSGGHK*SYSSQL
Trigger: AAGTTGGGAAGAATAACTCCATTTATGACCACCTGA...CAGAGTAGGCCAACCACTGCAACAAAAATGTCCACGGTCTAAGTAGTTAGCCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR GCA 90 bp GTGGCTAACTACTTAGACCGTGGACATTTTTGTTGCAGTGGTTGGCCTACTCTGACATGTTGTTTTCCTTaGTTGGATTGTTCTTTTCTG +
Preference number: 2 (lower is better)
Translates to: VANYLDRGHFCCSGWPTLTCCFP*LDCSFL
Trigger: CAGAAAAGAACAATCCAAGCAAGGAAAACAACATGT...CAGAGTAGGCCAACCACTGCAACAAAAATGTCCACGGTCTAAGTAGTTAGCCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR CCA 90 bp TCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGGATCTAGAGAATACTGTTACACAAATGTaGCACAATCTCACCTCATTT +
Preference number: 2 (lower is better)
Translates to: SPFLHLLDHGQDSEDLENTVTQM*HNLTSF
Trigger: AAATGAGGTGAGATTGTGCCACATTTGTGTAACAGT...ATTCTCTAGATCCTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR CCA 90 bp TCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGGATCTAGAGAATTCAGGTGGTCATAAATaGAGTTATTCTTCCCAACTT +
Preference number: 2 (lower is better)
Translates to: SPFLHLLDHGQDSEDLENSGGHK*SYSSQL
Trigger: AAGTTGGGAAGAATAACTCCATTTATGACCACCTGA...ATTCTCTAGATCCTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR CCA 90 bp TCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGGATCTAGAGAATCAGGAAATTTGGATCTaGCTAATCCTGCTATATAAG +
Preference number: 2 (lower is better)
Translates to: SPFLHLLDHGQDSEDLENQEIWI*LILLYK
Trigger: CTTATATAGCAGGATTAGCCAGATCCAAATTTCCTG...ATTCTCTAGATCCTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR CCA 90 bp GTTAGTTACATACATATACATGTGCCATGCTGGTGTGCTGTGCCCATTAACTCGTTTCACAACAGAGACTaGCAAATTCTCAGGTTCACT +
Preference number: 2 (lower is better)
Translates to: VSYIHIHVPCWCAVPINSFHNRD*QILRFT
Trigger: AGTGAACCTGAGAATTTGCCAGTCTCTGTTGTGAAA...CGAGTTAATGGGCACAGCACACCAGCATGGCACATGTATATGTATGTAACTAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR TCA 90 bp TGGGCTTGCATTGTTCAGGTGGTCATAAATGGAGTTATTCTTCCCAACTTTTCTCTTTTTGCAGCAATCTaGATCCCAGTACTTTCAGAC +
Preference number: 2 (lower is better)
Translates to: WACIVQVVINGVILPNFSLFAAI*IPVLSD
Trigger: GTCTGAAAGTACTGGGATTCAGATTGCTGCAAAAAG...AGAAAAGTTGGGAAGAATAACTCCATTTATGACCACCTGAACAATGCAAGCCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR CCA 90 bp TTCTTAATTCTCTCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGACTGTTACACAAATGTaGCACAATCTCACCTCATTT +
Preference number: 2 (lower is better)
Translates to: FLILSPFLHLLDHGQDSETVTQM*HNLTSF
Trigger: AAATGAGGTGAGATTGTGCCACATTTGTGTAACAGT...CTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGAGAGAATTAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR CCA 90 bp GTTAGTTACATACATATACATGTGCCATGCTGGTGTGCTGTGCCCATTAACTCGCAGGAAATTTGGATCTaGCTAATCCTGCTATATAAG +
Preference number: 2 (lower is better)
Translates to: VSYIHIHVPCWCAVPINSQEIWI*LILLYK
Trigger: CTTATATAGCAGGATTAGCCAGATCCAAATTTCCTG...CGAGTTAATGGGCACAGCACACCAGCATGGCACATGTATATGTATGTAACTAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR GCA 90 bp GTTAGTTACATACATATACATGTGCCATGCTGGTGTGCTGTGCCCATTAACTCGTTCTTTCTTTGCGCATaGTGGTTTCTTTTTGTCTTT +
Preference number: 2 (lower is better)
Translates to: VSYIHIHVPCWCAVPINSFFLCA*WFLFVF
Trigger: AAAGACAAAAAGAAACCAGCATGCGCAAAGAAAGAA...CGAGTTAATGGGCACAGCACACCAGCATGGCACATGTATATGTATGTAACTAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR TCA 90 bp TTTCTCAAAATCAAAGGAGCTGTCCACAGCCTCAACAGTGATTCTTCTCCTTTTAGTGATTCTTCTTTATaGACACTCTCACTAACAGCA +
Preference number: 2 (lower is better)
Translates to: FLKIKGAVHSLNSDSSPFSDSSL*TLSLTA
Trigger: TGCTGTTAGTGAGAGTGTTCATAAAGAAGAATCACT...AAAAGGAGAAGAATCACTGTTGAGGCTGTGGACAGCTCCTTTGATTTTGAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR GCA 90 bp TGGGCTTGCATTGTTCAGGTGGTCATAAATGGAGTTATTCTTCCCAACTTTTCTTTCTTTCTTTGCGCATaGTGGTTTCTTTTTGTCTTT +
Preference number: 2 (lower is better)
Translates to: WACIVQVVINGVILPNFSFFLCA*WFLFVF
Trigger: AAAGACAAAAAGAAACCAGCATGCGCAAAGAAAGAA...AGAAAAGTTGGGAAGAATAACTCCATTTATGACCACCTGAACAATGCAAGCCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR CCA 90 bp TTTCTCAAAATCAAAGGAGCTGTCCACAGCCTCAACAGTGATTCTTCTCCTTTTATAAGACACCTCATGTaGACAAGTACATGTTGTTTT +
Preference number: 2 (lower is better)
Translates to: FLKIKGAVHSLNSDSSPFIRHLM*TSTCCF
Trigger: AAAACAACATGTACTTGTCCACATGAGGTGTCTTAT...AAAAGGAGAAGAATCACTGTTGAGGCTGTGGACAGCTCCTTTGATTTTGAGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR TCA 72 bp GTGGAGCCCAAGACGGGAGAAGCCTGCATTTCTGAATaGCAGTGTGGCACTGTGCCCTCTTTCTGCAGACCA +
Preference number: 3 (lower is better)
Translates to: VEPKTGEACISE*QCGTVPSFCRP
Trigger: TGGTCTGCAGAAAGAGGGCACAGTGCCACACTGTCATTCAGAAATGCAGGCTTCTCCCGTCTTGGGCTCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR TCA 72 bp GAATGTGGAGCCCAAGACGGGAGAAGCCTGCATTTCTaGATGACAGTGTGGCACTGTGCCCTCTTTCTGCAG +
Preference number: 3 (lower is better)
Translates to: ECGAQDGRSLHF*MTVWHCALFLQ
Trigger: CTGCAGAAAGAGGGCACAGTGCCACACTGTCATTCAGAAATGCAGGCTTCTCCCGTCTTGGGCTCCACATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR GCA 72 bp GAGAAGCCTGCATTTCTGAATGACAGTGTGGCACTGTaGCCTCTTTCTGCAGACCAGCATTGGCCTGTGACA +
Preference number: 3 (lower is better)
Translates to: EKPAFLNDSVAL*PLSADQHWPVT
Trigger: TGTCACAGGCCAATGCTGGTCTGCAGAAAGAGGGCACAGTGCCACACTGTCATTCAGAAATGCAGGCTTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR CAA 90 bp GTGGCTAACTACTTAGACCGTGGACATTTTTGTTGCAGTGGTTGGCCTACTCTGGCTGGTCTTGAACTCTaGGGCTCAAGTGATCCCTCC +
Preference number: 3 (lower is better)
Translates to: VANYLDRGHFCCSGWPTLAGLEL*GSSDPS
Trigger: GGAGGGATCACTTGAGCCCAAGAGTTCAAGACCAGC...CAGAGTAGGCCAACCACTGCAACAAAAATGTCCACGGTCTAAGTAGTTAGCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR TCA 72 bp TCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTaGGGATCTAGAGAATGTGGAGCCCAAGACGGGAGA +
Preference number: 3 (lower is better)
Translates to: SLSPSAGSWTGF*GSRECGAQDGR
Trigger: TCTCCCGTCTTGGGCTCCACATTCTCTAGATCCTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR CAA 90 bp TCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGGATCTAGAGAATGCTGGTCTTGAACTCTaGGGCTCAAGTGATCCCTCC +
Preference number: 3 (lower is better)
Translates to: SPFLHLLDHGQDSEDLENAGLEL*GSSDPS
Trigger: GGAGGGATCACTTGAGCCCAAGAGTTCAAGACCAGC...ATTCTCTAGATCCTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR CAA 90 bp GTGGCTAACTACTTAGACCGTGGACATTTTTGTTGCAGTGGTTGGCCTACTCTGGCCAGCTGCTATGGCTaGAGCTTTATCATAGTGGGG +
Preference number: 3 (lower is better)
Translates to: VANYLDRGHFCCSGWPTLASCYG*SFIIVG
Trigger: CCCCACTATGATAAAGCTCAAGCCATAGCAGCTGGC...CAGAGTAGGCCAACCACTGCAACAAAAATGTCCACGGTCTAAGTAGTTAGCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR CAA 90 bp TTCTTAATTCTCTCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGTTGCCCAGGCTGGTCTaGAACTCTTGGGCTCAAGTG +
Preference number: 3 (lower is better)
Translates to: FLILSPFLHLLDHGQDSELPRLV*NSWAQV
Trigger: CACTTGAGCCCAAGAGTTCAAGACCAGCCTGGGCAA...CTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGAGAGAATTAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR CAA 90 bp TTCTTAATTCTCTCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGTGGGGTTTCACCATGTaGGTCAAGCTGGCCTCGATC +
Preference number: 3 (lower is better)
Translates to: FLILSPFLHLLDHGQDSEWGFTM*VKLASI
Trigger: GATCGAGGCCAGCTTGACCAACATGGTGAAACCCCA...CTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGAGAGAATTAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR CAA 90 bp GTTAGTTACATACATATACATGTGCCATGCTGGTGTGCTGTGCCCATTAACTCGTGGGGTTTCACCATGTaGGTCAAGCTGGCCTCGATC +
Preference number: 3 (lower is better)
Translates to: VSYIHIHVPCWCAVPINSWGFTM*VKLASI
Trigger: GATCGAGGCCAGCTTGACCAACATGGTGAAACCCCA...CGAGTTAATGGGCACAGCACACCAGCATGGCACATGTATATGTATGTAACTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR CAA 90 bp GTTAGTTACATACATATACATGTGCCATGCTGGTGTGCTGTGCCCATTAACTCGGCCAGCTGCTATGGCTaGAGCTTTATCATAGTGGGG +
Preference number: 3 (lower is better)
Translates to: VSYIHIHVPCWCAVPINSASCYG*SFIIVG
Trigger: CCCCACTATGATAAAGCTCAAGCCATAGCAGCTGGC...CGAGTTAATGGGCACAGCACACCAGCATGGCACATGTATATGTATGTAACTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR CAA 90 bp TCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGGATCTAGAGAATAGACCGTGGACATTTTaGTTGCAGTGGTTGGCCTAC +
Preference number: 3 (lower is better)
Translates to: SPFLHLLDHGQDSEDLENRPWTF*LQWLAY
Trigger: GTAGGCCAACCACTGCAACAAAAATGTCCACGGTCT...ATTCTCTAGATCCTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR CAA 90 bp TTTCTCAAAATCAAAGGAGCTGTCCACAGCCTCAACAGTGATTCTTCTCCTTTTTTGCCCAGGCTGGTCTaGAACTCTTGGGCTCAAGTG +
Preference number: 3 (lower is better)
Translates to: FLKIKGAVHSLNSDSSPFLPRLV*NSWAQV
Trigger: CACTTGAGCCCAAGAGTTCAAGACCAGCCTGGGCAA...AAAAGGAGAAGAATCACTGTTGAGGCTGTGGACAGCTCCTTTGATTTTGAGAAA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR CAA 90 bp TTCTTAATTCTCTCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGCCGTGGACATTTTTGTaGCAGTGGTTGGCCTACTCT +
Preference number: 3 (lower is better)
Translates to: FLILSPFLHLLDHGQDSEPWTFL*QWLAYS
Trigger: AGAGTAGGCCAACCACTGCAACAAAAATGTCCACGG...CTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGAGAGAATTAAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR CAA 90 bp GTTAGTTACATACATATACATGTGCCATGCTGGTGTGCTGTGCCCATTAACTCGCCGTGGACATTTTTGTaGCAGTGGTTGGCCTACTCT +
Preference number: 3 (lower is better)
Translates to: VSYIHIHVPCWCAVPINSPWTFL*QWLAYS
Trigger: AGAGTAGGCCAACCACTGCAACAAAAATGTCCACGG...CGAGTTAATGGGCACAGCACACCAGCATGGCACATGTATATGTATGTAACTAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR CAA 90 bp TTCTTAATTCTCTCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGAGACCGTGGACATTTTaGTTGCAGTGGTTGGCCTAC +
Preference number: 3 (lower is better)
Translates to: FLILSPFLHLLDHGQDSERPWTF*LQWLAY
Trigger: GTAGGCCAACCACTGCAACAAAAATGTCCACGGTCT...CTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGAGAGAATTAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR CAA 90 bp GTGGCTAACTACTTAGACCGTGGACATTTTTGTTGCAGTGGTTGGCCTACTCTGAGGTATCTCTTTGTTTaGGGCATGAACAAGCTCCTT +
Preference number: 3 (lower is better)
Translates to: VANYLDRGHFCCSGWPTLRYLFV*GMNKLL
Trigger: AAGGAGCTTGTTCATGCCCAAAACAAAGAGATACCT...CAGAGTAGGCCAACCACTGCAACAAAAATGTCCACGGTCTAAGTAGTTAGCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR CAA 90 bp GTTAGTTACATACATATACATGTGCCATGCTGGTGTGCTGTGCCCATTAACTCGTGTTCCTGCATTAATTaGCTTAGGATCACGGCCTCC +
Preference number: 3 (lower is better)
Translates to: VSYIHIHVPCWCAVPINSCSCIN*LRITAS
Trigger: GGAGGCCGTGATCCTAAGCAAATTAATGCAGGAACA...CGAGTTAATGGGCACAGCACACCAGCATGGCACATGTATATGTATGTAACTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR GCA 72 bp ACCAGTATTCACCCCAAGAGTGTATTACGCCATGGCTaGACTGAGTTCACTGTTACACAAATGTGGCACAAT +
Preference number: 3 (lower is better)
Translates to: TSIHPKSVLRHG*TEFTVTQMWHN
Trigger: ATTGTGCCACATTTGTGTAACAGTGAACTCAGTGCAGCCATGGCGTAATACACTCTTGGGGTGAATACTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR CCA 72 bp CGCCATGGCTGCACTGAGTTCACTGTTACACAAATGTaGCACAATCTCACCTCATTTTCTTTCTTTGCGCAT +
Preference number: 3 (lower is better)
Translates to: RHGCTEFTVTQM*HNLTSFSFFAH
Trigger: ATGCGCAAAGAAAGAAAATGAGGTGAGATTGTGCCACATTTGTGTAACAGTGAACTCAGTGCAGCCATGGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR CAA 90 bp TGGGCTTGCATTGTTCAGGTGGTCATAAATGGAGTTATTCTTCCCAACTTTTCTAAGTGTCTTGATCTGTaGCTCAGGCTGGAGTGCAGT +
Preference number: 3 (lower is better)
Translates to: WACIVQVVINGVILPNFSKCLDL*LRLECS
Trigger: ACTGCACTCCAGCCTGAGCAACAGATCAAGACACTT...AGAAAAGTTGGGAAGAATAACTCCATTTATGACCACCTGAACAATGCAAGCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR CAA 90 bp GTTAGTTACATACATATACATGTGCCATGCTGGTGTGCTGTGCCCATTAACTCGACAGAAATCATGGGCTaGCATTGTTCAGGTGGTCAT +
Preference number: 3 (lower is better)
Translates to: VSYIHIHVPCWCAVPINSTEIMG*HCSGGH
Trigger: ATGACCACCTGAACAATGCAAGCCCATGATTTCTGT...CGAGTTAATGGGCACAGCACACCAGCATGGCACATGTATATGTATGTAACTAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR CAA 90 bp GTTAGTTACATACATATACATGTGCCATGCTGGTGTGCTGTGCCCATTAACTCGATCCCAGGGTTTACCTaGATCATTTCCCTCTTCCTT +
Preference number: 3 (lower is better)
Translates to: VSYIHIHVPCWCAVPINSIPGFT*IISLFL
Trigger: AAGGAAGAGGGAAATGATCAAGGTAAACCCTGGGAT...CGAGTTAATGGGCACAGCACACCAGCATGGCACATGTATATGTATGTAACTAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR CCA 72 bp AGTGAATTGGGGATCCTCTCTCCTCAACAGAAATCATaGGCTTGCATTGTTCAGGTGGTCATAAATGGAGTT +
Preference number: 3 (lower is better)
Translates to: SELGILSPQQKS*ACIVQVVINGV
Trigger: AACTCCATTTATGACCACCTGAACAATGCAAGCCCATGATTTCTGTTGAGGAGAGAGGATCCCCAATTCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR CCA 72 bp AACTACTTAGACCGTGGACATTTTTGTTGCAGTGGTTaGCCTACTCTGATTGATAAATGTGTGCCAGCTGCT +
Preference number: 3 (lower is better)
Translates to: NYLDRGHFCCSG*PTLIDKCVPAA
Trigger: AGCAGCTGGCACACATTTATCAATCAGAGTAGGCCAACCACTGCAACAAAAATGTCCACGGTCTAAGTAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR CAA 90 bp GTGGCTAACTACTTAGACCGTGGACATTTTTGTTGCAGTGGTTGGCCTACTCTGCTACATTTAATCTTTTaGCAGCAATCTGAATCCCAG +
Preference number: 3 (lower is better)
Translates to: VANYLDRGHFCCSGWPTLLHLIF*QQSESQ
Trigger: CTGGGATTCAGATTGCTGCAAAAAGATTAAATGTAG...CAGAGTAGGCCAACCACTGCAACAAAAATGTCCACGGTCTAAGTAGTTAGCCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR CCA 72 bp GTGCAGGTTAGTTACATACATATACATGTGCCATGCTaGTGTGCTGTGCCCATTAACTCGTCATTTAGCATT +
Preference number: 3 (lower is better)
Translates to: VQVSYIHIHVPC*CAVPINSSFSI
Trigger: AATGCTAAATGACGAGTTAATGGGCACAGCACACCAGCATGGCACATGTATATGTATGTAACTAACCTGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR CAA 90 bp TTTCTCAAAATCAAAGGAGCTGTCCACAGCCTCAACAGTGATTCTTCTCCTTTTACAGAAATCATGGGCTaGCATTGTTCAGGTGGTCAT +
Preference number: 3 (lower is better)
Translates to: FLKIKGAVHSLNSDSSPFTEIMG*HCSGGH
Trigger: ATGACCACCTGAACAATGCAAGCCCATGATTTCTGT...AAAAGGAGAAGAATCACTGTTGAGGCTGTGGACAGCTCCTTTGATTTTGAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR-3UTR CAA 90 bp TTCTTAATTCTCTCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGCTACATTTAATCTTTTaGCAGCAATCTGAATCCCAG +
Preference number: 3 (lower is better)
Translates to: FLILSPFLHLLDHGQDSELHLIF*QQSESQ
Trigger: CTGGGATTCAGATTGCTGCAAAAAGATTAAATGTAG...CTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGAGAGAATTAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR TCA 72 bp TATAATGTATCACATTTTCTTCATCTAGTCCACCATTaGTGGGCACCTAGGCTGATTCCTTGTCTTTGCTAC +
Preference number: 3 (lower is better)
Translates to: YNVSHFLHLVHH*WAPRLIPCLCY
Trigger: GTAGCAAAGACAAGGAATCAGCCTAGGTGCCCATCAATGGTGGACTAGATGAAGAAAATGTGATACATTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR TCA 72 bp AGACAAAGTCTTAATCTTTGTAATGTAACCCAACTGTaGTTTCTTAGCAGTGAATCTTACATGTGGAAGAGA +
Preference number: 3 (lower is better)
Translates to: RQSLNLCNVTQL*FLSSESYMWKR
Trigger: TCTCTTCCACATGTAAGATTCACTGCTAAGAAATCACAGTTGGGTTACATTACAAAGATTAAGACTTTGTCT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR TCA 90 bp TCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGGATCTAGAGAATCCCAGGAAGCCACGATaGGGCCTGTGCATCGCCCCC +
Preference number: 4 (lower is better)
Translates to: SPFLHLLDHGQDSEDLENPRKPR*GLCIAP
Trigger: GGGGGCGATGCACAGGCCTCATCGTGGCTTCCTGGG...ATTCTCTAGATCCTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR TCA 90 bp GTGGCTAACTACTTAGACCGTGGACATTTTTGTTGCAGTGGTTGGCCTACTCTGGATCTCCTGACCTTGTaGTCCACCCGCCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: VANYLDRGHFCCSGWPTLDLLTL*STRLGL
Trigger: GAGGCCAAGGCGGGTGGATCACAAGGTCAGGAGATC...CAGAGTAGGCCAACCACTGCAACAAAAATGTCCACGGTCTAAGTAGTTAGCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR TCA 90 bp TCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGGATCTAGAGAATGGCTCGCTGCACCCTTaGCTTCCCCAGGCTCAAGTG +
Preference number: 4 (lower is better)
Translates to: SPFLHLLDHGQDSEDLENGSLHP*LPQAQV
Trigger: CACTTGAGCCTGGGGAAGTCAAGGGTGCAGCGAGCC...ATTCTCTAGATCCTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR CCA 90 bp GTGGCTAACTACTTAGACCGTGGACATTTTTGTTGCAGTGGTTGGCCTACTCTGAGCCTCCCCAGTAGCTaGGACTACAGGCACCCACCA +
Preference number: 4 (lower is better)
Translates to: VANYLDRGHFCCSGWPTLSLPSS*DYRHPP
Trigger: TGGTGGGTGCCTGTAGTCCCAGCTACTGGGGAGGCT...CAGAGTAGGCCAACCACTGCAACAAAAATGTCCACGGTCTAAGTAGTTAGCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR TCA 90 bp TTTCTCAAAATCAAAGGAGCTGTCCACAGCCTCAACAGTGATTCTTCTCCTTTTCCCAGGAAGCCACGATaGGGCCTGTGCATCGCCCCC +
Preference number: 4 (lower is better)
Translates to: FLKIKGAVHSLNSDSSPFPRKPR*GLCIAP
Trigger: GGGGGCGATGCACAGGCCTCATCGTGGCTTCCTGGG...AAAAGGAGAAGAATCACTGTTGAGGCTGTGGACAGCTCCTTTGATTTTGAGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR TCA 90 bp GTGGCTAACTACTTAGACCGTGGACATTTTTGTTGCAGTGGTTGGCCTACTCTGTGGTCAGGCTGGTCTTaGACTCCCGACCTCAGGTCA +
Preference number: 4 (lower is better)
Translates to: VANYLDRGHFCCSGWPTLWSGWS*TPDLRS
Trigger: TGACCTGAGGTCGGGAGTTCAAGACCAGCCTGACCA...CAGAGTAGGCCAACCACTGCAACAAAAATGTCCACGGTCTAAGTAGTTAGCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR TCA 90 bp GTGGCTAACTACTTAGACCGTGGACATTTTTGTTGCAGTGGTTGGCCTACTCTGTTCCCCAGGCTCAAGTaGTCCTCCCAGCTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: VANYLDRGHFCCSGWPTLFPRLK*SSQLSL
Trigger: GAGACTGAGCTGGGAGGATCACTTGAGCCTGGGGAA...CAGAGTAGGCCAACCACTGCAACAAAAATGTCCACGGTCTAAGTAGTTAGCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR CCA 90 bp TCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGGATCTAGAGAATGCAATCCACCCTCCCTaGCCTCCCAAGGTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: SPFLHLLDHGQDSEDLENAIHPP*PPKVLR
Trigger: TCTCAGCACCTTGGGAGGCCAGGGAGGGTGGATTGC...ATTCTCTAGATCCTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR TCA 90 bp TCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGGATCTAGAGAATCCCAGCTCAGTCTCCTaGGTAGCTAGGACTACAGGC +
Preference number: 4 (lower is better)
Translates to: SPFLHLLDHGQDSEDLENPSSVS*VARTTG
Trigger: GCCTGTAGTCCTAGCTACTCAGGAGACTGAGCTGGG...ATTCTCTAGATCCTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR GCA 90 bp GTTAGTTACATACATATACATGTGCCATGCTGGTGTGCTGTGCCCATTAACTCGTGCTTCCCGGGTTCATaGCATTCTCCCGCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: VSYIHIHVPCWCAVPINSCFPGS*HSPASA
Trigger: GGCTGAGGCGGGAGAATGGCATGAACCCGGGAAGCA...CGAGTTAATGGGCACAGCACACCAGCATGGCACATGTATATGTATGTAACTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR TCA 90 bp GTTAGTTACATACATATACATGTGCCATGCTGGTGTGCTGTGCCCATTAACTCGACTCTTGGGCTCAAGTaGTCCCTCCACCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: VSYIHIHVPCWCAVPINSTLGLK*SLHLSL
Trigger: GAGGCTGAGGTGGAGGGATCACTTGAGCCCAAGAGT...CGAGTTAATGGGCACAGCACACCAGCATGGCACATGTATATGTATGTAACTAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR GCA 90 bp TTCTTAATTCTCTCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGCTCAGGTCATCTGCCTaGCTTGGCCTCCCAAAGTGC +
Preference number: 4 (lower is better)
Translates to: FLILSPFLHLLDHGQDSELRSSA*LGLPKC
Trigger: GCACTTTGGGAGGCCAAGGCAGGCAGATGACCTGAG...CTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGAGAGAATTAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR GCA 90 bp TCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGGATCTAGAGAATAGGGTCTCACTCTTTTaGCCAGGTGGGAGTACGGTG +
Preference number: 4 (lower is better)
Translates to: SPFLHLLDHGQDSEDLENRVSLF*PGGSTV
Trigger: CACCGTACTCCCACCTGGGCAAAAGAGTGAGACCCT...ATTCTCTAGATCCTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR CCA 90 bp TCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGGATCTAGAGAATAGCCTTCCGAGTAGCTaGGATTACAGGCATGCGCCA +
Preference number: 4 (lower is better)
Translates to: SPFLHLLDHGQDSEDLENSLPSS*DYRHAP
Trigger: TGGCGCATGCCTGTAATCCCAGCTACTCGGAAGGCT...ATTCTCTAGATCCTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR TCA 90 bp GTGGCTAACTACTTAGACCGTGGACATTTTTGTTGCAGTGGTTGGCCTACTCTGCAGTTGCTTCCCATTTaGGAGCTTGGCATCTGCCTT +
Preference number: 4 (lower is better)
Translates to: VANYLDRGHFCCSGWPTLQLLPI*ELGICL
Trigger: AAGGCAGATGCCAAGCTCTCAAATGGGAAGCAACTG...CAGAGTAGGCCAACCACTGCAACAAAAATGTCCACGGTCTAAGTAGTTAGCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR TCA 90 bp GTGGCTAACTACTTAGACCGTGGACATTTTTGTTGCAGTGGTTGGCCTACTCTGGATGGGCACCTAGGCTaGTTCCTTGTCTTTGCTACT +
Preference number: 4 (lower is better)
Translates to: VANYLDRGHFCCSGWPTLDGHLG*FLVFAT
Trigger: AGTAGCAAAGACAAGGAATCAGCCTAGGTGCCCATC...CAGAGTAGGCCAACCACTGCAACAAAAATGTCCACGGTCTAAGTAGTTAGCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR TCA 90 bp TCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGGATCTAGAGAATACAGTCCCTAGAGTGTaGTGTTCCCCTTCCTGTGTC +
Preference number: 4 (lower is better)
Translates to: SPFLHLLDHGQDSEDLENTVPRV*CSPSCV
Trigger: GACACAGGAAGGGGAACATCACACTCTAGGGACTGT...ATTCTCTAGATCCTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR GCA 90 bp TGGGCTTGCATTGTTCAGGTGGTCATAAATGGAGTTATTCTTCCCAACTTTTCTTGCTTCCCGGGTTCATaGCATTCTCCCGCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: WACIVQVVINGVILPNFSCFPGS*HSPASA
Trigger: GGCTGAGGCGGGAGAATGGCATGAACCCGGGAAGCA...AGAAAAGTTGGGAAGAATAACTCCATTTATGACCACCTGAACAATGCAAGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR GCA 90 bp TTCTTAATTCTCTCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGGACAGTGTGGCACTGTaGCCTCTTTCTGCAGACCAG +
Preference number: 4 (lower is better)
Translates to: FLILSPFLHLLDHGQDSEDSVAL*PLSADQ
Trigger: CTGGTCTGCAGAAAGAGGGCACAGTGCCACACTGTC...CTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGAGAGAATTAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR GCA 90 bp GTGGCTAACTACTTAGACCGTGGACATTTTTGTTGCAGTGGTTGGCCTACTCTGGGGGTTTTGCCATGTTaGCCAGGCTGTTCTGAAACT +
Preference number: 4 (lower is better)
Translates to: VANYLDRGHFCCSGWPTLGVLPC*PGCSET
Trigger: AGTTTCAGAACAGCCTGGGCAACATGGCAAAACCCC...CAGAGTAGGCCAACCACTGCAACAAAAATGTCCACGGTCTAAGTAGTTAGCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR GCA 90 bp TTCTTAATTCTCTCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGAGGGTCTCACTCTTTTaGCCAGGTGGGAGTACGGTG +
Preference number: 4 (lower is better)
Translates to: FLILSPFLHLLDHGQDSERVSLF*PGGSTV
Trigger: CACCGTACTCCCACCTGGGCAAAAGAGTGAGACCCT...CTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGAGAGAATTAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR CCA 90 bp TGGGCTTGCATTGTTCAGGTGGTCATAAATGGAGTTATTCTTCCCAACTTTTCTGCAATCCACCCTCCCTaGCCTCCCAAGGTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: WACIVQVVINGVILPNFSAIHPP*PPKVLR
Trigger: TCTCAGCACCTTGGGAGGCCAGGGAGGGTGGATTGC...AGAAAAGTTGGGAAGAATAACTCCATTTATGACCACCTGAACAATGCAAGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR TCA 90 bp TGGGCTTGCATTGTTCAGGTGGTCATAAATGGAGTTATTCTTCCCAACTTTTCTTGGTCAGGCTGGTCTTaGACTCCCGACCTCAGGTCA +
Preference number: 4 (lower is better)
Translates to: WACIVQVVINGVILPNFSWSGWS*TPDLRS
Trigger: TGACCTGAGGTCGGGAGTTCAAGACCAGCCTGACCA...AGAAAAGTTGGGAAGAATAACTCCATTTATGACCACCTGAACAATGCAAGCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR TCA 90 bp TCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGGATCTAGAGAATTGGAGTGTGATGGTGTaGTCTCAGCTTACTGCAACC +
Preference number: 4 (lower is better)
Translates to: SPFLHLLDHGQDSEDLENWSVMV*SQLTAT
Trigger: GGTTGCAGTAAGCTGAGATCACACCATCACACTCCA...ATTCTCTAGATCCTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR TCA 90 bp TTTCTCAAAATCAAAGGAGCTGTCCACAGCCTCAACAGTGATTCTTCTCCTTTTACTCTTGGGCTCAAGTaGTCCCTCCACCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: FLKIKGAVHSLNSDSSPFTLGLK*SLHLSL
Trigger: GAGGCTGAGGTGGAGGGATCACTTGAGCCCAAGAGT...AAAAGGAGAAGAATCACTGTTGAGGCTGTGGACAGCTCCTTTGATTTTGAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR TCA 90 bp GTGGCTAACTACTTAGACCGTGGACATTTTTGTTGCAGTGGTTGGCCTACTCTGGTGGTTGGCCTACTCTaGTTGATAAATGTGTGCCAG +
Preference number: 4 (lower is better)
Translates to: VANYLDRGHFCCSGWPTLVVGLL*LINVCQ
Trigger: CTGGCACACATTTATCAATCAGAGTAGGCCAACCAC...CAGAGTAGGCCAACCACTGCAACAAAAATGTCCACGGTCTAAGTAGTTAGCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR TCA 90 bp GTGGCTAACTACTTAGACCGTGGACATTTTTGTTGCAGTGGTTGGCCTACTCTGACCAGCATTGGCCTGTaGCATGAGCAAGAAGTAAAC +
Preference number: 4 (lower is better)
Translates to: VANYLDRGHFCCSGWPTLTSIGL*HEQEVN
Trigger: GTTTACTTCTTGCTCATGTCACAGGCCAATGCTGGT...CAGAGTAGGCCAACCACTGCAACAAAAATGTCCACGGTCTAAGTAGTTAGCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR TCA 90 bp TCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGGATCTAGAGAATGAGCATAAGACAGCATaGGCATGTTCAGGTGAGGTG +
Preference number: 4 (lower is better)
Translates to: SPFLHLLDHGQDSEDLENEHKTA*ACSGEV
Trigger: CACCTCACCTGAACATGCTCATGCTGTCTTATGCTC...ATTCTCTAGATCCTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR TCA 90 bp TTTCTCAAAATCAAAGGAGCTGTCCACAGCCTCAACAGTGATTCTTCTCCTTTTTTCCCCAGGCTCAAGTaGTCCTCCCAGCTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: FLKIKGAVHSLNSDSSPFFPRLK*SSQLSL
Trigger: GAGACTGAGCTGGGAGGATCACTTGAGCCTGGGGAA...AAAAGGAGAAGAATCACTGTTGAGGCTGTGGACAGCTCCTTTGATTTTGAGAAA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR TCA 90 bp TTCTTAATTCTCTCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGACAGTCCCTAGAGTGTaGTGTTCCCCTTCCTGTGTC +
Preference number: 4 (lower is better)
Translates to: FLILSPFLHLLDHGQDSETVPRV*CSPSCV
Trigger: GACACAGGAAGGGGAACATCACACTCTAGGGACTGT...CTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGAGAGAATTAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR GCA 90 bp GTGGCTAACTACTTAGACCGTGGACATTTTTGTTGCAGTGGTTGGCCTACTCTGCGTGGACATTTTTGTTaGAGTGGTTGGCCTACTCTG +
Preference number: 4 (lower is better)
Translates to: VANYLDRGHFCCSGWPTLRGHFC*SGWPTL
Trigger: CAGAGTAGGCCAACCACTGCAACAAAAATGTCCACG...CAGAGTAGGCCAACCACTGCAACAAAAATGTCCACGGTCTAAGTAGTTAGCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR GCA 90 bp GTGGCTAACTACTTAGACCGTGGACATTTTTGTTGCAGTGGTTGGCCTACTCTGCATATACATGTGCCATaGTGGTGTGCTGTGCCCATT +
Preference number: 4 (lower is better)
Translates to: VANYLDRGHFCCSGWPTLHIHVP*WCAVPI
Trigger: AATGGGCACAGCACACCAGCATGGCACATGTATATG...CAGAGTAGGCCAACCACTGCAACAAAAATGTCCACGGTCTAAGTAGTTAGCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR CCA 90 bp TCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGGATCTAGAGAATCTGGTCTTGAACTCTTaGGCTCAAGTGATCCCTCCA +
Preference number: 4 (lower is better)
Translates to: SPFLHLLDHGQDSEDLENLVLNS*AQVIPP
Trigger: TGGAGGGATCACTTGAGCCCAAGAGTTCAAGACCAG...ATTCTCTAGATCCTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR CCA 90 bp GTGGCTAACTACTTAGACCGTGGACATTTTTGTTGCAGTGGTTGGCCTACTCTGTTTGGGAGGCTGAAGTaGAGGGATCATTTGAGTCCA +
Preference number: 4 (lower is better)
Translates to: VANYLDRGHFCCSGWPTLFGRLK*RDHLSP
Trigger: TGGACTCAAATGATCCCTCCACTTCAGCCTCCCAAA...CAGAGTAGGCCAACCACTGCAACAAAAATGTCCACGGTCTAAGTAGTTAGCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR TCA 90 bp GTTAGTTACATACATATACATGTGCCATGCTGGTGTGCTGTGCCCATTAACTCGTGGAGTGTGATGGTGTaGTCTCAGCTTACTGCAACC +
Preference number: 4 (lower is better)
Translates to: VSYIHIHVPCWCAVPINSWSVMV*SQLTAT
Trigger: GGTTGCAGTAAGCTGAGATCACACCATCACACTCCA...CGAGTTAATGGGCACAGCACACCAGCATGGCACATGTATATGTATGTAACTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR TCA 90 bp TCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGGATCTAGAGAATTGCGCCCGGCAACAGTaGTTCTTCTTTATGAACACT +
Preference number: 4 (lower is better)
Translates to: SPFLHLLDHGQDSEDLENCARQQ*FFFMNT
Trigger: AGTGTTCATAAAGAAGAATCACTGTTGCCGGGCGCA...ATTCTCTAGATCCTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR TCA 90 bp TTTCTCAAAATCAAAGGAGCTGTCCACAGCCTCAACAGTGATTCTTCTCCTTTTGCCTGCATTTCTGAATaGCAGTGTGGCACTGTGCCC +
Preference number: 4 (lower is better)
Translates to: FLKIKGAVHSLNSDSSPFACISE*QCGTVP
Trigger: GGGCACAGTGCCACACTGTCATTCAGAAATGCAGGC...AAAAGGAGAAGAATCACTGTTGAGGCTGTGGACAGCTCCTTTGATTTTGAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR TCA 90 bp GTTAGTTACATACATATACATGTGCCATGCTGGTGTGCTGTGCCCATTAACTCGGAGCATAAGACAGCATaGGCATGTTCAGGTGAGGTG +
Preference number: 4 (lower is better)
Translates to: VSYIHIHVPCWCAVPINSEHKTA*ACSGEV
Trigger: CACCTCACCTGAACATGCTCATGCTGTCTTATGCTC...CGAGTTAATGGGCACAGCACACCAGCATGGCACATGTATATGTATGTAACTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR GCA 90 bp TCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGGATCTAGAGAATGGTTCATCTTGTGTCTaGAAGTCAGTATGCCACCAC +
Preference number: 4 (lower is better)
Translates to: SPFLHLLDHGQDSEDLENGSSCV*KSVCHH
Trigger: GTGGTGGCATACTGACTTGCAGACACAAGATGAACC...ATTCTCTAGATCCTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR GCA 90 bp TTTCTCAAAATCAAAGGAGCTGTCCACAGCCTCAACAGTGATTCTTCTCCTTTTGTGATCTCAGCTTACTaGAACCTCTGCCTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: FLKIKGAVHSLNSDSSPFVISAY*NLCLPG
Trigger: ACCCGGGAGGCAGAGGTTGCAGTAAGCTGAGATCAC...AAAAGGAGAAGAATCACTGTTGAGGCTGTGGACAGCTCCTTTGATTTTGAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR GCA 90 bp TTCTTAATTCTCTCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGGGGGTTTTGCCATGTTaGCCAGGCTGTTCTGAAACT +
Preference number: 4 (lower is better)
Translates to: FLILSPFLHLLDHGQDSEGVLPC*PGCSET
Trigger: AGTTTCAGAACAGCCTGGGCAACATGGCAAAACCCC...CTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGAGAGAATTAAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR CCA 90 bp TCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGGATCTAGAGAATTTTGGGAGGCTGAAGTaGAGGGATCATTTGAGTCCA +
Preference number: 4 (lower is better)
Translates to: SPFLHLLDHGQDSEDLENFGRLK*RDHLSP
Trigger: TGGACTCAAATGATCCCTCCACTTCAGCCTCCCAAA...ATTCTCTAGATCCTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR CCA 90 bp GTGGCTAACTACTTAGACCGTGGACATTTTTGTTGCAGTGGTTGGCCTACTCTGGTATATACCCAGCAATaGGATTGCTGCGTCAAATGG +
Preference number: 4 (lower is better)
Translates to: VANYLDRGHFCCSGWPTLVYTQQ*DCCVKW
Trigger: CCATTTGACGCAGCAATCCCATTGCTGGGTATATAC...CAGAGTAGGCCAACCACTGCAACAAAAATGTCCACGGTCTAAGTAGTTAGCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR CAA 72 bp CCCTCAAGTAGGCCTCAGTGTCTTTTGTTCCCATCTTaGTGTCCATGTGTAAATCGATGGTTAGCTCTCACC +
Preference number: 4 (lower is better)
Translates to: PSSRPQCLLFPS*CPCVNRWLALT
Trigger: GGTGAGAGCTAACCATCGATTTACACATGGACACAAAGATGGGAACAAAAGACACTGAGGCCTACTTGAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR TCA 90 bp GTGGCTAACTACTTAGACCGTGGACATTTTTGTTGCAGTGGTTGGCCTACTCTGTATGCCACCACTGGATaGAAGATTACCCAGGTTTTT +
Preference number: 4 (lower is better)
Translates to: VANYLDRGHFCCSGWPTLYATTG*KITQVF
Trigger: AAAAACCTGGGTAATCTTTCATCCAGTGGTGGCATA...CAGAGTAGGCCAACCACTGCAACAAAAATGTCCACGGTCTAAGTAGTTAGCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR TCA 90 bp TCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGGATCTAGAGAATATTATGTCCTTGAAGTaGATTGGGGATCCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: SPFLHLLDHGQDSEDLENIMSLK*IGDPLS
Trigger: GGAGAGAGGATCCCCAATTCACTTCAAGGACATAAT...ATTCTCTAGATCCTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR TCA 90 bp GTGGCTAACTACTTAGACCGTGGACATTTTTGTTGCAGTGGTTGGCCTACTCTGAGGAAATTATGTCCTTaGAGTGAATTGGGGATCCTC +
Preference number: 4 (lower is better)
Translates to: VANYLDRGHFCCSGWPTLRKLCP*SELGIL
Trigger: GAGGATCCCCAATTCACTTCAAGGACATAATTTCCT...CAGAGTAGGCCAACCACTGCAACAAAAATGTCCACGGTCTAAGTAGTTAGCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR TCA 90 bp GTTAGTTACATACATATACATGTGCCATGCTGGTGTGCTGTGCCCATTAACTCGTGCGCCCGGCAACAGTaGTTCTTCTTTATGAACACT +
Preference number: 4 (lower is better)
Translates to: VSYIHIHVPCWCAVPINSCARQQ*FFFMNT
Trigger: AGTGTTCATAAAGAAGAATCACTGTTGCCGGGCGCA...CGAGTTAATGGGCACAGCACACCAGCATGGCACATGTATATGTATGTAACTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR TCA 90 bp GTGGCTAACTACTTAGACCGTGGACATTTTTGTTGCAGTGGTTGGCCTACTCTGTACCTTCTAATAGATTaGGTGGCACAGGTAAAGGAG +
Preference number: 4 (lower is better)
Translates to: VANYLDRGHFCCSGWPTLYLLID*VAQVKE
Trigger: CTCCTTTACCTGTGCCACTCAATCTATTAGAAGGTA...CAGAGTAGGCCAACCACTGCAACAAAAATGTCCACGGTCTAAGTAGTTAGCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR TCA 90 bp GTTAGTTACATACATATACATGTGCCATGCTGGTGTGCTGTGCCCATTAACTCGAGCTACTCAAGAGGCTaGGGCAGGAGAATCACTTAT +
Preference number: 4 (lower is better)
Translates to: VSYIHIHVPCWCAVPINSSYSRG*GRRITY
Trigger: ATAAGTGATTCTCCTGCCTCAGCCTCTTGAGTAGCT...CGAGTTAATGGGCACAGCACACCAGCATGGCACATGTATATGTATGTAACTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR TCA 90 bp TTCTTAATTCTCTCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGAGCTACTCAAGAGGCTaGGGCAGGAGAATCACTTAT +
Preference number: 4 (lower is better)
Translates to: FLILSPFLHLLDHGQDSESYSRG*GRRITY
Trigger: ATAAGTGATTCTCCTGCCTCAGCCTCTTGAGTAGCT...CTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGAGAGAATTAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR TCA 90 bp TCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGGATCTAGAGAATGAGAGTTGCTTTCTATaGGGATTGTCTTCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: SPFLHLLDHGQDSEDLENESCFL*GLSSWP
Trigger: AGGCCAAGAAGACAATCCTCATAGAAAGCAACTCTC...ATTCTCTAGATCCTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR GCA 90 bp TGGGCTTGCATTGTTCAGGTGGTCATAAATGGAGTTATTCTTCCCAACTTTTCTAGCCTCAACCTCTCCTaGCTCAGTCTCTCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: WACIVQVVINGVILPNFSSLNLS*LSLSSS
Trigger: GCTACTTGAGAGACTGAGGCAGGAGAGGTTGAGGCT...AGAAAAGTTGGGAAGAATAACTCCATTTATGACCACCTGAACAATGCAAGCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR GCA 90 bp TTTCTCAAAATCAAAGGAGCTGTCCACAGCCTCAACAGTGATTCTTCTCCTTTTAGCCTCAACCTCTCCTaGCTCAGTCTCTCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: FLKIKGAVHSLNSDSSPFSLNLS*LSLSSS
Trigger: GCTACTTGAGAGACTGAGGCAGGAGAGGTTGAGGCT...AAAAGGAGAAGAATCACTGTTGAGGCTGTGGACAGCTCCTTTGATTTTGAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR GCA 90 bp GTGGCTAACTACTTAGACCGTGGACATTTTTGTTGCAGTGGTTGGCCTACTCTGCAGAAATCATGGGCTTaGATTGTTCAGGTGGTCATA +
Preference number: 4 (lower is better)
Translates to: VANYLDRGHFCCSGWPTLQKSWA*IVQVVI
Trigger: TATGACCACCTGAACAATGCAAGCCCATGATTTCTG...CAGAGTAGGCCAACCACTGCAACAAAAATGTCCACGGTCTAAGTAGTTAGCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR GCA 90 bp TTCTTAATTCTCTCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGCATATACATGTGCCATaGTGGTGTGCTGTGCCCATT +
Preference number: 4 (lower is better)
Translates to: FLILSPFLHLLDHGQDSEHIHVP*WCAVPI
Trigger: AATGGGCACAGCACACCAGCATGGCACATGTATATG...CTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGAGAGAATTAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR GCA 90 bp TCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGGATCTAGAGAATACATACATATACATGTaGCATGCTGGTGTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: SPFLHLLDHGQDSEDLENTYIYM*HAGVLC
Trigger: GCACAGCACACCAGCATGGCACATGTATATGTATGT...ATTCTCTAGATCCTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR CCA 90 bp TTCTTAATTCTCTCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGAGTCTCTCAAGTAGCTaGGACTACAGGTGTGCATCA +
Preference number: 4 (lower is better)
Translates to: FLILSPFLHLLDHGQDSESLSSS*DYRCAS
Trigger: TGATGCACACCTGTAGTCCCAGCTACTTGAGAGACT...CTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGAGAGAATTAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR TCA 90 bp GTTAGTTACATACATATACATGTGCCATGCTGGTGTGCTGTGCCCATTAACTCGGATTACCCAGGTTTTTaGTTCAGTCATCCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: VSYIHIHVPCWCAVPINSDYPGF*FSHPRR
Trigger: TCTCCTGGGATGACTGAATCAAAAACCTGGGTAATC...CGAGTTAATGGGCACAGCACACCAGCATGGCACATGTATATGTATGTAACTAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR TCA 90 bp TTTCTCAAAATCAAAGGAGCTGTCCACAGCCTCAACAGTGATTCTTCTCCTTTTCTCAGTTCTCGGGACTaGGTAATTCCCAGGAAGGTA +
Preference number: 4 (lower is better)
Translates to: FLKIKGAVHSLNSDSSPFLSSRD*VIPRKV
Trigger: TACCTTCCTGGGAATTACTCAGTCCCGAGAACTGAG...AAAAGGAGAAGAATCACTGTTGAGGCTGTGGACAGCTCCTTTGATTTTGAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR TCA 90 bp TGGGCTTGCATTGTTCAGGTGGTCATAAATGGAGTTATTCTTCCCAACTTTTCTCTCAGTTCTCGGGACTaGGTAATTCCCAGGAAGGTA +
Preference number: 4 (lower is better)
Translates to: WACIVQVVINGVILPNFSLSSRD*VIPRKV
Trigger: TACCTTCCTGGGAATTACTCAGTCCCGAGAACTGAG...AGAAAAGTTGGGAAGAATAACTCCATTTATGACCACCTGAACAATGCAAGCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR TCA 90 bp GTTAGTTACATACATATACATGTGCCATGCTGGTGTGCTGTGCCCATTAACTCGTGGAAGAAGAACATTTaGGTGACACAGCCACTGAAG +
Preference number: 4 (lower is better)
Translates to: VSYIHIHVPCWCAVPINSWKKNI*VTQPLK
Trigger: CTTCAGTGGCTGTGTCACTCAAATGTTCTTCTTCCA...CGAGTTAATGGGCACAGCACACCAGCATGGCACATGTATATGTATGTAACTAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR TCA 90 bp TTTCTCAAAATCAAAGGAGCTGTCCACAGCCTCAACAGTGATTCTTCTCCTTTTCAGTTGCTTCCCATTTaGGAGCTTGGCATCTGCCTT +
Preference number: 4 (lower is better)
Translates to: FLKIKGAVHSLNSDSSPFQLLPI*ELGICL
Trigger: AAGGCAGATGCCAAGCTCTCAAATGGGAAGCAACTG...AAAAGGAGAAGAATCACTGTTGAGGCTGTGGACAGCTCCTTTGATTTTGAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR TCA 90 bp TTCTTAATTCTCTCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGTCCCAGGGTTTACCTTaGTCATTTCCCTCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: FLILSPFLHLLDHGQDSESQGLP*SFPSSF
Trigger: AAAGGAAGAGGGAAATGATCAAGGTAAACCCTGGGA...CTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGAGAGAATTAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR GCA 90 bp TTCTTAATTCTCTCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGGTCTGCAAGTCAGTATaGCACCACTGGATGAAAGAT +
Preference number: 4 (lower is better)
Translates to: FLILSPFLHLLDHGQDSEVCKSV*HHWMKD
Trigger: ATCTTTCATCCAGTGGTGGCATACTGACTTGCAGAC...CTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGAGAGAATTAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR GCA 90 bp TCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGGATCTAGAGAATTCTCTATCTGCTGGATaGATGAACAGGATTATGAGG +
Preference number: 4 (lower is better)
Translates to: SPFLHLLDHGQDSEDLENSLSAG*MNRIMR
Trigger: CCTCATAATCCTGTTCATGCATCCAGCAGATAGAGA...ATTCTCTAGATCCTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR GCA 90 bp GTGGCTAACTACTTAGACCGTGGACATTTTTGTTGCAGTGGTTGGCCTACTCTGTTCTCTCACTGCTGCTaGTCTTTTCTTTGCTTCTTA +
Preference number: 4 (lower is better)
Translates to: VANYLDRGHFCCSGWPTLFSHCC*SFLCFL
Trigger: TAAGAAGCAAAGAAAAGAGCAGCAGCAGTGAGAGAA...CAGAGTAGGCCAACCACTGCAACAAAAATGTCCACGGTCTAAGTAGTTAGCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641962.1
CDS-3UTR CCA 90 bp TCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGGATCTAGAGAATTCTTCTTTCCTCAGATaGGAAAAAGCAACCTCAGGT +
Preference number: 4 (lower is better)
Translates to: SPFLHLLDHGQDSEDLENSSFLR*EKATSG
Trigger: ACCTGAGGTTGCTTTTTCCCATCTGAGGAAAGAAGA...ATTCTCTAGATCCTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641278.1
CDS-3UTR CCA 90 bp TTCTTAATTCTCTCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGTCAGTATGCCACCACTaGATGAAAGATTACCCAGGT +
Preference number: 4 (lower is better)
Translates to: FLILSPFLHLLDHGQDSESVCHH*MKDYPG
Trigger: ACCTGGGTAATCTTTCATCCAGTGGTGGCATACTGA...CTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGAGAGAATTAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR CCA 90 bp TGGGCTTGCATTGTTCAGGTGGTCATAAATGGAGTTATTCTTCCCAACTTTTCTCTGGTCTTGAACTCTTaGGCTCAAGTGATCCCTCCA +
Preference number: 4 (lower is better)
Translates to: WACIVQVVINGVILPNFSLVLNS*AQVIPP
Trigger: TGGAGGGATCACTTGAGCCCAAGAGTTCAAGACCAG...AGAAAAGTTGGGAAGAATAACTCCATTTATGACCACCTGAACAATGCAAGCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR CCA 90 bp TTCTTAATTCTCTCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGCCTCAACAGAAATCATaGGCTTGCATTGTTCAGGTG +
Preference number: 4 (lower is better)
Translates to: FLILSPFLHLLDHGQDSEPQQKS*ACIVQV
Trigger: CACCTGAACAATGCAAGCCCATGATTTCTGTTGAGG...CTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGAGAGAATTAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR CCA 90 bp TTCTTAATTCTCTCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGGTGTGCCAGCTGCTATaGCTTGAGCTTTATCATAGT +
Preference number: 4 (lower is better)
Translates to: FLILSPFLHLLDHGQDSEVCQLL*LELYHS
Trigger: ACTATGATAAAGCTCAAGCCATAGCAGCTGGCACAC...CTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGAGAGAATTAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR CCA 90 bp GTTAGTTACATACATATACATGTGCCATGCTGGTGTGCTGTGCCCATTAACTCGGTAATTCTAGCATTTTaGGAGGCTGAAGTGGAGGGA +
Preference number: 4 (lower is better)
Translates to: VSYIHIHVPCWCAVPINSVILAF*EAEVEG
Trigger: TCCCTCCACTTCAGCCTCCCAAAATGCTAGAATTAC...CGAGTTAATGGGCACAGCACACCAGCATGGCACATGTATATGTATGTAACTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR CCA 90 bp TCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGGATCTAGAGAATTCCTTCATTTCGGTTTaGCTCTCTGTGTGTTCTAAG +
Preference number: 4 (lower is better)
Translates to: SPFLHLLDHGQDSEDLENSFISV*LSVCSK
Trigger: CTTAGAACACACAGAGAGCCAAACCGAAATGAAGGA...ATTCTCTAGATCCTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR CCA 90 bp TTCTTAATTCTCTCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGGTATATACCCAGCAATaGGATTGCTGCGTCAAATGG +
Preference number: 4 (lower is better)
Translates to: FLILSPFLHLLDHGQDSEVYTQQ*DCCVKW
Trigger: CCATTTGACGCAGCAATCCCATTGCTGGGTATATAC...CTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGAGAGAATTAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR TCA 90 bp GTTAGTTACATACATATACATGTGCCATGCTGGTGTGCTGTGCCCATTAACTCGTACCTTCTAATAGATTaGGTGGCACAGGTAAAGGAG +
Preference number: 4 (lower is better)
Translates to: VSYIHIHVPCWCAVPINSYLLID*VAQVKE
Trigger: CTCCTTTACCTGTGCCACTCAATCTATTAGAAGGTA...CGAGTTAATGGGCACAGCACACCAGCATGGCACATGTATATGTATGTAACTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR TCA 90 bp TGGGCTTGCATTGTTCAGGTGGTCATAAATGGAGTTATTCTTCCCAACTTTTCTACCAGCATTGGCCTGTaGCATGAGCAAGAAGTAAAC +
Preference number: 4 (lower is better)
Translates to: WACIVQVVINGVILPNFSTSIGL*HEQEVN
Trigger: GTTTACTTCTTGCTCATGTCACAGGCCAATGCTGGT...AGAAAAGTTGGGAAGAATAACTCCATTTATGACCACCTGAACAATGCAAGCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR TCA 90 bp TTTCTCAAAATCAAAGGAGCTGTCCACAGCCTCAACAGTGATTCTTCTCCTTTTAGAAGCCTGCATTTCTaGATGACAGTGTGGCACTGT +
Preference number: 4 (lower is better)
Translates to: FLKIKGAVHSLNSDSSPFRSLHF*MTVWHC
Trigger: ACAGTGCCACACTGTCATTCAGAAATGCAGGCTTCT...AAAAGGAGAAGAATCACTGTTGAGGCTGTGGACAGCTCCTTTGATTTTGAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR TCA 90 bp TGGGCTTGCATTGTTCAGGTGGTCATAAATGGAGTTATTCTTCCCAACTTTTCTAGAAGCCTGCATTTCTaGATGACAGTGTGGCACTGT +
Preference number: 4 (lower is better)
Translates to: WACIVQVVINGVILPNFSRSLHF*MTVWHC
Trigger: ACAGTGCCACACTGTCATTCAGAAATGCAGGCTTCT...AGAAAAGTTGGGAAGAATAACTCCATTTATGACCACCTGAACAATGCAAGCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR GCA 90 bp GTTAGTTACATACATATACATGTGCCATGCTGGTGTGCTGTGCCCATTAACTCGTCTCTATCTGCTGGATaGATGAACAGGATTATGAGG +
Preference number: 4 (lower is better)
Translates to: VSYIHIHVPCWCAVPINSSLSAG*MNRIMR
Trigger: CCTCATAATCCTGTTCATGCATCCAGCAGATAGAGA...CGAGTTAATGGGCACAGCACACCAGCATGGCACATGTATATGTATGTAACTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR CCA 90 bp GTGGCTAACTACTTAGACCGTGGACATTTTTGTTGCAGTGGTTGGCCTACTCTGCAGGAAATTTGGATCTaGCTAATCCTGCTATATAAG +
Preference number: 4 (lower is better)
Translates to: VANYLDRGHFCCSGWPTLQEIWI*LILLYK
Trigger: CTTATATAGCAGGATTAGCCAGATCCAAATTTCCTG...CAGAGTAGGCCAACCACTGCAACAAAAATGTCCACGGTCTAAGTAGTTAGCCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR CAA 72 bp TTAGGACTCGATGGTGGCCATAGGTATCTCTTTGTTTaGGGCATGAACAAGCTCCTTTCCCATTTTGAGAAA +
Preference number: 4 (lower is better)
Translates to: LGLDGGHRYLFV*GMNKLLSHFEK
Trigger: TTTCTCAAAATGGGAAAGGAGCTTGTTCATGCCCAAAACAAAGAGATACCTATGGCCACCATCGAGTCCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR TCA 90 bp TGGGCTTGCATTGTTCAGGTGGTCATAAATGGAGTTATTCTTCCCAACTTTTCTGATTACCCAGGTTTTTaGTTCAGTCATCCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: WACIVQVVINGVILPNFSDYPGF*FSHPRR
Trigger: TCTCCTGGGATGACTGAATCAAAAACCTGGGTAATC...AGAAAAGTTGGGAAGAATAACTCCATTTATGACCACCTGAACAATGCAAGCCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR TCA 90 bp TGGGCTTGCATTGTTCAGGTGGTCATAAATGGAGTTATTCTTCCCAACTTTTCTTGGAAGAAGAACATTTaGGTGACACAGCCACTGAAG +
Preference number: 4 (lower is better)
Translates to: WACIVQVVINGVILPNFSWKKNI*VTQPLK
Trigger: CTTCAGTGGCTGTGTCACTCAAATGTTCTTCTTCCA...AGAAAAGTTGGGAAGAATAACTCCATTTATGACCACCTGAACAATGCAAGCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR TCA 90 bp GTTAGTTACATACATATACATGTGCCATGCTGGTGTGCTGTGCCCATTAACTCGATGCCTCCAGGAAGGTaGCTACATTTAATCTTTTTG +
Preference number: 4 (lower is better)
Translates to: VSYIHIHVPCWCAVPINSMPPGR*LHLIFL
Trigger: CAAAAAGATTAAATGTAGTCACCTTCCTGGAGGCAT...CGAGTTAATGGGCACAGCACACCAGCATGGCACATGTATATGTATGTAACTAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR TCA 90 bp TCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGGATCTAGAGAATAGTGATTCTTCTTTATaGACACTCTCACTAACAGCA +
Preference number: 4 (lower is better)
Translates to: SPFLHLLDHGQDSEDLENSDSSL*TLSLTA
Trigger: TGCTGTTAGTGAGAGTGTTCATAAAGAAGAATCACT...ATTCTCTAGATCCTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR TCA 90 bp TCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGGATCTAGAGAATAATGTAACCCAACTGTaGTTTCTTAGCAGTGAATCT +
Preference number: 4 (lower is better)
Translates to: SPFLHLLDHGQDSEDLENNVTQL*FLSSES
Trigger: AGATTCACTGCTAAGAAATCACAGTTGGGTTACATT...ATTCTCTAGATCCTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR TCA 90 bp TTTCTCAAAATCAAAGGAGCTGTCCACAGCCTCAACAGTGATTCTTCTCCTTTTGAGAGTTGCTTTCTATaGGGATTGTCTTCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: FLKIKGAVHSLNSDSSPFESCFL*GLSSWP
Trigger: AGGCCAAGAAGACAATCCTCATAGAAAGCAACTCTC...AAAAGGAGAAGAATCACTGTTGAGGCTGTGGACAGCTCCTTTGATTTTGAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR TCA 90 bp TTCTTAATTCTCTCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGAAGTTTGGGAATAAGTaGGAGTTGCTTTCTATGAGG +
Preference number: 4 (lower is better)
Translates to: FLILSPFLHLLDHGQDSEKFGNK*ELLSMR
Trigger: CCTCATAGAAAGCAACTCTCACTTATTCCCAAACTT...CTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGAGAGAATTAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR GCA 90 bp TTTCTCAAAATCAAAGGAGCTGTCCACAGCCTCAACAGTGATTCTTCTCCTTTTGTCTGCAAGTCAGTATaGCACCACTGGATGAAAGAT +
Preference number: 4 (lower is better)
Translates to: FLKIKGAVHSLNSDSSPFVCKSV*HHWMKD
Trigger: ATCTTTCATCCAGTGGTGGCATACTGACTTGCAGAC...AAAAGGAGAAGAATCACTGTTGAGGCTGTGGACAGCTCCTTTGATTTTGAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR GCA 90 bp TTTCTCAAAATCAAAGGAGCTGTCCACAGCCTCAACAGTGATTCTTCTCCTTTTGTATTACGCCATGGCTaGACTGAGTTCACTGTTACA +
Preference number: 4 (lower is better)
Translates to: FLKIKGAVHSLNSDSSPFVLRHG*TEFTVT
Trigger: TGTAACAGTGAACTCAGTGCAGCCATGGCGTAATAC...AAAAGGAGAAGAATCACTGTTGAGGCTGTGGACAGCTCCTTTGATTTTGAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR GCA 90 bp TGGGCTTGCATTGTTCAGGTGGTCATAAATGGAGTTATTCTTCCCAACTTTTCTTATCTCATGGAACCCTaGCCTTCTAGTCTACTGTCA +
Preference number: 4 (lower is better)
Translates to: WACIVQVVINGVILPNFSYLMEP*PSSLLS
Trigger: TGACAGTAGACTAGAAGGGCAGGGTTCCATGAGATA...AGAAAAGTTGGGAAGAATAACTCCATTTATGACCACCTGAACAATGCAAGCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR GCA 90 bp TTTCTCAAAATCAAAGGAGCTGTCCACAGCCTCAACAGTGATTCTTCTCCTTTTACATACATATACATGTaGCATGCTGGTGTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: FLKIKGAVHSLNSDSSPFTYIYM*HAGVLC
Trigger: GCACAGCACACCAGCATGGCACATGTATATGTATGT...AAAAGGAGAAGAATCACTGTTGAGGCTGTGGACAGCTCCTTTGATTTTGAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR GCA 90 bp GTGGCTAACTACTTAGACCGTGGACATTTTTGTTGCAGTGGTTGGCCTACTCTGTACATGTGCACAATGTaGAGGTTAGTTACATACATA +
Preference number: 4 (lower is better)
Translates to: VANYLDRGHFCCSGWPTLYMCTM*RLVTYI
Trigger: TATGTATGTAACTAACCTGCACATTGTGCACATGTA...CAGAGTAGGCCAACCACTGCAACAAAAATGTCCACGGTCTAAGTAGTTAGCCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR CCA 90 bp TCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGGATCTAGAGAATTACTTTACTACATTTTaGCCACCTGTATTAGTCTCC +
Preference number: 4 (lower is better)
Translates to: SPFLHLLDHGQDSEDLENYFTTF*PPVLVS
Trigger: GGAGACTAATACAGGTGGCCAAAATGTAGTAAAGTA...ATTCTCTAGATCCTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641278.1
CDS-3UTR CCA 90 bp TTTCTCAAAATCAAAGGAGCTGTCCACAGCCTCAACAGTGATTCTTCTCCTTTTTCAGTATGCCACCACTaGATGAAAGATTACCCAGGT +
Preference number: 4 (lower is better)
Translates to: FLKIKGAVHSLNSDSSPFSVCHH*MKDYPG
Trigger: ACCTGGGTAATCTTTCATCCAGTGGTGGCATACTGA...AAAAGGAGAAGAATCACTGTTGAGGCTGTGGACAGCTCCTTTGATTTTGAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR CCA 90 bp GTGGCTAACTACTTAGACCGTGGACATTTTTGTTGCAGTGGTTGGCCTACTCTGATAAGACACCTCATGTaGACAAGTACATGTTGTTTT +
Preference number: 4 (lower is better)
Translates to: VANYLDRGHFCCSGWPTLIRHLM*TSTCCF
Trigger: AAAACAACATGTACTTGTCCACATGAGGTGTCTTAT...CAGAGTAGGCCAACCACTGCAACAAAAATGTCCACGGTCTAAGTAGTTAGCCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR CCA 90 bp TTTCTCAAAATCAAAGGAGCTGTCCACAGCCTCAACAGTGATTCTTCTCCTTTTGTGTGCCAGCTGCTATaGCTTGAGCTTTATCATAGT +
Preference number: 4 (lower is better)
Translates to: FLKIKGAVHSLNSDSSPFVCQLL*LELYHS
Trigger: ACTATGATAAAGCTCAAGCCATAGCAGCTGGCACAC...AAAAGGAGAAGAATCACTGTTGAGGCTGTGGACAGCTCCTTTGATTTTGAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR CCA 90 bp TTTCTCAAAATCAAAGGAGCTGTCCACAGCCTCAACAGTGATTCTTCTCCTTTTGTAATTCTAGCATTTTaGGAGGCTGAAGTGGAGGGA +
Preference number: 4 (lower is better)
Translates to: FLKIKGAVHSLNSDSSPFVILAF*EAEVEG
Trigger: TCCCTCCACTTCAGCCTCCCAAAATGCTAGAATTAC...AAAAGGAGAAGAATCACTGTTGAGGCTGTGGACAGCTCCTTTGATTTTGAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR TCA 90 bp GTTAGTTACATACATATACATGTGCCATGCTGGTGTGCTGTGCCCATTAACTCGGCTGCTCAAAGTGAGTaGTTTTATTATCTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: VSYIHIHVPCWCAVPINSAAQSE*FYYLLS
Trigger: GGAAAGAAGATAATAAAATCACTCACTTTGAGCAGC...CGAGTTAATGGGCACAGCACACCAGCATGGCACATGTATATGTATGTAACTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641278.1
CDS-3UTR TCA 90 bp TGGGCTTGCATTGTTCAGGTGGTCATAAATGGAGTTATTCTTCCCAACTTTTCTTATGCCACCACTGGATaGAAGATTACCCAGGTTTTT +
Preference number: 4 (lower is better)
Translates to: WACIVQVVINGVILPNFSYATTG*KITQVF
Trigger: AAAAACCTGGGTAATCTTTCATCCAGTGGTGGCATA...AGAAAAGTTGGGAAGAATAACTCCATTTATGACCACCTGAACAATGCAAGCCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR TCA 90 bp TTTCTCAAAATCAAAGGAGCTGTCCACAGCCTCAACAGTGATTCTTCTCCTTTTTCTTTGTTTTGGGCATaGACAAGCTCCTTTCCCATT +
Preference number: 4 (lower is better)
Translates to: FLKIKGAVHSLNSDSSPFSLFWA*TSSFPI
Trigger: AATGGGAAAGGAGCTTGTTCATGCCCAAAACAAAGA...AAAAGGAGAAGAATCACTGTTGAGGCTGTGGACAGCTCCTTTGATTTTGAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR TCA 90 bp TTTCTCAAAATCAAAGGAGCTGTCCACAGCCTCAACAGTGATTCTTCTCCTTTTAGGAAATTATGTCCTTaGAGTGAATTGGGGATCCTC +
Preference number: 4 (lower is better)
Translates to: FLKIKGAVHSLNSDSSPFRKLCP*SELGIL
Trigger: GAGGATCCCCAATTCACTTCAAGGACATAATTTCCT...AAAAGGAGAAGAATCACTGTTGAGGCTGTGGACAGCTCCTTTGATTTTGAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR TCA 90 bp GTTAGTTACATACATATACATGTGCCATGCTGGTGTGCTGTGCCCATTAACTCGAGTGATTCTTCTTTATaGACACTCTCACTAACAGCA +
Preference number: 4 (lower is better)
Translates to: VSYIHIHVPCWCAVPINSSDSSL*TLSLTA
Trigger: TGCTGTTAGTGAGAGTGTTCATAAAGAAGAATCACT...CGAGTTAATGGGCACAGCACACCAGCATGGCACATGTATATGTATGTAACTAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR TCA 90 bp TTCTTAATTCTCTCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGAATGTAACCCAACTGTaGTTTCTTAGCAGTGAATCT +
Preference number: 4 (lower is better)
Translates to: FLILSPFLHLLDHGQDSENVTQL*FLSSES
Trigger: AGATTCACTGCTAAGAAATCACAGTTGGGTTACATT...CTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGAGAGAATTAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR TCA 90 bp TGGGCTTGCATTGTTCAGGTGGTCATAAATGGAGTTATTCTTCCCAACTTTTCTTTGTCTTTGCTACTGTaGACATACAGGTGCATGTGT +
Preference number: 4 (lower is better)
Translates to: WACIVQVVINGVILPNFSLSLLL*TYRCMC
Trigger: ACACATGCACCTGTATGTTCACAGTAGCAAAGACAA...AGAAAAGTTGGGAAGAATAACTCCATTTATGACCACCTGAACAATGCAAGCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR GCA 90 bp TCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGGATCTAGAGAATACATGTTGTTTTCCTTaGTTGGATTGTTCTTTTCTG +
Preference number: 4 (lower is better)
Translates to: SPFLHLLDHGQDSEDLENTCCFP*LDCSFL
Trigger: CAGAAAAGAACAATCCAAGCAAGGAAAACAACATGT...ATTCTCTAGATCCTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR GCA 90 bp TTTCTCAAAATCAAAGGAGCTGTCCACAGCCTCAACAGTGATTCTTCTCCTTTTCAGAAATCATGGGCTTaGATTGTTCAGGTGGTCATA +
Preference number: 4 (lower is better)
Translates to: FLKIKGAVHSLNSDSSPFQKSWA*IVQVVI
Trigger: TATGACCACCTGAACAATGCAAGCCCATGATTTCTG...AAAAGGAGAAGAATCACTGTTGAGGCTGTGGACAGCTCCTTTGATTTTGAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR GCA 90 bp TGGGCTTGCATTGTTCAGGTGGTCATAAATGGAGTTATTCTTCCCAACTTTTCTAAGTTCTCTCACTGCTaGTGCTCTTTTCTTTGCTTC +
Preference number: 4 (lower is better)
Translates to: WACIVQVVINGVILPNFSKFSHC*CSFLCF
Trigger: GAAGCAAAGAAAAGAGCAGCAGCAGTGAGAGAACTT...AGAAAAGTTGGGAAGAATAACTCCATTTATGACCACCTGAACAATGCAAGCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641962.1
CDS-3UTR CCA 90 bp TTCTTAATTCTCTCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGCAGGAAATTTGGATCTaGCTAATCCTGCTATATAAG +
Preference number: 4 (lower is better)
Translates to: FLILSPFLHLLDHGQDSEQEIWI*LILLYK
Trigger: CTTATATAGCAGGATTAGCCAGATCCAAATTTCCTG...CTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGAGAGAATTAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR CCA 90 bp TTTCTCAAAATCAAAGGAGCTGTCCACAGCCTCAACAGTGATTCTTCTCCTTTTTCCTTCATTTCGGTTTaGCTCTCTGTGTGTTCTAAG +
Preference number: 4 (lower is better)
Translates to: FLKIKGAVHSLNSDSSPFSFISV*LSVCSK
Trigger: CTTAGAACACACAGAGAGCCAAACCGAAATGAAGGA...AAAAGGAGAAGAATCACTGTTGAGGCTGTGGACAGCTCCTTTGATTTTGAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR CCA 90 bp GTTAGTTACATACATATACATGTGCCATGCTGGTGTGCTGTGCCCATTAACTCGCTGCATAGTACCCCATaGTGTATAATGTATCACATT +
Preference number: 4 (lower is better)
Translates to: VSYIHIHVPCWCAVPINSLHSTP*CIMYHI
Trigger: AATGTGATACATTATACACCATGGGGTACTATGCAG...CGAGTTAATGGGCACAGCACACCAGCATGGCACATGTATATGTATGTAACTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR TCA 90 bp TGGGCTTGCATTGTTCAGGTGGTCATAAATGGAGTTATTCTTCCCAACTTTTCTATGCCTCCAGGAAGGTaGCTACATTTAATCTTTTTG +
Preference number: 4 (lower is better)
Translates to: WACIVQVVINGVILPNFSMPPGR*LHLIFL
Trigger: CAAAAAGATTAAATGTAGTCACCTTCCTGGAGGCAT...AGAAAAGTTGGGAAGAATAACTCCATTTATGACCACCTGAACAATGCAAGCCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR TCA 90 bp TTTCTCAAAATCAAAGGAGCTGTCCACAGCCTCAACAGTGATTCTTCTCCTTTTAAGTTTGGGAATAAGTaGGAGTTGCTTTCTATGAGG +
Preference number: 4 (lower is better)
Translates to: FLKIKGAVHSLNSDSSPFKFGNK*ELLSMR
Trigger: CCTCATAGAAAGCAACTCTCACTTATTCCCAAACTT...AAAAGGAGAAGAATCACTGTTGAGGCTGTGGACAGCTCCTTTGATTTTGAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR GCA 90 bp TTCTTAATTCTCTCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGACATGTTGTTTTCCTTaGTTGGATTGTTCTTTTCTG +
Preference number: 4 (lower is better)
Translates to: FLILSPFLHLLDHGQDSETCCFP*LDCSFL
Trigger: CAGAAAAGAACAATCCAAGCAAGGAAAACAACATGT...CTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGAGAGAATTAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR GCA 90 bp TTCTTAATTCTCTCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGTTCTTTCTTTGCGCATaGTGGTTTCTTTTTGTCTTT +
Preference number: 4 (lower is better)
Translates to: FLILSPFLHLLDHGQDSEFFLCA*WFLFVF
Trigger: AAAGACAAAAAGAAACCAGCATGCGCAAAGAAAGAA...CTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGAGAGAATTAAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR GCA 90 bp TTTCTCAAAATCAAAGGAGCTGTCCACAGCCTCAACAGTGATTCTTCTCCTTTTAGGCGTGTGCCACCATaGTCTGCTAATTTTTATATT +
Preference number: 4 (lower is better)
Translates to: FLKIKGAVHSLNSDSSPFRRVPP*SANFYI
Trigger: AATATAAAAATTAGCAGAGCATGGTGGCACACGCCT...AAAAGGAGAAGAATCACTGTTGAGGCTGTGGACAGCTCCTTTGATTTTGAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR GCA 90 bp TGGGCTTGCATTGTTCAGGTGGTCATAAATGGAGTTATTCTTCCCAACTTTTCTAGGCGTGTGCCACCATaGTCTGCTAATTTTTATATT +
Preference number: 4 (lower is better)
Translates to: WACIVQVVINGVILPNFSRRVPP*SANFYI
Trigger: AATATAAAAATTAGCAGAGCATGGTGGCACACGCCT...AGAAAAGTTGGGAAGAATAACTCCATTTATGACCACCTGAACAATGCAAGCCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR GCA 90 bp GTTAGTTACATACATATACATGTGCCATGCTGGTGTGCTGTGCCCATTAACTCGTACATGTGCACAATGTaGAGGTTAGTTACATACATA +
Preference number: 4 (lower is better)
Translates to: VSYIHIHVPCWCAVPINSYMCTM*RLVTYI
Trigger: TATGTATGTAACTAACCTGCACATTGTGCACATGTA...CGAGTTAATGGGCACAGCACACCAGCATGGCACATGTATATGTATGTAACTAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR CCA 90 bp GTTAGTTACATACATATACATGTGCCATGCTGGTGTGCTGTGCCCATTAACTCGATAAGACACCTCATGTaGACAAGTACATGTTGTTTT +
Preference number: 4 (lower is better)
Translates to: VSYIHIHVPCWCAVPINSIRHLM*TSTCCF
Trigger: AAAACAACATGTACTTGTCCACATGAGGTGTCTTAT...CGAGTTAATGGGCACAGCACACCAGCATGGCACATGTATATGTATGTAACTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR CCA 90 bp TTTCTCAAAATCAAAGGAGCTGTCCACAGCCTCAACAGTGATTCTTCTCCTTTTTTTCACAACAGAGACTaGCAAATTCTCAGGTTCACT +
Preference number: 4 (lower is better)
Translates to: FLKIKGAVHSLNSDSSPFFHNRD*QILRFT
Trigger: AGTGAACCTGAGAATTTGCCAGTCTCTGTTGTGAAA...AAAAGGAGAAGAATCACTGTTGAGGCTGTGGACAGCTCCTTTGATTTTGAGAAA
40% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
3UTR CAA 72 bp CATGCTTTTTATACCCTTTCTTTACCTTCTAATAGATaGAGTGGCACAGGTAAAGGAGTGGTGAGATCACTG +
Preference number: 4 (lower is better)
Translates to: HAFYTLSLPSNR*SGTGKGVVRSL
Trigger: CAGTGATCTCACCACTCCTTTACCTGTGCCACTCAATCTATTAGAAGGTAAAGAAAGGGTATAAAAAGCATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR TCA 90 bp TTTCTCAAAATCAAAGGAGCTGTCCACAGCCTCAACAGTGATTCTTCTCCTTTTAAATTGATCCTCTTATaGTGCCTCAGCTGCATTTTA +
Preference number: 4 (lower is better)
Translates to: FLKIKGAVHSLNSDSSPFKLILL*CLSCIL
Trigger: TAAAATGCAGCTGAGGCATCATAAGAGGATCAATTT...AAAAGGAGAAGAATCACTGTTGAGGCTGTGGACAGCTCCTTTGATTTTGAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000641962.1
CDS-3UTR GCA 90 bp TTTCTCAAAATCAAAGGAGCTGTCCACAGCCTCAACAGTGATTCTTCTCCTTTTTGCTGCTCTTTTCTTTaGTTCTTAAGAGTCTTGACT +
Preference number: 4 (lower is better)
Translates to: FLKIKGAVHSLNSDSSPFCCSFL*FLRVLT
Trigger: AGTCAAGACTCTTAAGAAGCAAAGAAAAGAGCAGCA...AAAAGGAGAAGAATCACTGTTGAGGCTGTGGACAGCTCCTTTGATTTTGAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000641962.1
CDS-3UTR CCA 90 bp TTTCTCAAAATCAAAGGAGCTGTCCACAGCCTCAACAGTGATTCTTCTCCTTTTACTGTTACACAAATGTaGCACAATCTCACCTCATTT +
Preference number: 4 (lower is better)
Translates to: FLKIKGAVHSLNSDSSPFTVTQM*HNLTSF
Trigger: AAATGAGGTGAGATTGTGCCACATTTGTGTAACAGT...AAAAGGAGAAGAATCACTGTTGAGGCTGTGGACAGCTCCTTTGATTTTGAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR CCA 90 bp TTTCTCAAAATCAAAGGAGCTGTCCACAGCCTCAACAGTGATTCTTCTCCTTTTTCAGGTGGTCATAAATaGAGTTATTCTTCCCAACTT +
Preference number: 4 (lower is better)
Translates to: FLKIKGAVHSLNSDSSPFSGGHK*SYSSQL
Trigger: AAGTTGGGAAGAATAACTCCATTTATGACCACCTGA...AAAAGGAGAAGAATCACTGTTGAGGCTGTGGACAGCTCCTTTGATTTTGAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR CCA 90 bp TTTCTCAAAATCAAAGGAGCTGTCCACAGCCTCAACAGTGATTCTTCTCCTTTTCTGCATAGTACCCCATaGTGTATAATGTATCACATT +
Preference number: 4 (lower is better)
Translates to: FLKIKGAVHSLNSDSSPFLHSTP*CIMYHI
Trigger: AATGTGATACATTATACACCATGGGGTACTATGCAG...AAAAGGAGAAGAATCACTGTTGAGGCTGTGGACAGCTCCTTTGATTTTGAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR CAA 90 bp TCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGGATCTAGAGAATTGGCTCGCTGCACCCTaGACTTCCCCAGGCTCAAGT +
Preference number: 5 (lower is better)
Translates to: SPFLHLLDHGQDSEDLENWLAAP*TSPGSS
Trigger: ACTTGAGCCTGGGGAAGTCAAGGGTGCAGCGAGCCA...ATTCTCTAGATCCTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR CAA 90 bp GTGGCTAACTACTTAGACCGTGGACATTTTTGTTGCAGTGGTTGGCCTACTCTGCAGGGTCTCACTCTTTaGCCCAGGTGGGAGTACGGT +
Preference number: 5 (lower is better)
Translates to: VANYLDRGHFCCSGWPTLQGLTL*PRWEYG
Trigger: ACCGTACTCCCACCTGGGCAAAAGAGTGAGACCCTG...CAGAGTAGGCCAACCACTGCAACAAAAATGTCCACGGTCTAAGTAGTTAGCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR CAA 90 bp TTCTTAATTCTCTCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGTGGCTCGCTGCACCCTaGACTTCCCCAGGCTCAAGT +
Preference number: 5 (lower is better)
Translates to: FLILSPFLHLLDHGQDSEWLAAP*TSPGSS
Trigger: ACTTGAGCCTGGGGAAGTCAAGGGTGCAGCGAGCCA...CTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGAGAGAATTAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR CAA 90 bp TCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGGATCTAGAGAATTGGGGTTTCACCATGTaGGTCAAGCTGGCCTCGATC +
Preference number: 5 (lower is better)
Translates to: SPFLHLLDHGQDSEDLENWGFTM*VKLASI
Trigger: GATCGAGGCCAGCTTGACCAACATGGTGAAACCCCA...ATTCTCTAGATCCTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR CAA 90 bp GTGGCTAACTACTTAGACCGTGGACATTTTTGTTGCAGTGGTTGGCCTACTCTGTTCTGCAGACCAGCATaGGCCTGTGACATGAGCAAG +
Preference number: 5 (lower is better)
Translates to: VANYLDRGHFCCSGWPTLFCRPA*ACDMSK
Trigger: CTTGCTCATGTCACAGGCCAATGCTGGTCTGCAGAA...CAGAGTAGGCCAACCACTGCAACAAAAATGTCCACGGTCTAAGTAGTTAGCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR CAA 90 bp GTTAGTTACATACATATACATGTGCCATGCTGGTGTGCTGTGCCCATTAACTCGGCTGGTCTTGAACTCTaGGGCTCAAGTGATCCCTCC +
Preference number: 5 (lower is better)
Translates to: VSYIHIHVPCWCAVPINSAGLEL*GSSDPS
Trigger: GGAGGGATCACTTGAGCCCAAGAGTTCAAGACCAGC...CGAGTTAATGGGCACAGCACACCAGCATGGCACATGTATATGTATGTAACTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR CAA 90 bp TCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGGATCTAGAGAATGCCAGCTGCTATGGCTaGAGCTTTATCATAGTGGGG +
Preference number: 5 (lower is better)
Translates to: SPFLHLLDHGQDSEDLENASCYG*SFIIVG
Trigger: CCCCACTATGATAAAGCTCAAGCCATAGCAGCTGGC...ATTCTCTAGATCCTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR CAA 90 bp TCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGGATCTAGAGAATAAGTGTCTTGATCTGTaGCTCAGGCTGGAGTGCAGT +
Preference number: 5 (lower is better)
Translates to: SPFLHLLDHGQDSEDLENKCLDL*LRLECS
Trigger: ACTGCACTCCAGCCTGAGCAACAGATCAAGACACTT...ATTCTCTAGATCCTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR CAA 90 bp TCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGGATCTAGAGAATCCGTGGACATTTTTGTaGCAGTGGTTGGCCTACTCT +
Preference number: 5 (lower is better)
Translates to: SPFLHLLDHGQDSEDLENPWTFL*QWLAYS
Trigger: AGAGTAGGCCAACCACTGCAACAAAAATGTCCACGG...ATTCTCTAGATCCTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR CAA 90 bp GTTAGTTACATACATATACATGTGCCATGCTGGTGTGCTGTGCCCATTAACTCGTTCTGCAGACCAGCATaGGCCTGTGACATGAGCAAG +
Preference number: 5 (lower is better)
Translates to: VSYIHIHVPCWCAVPINSFCRPA*ACDMSK
Trigger: CTTGCTCATGTCACAGGCCAATGCTGGTCTGCAGAA...CGAGTTAATGGGCACAGCACACCAGCATGGCACATGTATATGTATGTAACTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR CAA 90 bp TGGGCTTGCATTGTTCAGGTGGTCATAAATGGAGTTATTCTTCCCAACTTTTCTCAGGGTCTCACTCTTTaGCCCAGGTGGGAGTACGGT +
Preference number: 5 (lower is better)
Translates to: WACIVQVVINGVILPNFSQGLTL*PRWEYG
Trigger: ACCGTACTCCCACCTGGGCAAAAGAGTGAGACCCTG...AGAAAAGTTGGGAAGAATAACTCCATTTATGACCACCTGAACAATGCAAGCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR CAA 90 bp GTGGCTAACTACTTAGACCGTGGACATTTTTGTTGCAGTGGTTGGCCTACTCTGATCCCAGGGTTTACCTaGATCATTTCCCTCTTCCTT +
Preference number: 5 (lower is better)
Translates to: VANYLDRGHFCCSGWPTLIPGFT*IISLFL
Trigger: AAGGAAGAGGGAAATGATCAAGGTAAACCCTGGGAT...CAGAGTAGGCCAACCACTGCAACAAAAATGTCCACGGTCTAAGTAGTTAGCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR CAA 90 bp GTGGCTAACTACTTAGACCGTGGACATTTTTGTTGCAGTGGTTGGCCTACTCTGGAAACAACAGGAAATTaGGATCTGGCTAATCCTGCT +
Preference number: 5 (lower is better)
Translates to: VANYLDRGHFCCSGWPTLETTGN*DLANPA
Trigger: AGCAGGATTAGCCAGATCCAAATTTCCTGTTGTTTC...CAGAGTAGGCCAACCACTGCAACAAAAATGTCCACGGTCTAAGTAGTTAGCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR CAA 90 bp TTTCTCAAAATCAAAGGAGCTGTCCACAGCCTCAACAGTGATTCTTCTCCTTTTGCCAGCTGCTATGGCTaGAGCTTTATCATAGTGGGG +
Preference number: 5 (lower is better)
Translates to: FLKIKGAVHSLNSDSSPFASCYG*SFIIVG
Trigger: CCCCACTATGATAAAGCTCAAGCCATAGCAGCTGGC...AAAAGGAGAAGAATCACTGTTGAGGCTGTGGACAGCTCCTTTGATTTTGAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR CAA 90 bp TTCTTAATTCTCTCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGATGAGGATTGTCTTCTaGGCCTATCTTCTTGGGGCA +
Preference number: 5 (lower is better)
Translates to: FLILSPFLHLLDHGQDSEMRIVF*AYLLGA
Trigger: TGCCCCAAGAAGATAGGCCAAGAAGACAATCCTCAT...CTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGAGAGAATTAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR CAA 90 bp GTTAGTTACATACATATACATGTGCCATGCTGGTGTGCTGTGCCCATTAACTCGATGAGGATTGTCTTCTaGGCCTATCTTCTTGGGGCA +
Preference number: 5 (lower is better)
Translates to: VSYIHIHVPCWCAVPINSMRIVF*AYLLGA
Trigger: TGCCCCAAGAAGATAGGCCAAGAAGACAATCCTCAT...CGAGTTAATGGGCACAGCACACCAGCATGGCACATGTATATGTATGTAACTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR CAA 90 bp TTCTTAATTCTCTCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGAGGCCTCAGTGTCTTTaGTTCCCATCTTTGTGTCCA +
Preference number: 5 (lower is better)
Translates to: FLILSPFLHLLDHGQDSERPQCL*FPSLCP
Trigger: TGGACACAAAGATGGGAACAAAAGACACTGAGGCCT...CTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGAGAGAATTAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR CAA 90 bp GTGGCTAACTACTTAGACCGTGGACATTTTTGTTGCAGTGGTTGGCCTACTCTGTGTTACATGAGTAAATaGTGTGTTGCTGGGGTTTGG +
Preference number: 5 (lower is better)
Translates to: VANYLDRGHFCCSGWPTLCYMSK*CVAGVW
Trigger: CCAAACCCCAGCAACACACAATTTACTCATGTAACA...CAGAGTAGGCCAACCACTGCAACAAAAATGTCCACGGTCTAAGTAGTTAGCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR CAA 90 bp GTGGCTAACTACTTAGACCGTGGACATTTTTGTTGCAGTGGTTGGCCTACTCTGCTACTTTACTACATTTaGGCCACCTGTATTAGTCTC +
Preference number: 5 (lower is better)
Translates to: VANYLDRGHFCCSGWPTLLLYYI*ATCISL
Trigger: GAGACTAATACAGGTGGCCAAAATGTAGTAAAGTAG...CAGAGTAGGCCAACCACTGCAACAAAAATGTCCACGGTCTAAGTAGTTAGCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641278.1
CDS-3UTR CAA 90 bp TTTCTCAAAATCAAAGGAGCTGTCCACAGCCTCAACAGTGATTCTTCTCCTTTTAAGTGTCTTGATCTGTaGCTCAGGCTGGAGTGCAGT +
Preference number: 5 (lower is better)
Translates to: FLKIKGAVHSLNSDSSPFKCLDL*LRLECS
Trigger: ACTGCACTCCAGCCTGAGCAACAGATCAAGACACTT...AAAAGGAGAAGAATCACTGTTGAGGCTGTGGACAGCTCCTTTGATTTTGAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR CAA 90 bp TTCTTAATTCTCTCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGACAGAAATCATGGGCTaGCATTGTTCAGGTGGTCAT +
Preference number: 5 (lower is better)
Translates to: FLILSPFLHLLDHGQDSETEIMG*HCSGGH
Trigger: ATGACCACCTGAACAATGCAAGCCCATGATTTCTGT...CTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGAGAGAATTAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR CAA 90 bp TGGGCTTGCATTGTTCAGGTGGTCATAAATGGAGTTATTCTTCCCAACTTTTCTCCGTGGACATTTTTGTaGCAGTGGTTGGCCTACTCT +
Preference number: 5 (lower is better)
Translates to: WACIVQVVINGVILPNFSPWTFL*QWLAYS
Trigger: AGAGTAGGCCAACCACTGCAACAAAAATGTCCACGG...AGAAAAGTTGGGAAGAATAACTCCATTTATGACCACCTGAACAATGCAAGCCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR CAA 90 bp TGGGCTTGCATTGTTCAGGTGGTCATAAATGGAGTTATTCTTCCCAACTTTTCTAGACCGTGGACATTTTaGTTGCAGTGGTTGGCCTAC +
Preference number: 5 (lower is better)
Translates to: WACIVQVVINGVILPNFSRPWTF*LQWLAY
Trigger: GTAGGCCAACCACTGCAACAAAAATGTCCACGGTCT...AGAAAAGTTGGGAAGAATAACTCCATTTATGACCACCTGAACAATGCAAGCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR CAA 90 bp TCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGGATCTAGAGAATAAGTGGAGGGATCATTaGAGTCCAAGAATTTCAACC +
Preference number: 5 (lower is better)
Translates to: SPFLHLLDHGQDSEDLENKWRDH*SPRIST
Trigger: GGTTGAAATTCTTGGACTCAAATGATCCCTCCACTT...ATTCTCTAGATCCTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR CAA 90 bp TCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGGATCTAGAGAATTGTTACATGAGTAAATaGTGTGTTGCTGGGGTTTGG +
Preference number: 5 (lower is better)
Translates to: SPFLHLLDHGQDSEDLENCYMSK*CVAGVW
Trigger: CCAAACCCCAGCAACACACAATTTACTCATGTAACA...ATTCTCTAGATCCTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS TCA 90 bp TATCAGGTTCATCTTGTGTCTGCAAGTCAGTATGCCACCACTGGATaGAAGATTACCCAGGTTTTTGATTCAGTCATCCCAGGAGACAAA +
Preference number: 5 (lower is better)
Translates to: YQVHLVSASQYATTG*KITQVFDSVIPGDK
Trigger: TTTGTCTCCTGGGATGACTGAATCAAAAACCTGGGTAATCTTTCATCCAGTGGTGGCATACTGACTTGCAGACACAAGATGAACCTGATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR CAA 90 bp GTTAGTTACATACATATACATGTGCCATGCTGGTGTGCTGTGCCCATTAACTCGAGGTATCTCTTTGTTTaGGGCATGAACAAGCTCCTT +
Preference number: 5 (lower is better)
Translates to: VSYIHIHVPCWCAVPINSRYLFV*GMNKLL
Trigger: AAGGAGCTTGTTCATGCCCAAAACAAAGAGATACCT...CGAGTTAATGGGCACAGCACACCAGCATGGCACATGTATATGTATGTAACTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR CAA 90 bp TTCTTAATTCTCTCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGAGGTATCTCTTTGTTTaGGGCATGAACAAGCTCCTT +
Preference number: 5 (lower is better)
Translates to: FLILSPFLHLLDHGQDSERYLFV*GMNKLL
Trigger: AAGGAGCTTGTTCATGCCCAAAACAAAGAGATACCT...CTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGAGAGAATTAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR CAA 90 bp GTTAGTTACATACATATACATGTGCCATGCTGGTGTGCTGTGCCCATTAACTCGAAGCCCATGAAAAGTTaGGGAATAAGTGAGAGTTGC +
Preference number: 5 (lower is better)
Translates to: VSYIHIHVPCWCAVPINSKPMKS*GISESC
Trigger: GCAACTCTCACTTATTCCCAAACTTTTCATGGGCTT...CGAGTTAATGGGCACAGCACACCAGCATGGCACATGTATATGTATGTAACTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR CAA 90 bp TTCTTAATTCTCTCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGAAGCCCATGAAAAGTTaGGGAATAAGTGAGAGTTGC +
Preference number: 5 (lower is better)
Translates to: FLILSPFLHLLDHGQDSEKPMKS*GISESC
Trigger: GCAACTCTCACTTATTCCCAAACTTTTCATGGGCTT...CTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGAGAGAATTAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR CAA 90 bp TGGGCTTGCATTGTTCAGGTGGTCATAAATGGAGTTATTCTTCCCAACTTTTCTTGTTCCTGCATTAATTaGCTTAGGATCACGGCCTCC +
Preference number: 5 (lower is better)
Translates to: WACIVQVVINGVILPNFSCSCIN*LRITAS
Trigger: GGAGGCCGTGATCCTAAGCAAATTAATGCAGGAACA...AGAAAAGTTGGGAAGAATAACTCCATTTATGACCACCTGAACAATGCAAGCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR CAA 90 bp TGGGCTTGCATTGTTCAGGTGGTCATAAATGGAGTTATTCTTCCCAACTTTTCTAGATTACCCAGGTTTTaGATTCAGTCATCCCAGGAG +
Preference number: 5 (lower is better)
Translates to: WACIVQVVINGVILPNFSRLPRF*IQSSQE
Trigger: CTCCTGGGATGACTGAATCAAAAACCTGGGTAATCT...AGAAAAGTTGGGAAGAATAACTCCATTTATGACCACCTGAACAATGCAAGCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR CAA 90 bp TTTCTCAAAATCAAAGGAGCTGTCCACAGCCTCAACAGTGATTCTTCTCCTTTTGTGGAAGAAGAACATTaGAGTGACACAGCCACTGAA +
Preference number: 5 (lower is better)
Translates to: FLKIKGAVHSLNSDSSPFVEEEH*SDTATE
Trigger: TTCAGTGGCTGTGTCACTCAAATGTTCTTCTTCCAC...AAAAGGAGAAGAATCACTGTTGAGGCTGTGGACAGCTCCTTTGATTTTGAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR CAA 90 bp TTCTTAATTCTCTCTCCCTTTCTCCATCTGCTGGATCATGGACAGGATTCTGAGTTACCTTCTAATAGATaGAGTGGCACAGGTAAAGGA +
Preference number: 5 (lower is better)
Translates to: FLILSPFLHLLDHGQDSELPSNR*SGTGKG
Trigger: TCCTTTACCTGTGCCACTCAATCTATTAGAAGGTAA...CTCAGAATCCTGTCCATGATCCAGCAGATGGAGAAAGGGAGAGAGAATTAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR CAA 90 bp TGGGCTTGCATTGTTCAGGTGGTCATAAATGGAGTTATTCTTCCCAACTTTTCTATCCCAGGGTTTACCTaGATCATTTCCCTCTTCCTT +
Preference number: 5 (lower is better)
Translates to: WACIVQVVINGVILPNFSIPGFT*IISLFL
Trigger: AAGGAAGAGGGAAATGATCAAGGTAAACCCTGGGAT...AGAAAAGTTGGGAAGAATAACTCCATTTATGACCACCTGAACAATGCAAGCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR CAA 90 bp GTTAGTTACATACATATACATGTGCCATGCTGGTGTGCTGTGCCCATTAACTCGTGCTTCTTAAGAGTCTaGACTTCCATAGGAACATTC +
Preference number: 5 (lower is better)
Translates to: VSYIHIHVPCWCAVPINSCFLRV*TSIGTF
Trigger: GAATGTTCCTATGGAAGTCAAGACTCTTAAGAAGCA...CGAGTTAATGGGCACAGCACACCAGCATGGCACATGTATATGTATGTAACTAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641962.1
CDS-3UTR CAA 90 bp TTTCTCAAAATCAAAGGAGCTGTCCACAGCCTCAACAGTGATTCTTCTCCTTTTTTTATCAGGTTCATCTaGTGTCTGCAAGTCAGTATG +
Preference number: 5 (lower is better)
Translates to: FLKIKGAVHSLNSDSSPFFIRFI*CLQVSM
Trigger: CATACTGACTTGCAGACACAAGATGAACCTGATAAA...AAAAGGAGAAGAATCACTGTTGAGGCTGTGGACAGCTCCTTTGATTTTGAGAAA
40% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR CAA 90 bp TGGGCTTGCATTGTTCAGGTGGTCATAAATGGAGTTATTCTTCCCAACTTTTCTTTTATCAGGTTCATCTaGTGTCTGCAAGTCAGTATG +
Preference number: 5 (lower is better)
Translates to: WACIVQVVINGVILPNFSFIRFI*CLQVSM
Trigger: CATACTGACTTGCAGACACAAGATGAACCTGATAAA...AGAAAAGTTGGGAAGAATAACTCCATTTATGACCACCTGAACAATGCAAGCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR CAA 90 bp TGGGCTTGCATTGTTCAGGTGGTCATAAATGGAGTTATTCTTCCCAACTTTTCTTTACCTTCTAATAGATaGAGTGGCACAGGTAAAGGA +
Preference number: 5 (lower is better)
Translates to: WACIVQVVINGVILPNFSLPSNR*SGTGKG
Trigger: TCCTTTACCTGTGCCACTCAATCTATTAGAAGGTAA...AGAAAAGTTGGGAAGAATAACTCCATTTATGACCACCTGAACAATGCAAGCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR CAA 90 bp TTTCTCAAAATCAAAGGAGCTGTCCACAGCCTCAACAGTGATTCTTCTCCTTTTTTTGGAGAACATTCATaGCTAAAGGAGCTTCTGCAT +
Preference number: 5 (lower is better)
Translates to: FLKIKGAVHSLNSDSSPFFGEHS*LKELLH
Trigger: ATGCAGAAGCTCCTTTAGCAATGAATGTTCTCCAAA...AAAAGGAGAAGAATCACTGTTGAGGCTGTGGACAGCTCCTTTGATTTTGAGAAA
40% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS-3UTR CAA 90 bp TTTCTCAAAATCAAAGGAGCTGTCCACAGCCTCAACAGTGATTCTTCTCCTTTTCTACATTTAATCTTTTaGCAGCAATCTGAATCCCAG +
Preference number: 5 (lower is better)
Translates to: FLKIKGAVHSLNSDSSPFLHLIF*QQSESQ
Trigger: CTGGGATTCAGATTGCTGCAAAAAGATTAAATGTAG...AAAAGGAGAAGAATCACTGTTGAGGCTGTGGACAGCTCCTTTGATTTTGAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS GCA 90 bp TTGCTTCTTAAGAGTCTTGACTTCCATAGGAACATTCTACACATTTaGAGCATTTCTCAAAATTCAGCACAAACAGCTTTTCAGTTTCAG +
Preference number: 5 (lower is better)
Translates to: LLLKSLDFHRNILHI*SISQNSAQTAFQFQ
Trigger: CTGAAACTGAAAAGCTGTTTGTGCTGAATTTTGAGAAATGCTGCAAATGTGTAGAATGTTCCTATGGAAGTCAAGACTCTTAAGAAGCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641962.1
CDS CAA 90 bp CTGCAAGTCAGTATGCCACCACTGGATGAAAGATTACCCAGGTTTTaGATTCAGTCATCCCAGGAGACAAAGTTCTCTCACTGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: LQVSMPPLDERLPRF*IQSSQETKFSHCCC
Trigger: GCAGCAGCAGTGAGAGAACTTTGTCTCCTGGGATGACTGAATCAAAAACCTGGGTAATCTTTCATCCAGTGGTGGCATACTGACTTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641962.1
CDS CAA 90 bp CTGCAAGTCAGTATGCCACCACTGGATGAAAGATTACCCAGGTTTTaGATTCAGTCATCCCAGGAGACAAAGTTCTCTCACTGCTGCTCA +
Preference number: 6 (lower is better)
Translates to: LQVSMPPLDERLPRF*IQSSQETKFSHCCS
Trigger: TGAGCAGCAGTGAGAGAACTTTGTCTCCTGGGATGACTGAATCAAAAACCTGGGTAATCTTTCATCCAGTGGTGGCATACTGACTTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641278.1
CDS TCA 72 bp GTATGCCACCACTGGATGAAAGATTACCCAGGTTTTTaGTTCAGTCATCCCAGGAGACAAAGTTCTCTCACT +
Preference number: 6 (lower is better)
Translates to: VCHHWMKDYPGF*FSHPRRQSSLT
Trigger: AGTGAGAGAACTTTGTCTCCTGGGATGACTGAATCAAAAACCTGGGTAATCTTTCATCCAGTGGTGGCATAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS TCA 72 bp CATCTTGTGTCTGCAAGTCAGTATGCCACCACTGGATaGAAGATTACCCAGGTTTTTGATTCAGTCATCCCA +
Preference number: 6 (lower is better)
Translates to: HLVSASQYATTG*KITQVFDSVIP
Trigger: TGGGATGACTGAATCAAAAACCTGGGTAATCTTTCATCCAGTGGTGGCATACTGACTTGCAGACACAAGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS CAA 72 bp AGTATGCCACCACTGGATGAAAGATTACCCAGGTTTTaGATTCAGTCATCCCAGGAGACAAAGTTCTCTCAC +
Preference number: 6 (lower is better)
Translates to: SMPPLDERLPRF*IQSSQETKFSH
Trigger: GTGAGAGAACTTTGTCTCCTGGGATGACTGAATCAAAAACCTGGGTAATCTTTCATCCAGTGGTGGCATACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641278.1
ENST00000641962.1
CDS GCA 72 bp AAGAGTCTTGACTTCCATAGGAACATTCTACACATTTaGAGCATTTCTCAAAATTCAGCACAAACAGCTTTT +
Preference number: 6 (lower is better)
Translates to: KSLDFHRNILHI*SISQNSAQTAF
Trigger: AAAAGCTGTTTGTGCTGAATTTTGAGAAATGCTGCAAATGTGTAGAATGTTCCTATGGAAGTCAAGACTCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641962.1